BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043637
(693 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/703 (63%), Positives = 548/703 (77%), Gaps = 18/703 (2%)
Query: 1 MAGNAATILKNILSKSSPKP----TPSKT--------------LTKTISGHLKSDEPVSY 42
M NAA++L +L +++ KP T SK L K +S S P +
Sbjct: 1 MGVNAASVLNRLLQRNTHKPKALPTDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPF 60
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
SLYA LFQ+C+S+ AIVEARK+ES+L+TF P PP+FLLNRAIE YGKC LDDAR LF+E
Sbjct: 61 SLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEE 120
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+RDGGSWNAM+ AY Q G + L LF MN G+ AN+IT+A+VL S A L L +S
Sbjct: 121 MPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLS 180
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+HGLIVK GFC NVIL SSLVD YGKC VM+DARRMFD+I+N NA+SWNVIVRRYL
Sbjct: 181 KQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEM 240
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
GN KEAVVMFFKM+R +IRPLNFTF+NAL ACS +S+ EG+QIHGV I+I ++ D+VV
Sbjct: 241 GNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVS 300
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL +MY KCG LE A + + P +N+ISWTSIVSGYA+SG+ REAR LF+EMPER+VI
Sbjct: 301 SSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVI 360
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWNAMLAGYT W+EAL+FVFLMRK T+DID VT+GLILNVCAGLS+++ GK+VHGFI
Sbjct: 361 SWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFI 420
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+R+ SN+FV NALL MY KCGNLRS R+WFYQMS RD++SWNA+LT +AR G SEEA
Sbjct: 421 YRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEA 480
Query: 463 MTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
MT F EMQWET PSKFT TLL+ACANI +LEQGKQIH F+IRN YEI+VV RGALV++Y
Sbjct: 481 MTIFGEMQWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMY 540
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC CLEYA++VFKE+ S D+I+ NSMILG CHN RGR+ L +FGLM++EG+KPDHITF
Sbjct: 541 SKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQ 600
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
GILL CI EG L ++F+SM KY IIP+LEHYE MI+LY R+G+M ELEDF+ RMPF
Sbjct: 601 GILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPF 660
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKI 685
PTV ML ++F+ C ++G++ LG+WAA +LNELNP PF F+I
Sbjct: 661 EPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQI 703
>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/703 (63%), Positives = 548/703 (77%), Gaps = 18/703 (2%)
Query: 1 MAGNAATILKNILSKSSPKP----TPSKT--------------LTKTISGHLKSDEPVSY 42
M NAA++L +L +++ KP T SK L K +S S P +
Sbjct: 1 MGVNAASVLNRLLQRNTHKPKALPTDSKALTTTTVLTHLNAGRLRKAVSILFASPVPFPF 60
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
SLYA LFQ+C+S+ AIVEARK+ES+L+TF P PP+FLLNRAIE YGKC LDDAR LF+E
Sbjct: 61 SLYARLFQICSSNLAIVEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEE 120
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+RDGGSWNAM+ AY Q G + L LF MN G+ AN+IT+A+VL S A L L +S
Sbjct: 121 MPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLS 180
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+HGLIVK GFC NVIL SSLVD YGKC VM+DARRMFD+I+N NA+SWNVIVRRYL
Sbjct: 181 KQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEM 240
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
GN KEAVVMFFKM+R +IRPLNFTF+NAL ACS +S+ EG+QIHGV I+I ++ D+VV
Sbjct: 241 GNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVS 300
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL +MY KCG LE A + + P +N+ISWTSIVSGYA+SG+ REAR LF+EMPER+VI
Sbjct: 301 SSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVI 360
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWNAMLAGYT W+EAL+FVFLMRK T+DID VT+GLILNVCAGLS+++ GK+VHGFI
Sbjct: 361 SWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFI 420
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+R+ SN+FV NALL MY KCGNLRS R+WFYQMS RD++SWNA+LT +AR G SEEA
Sbjct: 421 YRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEA 480
Query: 463 MTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
MT F EMQWET PSKFT TLL+ACANI +LEQGKQIH F+IRN YEI+VV RGALV++Y
Sbjct: 481 MTIFGEMQWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMY 540
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC CLEYA++VFKE+ S D+I+ NSMILG CHN RGR+ L +FGLM++EG+KPDHITF
Sbjct: 541 SKCRCLEYALKVFKEAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQ 600
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
GILL CI EG L ++F+SM KY IIP+LEHYE MI+LY R+G+M ELEDF+ RMPF
Sbjct: 601 GILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDELEDFIKRMPF 660
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKI 685
PTV ML ++F+ C ++G++ LG+WAA +LNELNP PF F+I
Sbjct: 661 EPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQI 703
>gi|255578455|ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 718
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/699 (62%), Positives = 547/699 (78%), Gaps = 17/699 (2%)
Query: 4 NAATILKNILS----KSSPKPTPSKTLTKTISGHLK-------------SDEPVSYSLYA 46
+A++IL ILS K+ KPT SK LT TI HLK S+ V YSLYA
Sbjct: 2 SASSILNRILSNNTCKTQTKPTKSKALTNTIINHLKANRLQKAVSILFASNSSVPYSLYA 61
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
LFQLC+S+ +IVEARK+ES+L+TF PTPP+FLLNRAIE YGKC L DAR LFDEMP+R
Sbjct: 62 SLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQR 121
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
DGGSWNA++ AYTQ G+ + L LF DMN GV AN+IT+A+VL+S ++ L+L +S+Q+H
Sbjct: 122 DGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIH 181
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
GLIVK GFCGNVIL S+LVD YGKC VM++AR MF++I+N N V+WNVIVRRYL GN +
Sbjct: 182 GLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNER 241
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EAV MFFKM + D+RPLNFTF+NAL ACS + + EGMQIH IKI FE D+ V SL+
Sbjct: 242 EAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLS 301
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY KCG+LE AR + DQ R++ISWTS+VS YA+SGR REARELF +MPE +V+SWNA
Sbjct: 302 NMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMPEWSVVSWNA 361
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
MLAGY RSL W+EALDFV LMR+TT+DID +TLGL+LNVCAG+S+++MGK+ HGFI+R+
Sbjct: 362 MLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGFIYRHG 421
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+SS I V NALLDMY KCGNLRSAR+WFYQMSQ RD +SWNA+LT YAR QSE+AM F
Sbjct: 422 FSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMIF 481
Query: 467 SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EMQWET+PS FTF TLLAACANI +L+QGK+IH F+IRN Y ++ V GALV++Y+KC
Sbjct: 482 GEMQWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVISGALVDMYSKCR 541
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
CL YA+ VF + S DVI+ NS+ILG CHN RG+E L++FG M+KEG+KPDH+TFHG+LL
Sbjct: 542 CLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLFGQMEKEGVKPDHVTFHGVLL 601
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC++EG+VKLA+++F+SM K +IP+LEHYECMI+L+ RY M LE+FV MPF+PT
Sbjct: 602 ACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSRYRCMSRLENFVKGMPFDPTA 661
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKI 685
ML ++FD C+++G + +W A +LN+LNP QF+I
Sbjct: 662 SMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQFQI 700
>gi|224066771|ref|XP_002302207.1| predicted protein [Populus trichocarpa]
gi|222843933|gb|EEE81480.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/700 (59%), Positives = 537/700 (76%), Gaps = 17/700 (2%)
Query: 4 NAATILKNILSKSS----PKPTPSKTLTKTISGHLK-------------SDEPVSYSLYA 46
+ A+IL ++LS + +P K LTK I HL+ S + +YSLYA
Sbjct: 2 SGASILSSLLSNKTLNLQTRPANVKALTKQILSHLEANRLKQAVSILFASPDCFAYSLYA 61
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
HLFQ+C+SS AIVEARK+ES L+ PTPP FLLNRAI+ YGKC L+DA+ LFDEMP+R
Sbjct: 62 HLFQVCSSSLAIVEARKVESQLLGACPTPPTFLLNRAIDTYGKCRCLEDAKELFDEMPQR 121
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
DGGSWNAM+ A Q P + L F DM+ GV AN++T+++ LR+ + LEL +S+Q+H
Sbjct: 122 DGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALRACGDVLELCLSRQIH 181
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
GLIVK GFCGNVI+ SSLVD YGKC M+++RR+FD+I+N N V+WN+IVRRYL G+
Sbjct: 182 GLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPNNVTWNIIVRRYLEVGDEN 241
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EAVVMFFKM R +RPL++TF+NAL ACS + + EGMQIHGV KI+FE ++VVL SL
Sbjct: 242 EAVVMFFKMFRAKLRPLSYTFSNALVACSDMRAVKEGMQIHGVATKINFEEEEVVLSSLI 301
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+MYVKCG +E AR + D P R++ISWTS+VS YA+SGR+REARELF+EMPERN++S+NA
Sbjct: 302 DMYVKCGEIESARRVFDLPGSRDLISWTSMVSAYAMSGRMREARELFDEMPERNMVSYNA 361
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+LAGY RSL W+EALDFV+LM +TT++ID +T L+LNVC+GLS++ MGK+VHGFI+R+
Sbjct: 362 LLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCSGLSDVDMGKQVHGFIYRHG 421
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ SN + NALLDMY KCGNLRSA +WF+QM Q RD VSWN +LT YARR SE+AM+ F
Sbjct: 422 WLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSIF 481
Query: 467 SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EMQWET+P KF F TLLAACAN +L+QGKQIH F+IRN Y+I+ V GAL+++Y+KC
Sbjct: 482 REMQWETKPHKFIFATLLAACANTFALDQGKQIHGFMIRNGYDIDTVIAGALLDMYSKCR 541
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
CLEYA+ VF+E+ D+++ NSMILG CH RG+ AL +FG M++EG KPD++TF GILL
Sbjct: 542 CLEYALIVFREADKRDLVLWNSMILGCCHLGRGKLALRLFGFMEEEGTKPDNVTFQGILL 601
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC++EG+V LA Q+F+SM KY IIP+LEHYEC+I+L RYG MKELE+F+ MPF+PT
Sbjct: 602 ACVYEGHVDLARQYFNSMSSKYCIIPRLEHYECIIELLSRYGCMKELENFIKDMPFDPTA 661
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
PML ++ D C+++ LGEWAA+RL+EL+P P F+I
Sbjct: 662 PMLTRVVDACKEHQCWRLGEWAAKRLDELSPSVPLPFEIA 701
>gi|449453101|ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/694 (59%), Positives = 526/694 (75%), Gaps = 18/694 (2%)
Query: 1 MAGNAATILKNILSKSS----PKPTPSKTLTKTISGHLK-------------SDEPVSYS 43
M +AA+IL +LS+ + + T + T TI +L+ S P ++
Sbjct: 1 MGVSAASILNRLLSRKNLTARSEFTDANAATSTILRYLEEGRLGKAVLILFNSPFPFPHT 60
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
LY LFQLC+S++A+VEARK+ES+L TF PTPP+FLLNRAIE YGKCG L DAR LFDEM
Sbjct: 61 LYTRLFQLCSSTRALVEARKVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEM 120
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+RDGGSWNAM+ AYTQNG+ L L+LD+N SGV A ++T A++LRS L L S+
Sbjct: 121 PQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALHFSR 180
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HG IVK GF GNVILESSLVD YGKC +M DAR MFD+IQN+N VSWNVIVRRYL G
Sbjct: 181 QIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLEVG 240
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
NGKEAV MFF+M RE + P +FTF+NAL ACS +++ EG QIHG+++K+ E ++V+
Sbjct: 241 NGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENEVISS 300
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MYVKCG L +A + QP RN+ISWTS+V YA SG + +ARELFNEMPERNVIS
Sbjct: 301 SLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPERNVIS 360
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAMLAGY S W+EAL+FV LMR + KDID+ TL LILNVC G S+++ GK+VHGF++
Sbjct: 361 WNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVY 420
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R + +N+++ NALLDMY KCGNL+SA++WFYQMSQ RDKVSWNA+LT +AR G SE+AM
Sbjct: 421 RTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAM 480
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
T FSEMQ ET P+ FTF TLL ACAN+ +LE GKQIH F++RN Y I++V GALV++Y
Sbjct: 481 TIFSEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYC 540
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK-KEGIKPDHITFH 582
KC L+YA++VF+ +S DV++ NS+ILG CHN R A+++F LM +EGIKPDH+TF
Sbjct: 541 KCRELKYALKVFEHVASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQ 600
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
GILLAC+HE V+L ++FDSM K+ +IP+LEHYECM++LY ++G M ELE F+N MPF
Sbjct: 601 GILLACLHENLVELGRKYFDSMSEKFCVIPRLEHYECMVELYGQHGNMDELEKFINNMPF 660
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+PTVPML +IF+ CR++G++ L EW A RLNE N
Sbjct: 661 DPTVPMLERIFNACREHGHSRLAEWVAIRLNEQN 694
>gi|356507622|ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/696 (56%), Positives = 504/696 (72%), Gaps = 21/696 (3%)
Query: 1 MAGNAATILKNILSKSSPKPTP-------SKTLTKTISGHLKS-------------DEPV 40
M +AA+IL +L K + KP P + + TI +LK+ +P
Sbjct: 1 MGVSAASILNQLLRKQNLKPHPHSQTQPATNAVINTILTYLKAGRIRKATSILFAFPKPF 60
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+SLYA F+LC+S +A+VEARK+ES+L+TF P PP FLLNRAIE Y KC L DAR LF
Sbjct: 61 PFSLYALFFRLCSSHRAVVEARKVESHLLTFSPNPPTFLLNRAIEAYAKCHCLRDARELF 120
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
DEMP+ DGGSWNA++ AY+Q GFP T LFL M SG ++T+A+VL S A EL
Sbjct: 121 DEMPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVTFASVLASCAASSELL 180
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+SKQ+HGL+ K GFCGNVIL SSLVD YGKC VM DARRMF +I NAV+WNVIVRRYL
Sbjct: 181 LSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYL 240
Query: 221 VAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
AG+ KEAV MF +M +RP+NFTF+NAL ACS +S+ EG+QIHGV++K+ D+
Sbjct: 241 DAGDAKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDN 300
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
VV SL MYVKCGRLED + DQ R+++ WTSIVSGYA+SG+ EARE F+EMPER
Sbjct: 301 VVSSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPER 360
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
NVISWNAMLAGYT+ W +ALDFV+LM KD+D VTLGL+LNV AG+S+ +MGK+VH
Sbjct: 361 NVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVH 420
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G+I+R+ + S++ +SNALLDMY KCGNL S R+WF QMS RRD+VSWNA+L Y + S
Sbjct: 421 GYIYRHGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLS 480
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
E+A+T FS+MQWET+P+++TF TLL ACAN +L GKQIH F+IR+ + I+ V R ALV
Sbjct: 481 EQALTMFSKMQWETKPTQYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALV 540
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y KC CLEYAI V K + S DVII N++I+G HN +G+EALE+F +M+ EGIKPDH+
Sbjct: 541 YMYCKCRCLEYAIEVLKRAVSRDVIIWNTIIMGCVHNHKGKEALELFVIMEAEGIKPDHV 600
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF GILLACI EG V+ F SM ++ ++P++EHY+CMI+LY R+ YM ELE+F+
Sbjct: 601 TFKGILLACIEEGLVEFGTGCFKSMSSEFHVLPRMEHYDCMIELYSRHRYMDELENFMRT 660
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
M PT+PML+++ D C+KN LGEW A ++NE
Sbjct: 661 MTMEPTLPMLKRVLDVCQKNECPRLGEWIAEKINEF 696
>gi|297818196|ref|XP_002876981.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322819|gb|EFH53240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/649 (55%), Positives = 476/649 (73%)
Query: 26 LTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE 85
++K +S S EPV Y LY LF+ C+S +V+ARK++S+LVTF P PP FLLNRAIE
Sbjct: 45 VSKAVSVLFASPEPVGYWLYERLFRSCSSKSLVVQARKVQSHLVTFSPLPPSFLLNRAIE 104
Query: 86 CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQIT 145
YGKCG +DDAR LF++MPERDGGSWNA++ A QNG +F MN GV A + +
Sbjct: 105 AYGKCGCVDDARELFEQMPERDGGSWNAVITACAQNGVSDEVFRMFHRMNRDGVRATETS 164
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+A VL+S L+L + QLH +VK G+ GN+ LE+S+VD YGKC VM+DARR+FD+I
Sbjct: 165 FAGVLKSCGLVLDLRLLMQLHCAVVKYGYSGNIDLETSIVDVYGKCQVMSDARRVFDEIV 224
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
N + VSWNVIVRRYL G EAVVMFFKML ++RPLN T ++ + ACS + G
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV 284
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IH + +KI D VV S+ +MYVKC RLE AR + DQ +++ SWTS +SGYA+SG
Sbjct: 285 IHAIAVKISVVADTVVSTSIFDMYVKCDRLESARRVFDQTKSKDLKSWTSAMSGYAMSGI 344
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
REARELF+ MPERN++SWNAML GY R+ W +ALDF+ LMRK +DID VTL ILNV
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVRAHEWDDALDFLTLMRKEIEDIDNVTLVWILNV 404
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C+G+S+++MGK+ HGFI+R+ Y N+ V+NALLDMY KCG L+SA IWF QMS+ RD+VS
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDMNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
WNA+LTG AR G+SE+A++ F MQ E +PSK+T TLLA CANI +L GK IH F+IR
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQMEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
N Y I+VV RGA+V++Y+KC C +YAI VFKE+++ D+I+ NS+I G C N R +E E+
Sbjct: 525 NGYNIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F L++ EG+KPDH+TF IL ACI EG+V+L Q+F SM KY I+PQ+EHY+CM++LYC
Sbjct: 585 FMLLEDEGVKPDHVTFSAILQACIREGHVELGFQYFSSMSTKYLILPQIEHYDCMVELYC 644
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+YG +++LE+F+ MPF+P + ML I D C++ ++ LG WAA+RL E
Sbjct: 645 KYGCLRQLEEFLLLMPFDPPMQMLTMINDACQRYRWSKLGAWAAKRLYE 693
>gi|15231572|ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26540
gi|9293933|dbj|BAB01836.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643655|gb|AEE77176.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 700
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/670 (54%), Positives = 486/670 (72%), Gaps = 5/670 (0%)
Query: 3 GNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEAR 62
G T+ + IL + ++K +S S EPVSY LY LF+ C+S +V+AR
Sbjct: 27 GTKLTVTRQIL-----EHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQAR 81
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
K++S+LVTF P PP+FLLNRAIE YGKCG +DDAR LF+EMPERDGGSWNA++ A QNG
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+F MN GV A + ++A VL+S L+L + +QLH +VK G+ GNV LE+
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLET 201
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
S+VD YGKC VM+DARR+FD+I N + VSWNVIVRRYL G EAVVMFFKML ++RP
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
LN T ++ + ACS + G IH + +K+ D VV S+ +MYVKC RLE AR +
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
DQ +++ SWTS +SGYA+SG REARELF+ MPERN++SWNAML GY + W EALD
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD 381
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
F+ LMR+ ++ID VTL ILNVC+G+S+++MGK+ HGFI+R+ Y +N+ V+NALLDMY
Sbjct: 382 FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYG 441
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET 482
KCG L+SA IWF QMS+ RD+VSWNA+LTG AR G+SE+A++ F MQ E +PSK+T T
Sbjct: 442 KCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLAT 501
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LLA CANI +L GK IH F+IR+ Y+I+VV RGA+V++Y+KC C +YAI VFKE+++ D
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD 561
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+I+ NS+I G C N R +E E+F L++ EG+KPDH+TF GIL ACI EG+V+L Q+F
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
SM KY I PQ+EHY+CMI+LYC+YG + +LE+F+ MPF+P + ML +I D C++ ++
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 663 TLGEWAARRL 672
LG WAA+RL
Sbjct: 682 KLGAWAAKRL 691
>gi|115458508|ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza sativa Japonica Group]
gi|113564425|dbj|BAF14768.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa Indica Group]
gi|215704891|dbj|BAG94919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 298/662 (45%), Positives = 420/662 (63%), Gaps = 9/662 (1%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF--------YPTPPVFLLNRAIECY 87
S V ++YA L +L S +++ AR++ ++L + + FL NRA+E
Sbjct: 38 SSSQVPSAVYASLLRLATSHRSLAAARRIATHLASSTAPSTSHSFTATSTFLFNRAVESL 97
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
CG+L DAR LFD MP RDGGSWNA++ AY++ P + LF MN GV +T A
Sbjct: 98 AACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNSCGVRPKDVTLA 157
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+VL AE L+L ++QLHG I KR F NVIL ++LVD YGKC +++ARR FD I
Sbjct: 158 SVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKP 217
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N +SWNVI+RRYL+AG G A+ MFF+M+ + PL +T + AL AC + EG +IH
Sbjct: 218 NDISWNVIIRRYLLAGMGDMAIDMFFRMVWAGVSPLVYTVSQALLACRDNGALEEGRRIH 277
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
+++ +E V S+ +MY KCG ++ A+ L D ++I+ TSIVSG A GRI
Sbjct: 278 TFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCGRIT 337
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+A+ +F M E N++SWNAML GY RS+ AL MR+ TK++D VTLG +LN C
Sbjct: 338 DAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQMRQETKELDAVTLGCVLNACT 397
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSW 446
GL ++ G+EVH F ++ + F+ NALL MY KCG LRSA R+ ++M RD SW
Sbjct: 398 GLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCGCLRSAERLLLFEMGSERDSYSW 457
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
N++++GY R SE A+ + SEM +E P++ TF + LAACANI L GKQIH ++IRN
Sbjct: 458 NSLISGYERHSMSEAALLALSEMHYEATPNQSTFSSALAACANIFLLNHGKQIHAYMIRN 517
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
Y I+ + + AL+++Y+KC +Y++R+F+ S DVI+ NSMI G +N +G LE+F
Sbjct: 518 GYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLELF 577
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M K+GI PD +TF G L++CI EG+V L +F M +Y I+P++EHYECMI+L +
Sbjct: 578 FEMSKQGITPDSVTFLGALVSCISEGHVGLGRSYFTQMTDEYNIVPRIEHYECMIELLGK 637
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
+GYM ELEDF+ MPF PT M +IFD CR+ G LGE AA+ +N+ NP P +F+I
Sbjct: 638 HGYMVELEDFIGHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQCINDSNPLTPVRFEIA 697
Query: 687 TN 688
+
Sbjct: 698 PD 699
>gi|222628911|gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 298/662 (45%), Positives = 420/662 (63%), Gaps = 9/662 (1%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF--------YPTPPVFLLNRAIECY 87
S V ++YA L +L S +++ AR++ ++L + + FL NRA+E
Sbjct: 38 SSSQVPSAVYASLLRLATSHRSLAAARRIATHLASSTAPSTSHSFTATSTFLFNRAVESL 97
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
CG+L DAR LFD MP RDGGSWNA++ AY++ P + LF MN GV +T A
Sbjct: 98 AACGSLTDARKLFDAMPRRDGGSWNAIISAYSRGEEPTEAISLFSAMNSCGVRPKDVTLA 157
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+VL AE L+L ++QLHG I KR F NVIL ++LVD YGKC +++ARR FD I
Sbjct: 158 SVLGCCAECLDLHGARQLHGHIAKRDFQSNVILGTALVDVYGKCFALSEARRAFDGIPKP 217
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N +SWNVI+RRYL+AG G A+ MFF+M+ + PL +T + AL AC + EG +IH
Sbjct: 218 NDISWNVIIRRYLLAGMGDLAIDMFFRMVWAGVSPLVYTVSQALLACRDNGALEEGRRIH 277
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
+++ +E V S+ +MY KCG ++ A+ L D ++I+ TSIVSG A GRI
Sbjct: 278 TFVLRHGYEQHVHVRSSVVDMYAKCGAIDLAQRLFDLAPVKDIVMSTSIVSGLASCGRIT 337
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+A+ +F M E N++SWNAML GY RS+ AL MR+ TK++D VTLG +LN C
Sbjct: 338 DAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQMRQETKELDAVTLGCVLNACT 397
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSW 446
GL ++ G+EVH F ++ + F+ NALL MY KCG LRSA R+ ++M RD SW
Sbjct: 398 GLLDLGKGEEVHTFAFKSGFIGYPFLKNALLRMYSKCGCLRSAERLLLFEMGSERDSYSW 457
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
N++++GY R SE A+ + SEM +E P++ TF + LAACANI L GKQIH ++IRN
Sbjct: 458 NSLISGYERHSMSEAALLALSEMHYEATPNQSTFSSALAACANIFLLNHGKQIHAYMIRN 517
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
Y I+ + + AL+++Y+KC +Y++R+F+ S DVI+ NSMI G +N +G LE+F
Sbjct: 518 GYVIDDILQSALIDMYSKCRLFDYSMRIFEAGPSQDVILWNSMIFGCAYNGKGEYGLELF 577
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M K+GI PD +TF G L++CI EG+V L +F M +Y I+P++EHYECMI+L +
Sbjct: 578 FEMSKQGITPDSVTFLGALVSCISEGHVGLGRSYFTQMTDEYNIVPRIEHYECMIELLGK 637
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
+GYM ELEDF+ MPF PT M +IFD CR+ G LGE AA+ +N+ NP P +F+I
Sbjct: 638 HGYMVELEDFIGHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQCINDSNPLTPVRFEIA 697
Query: 687 TN 688
+
Sbjct: 698 PD 699
>gi|242075864|ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
gi|241939051|gb|EES12196.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
Length = 714
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 298/654 (45%), Positives = 421/654 (64%), Gaps = 9/654 (1%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPT--------PPVFLLNRAIECYGKCGNLD 94
SLYA L +L S +++ AR++ S+L + + P FL NRAIE CG+L
Sbjct: 44 SLYASLLRLATSRRSLAAARRVASHLASSSSSSPSTSTSFAPTFLFNRAIESLAACGSLA 103
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DAR +FD MP RDGGSWNA++ A ++ G P LF MN G+ +T A+VL A
Sbjct: 104 DAREMFDAMPRRDGGSWNAIISASSRAGHPAEAFSLFAGMNSLGIRPKDVTLASVLACCA 163
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E L+L ++QLHG I KR F NVIL ++LVD YGKC+++TDARR FDDI N +SWNV
Sbjct: 164 ECLDLRGAQQLHGHIAKRDFQSNVILGTALVDVYGKCLLLTDARRAFDDILQPNDISWNV 223
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+RRYL+AG G AV MFF+M+ IRPL +T +A+ AC + EG IH +++
Sbjct: 224 IIRRYLLAGMGDMAVHMFFRMVWAGIRPLVYTVTHAMLACRDNGALKEGRCIHTFVLRHG 283
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+E V S+ +MY KCG ++ A L + ++++++ TS+VSG A GRI +A+ +F+
Sbjct: 284 YEHHVHVRSSVVDMYAKCGDIDAALRLFNLAPKKDVVTSTSVVSGLAACGRIADAKRVFD 343
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
M + N++SWNAML G +S+ ALD MR TK++D VTLG +LN C GL ++
Sbjct: 344 GMEQHNLVSWNAMLTGCVKSMDLTGALDLFQQMRHETKELDVVTLGSVLNACTGLLDLGK 403
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVLTGY 453
G+E+H + S F+ NAL+ +Y KCG LR+A R+ ++M R++ SWN++++GY
Sbjct: 404 GEELHALALKCGLFSYPFLMNALVRLYSKCGCLRNAERLLLFEMGSERERFSWNSLISGY 463
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
R SE A+ + EMQ E +PS+ TF + LAACANI L GKQIH ++IRN Y+I+ +
Sbjct: 464 ERHSMSEAALHALREMQSEAKPSQSTFSSALAACANIFLLNHGKQIHAYMIRNGYDIDDI 523
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
R ALV++Y+KC +Y+ R+F+ S DVI+ NSMI +N +G LE+F M+K+G
Sbjct: 524 LRSALVDMYSKCSLFDYSSRIFELGLSNDVILWNSMIFACAYNSKGDYGLELFDEMRKQG 583
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I+PD +TF G L++CI EG+V L +F M +Y IIP++EHYECMI+L ++GYM EL
Sbjct: 584 IRPDSVTFLGALVSCICEGHVGLGRSYFTLMTDEYSIIPRIEHYECMIELLGKHGYMVEL 643
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
EDFV+ MPF PT M +IFD CR+ G LGE AA+R+N+ P P F +T
Sbjct: 644 EDFVDHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQRINDRKPLTPVIFFEST 697
>gi|413918391|gb|AFW58323.1| hypothetical protein ZEAMMB73_367038 [Zea mays]
Length = 711
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 299/690 (43%), Positives = 432/690 (62%), Gaps = 18/690 (2%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHL---------KSDEPVSYSLYAHLFQLCASSKAIVEAR 62
+++ S+ T S T +GHL S + SLYA L +L S +++ AR
Sbjct: 1 MVAASTAVSTVSAISTHIAAGHLFAAIDALPSCSASLLPPSLYASLLRLATSRRSLAAAR 60
Query: 63 KLESNLVTFYPT--------PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
++ S+L + P FL NRAIEC CG+L DAR +FD MP RDGGSWNA+
Sbjct: 61 RIASHLASSSSASPSTSVSFTPTFLFNRAIECLAACGSLADAREMFDAMPRRDGGSWNAI 120
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ A ++ G P LF DMN G+ +T A+VL AE L+L ++QLHGLI KR F
Sbjct: 121 ISASSRAGHPAEAFSLFADMNSLGIRPKDVTLASVLACCAECLDLRGAQQLHGLIAKRDF 180
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
NVIL ++LVD YGKC+ +TD RR FDDI N VSWN+I+RRY +AG G A+ MFF
Sbjct: 181 QSNVILGTALVDVYGKCLSLTDVRRAFDDILQPNDVSWNIIIRRYRLAGMGDMALHMFFM 240
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M+R +RPL +T A+A+ AC + EG IH +++ ++ S+ +MY KCG
Sbjct: 241 MVRAGVRPLVYTVAHAMLACRDNCALKEGKCIHSFVLRRGYDHHIHARSSVVDMYAKCGD 300
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
++ A+ L + +++++ TS+VSG A GRI +A+ +F+ M + N++SWNAML GY +S
Sbjct: 301 IDAAQRLFNLAPKKDVVMSTSVVSGLAACGRIADAKMVFDGMEQHNLVSWNAMLTGYVKS 360
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
+ ALD MR TK++D VTL +LN C GL ++ G+E+H + S F
Sbjct: 361 MDLTGALDLFQQMRHETKELDVVTLASVLNACTGLLDLGKGEELHALALKCGLFSCPFFR 420
Query: 415 NALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
NAL+ +Y KCG LR+A R+ ++M RD+ +WN++++GY R SE+A+ + EMQ E
Sbjct: 421 NALVRLYSKCGCLRTAKRLLLFEMGSERDRYAWNSIISGYERHSMSEDALHALREMQSEA 480
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+PS+ TF + LAACANI L+ GKQIH ++IRN Y+I+ + R ALV++Y+KC +Y+ R
Sbjct: 481 KPSQSTFSSALAACANIFLLKHGKQIHAYMIRNRYDIDDILRSALVDMYSKCRLFDYSTR 540
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F+ SS DVI+ NSMI ++ +G L + M+K+G++PD +TF G L++CI EG+
Sbjct: 541 IFELGSSDDVILWNSMIFACAYHSKGDYGLGLLDEMRKQGVRPDSVTFLGALVSCICEGH 600
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V L +F M +Y I+P++EHYECMI+L ++GYM ELEDFV+ MPF PT M +IF
Sbjct: 601 VGLGRSYFTLMIDEYSIVPRIEHYECMIELLGKHGYMVELEDFVDHMPFEPTTAMWLRIF 660
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQF 683
D CR+ G LG+ AA+R+N+ P P F
Sbjct: 661 DCCREYGNRKLGQRAAQRINDSKPLTPVIF 690
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 1430
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/653 (45%), Positives = 414/653 (63%), Gaps = 9/653 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTP-------PVFLLNRAIECYGKCGNLDDA 96
LYA L +L S ++ AR++ ++L P FL NRAIE CG++ DA
Sbjct: 45 LYASLLRLATSHGSLSAARRIATHLAASSSASSTSRSSVPTFLFNRAIESLAACGSVADA 104
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
R LFD MP RDGGSWNA++ A ++ G P L LF +MN G+ T A+VL AE
Sbjct: 105 RELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAEC 164
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L+L ++QLHG I KR F NVIL ++LVD YG C ++ DARR FDDI NA+SWNVIV
Sbjct: 165 LDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIV 224
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
RRY +AG G AV MFF+ML +RPL +T ++A+ AC ++ EG IH +++ +E
Sbjct: 225 RRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYE 284
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V S+ +MY KCG ++ A+ L + ++++ TSIVSG A GRI +A+ +F M
Sbjct: 285 HHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGM 344
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
ERN++SWNAML GY RS+ AL MR+ T++ D +TLG +L+ C G+ +I G+
Sbjct: 345 KERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGE 404
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYAR 455
EVH F + + S+ + NAL+ MY KCG LRSA R+ ++M RD SWN++++GY R
Sbjct: 405 EVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYER 464
Query: 456 RGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
SE A+ + ++MQ E P++ TF + LAACANI L+QG QIH ++IR YEI+ + R
Sbjct: 465 HSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR 524
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
L+++Y KC +Y+IR+F+ S DVI+ NSMI G ++ +G L++F M+K+GIK
Sbjct: 525 SVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIK 584
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
D +TF G L++CI EG+V+L +F M IIP++EHYECMI+L ++G M ELED
Sbjct: 585 ADSVTFLGALVSCISEGHVRLGRSYFTLMM-DESIIPRIEHYECMIELLGKHGCMVELED 643
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
FV MPF PT M +IFD CR+ G LGE AA+ +N+ NP P QF T +
Sbjct: 644 FVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVD 696
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/590 (28%), Positives = 283/590 (47%), Gaps = 100/590 (16%)
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA- 228
+K F L ++LV AY + + DARR+FD+I + N S+N ++ + G +A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 229 -----------------------------VVMFFKMLREDIRPLN-FTFANALFACSFLS 258
++F + D LN ++FA+AL AC+
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G+Q+H ++ K D + +L +MY KC W
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKC-------------------EWP---- 943
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
EAR +F MPERN++SWN+++ Y ++ EAL M K D+VT
Sbjct: 944 --------EEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVT 995
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
L +++ CAGL+ + G++VH + ++D + ++ +SNAL+DMY KCG R+AR F +M
Sbjct: 996 LASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRM 1055
Query: 438 SQR------------------------------RDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ R ++ ++WN ++ YA+ G+ EEA+ F
Sbjct: 1056 ASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFV 1115
Query: 468 EMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY------EINVVCRGALVE 520
++ E+ P+ +T+ +L AC N++ L+ G+Q H V++ + E +V +LV+
Sbjct: 1116 RLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 1175
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y K ++ +VF+ ++ D + N+MI+G N R ++AL +F M PD +T
Sbjct: 1176 MYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVT 1235
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
G+L AC H G V+ ++F SM +GIIP +HY CMI L R G++KE+E+ + M
Sbjct: 1236 MIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEM 1295
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + CR + +GEWAA +L EL+P + + +N +
Sbjct: 1296 SMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMY 1345
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 242/434 (55%), Gaps = 9/434 (2%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P P F N + + + G DAR LF +P+ D S+NA++ A Q+ L
Sbjct: 822 PHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLA 881
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M+ N ++A+ L + A E + Q+H L+ K +V + S+L+D Y KC
Sbjct: 882 AMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCE 941
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ARR+F+ + +N VSWN ++ Y G EA+V+F M++ P T A+ +
Sbjct: 942 WPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMS 1001
Query: 253 ACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC+ L++ EG Q+H ++K D F D V+ +L +MY KCGR AR + D+ R+++
Sbjct: 1002 ACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVV 1061
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S TS+++GYA S + +A+ +F++M E+NVI+WN ++A Y ++ +EAL +++ +
Sbjct: 1062 SETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRES 1121
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY------SSNIFVSNALLDMYRKCG 425
T G +LN C ++++++G++ H + + + S++FV N+L+DMY K G
Sbjct: 1122 VWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 1181
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLL 484
++ F +M+ RD VSWNA++ G+A+ G++++A+ F M + P T +L
Sbjct: 1182 SIDDGAKVFERMAA-RDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVL 1240
Query: 485 AACANISSLEQGKQ 498
+AC + +E+G++
Sbjct: 1241 SACGHSGLVEEGRR 1254
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
F P VF+ N ++ Y K G++DD +F+ M RD SWNAM+ + QNG L L
Sbjct: 1161 FGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHL 1220
Query: 131 FLDMNHSGVSANQITYANVLRS 152
F M S S + +T VL +
Sbjct: 1221 FERMLCSKESPDSVTMIGVLSA 1242
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/683 (32%), Positives = 362/683 (53%), Gaps = 46/683 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S S Y+ L C ++K++ ++ +++ + + N I Y KC AR
Sbjct: 54 PTSVS-YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
L DE E D SW+A++ Y QNG G L F +M+ GV N+ T+++VL++ + +
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + KQ+HG++V GF G+V + ++LV Y KC D++R+FD+I +N VSWN +
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ EAV +F++M+ I+P F+ ++ + AC+ L G IHG +IK+ ++ D
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG------------------- 319
+L +MY K G L DA + ++ + +I+SW ++++G
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Query: 320 ------------------------YAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
Y+ + +AR FN +PE+++I+WNA+++GY++
Sbjct: 353 QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYW 412
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
EAL M K +Q TL IL AGL + + ++VHG ++ + S+I+V N
Sbjct: 413 EDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 472
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETR 474
+L+D Y KC ++ A F + + D VS+ +++T YA+ GQ EEA+ F EMQ E +
Sbjct: 473 SLIDSYGKCSHVEDAERIFEECT-IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK 531
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P +F +LL ACAN+S+ EQGKQ+H +++ + +++ +LV +Y KC ++ A R
Sbjct: 532 PDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 591
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E + ++ ++MI G + GR+AL++F M KEG+ P+HIT +L AC H G V
Sbjct: 592 FSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLV 651
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
A +F+SM +G P EHY CMI L R G + E + VN+MPF + +
Sbjct: 652 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 711
Query: 655 KCRKNGYATLGEWAARRLNELNP 677
R + LG AA L L P
Sbjct: 712 AARIHKDVELGRRAAEMLFILEP 734
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 40/387 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
++++N I+ YGKC +++DA +F+E D S+ +M+ AY Q G L+LFL+M
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ ++ +++L + A KQLH I+K GF ++ +SLV+ Y KC + D
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDD 587
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A R F ++ + VSW+ ++ G+G++A+ +F +ML+E + P + T + L AC+
Sbjct: 588 AGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 647
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLG--SLTEMYV-------KCGRLEDARGLLDQ-PD 306
E K+ FE + + G + E Y + G++ +A L+++ P
Sbjct: 648 AGLVTEA--------KLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPF 699
Query: 307 ERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAG-YTRSLLWKEAL 361
E N W +++ I + R A LF PE++ + +LA Y + W+
Sbjct: 700 EANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKS--GTHVLLANIYASAGKWENVA 757
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI--HRNDY-SSNIFVS-NAL 417
+ LMR + + G+S I++ +V+ F+ R+ Y S I+ + L
Sbjct: 758 EVRRLMRDSKVKKE-----------PGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDEL 806
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKV 444
D+ K G + I + + Q ++
Sbjct: 807 SDLMDKAGYVPMVEIDLHDVEQSEKEL 833
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/646 (32%), Positives = 342/646 (52%), Gaps = 34/646 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H K + SY Y L Q C +K + +++ +++ F P V+++N ++ Y CG+
Sbjct: 36 HQKGSQVDSYD-YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+++AR LFD+ + SWN M+ Y G LF M G+ ++ T+ ++L +
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L +++H +++ G N + ++L+ Y KC + DARR+FD + +++ VSW
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
+ Y +G +E++ + ML+E +RP T+ N L AC L++ +G QIH I++
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVE 274
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ D V +LT+MY+KCG ++DA RE+
Sbjct: 275 SEHHSDVRVSTALTKMYIKCGAVKDA-------------------------------REV 303
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F +P R+VI+WN M+ G S +EA M K D+VT IL+ CA +
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
GKE+H ++ S++ NAL++MY K G+++ AR F +M +RD VSW A++ G
Sbjct: 364 ACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGG 422
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
YA GQ E+ ++F +M Q +K T+ +L AC+N +L+ GK+IH V++ +
Sbjct: 423 YADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFAD 482
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+ AL+ +Y KC +E AIRV + S+ DV+ N++I G N RG EAL+ F +MK
Sbjct: 483 LAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKS 542
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
E ++P+ TF ++ AC V+ + F SMR YGI+P +HY CM+ + R G++
Sbjct: 543 EEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLG 602
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
E ED + MPF P+ M + CR +G +GE AA + +L P
Sbjct: 603 EAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEP 648
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 247/500 (49%), Gaps = 34/500 (6%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
++ G + Y +L+S + +L V KQ+H I++ G NV + ++L+ Y C
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ +ARR+FD NK+ VSWNV++ Y G G+EA +F M +E + P FTF + L A
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS ++ G ++H +++ + V +L MY KCG + DAR + D R+ +SW
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T++ YA SG +E+ + ++ M + V
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRP------------------------------ 244
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++T +L+ C L+ ++ GK++H I +++ S++ VS AL MY KCG ++ AR
Sbjct: 245 -SRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F + RD ++WN ++ G GQ EEA F M E P + T+ +L+ACA
Sbjct: 304 FECLPN-RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGG 362
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GK+IH +++ +V AL+ +Y+K ++ A +VF DV+ +++ G
Sbjct: 363 LACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGG 422
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + E+ F M ++G++ + IT+ +L AC + +K + + K GI
Sbjct: 423 YADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEV-VKAGIFA 481
Query: 613 QLEHYECMIKLYCRYGYMKE 632
L ++ +Y + G +++
Sbjct: 482 DLAVANALMSMYFKCGSVED 501
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 151/309 (48%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
KT L+ S Y ++ C S A+ + +++ + +V V + + Y
Sbjct: 232 KTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMY 291
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KCG + DAR +F+ +P RD +WN M+G +G +F M V+ +++TY
Sbjct: 292 IKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYL 351
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L + A L K++H VK G +V ++L++ Y K M DAR++FD + +
Sbjct: 352 AILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 411
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ VSW +V Y G E+ F KML++ + T+ L ACS + G +IH
Sbjct: 412 DVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIH 471
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
++K D V +L MY KCG +EDA + + R++++W +++ G A +GR
Sbjct: 472 AEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGL 531
Query: 328 EARELFNEM 336
EA + F M
Sbjct: 532 EALQKFEVM 540
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 145/292 (49%), Gaps = 15/292 (5%)
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
W D + + + +D +L C ++ +GK+VH I R N+++ N
Sbjct: 25 WYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINT 84
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRP 475
LL +Y CG++ AR F + S + VSWN +++GYA RG +EA F+ MQ E P
Sbjct: 85 LLKLYVHCGSVNEARRLFDKFSN-KSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEP 143
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
KFTF ++L+AC++ ++L G+++H V+ N AL+ +Y KC + A RVF
Sbjct: 144 DKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+S D + ++ + + +E+L+ + M +EG++P IT+ +L AC
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSAC------- 256
Query: 596 LALQFFDSMRCKYGIIPQLEHYE------CMIKLYCRYGYMKELEDFVNRMP 641
+L + + + I + EH+ + K+Y + G +K+ + +P
Sbjct: 257 GSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 165/363 (45%), Gaps = 16/363 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + CA + +++ + V V N I Y K G++ DAR +FD MP
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD SW A++G Y G + F M GV AN+ITY VL++ + + L K+
Sbjct: 410 KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKE 469
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +VK G ++ + ++L+ Y KC + DA R+ + + ++ V+WN ++ G
Sbjct: 470 IHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGR 529
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLG 283
G EA+ F M E++RP TF N + AC + EG + + K +
Sbjct: 530 GLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYA 589
Query: 284 SLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRI---REARELFNEMPER 339
+ ++ + G L +A +L P + + W ++++ G + +A E ++ +
Sbjct: 590 CMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQ 649
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
N ++ ++ Y + +W++ LM++ + G S I++ EVH
Sbjct: 650 NAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKE-----------PGRSWIEVAGEVH 698
Query: 400 GFI 402
F+
Sbjct: 699 SFV 701
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/641 (31%), Positives = 339/641 (52%), Gaps = 35/641 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
++ S YA+L C+ +++ +K+ +++ P + L N + YGKC +L DA+ +
Sbjct: 61 LTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKV 120
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD MPER+ SW +++ Y+QNG G LE + M SGV +Q T+ +++++ + ++
Sbjct: 121 FDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDI 180
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
G+ +QLH ++K F ++I +++L+ Y K ++ DA +F + ++ +SW ++ +
Sbjct: 181 GLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGF 240
Query: 220 LVAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G EA+ F +ML + + P F F + ACS L P G Q+HG+ IK G
Sbjct: 241 SQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGL-GR 299
Query: 279 DVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
DV G SL +MY KCG L A R +F ++
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCA-------------------------------RVVFYQIG 328
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++++WNA++AG+ KEA+ F MR D++T+ +L C SE+ G +
Sbjct: 329 RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ 388
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG+I++ ++ V N LL MY KC LR A +F +M D VSWNA+LT R
Sbjct: 389 VHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHD 448
Query: 458 QSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
Q+EE M + RP T +L A A S+E G Q+HC+ ++ +
Sbjct: 449 QAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTN 508
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+++Y KC L+ A ++F + DV+ +S+ILG+ G EAL++F M++ +KP
Sbjct: 509 GLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKP 568
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+H+TF G+L AC H G V+ + + +M ++GI P EH CM+ L R G + E E F
Sbjct: 569 NHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGF 628
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+++M F+P + + + + C+ +G +G+ AA + +++P
Sbjct: 629 IHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDP 669
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 136/249 (54%), Gaps = 4/249 (1%)
Query: 343 SWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
S N + + L+ EA+ F FL +KT + T +++ C+ L ++ GK++H
Sbjct: 29 SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDH 88
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ ++ + N +L+MY KC +L+ A+ F M + R+ VSW +V+ GY++ GQ
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPE-RNVVSWTSVIAGYSQNGQGGN 147
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ + +M Q P +FTF +++ AC+++ + G+Q+H V+++ + +++ + AL+
Sbjct: 148 ALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK-PDHI 579
+YTK + A+ VF ++ D+I SMI GF EAL F M +G+ P+
Sbjct: 208 MYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEF 267
Query: 580 TFHGILLAC 588
F + AC
Sbjct: 268 IFGSVFSAC 276
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLE 494
+S+ R + S N +T ++ EA+ +F +Q +T + T+ L++AC+ + SLE
Sbjct: 21 LSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLE 80
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+IH ++++ ++ + ++ +Y KC L+ A +VF +V+ S+I G+
Sbjct: 81 HGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYS 140
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS-MRCKYG--II 611
N +G ALE + M + G+ PD TF I+ AC G++ L Q ++ ++G II
Sbjct: 141 QNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHII 200
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRM 640
Q +I +Y + + + D +RM
Sbjct: 201 AQ----NALISMYTKSNLIIDALDVFSRM 225
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/642 (31%), Positives = 338/642 (52%), Gaps = 41/642 (6%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
++ S YA+L C+ +++ RK+ +++ P + L N + YGKCG+L DA+ +
Sbjct: 61 LTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKV 120
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD MPER+ SW +++ Y+QNG G LE + M SGV +Q T+ +++++ + ++
Sbjct: 121 FDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDI 180
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
G+ +QLH ++K F ++I +++L+ Y K V+ DA +F + ++ +SW ++ +
Sbjct: 181 GLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGF 240
Query: 220 LVAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G EA+ F +ML + + P F F + ACS L P G Q+HG+ IK G
Sbjct: 241 SQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGL-GR 299
Query: 279 DVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
DV G SL +MY KCG L A R +F ++
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCA-------------------------------RVVFYQIG 328
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++++WNA++AG+ KEA+ F MR D++T+ +L C SE+ G +
Sbjct: 329 RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ 388
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG+I++ ++ V N LL MY KC LR A +F +M D VSWNA+LT
Sbjct: 389 VHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHD 448
Query: 458 QSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
Q+EE M + RP T +L A A S+E G Q+HC+ ++ ++
Sbjct: 449 QAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTN 508
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+++Y KC L+ A ++F + DV+ +S+ILG+ G EAL++F M++ +KP
Sbjct: 509 GLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKP 568
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+H+TF G+L AC H G V+ Q + +M ++GI+P EH CM+ L R G + E E F
Sbjct: 569 NHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAF 628
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
+++M F+P + + + + C+ ++ + ARR N L W
Sbjct: 629 IHQMAFDPDIVVWKTLLAACK-----SVHQALARRTN-LKVW 664
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 137/249 (55%), Gaps = 4/249 (1%)
Query: 343 SWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
S N + + L+ EA+ F FL +KT + T +++ C+ L ++ G+++H
Sbjct: 29 SSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDH 88
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ ++ + N +L+MY KCG+L+ A+ F M + R+ VSW +V+ GY++ GQ
Sbjct: 89 MLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPE-RNVVSWTSVIAGYSQNGQGGN 147
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ + +M Q P +FTF +++ AC+++ + G+Q+H V+++ + +++ + AL+
Sbjct: 148 ALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK-PDHI 579
+YTK + A+ VF ++ D+I SMI GF EAL F M +G+ P+
Sbjct: 208 MYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEF 267
Query: 580 TFHGILLAC 588
F + AC
Sbjct: 268 IFGSVFSAC 276
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLE 494
+S+ R + S N +T ++ EA+ +F +Q +T + T+ L++AC+ + SLE
Sbjct: 21 LSKLRAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLE 80
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G++IH ++++ ++ + ++ +Y KC L+ A +VF +V+ S+I G+
Sbjct: 81 HGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYS 140
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS-MRCKYG--II 611
N +G ALE + M + G+ PD TF I+ AC G++ L Q ++ ++G II
Sbjct: 141 QNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHII 200
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRM 640
Q +I +Y + + + D +RM
Sbjct: 201 AQ----NALISMYTKSNVIIDALDVFSRM 225
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 308/568 (54%), Gaps = 33/568 (5%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W + Y +NGF + L L+ M +G++ +++ + +V+++ + +L +++H I+
Sbjct: 88 WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
RGF +VI+ ++L Y KC + +AR++FD + ++ VSWN I+ Y G EA+
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F +M I+P + T + + C+ L + +G QIH I+ E D +V+ L MY
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA 267
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG + A +LF MP R+V SWNA++ G
Sbjct: 268 KCGN-------------------------------VNTAHKLFERMPIRDVASWNAIIGG 296
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y+ + EAL F M+ + +T+ +L CA L ++ G+++HG+ R+ + SN
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN 356
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
V NAL++MY KCGN+ SA F +M +++ V+WNA+++GY++ G EA+ F EMQ
Sbjct: 357 DVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHGHPHEALALFIEMQ 415
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ +P F ++L ACA+ +LEQGKQIH + IR+ +E NVV LV++Y KC +
Sbjct: 416 AQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVN 475
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A ++F+ DV+ +MIL + + G +AL +F M++ G K DHI F IL AC
Sbjct: 476 TAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACS 535
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V LQ+F M+ YG+ P+LEHY C++ L R G++ E + M P +
Sbjct: 536 HAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVW 595
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELNP 677
+ CR + LGE AA+ L EL+P
Sbjct: 596 GALLGACRIHCNIELGEQAAKHLFELDP 623
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 266/557 (47%), Gaps = 66/557 (11%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
++ + + C S + RK+ +++ V + Y KCG+L++AR +FD M
Sbjct: 122 VFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRM 181
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+RD SWNA++ Y+QNG P L LF +M +G+ N T +V+ A L L K
Sbjct: 182 PKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGK 241
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H ++ G +V++ + LV+ Y KC + A ++F+ + ++ SWN I+ Y +
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNS 301
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+ F +M I+P + T + L AC+ L + +G QIHG I+ FE +DVV
Sbjct: 302 QHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGN 361
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY KCG + A L ++ ++N+++W +I+SGY+ G EA LF EM + +
Sbjct: 362 ALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI-- 419
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
D + +L CA ++ GK++HG+
Sbjct: 420 -----------------------------KPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R+ + SN+ V L+D+Y KCGN+ +A+ F +M + +D VSW ++ Y G E+A+
Sbjct: 451 RSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPE-QDVVSWTTMILAYGIHGHGEDAL 509
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
FS+MQ T+ F +L AC++ ++QG Q Y
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-----------------------Y 546
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+C +Y + + L+ C +LG R E G++K ++PD +
Sbjct: 547 FQCMKSDYGL-----APKLEHYACLVDLLG-----RAGHLDEANGIIKNMSLEPDANVWG 596
Query: 583 GILLACIHEGNVKLALQ 599
+L AC N++L Q
Sbjct: 597 ALLGACRIHCNIELGEQ 613
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 228/440 (51%), Gaps = 35/440 (7%)
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
DI+N NAV W + Y+ G +A+ ++++M R I P F + + AC S
Sbjct: 80 DIRN-NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQA 138
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G ++H II FE D +V +L MY KCG LE+AR + D+ +R+++SW +I++GY+
Sbjct: 139 GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQ 198
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G+ EA LF+EM + N I N+ TL +
Sbjct: 199 NGQPYEALALFSEM-QVNGIKPNSS------------------------------TLVSV 227
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ VCA L ++ GK++H + R+ S++ V N L++MY KCGN+ +A F +M RD
Sbjct: 228 MPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP-IRD 286
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
SWNA++ GY+ Q EA+ F+ MQ +P+ T ++L ACA++ +LEQG+QIH
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+ IR+ +E N V ALV +Y KC + A ++F+ +V+ N++I G+ + E
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHE 406
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F M+ +GIKPD +L AC H ++ Q + G + ++
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQ-IHGYTIRSGFESNVVVGTGLV 465
Query: 622 KLYCRYGYMKELEDFVNRMP 641
+Y + G + + RMP
Sbjct: 466 DIYAKCGNVNTAQKLFERMP 485
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 188/361 (52%), Gaps = 5/361 (1%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
I++ S P + L + +P S +L + + +CA A+ + +++ +
Sbjct: 192 IIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS-VMPVCAHLLALEQGKQIHCYAIRS 250
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
V ++N + Y KCGN++ A LF+ MP RD SWNA++G Y+ N L F
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFF 310
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M G+ N IT +VL + A L +Q+HG ++ GF N ++ ++LV+ Y KC
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC 370
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ A ++F+ + KN V+WN I+ Y G+ EA+ +F +M + I+P +F + L
Sbjct: 371 GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC+ + +G QIHG I+ FE + VV L ++Y KCG + A+ L ++ E++++
Sbjct: 431 PACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVV 490
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLM 367
SWT+++ Y I G +A LF++M E I++ A+L + + L + L + M
Sbjct: 491 SWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCM 550
Query: 368 R 368
+
Sbjct: 551 K 551
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F Q R + V W + GY + G +A+ + +MQ P K F +++ AC + S
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L+ G+++H +I +E +V+ AL +YTKC LE A +VF DV+ N++I G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYG 609
+ N + EAL +F M+ GIKP+ T ++ C H LAL+ + C + G
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAH----LLALEQGKQIHCYAIRSG 251
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
I + ++ +Y + G + RMP
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPI 284
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 231/701 (32%), Positives = 364/701 (51%), Gaps = 24/701 (3%)
Query: 9 LKNILSKSSPKPTPSKTLT------KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEAR 62
LK++L K +K+L KT + H + S + L S EAR
Sbjct: 60 LKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEAR 119
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+L + + +FL N I Y + G+L A+ LFDEM R+ +W ++ YTQNG
Sbjct: 120 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 179
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEE----LELGVSKQLHGLIVKRGFCGNV 178
P F DM +G N + + LR+ E +LGV Q+HGLI K + +V
Sbjct: 180 KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGV--QIHGLISKTRYGSDV 237
Query: 179 ILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
++ + L+ YG C+ DAR +FD I +N++SWN I+ Y G+ A +F M +
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 238 EDIRPLNFTFA--NALFACSFLSSPY-EGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCG 293
E L F+F +A S L +G ++H +I+ + V +G+ L MY K G
Sbjct: 298 EG---LGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSG 354
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+ DA + + E++ +SW S++SG + +A E+F+ MPE + +SWN+++ +
Sbjct: 355 AIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSD 414
Query: 354 S-LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
S +A+ + M + + +VT IL+ + LS ++ ++H + + S +
Sbjct: 415 SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTA 474
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT-SFSEMQW 471
+ NALL Y KCG + F +MS+ RD+VSWN++++GY +AM + MQ
Sbjct: 475 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 534
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
R FTF T+L+ACA++++LE+G ++H IR C E +VV ALV++Y+KC ++YA
Sbjct: 535 GQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYA 594
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
R F+ +V NSMI G+ + G +AL++F M +G PDH+TF G+L AC H
Sbjct: 595 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 654
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G V+ + F SM Y + P++EH+ CM+ L R G + E+ DF+N MP P V + R
Sbjct: 655 GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 714
Query: 652 IFDK-CRKNGYAT-LGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR NG T LG AA L EL P + + N +
Sbjct: 715 VLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMY 755
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 339/645 (52%), Gaps = 35/645 (5%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S P+ Y HL C+S +++ RK+ +++T P + L N + YGKCG+L +
Sbjct: 92 SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKE 151
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR +FD MP ++ SW +M+ Y++ G + L++ M SG + T+ ++++S +
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSG 211
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ +++QLH ++K F ++I +++L+ Y K M DA +F I K+ +SW +
Sbjct: 212 LDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSM 271
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
+ + G EA+ F +ML + + +P F F +A ACS L P G QIHG+ IK
Sbjct: 272 IAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFG 331
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D SL +MY KCG LE AR +F
Sbjct: 332 LGSDLFAGCSLCDMYAKCGFLE-------------------------------SARTVFY 360
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ + ++++WNA++AG+ KE+ F MR T + VT+ +L C+ +
Sbjct: 361 HIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH 420
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G +VH +I + ++ +I V N+LL MY KC NL A F + + D VSWN +LT
Sbjct: 421 GIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACL 480
Query: 455 RRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
++ Q+ E + +++ + +R P T +L + I+S E G QIHCF++++ +++
Sbjct: 481 QQNQAGEVL-RLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDI 539
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
AL+ +YTKC LE A ++F + D+I +S+I+G+ G+EA E+F M+
Sbjct: 540 SVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGL 599
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G+KP+ ITF GIL AC H G V+ L+ + +M+ Y I P EH CM+ L R G +
Sbjct: 600 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDV 659
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
EDF+ +MPF P V + + + C+ +G +G+ AA + +++P
Sbjct: 660 AEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDP 704
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 126/236 (53%), Gaps = 4/236 (1%)
Query: 356 LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L +EAL F + ++ + VT ++N C+ L ++ G+++H + +Y ++ +
Sbjct: 77 LHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR 474
N +L MY KCG+L+ AR F M ++ VSW ++++GY+R G+ + A+T + +M
Sbjct: 137 NHILSMYGKCGSLKEARNMFDSMP-LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGH 195
Query: 475 -PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P FTF +++ +C+ + + +Q+H V+++ + +++ + AL+ +YTK + AI
Sbjct: 196 IPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAIN 255
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLAC 588
VF D+I SMI GF EAL F M + + +P+ F AC
Sbjct: 256 VFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSAC 311
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 339/645 (52%), Gaps = 35/645 (5%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S P+ Y HL C+S +++ RK+ +++T P + L N + YGKCG+L +
Sbjct: 92 SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKE 151
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR +FD MP ++ SW +M+ Y++ G + L++ M SG + T+ ++++S +
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSG 211
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ +++QLH ++K F ++I +++L+ Y K M DA +F I K+ +SW +
Sbjct: 212 LDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSM 271
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
+ + G EA+ F +ML + + +P F F +A ACS L P G QIHG+ IK
Sbjct: 272 IAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFG 331
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D SL +MY KCG LE AR +F
Sbjct: 332 LGSDLFAGCSLCDMYAKCGFLE-------------------------------SARTVFY 360
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ + ++++WNA++AG+ KE+ F MR T + VT+ +L C+ +
Sbjct: 361 HIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH 420
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G +VH +I + ++ +I V N+LL MY KC NL A F + + D VSWN +LT
Sbjct: 421 GIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACL 480
Query: 455 RRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
++ Q+ E + +++ + +R P T +L + I+S E G QIHCF++++ +++
Sbjct: 481 QQNQAGEVL-RLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDI 539
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
AL+ +YTKC LE A ++F + D+I +S+I+G+ G+EA E+F M+
Sbjct: 540 SVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGL 599
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G+KP+ ITF GIL AC H G V+ L+ + +M+ Y I P EH CM+ L R G +
Sbjct: 600 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDV 659
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
EDF+ +MPF P V + + + C+ +G +G+ AA + +++P
Sbjct: 660 AEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDP 704
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 126/236 (53%), Gaps = 4/236 (1%)
Query: 356 LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L +EAL F + ++ + VT ++N C+ L ++ G+++H + +Y ++ +
Sbjct: 77 LHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQ 136
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR 474
N +L MY KCG+L+ AR F M ++ VSW ++++GY+R G+ + A+T + +M
Sbjct: 137 NHILSMYGKCGSLKEARNMFDSMP-LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGH 195
Query: 475 -PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P FTF +++ +C+ + + +Q+H V+++ + +++ + AL+ +YTK + AI
Sbjct: 196 IPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAIN 255
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLAC 588
VF D+I SMI GF EAL F M + + +P+ F AC
Sbjct: 256 VFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSAC 311
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 221/682 (32%), Positives = 360/682 (52%), Gaps = 61/682 (8%)
Query: 15 KSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT 74
K+ K T S TL +S + S E ++Y L H ++AI + L SN
Sbjct: 342 KTGVKSTRS-TLGSVLSA-IASLEALNYGLLVH-------AQAIKQG--LNSN------- 383
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
V++ + I Y KC ++ A+ +FD + ER+ WNAMLG Y QNG+ + ++LF +M
Sbjct: 384 --VYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEM 441
Query: 135 NHSGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
G ++ TY ++L + A E LE+G +QLH I+K F N+ +E++LVD Y KC
Sbjct: 442 RGCGFWPDEFTYTSILSACACLECLEMG--RQLHSFIIKHNFEYNLFVENTLVDMYAKCG 499
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ +AR+ F+ I+N++ VSWN I+ Y+ + EA MF +M+ + I P + A+ L
Sbjct: 500 ALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILS 559
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
C+ L + +G Q+H ++K + SL +MYVKCG +E
Sbjct: 560 GCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIE---------------- 603
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
AR +F+ MP R+V+S NA++AGY ++ L EA+D M+
Sbjct: 604 ---------------AARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGL 647
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND--YSSNIFVSNALLDMYRKCGNLRSA 430
+ ++T +L+ C G ++ +G+++H I + Y + F+ +LL MY A
Sbjct: 648 NPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGD-FLGVSLLVMYMNSQRKTDA 706
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
I F + + + W A+++G+ + G SEEA+ + EM RP + TF ++L AC+
Sbjct: 707 DILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSI 766
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNS 548
++SL G+ IH + + + + A+V++Y KC ++ +++VF+E S DVI NS
Sbjct: 767 LASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNS 826
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI+GF N AL++F MK I+PD +TF G+L AC H G V + FD M Y
Sbjct: 827 MIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSY 886
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
I+P+L+H CMI L R+G++KE E+F++++ F P + + CR +G G A
Sbjct: 887 KIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRA 946
Query: 669 ARRLNELNPWAPFQFKITTNRF 690
A +L EL P + + +N +
Sbjct: 947 AEKLIELEPENSSPYVLLSNIY 968
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 289/553 (52%), Gaps = 38/553 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCGN++ A F+++ +RD +WN++L Y++ G + + F + + GVS NQ
Sbjct: 123 VDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQ 182
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
TYA VL S A +++ + KQ+H ++K GF N E SL+D Y KC + DAR++FD
Sbjct: 183 FTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDA 242
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS-------- 255
+ + + VSW ++ Y+ G +EA+ +F M + + P F + AC
Sbjct: 243 VVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDA 302
Query: 256 ---FLSSPYEGMQIHGVIIK-----------IDF------EGDDVVLGSLTEMYVKCGRL 295
F+ P + V+I IDF G +L + L
Sbjct: 303 CDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL 362
Query: 296 EDAR-GLL------DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
E GLL Q N+ +S+++ YA ++ A+++F+ + ERN++ WNAML
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAML 422
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY ++ + + MR D+ T IL+ CA L ++MG+++H FI ++++
Sbjct: 423 GGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFE 482
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
N+FV N L+DMY KCG L AR F + + RD VSWNA++ GY + +EA F
Sbjct: 483 YNLFVENTLVDMYAKCGALEEARQQF-EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRR 541
Query: 469 MQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M + P + + ++L+ CAN+ +LEQG+Q+HCF++++ + + +L+++Y KC
Sbjct: 542 MILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGA 601
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+E A VF S V+ N++I G+ N+ EA+++F M+ EG+ P ITF +L A
Sbjct: 602 IEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDA 660
Query: 588 CIHEGNVKLALQF 600
C + L Q
Sbjct: 661 CTGPYKLNLGRQI 673
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 272/530 (51%), Gaps = 50/530 (9%)
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
SK +H +K GF L S++VD Y KC + A + F+ ++ ++ ++WN ++ Y
Sbjct: 99 TSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYS 158
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ ++ + F + + P FT+A L +C+ L G Q+H +IK+ FE +
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG---------------- 324
GSL +MY KCG L DAR + D + + +SWT++++GY G
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLG 278
Query: 325 -------------------RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
R+ +A +LF +MP NV++WN M++G+ + EA+DF
Sbjct: 279 LVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFK 338
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M KT + TLG +L+ A L + G VH + +SN++V ++L++MY KC
Sbjct: 339 NMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCE 398
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFE 481
+ +A+ F + +R + V WNA+L GYA+ G + + M FSEM+ W P +FT+
Sbjct: 399 KMEAAKKVFDALDER-NLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFW---PDEFTYT 454
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
++L+ACA + LE G+Q+H F+I++ +E N+ LV++Y KC LE A + F+ +
Sbjct: 455 SILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNR 514
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
D + N++I+G+ E EA +F M +GI PD ++ IL C N++ AL+
Sbjct: 515 DNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGC---ANLQ-ALEQG 570
Query: 602 DSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ + C K G+ L +I +Y + G ++ + MP V M
Sbjct: 571 EQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSM 620
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 122/213 (57%), Gaps = 2/213 (0%)
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ K +H + + S + +A++D+Y KCGN+ A F Q+ ++RD ++WN+VL+
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQL-EKRDILAWNSVLSM 156
Query: 453 YARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y+R+G E+ + F +Q P++FT+ +L++CA + ++ GKQ+HC VI+ +E N
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
C G+L+++Y+KC L A ++F D + +MI G+ EAL+VF M+K
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
G+ PD + F ++ AC+ G + A F M
Sbjct: 277 LGLVPDQVAFVTVITACVGLGRLDDACDLFVQM 309
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W A++ +TQNG L+L+ +M+ + +Q T+A+VLR+ + LG + +H LI
Sbjct: 722 WTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIF 781
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN-AVSWNVIVRRYLVAGNGKEAV 229
G + + S++VD Y KC M + ++F+++ +KN +SWN ++ + G + A+
Sbjct: 782 HVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENAL 841
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII---KIDFEGDDVVLGSLT 286
+F +M IRP + TF L ACS EG +I +++ KI D +
Sbjct: 842 KIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHC--ACMI 899
Query: 287 EMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISG---RIREARELFNEMPERNVI 342
++ + G L++A +D+ + E N + W +++ I G R R A E E+ N
Sbjct: 900 DLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSS 959
Query: 343 SWNAMLAGYTRSLLWKE 359
+ + Y S W E
Sbjct: 960 PYVLLSNIYAASGNWDE 976
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/651 (30%), Positives = 335/651 (51%), Gaps = 44/651 (6%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H K + SY Y L Q C +K + +++ +++ P V++ N ++ Y CG+
Sbjct: 20 HRKGPQVDSYD-YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+++AR LFD+ + SWN M+ Y G LF M + ++ T+ ++L +
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L +++H +++ G + + ++L+ Y KC + DARR+FD + +++ VSW
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
+ Y +G G+E++ + ML+E +RP T+ N L AC L++ +G QIH I++
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVE 258
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
++ D V +LT+MY+KCG +DA RE+
Sbjct: 259 SEYHSDVRVSTALTKMYMKCGAFKDA-------------------------------REV 287
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F + R+VI+WN M+ G+ S +EA M + D+ T +L+ CA +
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGL 347
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
GKE+H ++ S++ NAL++MY K G+++ AR F +M +RD VSW +L
Sbjct: 348 ARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTTLLGR 406
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
YA Q E+ T+F +M Q + +K T+ +L AC+N +L+ GK+IH V++ +
Sbjct: 407 YADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD 466
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+ AL+ +Y KC +E AIRVF+ S DV+ N++I G N RG EAL+ + +MK
Sbjct: 467 LAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKS 526
Query: 572 EGIKPDHITFHGILLAC-----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
EG++P+ TF +L AC + EG + A D YGI+P +HY CM+ + R
Sbjct: 527 EGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKD-----YGIVPTEKHYACMVDILAR 581
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G+++E ED + +P P+ M + CR + +GE AA +L P
Sbjct: 582 AGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEP 632
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 250/500 (50%), Gaps = 34/500 (6%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
++ G + Y +L+S + +L V KQ+H I++ G NV + ++L+ Y C
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ +AR++FD NK+ VSWNV++ Y G +EA +F M +E + P FTF + L A
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS + G +IH +++ D V +L MY KCG + DAR + D R+ +SW
Sbjct: 139 CSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T++ YA SG E ++ +++AML R
Sbjct: 199 TTLTGAYAESG-----------YGEESLKTYHAMLQERVRP------------------- 228
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++T +L+ C L+ ++ GK++H I ++Y S++ VS AL MY KCG + AR
Sbjct: 229 -SRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F +S RD ++WN ++ G+ GQ EEA +F M E P + T+ T+L+ACA
Sbjct: 288 FECLSY-RDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGG 346
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L +GK+IH ++ +V AL+ +Y+K ++ A +VF DV+ +++
Sbjct: 347 LARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGR 406
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ ++ E+ F M ++G+K + IT+ +L AC + +K + + K G++
Sbjct: 407 YADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV-VKAGLLA 465
Query: 613 QLEHYECMIKLYCRYGYMKE 632
L ++ +Y + G +++
Sbjct: 466 DLAVTNALMSMYFKCGSVED 485
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 148/309 (47%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
KT L+ S Y ++ C S A+ + +++ +++V V + + Y
Sbjct: 216 KTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMY 275
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KCG DAR +F+ + RD +WN M+ + +G F M GV+ ++ TY
Sbjct: 276 MKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYT 335
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
VL + A L K++H K G +V ++L++ Y K M DAR++FD + +
Sbjct: 336 TVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR 395
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ VSW ++ RY E+ F +ML++ ++ T+ L ACS + G +IH
Sbjct: 396 DVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIH 455
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
++K D V +L MY KCG +EDA + + R++++W +++ G +GR
Sbjct: 456 AEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGL 515
Query: 328 EARELFNEM 336
EA + + M
Sbjct: 516 EALQRYEVM 524
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
W D + + + +D +L C ++ +GK+VH I R N++++N
Sbjct: 9 WYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNT 68
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RP 475
LL +Y CG++ AR F + S + VSWN +++GYA RG ++EA F+ MQ E P
Sbjct: 69 LLKLYAHCGSVNEARQLFDKFSN-KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEP 127
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
KFTF ++L+AC++ + L G++IH V+ + AL+ +Y KC + A RVF
Sbjct: 128 DKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVF 187
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+S D + ++ + + G E+L+ + M +E ++P IT+ +L AC
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSAC 240
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 166/368 (45%), Gaps = 16/368 (4%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y + CA + +++ + V N I Y K G++ DAR +FD
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDR 391
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+RD SW +LG Y + F M GV AN+ITY VL++ + + L
Sbjct: 392 MPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWG 451
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++H +VK G ++ + ++L+ Y KC + DA R+F+ + ++ V+WN ++
Sbjct: 452 KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQN 511
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVV 281
G G EA+ + M E +RP TF N L AC + EG + + K +
Sbjct: 512 GRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKH 571
Query: 282 LGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRI---REARELFNEMP 337
+ ++ + G L +A +L P + + W ++++ I + A E ++
Sbjct: 572 YACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLE 631
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+N + ++ A Y + +W++ V +RK K+ + G S I++ E
Sbjct: 632 PQNAGLYVSLSAIYAAAGMWRD----VAKLRKFMKERG-------VKKEPGRSWIEIAGE 680
Query: 398 VHGFIHRN 405
VH F+ R+
Sbjct: 681 VHSFVARD 688
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 335/634 (52%), Gaps = 33/634 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + + C+ K + +++ +V VF+ N + Y KC D++ LFDE+P
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ SWNA+ Y Q F G + LF +M SG+ N+ + ++++ + + K
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++K G+ + ++LVD Y K + DA +F+ I+ + VSWN ++ ++ +
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++A+ + +M R I P FT ++AL AC+ + G Q+H ++K+D E D V
Sbjct: 340 HEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG 399
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC LEDAR + E+++I+W +I+SGY+ EA LF EM
Sbjct: 400 LVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH------- 452
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
KE + F +Q TL IL AGL + + ++VHG +
Sbjct: 453 -------------KEGIGF-----------NQTTLSTILKSTAGLQVVHVCRQVHGLSVK 488
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + S+I+V N+L+D Y KC ++ A F + + D VS+ +++T YA+ GQ EEA+
Sbjct: 489 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT-IGDLVSFTSMITAYAQYGQGEEALK 547
Query: 465 SFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F EMQ E +P +F +LL ACAN+S+ EQGKQ+H +++ + +++ +LV +Y
Sbjct: 548 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYA 607
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC ++ A R F E + ++ ++MI G + GR+AL++F M KEG+ P+HIT
Sbjct: 608 KCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVS 667
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V A +F+SM +G P EHY CMI L R G + E + VN+MPF
Sbjct: 668 VLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFE 727
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + R + LG AA L L P
Sbjct: 728 ANASVWGALLGAARIHKDVELGRRAAEMLFILEP 761
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 309/595 (51%), Gaps = 35/595 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S S Y+ L C ++K++ ++ +++ + + N I Y KC N AR
Sbjct: 54 PTSVS-YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
L DE E D SW+A++ Y QNG G L F +M+ GV N+ T+++VL++ + +
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + KQ+HG++V GF G+V + ++LV Y KC D++R+FD+I +N VSWN +
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ EAV +F++M+ I+P F+ ++ + AC+ L G IHG +IK+ ++ D
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+L +MY K G L DA + ++ + +I+SW ++++G + +A EL +M +
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM-K 351
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+ I N TL L CAG+ ++G+++
Sbjct: 352 RSGICPNIF------------------------------TLSSALKACAGMGLKELGRQL 381
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + + D S++FVS L+DMY KC L AR+ F + + +D ++WNA+++GY++ +
Sbjct: 382 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE-KDLIAWNAIISGYSQYWE 440
Query: 459 SEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA++ F EM E ++ T T+L + A + + +Q+H +++ + ++ +
Sbjct: 441 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 500
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L++ Y KC +E A R+F+E + D++ SMI + +G EAL++F M+ +KPD
Sbjct: 501 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 560
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+L AC + + Q + KYG + + ++ +Y + G + +
Sbjct: 561 RFVCSSLLNACANLSAFEQGKQLHVHI-LKYGFVLDIFAGNSLVNMYAKCGSIDD 614
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 206/695 (29%), Positives = 358/695 (51%), Gaps = 58/695 (8%)
Query: 20 PTPSKTLTK---TISGHLKS---DEPVSY-------------SLYAHLFQLCASSKAIVE 60
P P + + ISGH K+ +E +++ S A + AS A+
Sbjct: 176 PIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNH 235
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
+ ++ + +++ + I YGKC DDAR +FD + +++ WNAMLG Y+Q
Sbjct: 236 GLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQ 295
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNV 178
NGF +ELFLDM G+ ++ TY ++L + A E LE+G +QLH I+K+ F N+
Sbjct: 296 NGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVG--RQLHSAIIKKRFTSNL 353
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++L+D Y K + +A + F+ + ++ +SWN I+ Y+ A +F +M+ +
Sbjct: 354 FVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILD 413
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
I P + A+ L AC + G Q H + +K+ E + SL +MY KCG ++DA
Sbjct: 414 GIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDA 473
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
ER+++S ++++GYA+ K
Sbjct: 474 HKTYSSMPERSVVSVNALIAGYALKNT--------------------------------K 501
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH-GFIHRNDYSSNIFVSNAL 417
E+++ + M+ ++T +++VC G +++ +G ++H + R + F+ +L
Sbjct: 502 ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSL 561
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
L MY L A I F + S + V W A+++G+ + S+ A+ + EM+ P
Sbjct: 562 LGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPD 621
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+ TF T+L ACA +SSL G++IH + ++++ + ALV++Y KC ++ +++VF+
Sbjct: 622 QATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFE 681
Query: 537 E-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E ++ DVI NSMI+GF N + AL+VF M + I PD +TF G+L AC H G V
Sbjct: 682 ELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVY 741
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
Q FD M YGI P+++HY CM+ L R+G++KE E+F++++ P + +
Sbjct: 742 EGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGA 801
Query: 656 CRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR +G G+ AA++L EL P + + + +N +
Sbjct: 802 CRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMY 836
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 272/603 (45%), Gaps = 57/603 (9%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPE--RDGGSWNAMLGAYTQNGFPGRTLELF 131
P L + Y G LDDA LF +MP R+ +WN M+ + + L F
Sbjct: 146 VPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFF 205
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M+ GV +++ T A+VL + A L +H +K+GF ++ + SSL++ YGKC
Sbjct: 206 HQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKC 265
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ DAR++FD I KN + WN ++ Y G + +F M+ I P FT+ + L
Sbjct: 266 QMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSIL 325
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
C+ G Q+H IIK F + V +L +MY K G L++A + R+ I
Sbjct: 326 STCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHI 385
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW +I+ GY A LF M ++
Sbjct: 386 SWNAIIVGYVQEEVEAGAFSLFRRMILDGIVP---------------------------- 417
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
D+V+L IL+ C + ++ G++ H + +N+F ++L+DMY KCG+++ A
Sbjct: 418 ---DEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAH 474
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANI 490
+ M + R VS NA++ GYA + ++E++ EMQ +PS+ TF +L+ C
Sbjct: 475 KTYSSMPE-RSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGS 532
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRG-----ALVEVYTKCCCLEYAIRVFKESSSL-DVI 544
+ + G QIHC +++ ++C +L+ +Y L A +F E SSL ++
Sbjct: 533 AKVILGLQIHCAIVKR----GLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIV 588
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----IHEGNVKLALQ 599
+ ++I G NE AL ++ M+ I PD TF +L AC +H+G +L
Sbjct: 589 MWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLI 648
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
F + +L ++ +Y + G +K + V + KN
Sbjct: 649 FHTGFD-----LDELTS-SALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKN 702
Query: 660 GYA 662
GYA
Sbjct: 703 GYA 705
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/575 (26%), Positives = 256/575 (44%), Gaps = 79/575 (13%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
SGH P ++ +A CA + + R + S ++ F I Y KC
Sbjct: 41 SGH----SPDQFT-FAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKC 95
Query: 91 GNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+L AR +F P SW A++ Y Q G P L +F M +S V +Q+
Sbjct: 96 NSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVT 154
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQN 206
VL +AY + DA ++F I
Sbjct: 155 VL-----------------------------------NAYISLGKLDDACQLFQQMPIPI 179
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+N V+WNV++ + + +EA+ F +M + ++ T A+ L A + L++ G+ +
Sbjct: 180 RNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLV 239
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H IK FE V SL MY KC +DAR + D ++N+I W +++ Y+ +G +
Sbjct: 240 HAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFL 299
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
ELF +M + D+ T IL+ C
Sbjct: 300 SNVMELFLDMISCGI-------------------------------HPDEFTYTSILSTC 328
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A +++G+++H I + ++SN+FV+NAL+DMY K G L+ A F M+ RD +SW
Sbjct: 329 ACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMT-YRDHISW 387
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
NA++ GY + A + F M + P + + ++L+AC NI LE G+Q HC ++
Sbjct: 388 NAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVK 447
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
E N+ +L+++Y+KC ++ A + + V+ N++I G+ + +E++ +
Sbjct: 448 LGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYAL-KNTKESINL 506
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
M+ G+KP ITF ++ C V L LQ
Sbjct: 507 LHEMQILGLKPSEITFASLIDVCKGSAKVILGLQI 541
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 224/475 (47%), Gaps = 46/475 (9%)
Query: 227 EAVVMFF-KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
E V+ F+ + P FTFA L AC+ L + + G +H +IK E G+L
Sbjct: 29 ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88
Query: 286 TEMYVKCGRLEDARGLLDQP--DERNIISWTSIVSGYAISGRIREARELFNEM------- 336
+Y KC L AR + + +SWT+++SGY +G EA +F++M
Sbjct: 89 IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPD 148
Query: 337 -----------------------------PERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
P RNV++WN M++G+ ++ ++EAL F M
Sbjct: 149 QVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQM 208
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
K + TL +L+ A L+ + G VH + + S+I+V+++L++MY KC
Sbjct: 209 SKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMP 268
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAA 486
AR F +SQ ++ + WNA+L Y++ G M F +M P +FT+ ++L+
Sbjct: 269 DDARQVFDAISQ-KNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILST 327
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA LE G+Q+H +I+ + N+ AL+++Y K L+ A + F+ + D I
Sbjct: 328 CACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISW 387
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL--ALQFFDSM 604
N++I+G+ E A +F M +GI PD ++ IL AC GN+K+ A Q F +
Sbjct: 388 NAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSAC---GNIKVLEAGQQFHCL 444
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
K G+ L +I +Y + G +K+ + MP V + I KN
Sbjct: 445 SVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN 499
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 446 WNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN + G + SE + ++ M P +FTF L+ACA + +L G+ +H VI
Sbjct: 16 WNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES--SSLDVIICNSMILGFCHNERGREA 562
++ E C+GAL+ +Y KC L A +F + L + ++I G+ EA
Sbjct: 75 KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L +F M+ + PD + +L A I G + A Q F M I + + MI
Sbjct: 135 LHIFDKMRNSAV-PDQVALVTVLNAYISLGKLDDACQLFQQMPIP---IRNVVAWNVMIS 190
Query: 623 LYCRYGYMKELEDFVNRM 640
+ + + +E F ++M
Sbjct: 191 GHAKTAHYEEALAFFHQM 208
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 35/248 (14%)
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V WN + G T+ + L F + DQ T + L+ CA L + +G+ VH
Sbjct: 13 VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRGQS 459
+ ++ S F AL+ +Y KC +L AR F VSW A+++GY + G
Sbjct: 72 CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ F +M+ P + T+L A ++ L+ Q+ ++ + R
Sbjct: 132 HEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLF-------QQMPIPIR---- 180
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+V+ N MI G EAL F M K G+K
Sbjct: 181 ----------------------NVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRS 218
Query: 580 TFHGILLA 587
T +L A
Sbjct: 219 TLASVLSA 226
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 332/653 (50%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y +++ + C + +L +V + + F+ N + Y + GNL A
Sbjct: 211 PTPY-VFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F +M RD S+N+++ Q GF R L+LF M + + +T A++L + A
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
KQLH ++K G ++I+E SL+D Y KC + A F + +N V WNV++
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVA 389
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y GN E+ +F +M E + P +T+ + L C+ L + G QIH +IK F+ +
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V L +MY K G L+ A R + + E
Sbjct: 450 VYVCSVLIDMYAKHGELDTA-------------------------------RGILQRLRE 478
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+V+SW AM+AGYT+ L+ EAL M D + ++ CAG+ + G+++
Sbjct: 479 EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI 538
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + + YS ++ + NAL+ +Y +CG + A + F ++ + D +SWNA+++G+A+ G
Sbjct: 539 HAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAK-DNISWNALISGFAQSGH 597
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ FS+M Q + FTF + ++A AN ++++QGKQIH +I+ Y+
Sbjct: 598 CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNV 657
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y+KC +E A R F E +V+ N+MI G+ + G EA+ +F MK+ G+ P+
Sbjct: 658 LITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPN 717
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+TF G+L AC H G V L +F SM ++G++P+ EHY C++ L R + +F+
Sbjct: 718 HVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFI 777
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE+AAR L EL P + + +N +
Sbjct: 778 EEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMY 830
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/602 (26%), Positives = 290/602 (48%), Gaps = 37/602 (6%)
Query: 43 SLYAHLFQLCASSKAIVE-ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
S +A + + C+ KA + ++ + ++ + N I+ Y K G++D A+ +F+
Sbjct: 112 STFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL-G 160
+ +D SW AM+ +QNG + LF M+ S V +++VL S+ ++EL
Sbjct: 172 RLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVL-SACTKIELFK 230
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +QLHG IVK G + ++LV Y + + A ++F + ++ +S+N ++
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G A+ +F KM + ++P T A+ L AC+ + + Y+G Q+H +IK+ D +
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI 350
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ GSL ++YVKC +E A + N++ W ++ Y G + E+ +F +M
Sbjct: 351 IEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG 410
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
++ +Q T IL C L + +G+++H
Sbjct: 411 LMP-------------------------------NQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ ++ + N++V + L+DMY K G L +AR Q + D VSW A++ GY +
Sbjct: 440 QVIKSGFQFNVYVCSVLIDMYAKHGELDTAR-GILQRLREEDVVSWTAMIAGYTQHDLFA 498
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ F EM+ + R F + ++ACA I +L QG+QIH + Y ++ ALV
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALV 558
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y +C + A F++ + D I N++I GF + EAL+VF M + G++ +
Sbjct: 559 SLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLF 618
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF + A + N+K Q +M K G + E +I LY + G +++ +
Sbjct: 619 TFGSAVSATANTANIKQGKQ-IHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFE 677
Query: 640 MP 641
MP
Sbjct: 678 MP 679
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 278/546 (50%), Gaps = 34/546 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y LF+ C +S ++++A+KL + + L +R I+ Y G +D+A LFD++P
Sbjct: 13 YLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIP 72
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSK 163
+ WN ++ + L LF M V+ ++ T+A+VLR+ S + V++
Sbjct: 73 SSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTE 132
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H I+ GF + ++ + L+D Y K + A+ +F+ + K++VSW ++ G
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNG 192
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+++F +M + + P + F++ L AC+ + G Q+HG I+K + V
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +Y + G L A + + R+ IS+ S++SG A G A +LF +M
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ------ 306
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
LD M+ D VT+ +L+ CA + GK++H ++
Sbjct: 307 -----------------LD---CMKP-----DCVTVASLLSACASVGAGYKGKQLHSYVI 341
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ SS++ + +LLD+Y KC ++ +A +F ++ + V WN +L Y + G E+
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFL-TTETENVVLWNVMLVAYGQLGNLSESY 400
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ E P+++T+ ++L C ++ +L+ G+QIH VI++ ++ NV L+++Y
Sbjct: 401 WIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMY 460
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
K L+ A + + DV+ +MI G+ ++ EAL++F M+ +GI+ D+I F
Sbjct: 461 AKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFS 520
Query: 583 GILLAC 588
+ AC
Sbjct: 521 SAISAC 526
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 252/511 (49%), Gaps = 39/511 (7%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G+ AN TY + L +K+LH I K GF G +L S L+D Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ +A ++FDDI + N WN ++ L + + +F M+ E++ P TFA+ L A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 254 CSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
CS +P++ QIH II F +V L ++Y K
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSK--------------------- 159
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+G + A+ +F + ++ +SW AM++G +++ EA+ M K+
Sbjct: 160 ----------NGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAV 209
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+L+ C + K+G+++HGFI + SS FV NAL+ +Y + GNL +A
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F +M RRD++S+N++++G A+RG S+ A+ F +MQ + +P T +LL+ACA++
Sbjct: 270 IFSKM-HRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVG 328
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ +GKQ+H +VI+ +++ G+L+++Y KC +E A F + + +V++ N M++
Sbjct: 329 AGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLV 388
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ E+ +F M+ EG+ P+ T+ IL C G + L Q + K G
Sbjct: 389 AYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQV-IKSGF- 446
Query: 612 PQLEHYEC--MIKLYCRYGYMKELEDFVNRM 640
Q Y C +I +Y ++G + + R+
Sbjct: 447 -QFNVYVCSVLIDMYAKHGELDTARGILQRL 476
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 340/649 (52%), Gaps = 38/649 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + CA S ++ + R++ + VF+ N + YG CG L D + +FDEM
Sbjct: 10 FPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEML 69
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEELELGVS- 162
ERD SWN+++G ++ +GF + LF +MN SG N ++ +VL A LE GV+
Sbjct: 70 ERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG-LEDGVTG 128
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+H +VK G V + ++LVD YGKC + D+RR+FD+I +N VSWN I+
Sbjct: 129 RQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYL 188
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
++A+ MF M+ ++P + TF++ L L G +IHG ++ E D V
Sbjct: 189 ERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVA 248
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY K SGR +A +FN++ E+N++
Sbjct: 249 NALIDMYAK-------------------------------SGRSLQASNVFNQIGEKNIV 277
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWNAM+A + ++ L A+D V M+ + + VT +L CA + ++ GKE+H
Sbjct: 278 SWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARA 337
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R S ++FVSNAL DMY KCG L AR F RD+VS+N ++ GY++ E+
Sbjct: 338 IRTGSSVDLFVSNALTDMYAKCGCLNLARRVF--KISLRDEVSYNILIIGYSQTTNCSES 395
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F EM + + ++ +++ACAN+++L+QGK++H +R ++ AL++
Sbjct: 396 LRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDF 455
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++ A +VF++ S D NSMILG+ A+ +F MK++G++ D +++
Sbjct: 456 YIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSY 515
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V+ ++F+ M+ + I P HY CM+ L R G ++E + +P
Sbjct: 516 IAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLP 574
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + CR +GY L WAA L +L P + + +N +
Sbjct: 575 IEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMY 623
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 235/460 (51%), Gaps = 35/460 (7%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV + T+ VL++ A+ L + +++HG++ K GF +V + ++L+ YG C + D
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSF 256
+R+FD++ ++ VSWN ++ + V G EA+ +F +M LR RP + + L C+
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G QIH ++K + V +L ++Y KCG ++D+R + D+ ERN +SW +I
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ A R ++A E+F M + V +
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGV-------------------------------KPNS 210
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT +L V L GKE+HGF R S+IFV+NAL+DMY K G A F Q
Sbjct: 211 VTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQ 270
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQ 495
+ + ++ VSWNA++ +A+ A+ +MQ + P+ TF +L ACA I L
Sbjct: 271 IGE-KNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRP 329
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IH IR +++ AL ++Y KC CL A RVFK S D + N +I+G+
Sbjct: 330 GKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLR-DEVSYNILIIGYSQ 388
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E+L +F M +G+K D +++ G++ AC + +K
Sbjct: 389 TTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALK 428
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 143/275 (52%), Gaps = 16/275 (5%)
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D T +L CA ++ G+E+HG + + + S++FV N LL Y CG L+ +
Sbjct: 5 LDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRV 64
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANIS 491
F +M + RD VSWN+V+ ++ G EA+ F EM + RP+ + ++L CA +
Sbjct: 65 FDEMLE-RDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
G+QIHC+V++ + V ALV+VY KC ++ + RVF E S + + N++I
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIIT 183
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD------SMR 605
+ ER ++ALE+F LM G+KP+ +TF +L V + L+ FD
Sbjct: 184 SLAYLERNQDALEMFRLMIDGGVKPNSVTFSSML-------PVLVELKLFDFGKEIHGFS 236
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
++G+ + +I +Y + G + + N++
Sbjct: 237 LRFGLESDIFVANALIDMYAKSGRSLQASNVFNQI 271
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 174/377 (46%), Gaps = 21/377 (5%)
Query: 33 HLKSDEPVSYSL-YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
+++D + S+ + ++ CA + +++ + + + +F+ N + Y KCG
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
L+ AR +F ++ RD S+N ++ Y+Q +L LFL+M G+ + ++Y V+
Sbjct: 361 CLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVIS 419
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ A L K++HGL V++ ++ + ++L+D Y KC + A ++F I +++ S
Sbjct: 420 ACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTAS 479
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y + G A+ +F M + + + ++ L ACS EG + +
Sbjct: 480 WNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQ 539
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR--- 327
+ + + + ++ + G +E+A L++ P E + W +++ I G I
Sbjct: 540 VQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAH 599
Query: 328 -EARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
A LF P+ + + ++L+ Y + W EA LM+ +
Sbjct: 600 WAAEHLFKLKPQHS--GYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKN---------- 647
Query: 386 CAGLSEIKMGKEVHGFI 402
G S +++ +VH F+
Sbjct: 648 -PGCSWVQIDNQVHAFV 663
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 200/648 (30%), Positives = 337/648 (52%), Gaps = 36/648 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + CA ++ + + R+L + ++ +F+ I + KCG++ DA +FD +P
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP 273
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD +W +M+ ++G + LF M GV +++ + ++LR+ L K+
Sbjct: 274 TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKK 333
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H + + G+ + + ++++ Y KC M DA +FD ++ +N VSW ++ + G
Sbjct: 334 VHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGR 393
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA + F KM+ I P TF + L ACS S+ G QI II+ + DD V +
Sbjct: 394 IDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTA 453
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KC G +++A +F ++ ++NV++W
Sbjct: 454 LLSMYAKC-------------------------------GSLKDAHRVFEKISKQNVVAW 482
Query: 345 NAMLAGYTRSLLWKEAL-DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
NAM+ Y + + AL F L+++ K + T ILNVC +++GK VH I
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCKSSDSLELGKWVHFLIM 541
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S++ VSNAL+ M+ CG+L SA+ F M +RD VSWN ++ G+ + G+++ A
Sbjct: 542 KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAF 600
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F MQ +P K TF LL ACA+ +L +G+++H + ++ +V+ L+ +Y
Sbjct: 601 DYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMY 660
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
TKC +E A +VF + +V SMI G+ + RG+EALE+F M++EG+KPD ITF
Sbjct: 661 TKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFV 720
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G L AC H G ++ L F SM+ ++ I P++EHY CM+ L+ R G + E +F+ +M
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV 779
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + C+ + L E AA++ EL+P F I +N +
Sbjct: 780 EPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIY 827
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 179/642 (27%), Positives = 326/642 (50%), Gaps = 48/642 (7%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLE 65
A + N LSK+ + L + S H++ + Y+ L QLC K + + ++
Sbjct: 78 ANAVLNRLSKAGQFNEAMQVLERVDSSHIQ----IYRQTYSALLQLCIKFKNLGDGERIY 133
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
+++ P +F+ N I Y KCGN A+ +FD+M E+D SWN +LG Y Q+G
Sbjct: 134 NHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+L M V ++ T+ ++L + A+ + ++L+ LI+K G+ ++ + ++L+
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
+ + KC + DA ++FD++ ++ V+W ++ G K+A +F +M E ++P
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
F + L AC+ + +G ++H + ++ ++ + V ++ MY KCG +EDA + D
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN++SWT++++G+A GRI EA FN+M E +
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI------------------------ 409
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ ++VT IL C+ S +K G+++ I Y S+ V ALL MY KCG
Sbjct: 410 -------EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+L+ A F ++S +++ V+WNA++T Y + Q + A+ +F + E +P+ TF ++L
Sbjct: 463 SLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
C + SLE GK +H +++ E ++ ALV ++ C L A +F + D++
Sbjct: 522 NVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLV 581
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----IHEGNVKLALQ 599
N++I GF + + + A + F +M++ GIKPD ITF G+L AC + EG AL
Sbjct: 582 SWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALI 641
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ C + L I +Y + G +++ +++P
Sbjct: 642 TEAAFDCDVLVGTGL------ISMYTKCGSIEDAHQVFHKLP 677
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 280/537 (52%), Gaps = 34/537 (6%)
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+D NA+L ++ G +++ ++ S + + TY+ +L+ + LG +++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
+ I K G ++ + ++L++ Y KC A+++FDD++ K+ SWN+++ Y+ G
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA + +M+++ ++P TF + L AC+ + +G +++ +I+K ++ D V +L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
M++KCG + DA + D R++++WTS+++G A GR ++A LF M E V
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV---- 308
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
D+V +L C ++ GK+VH +
Sbjct: 309 ---------------------------QPDKVAFVSLLRACNHPEALEQGKKVHARMKEV 341
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ + I+V A+L MY KCG++ A + + + + R+ VSW A++ G+A+ G+ +EA
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDA-LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F++M + P++ TF ++L AC++ S+L++G+QI +I Y + R AL+ +Y K
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L+ A RVF++ S +V+ N+MI + +E+ AL F + KEGIKP+ TF I
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L C +++L ++ + K G+ L ++ ++ G + ++ N MP
Sbjct: 521 LNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/646 (30%), Positives = 336/646 (52%), Gaps = 36/646 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + CA ++ + + R+L + ++ +F+ I + KCG++ DA +FD +P
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP 273
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD +W +M+ ++G + LF M GV +++ + ++LR+ L K+
Sbjct: 274 TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKK 333
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H + + G+ + + ++++ Y KC M DA +FD ++ +N VSW ++ + G
Sbjct: 334 VHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGR 393
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA + F KM+ I P TF + L ACS S+ G QI II+ + DD V +
Sbjct: 394 IDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTA 453
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KC G +++A +F ++ ++NV++W
Sbjct: 454 LLSMYAKC-------------------------------GSLKDAHRVFEKISKQNVVAW 482
Query: 345 NAMLAGYTRSLLWKEAL-DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
NAM+ Y + + AL F L+++ K + T ILNVC +++GK VH I
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCKSSDSLELGKWVHFLIM 541
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S++ VSNAL+ M+ CG+L SA+ F M +RD VSWN ++ G+ + G+++ A
Sbjct: 542 KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAF 600
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F MQ +P K TF LL ACA+ +L +G+++H + ++ +V+ L+ +Y
Sbjct: 601 DYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMY 660
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
TKC +E A +VF + +V SMI G+ + RG+EALE+F M++EG+KPD ITF
Sbjct: 661 TKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFV 720
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G L AC H G ++ L F SM+ ++ I P++EHY CM+ L+ R G + E +F+ +M
Sbjct: 721 GALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV 779
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
P + + C+ + L E AA++ EL+P F I +N
Sbjct: 780 EPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/642 (27%), Positives = 326/642 (50%), Gaps = 48/642 (7%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLE 65
A + N LSK+ + L + S H++ + Y+ L QLC K + + ++
Sbjct: 78 ANAVLNRLSKAGQFNEAMQVLERVDSSHIQ----IYRQTYSALLQLCIKFKNLGDGERIY 133
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
+++ P +F+ N I Y KCGN A+ +FD+M E+D SWN +LG Y Q+G
Sbjct: 134 NHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+L M V ++ T+ ++L + A+ + ++L+ LI+K G+ ++ + ++L+
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
+ + KC + DA ++FD++ ++ V+W ++ G K+A +F +M E ++P
Sbjct: 254 NMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
F + L AC+ + +G ++H + ++ ++ + V ++ MY KCG +EDA + D
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN++SWT++++G+A GRI EA FN+M E +
Sbjct: 374 KGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI------------------------ 409
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ ++VT IL C+ S +K G+++ I Y S+ V ALL MY KCG
Sbjct: 410 -------EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCG 462
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+L+ A F ++S +++ V+WNA++T Y + Q + A+ +F + E +P+ TF ++L
Sbjct: 463 SLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
C + SLE GK +H +++ E ++ ALV ++ C L A +F + D++
Sbjct: 522 NVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLV 581
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----IHEGNVKLALQ 599
N++I GF + + + A + F +M++ GIKPD ITF G+L AC + EG AL
Sbjct: 582 SWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALI 641
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ C + L I +Y + G +++ +++P
Sbjct: 642 TEAAFDCDVLVGTGL------ISMYTKCGSIEDAHQVFHKLP 677
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 280/537 (52%), Gaps = 34/537 (6%)
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+D NA+L ++ G +++ ++ S + + TY+ +L+ + LG +++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
+ I K G ++ + ++L++ Y KC A+++FDD++ K+ SWN+++ Y+ G
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA + +M+++ ++P TF + L AC+ + +G +++ +I+K ++ D V +L
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
M++KCG + DA + D R++++WTS+++G A GR ++A LF M E V
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV---- 308
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
D+V +L C ++ GK+VH +
Sbjct: 309 ---------------------------QPDKVAFVSLLRACNHPEALEQGKKVHARMKEV 341
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ + I+V A+L MY KCG++ A + + + + R+ VSW A++ G+A+ G+ +EA
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDA-LEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F++M + P++ TF ++L AC++ S+L++G+QI +I Y + R AL+ +Y K
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L+ A RVF++ S +V+ N+MI + +E+ AL F + KEGIKP+ TF I
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L C +++L ++ + K G+ L ++ ++ G + ++ N MP
Sbjct: 521 LNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP 576
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/651 (30%), Positives = 339/651 (52%), Gaps = 34/651 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ + ++ + C ++ R + + VF+ + I+ Y + G + DAR
Sbjct: 145 PDKYT-FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARY 203
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD MP +DG WN ML Y +NG +F++M + + N +T+A VL A E+
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ QLHGL+V G + + ++L+ Y KC + DARR+FD + + V+WN ++
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISG 323
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G EA +F +M+ ++P + TF++ L S ++ +G +IH II+ D
Sbjct: 324 YVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLD 383
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L ++Y KC +E AR + DQ +I+ T
Sbjct: 384 VFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCT------------------------ 419
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
AM++GY + + AL+ + + + VTL +L CAGL+ + +GKE+
Sbjct: 420 -------AMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 472
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG I +N + + +V +A++DMY KCG L A F +S + D V WN+++T ++ G+
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK-DAVCWNSMITSCSQNGK 531
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ F +M T+ + L+ACAN+ +L GK+IH F++R + ++ A
Sbjct: 532 PEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESA 591
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y+KC L+ A RVF + + NS+I + ++ R +++L +F M +GI+PD
Sbjct: 592 LIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPD 651
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+TF I+ AC H G V + +F M + GI+ ++EHY CM+ L+ R G + E +
Sbjct: 652 HVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMI 711
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
N MPF+P + + CR +G L E A+R L +L+P + + +N
Sbjct: 712 NSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSN 762
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 278/590 (47%), Gaps = 38/590 (6%)
Query: 4 NAATILKNILSKSSPK----PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIV 59
N ++I K L ++ K T S + K + + +D+ ++ L + + Q C +
Sbjct: 5 NLSSIYKCFLPSTTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVS-ILQTCTDPSGLS 63
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ R+ + ++ L + + Y CG DA+ +F ++ WN M+ +T
Sbjct: 64 QGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFT 123
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G L + M G ++ T+ V+++ + + + +H I GF +V
Sbjct: 124 MMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVF 183
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ SSL+ Y + + DAR +FD + +K+ V WNV++ Y+ G+ A +F +M R +
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE 243
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
P + TFA L C+ G Q+HG+++ E D V +L MY KCG L DAR
Sbjct: 244 TNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDAR 303
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L D + ++++W ++SGY +G + EA LF+EM +
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARM------------------ 345
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
D +T L + + + ++ GKE+H +I RN S ++F+ +AL+D
Sbjct: 346 -------------KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALID 392
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKF 478
+Y KC ++ AR F Q + D V A+++GY G + A+ F +Q R +
Sbjct: 393 IYFKCRDVEMARKIFDQRTP-VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 451
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T ++L ACA +++L GK++H +++N + + A++++Y KC L+ A + F
Sbjct: 452 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 511
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
S D + NSMI N + EA+++F M G K D ++ L AC
Sbjct: 512 SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 3/261 (1%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
IL C S + G++ H + N N + LL MY CG A+ FYQ+
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
+ WN ++ G+ GQ + A+ + +M T P K+TF ++ AC ++S+ G+ +H
Sbjct: 112 SE-PWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ +E++V +L++ Y++ C+ A +F S D ++ N M+ G+ N
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
A VF M++ P+ +TF +L C E + Q + G+ +
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ-LHGLVVSSGLEMDSPVANTL 289
Query: 621 IKLYCRYGYMKELEDFVNRMP 641
+ +Y + G++ + + MP
Sbjct: 290 LAMYAKCGHLFDARRLFDMMP 310
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 7/186 (3%)
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
++L C + S L QG+Q H ++ N N + L+ +Y C A +F +
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
N MI GF + AL + M G PD TF ++ AC +V L
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
D ++ G + +IK Y G + + +RMP V NGY
Sbjct: 171 DKIQF-MGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGV------LWNVMLNGY 223
Query: 662 ATLGEW 667
G+W
Sbjct: 224 VKNGDW 229
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 203/649 (31%), Positives = 329/649 (50%), Gaps = 33/649 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y + C++SKA+ + + S++ + V + N I Y +CG+L AR LF
Sbjct: 331 TTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYT 390
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+RD SWNA++ Y + G + L+ M GV ++T+ ++L + A
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +H I++ G N L ++L++ Y +C + +A+ +F+ Q ++ +SWN ++ +
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G+ + A +F +M E++ P N TFA+ L C + G QIHG I + + D +
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L MY++CG L+DAR + R+++SWT+++ G A G +A ELF
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF--------- 621
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W G+ + K T IL VC + + GK+V +I
Sbjct: 622 -WQMQNEGF-----------------RPVKS----TFSSILKVCTSSACLDEGKKVIAYI 659
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ Y + V NAL+ Y K G++ AR F +M RD VSWN ++ GYA+ G + A
Sbjct: 660 LNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS-RDIVSWNKIIAGYAQNGLGQTA 718
Query: 463 MTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ +MQ + P+KF+F +LL AC++ S+LE+GK++H +++ + +V AL+ +
Sbjct: 719 VEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISM 778
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC A VF +V+ N+MI + + +AL F M+KEGIKPD TF
Sbjct: 779 YAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTF 838
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
IL AC H G V Q F SM +YG++P +EHY C++ L R +E E +N+MP
Sbjct: 839 TSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMP 898
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F P + + CR +G L E AA +LN P + + +N +
Sbjct: 899 FPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVY 947
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 318/632 (50%), Gaps = 51/632 (8%)
Query: 10 KNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLV 69
+++ + P+PT ++ T Y L Q C + + EA+++ + +V
Sbjct: 12 EDVSNTHQPRPTETERAT-----------------YVALLQNCTRKRLLPEAKRIHAQMV 54
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
+ P +FL N I Y KC ++ DA +F EMP RD SWN+++ Y Q GF + +
Sbjct: 55 EAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQ 114
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
LF +M ++G N+ITY ++L + EL K++H I+K G+ + +++SL+ YG
Sbjct: 115 LFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYG 174
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + AR++F I ++ VS+N ++ Y KE + +F +M E I P T+ N
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYIN 234
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L A + S EG +IH + ++ D V +L M V+CG ++ A+ +R+
Sbjct: 235 LLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRD 294
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++ + ++++ A G EA E + + MR
Sbjct: 295 VVVYNALIAALAQHGHNVEAFEQY-------------------------------YRMRS 323
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+++ T ILN C+ ++ GK +H I + +SS++ + NAL+ MY +CG+L
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
AR FY M +RD +SWNA++ GYARR EAM + +MQ E +P + TF LL+ACA
Sbjct: 384 ARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
N S+ GK IH ++R+ + N AL+ +Y +C L A VF+ + + DVI NS
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI G + A ++F M+ E ++PD+ITF +L C + ++L Q + +
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRI-TES 561
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
G+ + +I +Y R G +++ + + +
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 342/680 (50%), Gaps = 66/680 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A ++C + ++ +++ S L+ F+ N I+ Y KC + + +FDEM
Sbjct: 279 FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG 338
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ +WN+++ A Q G L LFL M SG +N+ ++L +SA ++G ++
Sbjct: 339 ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRE 398
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LHG +V+ ++IL S+LVD Y KC ++ +A ++F + +N VS+N ++ Y+ G
Sbjct: 399 LHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGK 458
Query: 225 GKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA+ ++ M ED I+P FTF L C+ + +G QIH +I+ + + +V
Sbjct: 459 AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVET 518
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L MY +C GR+ A+E+FN M ERN S
Sbjct: 519 ELVHMYSEC-------------------------------GRLNYAKEIFNRMAERNAYS 547
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN+M+ GY ++ +EAL M+ D +L +L+ C LS+ + G+E+H FI
Sbjct: 548 WNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIV 607
Query: 404 RNDYSSNIFVSNALLDMYRKCGNL-------------------------------RSARI 432
RN + L+DMY KCG++ A+
Sbjct: 608 RNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKN 667
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
F QM QR + WN++L GYA +G +E+ F EM + + T T++ C+++
Sbjct: 668 LFDQMEQRNTAL-WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLP 726
Query: 492 SLEQGKQIHCFVIRNCY-EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+LE G Q+H +I+ + +VV ALV++Y+KC + A VF + +++ N+MI
Sbjct: 727 ALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMI 786
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ + +EAL ++ M K+G+ P+ +TF IL AC H G V+ L+ F SM+ Y I
Sbjct: 787 SGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNI 846
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
+ EHY CM+ L R G +++ ++FV +MP P V + CR + +G AA+
Sbjct: 847 EAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQ 906
Query: 671 RLNELNPWAPFQFKITTNRF 690
RL EL+P P + I +N +
Sbjct: 907 RLFELDPQNPGPYVIMSNIY 926
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 307/593 (51%), Gaps = 47/593 (7%)
Query: 3 GNAATILK-NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEA 61
G+ T +K SPKPT S H K V+ Y+ L Q C S +
Sbjct: 40 GHTTTTIKLKFNGPDSPKPT---------SIHTKPASDVNPLPYSSLIQDCIDSNSFQRG 90
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD---ARGLFDEMPERDGGSWNAMLGAY 118
+ + + +++ P +L+ + + Y + G LDD AR LF+EMPER+ +WN M+ AY
Sbjct: 91 KSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAY 150
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ L L+ M SG +++ T+ +V+++ ++G +QL +VK G N+
Sbjct: 151 ARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNL 210
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ +LVD Y + M DA D+I+ + V+WN ++ Y+ + +EA +F +ML+
Sbjct: 211 FVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKI 270
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ P NFTFA+AL C L S G Q+H +I F+GD V +L +MY KC E
Sbjct: 271 GVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESC 330
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ D+ ERN ++W SI+S A G +A LF M E +GY
Sbjct: 331 LKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE----------SGYKS----- 375
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
++ LG IL AGL++I G+E+HG + RN +S+I + +AL+
Sbjct: 376 ----------------NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALV 419
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPS 476
DMY KCG + A F + + R++VS+NA+L GY + G++EEA+ + +MQ E +P
Sbjct: 420 DMYSKCGMVEEAHQVFRSLLE-RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPD 478
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+FTF TLL CAN + QG+QIH +IR N++ LV +Y++C L YA +F
Sbjct: 479 QFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFN 538
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
+ + NSMI G+ N +EAL +F M+ GIKPD + +L +C+
Sbjct: 539 RMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 591
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 239/507 (47%), Gaps = 44/507 (8%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD---AR 198
N + Y+++++ + K +H ++ G+ + L + ++ Y + + D AR
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++F+++ +N +WN ++ Y + E + ++ +M FTF + + AC
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC---- 185
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
I D G + S+ + + C N+ ++V
Sbjct: 186 -----------IAMEDMGGVRQLQSSVVKAGLNC----------------NLFVGGALVD 218
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GYA G + +A +E+ +V++WNA++AGY + L W+EA M K D T
Sbjct: 219 GYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFT 278
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L VC L GK+VH + + + FV NAL+DMY KC + S F +M
Sbjct: 279 FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG 338
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
+ R++V+WN++++ A+ G +A+ F MQ + ++F ++L A A ++ + +G+
Sbjct: 339 E-RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
++H ++RN +++ ALV++Y+KC +E A +VF+ + + N+++ G+
Sbjct: 398 ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEG 457
Query: 558 RGREALEVFGLMKKE-GIKPDHITFHGILLACIHEGNVKLALQFFDSM---RCKYGIIPQ 613
+ EALE++ M+ E GI+PD TF +L C ++ N Q + II +
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 517
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRM 640
E ++ +Y G + ++ NRM
Sbjct: 518 TE----LVHMYSECGRLNYAKEIFNRM 540
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 322/631 (51%), Gaps = 33/631 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C S A+ R++ + V + N + Y KCG++ +AR +FD+M +
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS 309
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW ++G Y G E+F M GV N+ITY NVL + + L K +H
Sbjct: 310 VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHS 369
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+ G ++ + ++LV Y KC D R++F+ + N++ ++WN ++ GN +E
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEE 429
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A ++ +M RE + P T+ L AC ++ + G +IH ++K F D V +L
Sbjct: 430 ASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALIS 489
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY +CG I++AR LFN+M +++ISW AM
Sbjct: 490 MYARCGS-------------------------------IKDARLLFNKMVRKDIISWTAM 518
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ G +S L EAL M++ ++VT ILN C+ + + G+ +H +
Sbjct: 519 IGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGL 578
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++ V+N L++MY CG+++ AR F +M+QR D V++NA++ GYA +EA+ F
Sbjct: 579 ATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR-DIVAYNAMIGGYAAHNLGKEALKLFD 637
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+Q E +P K T+ +L ACAN SLE K+IH V+++ Y + ALV Y KC
Sbjct: 638 RLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCG 697
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
A+ VF + +VI N++I G + RG++ L++F MK EGIKPD +TF +L
Sbjct: 698 SFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLS 757
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G ++ ++F SM +GI P +EHY CM+ L R G + E+E + MPF
Sbjct: 758 ACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANT 817
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + CR +G + E AA +L+P
Sbjct: 818 RIWGALLGACRIHGNVPVAERAAESSLKLDP 848
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 199/390 (51%), Gaps = 12/390 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C + A+ R++ S +V + + N I Y +CG++ DAR LF++M
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMV 508
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SW AM+G ++G L +F DM +G+ N++TY ++L + + L ++
Sbjct: 509 RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRR 568
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++ G + + ++LV+ Y C + DAR++FD + ++ V++N ++ Y
Sbjct: 569 IHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNL 628
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
GKEA+ +F ++ E ++P T+ N L AC+ S +IH +++K + D + +
Sbjct: 629 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNA 688
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERN 340
L Y KCG DA + D+ +RN+ISW +I+ G A GR ++ +LF M + +
Sbjct: 689 LVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPD 748
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRK---TTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++++ ++L+ + + L +E + M + T I+ G ++++ ++ E
Sbjct: 749 IVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEH--YGCMVDLLGRAGQL---DE 803
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
V I + +N + ALL R GN+
Sbjct: 804 VEALIKTMPFQANTRIWGALLGACRIHGNV 833
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 178/329 (54%), Gaps = 5/329 (1%)
Query: 315 SIVSGYAISGRIREARELFNEM--PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
++++ Y G I EAR+++N++ ER V SWNAM+ GY + +EAL + M++
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ + T +L+ C S ++ G+E+H + ++ V+N +L+MY KCG++ AR
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F +M + + VSW ++ GYA G SE A F +MQ E P++ T+ +L A + +
Sbjct: 301 VFDKM-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L+ GK +H ++ +E ++ ALV++Y KC + +VF++ + D+I N+MI
Sbjct: 360 ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 419
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G EA E++ M++EG+ P+ IT+ +L AC++ + + S K G +
Sbjct: 420 GLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH-SRVVKDGFM 478
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ +I +Y R G +K+ N+M
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKM 507
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 7/286 (2%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A+D V +++ ++ +L C + ++ G+EVH I ++ + + NAL++
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 420 MYRKCGNLRSAR-IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SK 477
MY +CG++ AR +W R SWNA++ GY + G EEA+ EMQ +
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T LL++C + S+LE G++IH ++ +V ++ +Y KC + A VF +
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ V+ +I G+ A E+F M++EG+ P+ IT+ +L A +K
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE----LEDFVNR 639
+ S G L ++K+Y + G K+ E VNR
Sbjct: 365 -KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNR 409
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/662 (30%), Positives = 344/662 (51%), Gaps = 45/662 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P P + N A+ + G+LD AR L DEMP+R+ SWN ++ A ++ G LEL+
Sbjct: 70 PRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYE 129
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ T A+VL + L ++ HGL VK G N+ +E++L+ Y KC
Sbjct: 130 GMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCG 189
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA R+FD + + N VS+ ++ + AG+ +A+ +F +M R +R ++ L
Sbjct: 190 GVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLG 249
Query: 253 ACS-FLSSPYE-------GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+C+ +S ++ G IH +I++ F D V SL +MY KC ++++A + D
Sbjct: 250 SCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDS 309
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPE--------------------RNVIS- 343
+ +SW +++G+ +G +A E+ N M E R+V+S
Sbjct: 310 LPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSA 369
Query: 344 --------------WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
WN +L+GY + L ++ ++ M+ D+ TL +IL+ C+ L
Sbjct: 370 RAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRL 429
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ +G +VH R +++FV++ L+DMY KCG + ARI F +M++ RD V WN++
Sbjct: 430 GILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTE-RDVVCWNSM 488
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++G A +EEA F +M+ P++ ++ +++ +CA +SS+ QG+QIH ++++ Y
Sbjct: 489 ISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGY 548
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ NV AL+++Y KC ++ A F + +++ N MI G+ N G +A+++F
Sbjct: 549 DQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEY 608
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M +PD +TF +L C H G V A+ FF+SM YGI P EHY C+I R G
Sbjct: 609 MLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAG 668
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ E+E ++ MP + + C + A LGE AA+ L L+P P + + +N
Sbjct: 669 RLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSN 728
Query: 689 RF 690
+
Sbjct: 729 IY 730
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 31/288 (10%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
++ S V F +F+ + ++ Y KCG + AR +F+ M ERD WN+M+ +
Sbjct: 437 QVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHS 496
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+ F M +G+ + +YA+++ S A + +Q+H IVK G+ NV + S
Sbjct: 497 LNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGS 556
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+D Y KC M DAR FD + KN V+WN ++ Y G G++AV +F ML + RP
Sbjct: 557 ALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRP 616
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
TF L CS G + E +E G+
Sbjct: 617 DGVTFIAVLTGCSH-------------------------SGLVDEAIAFFNSMESTYGIT 651
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLA 349
+ +T ++ G +GR+ E L + MP + + I W +LA
Sbjct: 652 PLAEH-----YTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLA 694
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 337/653 (51%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y L + + C ++ + R + + +F+ N I Y +CG+ A
Sbjct: 141 PTPYVL-SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAER 199
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F +MP RD ++N ++ + Q G LE+F +M SG+S + +T +++L + A +
Sbjct: 200 VFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L QLH + K G + I+E SL+D Y KC + A +F+ N V WN+++
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + ++ +F +M IRP FT+ L C+ G QIH + +K FE D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V G L +MY K G LE AR +L+ + E
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEM-------------------------------LKE 408
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW +M+AGY + K+AL M+K D + L ++ CAG++ ++ G ++
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I+ + YS ++ + NAL+++Y +CG +R A F ++ + +D+++WN +++G+A+ G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGL 527
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ F M Q + + FTF + L+A AN++ ++QGKQIH VI+ + A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC E A F E S + + N++I + RG EAL++F MKKEGIKP+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF G+L AC H G V+ L +F SM +YGI P+ +HY C+I ++ R G + + F+
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP + R + C+ + +GE+AA+ L EL P + + +N +
Sbjct: 708 EEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 262/556 (47%), Gaps = 40/556 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F+E+ RD SW AML Y QNG L L+ M+ +GV
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++VL S + + +H K GFC + + ++++ Y +C A R+
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ +++ V++N ++ + G+G+ A+ +F +M + P T ++ L AC+ L
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H + K D ++ GSL ++YVKCG +E A + + D N++ W ++ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ ++ ELF +M + +Q T
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRP-------------------------------NQFTYP 349
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C EI +G+++H + + S+++VS L+DMY K G L AR +M +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR-RVLEMLKE 408
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
+D VSW +++ GY + ++A+ +F EMQ W P + ++ CA I+++ QG
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW---PDNIGLASAISGCAGINAMRQG 465
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH + + Y +V ALV +Y +C + A F+E D I N ++ GF +
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL+VF M + G+K + TF L A + +K Q + K G + E
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEV 584
Query: 617 YECMIKLYCRYGYMKE 632
+I LY + G ++
Sbjct: 585 GNALISLYGKCGSFED 600
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 247/533 (46%), Gaps = 37/533 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGV 161
M R S L + + P + L LF D + +A LR+ V
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++H V RG I+ + L+D Y K ++ ARR+F+++ ++ VSW ++ Y
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G G+EA+ ++ +M R + P + ++ L +C+ +G IH K F + V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
++ +Y++CG A R D P R+ +++ +++SG+A G A E+F EM
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMP-HRDTVTFNTLISGHAQCGHGEHALEIFEEM---- 235
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+G + D VT+ +L CA L +++ G ++H
Sbjct: 236 ------QFSGLSP---------------------DCVTISSLLAACASLGDLQKGTQLHS 268
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++ + SS+ + +LLD+Y KCG++ +A + F S R + V WN +L + +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF-NSSDRTNVVLWNLMLVAFGQINDLA 327
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
++ F +MQ RP++FT+ +L C ++ G+QIH ++ +E ++ G L+
Sbjct: 328 KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLI 387
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y+K LE A RV + DV+ SMI G+ +E ++AL F M+K GI PD+I
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ C ++ LQ + G + + ++ LY R G ++E
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIRE 499
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 337/653 (51%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y L + + C ++ + R + + +F+ N I Y +CG+ A
Sbjct: 141 PTPYVL-SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAER 199
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F +MP RD ++N ++ + Q G LE+F +M SG+S + +T +++L + A +
Sbjct: 200 VFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L QLH + K G + I+E SL+D Y KC + A +F+ N V WN+++
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + ++ +F +M IRP FT+ L C+ G QIH + +K FE D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V G L +MY K G LE AR +L+ + E
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEM-------------------------------LKE 408
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW +M+AGY + K+AL M+K D + L ++ CAG++ ++ G ++
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I+ + YS ++ + NAL+++Y +CG +R A F ++ + +D+++WN +++G+A+ G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGL 527
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ F M Q + + FTF + L+A AN++ ++QGKQIH VI+ + A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC E A F E S + + N++I + RG EAL++F MKKEGIKP+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF G+L AC H G V+ L +F SM +YGI P+ +HY C+I ++ R G + + F+
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP + R + C+ + +GE+AA+ L EL P + + +N +
Sbjct: 708 EEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 262/556 (47%), Gaps = 40/556 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F+E+ RD SW AML Y QNG L L+ M+ +GV
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++VL S + + +H K GFC + + ++++ Y +C A R+
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ +++ V++N ++ + G+G+ A+ +F +M + P T ++ L AC+ L
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H + K D ++ GSL ++YVKCG +E A + + D N++ W ++ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ ++ ELF +M + +Q T
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRP-------------------------------NQFTYP 349
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C EI +G+++H + + S+++VS L+DMY K G L AR +M +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR-RVLEMLKE 408
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
+D VSW +++ GY + ++A+ +F EMQ W P + ++ CA I+++ QG
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW---PDNIGLASAISGCAGINAMRQG 465
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH + + Y +V ALV +Y +C + A F+E D I N ++ GF +
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL+VF M + G+K + TF L A + +K Q + K G + E
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEV 584
Query: 617 YECMIKLYCRYGYMKE 632
+I LY + G ++
Sbjct: 585 GNALISLYGKCGSFED 600
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 247/533 (46%), Gaps = 37/533 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGV 161
M R S L + + P + L LF D + +A LR+ V
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++H V RG I+ + L+D Y K ++ ARR+F+++ ++ VSW ++ Y
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G G+EA+ ++ +M R + P + ++ L +C+ +G IH K F + V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
++ +Y++CG A R D P R+ +++ +++SG+A G A E+F EM
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMP-HRDTVTFNTLISGHAQCGHGEHALEIFEEM---- 235
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+G + D VT+ +L CA L +++ G ++H
Sbjct: 236 ------QFSGLSP---------------------DCVTISSLLAACASLGDLQKGTQLHS 268
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++ + SS+ + +LLD+Y KCG++ +A + F S R + V WN +L + +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF-NSSDRTNVVLWNLMLVAFGQINDLA 327
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
++ F +MQ RP++FT+ +L C ++ G+QIH ++ +E ++ G L+
Sbjct: 328 KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLI 387
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y+K LE A RV + DV+ SMI G+ +E ++AL F M+K GI PD+I
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ C ++ LQ + G + + ++ LY R G ++E
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIRE 499
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 302/552 (54%), Gaps = 34/552 (6%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ---------------- 205
+K+LH LI+K L ++L++AY K +T AR +FD +
Sbjct: 24 AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83
Query: 206 ---------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFAN 249
N++ VSWN ++ Y+ G+ EAV + M+++ + LN TF+
Sbjct: 84 SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L S G QIHG I+K F V SL +MY K G + A + D+ ERN
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++ + ++++G SG +++++ LF+ M ER+ ISW M+ G ++ L EA+D MR+
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+DQ T G +L C GL +K GKE+H I R+ Y+ N+FV +AL+DMY KC ++R
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A F +M+ ++ VSW A+L GY + G SEEA+ F +MQ P FT +++++CA
Sbjct: 324 AEAVFKRMAN-KNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
N++SLE+G Q HC + + + AL+ +Y KC +E + ++F E S D + +
Sbjct: 383 NLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTA 442
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
++ G+ + E +++F M +G+KPD +TF +L AC G V+ Q+F+SM +
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
GIIP +HY CMI L+ R G ++E ++F+N+MPF+P + CR G +G+WA
Sbjct: 503 GIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWA 562
Query: 669 ARRLNELNPWAP 680
A L EL+P P
Sbjct: 563 AESLLELDPQNP 574
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/513 (29%), Positives = 245/513 (47%), Gaps = 96/513 (18%)
Query: 50 QLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
+LC ++ +A+KL ++ P FL N I Y K GN+ AR +FD+MP+ +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDM-NHSGVS---------------------------- 140
SWN ML AY+++G E+F M N GVS
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 141 ---ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
N+IT++ +L + + + + +Q+HG IVK GF V + SSLVD Y K +++ A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAG-----------------------------NGKEA 228
++FD++Q +N V +N ++ L +G NG EA
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 229 VVM--FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
M F M +E + +TF + L AC L + EG +IH +II+ + + V +L
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+MY KC + A + + +N++SWT+++ GY +G EA +F +M +RN I
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM-QRNGI---- 367
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+ D TLG +++ CA L+ ++ G + H +
Sbjct: 368 --------------------------EPDDFTLGSVISSCANLASLEEGAQFHCQALVSG 401
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
S I VSNAL+ +Y KCG++ + F +MS RD+VSW A+++GYA+ G++ E + F
Sbjct: 402 LISFITVSNALITLYGKCGSIEDSNQLFDEMS-FRDEVSWTALVSGYAQFGKANETIDLF 460
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
M + +P TF +L+AC+ +E+G+Q
Sbjct: 461 ERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQ 493
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 222/440 (50%), Gaps = 45/440 (10%)
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+ ++H +IIK + + +L Y K G + AR + D+ + N SW +++S Y+
Sbjct: 23 QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLG 380
SG + +E+F+ MP R+ +SWN++++GY EA+ + +M+ +++++T
Sbjct: 83 KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L + + + +G+++HG I + + + +FV ++L+DMY K G + A F ++ +R
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202
Query: 441 ------------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
RD +SW ++TG + G EAM F +M+
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262
Query: 471 WETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
E ++TF ++L AC + +L++GK+IH +IR+ Y NV ALV++Y KC +
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
YA VFK ++ +V+ +M++G+ N EA+ VF M++ GI+PD T ++ +C
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382
Query: 590 HEGNVKLALQFFDSMRCKY---GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ +++ QF C+ G+I + +I LY + G +++ + M F V
Sbjct: 383 NLASLEEGAQF----HCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEV 438
Query: 647 PMLRKIFDKCRKNGYATLGE 666
+ +GYA G+
Sbjct: 439 SWTALV------SGYAQFGK 452
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 197/433 (45%), Gaps = 50/433 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I + G + D++ LF M ERD SW M+ QNG ++LF DM
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G++ +Q T+ +VL + L K++H LI++ G+ NV + S+LVD Y KC +
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + NKN VSW ++ Y G +EAV +F M R I P +FT + + +C+
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+S EG Q H + V +L +Y KCG +ED+ L D+ R+ +SWT++
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
VSGYA G+ E +LF M + + D
Sbjct: 444 VSGYAQFGKANETIDLFERMLVQGL-------------------------------KPDA 472
Query: 377 VTLGLILNVCAGLSEIKMGKEV-------HGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
VT +L+ C+ ++ G++ HG I +D+ + ++D++ + G L
Sbjct: 473 VTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYT------CMIDLFGRAGRLEE 526
Query: 430 ARIWFYQMSQRRDKVSWNAVLTG---YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAA 486
A+ + +M D + W +L+ Y + A S E+ + ++ AA
Sbjct: 527 AKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAA 586
Query: 487 ---CANISSLEQG 496
+N++ L +G
Sbjct: 587 KGKWSNVAQLRRG 599
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 14/288 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C +A+ E +++ + ++ VF+ + ++ Y KC ++ A +F M
Sbjct: 273 FGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMA 332
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW AML Y QNGF + +F DM +G+ + T +V+ S A L Q
Sbjct: 333 NKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H + G + + ++L+ YGKC + D+ ++FD++ ++ VSW +V Y G
Sbjct: 393 FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGK 452
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
E + +F +ML + ++P TF L ACS G Q HG+I D
Sbjct: 453 ANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDH-- 510
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISG 324
+ +++ + GRLE+A+ +++ P + I W +++S + G
Sbjct: 511 ----YTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C + Q K++HC +I++ L+ Y+K + YA VF + +
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+M+ + + E+F +M D ++++ ++ + G+V A++ ++SM
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNR----DGVSWNSLISGYVCYGSVVEAVKTYNSM 128
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/608 (31%), Positives = 324/608 (53%), Gaps = 33/608 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC LD + F MPE++ SW+A++ QN LELF +M +GV +Q
Sbjct: 216 LDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+A+V RS A L + QLHG +K F +V++ ++ +D Y KC ++DA+++F+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N N S+N I+ Y + G EA+ MF + + + + + A AC+ + EG
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG 395
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+HG+ +K + + V ++ +MY KCG L
Sbjct: 396 LQVHGLSMKSLCQSNICVANAILDMYGKCGAL---------------------------- 427
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F EM R+ +SWNA++A + ++ ++ L M ++ + D+ T G +L
Sbjct: 428 ---VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVL 484
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAG + G E+H I ++ + FV AL+DMY KCG + A +++++
Sbjct: 485 KACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT-V 543
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA+++G++ + QSEEA +FS+M + P FT+ T+L CAN+ ++E GKQIH
Sbjct: 544 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 603
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+I+ + + LV++Y+KC ++ +F+++ + D + N+M+ G+ + G EA
Sbjct: 604 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 663
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L++F M+ E +KP+H TF +L AC H G V+ L +F SM YG+ PQLEHY C++
Sbjct: 664 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVD 723
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
+ R G + + + + MPF + R + C+ +G + E AA + +L P
Sbjct: 724 IMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAA 783
Query: 683 FKITTNRF 690
+ + +N +
Sbjct: 784 YVLLSNIY 791
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 322/656 (49%), Gaps = 72/656 (10%)
Query: 21 TPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
+P KTL + ++ P ++H+FQ C+ KA+ ++ + ++ P VF+
Sbjct: 22 SPFKTLPISPFSSYQA-TPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVT 80
Query: 81 NRAIECYGKC-------------------------------GNLDDARGLFDEMPERDGG 109
N I+ Y KC G++ A+ LFD MPERD
Sbjct: 81 NCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVV 140
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
SWN+++ Y NG + +++FL M G ++ T+A VL+S + + G Q+HGL
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK GF +V+ S+L+D Y KC + + + F + KN VSW+ I+ + + + +
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT-EM 288
+F +M + + TFA+ +C+ LS+ G Q+HG +K DF G DVV+G+ T +M
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDF-GTDVVIGTATLDM 319
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y+KC L DA+ L + N+ S+ +I+ GYA S + EA +F
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFR-------------- 365
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
L++K+ +D+V+L CA + G +VHG ++
Sbjct: 366 -----------------LLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 408
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
SNI V+NA+LDMY KCG L A + F +M RD VSWNA++ + + G E+ ++ F
Sbjct: 409 SNICVANAILDMYGKCGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEEKTLSLFVW 467
Query: 469 M-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M Q P +FT+ ++L ACA +L G +IH +I++ ++ AL+++Y+KC
Sbjct: 468 MLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGM 527
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+E A ++ + V+ N++I GF ++ EA + F M + G+ PD+ T+ IL
Sbjct: 528 MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 587
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHY--ECMIKLYCRYGYMKELEDFVNRMP 641
C + V+L Q + K Q + Y ++ +Y + G M++ + + P
Sbjct: 588 CANLVTVELGKQIHAQIIKKE---LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 250/560 (44%), Gaps = 67/560 (11%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+ P +TL + ++ + T++++ + ++ L KQ H ++ F V
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV------------------------- 214
+ + L+ Y KC + A ++FD + ++ VSWN
Sbjct: 79 VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138
Query: 215 ------IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
++ YL G+ ++ + +F +M R TFA L +CS L G+QIHG
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+ +K+ F+ D V +L +MY KC +L+ + E+N +SW++I++G + +R
Sbjct: 199 LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
ELF EM + V + Q T + CAG
Sbjct: 259 GLELFKEMQKAGV-------------------------------GVSQSTFASVFRSCAG 287
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
LS +++G ++HG + D+ +++ + A LDMY KC NL A+ F + + S+NA
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ-SYNA 346
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ GYAR + EA+ F +Q + + ACA I +G Q+H +++
Sbjct: 347 IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSL 406
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ N+ A++++Y KC L A VF+E S D + N++I N + L +F
Sbjct: 407 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFV 466
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYECMIKLYCR 626
M + G++PD T+ +L AC + ++ + ++ + G+ + +I +Y +
Sbjct: 467 WMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG--IALIDMYSK 524
Query: 627 YGYMKELEDFVNRMPFNPTV 646
G M++ E +R+ V
Sbjct: 525 CGMMEKAEKLHDRLAEQTVV 544
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 162/306 (52%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ CA K +E ++ + + + N ++ YGKCG L +A +F+EM RD
Sbjct: 383 FRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 442
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWNA++ A+ QNG +TL LF+ M SG+ ++ TY +VL++ A L ++H
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
I+K + + +L+D Y KC +M A ++ D + + VSWN I+ + + +EA
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
F KML + P NFT+A L C+ L + G QIH IIK + + D + +L +M
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDM 622
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KCG ++D + + ++ R+ ++W ++V GYA G EA ++F M NV +A
Sbjct: 623 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 682
Query: 349 AGYTRS 354
R+
Sbjct: 683 LAVLRA 688
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
S+ KT S L+ YA + CA+ + +++ + ++ ++ +
Sbjct: 559 SEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISST 618
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
++ Y KCGN+ D + +F++ P RD +WNAM+ Y Q+G L++F M V N
Sbjct: 619 LVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPN 678
Query: 143 QITYANVLRSSAEE--LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
T+ VLR+ +E G+ H ++ G + S +VD G+ ++ A +
Sbjct: 679 HATFLAVLRACGHMGLVEKGL-HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 737
Query: 201 FDDIQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ + +AV W ++ + GN + A + +L+
Sbjct: 738 IEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQ 775
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/637 (29%), Positives = 324/637 (50%), Gaps = 33/637 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S Y +L C S +++ +K+ +++ P + L N + YGKCG+L DAR FD
Sbjct: 158 STYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDT 217
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M R+ SW M+ Y+QNG + +++ M SG + +T+ +++++ ++ +
Sbjct: 218 MQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLG 277
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+QLHG ++K G+ ++I +++L+ Y + + A +F I K+ +SW ++ +
Sbjct: 278 RQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQL 337
Query: 223 GNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G EA+ +F M R+ +P F F + AC L P G QIHG+ K
Sbjct: 338 GYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFG------- 390
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
LG RN+ + S+ YA G + A F ++ ++
Sbjct: 391 LG------------------------RNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDL 426
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWNA++A ++ S EA+ F M T D +T +L C I G ++H +
Sbjct: 427 VSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSY 486
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I + V N+LL MY KC NL A F +S+ + VSWNA+L+ + Q+ E
Sbjct: 487 IIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGE 546
Query: 462 AMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
F M + E +P T T+L CA ++SLE G Q+HCF +++ ++V L++
Sbjct: 547 VFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLID 606
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC L++A VF + + D++ +S+I+G+ G EAL +F +MK G++P+ +T
Sbjct: 607 MYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVT 666
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ G+L AC H G V+ F+++M + GI P EH CM+ L R G + E E+F+ +M
Sbjct: 667 YLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKM 726
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
FNP + M + + C+ +G + E AA + +L+P
Sbjct: 727 GFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDP 763
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 239/502 (47%), Gaps = 34/502 (6%)
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+S + TY N++ + L K++H I+K +++L++ +++ YGKC +
Sbjct: 150 NSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLK 209
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
DAR+ FD +Q +N VSW +++ Y G +A++M+ +ML+ P TF + + AC
Sbjct: 210 DARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACC 269
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
G Q+HG +IK ++ + +L MY + G++ A + +++ISW S
Sbjct: 270 IAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWAS 329
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++G+ G EA LF +M + N +F+F
Sbjct: 330 MITGFTQLGYEIEALYLFRDMFRQGFYQPN----------------EFIF---------- 363
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
G + + C L E + G+++HG + N+F +L DMY K G L SA FY
Sbjct: 364 ----GSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFY 419
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
Q+ + D VSWNA++ ++ G EA+ F +M P TF +LL AC + ++
Sbjct: 420 QI-ESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTIN 478
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QG QIH ++I+ + +L+ +YTKC L A VFK+ S ++ + IL C
Sbjct: 479 QGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSAC 538
Query: 555 -HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+++ E +F LM KPD+IT IL C ++++ Q K G++
Sbjct: 539 LQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQ-VHCFSVKSGLVVD 597
Query: 614 LEHYECMIKLYCRYGYMKELED 635
+ +I +Y + G +K D
Sbjct: 598 VSVSNRLIDMYAKCGSLKHARD 619
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 150/277 (54%), Gaps = 5/277 (1%)
Query: 357 WKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
++EALD F F + ++ ++ T G ++ C + +K GK++H I +++ ++ + N
Sbjct: 137 YREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQN 196
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETR 474
+L+MY KCG+L+ AR F M Q R+ VSW +++GY++ GQ +A+ + +M Q
Sbjct: 197 HILNMYGKCGSLKDARKAFDTM-QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYF 255
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P TF +++ AC ++ G+Q+H VI++ Y+ +++ + AL+ +YT+ + +A V
Sbjct: 256 PDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDV 315
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGN 593
F S+ D+I SMI GF EAL +F M ++G +P+ F + AC
Sbjct: 316 FTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLE 375
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ Q M K+G+ + + +Y ++G++
Sbjct: 376 PEFGRQ-IHGMCAKFGLGRNVFAGCSLCDMYAKFGFL 411
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSF------SEMQWETRPSKFTFETLLAACANI 490
+ Q ++S N+ + ++ EA+ +F S +Q E+ T+ L+ AC +I
Sbjct: 115 IKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESS----TYGNLILACTSI 170
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
SL+ GK+IH ++++ + ++V + ++ +Y KC L+ A + F +V+ MI
Sbjct: 171 RSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMI 230
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ N + +A+ ++ M + G PD +TF I+ AC G++ L Q + K G
Sbjct: 231 SGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHV-IKSGY 289
Query: 611 IPQLEHYECMIKLYCRYGYMKELED 635
L +I +Y R+G + D
Sbjct: 290 DHHLIAQNALISMYTRFGQIVHASD 314
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 211/657 (32%), Positives = 336/657 (51%), Gaps = 42/657 (6%)
Query: 25 TLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI 84
T + +K DE Y + ++C+ + + R++ VF+ N +
Sbjct: 124 TYNTMVRAGVKPDE----CTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLL 179
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM--NHSGVSAN 142
YG CG DA +FDEMPERD SWN ++G + +GF L F M G+ +
Sbjct: 180 AFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPD 239
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMF 201
+T +VL AE + +++ +H +K G G +V + ++LVD YGKC ++++F
Sbjct: 240 LVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVF 299
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D+I +N +SWN I+ + G +A+ +F M+ E +RP + T ++ L L
Sbjct: 300 DEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFK 359
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
GM++HG +K+ E D + SL +MY K
Sbjct: 360 LGMEVHGFSLKMAIESDVFISNSLIDMYAK------------------------------ 389
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
SG R A +FN+M RN++SWNAM+A + R+ L EA++ V M+ + + VT
Sbjct: 390 -SGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTN 448
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L CA L + +GKE+H I R S ++FVSNAL DMY KCG L A+ F R
Sbjct: 449 VLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNI--SVR 506
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIH 500
D+VS+N ++ GY+R S E++ FSEM+ RP +F +++ACAN++ + QGK+IH
Sbjct: 507 DEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIH 566
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
++R + ++ +L+++YT+C ++ A +VF + DV N+MILG+
Sbjct: 567 GLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELD 626
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
A+ +F MK++G++ D ++F +L AC H G ++ ++F M C I P HY CM
Sbjct: 627 TAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACM 685
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G M+E D + + P + + CR +G LG WAA L EL P
Sbjct: 686 VDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKP 742
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 285/577 (49%), Gaps = 45/577 (7%)
Query: 22 PSKTLTKTISGHLKS--DEPVSYSLYAHLFQLCASSKAIVEARKLES-NLVTFYPTPPVF 78
PS T T + H S + S +L QLC + + +++ + +L+ + V
Sbjct: 12 PSITTPLTKNTHFSSFFSTSLQTSNPPNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVS 71
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMP--ERDGGSWNAMLGAYTQNG-FPGRTLELFLDMN 135
L I Y G+ ++ LF R WN ++ A + G F G + M
Sbjct: 72 LCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVFDG--FGTYNTMV 129
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+GV ++ TY VL+ ++ +E+ +++HG+ K GF G+V + ++L+ YG C +
Sbjct: 130 RAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFG 189
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML--REDIRPLNFTFANALFA 253
DA ++FD++ ++ VSWN ++ + G +EA+ F M+ + I+P T + L
Sbjct: 190 DAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPV 249
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIIS 312
C+ +H +K+ G V +G +L ++Y KCG + ++ + D+ DERN+IS
Sbjct: 250 CAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVIS 309
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W +I++ ++ G+ +A ++F M + MR
Sbjct: 310 WNAIITSFSFRGKYMDALDVFRLMIDEG--------------------------MRP--- 340
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ VT+ +L V L K+G EVHGF + S++F+SN+L+DMY K G+ R A
Sbjct: 341 --NSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIAST 398
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANIS 491
F +M R+ VSWNA++ +AR EA+ +MQ + P+ TF +L ACA +
Sbjct: 399 IFNKMGV-RNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLG 457
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
L GK+IH +IR +++ AL ++Y+KC CL A VF S D + N +I+
Sbjct: 458 FLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVR-DEVSYNILII 516
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
G+ E+L +F M+ G++PD ++F G++ AC
Sbjct: 517 GYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSAC 553
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 9/349 (2%)
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP--ERNVISWNAMLAGYTRSL 355
A LL R++ S++ YA G + LF R+ WN ++ + +
Sbjct: 58 AYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAG 117
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
++ + ++R K D+ T +L VC+ E++ G+EVHG + + ++FV N
Sbjct: 118 VFDGFGTYNTMVRAGVKP-DECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGN 176
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM---QWE 472
LL Y CG A F +M + RDKVSWN V+ + G EEA+ F M +
Sbjct: 177 TLLAFYGNCGLFGDAMKVFDEMPE-RDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPG 235
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYA 531
+P T ++L CA + +HC+ ++ +V ALV+VY KC + +
Sbjct: 236 IQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKAS 295
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+VF E +VI N++I F + +AL+VF LM EG++P+ +T +L
Sbjct: 296 KKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGEL 355
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
G KL ++ K I + +I +Y + G + N+M
Sbjct: 356 GLFKLGME-VHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKM 403
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 170/367 (46%), Gaps = 26/367 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ ++ CA + +++ + ++ + +F+ N + Y KCG L+ A+ +F+ +
Sbjct: 446 FTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-IS 504
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD S+N ++ Y++ +L LF +M G+ + +++ V+ + A + K+
Sbjct: 505 VRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKE 564
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGL+V++ F ++ + +SL+D Y +C + A ++F IQNK+ SWN ++ Y + G
Sbjct: 565 IHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGE 624
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+ +F M + + + +F L ACS +G + ++ ++ E
Sbjct: 625 LDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYAC 684
Query: 285 LTEMYVKCGRLEDA----RGLLDQPDERNIISWTSIVSGYAISGRIR----EARELFNEM 336
+ ++ + G +E+A RGL PD NI W +++ I G I A LF
Sbjct: 685 MVDLLGRAGLMEEAADLIRGLSIIPDT-NI--WGALLGACRIHGNIELGLWAAEHLFELK 741
Query: 337 PERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
P+ + +L+ Y + W EA LM+ + G S +++G
Sbjct: 742 PQH--CGYYILLSNMYAEAERWDEANKVRELMKSRGAKKN-----------PGCSWVQVG 788
Query: 396 KEVHGFI 402
VH F+
Sbjct: 789 DLVHAFL 795
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 196/662 (29%), Positives = 340/662 (51%), Gaps = 45/662 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P P V+ N AI + G+L AR L MP+R+ SWN ++ A ++ PG LE++
Sbjct: 72 PRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYR 131
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G++ T A+VL + L ++ HGL VK G GN +E+ L+ Y KC
Sbjct: 132 GMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCG 191
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA R+FD + + N VS+ ++ +G +A+ +F +M R IR ++ L
Sbjct: 192 SVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLG 251
Query: 253 ACS-FLSSPYE-------GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
AC+ + Y IH ++++ F+ D V SL +MY K ++++A + +
Sbjct: 252 ACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFES 311
Query: 305 PDERNIISWTSIVSGYAISG-----------------------------------RIREA 329
+I+SW +V+GY G + A
Sbjct: 312 MSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSA 371
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R +F+++ + +V +WN +L+GY + L ++ ++ M+ D+ TL +IL+ C+ L
Sbjct: 372 RAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRL 431
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+++GK+VH + +++FV++ L+DMY KCG + A+I F M++R D V WN++
Sbjct: 432 GILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTER-DVVCWNSM 490
Query: 450 LTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++G A +EEA F +M+ P++ ++ +++ +CA +SS+ QG+QIH V+++ Y
Sbjct: 491 ISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGY 550
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ NV +L+++Y KC ++ A F +++ N MI G+ N G +A+E+F
Sbjct: 551 DQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEY 610
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M KPD +TF +L C H G V A+ +F+SM YGI P +EHY C+I R G
Sbjct: 611 MLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAG 670
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
E+ +++MP+ + + C + A LGE+AA+ L L+P P + + +N
Sbjct: 671 RFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSN 730
Query: 689 RF 690
+
Sbjct: 731 IY 732
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 279/603 (46%), Gaps = 79/603 (13%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +++L A + C + A+ + R+ V F+ N + Y KCG++ DA
Sbjct: 140 PTNFTL-ASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVR 198
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD M + S+ AM+G Q+G L LF M+ S + + + ++VL + A+
Sbjct: 199 LFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACA 258
Query: 159 --------LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ +++ +H L+V++GF + + +SL+D Y K M M +A ++F+ + + + V
Sbjct: 259 GDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIV 318
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC---------------- 254
SWN++V Y G + A+ + M P T++N L +C
Sbjct: 319 SWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 378
Query: 255 --------SFLSSPYEGMQIHGVIIKI-------DFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ L S Y ++H I++ + + D L + + G LE +
Sbjct: 379 SKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGK 438
Query: 300 GLLDQPDE----RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ + ++ + ++ Y+ G++ A+ +FN M ER+V+ WN+M++G
Sbjct: 439 QVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHS 498
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L +EA DF MR+ + + ++N CA LS I G+++H + ++ Y N++V +
Sbjct: 499 LNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGS 558
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETR 474
+L+DMY KCGN+ AR++F M ++ V+WN ++ GYA+ G E+A+ F M + +
Sbjct: 559 SLIDMYAKCGNMDDARLFFNCMIV-KNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQK 617
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P TF +L C++ +++ I F N E N R LVE YT CL A+
Sbjct: 618 PDSVTFIAVLTGCSHSGLVDEA--IAYF---NSMESNYGIR-PLVEHYT---CLIDAL-- 666
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
GR A EV ++ K K D I + +L AC+ N
Sbjct: 667 ---------------------GRAGRFA-EVVAVIDKMPYKDDAILWEVLLAACVVHHNA 704
Query: 595 KLA 597
+L
Sbjct: 705 ELG 707
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 193/413 (46%), Gaps = 26/413 (6%)
Query: 270 IIKIDFEGDDVVLGSLTEMY----VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ D +L L E+Y + C L R L +P N+ S+ + +S +G
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRAL-PRP---NVYSYNAAISAACRAGD 91
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ AR+L MP+RN +SWN ++A RS EAL+ M + TL +L+
Sbjct: 92 LAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSA 151
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C ++ + G+ HG + N FV N LL MY KCG++ A F MS ++VS
Sbjct: 152 CGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSP-NEVS 210
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACA-------NIS-SLEQG 496
+ A++ G A+ G ++A+ F+ M R ++L ACA N++ ++
Sbjct: 211 FTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLA 270
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+ IH V+R ++ + +L+++Y K ++ A++VF+ SS+ ++ N ++ G+
Sbjct: 271 QSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQL 330
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
ALEV LM++ G +P+ +T+ +L +CI +V A FD + P +
Sbjct: 331 GCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIS-----KPSVTT 385
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVP---MLRKIFDKCRKNGYATLGE 666
+ ++ Y + ++ + RM P L I C + G LG+
Sbjct: 386 WNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGK 438
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 188/478 (39%), Gaps = 110/478 (23%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS----------------- 211
++ G + L + LV+ Y + A R F + N S
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 212 --------------WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
WN ++ + + EA+ M+ ML+E + P NFT A+ L AC +
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G + HG+ +K+ +G+ V L MY KCG + DA L D N +S+T+++
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G A SG + +A LF M +RS + R + V
Sbjct: 216 GGLAQSGAVDDALRLFARM---------------SRSAI-----------RVDPVAVSSV 249
Query: 378 TLGLILNVCAG----LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
LG CAG I++ + +H + R + S+ V N+L+DMY K + A
Sbjct: 250 -LGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKV 308
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F MS VSWN ++TGY + G E A+ MQ P++ T+ +LA+C
Sbjct: 309 FESMSS-VSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARD 367
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+ + + F + S V N+++ G
Sbjct: 368 VPSARAM-----------------------------------FDKISKPSVTTWNTLLSG 392
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHEGNVKLALQ 599
+ E ++ +E+F M+ + ++PD T IL C +H +VKL L
Sbjct: 393 YGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLH 450
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 196/661 (29%), Positives = 337/661 (50%), Gaps = 40/661 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ Y L Q + +++ + +++ P +FLLN + Y KCG D A+
Sbjct: 16 PLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKK 75
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD MP+R+ SWN+++ YTQ GF + LF + S + ++ T++N L L+
Sbjct: 76 LFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLD 135
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + + +H LI G G V+L +SL+D Y KC + AR +F+ ++VSWN ++
Sbjct: 136 LRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 195
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC--SFLSSPYEGMQIHGVIIKIDFE 276
Y+ G+ E + + KMLR + ++ +AL AC +F SS G +HG +K+ +
Sbjct: 196 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 255
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV +L + Y K G L +A ++F M
Sbjct: 256 LDVVVGTALLDTYAKIGDL-------------------------------EDATKIFKLM 284
Query: 337 PERNVISWNAMLAGYTR-----SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
P+ NV+ +NAM+AG+ + EA+ F M+ + T IL C+ +
Sbjct: 285 PDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEA 344
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ GK++H I + + S+ F+ NAL+++Y G++ F+ + + D VSW +++
Sbjct: 345 FECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS-TPKLDVVSWTSLIV 403
Query: 452 GYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G+ + GQ E +T F E+ + R P +FT +L+ACAN+++++ G+QIH + I+
Sbjct: 404 GHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGN 463
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ + + + +Y KC ++ A FKE+ + D++ + MI + +EA+++F LMK
Sbjct: 464 FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMK 523
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
GI P+HITF G+L+AC H G V+ L++F+ M+ +GI P ++H C++ L R G +
Sbjct: 524 GSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRL 583
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
E E F+ F M R + CR + G+ A R+ EL P A + + N +
Sbjct: 584 AEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIY 643
Query: 691 D 691
+
Sbjct: 644 N 644
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 215/471 (45%), Gaps = 40/471 (8%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ + +TY +++ S L K H ++K F + L ++L+ Y KC A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+++FD + +N VSWN ++ Y G E + +F + D+R FTF+NAL C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G IH +I G ++ SL +MY KCGR++ AR + + DE + +SW S++
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+GY G E L +M + +++
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGL-------------------------------NLNSY 222
Query: 378 TLGLILNVCAG--LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
LG L C S I+ GK +HG + ++ V ALLD Y K G+L A F
Sbjct: 223 ALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFK 282
Query: 436 QMSQRRDKVSWNAVLTGYARRGQ-----SEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
M + V +NA++ G+ + + EAM F EMQ +PS+FTF ++L AC+
Sbjct: 283 LMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACST 341
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
I + E GKQIH + + + + ALVE+Y+ +E ++ F + LDV+ S+
Sbjct: 342 IEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSL 401
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
I+G N + L +F + G KPD T +L AC + VK Q
Sbjct: 402 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQI 452
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 163/366 (44%), Gaps = 22/366 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + + C++ +A +++ + + + F+ N +E Y G+++D F P
Sbjct: 332 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 391
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ D SW +++ + QNG L LF ++ SG ++ T + +L + A + +Q
Sbjct: 392 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 451
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +K G I+++S + Y KC + A F + +N + VSW+V++ G
Sbjct: 452 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 511
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
KEAV +F M I P + TF L ACS EG++ HG+ +
Sbjct: 512 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHS- 570
Query: 278 DDVVLGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ ++ + GRL +A ++D E + + W S++S + R+ +A + +
Sbjct: 571 -----ACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLS----ACRVHKATDTGKRV 621
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
ER + A Y LL+ D M T +I + + GLS I++G
Sbjct: 622 AERVIELEPEAAASYV--LLYNIYNDAGIQMPAT--EIRNLMKDRGVKKEPGLSWIEVGN 677
Query: 397 EVHGFI 402
VH F+
Sbjct: 678 VVHSFV 683
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 191/663 (28%), Positives = 339/663 (51%), Gaps = 33/663 (4%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ L S I E + ++L+T + ++ + NLD A + E +
Sbjct: 38 IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN +L + G P LE + M GV + T+ ++ + + ++ + ++HG
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K GF N L ++L+ Y KC + + ++F+ + +++ +SWN ++ Y++ G +E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +ML + P T + + C+ L G ++H I+ +L L +
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVD 277
Query: 288 MYVKCGRLEDARGLLDQPDER--NIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY KCG++++A GLL + DE +++ WT++VSGY S +I +AR+LF++M ER+++SW
Sbjct: 278 MYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWT 337
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M++GY + + E+L+ MR D+V L +L+ C L + +G+ VH FI
Sbjct: 338 TMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTY 397
Query: 406 DYSSNIFVSNALLDMYRKCGNL------------RSARIW------------------FY 435
+ F+ NALLD+Y KCG L +SA W F+
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFF 457
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+D VSWN ++ Y + E+ F +MQ +P K T +LL++CA + +L
Sbjct: 458 NKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALN 517
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G ++ ++ +N I+ + AL+++Y KC C+E A +F + +V + +M+ +
Sbjct: 518 HGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYA 577
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ EA++++ M++ G+KPDH+TF +L AC H G V ++F+ +R Y IIP +
Sbjct: 578 MEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTI 637
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
HY CM+ L R G+++E F+ RMP P V + + CR + L E A ++L E
Sbjct: 638 HHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697
Query: 675 LNP 677
++P
Sbjct: 698 IDP 700
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 210/477 (44%), Gaps = 53/477 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L + Y K +D AR LFD+M ER SW M+ Y Q G+ +LELF M
Sbjct: 302 VVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRF 361
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
V +++ VL + + + + +H IV G + L ++L+D Y KC + +
Sbjct: 362 ENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDE 421
Query: 197 A-------------------------------RRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
A R F+ I K+ VSWN +V Y+
Sbjct: 422 ALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLF 481
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS- 284
E+ +F KM +++P T + L +C+ + + G+ ++ I K + G D +LG+
Sbjct: 482 NESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEI-GIDAMLGTA 540
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV--- 341
L +MY KCG +E A + Q E+N+ WT++++ YA+ G+ EA +L+ EM ER V
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPD 600
Query: 342 -ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT-LGLILNVCAGLSEIKMGKEVH 399
+++ A+LA + L E + +R I + G ++++ L + +E
Sbjct: 601 HVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDL---LGRVGHLEETV 657
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRG 457
FI R ++ + ++L+ R N+ A F Q+ + + VL YA G
Sbjct: 658 KFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAG 717
Query: 458 QSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+ ++ +++ P + F + +EQ +H FV N +++C
Sbjct: 718 RWDDVSKVRTKLHETGVPKQPGF----------TMIEQNGVVHEFVASNLVSADILC 764
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/642 (30%), Positives = 331/642 (51%), Gaps = 37/642 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+ + ++ CA +K + + +L S ++ +F+ I + KCG +DDA
Sbjct: 202 KPDKYT-FVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDAL 260
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F+ +P RD +W +M+ ++ + LF M GV +++ + ++L++
Sbjct: 261 KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPE 320
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L K++H + + G + + ++L+ Y KC M DA +F+ ++ +N VSW ++
Sbjct: 321 ALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIA 380
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G +EA + F KM+ I P TF + L ACS S+ +G QIH IIK +
Sbjct: 381 GFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT 440
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
DD V +L MY KC G + +AR +F +
Sbjct: 441 DDRVRTALLSMYAKC-------------------------------GSLMDARNVFERIS 469
Query: 338 ERNVISWNAMLAGYTRSLLWKEAL-DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++NV++WNAM+ Y + + A+ F L+++ K D T ILNVC +++GK
Sbjct: 470 KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSSTFTSILNVCKSPDALELGK 528
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
V I R + S++ + NAL+ M+ CG+L SA F M +R D VSWN ++ G+ +
Sbjct: 529 WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQH 587
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G+++ A F MQ +P + TF LL ACA+ +L +G+++H + + +VV
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
L+ +YTKC ++ A VF +V SMI G+ + RG+EALE+F M++EG+K
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD ITF G L AC H G +K L F+SM+ + I P++EHY CM+ L+ R G + E +
Sbjct: 708 PDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVE 766
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F+N+M P + + C+ + L E A++ EL+P
Sbjct: 767 FINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDP 808
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 298/584 (51%), Gaps = 37/584 (6%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLE 65
A N LSK+ L S H++ + Y+ L QLC K + + ++
Sbjct: 72 ANAFLNRLSKAGQLSEAMLVLLSVDSPHIQ----IHRQTYSSLLQLCIKHKNLGDGERIH 127
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
+++ P +F+ N I Y KCGN + A+ +FDEMP++D SWN +LG Y Q+
Sbjct: 128 NHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYE 187
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
L M GV ++ T+ +L + A+ + +L LI+ G+ ++ + ++L+
Sbjct: 188 EAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALI 247
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
+ + KC + DA ++F+++ ++ ++W ++ K+A +F M E ++P
Sbjct: 248 NMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKV 307
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
F + L AC+ + +G ++H + ++ + + V +L MY KCG +EDA + +
Sbjct: 308 AFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLV 367
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN++SWT++++G+A GR+ EA FN+M E +
Sbjct: 368 KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI------------------------ 403
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ ++VT IL C+ S +K G+++H I + Y ++ V ALL MY KCG
Sbjct: 404 -------EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCG 456
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+L AR F ++S +++ V+WNA++T Y + + + A+ +F + E +P TF ++L
Sbjct: 457 SLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
C + +LE GK + +IR +E ++ R ALV ++ C L A+ +F + D++
Sbjct: 516 NVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLV 575
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N++I GF + + A + F +M++ G+KPD ITF G+L AC
Sbjct: 576 SWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNAC 619
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 265/531 (49%), Gaps = 34/531 (6%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA L ++ G + + L ++ + ++ TY+++L+ + LG +++H I
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
++ + + L+ Y KC A+++FD++ +K+ SWN+++ Y+ +EA +
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+M+++ ++P +TF L AC+ + +G ++ +I+ ++ D V +L M++K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG ++DA + + R++I+WTS+++G A + ++A LF M E V
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV---------- 302
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
D+V +L C ++ GK VH + + I
Sbjct: 303 ---------------------QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEI 341
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-Q 470
+V ALL MY KCG++ A + + + + R+ VSW A++ G+A+ G+ EEA F++M +
Sbjct: 342 YVGTALLSMYTKCGSMEDA-LEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
P++ TF ++L AC+ S+L+QG+QIH +I+ Y + R AL+ +Y KC L
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A VF+ S +V+ N+MI + +E+ A+ F + KEGIKPD TF IL C
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++L ++ S+ + G L ++ ++ G + + N MP
Sbjct: 521 PDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 198/441 (44%), Gaps = 36/441 (8%)
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F DI KN N + R AG EA+++ + I+ T+++ L C +
Sbjct: 63 FVDI--KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNL 120
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G +IH I + D + L MY KCG A+ + D+ ++++ SW ++ GY
Sbjct: 121 GDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGY 180
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
R EA L +M + V D+ T
Sbjct: 181 VQHRRYEEAFRLHEQMVQDGVKP-------------------------------DKYTFV 209
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+LN CA + G E+ I + +++FV AL++M+ KCG + A F + R
Sbjct: 210 YMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLP-R 268
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
RD ++W +++TG AR Q ++A F M+ E +P K F +LL AC + +LEQGK++
Sbjct: 269 RDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRV 328
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H + + + AL+ +YTKC +E A+ VF +V+ +MI GF + R
Sbjct: 329 HARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRM 388
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EA F M + GI+P+ +TF IL AC +K Q D + K G I
Sbjct: 389 EEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRI-IKAGYITDDRVRTA 447
Query: 620 MIKLYCRYGYMKELEDFVNRM 640
++ +Y + G + + + R+
Sbjct: 448 LLSMYAKCGSLMDARNVFERI 468
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 161/352 (45%), Gaps = 14/352 (3%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T LK S + + +C S A+ + ++S ++ + + N + +
Sbjct: 495 TFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFV 554
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
CG+L A LF++MPERD SWN ++ + Q+G + F M SGV +QIT+
Sbjct: 555 NCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTG 614
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L + A L ++LH LI + +V++ + L+ Y KC + DA +F ++ KN
Sbjct: 615 LLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKN 674
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
SW ++ Y G GKEA+ +F +M +E ++P TF AL AC+ EG+
Sbjct: 675 VYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFE 734
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNIISWTSIVSGYAISG 324
+ + E G + +++ + G L +A ++ +PD R W +++ +
Sbjct: 735 SMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSR---LWGALLGACQVHL 791
Query: 325 RIREARELFN---EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+ A ++ E+ + + + Y + +WKE V MRK D
Sbjct: 792 DVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKE----VTKMRKVMLD 839
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 342/659 (51%), Gaps = 38/659 (5%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
KS E + + A + + C + + +L +V V++ I+ Y K GN++
Sbjct: 122 KSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIE 181
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--S 152
+AR +FD++ E+ +W ++ YT+ G +LELF M + V ++ ++VL S
Sbjct: 182 EARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACS 241
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
E LE G KQ+H +++RG +V + + L+D Y KC + R++FD + KN +SW
Sbjct: 242 MLEFLEGG--KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISW 299
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y+ EA+ +F +M R +P F + L +C + +G Q+H IK
Sbjct: 300 TTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIK 359
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ E D+ V L +MY K L DA+ + D E+N+IS+ +++ GY+ ++ EA EL
Sbjct: 360 ANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALEL 419
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+EM R L L FV L L V A L +
Sbjct: 420 FHEMRVR---------------LFPPSLLTFVSL----------------LGVSASLFAL 448
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
++ K++HG I + S ++F +AL+D+Y KC ++ AR F +M++ +D V WNA+ G
Sbjct: 449 ELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFG 507
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y + ++EEA+ +S +Q+ +P++FTF L+ A +N++SL G+Q H +++ +
Sbjct: 508 YTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 567
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
ALV++Y KC +E A ++F S DV+ NSMI + EAL +F M K
Sbjct: 568 PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 627
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
EGI+P+++TF +L AC H G V+ L F+SM +GI P EHY C++ L R G +
Sbjct: 628 EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLF 686
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
E ++F+ +MP P + R + CR G LG++AA +P + + +N F
Sbjct: 687 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIF 745
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/596 (28%), Positives = 300/596 (50%), Gaps = 35/596 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A+L QL S I+ + + ++ FL N I K +D+AR +FD+MP
Sbjct: 30 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 89
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSK 163
++ +W++M+ Y+Q G+ L +F+D+ SG N+ A+V+R+ + +
Sbjct: 90 HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGA 149
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
QLHG +V+ GF +V + +SL+D Y K + +AR +FD + K AV+W I+ Y G
Sbjct: 150 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG 209
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
++ +F +M ++ P + ++ L ACS L G QIH +++ E D V+
Sbjct: 210 RSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN 269
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L + Y KC R++ R L DQ +NIISWT+++SGY + EA +LF EM N +
Sbjct: 270 VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM---NRLG 326
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W D +L C ++ G++VH +
Sbjct: 327 WKP----------------------------DGFACTSVLTSCGSREALEQGRQVHAYTI 358
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + S+ FV N L+DMY K L A+ F M++ ++ +S+NA++ GY+ + + EA+
Sbjct: 359 KANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAE-QNVISYNAMIEGYSSQEKLSEAL 417
Query: 464 TSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM+ PS TF +LL A++ +LE KQIH +I+ +++ AL++VY
Sbjct: 418 ELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVY 477
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC ++ A VF+E + D+++ N+M G+ + EAL+++ ++ KP+ TF
Sbjct: 478 SKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFA 537
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
++ A + +++ QF + + K G+ ++ +Y + G ++E N
Sbjct: 538 ALITAASNLASLRHGQQFHNQL-VKMGLDFCPFVTNALVDMYAKCGSIEEARKMFN 592
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 2/160 (1%)
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
RP + F LL + + + K IH +I + + + L+ V +K ++ A
Sbjct: 24 RPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 83
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEG 592
VF + ++I +SM+ + EAL VF L +K G P+ ++ AC G
Sbjct: 84 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 143
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
V+ Q + G + +I Y + G ++E
Sbjct: 144 VVEKGAQ-LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 182
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 215/730 (29%), Positives = 366/730 (50%), Gaps = 67/730 (9%)
Query: 21 TPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
+P KTL + ++ P ++H+FQ C+ KA+ ++ + ++ P VF+
Sbjct: 22 SPFKTLPISPFSSYQA-TPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVT 80
Query: 81 NRAIECYGKC-------------------------------GNLDDARGLFDEMPERDGG 109
N I+ Y KC G++ A+ LFD MPERD
Sbjct: 81 NCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVV 140
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
SWN+++ Y NG + +++FL M G ++ T+A VL+S + + G Q+HGL
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK GF +V+ S+L+D Y KC + + + F + KN VSW+ I+ + + + +
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT-EM 288
+F +M + + TFA+ +C+ LS+ G Q+HG +K DF G DVV+G+ T +M
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDF-GTDVVIGTATLDM 319
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYA------------ISGRIREARELFNEM 336
Y+KC L DA+ L + N+ S+ +I+ GYA +SG R + ++
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDL 379
Query: 337 P-------------ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ N+ NA+L Y + EA L+ + D V+ I+
Sbjct: 380 EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC----LVFEEMVSRDAVSWNAII 435
Query: 384 NVCA--GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
G E + +H I ++ + FV AL+DMY KCG + A +++++
Sbjct: 436 AAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 495
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
VSWNA+++G++ + QSEEA +FS+M + P FT+ T+L CAN+ ++E GKQIH
Sbjct: 496 -VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIH 554
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+I+ + + LV++Y+KC ++ +F+++ + D + N+M+ G+ + G
Sbjct: 555 AQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGE 614
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EAL++F M+ E +KP+H TF +L AC H G V+ L +F SM YG+ PQLEHY C+
Sbjct: 615 EALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCV 674
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ + R G + + + + MPF + R + C+ +G + E AA + +L P
Sbjct: 675 VDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDS 734
Query: 681 FQFKITTNRF 690
+ + +N +
Sbjct: 735 AAYVLLSNIY 744
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 207/478 (43%), Gaps = 76/478 (15%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+ P +TL + ++ + T++++ + ++ L KQ H ++ F V
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV------------------------- 214
+ + L+ Y KC + A ++FD + ++ VSWN
Sbjct: 79 VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138
Query: 215 ------IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
++ YL G+ ++ + +F +M R TFA L +CS L G+QIHG
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+ +K+ F+ D V +L +MY KC +L+ + E+N +SW++I++G + +R
Sbjct: 199 LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
ELF EM + V + Q T + CAG
Sbjct: 259 GLELFKEMQKAGV-------------------------------GVSQSTFASVFRSCAG 287
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
LS +++G ++HG + D+ +++ + A LDMY KC NL A+ F + + S+NA
Sbjct: 288 LSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ-SYNA 346
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++ GYAR + + + ACA I +G Q+H +++
Sbjct: 347 IIVGYARSDKG-------------LGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLC 393
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ N+ A++++Y KC L A VF+E S D + N++I N + L +F
Sbjct: 394 QSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 451
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 285/509 (55%), Gaps = 3/509 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ A ++ D R+F + ++AVS+N ++ + G+ +V ++ +L
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 237 RED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
RE+ +RP T + + S LS G +H ++++ F V L +MY K G +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
DAR + + + + ++ + ++++G I +A+ LF M +R+ I+W M+ G T++
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L EALD MR IDQ T G IL C L+ ++ GK++H +I R Y N+FV +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KC ++R A F +M+ R + +SW A++ GY + SEEA+ +FSEMQ + +
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P FT +++++CAN++SLE+G Q HC + + + ALV +Y KC +E A R+
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E S D + +++ G+ + +E +++F M G+KPD +TF G+L AC G V
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ +FDSM+ +GI+P +HY CMI LY R G KE E+F+ +MP +P +
Sbjct: 497 EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR G +G+WAA L E +P P +
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPASY 585
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 98/494 (19%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP----------------------- 104
L TF PP FLLN + Y K G L AR +FDEMP
Sbjct: 39 LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDM 98
Query: 105 --------ERDGGSWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAE 155
ERD S+NA++ ++ G P R+++L+ + V +IT + ++ ++
Sbjct: 99 ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ---------- 205
+ + +H +++ GF + S LVD Y K ++ DARR+F +++
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 206 ---------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++++++W +V G EA+ +F +M E +
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLD 303
+TF + L AC L++ EG QIH I + +E D+V +GS L +MY KC + A +
Sbjct: 279 YTFGSILTACGALAALEEGKQIHAYITRTWYE-DNVFVGSALVDMYSKCRSIRLAEAVFR 337
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ RNIISWT+++ GY + EA F+EM +
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI---------------------- 375
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D TLG +++ CA L+ ++ G + H + I VSNAL+ +Y K
Sbjct: 376 ---------KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
CG++ A F +MS D+VSW A++TGYA+ G+++E + F +M +P TF
Sbjct: 427 CGSIEDAHRLFDEMS-FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIG 485
Query: 483 LLAACANISSLEQG 496
+L+AC+ +E+G
Sbjct: 486 VLSACSRAGLVEKG 499
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 213/434 (49%), Gaps = 40/434 (9%)
Query: 266 IHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H +I+K + +L L Y K GRL AR + D+ + N+ + +++S A S
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLIL 383
+ + LF MPER+ +S+NA++ G++ + ++ + L+R+ + ++TL ++
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--- 440
V + LS+ +G VH + R + + FV + L+DMY K G +R AR F +M +
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 441 ---------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
RD ++W ++TG + G EA+ F M+ E
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
++TF ++L AC +++LE+GKQIH ++ R YE NV ALV++Y+KC + A
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
VF+ + ++I +MI+G+ N EA+ F M+ +GIKPD T ++ +C +
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
+++ QF + G++ + ++ LY + G +++ + M F+ V +
Sbjct: 394 SLEEGAQFH-CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452
Query: 653 FDKCRKNGYATLGE 666
GYA G+
Sbjct: 453 ------TGYAQFGK 460
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 213/476 (44%), Gaps = 65/476 (13%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIV-------- 59
+ + +L + S +PT + SD + +S++ + +L + A V
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 60 -------EARK----LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+AR+ +E+ V Y T LL +C ++DA+GLF M +RD
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLL--------RCKMIEDAKGLFQLMVDRDS 243
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+W M+ TQNG L++F M GV +Q T+ ++L + L KQ+H
Sbjct: 244 ITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAY 303
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
I + + NV + S+LVD Y KC + A +F + +N +SW ++ Y +EA
Sbjct: 304 ITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEA 363
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
V F +M + I+P +FT + + +C+ L+S EG Q H + + V +L +
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTL 423
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISW 344
Y KCG +EDA L D+ + +SWT++V+GYA G+ +E +LF +M + +++
Sbjct: 424 YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+L+ +R+ L ++ D+ M+K HG +
Sbjct: 484 IGVLSACSRAGLVEKGCDYFDSMQKD----------------------------HGIVPI 515
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+D+ + ++D+Y + G + A + QM D W +L+ RG E
Sbjct: 516 DDHYT------CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 29/381 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + A+ E +++ + + + VF+ + ++ Y KC ++ A +F M
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ SW AM+ Y QN + F +M G+ + T +V+ S A L Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L + G + + ++LV YGKC + DA R+FD++ + VSW +V Y G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQIHGVIIKIDFEGD 278
KE + +F KML ++P TF L ACS ++ MQ I+ ID
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDH-- 518
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFN 334
+ ++Y + GR ++A + Q P + W +++S + G + + A E
Sbjct: 519 ---YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLL 575
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
E +N S+ + + + W E V +R+ +D + G S IK
Sbjct: 576 ETDPQNPASYVLLCSMHAAKGQWTE----VAHLRRGMRDRQ-------VKKEPGCSWIKY 624
Query: 395 GKEVHGFI---HRNDYSSNIF 412
+VH F + +SS I+
Sbjct: 625 KNKVHIFSADDQSHPFSSRIY 645
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 286/510 (56%), Gaps = 4/510 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ +++D +F + ++ VS+N ++ + G+ +AV ++ +L
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 237 RED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
+ D +RP T + + A S L G Q H I+++ F + V L +MY K
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+ DA+ D+ D +N++ + ++++G + EAR LF M +R+ I+W M+ G+T++
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L EAL+ MR IDQ T G IL C LS ++ GK++H +I R Y N+FV
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG 310
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-T 473
+AL+DMY KC +++ A F +M+ + + +SW A++ GY + G SEEA+ FSEMQ +
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P +T +++++CAN++SLE+G Q HC + + + ALV +Y KC +E A R
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F E S D + +++ G+ R +E +++F M +G+KPD +TF G+L AC G
Sbjct: 430 LFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF 489
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V+ +F SM+ +GI+P +HY CMI LY R G +KE E+F+ +MP +P +
Sbjct: 490 VEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR G +G+WAA L E++P P +
Sbjct: 550 SACRLRGDMEIGKWAAENLLEIDPQNPASY 579
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 242/525 (46%), Gaps = 100/525 (19%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+S S YA L A ++ V L T PP +LLN + YGK G AR
Sbjct: 4 PLS-SQYAALLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARR 62
Query: 99 LFDEMP-------------------------------ERDGGSWNAMLGAYTQNGFPGRT 127
+FD MP +RD S+NA++ ++ G +
Sbjct: 63 VFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQA 122
Query: 128 LELFLDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ ++L + S V ++IT + ++ +++ + + KQ H I++ GF N + S LV
Sbjct: 123 VRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLV 182
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAV-------------------------------SWNV 214
D Y K ++ DA+R FD++ +KN V +W
Sbjct: 183 DMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTT 242
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
+V + G EA+ +F +M + I +TF + L AC LS+ +G QIH II+
Sbjct: 243 MVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTR 302
Query: 275 FEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
++ D+V +GS L +MY KC ++ A + + +NIISWT+++ GY +G EA +F
Sbjct: 303 YD-DNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVF 361
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+EM + D D TLG +++ CA L+ ++
Sbjct: 362 SEMQRDGI-------------------------------DPDDYTLGSVISSCANLASLE 390
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G + H + I VSNAL+ +Y KCG++ A F +MS D+VSW A+++GY
Sbjct: 391 EGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS-FHDQVSWTALVSGY 449
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
A+ G+++E + F +M + +P TF +L+AC+ +E+G+
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR 494
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 226/464 (48%), Gaps = 52/464 (11%)
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDAR 299
RPL+ +A AL + + + P+ +H VI++ + +L L Y K GR AR
Sbjct: 3 RPLSSQYA-ALLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARAR 61
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D N+ ++ +++S A + + + LF M +R+++S+NA++AG++ +
Sbjct: 62 RVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQ 121
Query: 360 ALDFVFLMRKTTKDI--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
A+ + + + ++T+ ++ + L + +GK+ H I R + +N FV + L
Sbjct: 122 AVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPL 181
Query: 418 LDMYRK-------------------------------CGNLRSARIWFYQMSQRRDKVSW 446
+DMY K C + AR F M+ RD ++W
Sbjct: 182 VDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTD-RDSITW 240
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
++TG+ + G EA+ F M+++ ++TF ++L AC +S+LEQGKQIH ++IR
Sbjct: 241 TTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIR 300
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
Y+ NV ALV++Y+KC ++ A VF+ + ++I ++I+G+ N EA+ V
Sbjct: 301 TRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRV 360
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY----ECMI 621
F M+++GI PD T ++ +C + +++ QF C ++ L HY ++
Sbjct: 361 FSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQF----HC-LALVSGLMHYITVSNALV 415
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
LY + G +++ + M F+ V + +GYA G
Sbjct: 416 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALV------SGYAQFG 453
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 188/388 (48%), Gaps = 38/388 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I +C +++AR LF+ M +RD +W M+ +TQNG LE+F M
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRF 265
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G++ +Q T+ ++L + L KQ+H I++ + NV + S+LVD Y KC +
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKL 325
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + KN +SW ++ Y G +EAV +F +M R+ I P ++T + + +C+
Sbjct: 326 AETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCAN 385
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+S EG Q H + + V +L +Y KCG +EDA L D+ + +SWT++
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 445
Query: 317 VSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
VSGYA GR +E +LF +M + V +++ +L+ +R+ ++ + M+K
Sbjct: 446 VSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKD-- 503
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
HG + +D+ + ++D+Y + G L+ A
Sbjct: 504 --------------------------HGIVPIDDHYT------CMIDLYSRSGKLKEAEE 531
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ QM D + W +L+ RG E
Sbjct: 532 FIKQMPMHPDAIGWGTLLSACRLRGDME 559
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 158/339 (46%), Gaps = 19/339 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + A+ + +++ + ++ VF+ + ++ Y KC ++ A +F M
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW A++ Y QNG + +F +M G+ + T +V+ S A L Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQ 394
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L + G + + ++LV YGKC + DA R+FD++ + VSW +V Y G
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGR 454
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS---FLS---SPYEGMQIHGVIIKIDFEGD 278
KE + +F KML + ++P TF L ACS F+ S + MQ I+ ID
Sbjct: 455 AKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDH-- 512
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFN 334
+ ++Y + G+L++A + Q P + I W +++S + G + + A E
Sbjct: 513 ---YTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLL 569
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
E+ +N S+ + + + W E V +R+ +D
Sbjct: 570 EIDPQNPASYVLLCSMHAAKGQWNE----VAQLRRGMRD 604
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 319/608 (52%), Gaps = 33/608 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC +L+D+ +F E+P+++ SW+A + QN R L+LF +M G+ +Q
Sbjct: 199 VDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQ 258
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
TYA+V RS A + QLH +K F +VI+ ++ +D Y KC M+DA ++F
Sbjct: 259 STYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSL 318
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ + N S+N ++ Y G +A +F ++ + + + AL A + + EG
Sbjct: 319 LPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEG 378
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+HG+ IK + + V ++ +MY KCG L +A GL D+ + R+ +SW +I++
Sbjct: 379 LQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ- 437
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
NE + + + AML ++ + D+ T G +L
Sbjct: 438 ----------NESEGKTLSHFGAML--------------------RSKMEPDEFTYGSVL 467
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAG G EVHG I ++ +FV +AL+DMY KCG + A Y++ + +
Sbjct: 468 KACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL-EEQTM 526
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA+++G++ + +SE++ FS M + P FT+ T+L CAN++++ GKQIH
Sbjct: 527 VSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQ 586
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+I+ +V LV++Y+KC + ++ +F+++ D + N+MI GF ++ G EA
Sbjct: 587 MIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEA 646
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
LE+F M E IKP+H TF +L AC H GN K L +F M Y + PQLEHY CM+
Sbjct: 647 LELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVD 706
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
+ R G ++E + MPF + R + C+ G + E AA L +L+P
Sbjct: 707 ILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSA 766
Query: 683 FKITTNRF 690
+ + +N +
Sbjct: 767 YTLLSNIY 774
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 310/624 (49%), Gaps = 72/624 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++H+FQ C++ +A+ ++ ++++ TP VF+ N I+ Y KC L+ A +F+EMP
Sbjct: 27 FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMP 86
Query: 105 ERD-------------GG-------------------SWNAMLGAYTQNGFPGRTLELFL 132
+RD G SWN+++ Y QNG +++ +FL
Sbjct: 87 QRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFL 146
Query: 133 DMNHSGVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
M GV + T A L+ S E+ LG+ Q+HG+ V+ GF +V+ S+LVD Y K
Sbjct: 147 KMRDLGVMFDHTTLAVSLKICSLLEDQVLGI--QIHGIAVQMGFDYDVVTGSALVDMYAK 204
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + D+ +F ++ +KN +SW+ + + + +F +M R+ I T+A+
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT-EMYVKCGRLEDARGLLDQPDERN 309
+C+ LS+ G Q+H +K DF G DV++G+ T +MY KC + DA L + N
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDF-GSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ S+ +++ GYA + + +A +LF + ++K
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQ-------------------------------LQK 352
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ D+V+L L+ A + G ++HG +++ SSNI V+NA+LDMY KCG L
Sbjct: 353 NSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVE 412
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA 488
A F +M + RD VSWNA++T + + ++ F M + + P +FT+ ++L ACA
Sbjct: 413 ASGLFDEM-EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACA 471
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ G ++H +I++ + + ALV++Y+KC +E A ++ ++ N+
Sbjct: 472 GQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNA 531
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+I GF ++ ++ F M + G++PD+ T+ +L C + V L Q M K
Sbjct: 532 IISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQM-IKL 590
Query: 609 GIIPQLEHYECMIKLYCRYGYMKE 632
++ + ++ +Y + G M +
Sbjct: 591 ELLSDVYITSTLVDMYSKCGNMHD 614
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/533 (24%), Positives = 240/533 (45%), Gaps = 74/533 (13%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T++++ + + L K+ H ++ GF V + + L+ Y KC + A ++F+++
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 205 QNKNAVSWNVIV--------------------------------RRYLVAGNGKEAVVMF 232
++ VSWN +V YL G+ ++++ +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
KM + + T A +L CS L G+QIHG+ +++ F+ D V +L +MY KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
LED+ ++F+E+P++N ISW+A +AG
Sbjct: 206 NSLEDSL-------------------------------DVFSELPDKNWISWSAAIAGCV 234
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
++ L M++ + Q T + CAGLS ++G ++H + D+ S++
Sbjct: 235 QNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVI 294
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
V A LDMY KC N+ A F + + S+NA++ GYAR Q +A F ++Q
Sbjct: 295 VGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ-SYNAMIIGYARNEQGFQAFKLFLQLQ-- 351
Query: 473 TRPSKFTFETL-----LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
+ F+F+ + L+A A I +G Q+H I++ N+ A++++Y KC
Sbjct: 352 --KNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGA 409
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
L A +F E D + N++I NE + L FG M + ++PD T+ +L A
Sbjct: 410 LVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKA 469
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
C + ++ + K G+ ++ ++ +Y + G M+E E R+
Sbjct: 470 CAGQRAFSNGMEVHGRI-IKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL 521
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 150/274 (54%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ YGKCG L +A GLFDEM RD SWNA++ A QN G+TL F M S +
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ TY +VL++ A + ++HG I+K G + + S+LVD Y KC +M +A ++
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
++ + VSWN I+ + + +++ F ML + P NFT+A L C+ L++
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV 577
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G QIH +IK++ D + +L +MY KCG + D+ + + +R+ ++W +++ G+
Sbjct: 578 GLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGF 637
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
A G EA ELF M N+ +A R+
Sbjct: 638 AYHGLGEEALELFEHMLHENIKPNHATFVSVLRA 671
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 213/436 (48%), Gaps = 7/436 (1%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
TF++ CS + G + H +I F V L +MYVKC LE A + ++
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPER-NVISWNAMLAGYTRSLLWKEALDFV 364
+R+I+SW ++V G A +GR+ A+ +FN MP +V+SWN++++GY ++ ++++
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
MR D TL + L +C+ L + +G ++HG + + ++ +AL+DMY KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
+L + F ++ ++ +SW+A + G + Q + F EMQ + S+ T+ ++
Sbjct: 206 NSLEDSLDVFSELPD-KNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
+CA +S+ G Q+HC ++ + +V+ A +++Y KC + A ++F ++
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
N+MI+G+ NE+G +A ++F ++K D ++ G L A LQ
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH-G 383
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY-- 661
+ K + + ++ +Y + G + E + M V I C +N
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS-WNAIITACEQNESEG 442
Query: 662 ATLGEWAARRLNELNP 677
TL + A +++ P
Sbjct: 443 KTLSHFGAMLRSKMEP 458
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 190/398 (47%), Gaps = 21/398 (5%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSD-EPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
I++ + KTL+ L+S EP ++ Y + + CA +A ++ ++
Sbjct: 431 IITACEQNESEGKTLSH-FGAMLRSKMEPDEFT-YGSVLKACAGQRAFSNGMEVHGRIIK 488
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+F+ + ++ Y KCG +++A + + E+ SWNA++ ++ +
Sbjct: 489 SGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRF 548
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M GV + TYA VL + A +G+ KQ+H ++K +V + S+LVD Y K
Sbjct: 549 FSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSK 608
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C M D+ MF +++V+WN ++ + G G+EA+ +F ML E+I+P + TF +
Sbjct: 609 CGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSV 668
Query: 251 LFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDER 308
L ACS + + +G+ + I E + ++ + G++E+A R + D P E
Sbjct: 669 LRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEA 728
Query: 309 NIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+ I W +++S I G + + A L PE + ++ + Y + +W++ V
Sbjct: 729 DAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSS-AYTLLSNIYADAGMWQQ----V 783
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+R+T + + L G S I++ EVH F+
Sbjct: 784 SKIRQTMRSHN-------LKKEPGCSWIEVKDEVHTFL 814
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 285/509 (55%), Gaps = 3/509 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ A ++ D R+F + ++AVS+N ++ + G+ +V ++ +L
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 237 RED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
RE+ +RP T + + S LS G +H ++++ F V L +MY K G +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
DAR + + + + ++ + ++++G I +A+ LF M +R+ I+W M+ G T++
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L EALD MR IDQ T G IL C L+ ++ GK++H +I R Y N+FV +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KC ++R A F +M+ R + +SW A++ GY + SEEA+ +FSEMQ + +
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P FT +++++CAN++SLE+G Q HC + + + ALV +Y KC +E A R+
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E S D + +++ G+ + +E +++F M G+KPD +TF G+L AC G V
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ +FDSM+ +GI+P +HY CMI LY R G KE E+F+ +MP +P +
Sbjct: 497 EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR G +G+WAA L E +P P +
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPASY 585
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 98/494 (19%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP----------------------- 104
L TF PP FLLN + Y K G L AR +FDEMP
Sbjct: 39 LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDM 98
Query: 105 --------ERDGGSWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAE 155
ERD S+NA++ ++ G P R+++L+ + V +IT + ++ ++
Sbjct: 99 ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ---------- 205
+ + +H +++ GF + S LVD Y K ++ DARR+F +++
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 206 ---------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++++++W +V G EA+ +F +M E +
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLD 303
+TF + L AC L++ EG QIH I + +E D+V +GS L +MY KC + A +
Sbjct: 279 YTFGSILTACGALAALEEGKQIHAYITRTWYE-DNVFVGSALVDMYSKCRSIRLAEAVFR 337
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ RNIISWT+++ GY + EA F+EM +
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI---------------------- 375
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D TLG +++ CA L+ ++ G + H + I VSNAL+ +Y K
Sbjct: 376 ---------KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
CG++ A F +MS D+VSW A++TGYA+ G+++E + F +M +P TF
Sbjct: 427 CGSIEDAHRLFDEMS-FHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIG 485
Query: 483 LLAACANISSLEQG 496
+L+AC+ +E+G
Sbjct: 486 VLSACSRAGLVEKG 499
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 213/434 (49%), Gaps = 40/434 (9%)
Query: 266 IHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H +I+K + +L L Y K GRL AR + D+ + N+ + +++S A S
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLIL 383
+ + LF MPER+ +S+NA++ G++ + ++ + L+R+ + ++TL ++
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--- 440
V + LS+ +G VH + R + + FV + L+DMY K G +R AR F +M +
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 441 ---------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
RD ++W ++TG + G EA+ F M+ E
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
++TF ++L AC +++LE+GKQIH ++ R YE NV ALV++Y+KC + A
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
VF+ + ++I +MI+G+ N EA+ F M+ +GIKPD T ++ +C +
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
+++ QF + G++ + ++ LY + G +++ + M F+ V +
Sbjct: 394 SLEEGAQFH-CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452
Query: 653 FDKCRKNGYATLGE 666
GYA G+
Sbjct: 453 ------TGYAQFGK 460
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 213/476 (44%), Gaps = 65/476 (13%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIV-------- 59
+ + +L + S +PT + SD + +S++ + +L + A V
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 60 -------EARK----LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+AR+ +E+ V Y T LL +C ++DA+GLF M +RD
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLL--------RCKMIEDAKGLFQLMVDRDS 243
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+W M+ TQNG L++F M GV +Q T+ ++L + L KQ+H
Sbjct: 244 ITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAY 303
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
I + + NV + S+LVD Y KC + A +F + +N +SW ++ Y +EA
Sbjct: 304 ITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEA 363
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
V F +M + I+P +FT + + +C+ L+S EG Q H + + V +L +
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTL 423
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISW 344
Y KCG +EDA L D+ + +SWT++V+GYA G+ +E +LF +M + +++
Sbjct: 424 YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTF 483
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+L+ +R+ L ++ D+ M+K HG +
Sbjct: 484 IGVLSACSRAGLVEKGCDYFDSMQKD----------------------------HGIVPI 515
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+D+ + ++D+Y + G + A + QM D W +L+ RG E
Sbjct: 516 DDHYT------CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 29/381 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + A+ E +++ + + + VF+ + ++ Y KC ++ A +F M
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ SW AM+ Y QN + F +M G+ + T +V+ S A L Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L + G + + ++LV YGKC + DA R+FD++ + VSW +V Y G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQIHGVIIKIDFEGD 278
KE + +F KML ++P TF L ACS ++ MQ I+ ID
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDH-- 518
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFN 334
+ ++Y + GR ++A + Q P + W +++S + G + + A E
Sbjct: 519 ---YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLL 575
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
E +N S+ + + + W E V +R+ +D + G S IK
Sbjct: 576 ETDPQNPASYVLLCSMHAAKGQWTE----VAHLRRGMRDRQ-------VKKEPGCSWIKY 624
Query: 395 GKEVHGFI---HRNDYSSNIF 412
+VH F + +SS I+
Sbjct: 625 KNKVHIFSADDQSHPFSSRIY 645
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 205/724 (28%), Positives = 362/724 (50%), Gaps = 81/724 (11%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L Q C ++K++ A+ + + + F FL N I+ Y KC + A +FD++P +
Sbjct: 10 NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69
Query: 107 DGGSWNAMLGAY-------------------------------TQNGFPGRTLELF-LDM 134
+ S+NA+L A+ +NG+ + L+ + L M
Sbjct: 70 NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ V + IT+A V + ++ ++ HGL++K GF N+ + ++L+ Y KC +
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA R+F+ I N V++ ++ KE + +F MLR+ I + + + L C
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249
Query: 255 ----SF--------LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
SF LS+ +G QIH + +K FE D + SL +MY K G ++ A +
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309
Query: 303 DQPDERNIISWTSIVSGYA-----------------------------------ISGRIR 327
+ D+ +++SW ++SGY SG ++
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVK 369
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
R++F+ M ++ISWNA+L+GY +S EA++ M+ ++ D+ TL +IL+ CA
Sbjct: 370 VGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCA 429
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
L ++ GK+VH + + +++V+++L+++Y KCG + ++ F ++S+ D V WN
Sbjct: 430 ELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSEL-DVVCWN 488
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+++ G++ ++A+ F M Q+ PS+F+F T+ ++CA +SSL QG+QIH +I++
Sbjct: 489 SMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKD 548
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
Y NV +LVE+Y KC + A F +++ N MI G+ HN G EA+ ++
Sbjct: 549 GYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLY 608
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M G KPD ITF +L AC H V ++ F SM K+ ++P+L+HY C+I R
Sbjct: 609 KDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGR 668
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G E+E ++ MP+ + + CR + +L + AA L+ LNP + +
Sbjct: 669 VGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLL 728
Query: 687 TNRF 690
N +
Sbjct: 729 ANMY 732
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 249/511 (48%), Gaps = 57/511 (11%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S+ +A +F C K + R+ ++ +++ N + Y KCG +DA +F
Sbjct: 137 SHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVF 196
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+ + E + ++ M+G +Q LELF M G+ + ++ + +L A+ + G
Sbjct: 197 EGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFG 256
Query: 161 V------------SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
V KQ+H L VK GF ++ L +SL+D Y K M A +F+++ +
Sbjct: 257 VCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHS 316
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC-------------S 255
VSWN+++ Y + ++A+ F +M P + T+ N L AC
Sbjct: 317 VVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFD 376
Query: 256 FLSSP-----------YEGMQIHGVII----KIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+SSP Y HG + K+ F+ + +L + C L G
Sbjct: 377 CMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAEL----G 432
Query: 301 LLDQPDERNIISW-----------TSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
LL+ + + +S +S+++ Y+ G++ ++ +F+++ E +V+ WN+M+A
Sbjct: 433 LLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIA 492
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
G++ + L ++AL MR+ + + I + CA LS + G+++H I ++ Y
Sbjct: 493 GFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVD 552
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
N+FV ++L++MY KCG++ +AR +++ M ++ V+WN ++ GYA G EA++ + +M
Sbjct: 553 NVFVGSSLVEMYCKCGDVGAAR-YYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDM 611
Query: 470 -QWETRPSKFTFETLLAACANISSLEQGKQI 499
+P TF +L AC++ + +++G +I
Sbjct: 612 ISSGEKPDDITFVAVLTACSHSALVDEGVEI 642
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 209/445 (46%), Gaps = 25/445 (5%)
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+++ LN N L +C S IH I + D + L ++Y KC ++ A
Sbjct: 2 EVKSLNLI--NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSA 59
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ D+ +NI S+ +I+S + S ++ A LF +MPERN +S N ++ ++ +
Sbjct: 60 HHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYER 119
Query: 359 EALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+ALD + +M + +T + + C GL ++ G+ HG + + + SNI+VSNAL
Sbjct: 120 QALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNAL 179
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
L MY KCG L ++ ++V++ ++ G ++ Q +E + F M +
Sbjct: 180 LCMYTKCG-LNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVD 238
Query: 477 KFTFETLLAACAN------------ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ T+L CA +S+ QGKQIH +++ +E ++ +L+++Y K
Sbjct: 239 SVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAK 298
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
++ A VF+ V+ N MI G+ + +ALE F M+ G +PD +T+ +
Sbjct: 299 TGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINM 358
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF-- 642
L AC+ G+VK+ Q FD M P L + ++ Y + E + +M F
Sbjct: 359 LTACVKSGDVKVGRQIFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQW 413
Query: 643 -NPTVPMLRKIFDKCRKNGYATLGE 666
NP L I C + G G+
Sbjct: 414 QNPDRTTLAIILSSCAELGLLEAGK 438
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +S +A + CA ++ + +++ + ++ VF+ + +E Y KCG++ AR
Sbjct: 517 PSEFS-FATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARY 575
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE-- 156
FD MP ++ +WN M+ Y NG+ + L+ DM SG + IT+ VL + +
Sbjct: 576 YFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSAL 635
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVI 215
++ GV + ++ K + + ++D G+ + + D + K + + W V+
Sbjct: 636 VDEGV-EIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVV 694
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+ V N V K E++ LN
Sbjct: 695 LSSCRVHAN-----VSLAKRAAEELHRLN 718
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 205/659 (31%), Positives = 342/659 (51%), Gaps = 38/659 (5%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
KS E + + A + + C + + +L +V V++ I+ Y K GB++
Sbjct: 30 KSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIE 89
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--S 152
AR +FD++ E+ +W ++ YT+ G +LELF M + V ++ ++VL S
Sbjct: 90 VARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACS 149
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
E LE G KQ+H +++RG +V + + L+D Y KC + R++FD + KN +SW
Sbjct: 150 MLEFLEGG--KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISW 207
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y+ EA+ +F +M R +P F + L +C L + +G Q+H IK
Sbjct: 208 TTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIK 267
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ E ++ V L +MY K L DA+ + D E+N+IS+ +++ GY+ ++ EA EL
Sbjct: 268 ANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALEL 327
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+EM R L L FV L L V A L +
Sbjct: 328 FHEMRVR---------------LFPPSLLTFVSL----------------LGVSASLFAL 356
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
++ K++HG I + S ++F +AL+D+Y KC ++ AR F +M++ +D V WNA+ G
Sbjct: 357 ELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFG 415
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y + ++EEA+ +S +Q+ +P++FTF L+ A +N++SL G+Q H +++ +
Sbjct: 416 YTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 475
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
ALV++Y KC +E A ++F S DV+ NSMI + EAL +F M K
Sbjct: 476 PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 535
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
EGI+P+++TF +L AC H G V+ L F+SM +GI P EHY C++ L R G +
Sbjct: 536 EGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLF 594
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
E ++F+ +MP P + R + CR G LG++AA +P + + +N F
Sbjct: 595 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIF 653
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 137/241 (56%), Gaps = 8/241 (3%)
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
GY+ L + FV L RK+ + ++ L ++ C L ++ G ++HGF+ R+ +
Sbjct: 15 GYSEEAL----MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQ 70
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+++V +L+D Y K GB+ AR+ F Q+ ++ V+W ++ GY + G+S ++ F++M
Sbjct: 71 DVYVGTSLIDFYSKNGBIEVARLVFDQLLEKT-AVTWTTIIAGYTKCGRSXVSLELFAQM 129
Query: 470 QWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
+ ET P ++ ++L+AC+ + LE GKQIH +V+R E++V L++ YTKC
Sbjct: 130 R-ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 188
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ ++F + ++I +MI G+ N EA+++FG M + G KPD +L +
Sbjct: 189 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTS 248
Query: 588 C 588
C
Sbjct: 249 C 249
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 201/653 (30%), Positives = 335/653 (51%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y L + + C ++ + R + + +F+ N I Y +CG+ A
Sbjct: 141 PTPYVL-SSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAER 199
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F +MP RD ++N ++ + Q G LE+F +M SG+S + +T +++L + A +
Sbjct: 200 VFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L QLH + K G + I+E SL+D Y KC + A +F+ N V WN+++
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + ++ +F +M IRP FT+ L C+ G QIH + +K FE D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V G L +MY K G LE AR +L+ + E
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEM-------------------------------LKE 408
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW +M+AGY + K+AL M+K D + L ++ CAG++ ++ G ++
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQI 468
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I+ + YS ++ + NAL+++Y +CG +R A F +M + +D ++ N +++G+A+ G
Sbjct: 469 HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEM-ELKDGITGNGLVSGFAQSGL 527
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ F M Q + + FTF + L+A AN++ ++QGKQIH VI+ + A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC E A F E S + + N++I + RG EAL++F MKKEGIKP+
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPN 647
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF G+L AC H G V+ L +F SM +YGI P+ +HY C+I ++ R G + + F+
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFI 707
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP + R + C+ + +GE+AA+ L EL P + + +N +
Sbjct: 708 EEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 262/556 (47%), Gaps = 40/556 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F+E+ RD SW AML Y QNG L L+ M+ +GV
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++VL S + + +H K GFC + + ++++ Y +C A R+
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ +++ V++N ++ + G+G+ A+ +F +M + P T ++ L AC+ L
Sbjct: 201 FCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDL 260
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H + K D ++ GSL ++YVKCG +E A + + D N++ W ++ +
Sbjct: 261 QKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAF 320
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ ++ ELF +M + +Q T
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRP-------------------------------NQFTYP 349
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C EI +G+++H + + S+++VS L+DMY K G L AR +M +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR-RVLEMLKE 408
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
+D VSW +++ GY + ++A+ +F EMQ W P + ++ CA I+++ QG
Sbjct: 409 KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIW---PDNIGLASAISGCAGINAMRQG 465
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH + + Y +V ALV +Y +C + A F+E D I N ++ GF +
Sbjct: 466 LQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQS 525
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL+VF M + G+K + TF L A + +K Q + K G + E
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEV 584
Query: 617 YECMIKLYCRYGYMKE 632
+I LY + G ++
Sbjct: 585 GNALISLYGKCGSFED 600
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 247/533 (46%), Gaps = 37/533 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGV 161
M R S L + + P + L LF D + +A LR+ V
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++H V RG I+ + L+D Y K ++ ARR+F+++ ++ VSW ++ Y
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G G+EA+ ++ +M R + P + ++ L +C+ +G IH K F + V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
++ +Y++CG A R D P R+ +++ +++SG+A G A E+F EM
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMP-HRDTVTFNTLISGHAQCGHGEHALEIFEEM---- 235
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+G + D VT+ +L CA L +++ G ++H
Sbjct: 236 ------QFSGLSP---------------------DCVTISSLLAACASLGDLQKGTQLHS 268
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++ + SS+ + +LLD+Y KCG++ +A + F S R + V WN +L + +
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF-NSSDRTNVVLWNLMLVAFGQINDLA 327
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
++ F +MQ RP++FT+ +L C ++ G+QIH ++ +E ++ G L+
Sbjct: 328 KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLI 387
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y+K LE A RV + DV+ SMI G+ +E ++AL F M+K GI PD+I
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ C ++ LQ + G + + ++ LY R G ++E
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIRE 499
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 334/662 (50%), Gaps = 45/662 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P P V+ N AI + G+L AR L MP+R+ SWN ++ A ++G PG LE++
Sbjct: 72 PHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQ 131
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G++ T A+VL + L ++ HGL VK G G+ +E+ L+ Y KC
Sbjct: 132 GMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCG 191
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA R+FD + + N VS+ ++ G +A+ +F +M R IR ++ L
Sbjct: 192 SVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLG 251
Query: 253 ACS-FLSSPYE-------GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
AC+ + Y IH ++++ F D V SL ++Y K ++++A + +
Sbjct: 252 ACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 311
Query: 305 PDERNIISWTSIVSGYAISG-----------------------------------RIREA 329
+I+SW +++GY G + A
Sbjct: 312 LSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSA 371
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R +F+++P+ +V +WN +L+GY + L +E +D M+ D+ TL +IL+ C+ L
Sbjct: 372 RAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRL 431
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++GK+VH R +++FV++ L+D+Y KCG + A I F M++R D V WN++
Sbjct: 432 GNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER-DVVCWNSM 490
Query: 450 LTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++G A SEEA +M+ P++ ++ +++ CA +SS+ QG+Q+H V+++ Y
Sbjct: 491 ISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGY 550
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ NV +L+++Y K ++ A F +++ N MI G+ N G +A+E+F
Sbjct: 551 DQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEY 610
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M KPD +TF +L C H G V A+ FF+SM YGI P +EHY C+I R
Sbjct: 611 MLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAA 670
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
E+E + +MP+ + + C + A LGE++A+ L L+P P + + +N
Sbjct: 671 RFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSN 730
Query: 689 RF 690
+
Sbjct: 731 IY 732
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 239/499 (47%), Gaps = 54/499 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +++L A + C + A+ + R+ V F+ N + Y KCG++ DA
Sbjct: 140 PTNFTL-ASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVR 198
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD MP + S+ AM+G Q G L LF M+ +G+ + + ++VL + A+
Sbjct: 199 LFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACA 258
Query: 159 --------LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ +++ +H L+V++GF + + +SLVD Y K M M +A ++F+ + + + V
Sbjct: 259 GDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIV 318
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC---------------- 254
SWN+++ Y G + A+ + M P T++N L +C
Sbjct: 319 SWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 378
Query: 255 --------SFLSSPYEGMQIHGVIIKI-------DFEGDDVVLGSLTEMYVKCGRLE--- 296
+ L S Y ++H I + + + D L + + G E
Sbjct: 379 PKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGK 438
Query: 297 -----DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
R LL ++ + ++ Y+ G++ A +FN M ER+V+ WN+M++G
Sbjct: 439 QVHSASVRLLL----HNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGL 494
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
L +EA DF+ MR+ + + ++N+CA LS I G+++H + ++ Y N+
Sbjct: 495 AIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNV 554
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-Q 470
+V +L+DMY K GN+ AR++F M ++ V+WN ++ GYA+ G E+A+ F M
Sbjct: 555 YVGCSLIDMYAKSGNMDDARLFFNCMIV-KNLVAWNEMIHGYAQNGFGEKAVELFEYMLT 613
Query: 471 WETRPSKFTFETLLAACAN 489
+ +P TF +L C++
Sbjct: 614 TKQKPDSVTFIAVLTGCSH 632
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 191/416 (45%), Gaps = 26/416 (6%)
Query: 267 HGVIIKIDFEGDDVVLGSLTEMY----VKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
H ++ D +L L E+Y + C L R L N+ S+ + +S
Sbjct: 33 HARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRAL----PHPNVYSYNAAISAACR 88
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G + AR+L MP+RN +SWN ++A RS EAL+ M + TL +
Sbjct: 89 AGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASV 148
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C ++ + G+ HG + + FV N LL MY KCG++ A F M +
Sbjct: 149 LSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSP-N 207
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA-------NIS-SL 493
+VS+ A++ G A+ G ++A+ F+ M + R ++L ACA N++ ++
Sbjct: 208 EVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAI 267
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ + IH V+R + + +LV++Y K ++ AI+VF+ SS+ ++ N +I G+
Sbjct: 268 QLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGY 327
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
A+EV M++ G +P+ +T+ +L +CI +V A FD + P
Sbjct: 328 GQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIP-----KPS 382
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP---MLRKIFDKCRKNGYATLGE 666
+ + ++ Y + +E D RM P L I C + G LG+
Sbjct: 383 VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGK 438
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 191/491 (38%), Gaps = 107/491 (21%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+ RS + +K H ++ G + L + LV+ Y + A R F + + N
Sbjct: 16 IKRSGGRKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPN 75
Query: 209 AVS-------------------------------WNVIVRRYLVAGNGKEAVVMFFKMLR 237
S WN ++ +G+ EA+ M+ ML+
Sbjct: 76 VYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQ 135
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
E + P NFT A+ L AC +++ +G + HG+ +K+ +G V L MY KCG + D
Sbjct: 136 EGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVAD 195
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
A L D N +S+T+++ G A G + +A LF
Sbjct: 196 AVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFAR---------------------- 233
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAG--------LSEIKMGKEVHGFIHRNDYSS 409
M +T +D V + +L CA I++ + +H + R + S
Sbjct: 234 ---------MSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGS 284
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ V N+L+D+Y K + A F +S VSWN ++TGY + G E AM M
Sbjct: 285 DQHVGNSLVDLYAKGMKMDEAIKVFESLSS-VSIVSWNILITGYGQLGCYERAMEVLEFM 343
Query: 470 QWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
Q P++ T+ +LA+C + + +
Sbjct: 344 QESGFEPNEVTYSNMLASCIKARDVPSARAM----------------------------- 374
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
F + V N+++ G+ E +E +++F M+ + ++PD T IL +C
Sbjct: 375 ------FDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSC 428
Query: 589 IHEGNVKLALQ 599
GN +L Q
Sbjct: 429 SRLGNFELGKQ 439
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/510 (33%), Positives = 282/510 (55%), Gaps = 4/510 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ ++ D +F + ++ VS+N ++ + G AV ++ +L
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 237 R--EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
R +RP T + + A S L G Q H I+++ F + V L MY K G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+ DA+ + D+ D +N++ + ++++G + EAR LF M +R+ I+W M+ G+T++
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L +AL+F MR IDQ T G IL C LS ++ GK++H +I R Y N+FV
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-T 473
+AL+DMY KC +++ A F +MS + + +SW A++ GY + G SEEA+ FSEMQ +
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P FT +++++CAN++SLE+G Q HC + + + ALV +Y KC +E A R
Sbjct: 370 DPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F E D + +++ G+ R +E +++F M + +KPD +TF G+L AC G
Sbjct: 430 LFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGF 489
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V+ +F SM+ +GI+P +HY CMI LY R G +KE E+F+ +MP +P +
Sbjct: 490 VEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR G +G+WAA L E++P P +
Sbjct: 550 SACRLRGDMEIGQWAAENLLEIDPQNPASY 579
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/528 (27%), Positives = 249/528 (47%), Gaps = 91/528 (17%)
Query: 4 NAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARK 63
+AA L ++ ++ P P P+ L ++ + K+ A ++ + +A
Sbjct: 22 HAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRH-------------ARARRVFDAT- 67
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
P P +F N + LDD LF M +RD S+NA++ ++ G
Sbjct: 68 ---------PHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGA 118
Query: 124 PGRTLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
R + L+ + +G V ++IT + ++ +++ + + +Q H I++ GF N +
Sbjct: 119 HARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVG 178
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV------------RRY---------- 219
S LV Y K ++ DA+R+FD++ KN V +N ++ RR
Sbjct: 179 SPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCI 238
Query: 220 ----LVAG---NGKEAVVM-FFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+V G NG E+ + FF+ +R + I +TF + L AC LS+ +G QIH I
Sbjct: 239 TWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI 298
Query: 271 IKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I+ ++ D+V +GS L +MY KC ++ A + +NIISWT+++ GY +G EA
Sbjct: 299 IRTHYD-DNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEA 357
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+F+EM + D D TLG +++ CA L
Sbjct: 358 VRVFSEMQRDGI-------------------------------DPDDFTLGSVISSCANL 386
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ ++ G + H + I VSNAL+ +Y KCG++ A F +M D+VSW A+
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-LFHDQVSWTAL 445
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+TGYA+ G+++E + F +M + +P TF +L+AC+ +E+G
Sbjct: 446 VTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKG 493
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 187/388 (48%), Gaps = 38/388 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I +C +++AR LF+ M +RD +W M+ +TQNG + L F M
Sbjct: 206 VVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRF 265
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G++ +Q T+ ++L + L KQ+H I++ + NV + S+LVD Y KC +
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A F + KN +SW ++ Y G +EAV +F +M R+ I P +FT + + +C+
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+S EG Q H + + V +L +Y KCG +EDA L D+ + +SWT++
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTAL 445
Query: 317 VSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
V+GYA GR +E +LF +M ++V +++ +L+ +R+ ++ + M+K
Sbjct: 446 VTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKD-- 503
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
HG + +D+ + ++D+Y + G L+ A
Sbjct: 504 --------------------------HGIVPIDDHYT------CMIDLYSRSGRLKEAEE 531
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ QM D + W +L+ RG E
Sbjct: 532 FIKQMPMHPDAIGWGTLLSACRLRGDME 559
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 221/463 (47%), Gaps = 50/463 (10%)
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDAR 299
RPL+ +A AL + + + P+ +H VI++ + +L L Y K GR AR
Sbjct: 3 RPLSSQYA-ALLSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARAR 61
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D N+ ++ +++S A + + + LF M +R+ +S+NA++AG++
Sbjct: 62 RVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHAR 121
Query: 360 ALDFVFLMRKTTKDI--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
A+ + + + ++T+ ++ + L + +G++ H I R + N FV + L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181
Query: 418 LDMYRKCGNLRSARIWFYQMSQR------------------------------RDKVSWN 447
+ MY K G + A+ F +M + RD ++W
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWT 241
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++TG+ + G +A+ F M+++ ++TF ++L AC +S+LEQGKQIH ++IR
Sbjct: 242 TMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT 301
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
Y+ NV ALV++Y+KC ++ A F+ S ++I ++I+G+ N EA+ VF
Sbjct: 302 HYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVF 361
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY----ECMIK 622
M+++GI PD T ++ +C + +++ QF C ++ L HY ++
Sbjct: 362 SEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF----HC-LALVSGLMHYITVSNALVT 416
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
LY + G +++ + M F+ V + GYA G
Sbjct: 417 LYGKCGSIEDAHRLFDEMLFHDQVSWTALV------TGYAQFG 453
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 19/339 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + A+ + +++ + ++ + VF+ + ++ Y KC ++ A F M
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS 334
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW A++ Y QNG + +F +M G+ + T +V+ S A L Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ 394
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L + G + + ++LV YGKC + DA R+FD++ + VSW +V Y G
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGR 454
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS---FLS---SPYEGMQIHGVIIKIDFEGD 278
KE + +F KML +D++P TF L ACS F+ S + MQ I+ ID
Sbjct: 455 AKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDH-- 512
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFN 334
+ ++Y + GRL++A + Q P + I W +++S + G + + A E
Sbjct: 513 ---YTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLL 569
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
E+ +N S+ + + + W + V +R+ +D
Sbjct: 570 EIDPQNPASYVLLCSMHATKGNWNQ----VAQLRRGMRD 604
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/648 (30%), Positives = 329/648 (50%), Gaps = 35/648 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A+L QL S I+ + + ++ FL N I K +D+AR +FD+MP
Sbjct: 52 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 111
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSK 163
++ +W++M+ Y+Q G+ L +F+D+ SG N+ A+V+R+ + +
Sbjct: 112 HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGA 171
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
QLHG +V+ GF +V + +SL+D Y K + +AR +FD + K AV+W I+ Y G
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG 231
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
++ +F +M ++ P + ++ L ACS L G QIH +++ E D V+
Sbjct: 232 RSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN 291
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L + Y KC R ++ R+LF++M +N+IS
Sbjct: 292 VLIDFYTKCNR-------------------------------VKAGRKLFDQMVVKNIIS 320
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W M++GY ++ EA+ M + D +L C ++ G++VH +
Sbjct: 321 WTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTI 380
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + S+ FV N L+DMY K L A+ F M+++ + +S+NA++ GY+ + + EA+
Sbjct: 381 KANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEAL 439
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM+ +P++FTF L+ A +N++SL G+Q H +++ + ALV++Y
Sbjct: 440 ELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMY 499
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC +E A ++F S DV+ NSMI + EAL +F M KEGI+P+++TF
Sbjct: 500 AKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFV 559
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V+ L F+SM +GI P EHY C++ L R G + E ++F+ +MP
Sbjct: 560 AVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPI 618
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + R + CR G LG++AA +P + + +N F
Sbjct: 619 EPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIF 666
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 236/465 (50%), Gaps = 37/465 (7%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
KS E + + A + + C + + +L +V V++ I+ Y K GN++
Sbjct: 144 KSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIE 203
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+AR +FD++ E+ +W ++ YT+ G +LELF M + V ++ ++VL + +
Sbjct: 204 EARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACS 263
Query: 155 --EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
E LE G KQ+H +++RG +V + + L+D Y KC + R++FD + KN +SW
Sbjct: 264 MLEFLEGG--KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISW 321
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y+ EA+ +F +M R +P F + L +C + +G Q+H IK
Sbjct: 322 TTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIK 381
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ E D+ V L +MY K L DA+ + D E+N+IS+ +++ GY+ ++ EA EL
Sbjct: 382 ANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALEL 441
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+E MR + ++ T ++ + L+ +
Sbjct: 442 FHE-------------------------------MRVRLQKPNEFTFAALITAASNLASL 470
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G++ H + + FV+NAL+DMY KCG++ AR F S RD V WN++++
Sbjct: 471 RHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF-NSSIWRDVVCWNSMIST 529
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+A+ G++EEA+ F EM E +P+ TF +L+AC++ +E G
Sbjct: 530 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG 574
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 2/160 (1%)
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
RP + F LL + + + K IH +I + + + L+ V +K ++ A
Sbjct: 46 RPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 105
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEG 592
VF + ++I +SM+ + EAL VF L +K G P+ ++ AC G
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
V+ Q + G + +I Y + G ++E
Sbjct: 166 VVEKGAQ-LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 204
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/716 (30%), Positives = 344/716 (48%), Gaps = 109/716 (15%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC-----YGKCG 91
D + +Y L Q C +A+ +++ + ++ F N +E Y KC
Sbjct: 1169 DFQIGPEIYGELLQGCVYERALHTGQQIHARILK---NGDFFAKNEYVETKLVVFYAKCD 1225
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+ A LF + R+ SW A++G + GF L F++M +GV + NVL+
Sbjct: 1226 FPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLK 1285
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ +G+ K +HG ++K GF V + SSLVD YGKC V+ DAR++FD + KN V+
Sbjct: 1286 ACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVT 1345
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y+ G +EA+ +F+ M E I P T A+ L A + L + EG Q H + I
Sbjct: 1346 WNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAI 1405
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
L+ D NI+ +SI++ Y+ G I +A
Sbjct: 1406 ------------------------------LNSLDLDNILG-SSIINFYSKVGLIEDAEL 1434
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F+ M E++V++WN +++ Y + +AL+ LMR D VTL IL+ A S
Sbjct: 1435 VFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSN 1494
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR------------IW------ 433
IK+GKE H + R + S++ V+N+++DMY KC + AR +W
Sbjct: 1495 IKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAA 1554
Query: 434 -------------FYQM---SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ------- 470
FYQM S + +SWN+V+ G+ R GQ EA FS+MQ
Sbjct: 1555 YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPN 1614
Query: 471 ---WET--------------------------RPSKFTFETLLAACANISSLEQGKQIHC 501
W T RPS + ++L AC +I SL G+ IH
Sbjct: 1615 LITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHG 1674
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
F+ R+ + ++V +LV++Y KC ++ A +VF SS ++ I N+MI + + + E
Sbjct: 1675 FITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVE 1734
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F ++KEGI+PD ITF IL AC H G V L F M K+ + P +EHY C++
Sbjct: 1735 ALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVV 1794
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G + E + MPF P +L + CR++ LGE+ ++ L +L P
Sbjct: 1795 SLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEP 1850
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 254/543 (46%), Gaps = 39/543 (7%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGN 177
++G ++ L +M Y +L+ E L +Q+H I+K G F N
Sbjct: 1151 KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKN 1210
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+E+ LV Y KC A R+F ++ +N SW IV G ++A++ F +M
Sbjct: 1211 EYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQE 1270
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+ P NF N L AC L G +HG ++K+ F V SL +MY KCG LED
Sbjct: 1271 NGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLED 1330
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR + D E+N+++W S++ GY +G L
Sbjct: 1331 ARKVFDSMVEKNVVTWNSMIVGYVQNG-------------------------------LN 1359
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+EA+D + MR + +VT+ L+ A L + GK+ H N + + +++
Sbjct: 1360 QEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSI 1419
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
++ Y K G + A + F +M + +D V+WN +++ Y + Q +A+ M+ E R
Sbjct: 1420 INFYSKVGLIEDAELVFSRMLE-KDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFD 1478
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T ++L+A A S+++ GK+ HC+ IR E +VV +++++Y KC ++ A +VF
Sbjct: 1479 SVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFD 1538
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
++ D+++ N+++ + EAL++F M+ + + P+ I+++ ++L + G V
Sbjct: 1539 STTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNE 1598
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP---FNPTVPMLRKIF 653
A F M+ G P L + +I + G+ E F +M P++ + +
Sbjct: 1599 AKDMFSQMQ-SLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVL 1657
Query: 654 DKC 656
C
Sbjct: 1658 LAC 1660
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 221/716 (30%), Positives = 344/716 (48%), Gaps = 109/716 (15%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC-----YGKCG 91
D + +Y L Q C +A+ +++ + ++ F N +E Y KC
Sbjct: 74 DFQIGPEIYGELLQGCVYERALHTGQQIHARILK---NGDFFAKNEYVETKLVVFYAKCD 130
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+ A LF + R+ SW A++G + GF L F++M +GV + NVL+
Sbjct: 131 FPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLK 190
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ +G+ K +HG ++K GF V + SSLVD YGKC V+ DAR++FD + KN V+
Sbjct: 191 ACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVT 250
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y+ G +EA+ +F+ M E I P T A+ L A + L + EG Q H + I
Sbjct: 251 WNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAI 310
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
L+ D NI+ +SI++ Y+ G I +A
Sbjct: 311 ------------------------------LNSLDLDNILG-SSIINFYSKVGLIEDAEL 339
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F+ M E++V++WN +++ Y + +AL+ LMR D VTL IL+ A S
Sbjct: 340 VFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSN 399
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR------------IW------ 433
IK+GKE H + R + S++ V+N+++DMY KC + AR +W
Sbjct: 400 IKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAA 459
Query: 434 -------------FYQM---SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ------- 470
FYQM S + +SWN+V+ G+ R GQ EA FS+MQ
Sbjct: 460 YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPN 519
Query: 471 ---WET--------------------------RPSKFTFETLLAACANISSLEQGKQIHC 501
W T RPS + ++L AC +I SL G+ IH
Sbjct: 520 LITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHG 579
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
F+ R+ + ++V +LV++Y KC ++ A +VF SS ++ I N+MI + + + E
Sbjct: 580 FITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVE 639
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F ++KEGI+PD ITF IL AC H G V L F M K+ + P +EHY C++
Sbjct: 640 ALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVV 699
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G + E + MPF P +L + CR++ LGE+ ++ L +L P
Sbjct: 700 SLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEP 755
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 324/607 (53%), Gaps = 34/607 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ + ++ + C ++ R + + VF+ + I+ Y + G + DAR
Sbjct: 145 PDKYT-FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARY 203
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD MP +DG WN ML Y +NG +F++M + + N +T+A VL A E+
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ QLHGL+V G + + ++L+ Y KC + DARR+FD + + V+WN ++
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISG 323
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G EA +F +M+ ++P + TF++ L S ++ +G +IH II+ D
Sbjct: 324 YVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLD 383
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L ++Y KC +E A + DQ +I+ T+++SGY ++G A E+F
Sbjct: 384 VFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIF----- 438
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R LL + MR + VTL +L CAGL+ + +GKE+
Sbjct: 439 --------------RWLLQER-------MRANS-----VTLASVLPACAGLAALTLGKEL 472
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG I +N + + +V +A++DMY KCG L A F +S + D V WN+++T ++ G+
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXK-DAVCWNSMITSCSQNGK 531
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ F +M T+ + L+ACAN+ +L GK+IH F++R + ++ A
Sbjct: 532 PEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESA 591
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y+KC L+ A RVF + + NS+I + ++ R +++L +F M +GI+PD
Sbjct: 592 LIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPD 651
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+TF I+ AC H G V + +F M + GI+ ++EHY CM+ L+ R G + E +
Sbjct: 652 HVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMI 711
Query: 638 NRMPFNP 644
N MPF+P
Sbjct: 712 NSMPFSP 718
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/590 (26%), Positives = 276/590 (46%), Gaps = 38/590 (6%)
Query: 4 NAATILKNILSKSSPK----PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIV 59
N ++I K L ++ K T S + K + + +D+ ++ L + + Q C +
Sbjct: 5 NLSSIYKCFLPSTTFKLKSFHTNSINIGKPLQFSIHNDDSLAPQLVS-ILQTCTDPSGLS 63
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
R+ + ++ L + + Y CG DA+ +F ++ WN M+ +T
Sbjct: 64 HGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFT 123
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G L + M G ++ T+ V+++ + + + +H I GF +V
Sbjct: 124 MMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVF 183
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ SSL+ Y + + DAR +FD + +K+ V WNV++ Y+ G+ A +F +M R +
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE 243
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
P + TFA L C+ G Q+HG+++ E D V +L MY KCG L DAR
Sbjct: 244 TNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDAR 303
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L D + ++++W ++SGY +G + EA LF+EM +
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGM------------------ 345
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
D +T L + + + ++ GKE+H +I RN S ++F+ +AL+D
Sbjct: 346 -------------KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALID 392
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKF 478
+Y KC ++ A F Q + D V A+++GY G + A+ F +Q R +
Sbjct: 393 IYFKCRDVEMAHKIFDQRTP-VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 451
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T ++L ACA +++L GK++H +++N + + A++++Y KC L+ A + F
Sbjct: 452 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGI 511
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
S D + NSMI N + EA+++F M G K D ++ L AC
Sbjct: 512 SXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 3/261 (1%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
IL C S + G++ H + N N + LL MY CG A+ FYQ+
Sbjct: 52 ILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
+ WN ++ G+ GQ + A+ + +M T P K+TF ++ AC ++S+ G+ +H
Sbjct: 112 SE-PWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ +E++V +L++ Y++ C+ A +F S D ++ N M+ G+ N
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
A VF M++ P+ +TF +L C E + Q + G+ +
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQ-LHGLVVSSGLEMDSPVANTL 289
Query: 621 IKLYCRYGYMKELEDFVNRMP 641
+ +Y + G++ + + MP
Sbjct: 290 LAMYAKCGHLFDARRLFDMMP 310
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/499 (35%), Positives = 288/499 (57%), Gaps = 4/499 (0%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++++ AY K +++ +FD + ++ VSWN ++ Y G ++V + ML+ D
Sbjct: 79 NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138
Query: 242 -PLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
LN TF+ L S G QIHG ++K F V L +MY K G + AR
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D+ E+N++ + +++ G GR+ +++ LF EM ER+ ISW +M+ G+T++ L ++
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A+D M+ +DQ T G +L C G+ ++ GK+VH +I R DY NIFV++AL+D
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
MY KC N++SA F +M+ + + VSW A+L GY + G SEEA+ +FS+MQ + P F
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDF 377
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T +++++CAN++SLE+G Q H + + + ALV +Y KC +E + R+F E
Sbjct: 378 TLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI 437
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
S D + +++ G+ + E + +F M G+KPD +TF G+L AC G V+
Sbjct: 438 SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGN 497
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
Q F+SM ++GI+P +HY CMI L+ R G ++E +F+N+MPF+P + CR
Sbjct: 498 QIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRF 557
Query: 659 NGYATLGEWAARRLNELNP 677
G +G+WAA L EL+P
Sbjct: 558 YGNMDIGKWAAEFLMELDP 576
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 247/520 (47%), Gaps = 97/520 (18%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL----------- 93
Y L +LC + +A+ L S+++ P P FLLN I Y K G++
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 94 --------------------DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+ LFD MP RDG SWN+++ Y G ++++ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 134 M--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M N + N+IT++ +L +++ + + +Q+HG +VK GF V + S LVD Y K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 192 MVMTDARRMFDDIQNKNAV-------------------------------SWNVIVRRYL 220
+++ AR++FD++ KN V SW ++ +
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G ++A+ +F +M E+++ +TF + L AC + + EG Q+H II+ D++ +
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L +MY KC ++ A + + +N++SWT+++ GY +G EA + F++M +
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ + D TLG +++ CA L+ ++ G + H
Sbjct: 372 I-------------------------------EPDDFTLGSVISSCANLASLEEGAQFHA 400
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ S I VSNAL+ +Y KCG++ + F ++S +D+V+W A+++GYA+ G++
Sbjct: 401 RALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS-FKDEVTWTALVSGYAQFGKAN 459
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
E + F M +P K TF +L+AC+ +E+G QI
Sbjct: 460 ETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQI 499
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 198/434 (45%), Gaps = 49/434 (11%)
Query: 26 LTKTISGHLKSDEPVSYSLYAH-LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI 84
L + I GH+ +SY L + + I ARK+ L P V + N I
Sbjct: 161 LGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL----PEKNVVMYNTLI 216
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
+CG ++D++ LF EM ERD SW +M+ +TQNG +++F +M + +Q
Sbjct: 217 MGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQY 276
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+ +VL + + L KQ+H I++ + N+ + S+LVD Y KC + A +F +
Sbjct: 277 TFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKM 336
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
KN VSW ++ Y G +EAV F M + I P +FT + + +C+ L+S EG
Sbjct: 337 TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGA 396
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q H + V +L +Y KCG +ED+ L ++ ++ ++WT++VSGYA G
Sbjct: 397 QFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFG 456
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ E LF M + D+VT +L+
Sbjct: 457 KANETIGLFESMLAHGL-------------------------------KPDKVTFIGVLS 485
Query: 385 VCAGLSEIKMGKEV-------HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
C+ ++ G ++ HG + D+ + ++D++ + G + AR + +M
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYT------CMIDLFSRAGRIEEARNFINKM 539
Query: 438 SQRRDKVSWNAVLT 451
D +SW +L+
Sbjct: 540 PFSPDAISWATLLS 553
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/648 (31%), Positives = 318/648 (49%), Gaps = 68/648 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG--------FPG--- 125
++ N+ + K G ++DAR LFD+MP++D SWN M+ +Y G F G
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 126 --------------------RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+LF M G A+Q T +VLR + + + +
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ--NKNAVSWNVIVRRYLVAG 223
HG +VK GF GNV + + LVD Y KC +++A +F ++ KN V W +V Y G
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+G +AV F M + + +TF L ACS + + G Q+HG I+K F + V
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG L++A+ +L+ ++ +++SW S++ G+ G EA LF M RN+
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM-- 362
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
ID T +LN C + I K VHG I
Sbjct: 363 -----------------------------KIDDYTFPSVLNCCV-VGSIN-PKSVHGLII 391
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + + VSNAL+DMY K G++ A F +M + +D +SW +++TGYA+ EE++
Sbjct: 392 KTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLE-KDVISWTSLVTGYAQNNSHEESL 450
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +M+ P +F ++L+ACA ++ LE GKQ+H I++ + +LV +Y
Sbjct: 451 KIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMY 510
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC CL+ A +F DVI ++I+G+ N +GR +L+ + M G +PD ITF
Sbjct: 511 AKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFI 570
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V ++F M YGI P EHY CMI L+ R G + E + +++M
Sbjct: 571 GLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDV 630
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + + CR + L E AA L EL P + + +N +
Sbjct: 631 KPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMY 678
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 146/294 (49%), Gaps = 7/294 (2%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K G++D A +F++M E+D SW +++ Y QN +L++F DM +GV+
Sbjct: 403 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 462
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+Q A++L + AE L KQ+H +K G + + +SLV Y KC + DA +
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +Q K+ ++W I+ Y G G+ ++ + M+ RP TF LFACS
Sbjct: 523 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 582
Query: 261 YEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWTSIVS 318
EG + + K+ + + +++ + G+L++A+ LLDQ D + + W S++S
Sbjct: 583 DEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 642
Query: 319 GYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ + R A LF E+ N + + + Y+ S W + LM+
Sbjct: 643 ACRVHENLELAERAATNLF-ELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMK 695
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 332/623 (53%), Gaps = 7/623 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N I Y K G + +A +F + + S+ AM+ + ++ + +E+F M
Sbjct: 105 IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRS 164
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG+ N+ ++ +L L+L + QLH +++K GF + ++L+ YGKC +
Sbjct: 165 SGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDS 224
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACS 255
++FD++ +++ SWN ++ + + A +F M R D R +FT + L A
Sbjct: 225 VLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAAR 284
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L+S G +IH +IKI FE + V+ +L Y KCG ++ L ++ R++I+WT
Sbjct: 285 GLAS-MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTE 343
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ Y G A E+F++MP RN IS+NA+L+G+ ++ +AL F M + ++
Sbjct: 344 MITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELT 403
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWF 434
TL +LN C L E K+ K++HGFI + + SN + ALLDM +CG + A +++
Sbjct: 404 DFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFS 463
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISS 492
+ + W +++ GYAR Q EEA++ F + Q E K +L C ++
Sbjct: 464 QGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAF 523
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E GKQIHC +++ + ++ +++ +Y+KC ++ AI+VF + D++ N +I G
Sbjct: 524 HEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAG 583
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN--VKLALQFFDSMRCKYGI 610
+ +G EAL V+ M+K GIKPD +TF I+ A H + V + F SM+ Y I
Sbjct: 584 HLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHI 643
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P +EHY ++ + +G ++E E+ +N+MP P + R + D CR + T+G+ AA+
Sbjct: 644 DPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAK 703
Query: 671 RLNELNPWAPFQFKITTNRFDRY 693
L + P P + + +N + Y
Sbjct: 704 HLLAMKPLDPSTYILVSNLYSAY 726
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 222/522 (42%), Gaps = 76/522 (14%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +H I K ++ L ++L+ AY K ++ +A ++F + N VS+ ++ + +
Sbjct: 92 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
++A+ +FF+M I F+F L C L G Q+H ++IK+ F V
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 209
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +Y KCG L+ L D+ R+I SW +++S A ELF +M
Sbjct: 210 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRR---- 265
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ G+ ID TL IL GL+ + +G+E+H +
Sbjct: 266 -----IDGFR---------------------IDHFTLSTILVAARGLASM-VGREIHAHV 298
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR---------------------- 440
+ + SNI V NAL+ Y KCG+++ F +M R
Sbjct: 299 IKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLAL 358
Query: 441 --------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
R+ +S+NA+L+G+ + G+ +A+ F M E + FT +L AC +
Sbjct: 359 EVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLM 418
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV--FKESSSLDVIICNSM 549
+ KQIH F+++ + N AL+++ T+C + A ++ S II SM
Sbjct: 419 EAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSM 478
Query: 550 ILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLAC----IHEGNVKLALQFFDSM 604
I G+ N + EA+ +F + EG + D + +L C HE ++ S
Sbjct: 479 ICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKS- 537
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
G + L +I +Y + M + N MP + V
Sbjct: 538 ----GFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIV 575
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 34/325 (10%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL----------------- 93
+ A A + R++ ++++ + ++N I Y KCG++
Sbjct: 281 VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVIT 340
Query: 94 --------------DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
D A +FD+MP R+ S+NA+L + QNG + L F M GV
Sbjct: 341 WTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGV 400
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
T VL + +E +SKQ+HG I+K GF N +E++L+D +C M DA++
Sbjct: 401 ELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQK 460
Query: 200 M--FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA-CSF 256
M ++ W ++ Y +EA+ +F + E ++ + A+ C
Sbjct: 461 MFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGT 520
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ G QIH +K F D V S+ MY KC ++DA + + +I+SW +
Sbjct: 521 LAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGL 580
Query: 317 VSGYAISGRIREARELFNEMPERNV 341
++G+ + + EA ++++M + +
Sbjct: 581 IAGHLLHRQGDEALSVWSKMEKAGI 605
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 198/653 (30%), Positives = 323/653 (49%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L L + C+ A+ +++ + +F+ + ++ Y KCG ++ A
Sbjct: 211 PNEFTLATGL-KACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F MPE++ +WN +L Y Q G L+LF M V N+ T VL+ A
Sbjct: 270 MFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKN 329
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + +H LI+K G+ GN + LVD Y KC + DA +F I+ + V W+ ++
Sbjct: 330 LKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC 389
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G +E++ +F M D P +T + L A + + G IH + K FE D
Sbjct: 390 LDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETD 449
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L MY+K +G + + +L+ M +
Sbjct: 450 VAVSNALVTMYMK-------------------------------NGCVHDGTKLYESMVD 478
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R++ISWNA L+G ++ L + M + + T IL C+ L ++ G++V
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I +N N FV AL+DMY KC L A + F ++S RD +W ++T YA+ Q
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTWTVIITNYAQTNQ 597
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
E+A+ F +MQ E +P++FT L+ C++++SLE G+Q+H V ++ + ++ A
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSA 657
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y KC C+E A +F+ D I N++I G+ N +G +AL F +M EGI PD
Sbjct: 658 LVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPD 717
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF GIL AC H+G V+ + F+SM +GI P ++H CM+ + R G ELEDF+
Sbjct: 718 GVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFI 777
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+M + + + + + LGE AA +L EL P + + +N F
Sbjct: 778 QKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIF 830
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 282/591 (47%), Gaps = 34/591 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ + + CAS +++ A+ + +V P L + Y KC AR + +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD SW A++ GF ++ LF +M + G+ N+ T A L++ + + L + KQ
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H K G ++ + S+LVD Y KC + A +MF + +N V+WNV++ Y G+
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ +F M+ D++ FT L C+ + +G IH +IIK +EG++ +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG DA G+ + +I+ W+++++ G+ E+ +LF+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH---------- 404
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
LMR +Q T+ +L+ ++ G+ +H + +
Sbjct: 405 ---------------------LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +++ VSNAL+ MY K G + + M RD +SWNA L+G G + +T
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD-RDLISWNAYLSGLHDCGMYDRPLT 502
Query: 465 SFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M E P+ +TF ++L +C+ + + G+Q+H +I+N + N AL+++Y
Sbjct: 503 IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYA 562
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC LE A F S D+ +I + +G +AL F M++EG+KP+ T G
Sbjct: 563 KCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAG 622
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
L C +++ Q SM K G + + ++ +Y + G M+E E
Sbjct: 623 CLSGCSSLASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAE 672
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 13/199 (6%)
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
W ++ + ++L CA+ SL K IH ++++ + +LV VY KC Y
Sbjct: 106 WSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAY 165
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A V + DV+ ++I G +++ +F M+ EGI P+ T L AC
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC-- 223
Query: 591 EGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
++ +AL M K G++ L ++ LY + G ++ MP V
Sbjct: 224 --SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281
Query: 648 MLRKIFDKCRKNGYATLGE 666
NGYA G+
Sbjct: 282 W------NVLLNGYAQRGD 294
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 198/653 (30%), Positives = 323/653 (49%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L L + C+ A+ +++ + +F+ + ++ Y KCG ++ A
Sbjct: 211 PNEFTLATGL-KACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F MPE++ +WN +L Y Q G L+LF M V N+ T VL+ A
Sbjct: 270 MFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKN 329
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + +H LI+K G+ GN + LVD Y KC + DA +F I+ + V W+ ++
Sbjct: 330 LKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC 389
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G +E++ +F M D P +T + L A + + G IH + K FE D
Sbjct: 390 LDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETD 449
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L MY+K +G + + +L+ M +
Sbjct: 450 VAVSNALVTMYMK-------------------------------NGCVHDGTKLYESMVD 478
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R++ISWNA L+G ++ L + M + + T IL C+ L ++ G++V
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I +N N FV AL+DMY KC L A + F ++S RD +W ++T YA+ Q
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTWTVIITNYAQTNQ 597
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
E+A+ F +MQ E +P++FT L+ C++++SLE G+Q+H V ++ + ++ A
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSA 657
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y KC C+E A +F+ D I N++I G+ N +G +AL F +M EGI PD
Sbjct: 658 LVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPD 717
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF GIL AC H+G V+ + F+SM +GI P ++H CM+ + R G ELEDF+
Sbjct: 718 GVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFI 777
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+M + + + + + LGE AA +L EL P + + +N F
Sbjct: 778 QKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIF 830
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 282/591 (47%), Gaps = 34/591 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ + + CAS +++ A+ + +V P L + Y KC AR + +MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD SW A++ GF ++ LF +M + G+ N+ T A L++ + + L + KQ
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H K G ++ + S+LVD Y KC + A +MF + +N V+WNV++ Y G+
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ +F M+ D++ FT L C+ + +G IH +IIK +EG++ +
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG DA G+ + +I+ W+++++ G+ E+ +LF+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH---------- 404
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
LMR +Q T+ +L+ ++ G+ +H + +
Sbjct: 405 ---------------------LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK 443
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +++ VSNAL+ MY K G + + M RD +SWNA L+G G + +T
Sbjct: 444 YGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD-RDLISWNAYLSGLHDCGMYDRPLT 502
Query: 465 SFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M E P+ +TF ++L +C+ + + G+Q+H +I+N + N AL+++Y
Sbjct: 503 IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYA 562
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC LE A F S D+ +I + +G +AL F M++EG+KP+ T G
Sbjct: 563 KCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAG 622
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
L C +++ Q SM K G + + ++ +Y + G M+E E
Sbjct: 623 CLSGCSSLASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAE 672
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 13/199 (6%)
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
W ++ + ++L CA+ SL K IH ++++ + +LV VY KC Y
Sbjct: 106 WSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAY 165
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A V + DV+ ++I G +++ +F M+ EGI P+ T L AC
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC-- 223
Query: 591 EGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
++ +AL M K G++ L ++ LY + G ++ MP V
Sbjct: 224 --SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281
Query: 648 MLRKIFDKCRKNGYATLGE 666
NGYA G+
Sbjct: 282 W------NVLLNGYAQRGD 294
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 189/623 (30%), Positives = 332/623 (53%), Gaps = 7/623 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N I Y K G + +A +F + + S+ AM+ + ++ + +E+F M
Sbjct: 123 IHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRS 182
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG+ N+ ++ +L L+L + QLH +++K GF + ++L+ YGKC +
Sbjct: 183 SGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDS 242
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACS 255
++FD++ +++ SWN ++ + + A +F M R D R +FT + L A
Sbjct: 243 VLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAAR 302
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L+S G +IH +IKI FE + V+ +L Y KCG ++ L ++ R++I+WT
Sbjct: 303 GLAS-MVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTE 361
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ Y G A E+F++MP RN IS+NA+L+G+ ++ +AL F M + ++
Sbjct: 362 MITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELT 421
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWF 434
TL +LN C L E K+ K++HGFI + + SN + ALLDM +CG + A +++
Sbjct: 422 DFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFS 481
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISS 492
+ + W +++ GYAR Q EEA++ F + Q E K +L C ++
Sbjct: 482 QGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAF 541
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E GKQIHC +++ + ++ +++ +Y+KC ++ AI+VF + D++ N +I G
Sbjct: 542 HEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAG 601
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN--VKLALQFFDSMRCKYGI 610
+ +G EAL V+ M+K GIKPD +TF I+ A H + V + F SM+ Y I
Sbjct: 602 HLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHI 661
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P +EHY ++ + +G ++E E+ +N+MP P + R + D CR + T+G+ AA+
Sbjct: 662 DPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAK 721
Query: 671 RLNELNPWAPFQFKITTNRFDRY 693
L + P P + + +N + Y
Sbjct: 722 HLLAMKPLDPSTYILVSNLYSAY 744
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 222/522 (42%), Gaps = 76/522 (14%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +H I K ++ L ++L+ AY K ++ +A ++F + N VS+ ++ + +
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
++A+ +FF+M I F+F L C L G Q+H ++IK+ F V
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 227
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +Y KCG L+ L D+ R+I SW +++S A ELF +M
Sbjct: 228 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRR---- 283
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ G+ ID TL IL GL+ + +G+E+H +
Sbjct: 284 -----IDGFR---------------------IDHFTLSTILVAARGLASM-VGREIHAHV 316
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR---------------------- 440
+ + SNI V NAL+ Y KCG+++ F +M R
Sbjct: 317 IKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLAL 376
Query: 441 --------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
R+ +S+NA+L+G+ + G+ +A+ F M E + FT +L AC +
Sbjct: 377 EVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLM 436
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV--FKESSSLDVIICNSM 549
+ KQIH F+++ + N AL+++ T+C + A ++ S II SM
Sbjct: 437 EAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSM 496
Query: 550 ILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLAC----IHEGNVKLALQFFDSM 604
I G+ N + EA+ +F + EG + D + +L C HE ++ S
Sbjct: 497 ICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKS- 555
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
G + L +I +Y + M + N MP + V
Sbjct: 556 ----GFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIV 593
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 34/325 (10%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL----------------- 93
+ A A + R++ ++++ + ++N I Y KCG++
Sbjct: 299 VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVIT 358
Query: 94 --------------DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
D A +FD+MP R+ S+NA+L + QNG + L F M GV
Sbjct: 359 WTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGV 418
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
T VL + +E +SKQ+HG I+K GF N +E++L+D +C M DA++
Sbjct: 419 ELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQK 478
Query: 200 M--FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA-CSF 256
M ++ W ++ Y +EA+ +F + E ++ + A+ C
Sbjct: 479 MFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGT 538
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ G QIH +K F D V S+ MY KC ++DA + + +I+SW +
Sbjct: 539 LAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGL 598
Query: 317 VSGYAISGRIREARELFNEMPERNV 341
++G+ + + EA ++++M + +
Sbjct: 599 IAGHLLHRQGDEALSVWSKMEKAGI 623
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 313/611 (51%), Gaps = 32/611 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KCG++D AR +FD+M ++D SW M+ Y NG LELF M V
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+++ + ++AE ++L K++HG +++ ++++ + L+ Y KC A+++
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +Q ++ V+W+ I+ + G +EA+ +F +M + ++P T + L AC+ LS
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G IH +K D + D +L MY KC
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKC---------------------------- 478
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G A FN M R++++WN+++ GY + A+D + +R + + D T+
Sbjct: 479 ---GFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
++ CA L+++ G +HG I + + S+ V NAL+DMY KCG+L SA F +
Sbjct: 536 GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFT 595
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
+D+V+WN ++ Y + G ++EA++SF +M+ E P+ TF ++L A A +++ +G
Sbjct: 596 KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H +I+ + N + +L+++Y KC L+Y+ ++F E D + N+M+ G+ + G
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
A+ +F LM++ ++ D ++F +L AC H G V+ + F SM KY I P LEHY C
Sbjct: 716 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
M+ L R G E F+ MP P + + CR + LGE A L +L P
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 680 PFQFKITTNRF 690
P F + ++ +
Sbjct: 836 PAHFVVLSSIY 846
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 158/572 (27%), Positives = 274/572 (47%), Gaps = 37/572 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ ++ Y K G+L AR +FD+MP+RD +WNAM+ +Q+ P ++ F M
Sbjct: 164 VFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQL 223
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV + ++ N+ + + + + +HG + +R F V + L+D Y KC +
Sbjct: 224 VGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDV 281
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD + +++ VSW ++ Y G E + +F KM ++R + +A A +
Sbjct: 282 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+G +IHG ++ + D +V L MY KCG E A+ L R++++W++I
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ +G EA LF EM + + ++
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKM-------------------------------KPNR 430
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VTL IL CA LS +K+GK +H F + D S++ AL+ MY KCG +A F +
Sbjct: 431 VTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR 490
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
MS RD V+WN+++ GYA+ G A+ F +++ P T ++ ACA ++ L+Q
Sbjct: 491 MSS-RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFC 554
G IH +++ +E + + AL+++Y KC L A +F ++ + D + N +I +
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N +EA+ F M+ E P+ +TF +L A + + + F + + G +
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI-IQMGFLSNT 668
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+I +Y + G + E N M TV
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 700
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 306/666 (45%), Gaps = 55/666 (8%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLL 80
S T T + S +Y+ Y H +L +S K + ++ + ++ F + L
Sbjct: 10 SFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHL 69
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ KC D AR +FD P WN+M+ AYT++ LE++ M G+
Sbjct: 70 INLYSLFHKC---DLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ T+ VL++ L L HG I +RG +V + + LVD Y K + AR +
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V+WN ++ + + EAV F M + P + + N LS+
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
IHG + + DF V L ++Y KCG ++ AR + DQ +++ +SW ++++GY
Sbjct: 247 ELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A +G E ELF++M NV + K + FL T D+++
Sbjct: 305 AHNGCFVEVLELFDKMKLGNV-------------RINKVSAVSAFLAAAETIDLEK---- 347
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
GKE+HG + S+I V+ L+ MY KCG A+ F+ + Q
Sbjct: 348 --------------GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL-QG 392
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQI 499
RD V+W+A++ + G EEA++ F EMQ + +P++ T ++L ACA++S L+ GK I
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
HCF ++ + ++ ALV +Y KC A+ F SS D++ NS+I G+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE-HYE 618
A+++F ++ I PD T G++ AC L D C +G+I +L +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACA-------LLNDLDQGTCIHGLIVKLGFESD 565
Query: 619 CMIK-----LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA--TLGEWAARR 671
C +K +Y + G + E N+ F I +NG+A + + R
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625
Query: 672 LNELNP 677
L +P
Sbjct: 626 LENFHP 631
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 260/555 (46%), Gaps = 61/555 (10%)
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S N + Y +L S L Q+H I+ GF + + + L++ Y
Sbjct: 26 SSTYTNYLHYPRLLSSCKH---LNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDL 81
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD N + + WN ++R Y + EA+ M++ M+ + + P +TF L AC+
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG+ HG I D RGL ER++ +
Sbjct: 142 ALNLQEGVWFHGEI--------------------------DRRGL-----ERDVFIGAGL 170
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
V Y+ G ++ ARE+F++MP+R+V++WNAM+AG ++S EA+DF M+ +
Sbjct: 171 VDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSS 230
Query: 377 VT-LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
V+ L L +C LS I++ + +HG++ R D+SS VSN L+D+Y KCG++ AR F
Sbjct: 231 VSLLNLFPGICK-LSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFD 287
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLE 494
QM +D VSW ++ GYA G E + F +M+ R +K + + A A LE
Sbjct: 288 QMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK+IH ++ + +++ L+ +Y KC E A ++F D++ +++I
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGII 611
EAL +F M+ + +KP+ +T IL AC +KL S+ C K +
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG----KSIHCFTVKADMD 462
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE----- 666
L ++ +Y + G+ NRM V I NGYA +G+
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI------NGYAQIGDPYNAI 516
Query: 667 --WAARRLNELNPWA 679
+ RL+ +NP A
Sbjct: 517 DMFYKLRLSAINPDA 531
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 15/396 (3%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y KCG A F+ M RD +WN+++ Y Q G P +++F + S ++ +
Sbjct: 472 VSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDA 531
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T V+ + A +L +HGLIVK GF + ++++L+D Y KC + A +F+
Sbjct: 532 GTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591
Query: 204 IQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
K+ V+WNVI+ Y+ G+ KEA+ F +M E+ P + TF + L A ++L++ E
Sbjct: 592 TDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 651
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
GM H II++ F + +V SL +MY KCG+L+ + L ++ D ++ +SW +++SGYA+
Sbjct: 652 GMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAV 711
Query: 323 SGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR---KTTKDID 375
G A LF+ M E V +S+ ++L+ + L +E M D++
Sbjct: 712 HGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLE 771
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ L AGL + E GFI + V ALL R N++ +
Sbjct: 772 HYACMVDLLGRAGLFD-----ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALD 826
Query: 436 QMS--QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ + R+ + + + YA+ G+ +A + S+M
Sbjct: 827 HLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKM 862
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N I+ Y KCG+L A LF++ +D +WN ++ AY QNG + F M
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
N +T+ +VL ++A H I++ GF N ++ +SL+D Y KC + + +
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 689
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+++ +K+ VSWN ++ Y V G+G A+ +F M ++ + +F + L AC
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGL 749
Query: 260 PYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIV 317
EG +I H + K + D + ++ + G ++ G + P E + W +++
Sbjct: 750 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809
Query: 318 SGYAISGRIR---EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ ++ A + ++ RN + + + Y +S W +A R D
Sbjct: 810 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK----ARSKMND- 864
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGF 401
L L G S +++ +VH F
Sbjct: 865 ------LGLKKTPGCSWVELKNKVHAF 885
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 285/497 (57%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F IQ N + WN ++R Y ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ +E D V SL MY + GRLEDA + D+ R+++S+T++
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA SG IR A+E+F+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +L+ CA +++G++VH +I + + SN+ + NAL+D+Y KCG + +A F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D VSWN ++ GY +EA+ F EM + P+ T ++L ACA++ +++
Sbjct: 259 LSC-KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 496 GKQIHCFVIRNCYEINVV--CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + ++ R +L+++Y KC +E A +VF + N+MI GF
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R ++F M+K GI+PD ITF G+L AC H G + L F SM Y I P+
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPK 437
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE ++ + MP P + + CR++G L E AR L
Sbjct: 438 LEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLM 497
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 498 KVEPENPGSYVLLSNIY 514
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 239/539 (44%), Gaps = 99/539 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F + E + WN ML Y + P L+L++ M G+ N T+ +L+S A+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR---------------- 199
+Q+HG ++K G+ ++ + +SL+ Y + + DA +
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 200 ---------------MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
MFD+I K+ VSWN ++ Y G+ KEA+ +F +M++ ++RP
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T L AC+ S G Q+H I F + ++ +L ++Y KCG++E A GL +
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
++++SW +++ GY T L+KEAL
Sbjct: 259 LSCKDVVSWNTLIGGY-------------------------------THMNLYKEALLLF 287
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + + VT+ IL CA L I +G+ +H +I + D ++ + +L+DMY
Sbjct: 288 QEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYA 347
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KCG++ +A F M + SWNA++ G+A G++ FS M+ P TF
Sbjct: 348 KCGDIEAAHQVFNSMLH-KSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFV 406
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC++ L+ G+ I K +Y I + L
Sbjct: 407 GLLSACSHSGKLDLGRHIF-----------------------KSMTQDYDI-----TPKL 438
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ C +LG H+ +EA E+ M E PD + + +L AC GN++LA F
Sbjct: 439 EHYGCMIDLLG--HSGLFKEAKEMIKTMPME---PDGVIWCSLLKACRRHGNLELAESF 492
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 67/471 (14%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA-- 96
P SY+ + L + CA SKA E +++ +++ P +++ I Y + G L+DA
Sbjct: 64 PNSYT-FPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHK 122
Query: 97 -----------------------------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
+ +FDE+P +D SWNAM+ Y + G
Sbjct: 123 VFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEA 182
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF +M + V ++ T VL + A+ + + +Q+H I GF N+ + ++L+D
Sbjct: 183 LELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDL 242
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F+ + K+ VSWN ++ Y KEA+++F +MLR P + T
Sbjct: 243 YSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTI 302
Query: 248 ANALFACSFLSSPYEGMQIHGVIIK--IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
+ L AC+ L + G IH I K D + SL +MY KCG +E A + +
Sbjct: 303 VSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM 362
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+++ SW +++ G+A+ GR +LF+
Sbjct: 363 LHKSLSSWNAMIFGFAMHGRANAGFDLFSR------------------------------ 392
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKC 424
MRK + D +T +L+ C+ ++ +G+ + + ++ D + + ++D+
Sbjct: 393 -MRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHS 451
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
G + A+ M D V W ++L R G E A SF+ + P
Sbjct: 452 GLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELA-ESFARNLMKVEP 501
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 158/363 (43%), Gaps = 20/363 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ CA S+++ R++ S + + ++N I+ Y KCG ++ A GLF+ + +D
Sbjct: 204 VLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKD 263
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN ++G YT L LF +M SG S N +T ++L + A + + + +H
Sbjct: 264 VVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHV 323
Query: 168 LIVK--RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
I K + L +SL+D Y KC + A ++F+ + +K+ SWN ++ + + G
Sbjct: 324 YIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRA 383
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLGS 284
+F +M + I P + TF L ACS G I + + D G
Sbjct: 384 NAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGC 443
Query: 285 LTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIRE----ARELFNEMPER 339
+ ++ G ++A+ ++ P E + + W S++ G + AR L PE
Sbjct: 444 MIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPE- 502
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
N S+ + Y + W E L+ G + G S I++ EVH
Sbjct: 503 NPGSYVLLSNIYATAGEWDEVAKVRALLN-----------GKGMKKVPGCSSIEIDSEVH 551
Query: 400 GFI 402
FI
Sbjct: 552 EFI 554
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
YAI VF + +I N+M+ G+ + AL+++ +M G+ P+ TF +L +C
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
+ Q + K G P L + +I +Y + G +++ +R V
Sbjct: 78 KSKAFEEGQQIHGHV-LKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136
Query: 650 RKIFDKCRKNGYATLG 665
I GYA+ G
Sbjct: 137 ALI------TGYASSG 146
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 283/509 (55%), Gaps = 3/509 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ A ++ D R+F + ++AVS+N ++ + G+ +V ++ +L
Sbjct: 78 NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137
Query: 237 RED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
RE+ +RP T + + S LS G +H ++++ F V L +MY K G +
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
DAR + + + + ++ + ++++G I +A+ LF M +R+ I+W M+ G T++
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L EALD MR IDQ T G IL C L+ + GK++H +I R Y N+FV +
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGS 317
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KC ++R A F +M+ R + +SW A++ GY + SEEA+ +FSEMQ + +
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRMTCR-NIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P FT +++++CAN++SLE+G Q HC + + + ALV +Y KC +E A R+
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E S D + +++ G+ + +E +++F M G+KPD +TF G+L AC G V
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLV 496
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ +FDSM+ + I+P +HY CMI LY R G KE E+F+ +MP +P +
Sbjct: 497 EKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR G +G+WAA L E +P P +
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPASY 585
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 98/494 (19%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP----------------------- 104
L TF PP FLLN + Y K G L AR +FDEMP
Sbjct: 39 LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDM 98
Query: 105 --------ERDGGSWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAE 155
ERD S+NA++ ++ G P R+++L+ + V +IT + ++ ++
Sbjct: 99 ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ---------- 205
+ + +H +++ GF + S LVD Y K ++ DARR+F +++
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218
Query: 206 ---------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++++++W +V G EA+ +F +M E +
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLD 303
+TF + L AC L++ EG QIH I + +E D+V +GS L +MY KC + A +
Sbjct: 279 YTFGSILTACGALAASEEGKQIHAYITRTWYE-DNVFVGSALVDMYSKCRSIRLAEAVFR 337
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ RNIISWT+++ GY + EA F+EM +
Sbjct: 338 RMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI---------------------- 375
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D TLG +++ CA L+ ++ G + H + I VSNAL+ +Y K
Sbjct: 376 ---------KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGK 426
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
CG++ A F +MS D+VSW A++TGYA+ G+++E + F +M +P TF
Sbjct: 427 CGSIEDAHRLFDEMS-FHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIG 485
Query: 483 LLAACANISSLEQG 496
+L+AC+ +E+G
Sbjct: 486 VLSACSRAGLVEKG 499
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 212/434 (48%), Gaps = 40/434 (9%)
Query: 266 IHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H +I+K + +L L Y K GRL AR + D+ + N+ + +++S A S
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLIL 383
+ + LF MPER+ +S+NA++ G++ + ++ + L+R+ + ++TL ++
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--- 440
V + LS+ +G VH + R + + FV + L+DMY K G +R AR F +M +
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 441 ---------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
RD ++W ++TG + G EA+ F M+ E
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
++TF ++L AC +++ E+GKQIH ++ R YE NV ALV++Y+KC + A
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
VF+ + ++I +MI+G+ N EA+ F M+ +GIKPD T ++ +C +
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
+++ QF + G++ + ++ LY + G +++ + M F+ V +
Sbjct: 394 SLEEGAQFH-CLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452
Query: 653 FDKCRKNGYATLGE 666
GYA G+
Sbjct: 453 ------TGYAQFGK 460
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 211/476 (44%), Gaps = 65/476 (13%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIV-------- 59
+ + +L + S +PT + SD + +S++ + +L + A V
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMY 191
Query: 60 -------EARK----LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+AR+ +E+ V Y T LL +C ++DA+GLF M +RD
Sbjct: 192 AKMGLIRDARRVFQEMEAKTVVMYNTLITGLL--------RCKMIEDAKGLFQLMVDRDS 243
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+W M+ TQNG L++F M GV +Q T+ ++L + KQ+H
Sbjct: 244 ITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAY 303
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
I + + NV + S+LVD Y KC + A +F + +N +SW ++ Y +EA
Sbjct: 304 ITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEA 363
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
V F +M + I+P +FT + + +C+ L+S EG Q H + + V +L +
Sbjct: 364 VRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTL 423
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISW 344
Y KCG +EDA L D+ + +SWT++V+GYA G+ +E +LF +M + +++
Sbjct: 424 YGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTF 483
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+L+ +R+ L ++ D+ M+K H +
Sbjct: 484 IGVLSACSRAGLVEKGCDYFDSMQKD----------------------------HDIVPI 515
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+D+ + ++D+Y + G + A + QM D W +L+ RG E
Sbjct: 516 DDHYT------CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 164/381 (43%), Gaps = 29/381 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + A E +++ + + + VF+ + ++ Y KC ++ A +F M
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ SW AM+ Y QN + F +M G+ + T +V+ S A L Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L + G + + ++LV YGKC + DA R+FD++ + VSW +V Y G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQIHGVIIKIDFEGD 278
KE + +F KML ++P TF L ACS ++ MQ I+ ID
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDH-- 518
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFN 334
+ ++Y + GR ++A + Q P + W +++S + G + + A E
Sbjct: 519 ---YTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLL 575
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
E +N S+ + + + W E V +R+ +D + G S IK
Sbjct: 576 ETDPQNPASYVLLCSMHAAKGQWTE----VAHLRRGMRDRQ-------VKKEPGCSWIKY 624
Query: 395 GKEVHGFI---HRNDYSSNIF 412
+VH F + +SS I+
Sbjct: 625 KNKVHIFSADDQSHPFSSRIY 645
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 193/634 (30%), Positives = 322/634 (50%), Gaps = 33/634 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + C +K +V +++ +V F+ N + Y KCG DAR LFD +P
Sbjct: 13 FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP 72
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+R SWNA+ Y + G + LF DM SG+ N+ + ++++ + ++
Sbjct: 73 DRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRK 132
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++K G+ + ++LVD Y K ++ DA +FD+I + VSWN I+ ++
Sbjct: 133 IHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEY 192
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+ + +M + + P FT ++AL AC+ ++ G Q+H +IK+D D +
Sbjct: 193 HHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG 252
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC ++DAR +F MPER++I+W
Sbjct: 253 LIDMYSKCNSMDDAR-------------------------------LVFKLMPERDMIAW 281
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA+++G++++ +EA LM +Q TL +L A L M +++H +
Sbjct: 282 NAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLK 341
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + + +V N+L+D Y KCG++ A F + S D V + +++T YA+ GQ EEA+
Sbjct: 342 SGFEFDNYVVNSLIDTYGKCGHVEDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALR 400
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
+ EMQ +P F +LL ACA++S+ EQGKQ+H +++ + ++ +LV +Y
Sbjct: 401 LYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYA 460
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC +E A F ++ ++MI G + G+EAL++F M K G+ P+HIT
Sbjct: 461 KCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVS 520
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V A +F+SM+ +GI P EHY CMI L R G ++ + VN+MPF
Sbjct: 521 VLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQ 580
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + R + LGE AA L L P
Sbjct: 581 ANALVWGALLGAARIHKNIDLGEQAAEMLLALEP 614
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 262/514 (50%), Gaps = 34/514 (6%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M+ G+ N+ + +VL++ +L + KQ+HG++V GF + + +SLV Y KC
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
DAR +FD I +++ VSWN + Y+ + EAV +F M+ IRP F+ ++ +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L +G +IHG +IK+ ++ D +L +MY K G LEDA + D+ + +I+SW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+I++G + A EL E M K+
Sbjct: 181 NAIIAGCVLHEYHHRALELLRE-------------------------------MNKSGMC 209
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+ TL L CAG++ ++G+++H + + D S+ F+ L+DMY KC ++ AR+
Sbjct: 210 PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLV 269
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISS 492
F M + RD ++WNAV++G+++ + EEA + F M E ++ T T+L + A + +
Sbjct: 270 FKLMPE-RDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQA 328
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+QIH +++ +E + +L++ Y KC +E A RVF+ES +D+++ S++
Sbjct: 329 NYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTA 388
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + +G EAL ++ M+ GIKPD +L AC + Q + K+G +
Sbjct: 389 YAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHI-LKFGFMS 447
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ ++ +Y + G +++ +R+P V
Sbjct: 448 DIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 225/461 (48%), Gaps = 34/461 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +SL + + +C + V+ RK+ L+ F N ++ Y K G L+DA
Sbjct: 109 PNEFSL-SSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASS 167
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FDE+ + D SWNA++ + + R LEL +MN SG+ N T ++ L++ A
Sbjct: 168 VFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMAL 227
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ +QLH ++K + L L+D Y KC M DAR +F + ++ ++WN ++
Sbjct: 228 RELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISG 287
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ +EA +F M E I T + L + + L + Y QIH + +K FE D
Sbjct: 288 HSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFD 347
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ V+ SL + Y KCG +EDA + ++ +++ +TS+V+ YA G+ EA L+ EM +
Sbjct: 348 NYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQD 407
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R + D +LN CA LS + GK+V
Sbjct: 408 RGI-------------------------------KPDSFVCSSLLNACASLSAYEQGKQV 436
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I + + S+IF N+L++MY KCG++ A F ++ R VSW+A++ G A+ G
Sbjct: 437 HVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPV-RGIVSWSAMIGGLAQHGY 495
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+EA+ F +M + P+ T ++L AC + + + K
Sbjct: 496 GKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKH 536
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 328/637 (51%), Gaps = 39/637 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + C+ + + RK+ V F+ N + Y KCG LDD+R LF +
Sbjct: 85 FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIV 144
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ SWNA+ Y Q+ G + LF +M SG+ N+ + + +L + A E + ++
Sbjct: 145 ERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRK 204
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGL++K G + ++LVD Y K + A +F DI + + VSWN I+ ++
Sbjct: 205 IHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDC 264
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+++ +M RP FT ++AL AC+ + G Q+H +IK+D D
Sbjct: 265 NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC ++DAR ++ MP++++I+W
Sbjct: 325 LVDMYSKCEMMDDAR-------------------------------RAYDSMPKKDIIAW 353
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKT-TKDID--QVTLGLILNVCAGLSEIKMGKEVHGF 401
NA+++GY++ + LD V L K ++DID Q TL +L A L IK+ K++H
Sbjct: 354 NALISGYSQC---GDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTI 410
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
++ S+ +V N+LLD Y KC ++ A F + + D V++ +++T Y++ G EE
Sbjct: 411 SIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE-DLVAYTSMITAYSQYGDGEE 469
Query: 462 AMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ + +MQ + +P F +LL ACAN+S+ EQGKQ+H I+ + ++ +LV
Sbjct: 470 ALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVN 529
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC +E A R F E + ++ ++MI G+ + G+EAL +F M ++G+ P+HIT
Sbjct: 530 MYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHIT 589
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L AC H G V Q+F+ M +GI P EHY CMI L R G + E + VN +
Sbjct: 590 LVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSI 649
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
PF + + R + LG+ AA+ L +L P
Sbjct: 650 PFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEP 686
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/616 (26%), Positives = 302/616 (49%), Gaps = 42/616 (6%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+L ++L+ F + L N + Y KC AR L DE E D SW+++L Y QNG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
F L +F +M GV N+ T+ +VL++ + + +L + +++HG+ V GF + + +
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+LV Y KC ++ D+RR+F I +N VSWN + Y+ + EAV +F +M+R I P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
F+ + L AC+ L G +IHG+++K+ + D +L +MY K G +E A +
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+++SW +I++G + A L +E
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDE--------------------------- 274
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
M+ + + TL L CA + ++G+++H + + D S++F + L+DMY
Sbjct: 275 ----MKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYS 330
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFE 481
KC + AR + M ++D ++WNA+++GY++ G +A++ FS+M E ++ T
Sbjct: 331 KCEMMDDARRAYDSMP-KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLS 389
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
T+L + A++ +++ KQIH I++ + +L++ Y KC ++ A ++F+E +
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
D++ SMI + G EAL+++ M+ IKPD +L AC + + Q
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH 509
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
K+G + + ++ +Y + G +++ + + +P V I GY
Sbjct: 510 -VHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMI------GGY 562
Query: 662 ATLGEW--AARRLNEL 675
A G A R N++
Sbjct: 563 AQHGHGKEALRLFNQM 578
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 211/451 (46%), Gaps = 40/451 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L + L + CA+ R+L S+L+ +F ++ Y KC +DDAR
Sbjct: 282 PNMFTLSSAL-KACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARR 340
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+D MP++D +WNA++ Y+Q G + LF M + NQ T + VL+S A
Sbjct: 341 AYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQA 400
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ V KQ+H + +K G + + +SL+D YGKC + +A ++F++ ++ V++ ++
Sbjct: 401 IKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITA 460
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G+G+EA+ ++ +M DI+P F ++ L AC+ LS+ +G Q+H IK F D
Sbjct: 461 YSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCD 520
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
SL MY KCG +EDA + R I+SW++++ GYA G +EA LFN+M
Sbjct: 521 IFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLR 580
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V + +TL +L C + GK+
Sbjct: 581 DGVPP-------------------------------NHITLVSVLCACNHAGLVNEGKQ- 608
Query: 399 HGFIHRNDYSSNIFVSN----ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+ + + I + ++D+ + G L A + D W A+L G A
Sbjct: 609 --YFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALL-GAA 665
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
R ++ E ++M ++ P K LLA
Sbjct: 666 RIHKNIELGQKAAKMLFDLEPEKSGTHVLLA 696
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 171/342 (50%), Gaps = 33/342 (9%)
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
M++H +IK F D + L +Y KC R AR L+D+ E +++SW+S++SGY +
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G + EA +FNEM LL + +F F +L
Sbjct: 61 GFVEEALLVFNEM-----------------CLLGVKCNEFTFPS--------------VL 89
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C+ ++ MG++VHG + S+ FV+N L+ MY KCG L +R F + + R+
Sbjct: 90 KACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVE-RNV 148
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA+ + Y + EA+ F EM + P++F+ +L ACA + + G++IH
Sbjct: 149 VSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGL 208
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ +++ ALV++Y+K +E A+ VF++ + DV+ N++I G ++ A
Sbjct: 209 MLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA 268
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
L + MK G +P+ T L AC G +L Q S+
Sbjct: 269 LMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSL 310
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 167/336 (49%), Gaps = 29/336 (8%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
AS +AI +++ + + +++N ++ YGKC ++D+A +F+E D ++
Sbjct: 396 ASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYT 455
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+M+ AY+Q G L+L+L M + + + +++L + A KQLH +K
Sbjct: 456 SMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKF 515
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
GF ++ +SLV+ Y KC + DA R F +I N+ VSW+ ++ Y G+GKEA+ +F
Sbjct: 516 GFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLF 575
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG--------- 283
+MLR+ + P + T + L AC+ EG Q FE +V+ G
Sbjct: 576 NQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQY--------FEKMEVMFGIKPTQEHYA 627
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFNEMPE 338
+ ++ + G+L +A L++ P E + W +++ I I + A+ LF+ PE
Sbjct: 628 CMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPE 687
Query: 339 RNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKD 373
++ + +LA Y + +W+ V +RK KD
Sbjct: 688 KS--GTHVLLANIYASAGMWEN----VAKVRKFMKD 717
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 312/611 (51%), Gaps = 32/611 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KCG++D AR +FD+M ++D SW M+ Y NG LELF M V
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+++ + ++AE ++L K++HG +++ ++++ + L+ Y KC A+++
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +Q ++ V+W+ I+ + G +EA+ +F +M + ++P T + L AC+ LS
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G IH +K D + D +L MY KC
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKC---------------------------- 478
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G A FN M R++++WN+++ GY + A+D + +R + + D T+
Sbjct: 479 ---GFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMV 535
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
++ CA L+++ G +HG I + + S+ V NAL+DMY KCG+L SA F +
Sbjct: 536 GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFT 595
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
+D+V+WN ++ Y + G ++EA++SF +M+ E P+ TF ++L A A +++ +G
Sbjct: 596 KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H +I+ + N + +L+++Y KC L Y+ ++F E D + N+M+ G+ + G
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
A+ +F LM++ ++ D ++F +L AC H G V+ + F SM KY I P LEHY C
Sbjct: 716 DRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
M+ L R G E F+ MP P + + CR + LGE A L +L P
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 680 PFQFKITTNRF 690
P F + ++ +
Sbjct: 836 PAHFVVLSSIY 846
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 306/666 (45%), Gaps = 55/666 (8%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLL 80
S T T + S +Y+ Y H +L +S K + ++ + ++ F + L
Sbjct: 10 SFTSIATXASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITHL 69
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ KC D AR +FD P WN+M+ AYT++ LE++ M G+
Sbjct: 70 INLYSLFHKC---DLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ T+ VL++ L L HG I +RG +V + + LVD Y K + AR +
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V+WN ++ + + EAV F M + P + + N LS+
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
IHG + + DF V L ++Y KCG ++ AR + DQ +++ +SW ++++GY
Sbjct: 247 ELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A +G E ELF++M NV + K + FL T D+++
Sbjct: 305 AHNGCFVEVLELFDKMKLGNV-------------RINKVSAVSAFLAAAETIDLEK---- 347
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
GKE+HG + S+I V+ L+ MY KCG A+ F+ + Q
Sbjct: 348 --------------GKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL-QG 392
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQI 499
RD V+W+A++ + G EEA++ F EMQ + +P++ T ++L ACA++S L+ GK I
Sbjct: 393 RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI 452
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
HCF ++ + ++ ALV +Y KC A+ F SS D++ NS+I G+
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDP 512
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE-HYE 618
A+++F ++ I PD T G++ AC L D C +G+I +L +
Sbjct: 513 YNAIDMFYKLRLSAINPDAGTMVGVVPACA-------LLNDLDQGTCIHGLIVKLGFESD 565
Query: 619 CMIK-----LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA--TLGEWAARR 671
C +K +Y + G + E N+ F I +NG+A + + R
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625
Query: 672 LNELNP 677
L +P
Sbjct: 626 LENFHP 631
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 158/572 (27%), Positives = 274/572 (47%), Gaps = 37/572 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ ++ Y K G+L AR +FD+MP+RD +WNAM+ +Q+ P ++ F M
Sbjct: 164 VFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQL 223
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV + ++ N+ + + + + +HG + +R F V + L+D Y KC +
Sbjct: 224 VGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDVDV 281
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD + +++ VSW ++ Y G E + +F KM ++R + +A A +
Sbjct: 282 ARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAE 341
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+G +IHG ++ + D +V L MY KCG E A+ L R++++W++I
Sbjct: 342 TIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAI 401
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ +G EA LF EM + + ++
Sbjct: 402 IAALVQTGYPEEALSLFQEMQNQKM-------------------------------KPNR 430
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VTL IL CA LS +K+GK +H F + D S++ AL+ MY KCG +A F +
Sbjct: 431 VTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR 490
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
MS RD V+WN+++ GYA+ G A+ F +++ P T ++ ACA ++ L+Q
Sbjct: 491 MSS-RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQ 549
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFC 554
G IH +++ +E + + AL+++Y KC L A +F ++ + D + N +I +
Sbjct: 550 GTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYM 609
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N +EA+ F M+ E P+ +TF +L A + + + F + + G +
Sbjct: 610 QNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACI-IQMGFLSNT 668
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+I +Y + G + E N M TV
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTV 700
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 260/555 (46%), Gaps = 61/555 (10%)
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S N + Y +L S L Q+H I+ GF + + + L++ Y
Sbjct: 26 SSTYTNYLHYPRLLSSCKH---LNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDL 81
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD N + + WN ++R Y + EA+ M++ M+ + + P +TF L AC+
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG+ HG I D RGL ER++ +
Sbjct: 142 ALNLQEGVWFHGEI--------------------------DRRGL-----ERDVFIGAGL 170
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
V Y+ G ++ ARE+F++MP+R+V++WNAM+AG ++S EA+DF M+ +
Sbjct: 171 VDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSS 230
Query: 377 VT-LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
V+ L L +C LS I++ + +HG++ R D+SS VSN L+D+Y KCG++ AR F
Sbjct: 231 VSLLNLFPGICK-LSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFD 287
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLE 494
QM +D VSW ++ GYA G E + F +M+ R +K + + A A LE
Sbjct: 288 QMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK+IH ++ + +++ L+ +Y KC E A ++F D++ +++I
Sbjct: 347 KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALV 406
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGII 611
EAL +F M+ + +KP+ +T IL AC +KL S+ C K +
Sbjct: 407 QTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG----KSIHCFTVKADMD 462
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE----- 666
L ++ +Y + G+ NRM V I NGYA +G+
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLI------NGYAQIGDPYNAI 516
Query: 667 --WAARRLNELNPWA 679
+ RL+ +NP A
Sbjct: 517 DMFYKLRLSAINPDA 531
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N I+ Y KCG+L A LF++ +D +WN ++ AY QNG + F M
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
N +T+ +VL ++A H I++ GF N ++ +SL+D Y KC + + +
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEK 689
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+++ +K+ VSWN ++ Y V G+G A+ +F M ++ + +F + L AC
Sbjct: 690 LFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGL 749
Query: 260 PYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIV 317
EG +I H + K + D + ++ + G ++ G + P E + W +++
Sbjct: 750 VEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 809
Query: 318 SGYAISGRIR---EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ ++ A + ++ RN + + + Y +S W +A R D
Sbjct: 810 GSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGK----ARSKMND- 864
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGF 401
L L G S +++ +VH F
Sbjct: 865 ------LGLKKTPGCSWVELKNKVHAF 885
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 212/740 (28%), Positives = 355/740 (47%), Gaps = 103/740 (13%)
Query: 21 TPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
+P KTL + ++ P ++H+FQ C+ KA+ ++ + ++ P VF+
Sbjct: 22 SPFKTLPISPFSSYQA-TPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVT 80
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-----------FPGR--- 126
N I+ Y KC +L A +FD MP+RD SWNAML Y G PG
Sbjct: 81 NCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCG 140
Query: 127 TLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ELF M G ++ T+A VL+S + + G Q+HGL VK GF +V+ S+L+
Sbjct: 141 VVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALL 200
Query: 186 DAYGK-CMVMTDAR---------------------------------------------- 198
D Y K C+ D R
Sbjct: 201 DMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCN 260
Query: 199 -------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
++F+ + N N S+N I+ Y + G EA+ MF + + + + + A
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX 320
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC+ + EG+Q+HG+ +K + + V ++ +MY KCG L
Sbjct: 321 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL---------------- 364
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
EA +F EM R+ +SWNA++A + ++ ++ L M ++
Sbjct: 365 ---------------VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG 409
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D+ T G +L CAG + G E+H I ++ + FV AL+DMY KCG + A
Sbjct: 410 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAE 469
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANI 490
+++++ VSWNA+++G++ + QSEEA +FS+M + P FT+ T+L CAN+
Sbjct: 470 KLHDRLAEQT-VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 528
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++E GKQIH +I+ + + LV++Y+KC ++ +F+++ + D + N+M+
Sbjct: 529 VTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMV 588
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ + G EAL++F M+ E +KP+H TF +L AC H G V+ L +F SM YG+
Sbjct: 589 CGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL 648
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
PQLEHY C++ + R G + + + + MPF + R + C+ +G + E AA
Sbjct: 649 DPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAY 708
Query: 671 RLNELNPWAPFQFKITTNRF 690
+ +L P + + +N +
Sbjct: 709 SILQLEPEDSAAYVLLSNIY 728
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/563 (28%), Positives = 274/563 (48%), Gaps = 45/563 (7%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+ P +TL + ++ + T++++ + ++ L KQ H ++ F V
Sbjct: 19 QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY--------------LVAGNG 225
+ + L+ Y KC + A ++FD + ++ VSWN ++ Y + G G
Sbjct: 79 VTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138
Query: 226 KEAVVMF-FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
V +F F+M R TFA L +CS L G+QIHG+ +K+ F+ D V +
Sbjct: 139 CGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 198
Query: 285 LTEMYVKCG-RLEDARGLLDQPDE---------------------RNIISWTSIVSGYAI 322
L +MY KC + +D RG L+ E +++ T+ + Y
Sbjct: 199 LLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMK 258
Query: 323 SGRIRE-ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+ + + +LFN +P N+ S+NA++ GY RS EAL L++K+ +D+V+L
Sbjct: 259 CNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSG 318
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
CA + G +VHG ++ SNI V+NA+LDMY KCG L A + F +M R
Sbjct: 319 AXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS-R 377
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
D VSWNA++ + + G E+ ++ F M Q P +FT+ ++L ACA +L G +IH
Sbjct: 378 DAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 437
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+I++ ++ AL+++Y+KC +E A ++ + V+ N++I GF ++
Sbjct: 438 NRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSE 497
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY--E 618
EA + F M + G+ PD+ T+ IL C + V+L Q + K Q + Y
Sbjct: 498 EAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE---LQSDAYISS 554
Query: 619 CMIKLYCRYGYMKELEDFVNRMP 641
++ +Y + G M++ + + P
Sbjct: 555 TLVDMYSKCGNMQDFQLIFEKAP 577
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 180/408 (44%), Gaps = 19/408 (4%)
Query: 1 MAGNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVE 60
M A I++ KTL+ + EP ++ Y + + CA +A+
Sbjct: 374 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT-YGSVLKACAGWQALNC 432
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
++ + ++ F+ I+ Y KCG ++ A L D + E+ SWNA++ ++
Sbjct: 433 GMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 492
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
+ F M GV + TYA +L + A + + + KQ+H I+K+ + +
Sbjct: 493 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYI 552
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
S+LVD Y KC M D + +F+ N++ V+WN +V Y G G+EA+ +F M E++
Sbjct: 553 SSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENV 612
Query: 241 RPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+P + TF L AC + +G+ H ++ + + ++ + G++ A
Sbjct: 613 KPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKAL 672
Query: 300 GLLD-QPDERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRS 354
L++ P E + + W +++S I G + + A + PE + ++ + Y +
Sbjct: 673 ELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSA-AYVLLSNIYANA 731
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+W E +MR L G S I++ EVH F+
Sbjct: 732 GMWNEVTKLRKMMRFNG-----------LKKEPGCSWIEIKSEVHAFL 768
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 330/654 (50%), Gaps = 20/654 (3%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG--SWNA 113
K I + + + L++F + L + I Y G L A L P D G WN+
Sbjct: 39 KTISQVKLIHQKLLSF-GILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ +Y NG + L LF M+ + + T+ V ++ E + + H L + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F NV + ++LV Y +C ++DAR++FD++ + VSWN I+ Y G K A+ MF
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 234 KMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M E RP N T N L C+ L + G Q+H + + + V L +MY KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAML 348
G +++A + ++++SW ++V+GY+ GR +A LF +M E +V++W+A +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF------- 401
+GY + L EAL M + ++VTL +L+ CA + + GKE+H +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYARRGQSE 460
+ +N + V N L+DMY KC + +AR F +S + RD V+W ++ GY++ G +
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 461 EAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVCRG 516
+A+ SEM +TRP+ FT L ACA++++L GKQIH + +RN + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+++Y KC + A VF + + + S++ G+ + G EAL +F M++ G K
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +T +L AC H G + +++F+ M+ +G+ P EHY C++ L R G +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + CR +G LGE+AA ++ EL + + +N +
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 191/462 (41%), Gaps = 89/462 (19%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS ++L VT +F+ N ++ Y KCG +D+A +F M +D SW
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNH----------------------------------- 136
NAM+ Y+Q G + LF M
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIV-------KRGFCGNVILESSLVDAYG 189
SG+ N++T +VL A L K++H + K G ++ + L+D Y
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 190 KCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNF 245
KC + AR MFD + + ++ V+W V++ Y G+ +A+ + +M ED RP F
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
T + AL AC+ L++ G QIH ++ + + + L +MY KCG + DAR + D
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+N ++WTS+++GY + G EA +F+E
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDE----------------------------- 569
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------LL 418
MR+ +D VTL ++L C+ I G E + N + VS L+
Sbjct: 570 --MRRIGFKLDGVTLLVVLYACSHSGMIDQGME-----YFNRMKTVFGVSPGPEHYACLV 622
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
D+ + G L +A +M V W A L+ G+ E
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/594 (32%), Positives = 313/594 (52%), Gaps = 73/594 (12%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A L C SK++ EAR + + ++ + +F+ NR ++ YGKCG L+DAR +FD
Sbjct: 20 SPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDH 79
Query: 103 M-------------------------------PERDGGSWNAMLGAYTQNGFPGRTLELF 131
M PERD SWNAM+ + Q L
Sbjct: 80 MQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFV 139
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+DM+ N+ ++ + L + A ++L + Q+HGLI K + +V + S+LVD Y KC
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC 199
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
V+ A+R FDD+ +N VSWN ++ Y G +A+ +F +M+ I P T A+
Sbjct: 200 RVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVA 259
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNI 310
AC+ LS+ EG+QIH ++K D +D+VLG +L +MY KC R+ +AR + D+ R++
Sbjct: 260 SACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDV 319
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S TS+VSGYA + ++ AR +F+ M ERNV+SWNA++AGYT++ +EA+ L+++
Sbjct: 320 VSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEV------HGFIHRNDYSSNIFVSNALLDMYRKC 424
+ T G +LN CA L+++K+G++ HGF ++ S+IFV N+L+DMY KC
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKC 439
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
G + R+ F +M + RD VSWNA++ GYA+ G EA+ F EM RP T +
Sbjct: 440 GLVEDGRLVFERMLE-RDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGV 498
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+AC++ +E+G+ CY ++ LV V C+ + + + LD
Sbjct: 499 LSACSHAGLVEEGR---------CYFQSMTIEHGLVPVKDHYTCM---VDLLGRAGCLD- 545
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
E L++ ++PD + + +L AC GN+ L
Sbjct: 546 --------------------EANNLIQTMPMEPDAVVWGSLLAACKVHGNITLG 579
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 174/614 (28%), Positives = 299/614 (48%), Gaps = 100/614 (16%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+A +L + + + ++ +H I+K F + +++ LVD YGKC + DAR++FD +Q
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMF-------------------------------FK 234
+N SWN ++ G EA+ +F
Sbjct: 82 QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVD 141
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M ED ++F +AL AC+ L G+QIHG+I K + D + +L +MY KC
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC-- 199
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
R + S A+ F++M RN++SWN+++ Y ++
Sbjct: 200 -------------RVVAS----------------AQRAFDDMDVRNIVSWNSLITCYEQN 230
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFV 413
+AL+ M + D++TL + + CA LS I+ G ++H + ++D Y +++ +
Sbjct: 231 GPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVL 290
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQR------------------------------RDK 443
NAL+DMY KC + AR+ F +M R R+
Sbjct: 291 GNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNV 350
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA++ GY + G++EEA+ F ++ E+ P+ +TF LL ACAN++ L+ G+Q H
Sbjct: 351 VSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTH 410
Query: 503 VIRNCY------EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
++++ + + ++ +L+++Y KC +E VF+ D + N+MI+G+ N
Sbjct: 411 ILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQN 470
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G EALE+F M G +PDH+T G+L AC H G V+ +F SM ++G++P +H
Sbjct: 471 GYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDH 530
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ L R G + E + + MP P + + C+ +G TLG++ A RL E++
Sbjct: 531 YTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEID 590
Query: 677 PWAPFQFKITTNRF 690
P + + +N +
Sbjct: 591 PLNSGPYVLLSNMY 604
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 215/402 (53%), Gaps = 38/402 (9%)
Query: 235 MLREDIRPLNF----TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
++R+ + L+F FA L C S +E +H IIK F + + L ++Y
Sbjct: 6 LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG LEDAR + D +RN SW +++ G + EA LF MPER+ SWNAM++G
Sbjct: 66 KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSG 125
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ + ++EAL FV M +++ + G L+ CAGL ++ +G ++HG I ++ YS +
Sbjct: 126 FAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLD 185
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-M 469
+++ +AL+DMY KC + SA+ F M R+ VSWN+++T Y + G + +A+ F M
Sbjct: 186 VYMGSALVDMYSKCRVVASAQRAFDDMDV-RNIVSWNSLITCYEQNGPAGKALEVFVRMM 244
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCL 528
P + T ++ +ACA++S++ +G QIH V++ + Y ++V ALV++Y KC +
Sbjct: 245 NCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRV 304
Query: 529 EYAIRVFK------------------ESSSL-------------DVIICNSMILGFCHNE 557
A VF ++SS+ +V+ N++I G+ N
Sbjct: 305 NEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNG 364
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
EA+ +F L+K+E I P H TF +L AC + ++KL Q
Sbjct: 365 ENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 52/294 (17%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FY----PTPPVFLLNRAIECYGKCGN 92
P Y+ + +L CA+ + R+ ++++ F+ +F+ N I+ Y KCG
Sbjct: 383 PTHYT-FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGL 441
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR- 151
++D R +F+ M ERD SWNAM+ Y QNG+ LE+F +M SG + +T VL
Sbjct: 442 VEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSA 501
Query: 152 -SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNA 209
S A +E G + ++ G + +VD G+ + +A + + +A
Sbjct: 502 CSHAGLVEEGRC-YFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDA 560
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
V W ++ V GN + ++L +I PLN S PY
Sbjct: 561 VVWGSLLAACKVHGNITLGKYVAERLL--EIDPLN-------------SGPY-------- 597
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII-----SWTSIVS 318
VL L+ MY + GR +D + Q + +I SW SI S
Sbjct: 598 -----------VL--LSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQS 638
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/511 (35%), Positives = 286/511 (55%), Gaps = 7/511 (1%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG--KEAVVMFFK 234
N+ ++L+ AY K + D +R+FD + N + VSWN ++ Y AGNG E+V ++
Sbjct: 70 NLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGY--AGNGLISESVRVYNM 127
Query: 235 MLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
ML++ LN TF+ L S G QIHG I K ++ V L +MY K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+ DA + ++ E+NI+ + ++++G I EA +LF+ MPE++ ISW ++ G T+
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+ L+KEA+D M +DQ T G +L C G + GK++H +I R DY NIFV
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-E 472
+ALLDMY KC N++ A F +M + ++ +SW A+L GY + G SEEA+ F +MQ E
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKM-RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P FT +++++CAN++SLE+G Q H + + V AL+ +Y KC LE+A
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAH 426
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
++F E D + +++ G+ + E + +F M GI PD +TF G+L AC G
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
V+ +F+ M ++ I P +HY CMI L R G ++E ++F+N+MPF+P +
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 653 FDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR NG +G+WAA L++L P P +
Sbjct: 547 LSSCRLNGNLEIGKWAAESLHKLEPQNPASY 577
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 222/463 (47%), Gaps = 65/463 (14%)
Query: 67 NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
N+ P P +F N + Y K G L D + +FD MP D SWN++L Y NG
Sbjct: 61 NVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISE 120
Query: 127 TLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
++ ++ M G V+ N+IT++ +L S+ + + +Q+HG I K G+ + + S LV
Sbjct: 121 SVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLV 180
Query: 186 DAYGKCMVMTDARRMFDDIQNKN-------------------------------AVSWNV 214
D Y K + DA R+F++I KN ++SW
Sbjct: 181 DMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTT 240
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ G KEAV F +M E FTF + L AC + EG QIH II+ D
Sbjct: 241 IITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD 300
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
++ + V +L +MY KC ++ A + + +N+ISWT+++ GY +G EA +F
Sbjct: 301 YQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFC 360
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+M +RN I D TLG +++ CA L+ ++
Sbjct: 361 DM-QRNEIH------------------------------PDDFTLGSVISSCANLASLEE 389
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G + HG + + VSNAL+ +Y KCG+L A F++M + RD+VSW A+++GYA
Sbjct: 390 GAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEM-KIRDEVSWTALVSGYA 448
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+ G++ E ++ F M P TF +L+AC+ +E+G
Sbjct: 449 QFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKG 491
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 218/434 (50%), Gaps = 39/434 (8%)
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++H II+ + + +L Y K G L++AR + D + N+ SW +++S Y+ G
Sbjct: 26 KLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLG 85
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLIL 383
+++ + +F+ MP +V+SWN++L+GY + L E++ + +++ + +++++T +L
Sbjct: 86 YLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTML 145
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--- 440
+ + + +G+++HG I + Y S +FV + L+DMY K G + A F ++ ++
Sbjct: 146 ILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIV 205
Query: 441 ---------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
+D +SW ++TG + G +EA+ F EM E
Sbjct: 206 VYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEG 265
Query: 474 R-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+FTF ++L AC +L++GKQIH ++IR Y+ N+ AL+++Y KC ++YA
Sbjct: 266 FCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAE 325
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
VF++ +VI +M++G+ N EA+ +F M++ I PD T ++ +C +
Sbjct: 326 AVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLA 385
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
+++ QF G+I + +I LY + G ++ + M V +
Sbjct: 386 SLEEGAQFHGQALAS-GLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALV 444
Query: 653 FDKCRKNGYATLGE 666
+GYA G+
Sbjct: 445 ------SGYAQFGK 452
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 188/424 (44%), Gaps = 47/424 (11%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P + + N I +C + +A LFD MPE+D SW ++ TQNG ++ F
Sbjct: 200 PEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFK 259
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M G +Q T+ +VL + L L KQ+H I++ + N+ + S+L+D Y KC
Sbjct: 260 EMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCR 319
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ A +F +++KN +SW ++ Y G +EAV +F M R +I P +FT + +
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVIS 379
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+C+ L+S EG Q HG + V +L +Y KCG LE A L + R+ +S
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
WT++VSGYA G+ E LF M ++
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVP----------------------------- 470
Query: 373 DIDQVTLGLILNVC--AGLSEIKMGKEVHGF-----IHRNDYSSNIFVSNALLDMYRKCG 425
D VT +L+ C AGL E K H F HR + + ++D+ + G
Sbjct: 471 --DGVTFVGVLSACSRAGLVE----KGYHYFECMVKEHRITPIPDHYT--CMIDLLSRAG 522
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE---EAMTSFSEMQWETRPSKFTFET 482
L A+ + QM D + W +L+ G E A S +++ + S +
Sbjct: 523 RLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSS 582
Query: 483 LLAA 486
+ AA
Sbjct: 583 IYAA 586
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 20/364 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C A+ E +++ + ++ +F+ + ++ Y KC N+ A +F +M
Sbjct: 273 FGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMR 332
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW AML Y QNG+ + +F DM + + + T +V+ S A L Q
Sbjct: 333 HKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQ 392
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HG + G V + ++L+ YGKC + A ++F +++ ++ VSW +V Y G
Sbjct: 393 FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGK 452
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---IDFEGDDVV 281
E + +F ML I P TF L ACS +G ++K I D
Sbjct: 453 ANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYT 512
Query: 282 LGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMP 337
+ ++ + GRLE+A+ ++Q P + I W +++S ++G + + A E +++
Sbjct: 513 --CMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE 570
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+N S+ + + Y W D V +RK +++ + G S IK +
Sbjct: 571 PQNPASYILLSSIYAAKGKW----DDVAKLRKGMREMG-------VKKEPGHSWIKYKNK 619
Query: 398 VHGF 401
VH F
Sbjct: 620 VHIF 623
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 193/653 (29%), Positives = 327/653 (50%), Gaps = 33/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ +A + + C+ + ++ + V + ++ Y KC LDDA
Sbjct: 135 PHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFR 194
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F EMPER+ W+A++ Y QN L+LF DM G+ +Q TYA+V RS A
Sbjct: 195 VFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSA 254
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ QLHG +K F + I+ ++ +D Y KC M DA ++F+ + N S+N I+
Sbjct: 255 FKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVG 314
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G +A+ +F + R ++ + + AL ACS + EG+Q+HG+ +K +
Sbjct: 315 YARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFN 374
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V ++ +MY KCG L EA +F EM
Sbjct: 375 ICVANTILDMYGKCGAL-------------------------------MEACLIFEEMER 403
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+ +SWNA++A + ++ + L M ++T + D T G ++ CAG + G E+
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG I ++ + FV +AL+DMY KCG L A ++ + + VSWN++++G++ + Q
Sbjct: 464 HGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARL-EEKTTVSWNSIISGFSSQKQ 522
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
SE A FS+M + P +T+ T+L CAN++++E GKQIH +++ +V
Sbjct: 523 SENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAST 582
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y+KC ++ + +F+++ D + ++MI + ++ G +A+ +F M+ +KP+
Sbjct: 583 LVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPN 642
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H F +L AC H G V L +F M YG+ PQ+EHY CM+ L R G + E +
Sbjct: 643 HTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLI 702
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MPF + R + C+ G + E A L +L+P + + N +
Sbjct: 703 ESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVY 755
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 174/663 (26%), Positives = 309/663 (46%), Gaps = 84/663 (12%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC-------- 90
P ++H+ Q C++ KA+ +++ + ++ P +++ N ++ Y K
Sbjct: 3 PTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFK 62
Query: 91 -----------------------GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
GN+ A+ LFD MPERD SWN++L Y NG ++
Sbjct: 63 VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKS 122
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
+E+F+ M + + T+A +L++ + + G+ Q+H L ++ GF +V+ S+LVD
Sbjct: 123 IEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + DA R+F ++ +N V W+ ++ Y+ E + +F ML+ + T+
Sbjct: 183 YSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
A+ +C+ LS+ G Q+HG +K DF D ++ + +MY KC R+ DA
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDA--------- 293
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
W ++FN +P S+NA++ GY R +ALD +
Sbjct: 294 -----W-----------------KVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSL 331
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
++ D+++L L C+ + G ++HG + NI V+N +LDMY KCG L
Sbjct: 332 QRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAA 486
A + F +M +RRD VSWNA++ + + + + ++ F M T P FT+ +++ A
Sbjct: 392 MEACLIFEEM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA +L G +IH +I++ ++ ALV++Y KC L A ++ +
Sbjct: 451 CAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSW 510
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NS+I GF ++ A F M + GI PD+ T+ +L C + ++L Q +
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQI-L 569
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
K + + ++ +Y + G M++ R +F+K K Y T
Sbjct: 570 KLQLHSDVYIASTLVDMYSKCGNMQD----------------SRLMFEKAPKRDYVT--- 610
Query: 667 WAA 669
W+A
Sbjct: 611 WSA 613
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 181/386 (46%), Gaps = 21/386 (5%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
KTL+ +S + EP ++ Y + + CA +A+ ++ ++ F+ +
Sbjct: 424 KTLSLFVSMLRSTMEPDDFT-YGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSAL 482
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKCG L +A + + E+ SWN+++ ++ F M G+ +
Sbjct: 483 VDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDN 542
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
TYA VL A + + KQ+H I+K +V + S+LVD Y KC M D+R MF+
Sbjct: 543 YTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEK 602
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++ V+W+ ++ Y G G++A+ +F +M +++P + F + L AC+ + +G
Sbjct: 603 APKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKG 662
Query: 264 MQIHGVIIKIDFEGDDVVL---GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
+ H + G D + + ++ + G++ +A L++ P E + + W +++S
Sbjct: 663 L--HYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSN 720
Query: 320 YAISGRIREARELFNEMPERNVISWNA--MLAG-YTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ G + A + FN + + + +A +LA Y +W E V MR K+
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGE----VAKMRSIMKNCK- 775
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFI 402
L G S I++ EVH F+
Sbjct: 776 ------LKKEPGCSWIEVRDEVHTFL 795
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 207/719 (28%), Positives = 351/719 (48%), Gaps = 84/719 (11%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L Q C KA + + + ++++ + FL NR IE Y KC +D +R LFD+MP+
Sbjct: 9 ASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPK 68
Query: 106 RDGGSWNAMLGAY-------------------------------TQNGFPGRTLELFLDM 134
RD +WNA+LGAY T+NGF + L ++ M
Sbjct: 69 RDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRM 128
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ G T A+VL + +++ ++ HG+ +K G N+ + ++L+ Y KC +
Sbjct: 129 SREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCI 188
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA + F D+ N VS+ ++ + EA +F MLR I + + ++ L C
Sbjct: 189 GDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVC 248
Query: 255 S--------------FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
S LSS G Q+H + IK FE D + SL +MY K G ++ A
Sbjct: 249 SRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEM 308
Query: 301 LLDQPDERNIISWTSIVSGYAI-----------------------------------SGR 325
+ E +++SW +++GY SG
Sbjct: 309 IFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGD 368
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
I R++F+ M ++ SWN +L+GY+++ KEA+ M+ + D+ TL +IL+
Sbjct: 369 IEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSS 428
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
AG+ ++ G++VH + + ++I++++ L+ MY KCG + A+ F ++++ D V
Sbjct: 429 LAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAEL-DIVC 487
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN+++ G + +EA T F +M+ + PS+F++ T+L+ CA +SSL QG+Q+H +
Sbjct: 488 WNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIA 547
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R Y + AL+++Y+KC ++ A VF + + N MI G+ N G EA+
Sbjct: 548 REGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVL 607
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
++ M G KPD ITF +L AC H G V ++ F+SM+ ++G+ P ++HY C+I
Sbjct: 608 LYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSL 667
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW--APF 681
R G + E E +++MP + + CR +L AA L L+P AP+
Sbjct: 668 GRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPY 726
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 46/308 (14%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L +L C GK +H + R+ S + F+SN L++ Y KC + ++R F QM
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWETR------------------ 474
+RD +WNA+L Y + + E+A F+EM W T
Sbjct: 68 -KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYY 126
Query: 475 --------PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
P+ FT ++L+AC + +E G++ H I+ + N+ AL+ +Y KC
Sbjct: 127 RMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCR 186
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
C+ AI+ F + + + +M+ G +++ EA +F LM + I D ++ +L
Sbjct: 187 CIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLG 246
Query: 587 AC---------IHEGNVKLAL----QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
C +H+ N L+ Q + K+G L ++ +Y + G M
Sbjct: 247 VCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSA 306
Query: 634 EDFVNRMP 641
E MP
Sbjct: 307 EMIFVNMP 314
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 90/181 (49%), Gaps = 5/181 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +S YA + CA ++ + R++ S + F+ + I+ Y KCG++D AR
Sbjct: 518 PSQFS-YATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARW 576
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE-- 156
+FD M ++ +WN M+ Y QNG + L+ DM SG + IT+ VL + +
Sbjct: 577 VFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGL 636
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVI 215
++ G+ K + + + G V + ++D+ G+ + +A + D + K + + W V+
Sbjct: 637 VDTGI-KIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVL 695
Query: 216 V 216
+
Sbjct: 696 L 696
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 284/510 (55%), Gaps = 4/510 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N++ +SL+ A + ++ D R+F + ++AVS+N ++ + AG A + +L
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 237 RED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
R++ +RP T + + S L G Q+H I+++ F L +MY K G
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+ DAR + D+ + +N++ ++++G + EAR LF + ER+ I+W M+ G T++
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L EALD MR IDQ T G IL C L+ ++ GK++H +I R Y N+FV
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG 315
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-T 473
+AL+DMY KC ++R A F +M ++ +SW A++ GY + G EEA+ FSEMQ +
Sbjct: 316 SALVDMYSKCRSVRLAEAVFRRM-MWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGI 374
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+P FT +++++CAN++SLE+G Q HC + + V ALV +Y KC +E A R
Sbjct: 375 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHR 434
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F E S D + ++++G+ + +E +++F M +G+KPD +TF G+L AC G
Sbjct: 435 LFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGL 494
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V +F SM+ + I+P +HY CMI LY R G++K+ E+F+ +MP P +
Sbjct: 495 VDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLL 554
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQF 683
CR G +G+WAA L +L+P P +
Sbjct: 555 SACRLRGDMEIGKWAAENLLKLDPQNPASY 584
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 215/435 (49%), Gaps = 41/435 (9%)
Query: 266 IHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H +I++ + +L +L Y G L AR + D RN+++ S++S A +G
Sbjct: 32 VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91
Query: 325 RIREARELFNEMPERNVISWNAMLAGYT-RSLLWKEALDFVFLMRKTTK-DIDQVTLGLI 382
+R+ LF +P+R+ +S+NA+LAG++ + A +V L+R ++T+ +
Sbjct: 92 LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS---- 438
+ V + L + +G++VH I R + + F + L+DMY K G + AR F +M
Sbjct: 152 VMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNV 211
Query: 439 --------------------------QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
+ RD ++W ++TG + G EA+ F M+ E
Sbjct: 212 VMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAE 271
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
++TF ++L AC +++LE+GKQIH ++ R CYE NV ALV++Y+KC + A
Sbjct: 272 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLA 331
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
VF+ ++I +MI+G+ N G EA+ VF M+++GIKPD T ++ +C +
Sbjct: 332 EAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANL 391
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
+++ QF + G+ P + ++ LY + G +++ + M F+ V
Sbjct: 392 ASLEEGAQFH-CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 450
Query: 652 IFDKCRKNGYATLGE 666
+ GYA G+
Sbjct: 451 VM------GYAQFGK 459
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 242/521 (46%), Gaps = 91/521 (17%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
++ ++ P P+P+ L ++ + ASS + AR++ +
Sbjct: 35 LILRTLPHPSPTYLLNTLLTAY-------------------ASSGLLPHARRVFDAM--- 72
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
P + N + + G + D LF +P+RD S+NA+L +++ G R +
Sbjct: 73 -PGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAY 131
Query: 132 LDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+ + + +GV ++IT + V+ ++ + + +Q+H I++ GF S LVD Y
Sbjct: 132 VALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYA 191
Query: 190 KCMVMTDARRMFDDIQNKNAV-------------------------------SWNVIVRR 218
K + DARR+FD+++ KN V +W +V
Sbjct: 192 KVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTG 251
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G EA+ +F +M E + +TF + L AC L++ EG QIH I + +E D
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYE-D 310
Query: 279 DVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+V +GS L +MY KC + A + + +NIISWT+++ GY +G EA +F+EM
Sbjct: 311 NVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEM- 369
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+R+ I D TLG +++ CA L+ ++ G +
Sbjct: 370 QRDGIK------------------------------PDDFTLGSVISSCANLASLEEGAQ 399
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
H + + VSNAL+ +Y KCG++ A F +MS D+VSW A++ GYA+ G
Sbjct: 400 FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS-FHDQVSWTALVMGYAQFG 458
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+++E + F +M + +P TF +L+AC+ +++G+
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR 499
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 184/388 (47%), Gaps = 38/388 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I +C + +AR LF+ + ERD +W M+ TQNG L++F M
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV +Q T+ ++L + L KQ+H I + + NV + S+LVD Y KC +
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRL 330
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + KN +SW ++ Y G G+EAV +F +M R+ I+P +FT + + +C+
Sbjct: 331 AEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCAN 390
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+S EG Q H + + V +L +Y KCG +EDA L D+ + +SWT++
Sbjct: 391 LASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTAL 450
Query: 317 VSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
V GYA G+ +E +LF +M + V +++ +L+ +RS L + + M++
Sbjct: 451 VMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQD-- 508
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
H + +D+ + ++D+Y + G L+ A
Sbjct: 509 --------------------------HDIVPLDDHYT------CMIDLYSRSGWLKQAEE 536
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ QM + D W +L+ RG E
Sbjct: 537 FIKQMPRCPDAFGWATLLSACRLRGDME 564
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 12/287 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + A+ E +++ + + VF+ + ++ Y KC ++ A +F M
Sbjct: 280 FGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMM 339
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW AM+ Y QNG + +F +M G+ + T +V+ S A L Q
Sbjct: 340 WKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ 399
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L + G V + ++LV YGKC + DA R+FD++ + VSW +V Y G
Sbjct: 400 FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGK 459
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQIHGVIIKIDFEGD 278
KE + +F KML + ++P TF L ACS S + MQ I+ +D
Sbjct: 460 AKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDH-- 517
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISG 324
+ ++Y + G L+ A + Q P + W +++S + G
Sbjct: 518 ---YTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 317/634 (50%), Gaps = 33/634 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QLCA K+I + R++ S + + L + + Y KCG+L + R +FD++
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E WN M+ Y+ +G G ++ LF M G+ N T++++L+ A + +Q
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGLI K GF + +SL+ Y + A+++FD++ +++ +SWN ++ Y+ G
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG- 283
+ +F KML + T N AC+ + + G +H IK +V
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG L A IR +F M E+ V+S
Sbjct: 393 TLLDMYSKCGDLNSA---------------------------IR----VFERMDEKTVVS 421
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W +M+ GY R L A+ M+ D + ILN CA +K GK VH +I
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
N+ +N FVSNAL DMY KCG+++ A F M +++D +SWN ++ GY + EA+
Sbjct: 482 ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM-KKKDVISWNTMIGGYTKNSLPNEAL 540
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
T F+EMQ E++P T +L ACA++++L++G++IH + +RN Y + A+V++Y
Sbjct: 541 TLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYV 600
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC L A +F + D++ MI G+ + G EA+ F M+ GI+PD ++F
Sbjct: 601 KCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFIS 660
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
IL AC H G + + F+ M+ + I P LEHY CM+ L R G + + F+ MP
Sbjct: 661 ILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIK 720
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR + L E A R+ EL P
Sbjct: 721 PDATIWGALLCGCRIHHDVKLAEKVAERIFELEP 754
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 10/289 (3%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ N + Y KCG++ DA +F M ++D SWN M+G YT+N P L LF +M
Sbjct: 490 FVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRE 549
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ T A +L + A L +++HG ++ G+ + + +++VD Y KC ++ A
Sbjct: 550 S-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLA 608
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R +FD I NK+ VSW V++ Y + G G EA+ F +M I P +F + L+ACS
Sbjct: 609 RSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHS 668
Query: 258 SSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTS 315
EG +I ++ K E + + ++ + G L A + P + + W +
Sbjct: 669 GLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGA 728
Query: 316 IVSGYAISGRIREARE----LFNEMPERNVISWNAMLAG-YTRSLLWKE 359
++ G I ++ A + +F PE + +LA Y + W+E
Sbjct: 729 LLCGCRIHHDVKLAEKVAERIFELEPENT--GYYVLLANIYAEAEKWEE 775
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 329/647 (50%), Gaps = 36/647 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER- 106
L + C SK + + + + +V+ + L I Y C A+ +F +
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQL 165
D WN ++ A T+N LE+F + H + + TY +VL++ + +G K +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++K GF +V++ SS V Y KC V DA ++FD++ ++ SWN ++ Y G
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A+ +F +M +P + T + +C+ L G +IH +++ F D V +L
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG LE A+E+F ++ +NV+SWN
Sbjct: 249 VDMYGKCGCLE-------------------------------MAKEVFEQIQRKNVVSWN 277
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+M+AGY+ K ++ M + TL IL C+ +++GK +HG+I RN
Sbjct: 278 SMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRN 337
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++IFV+++L+D+Y KCGN+ SA F M + + VSWN +++GY + G EA+
Sbjct: 338 RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMISGYVKVGSYLEALVI 396
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F++M+ +P TF ++L AC+ ++ LE+GK+IH F+I + EIN V GAL+++Y K
Sbjct: 397 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAK 456
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C ++ A+ +F + D + SMI + + + EAL++F M++ KPD +TF I
Sbjct: 457 CGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAI 516
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP-FN 643
L AC H G V +F+ M +YG P +EHY C+I L R G ++E + + R P
Sbjct: 517 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIR 576
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V +L +F C + LGE R L E +P P + I +N +
Sbjct: 577 EDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMY 623
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 239/465 (51%), Gaps = 34/465 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H +P +++ Y + + C+ + + + ++++ V +++ A+ Y KC
Sbjct: 98 HFPYLKPDAFT-YPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV 156
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+DA LFDEMPERD SWN ++ Y Q+G P + LELF +M SG + +T V+ S
Sbjct: 157 FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISS 216
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A L+L K++H +V+ GF + + S+LVD YGKC + A+ +F+ IQ KN VSW
Sbjct: 217 CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW 276
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ Y + G+ K + +F +M E IRP T ++ L ACS + G IHG II+
Sbjct: 277 NSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR 336
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
E D V SL ++Y KCG + A + + N++SW ++SGY G EA +
Sbjct: 337 NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVI 396
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F + MRK D +T +L C+ L+ +
Sbjct: 397 FTD-------------------------------MRKAGVKPDAITFTSVLPACSQLAVL 425
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GKE+H FI + N V ALLDMY KCG + A F Q+ + RD VSW +++
Sbjct: 426 EKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE-RDFVSWTSMIAA 484
Query: 453 YARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQG 496
Y GQ+ EA+ F +MQ + +P K TF +L+AC++ +++G
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG 529
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 254/501 (50%), Gaps = 44/501 (8%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L++ + L K +H IV G N+ L SL++ Y C + A+ +F I+N
Sbjct: 8 SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67
Query: 208 NAVS-WNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ WN ++ E + +F ++L ++P FT+ + L ACS L G
Sbjct: 68 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H +IK F D VV+ S MY KC EDA L D+ ER++ SW +++S Y G+
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A ELF EM ++G+ D VTL +++
Sbjct: 188 PEKALELFEEMK----------VSGFKP---------------------DSVTLTTVISS 216
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L +++ GKE+H + R+ ++ + FVS+AL+DMY KCG L A+ F Q+ QR++ VS
Sbjct: 217 CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI-QRKNVVS 275
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN+++ GY+ +G S+ + F M E RP+ T ++L AC+ +L+ GK IH ++I
Sbjct: 276 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYII 335
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
RN E ++ +L+++Y KC + A VF+ +V+ N MI G+ EAL
Sbjct: 336 RNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALV 395
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----CM 620
+F M+K G+KPD ITF +L AC ++ + + + I +LE E +
Sbjct: 396 IFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHN-----FIIESKLEINEVVMGAL 450
Query: 621 IKLYCRYGYMKELEDFVNRMP 641
+ +Y + G + E N++P
Sbjct: 451 LDMYAKCGAVDEALHIFNQLP 471
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 175/370 (47%), Gaps = 30/370 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + I+ Y KCGN+ A +F MP+ + SWN M+ Y + G L +F DM
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+GV + IT+ +VL + ++ L K++H I++ N ++ +L+D Y KC + +
Sbjct: 403 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 462
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ + ++ VSW ++ Y G EA+ +F KM + D +P TF L ACS
Sbjct: 463 ALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSH 522
Query: 257 LSSPYEG-MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW- 313
EG + +I + F+ L ++ + GRL +A +L + PD R +
Sbjct: 523 AGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLL 582
Query: 314 TSIVSGYAISGRIREARELFNEMPERN------VISWNAMLAGYTRSLLWKEALDFVFLM 367
+++ S + ++ ++ + E++ I + M A + W E +
Sbjct: 583 STLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKK---WDE-------V 632
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
RK I + LGL N G S I++GK +H F+ + S+ DM +C ++
Sbjct: 633 RKVRLKIKE--LGLKKN--PGCSWIEVGKRIHPFVVEDK-------SHPQADMIYECMSI 681
Query: 428 RSARIWFYQM 437
++ + YQ+
Sbjct: 682 LASHVEKYQV 691
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D L +L C +K GK +H I +NI + +L+++Y C +SA++
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANIS 491
F + D WN ++ + E + F + +P FT+ ++L AC+ +
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ GK +H VI++ + ++VV + V +Y KC E AI++F E DV N++I
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ + + +ALE+F MK G KPD +T ++ +C
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSC 217
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/653 (28%), Positives = 330/653 (50%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y +++ + C K +L + + + + ++ N + Y + N A
Sbjct: 211 PTPY-VFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEK 269
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F +M +D S+N+++ Q GF LELF M + + +T A++L + A
Sbjct: 270 VFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGA 329
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +QLH ++K G ++I+E +L+D Y C + A MF Q +N V WNV++
Sbjct: 330 LCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVA 389
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ N E+ +F +M + + P FT+ + L C+ + + G QIH +IK F+ +
Sbjct: 390 FGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFN 449
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V L +MY K G+L+ A + + E
Sbjct: 450 VYVCSVLIDMYAKHGKLD-------------------------------TAHVILRTLTE 478
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+V+SW A+++GY + L+ EAL M D + ++ CAG+ + G+++
Sbjct: 479 DDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQI 538
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + + YS ++ + NAL+ +Y +CG ++ A + F ++ + D +SWN +++G+A+ G
Sbjct: 539 HAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLISGFAQSGY 597
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
E+A+ F++M + + S FTF + ++A ANI++++QGKQIH +I+ ++ ++ A
Sbjct: 598 CEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNA 657
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ Y KC +E A R F E + + N+MI G+ + G EA+ +F MK+ G P+
Sbjct: 658 LITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPN 717
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+TF G+L AC H G V L +F+SM ++G++P+ HY C++ L R G++ F+
Sbjct: 718 HVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFI 777
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE+AA+ L EL P + + +N +
Sbjct: 778 EEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMY 830
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/595 (25%), Positives = 291/595 (48%), Gaps = 45/595 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L LC +S ++VE +KL ++ L N+ ++ Y G+LD +F++MP
Sbjct: 13 YIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMP 72
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSK 163
R SW+ ++ + + R L+LF M VS +I++A+VLR+ S + + ++
Sbjct: 73 NRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAE 132
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H I+ G + I+ + L+ Y K ++ AR++FD++ K++VSW ++ + G
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA+ +F +M I P + F++ L C+ + G Q+H ++ K G
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFK---------YG 243
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
S E YV ++V+ Y+ A ++F++M ++ +S
Sbjct: 244 SSLETYV----------------------CNALVTLYSRMPNFVSAEKVFSKMQSKDEVS 281
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+N++++G + AL+ M++ D VT+ +L+ CA + G+++H ++
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ SS++ V ALLD+Y C ++++A F +Q + V WN +L + + E+
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLT-AQTENVVLWNVMLVAFGKLDNLSESF 400
Query: 464 TSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ + P++FT+ ++L C ++ +L+ G+QIH VI+ ++ NV L+++Y
Sbjct: 401 RIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMY 460
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
K L+ A + + + DV+ ++I G+ + EAL+ F M GI+ D+I F
Sbjct: 461 AKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFS 520
Query: 583 GILLAC-----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ AC +++G A + G L ++ LY R G +KE
Sbjct: 521 SAISACAGIQALNQGRQIHAQSYVS------GYSEDLSIGNALVSLYARCGRIKE 569
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 246/502 (49%), Gaps = 41/502 (8%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M H G+ AN TY +L L K+LHG I+K GF +L + LVD Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ ++F+D+ N++ SW+ I+ ++ + +F M+ E++ P +FA+ L A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 254 CSF--LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
CS + Y QIH II ++ L +Y K G + AR + D ++ +
Sbjct: 121 CSGHRIGIRY-AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW +++SG++ +G EA LF EM + +VF
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIF-----------------PTPYVF------ 216
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+L+ C + +G+++H + + S +V NAL+ +Y + N SA
Sbjct: 217 --------SSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAE 268
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F +M Q +D+VS+N++++G A++G S+ A+ F++M+ + +P T +LL+ACA+
Sbjct: 269 KVFSKM-QSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASN 327
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+L +G+Q+H +VI+ +++ GAL+++Y C ++ A +F + + +V++ N M+
Sbjct: 328 GALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVML 387
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
+ F + E+ +F M+ +G+ P+ T+ IL C G + L Q + K G
Sbjct: 388 VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQV-IKTGF 446
Query: 611 IPQLEHYEC--MIKLYCRYGYM 630
Q Y C +I +Y ++G +
Sbjct: 447 --QFNVYVCSVLIDMYAKHGKL 466
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 309/592 (52%), Gaps = 33/592 (5%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y KC LDD+ +F E+PE++ SW+AM+ QN LELF +M GV +Q Y
Sbjct: 226 YAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIY 285
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++ RS A L + K+LH +K F ++I+ ++ +D Y KC M DA+++ +
Sbjct: 286 ASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPK 345
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+ S+N I+ Y + G +A+ F +L+ + T + AL AC+ + EG Q+
Sbjct: 346 CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+ +K + V ++ +MY KC L
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALA------------------------------ 435
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA +LF+ M R+ +SWNA++A ++ +E L M + + D T G +L C
Sbjct: 436 -EASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKAC 494
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
AG + G E+H I ++ + FV AL+DMY KCG + A + ++++ VSW
Sbjct: 495 AGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKAD-KIHDRTEQKTMVSW 553
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
NA+++G++ QSE+A FS M + P FT+ +L CAN++++ GKQIH +I+
Sbjct: 554 NAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIK 613
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ +V LV++Y+KC ++ + +F+++ + D + N+M+ G+ H+ G EAL++
Sbjct: 614 QELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKL 673
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M+ +KP+H TF +L AC H G V L +FD M +YG+ PQ EHY CM+ +
Sbjct: 674 FESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILG 733
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + E + V +MPF + R + C+ +G + E A R L +L+P
Sbjct: 734 RSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDP 785
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 190/670 (28%), Positives = 324/670 (48%), Gaps = 85/670 (12%)
Query: 12 ILSKSSPKPTPS-KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLV- 69
+ K P PT + TL + ++ P ++H++Q C+ ++ ++ + ++
Sbjct: 23 LFKKIPPIPTNNFSTLAQN-----QTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIF 77
Query: 70 -TFYPTP-----------------------------PVFLLNRAIECYGKCGNLDDARGL 99
F PT V N I Y CG +D AR
Sbjct: 78 CGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKF 137
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEEL 157
F EMPERD SWN+++ + QNG +++++FL+M GV ++ + A VL++ + EE
Sbjct: 138 FYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEEC 197
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++GV Q+HGL+VK GF +V+ S+L+ Y KC + D+ +F ++ KN VSW+ ++
Sbjct: 198 DMGV--QVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIA 255
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ E + +F +M + +A+ +C+ LS+ G ++H +K F G
Sbjct: 256 GCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAF-G 314
Query: 278 DDVVLGSLT-EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D+++G+ T +MY KCGR+ DA+ +L + ++ S+ +I+ GYA S R +A + F
Sbjct: 315 SDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQ-- 372
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
LL K L F D++TL LN CA + G+
Sbjct: 373 ------------------LLLKTGLGF-----------DEITLSGALNACASIRGDLEGR 403
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+VHG ++ SNI V+NA+LDMY KC L A F M +RRD VSWNA++ +
Sbjct: 404 QVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLF-DMMERRDAVSWNAIIAACEQN 462
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G EE + F+ M P FT+ ++L ACA +L G +IH +I++ +
Sbjct: 463 GNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG 522
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
ALV++Y KC +E A ++ + ++ N++I GF ++ +A + F M + G+
Sbjct: 523 AALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVN 582
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH--YEC--MIKLYCRYGYMK 631
PD+ T+ +L C + V L Q + I +L+ Y C ++ +Y + G M+
Sbjct: 583 PDNFTYAAVLDTCANLATVGLGKQIHAQI-----IKQELQSDVYICSTLVDMYSKCGNMQ 637
Query: 632 ELEDFVNRMP 641
+ + + P
Sbjct: 638 DSQLMFEKAP 647
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 159/303 (52%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS + +E R++ V + + N ++ YGKC L +A LFD M RD SW
Sbjct: 393 CASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSW 452
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA++ A QNG TL F M HS + + TY +VL++ A L ++H I+K
Sbjct: 453 NAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIK 512
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + ++LVD Y KC ++ A ++ D + K VSWN I+ + + ++A
Sbjct: 513 SGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKF 572
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +ML + P NFT+A L C+ L++ G QIH IIK + + D + +L +MY K
Sbjct: 573 FSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSK 632
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG ++D++ + ++ R+ ++W +++ GYA G EA +LF M NV +A
Sbjct: 633 CGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSV 692
Query: 352 TRS 354
R+
Sbjct: 693 LRA 695
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 177/372 (47%), Gaps = 21/372 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP ++ Y + + CA +A+ ++ + ++ F+ ++ Y KCG ++ A
Sbjct: 481 EPDDFT-YGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKAD 539
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ D ++ SWNA++ ++ + F M GV+ + TYA VL + A
Sbjct: 540 KIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLA 599
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+G+ KQ+H I+K+ +V + S+LVD Y KC M D++ MF+ N++ V+WN ++
Sbjct: 600 TVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLC 659
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFE 276
Y G G+EA+ +F M +++P + TF + L AC+ + +G+ V++ + +
Sbjct: 660 GYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLD 719
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREA----RE 331
+ ++ + GR+++A L+ + P E + + W +++S I G + A R
Sbjct: 720 PQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRA 779
Query: 332 LFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
L P+ + S +L+ Y + +W + +MR L G S
Sbjct: 780 LLQLDPQDS--SACVLLSNIYADAGMWGNVSEMRKMMRHNK-----------LKKEPGCS 826
Query: 391 EIKMGKEVHGFI 402
I++ EVH F+
Sbjct: 827 WIELKDEVHAFL 838
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 320/647 (49%), Gaps = 33/647 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA + C+ + +++ + + +F+ + ++ Y KCG + A +F MP
Sbjct: 232 YATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP 291
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+++ SWNA+L + Q G + L LF M S ++ ++ T + VL+ A L +
Sbjct: 292 KQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQI 351
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L ++ G + + LVD Y KC + DA ++F I++ + VSW+ I+ G
Sbjct: 352 VHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQ 411
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA +F +M + P FT A+ + A + L Y G IH + K FE D+ V +
Sbjct: 412 SREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNA 471
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+K G ++D +F R++ISW
Sbjct: 472 LVTMYMKIGSVQDGC-------------------------------RVFEATTNRDLISW 500
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA+L+G+ + L M + + T IL C+ LS++ +GK+VH I +
Sbjct: 501 NALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK 560
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N N FV AL+DMY K L A F ++ +RD +W ++ GYA+ GQ E+A+
Sbjct: 561 NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRDLFAWTVIVAGYAQDGQGEKAVK 619
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +MQ E +P++FT + L+ C+ I++L+ G+Q+H I+ ++ ALV++Y
Sbjct: 620 CFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYA 679
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC C+E A VF S D + N++I G+ + +G +AL+ F M EG PD +TF G
Sbjct: 680 KCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIG 739
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G ++ + F+S+ YGI P +EHY CM+ + R G E+E F+ M
Sbjct: 740 VLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 799
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V + + C+ +G GE AA +L EL P + + +N F
Sbjct: 800 SNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 846
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/628 (26%), Positives = 304/628 (48%), Gaps = 41/628 (6%)
Query: 14 SKSSPKPTPSKTLTKTISGH-----LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNL 68
S + P TP + +T+ L D Y+ + + CAS + E + + +
Sbjct: 95 SPNRPNSTPGNKIPETVEKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQV 154
Query: 69 VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTL 128
+ P L N + Y KCG+ + A +F E+PERD SW A++ + G+ +
Sbjct: 155 IKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAV 214
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
LF +M GV AN+ TYA L++ + L+L KQ+H +K G ++ + S+LVD Y
Sbjct: 215 NLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLY 274
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
KC M A R+F + +NAVSWN ++ + G+ ++ + +F +M +I FT +
Sbjct: 275 AKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLS 334
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L C+ + G +H + I+I E D+ + L +MY KCG DA + + ++
Sbjct: 335 TVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDP 394
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+++SW++I++ G+ REA E+F M VI
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP------------------------- 429
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+Q TL +++ L ++ G+ +H + + + + V NAL+ MY K G+++
Sbjct: 430 ------NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ 483
Query: 429 SA-RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAA 486
R+ ++ + RD +SWNA+L+G+ + + F++M E P+ +TF ++L +
Sbjct: 484 DGCRV--FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRS 541
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C+++S ++ GKQ+H +++N + N ALV++Y K LE A +F D+
Sbjct: 542 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 601
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
++ G+ + +G +A++ F M++EG+KP+ T L C + Q SM
Sbjct: 602 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH-SMAI 660
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELE 634
K G + ++ +Y + G +++ E
Sbjct: 661 KAGQSGDMFVASALVDMYAKCGCVEDAE 688
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 185/415 (44%), Gaps = 45/415 (10%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y K G++ D +F+ RD SWNA+L + N L +F M G +
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFN 529
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T+ ++LRS + ++ + KQ+H IVK GN + ++LVD Y K + DA +
Sbjct: 530 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 589
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+ + ++ +W VIV Y G G++AV F +M RE ++P FT A++L CS +++
Sbjct: 590 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 649
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G Q+H + IK GD V +L +MY KCG +EDA + D R+ +SW +I+ GY
Sbjct: 650 DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGY 709
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ G+ +A + F M + + D+VT
Sbjct: 710 SQHGQGGKALKAFEAMLDEGTVP-------------------------------DEVTFI 738
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWF 434
+L+ C+ + I+ GK+ H N S ++ ++D+ + G +
Sbjct: 739 GVLSACSHMGLIEEGKK-----HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 793
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTFETLLAA 486
+M + + W VL G E A E++ E + + AA
Sbjct: 794 EEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAA 848
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 179/394 (45%), Gaps = 35/394 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + C+S + +++ + +V F+ ++ Y K L+DA +F+ +
Sbjct: 535 FISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI 594
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD +W ++ Y Q+G + ++ F+ M GV N+ T A+ L + L +Q
Sbjct: 595 KRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ 654
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH + +K G G++ + S+LVD Y KC + DA +FD + +++ VSWN I+ Y G
Sbjct: 655 LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQ 714
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEG 277
G +A+ F ML E P TF L ACS + EG +I+G+ I+
Sbjct: 715 GGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH-- 772
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGRI----REAREL 332
+ ++ + G+ + +++ N++ W +++ + G I R A +L
Sbjct: 773 ----YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL 828
Query: 333 FNEMPE--RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
F PE N I + M A +W + + LM +T+ + + G S
Sbjct: 829 FELEPEIDSNYILLSNMFAAKG---MWDDVTNVRALM--STRGVKKE---------PGCS 874
Query: 391 EIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRK 423
+++ +VH F+ H + + L D+++K
Sbjct: 875 WVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQK 908
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 322/649 (49%), Gaps = 36/649 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + C S + +K+ S ++ + N + YGKCG+L AR +F +
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS 190
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD S+N MLG Y Q + L LF M+ G+S +++TY N+L + L K+
Sbjct: 191 PRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L V+ G ++ + ++LV +C + A++ F I +++ V +N ++ G+
Sbjct: 251 IHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGH 310
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG- 283
EA +++M + + T+ + L ACS + G IH I + D DV +G
Sbjct: 311 NVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE-DGHSSDVQIGN 369
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY +CG L +ARELF MP+R++IS
Sbjct: 370 ALISMYARCGDLP-------------------------------KARELFYTMPKRDLIS 398
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNA++AGY R EA+ M+ +VT +L+ CA S GK +H I
Sbjct: 399 WNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R+ SN ++NAL++MYR+CG+L A+ F + +Q RD +SWN+++ G+A+ G E A
Sbjct: 459 RSGIKSNGHLANALMNMYRRCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETAY 517
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EMQ E P TF ++L+ C N +LE GKQIH + + +++V AL+ +Y
Sbjct: 518 KLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMY 577
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK-PDHITF 581
+C L+ A VF DV+ +MI G +A+E+F M+ EG + PD TF
Sbjct: 578 IRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTF 637
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
IL AC H G V Q F SM +YG++P +EHY C++ L R +E E +N+MP
Sbjct: 638 TSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMP 697
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F P + + CR +G L E AA +LN P + + +N +
Sbjct: 698 FPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVY 746
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 309/599 (51%), Gaps = 34/599 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y L Q C + + EA+++ + +V P +FL N I Y KC ++ DA +F E
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP RD SWN+++ Y Q GF + +LF +M ++G N+ITY ++L + EL
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++H I+K G+ + +++SL+ YGKC + AR++F I ++ VS+N ++ Y
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
KE + +F +M E I P T+ N L A + S EG +IH + ++ D V
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L M V+CG ++ A ++ F + +R+V+
Sbjct: 268 TALVTMCVRCGDVDSA-------------------------------KQAFKGIADRDVV 296
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+NA++A + EA + + MR +++ T ILN C+ ++ GK +H I
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ +SS++ + NAL+ MY +CG+L AR FY M +RD +SWNA++ GYARR EA
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYARREDRGEA 415
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
M + +MQ E +P + TF LL+ACAN S+ GK IH ++R+ + N AL+ +
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNM 475
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y +C L A VF+ + + DVI NSMI G + A ++F M+ E ++PD+ITF
Sbjct: 476 YRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITF 535
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L C + ++L Q + + G+ + +I +Y R G +++ + + +
Sbjct: 536 ASVLSGCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 216/448 (48%), Gaps = 33/448 (7%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
++ TY +L++ + L +K++H +V+ G ++ L + L++ Y KC + DA ++F
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
++ ++ +SWN ++ Y G K+A +F +M P T+ + L AC +
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +IH IIK ++ D V SL MY KCG L AR + R+++S+ +++ YA
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
++E LF +M + D+VT
Sbjct: 206 QKAYVKECLGLFGQMSSEGI-------------------------------SPDKVTYIN 234
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L+ S + GK +H +S+I V AL+ M +CG++ SA+ F ++ R
Sbjct: 235 LLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIAD-R 293
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
D V +NA++ A+ G + EA + M+ + ++ T+ ++L AC+ +LE GK IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ + + +V AL+ +Y +C L A +F D+I N++I G+ E
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLAC 588
EA+ ++ M+ EG+KP +TF +L AC
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSAC 441
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ D+ T +L C + K +H + +IF+SN L++MY KC ++ A
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANIS 491
F +M RRD +SWN++++ YA++G ++A F EMQ P+K T+ ++L AC + +
Sbjct: 84 VFKEMP-RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
LE GK+IH +I+ Y+ + + +L+ +Y KC L A +VF S DV+ N+M+
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+ +E L +FG M EGI PD +T+ +L A
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDA 238
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 30/205 (14%)
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
T + T+ LL C L + K+IH ++ ++ L+ +Y KC + A
Sbjct: 23 TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC---- 588
+VFKE DVI NS+I + ++A ++F M+ G P+ IT+ IL AC
Sbjct: 83 QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142
Query: 589 -------IHEGNVKLALQ-------FFDSMRCKYGIIPQLEH------------YECMIK 622
IH +K Q SM K G +P+ Y M+
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVP 647
LY + Y+KE +M P
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISP 227
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 332/640 (51%), Gaps = 34/640 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ + ++ + C K++ + + + VF+ + I+ Y + G+L DA+
Sbjct: 56 PDKYT-FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQY 114
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD +P++D WN ML Y +NG G +++FL+M HS + N +T+A VL A E
Sbjct: 115 LFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAM 174
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + QLHG+ V G + + ++L+ Y KC + AR++FD + VSWN I+
Sbjct: 175 LDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISG 234
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G EA +F M+ I+P + TFA+ L + L S +IHG II+ D
Sbjct: 235 YVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLD 294
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L ++Y KC +E A+ +L Q + + T+++SGY ++G+ +EA E F + +
Sbjct: 295 VFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ 354
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
M+ T+ VT I AGL+ + +GKE+
Sbjct: 355 ER--------------------------MKPTS-----VTFSSIFPAFAGLAALNLGKEL 383
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG I + V +A+LDMY KCG L A F +++++ D + WN+++T ++ G+
Sbjct: 384 HGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCSQNGR 442
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA+ F +M E TR + L+ACAN+ +L GK+IH +I+ ++ +
Sbjct: 443 PGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS 502
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y KC L ++ RVF + + NS+I + ++ +E L +F M + GI+PD
Sbjct: 503 LIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPD 562
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+TF GI+ AC H G V ++++ M +YGI ++EHY C+ ++ R G + E + +
Sbjct: 563 HVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETI 622
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
N MPF P + + C +G L E A++ L +L+P
Sbjct: 623 NSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDP 662
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 252/503 (50%), Gaps = 33/503 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y + G+L DA+ LF + +WN M+ +T G L +L M +GVS ++ T+
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
V+++ + + K +H + G +V + SSL+ Y + ++DA+ +FD+I
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K++V WNV++ Y+ G+ A+ +F +M +I+P + TFA L C+ + G Q+
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+ + E D V +L MY KC L+ AR L D + +++SW I+SGY +G +
Sbjct: 182 HGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLM 241
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA LF R +IS AG D +T L
Sbjct: 242 GEAEHLF-----RGMIS-----AGIKP---------------------DSITFASFLPCV 270
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
L +K KE+HG+I R+ ++F+ +AL+D+Y KC ++ A+ Q S D V
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQ-SSSFDTVVC 329
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+++GY G+++EA+ +F + Q +P+ TF ++ A A +++L GK++H +I+
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ A++++Y KC L+ A RVF + D I NSMI N R EA+ +
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449
Query: 566 FGLMKKEGIKPDHITFHGILLAC 588
F M EG + D ++ G L AC
Sbjct: 450 FRQMGMEGTRYDCVSISGALSAC 472
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 143/273 (52%), Gaps = 3/273 (1%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y +G +++A+ LF + +WN M+ G+T + AL F M D+ T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ C GL +KMGK VH ++ ++FV ++L+ +Y + G+L A+ F + Q
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQ 498
+D V WN +L GY + G S A+ F EM+ E +P+ TF +L+ CA+ + L+ G Q
Sbjct: 122 -KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H + E++ L+ +Y+KC CL+ A ++F S D++ N +I G+ N
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
EA +F M GIKPD ITF L C++E
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFAS-FLPCVNE 272
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY + G+L+ A+ FY + Q +WN ++ G+ GQ A+ + +M P K+
Sbjct: 1 MYVRTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKY 59
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF ++ AC + S++ GK +H V + +V +L+++Y + L A +F
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
D ++ N M+ G+ N A+++F M+ IKP+ +TF +L C E + L
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 599 QF 600
Q
Sbjct: 180 QL 181
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 297/531 (55%), Gaps = 4/531 (0%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD--AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
KQ+H I+K G + S L++ A + ++ A +F+ I+ N WN ++R
Sbjct: 46 KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
++ + A+V F +M+ + P ++TF L +C+ L+S +EG QIH ++K+ F D
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ SL MY + G + +A+ + DQ + R+ IS+T++++GYA+ G + AR+LF+EMP ++
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V+SWNAM+AGY + KEAL MRK ++ T+ +L+ CA + + +G +
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+I SN+ + NAL+DMY KCG+L++AR F M + RD +SWN ++ GY +
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLE-RDVISWNVMIGGYTHMCSYK 344
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ F EM P++ TF ++L +CA++ +++ GK IH ++ +N ++ +L+
Sbjct: 345 EALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLI 404
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC + A +VF + N+MI G + + +A E+F M +GI+P+ I
Sbjct: 405 DLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEI 464
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF GIL AC H G V L QFF SM Y I P+ +HY CMI L R G +E E +
Sbjct: 465 TFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQN 524
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
M P + + CR +G LGE A RL EL P P + + +N +
Sbjct: 525 MEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIY 575
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 158/600 (26%), Positives = 282/600 (47%), Gaps = 74/600 (12%)
Query: 34 LKSDEPVSYSLYAH-LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE--CYGKC 90
L S +P L H +L + ++I +++ ++++ +F L++ IE +
Sbjct: 17 LPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRS 76
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G++ A LF+ + E + WN+M+ + + P L F+ M +SGV N T+ +L
Sbjct: 77 GDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-------------- 196
+S A+ KQ+H ++K GF +V + +SL++ Y + M +
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAI 196
Query: 197 -----------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
AR++FD++ K+ VSWN ++ Y G KEA+++F M + +
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN 256
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ P T + L AC+ ++ G + I + ++ +L +MY KCG L+ AR
Sbjct: 257 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAR 316
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L D ER++ISW ++ GY +EA LF EM V E
Sbjct: 317 ELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGV-----------------E 359
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
+ FL IL CA L I +GK +H +I++N S + +S +L+D
Sbjct: 360 PTEITFLS--------------ILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLID 405
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
+Y KCGN+ +AR F M + + SWNA++ G A GQ+++A FS+M + P++
Sbjct: 406 LYAKCGNIVAARQVFDGM-KIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEI 464
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFK 536
TF +L+AC + ++ G+Q ++++ Y+I+ + G ++++ + E A + +
Sbjct: 465 TFVGILSACKHAGLVDLGQQFFSSMVQD-YKISPKSQHYGCMIDLLGRAGLFEEAESLLQ 523
Query: 537 E-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
D I S+ LG C + GR L + ++PD+ + +LL+ I+ G K
Sbjct: 524 NMEVKPDGAIWGSL-LGAC-RDHGRVELGELVAERLFELEPDNPGAY-VLLSNIYAGAGK 580
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 297/549 (54%), Gaps = 34/549 (6%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+K++H I+K + L ++LV AY K +T ARR+FD + +N SWN ++ Y
Sbjct: 28 TKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSK 87
Query: 222 AGNGKEAVVMFFKM--------------------LREDIRPLNFTFAN--------ALFA 253
E +F M L + ++ N N AL
Sbjct: 88 LACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALST 147
Query: 254 CSFLSSP----YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L+S + G+Q+HG ++K F+ V L +MY K G + AR D+ E+N
Sbjct: 148 MLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKN 207
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++ + ++++G RI ++R+LF +M E++ ISW AM+AG+T++ L +EA+D MR
Sbjct: 208 VVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRL 267
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
++DQ T G +L C G+ ++ GK+VH +I R DY NIFV +AL+DMY KC +++S
Sbjct: 268 ENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKS 327
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A F +M+ ++ VSW A+L GY + G SEEA+ F +MQ P FT +++++CA
Sbjct: 328 AETVFRKMNC-KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCA 386
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
N++SLE+G Q HC + + + ALV +Y KC +E + R+F E S +D + +
Sbjct: 387 NLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTA 446
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
++ G+ + E L +F M G KPD +TF G+L AC G V+ Q F+SM ++
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEH 506
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
IIP +HY CMI L+ R G ++E F+N+MPF+P + CR + +G+WA
Sbjct: 507 RIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWA 566
Query: 669 ARRLNELNP 677
A L +L P
Sbjct: 567 AESLLKLEP 575
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 244/512 (47%), Gaps = 96/512 (18%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER----- 106
C K + +K+ +++ + P +FLLN + Y K + AR +FD+MP+R
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 107 --------------------------DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
D SWN+++ AY GF ++++ + M ++G
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK--------- 190
+ N+I + +L ++++ + + Q+HG +VK GF V + S LVD Y K
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 191 ----------------------CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
C + D+R++F D+Q K+++SW ++ + G +EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F +M E++ +TF + L AC + + EG Q+H II+ D++ + V +L +M
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KC ++ A + + + +N++SWT+++ GY +G EA ++F +M +
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGI------- 371
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
+ D TLG +++ CA L+ ++ G + H +
Sbjct: 372 ------------------------EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 407
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
S I VSNAL+ +Y KCG++ + F +MS D+VSW A+++GYA+ G++ E + F
Sbjct: 408 SFITVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVSGYAQFGKANETLRLFES 466
Query: 469 MQWET-RPSKFTFETLLAACANISSLEQGKQI 499
M +P K TF +L+AC+ +++G QI
Sbjct: 467 MLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 222/449 (49%), Gaps = 47/449 (10%)
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C L + +IH IIK + +L +L Y K R+ AR + DQ +RN+ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT-RSLLWKEALDFVFLMRKTTK 372
+++S Y+ + E +F+ MP R+++SWN++++ Y R L + + ++
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK--------- 423
+++++ L +L + + + +G +VHG + + + S +FV + L+DMY K
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 424 ----------------------CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
C + +R FY M Q +D +SW A++ G+ + G E
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDM-QEKDSISWTAMIAGFTQNGLDRE 257
Query: 462 AMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F EM+ E ++TF ++L AC + +L++GKQ+H ++IR Y+ N+ ALV+
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVD 317
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC ++ A VF++ + +V+ +M++G+ N EA+++F M+ GI+PD T
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFT 377
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKY---GIIPQLEHYECMIKLYCRYGYMKELEDFV 637
++ +C + +++ QF C+ G+I + ++ LY + G +++
Sbjct: 378 LGSVISSCANLASLEEGAQF----HCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLF 433
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+ M + V + +GYA G+
Sbjct: 434 SEMSYVDEVSWTALV------SGYAQFGK 456
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 169/379 (44%), Gaps = 25/379 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C A+ E +++ + ++ +F+ + ++ Y KC ++ A +F +M
Sbjct: 277 FGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMN 336
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW AML Y QNG+ +++F DM ++G+ + T +V+ S A L Q
Sbjct: 337 CKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQ 396
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H + G + + ++LV YGKC + D+ R+F ++ + VSW +V Y G
Sbjct: 397 FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGK 456
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK----IDFEGDDV 280
E + +F ML +P TF L ACS +G QI +IK I E
Sbjct: 457 ANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDH-- 514
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEM 336
+ +++ + GRLE+AR +++ P + I W S++S + + A E ++
Sbjct: 515 -YTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKL 573
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
N S+ + + Y W+E + +RK +D L G S IK
Sbjct: 574 EPHNTASYILLSSIYAAKGKWEEVAN----LRKGMRDKG-------LRKEPGCSWIKYKN 622
Query: 397 EVHGFI---HRNDYSSNIF 412
+VH F N +S I+
Sbjct: 623 QVHIFSADDQSNPFSDQIY 641
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 111/274 (40%), Gaps = 63/274 (22%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
++ L + C L + K++H I + + IF+ N L+ Y K + AR F QM
Sbjct: 11 SMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQM 70
Query: 438 SQR------------------------------RDKVSWNAVLTGYARRGQSEEAMTSFS 467
QR RD VSWN++++ YA RG +++ +++
Sbjct: 71 PQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN 130
Query: 468 EMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK- 524
M + ++ T+L + + G Q+H V++ ++ V LV++Y+K
Sbjct: 131 LMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKT 190
Query: 525 ------------------------------CCCLEYAIRVFKESSSLDVIICNSMILGFC 554
C +E + ++F + D I +MI GF
Sbjct: 191 GLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFT 250
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N REA+++F M+ E ++ D TF +L AC
Sbjct: 251 QNGLDREAIDLFREMRLENLEMDQYTFGSVLTAC 284
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 339/658 (51%), Gaps = 34/658 (5%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
H + P S++ + ++ + CA+ AI R + T +F+ + I+ Y G
Sbjct: 137 AHPSAPLPDSHT-FPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGG 195
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
L DAR +FD M ERD WN M+ Y + G +ELF DM SG N T A L
Sbjct: 196 LLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLS 255
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SA E +L QLH L VK G V + ++LV Y KC + D ++F + + V+
Sbjct: 256 VSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVT 315
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ + G +A+++F M + IRP + T + L A + L+ +G ++HG I+
Sbjct: 316 WNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIV 375
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ D ++ +L ++Y KC + A+ + D +++ ++++SGY ++G +EA +
Sbjct: 376 RNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVK 435
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F + E+ + + V + +L CA ++
Sbjct: 436 MFRYLLEQGIRP-------------------------------NAVAIASVLPACASMAA 464
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+K+G+E+H + +N Y +V +AL+DMY KCG L + F ++S + D+V+WN++++
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMIS 523
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+A+ G+ EEA+ F EM E + S T ++L+ACA++ ++ GK+IH VI+
Sbjct: 524 SFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRA 583
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ AL+++Y KC LE+A RVF+ + + NS+I + +E++ + M+
Sbjct: 584 DLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQ 643
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG K DH+TF ++ AC H G V+ L+ F M +Y I P++EH+ CM+ LY R G +
Sbjct: 644 EEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKL 703
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ + + MPF P + + CR + L E A++ L +L+P + + +N
Sbjct: 704 DKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSN 761
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 247/516 (47%), Gaps = 38/516 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGG---SWNAMLGAYTQNGFPGRTLELFLDM- 134
L R + Y DA +F +P WN ++ T G L +L M
Sbjct: 77 LQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMW 136
Query: 135 -NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
+ S + T+ V++S A + + + +H G G++ + S+L+ Y +
Sbjct: 137 AHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGL 196
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DAR++FD + ++ V WNV++ Y+ AG+ AV +F M P T A L
Sbjct: 197 LWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSV 256
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
+ S + G+Q+H + +K E + V +L MY KC L+D W
Sbjct: 257 SATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG--------------W 302
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+LF MP ++++WN M++G ++ +AL M+K+
Sbjct: 303 -----------------KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIR 345
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D VTL +L L+ GKE+HG+I RN ++F+ +AL+D+Y KC +R A+
Sbjct: 346 PDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS- 404
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISS 492
Y S+ D V + +++GY G S+EA+ F ++ RP+ ++L ACA++++
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++ G+++H + ++N YE AL+++Y KC L+ + +F + S+ D + NSMI
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISS 524
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
F N EAL +F M EG+K ++T +L AC
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC 560
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 121/287 (42%), Gaps = 10/287 (3%)
Query: 382 ILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L C S + +G +VHG + ++++ + L+ MY R A F + +
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 441 RDK--VSWNAVLTGYARRGQSEEAMTSFSEMQWE----TRPSKFTFETLLAACANISSLE 494
+ WN ++ G G A+ + +M W P TF ++ +CA + ++
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+ +H + ++ AL+++Y L A +VF + D ++ N M+ G+
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
A+E+FG M+ G +P+ T L E ++ +Q ++ KYG+ ++
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQ-LHTLAVKYGLESEV 282
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
++ +Y + + + MP + V + C +NG+
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLV-TWNGMISGCVQNGF 328
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 339/658 (51%), Gaps = 34/658 (5%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
H + P S++ + ++ + CA+ AI R + T +F+ + I+ Y G
Sbjct: 137 AHPSAPLPDSHT-FPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGG 195
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
L DAR +FD M ERD WN M+ Y + G +ELF DM SG N T A L
Sbjct: 196 LLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLS 255
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SA E +L QLH L VK G V + ++LV Y KC + D ++F + + V+
Sbjct: 256 VSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVT 315
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ + G +A+++F M + IRP + T + L A + L+ +G ++HG I+
Sbjct: 316 WNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIV 375
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ D ++ +L ++Y KC + A+ + D +++ ++++SGY ++G +EA +
Sbjct: 376 RNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVK 435
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F + E+ + + V + +L CA ++
Sbjct: 436 MFRYLLEQGIRP-------------------------------NAVAIASVLPACASMAA 464
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+K+G+E+H + +N Y +V +AL+DMY KCG L + F ++S + D+V+WN++++
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMIS 523
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+A+ G+ EEA+ F EM E + S T ++L+ACA++ ++ GK+IH VI+
Sbjct: 524 SFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRA 583
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ AL+++Y KC LE+A RVF+ + + NS+I + +E++ + M+
Sbjct: 584 DLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQ 643
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG K DH+TF ++ AC H G V+ L+ F M +Y I P++EH+ CM+ LY R G +
Sbjct: 644 EEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKL 703
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ + + MPF P + + CR + L E A++ L +L+P + + +N
Sbjct: 704 DKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSN 761
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 247/516 (47%), Gaps = 38/516 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGG---SWNAMLGAYTQNGFPGRTLELFLDM- 134
L R + Y DA +F +P WN ++ T G L +L M
Sbjct: 77 LQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMW 136
Query: 135 -NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
+ S + T+ V++S A + + + +H G G++ + S+L+ Y +
Sbjct: 137 AHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGL 196
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DAR++FD + ++ V WNV++ Y+ AG+ AV +F M P T A L
Sbjct: 197 LWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSV 256
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
+ S + G+Q+H + +K E + V +L MY KC L+D W
Sbjct: 257 SATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG--------------W 302
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+LF MP ++++WN M++G ++ +AL M+K+
Sbjct: 303 -----------------KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIR 345
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D VTL +L L+ GKE+HG+I RN ++F+ +AL+D+Y KC +R A+
Sbjct: 346 PDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS- 404
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISS 492
Y S+ D V + +++GY G S+EA+ F ++ RP+ ++L ACA++++
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++ G+++H + ++N YE AL+++Y KC L+ + +F + S+ D + NSMI
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISS 524
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
F N EAL +F M EG+K ++T +L AC
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC 560
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 121/287 (42%), Gaps = 10/287 (3%)
Query: 382 ILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L C S + +G +VHG + ++++ + L+ MY R A F + +
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 441 RDK--VSWNAVLTGYARRGQSEEAMTSFSEMQWE----TRPSKFTFETLLAACANISSLE 494
+ WN ++ G G A+ + +M W P TF ++ +CA + ++
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+ +H + ++ AL+++Y L A +VF + D ++ N M+ G+
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
A+E+FG M+ G +P+ T L E ++ +Q ++ KYG+ ++
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQ-LHTLAVKYGLESEV 282
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
++ +Y + + + MP + V + C +NG+
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLV-TWNGMISGCVQNGF 328
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 318/617 (51%), Gaps = 35/617 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + + Y KCG ++ A+ +FD + E++ WNAMLG Y QNG+ +ELF +M
Sbjct: 362 VYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKS 421
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G + TY+++L + A L + QLH +I+K F N+ + ++LVD Y K + D
Sbjct: 422 CGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALED 481
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR+ F+ I+N++ VSWNVI+ Y+ + EA +F +M I P + A+ L AC+
Sbjct: 482 ARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACAS 541
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ +G Q+H + +K E SL +MY KCG ++ A +L ER+++S ++
Sbjct: 542 VRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNAL 601
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA + +A LF +M + S +
Sbjct: 602 IAGYA-QINLEQAVNLFRDMLVEGINS-------------------------------TE 629
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFY 435
+T +L+ C ++ +G+++H I + + F+ +LL MY A + F
Sbjct: 630 ITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFS 689
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
+ S + V W A+++G ++ S A+ + EM+ P + TF + L ACA +SS++
Sbjct: 690 EFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIK 749
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGF 553
G + H + ++ + + ALV++Y KC ++ +++VFKE S DVI NSMI+GF
Sbjct: 750 DGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGF 809
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N +AL VF MK+ + PD +TF G+L AC H G V FD M YG+ P+
Sbjct: 810 AKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPR 869
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+H CM+ L R+G +KE E+F+N++ F P + + CR +G G+ AA +L
Sbjct: 870 ADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLI 929
Query: 674 ELNPWAPFQFKITTNRF 690
EL P + + +N +
Sbjct: 930 ELEPQNSSPYVLLSNIY 946
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 186/636 (29%), Positives = 310/636 (48%), Gaps = 57/636 (8%)
Query: 22 PSKTLTKTISGHL------KSDEPVSYSLYAHLFQLCA---SSKAIVEARKLESNLVTFY 72
PS TL I H+ KS + ++SL+ + Q + ++ I+ A+ L+ + F+
Sbjct: 35 PSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFSTTNKIIHAQSLK---LGFW 91
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
L N ++ Y KC ++D A F ++ ++D +WN++L +++ GFP ++ F
Sbjct: 92 SKG--VLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFG 149
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ +SGV N+ T+A VL S A + +Q+H +VK GF E +L+ Y KC
Sbjct: 150 LLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCN 209
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF----- 247
+TDAR +FD + VSW ++ Y+ G +EAV +F +M + P F
Sbjct: 210 FLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVIN 269
Query: 248 ----------ANALF---------ACSFLSSPY-------EGMQIHGVIIKIDFEGDDVV 281
A+ LF A + + S + E ++ + K +
Sbjct: 270 AYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRST 329
Query: 282 LGSLTEMYVKCGRLEDARGLL------DQPDERNIISWTSIVSGYAISGRIREARELFNE 335
LGS+ L+ GLL Q N+ +S+VS YA G++ A+++F+
Sbjct: 330 LGSVLSAIASLAALD--FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDT 387
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ E+NV+ WNAML GY ++ E ++ F M+ D T IL+ CA L + +G
Sbjct: 388 LNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLG 447
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H I +N ++SN+FV NAL+DMY K G L AR F ++ + RD VSWN ++ GY +
Sbjct: 448 HQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF-ELIRNRDNVSWNVIIVGYVQ 506
Query: 456 RGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
EA F M P + + ++L+ACA++ LEQGKQ+HC ++ E +
Sbjct: 507 EEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYS 566
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+L+++Y KC ++ A ++ V+ N++I G+ +A+ +F M EGI
Sbjct: 567 GSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGI 625
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
ITF +L AC + + L Q S+ K G+
Sbjct: 626 NSTEITFASLLDACHEQQKLNLGRQIH-SLILKMGL 660
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/640 (30%), Positives = 332/640 (51%), Gaps = 34/640 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ + ++ + C K++ + + + VF+ + I+ Y + G+L DA+
Sbjct: 56 PDKYT-FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQY 114
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD +P++D WN ML Y +NG G +++FL+M HS + N +T+A VL A E
Sbjct: 115 LFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAM 174
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + QLHG+ V G + + ++L+ Y KC + AR++FD + + VSWN I+
Sbjct: 175 LDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISG 234
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G EA +F M+ I+P + TFA+ L + L S +IHG II+ D
Sbjct: 235 YVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLD 294
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L ++Y KC +E A+ L Q + + T+++SGY ++G+ +EA E F + +
Sbjct: 295 VFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ 354
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
M+ T+ VT I AGL+ + +GKE+
Sbjct: 355 ER--------------------------MKPTS-----VTFSSIFPAFAGLAALNLGKEL 383
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG I + V +A+LDMY KCG L A F +++++ D + WN+++T ++ G+
Sbjct: 384 HGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCSQNGR 442
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA+ F +M E TR + L+ACAN+ +L GK+IH +I+ ++ +
Sbjct: 443 PGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESS 502
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y KC L ++ RVF + + NS+I + ++ +E L +F M + GI+PD
Sbjct: 503 LIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPD 562
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+TF GI+ AC H G V ++++ M +YGI ++EHY C+ ++ R G + E + +
Sbjct: 563 HVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETI 622
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
N MPF P + + C +G L E A++ L +L+P
Sbjct: 623 NSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDP 662
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 252/503 (50%), Gaps = 33/503 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y + G+L DA+ LF + +WN M+ +T G L +L M +GVS ++ T+
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
V+++ + + K +H + G +V + SSL+ Y + ++DA+ +FD+I
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K++V WNV++ Y+ G+ A+ +F +M +I+P + TFA L C+ + G Q+
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+ + E D V +L MY KC L+ AR L D + +++SW I+SGY +G +
Sbjct: 182 HGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLM 241
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA LF R +IS AG D +T L
Sbjct: 242 GEAEHLF-----RGMIS-----AGIKP---------------------DSITFASFLPCV 270
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
L +K KE+HG+I R+ ++F+ +AL+D+Y KC ++ A+ Q S D V
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQ-SSSFDTVVC 329
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+++GY G+++EA+ +F + Q +P+ TF ++ A A +++L GK++H +I+
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ A++++Y KC L+ A RVF + D I NSMI N R EA+ +
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449
Query: 566 FGLMKKEGIKPDHITFHGILLAC 588
F M EG + D ++ G L AC
Sbjct: 450 FRQMGMEGTRYDCVSISGALSAC 472
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 3/273 (1%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y +G +++A+ LF + +WN M+ G+T + AL F M D+ T
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ C GL +KMGK VH ++ ++FV ++L+ +Y + G+L A+ F + Q
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQ 498
+D V WN +L GY + G S A+ F EM+ E +P+ TF +L+ CA+ + L+ G Q
Sbjct: 122 -KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H + E++ L+ +Y+KC CL+ A ++F D++ N +I G+ N
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
EA +F M GIKPD ITF L C++E
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITF-ASFLPCVNE 272
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY + G+L+ A+ FY + Q +WN ++ G+ GQ A+ + +M P K+
Sbjct: 1 MYVRTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKY 59
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF ++ AC + S++ GK +H V + +V +L+++Y + L A +F
Sbjct: 60 TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
D ++ N M+ G+ N A+++F M+ IKP+ +TF +L C E + L
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 599 QF 600
Q
Sbjct: 180 QL 181
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 319/632 (50%), Gaps = 33/632 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP + L A + CA S+A ++ VF+ + Y K G +D A
Sbjct: 133 EPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAM 192
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FD +P R+ +W A++ Y+Q G G LELF M GV ++ A+ + +
Sbjct: 193 SVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLG 252
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +Q+HG + + + ++L+D Y KC + ARR+FD ++N+N VSW ++
Sbjct: 253 FVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIA 312
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ EA+ MF+++ + +P F + L +C L++ ++G Q+H +IK D E
Sbjct: 313 GYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLES 372
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D+ V +L +MY KC L EAR +F +
Sbjct: 373 DEYVKNALIDMYAKCEHLT-------------------------------EARAVFEALA 401
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
E + IS+NAM+ GY R A++ MR + +T +L V + S++++ K+
Sbjct: 402 EDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQ 461
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG I ++ S +++ +AL+D+Y K + A++ F M Q RD V WNA++ G A+
Sbjct: 462 IHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLM-QNRDMVIWNAMIFGLAQNE 520
Query: 458 QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ EEA+ F+ ++ P++FTF L+ + ++S+ G+Q H +I+ + +
Sbjct: 521 RGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISN 580
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+++Y KC +E +F+ + DVI NSMI + + EAL VFG+M+ G++P
Sbjct: 581 ALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEP 640
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+++TF +L AC H G V L F+SM+ KY + P EHY ++ L+ R G + ++F
Sbjct: 641 NYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEF 700
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
+ RMP P + R + C G +G +A
Sbjct: 701 IERMPIEPVATIWRSLLSACHLFGNVEIGRYA 732
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 297/600 (49%), Gaps = 60/600 (10%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
AR + S L+ P +FL N + Y K G L DAR LFD MP R+ SW + + Y
Sbjct: 52 AHARAVVSGLL-----PDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMY 106
Query: 119 TQNGFPGRTLELFLDMNHSGVSA------NQITYANVLRSSAEELELGVSKQLHGLIVKR 172
Q+G L LF +G ++ N+ A+ LR+ A+ +Q+HG+ K
Sbjct: 107 AQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKL 166
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
G NV + ++LV+ Y K + A +FD + +N V+W ++ Y AG A+ +F
Sbjct: 167 GLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELF 226
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M + +RP F A+A ACS L G QIHG + E D V+ +L ++Y KC
Sbjct: 227 GRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKC 286
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
RL AR L D + RN++SWT++++GY + EA +F W AG
Sbjct: 287 SRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMF----------WQLSQAG-- 334
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
W+ D ILN C L+ I G++VH + + D S+ +
Sbjct: 335 ----WQP---------------DVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEY 375
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW- 471
V NAL+DMY KC +L AR F +++ D +S+NA++ GYAR G A+ F +M++
Sbjct: 376 VKNALIDMYAKCEHLTEARAVFEALAE-DDAISYNAMIEGYARLGDLTGAVEIFGKMRYC 434
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+PS TF +LL ++ S LE KQIH ++++ +++ AL++VY+K ++ A
Sbjct: 435 SLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA 494
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL-----L 586
VF + D++I N+MI G NERG EA+++F ++ G+ P+ TF ++ L
Sbjct: 495 KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTL 554
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
A I G Q F + K G +I +Y + G+++E R+ F T+
Sbjct: 555 ASIFHG------QQFHAQIIKAGADSDPHISNALIDMYAKCGFIEE-----GRLLFESTL 603
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 188/636 (29%), Positives = 319/636 (50%), Gaps = 33/636 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C+SS+++ + RK+ +++ L N + YGKCG+L DAR +FD MP
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ S+ +++ Y+QNG + L+L M + +Q + +++++ A ++G+ KQ
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH ++K ++I +++L+ Y + M+DA R+F I K+ +SW+ I+ + G
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 225 GKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+ +ML + P + F ++L ACS L P G QIHG+ IK + G+ +
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY +CG L AR +F+++ + S
Sbjct: 310 SLCDMYARCGFL-------------------------------NSARRVFDQIERPDTAS 338
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN ++AG + EA+ MR + D ++L +L + G ++H +I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + +++ V N+LL MY C +L F D VSWN +LT + Q E +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 464 TSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M E P T LL C ISSL+ G Q+HC+ ++ + L+++Y
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L A R+F + DV+ +++I+G+ + G EAL +F MK GI+P+H+TF
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V+ L+ + +M+ ++GI P EH C++ L R G + E E F++ M
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
P V + + + C+ G L + AA + +++P+
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 240/498 (48%), Gaps = 34/498 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
TY +++ + + L +++H I+ + IL + ++ YGKC + DAR +FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+N VS+ ++ Y G G EA+ ++ KML+ED+ P F F + + AC+ S G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+H +IK++ + +L MYV+ ++ DA + +++ISW+SI++G++ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
EA EM V N +++F G L
Sbjct: 249 FEFEALSHLKEMLSFGVFHPN----------------EYIF--------------GSSLK 278
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C+ L G ++HG +++ + N +L DMY +CG L SAR F Q+ +R D
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI-ERPDTA 337
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWN ++ G A G ++EA++ FS+M+ P + +LL A +L QG QIH ++
Sbjct: 338 SWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI 397
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREA 562
I+ + ++ +L+ +YT C L +F++ ++ D + N+++ +E+ E
Sbjct: 398 IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L +F LM +PDHIT +L C+ ++KL Q K G+ P+ +I
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLID 516
Query: 623 LYCRYGYMKELEDFVNRM 640
+Y + G + + + M
Sbjct: 517 MYAKCGSLGQARRIFDSM 534
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 4/247 (1%)
Query: 345 NAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
N + +S ++EAL+ F F + ++ I T ++ C+ + G+++H I
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ + ++N +L MY KCG+LR AR F M + R+ VS+ +V+TGY++ GQ EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAI 153
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ +M Q + P +F F +++ ACA+ S + GKQ+H VI+ +++ + AL+ +Y
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITF 581
+ + A RVF D+I +S+I GF EAL M G+ P+ F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 582 HGILLAC 588
L AC
Sbjct: 274 GSSLKAC 280
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/638 (29%), Positives = 326/638 (51%), Gaps = 37/638 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C+SS+++ + RK+ +++ L N + YGKCG+L DAR +FD MP
Sbjct: 67 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 126
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ S+ +++ Y+QNG + L+L M + + +Q + +++++ A ++ + KQ
Sbjct: 127 ERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQ 186
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH ++K ++I +++L+ Y + M+DA ++F I K+ +SW+ I+ + G
Sbjct: 187 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGF 246
Query: 225 GKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+ +ML + P + F ++L ACS L P G QIHG+ IK++ G+ +
Sbjct: 247 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGC 306
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY +CG L+ AR +FN++ + S
Sbjct: 307 SLCDMYARCGFLD-------------------------------SARRVFNQIERPDTAS 335
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM--GKEVHGF 401
WN ++AG + EA+ MR + D ++L +L CA + + G ++H F
Sbjct: 336 WNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLL--CAQTKPMALCQGMQIHSF 393
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I + + +++ V N+LL MY C +L F + D VSWNA+LT + Q E
Sbjct: 394 IIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVE 453
Query: 462 AMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ F M E P T LL C ISSL+ G Q+HC+ + + + L++
Sbjct: 454 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLID 513
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC L A R+F + DV+ +++I+G+ + G EAL +F MK GI+P+H+T
Sbjct: 514 MYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVT 573
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F G+L AC H G V+ L+ + M+ ++GI P EH C++ L R G++ E E F++ M
Sbjct: 574 FVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEM 633
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
P V + + + C+ G L + AA + +++P+
Sbjct: 634 KLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPF 671
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 249/535 (46%), Gaps = 41/535 (7%)
Query: 112 NAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
N + + +N F LE F +S TY +++ + + L +++H I+
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ IL + ++ YGKC + DAR +FD + +N VS+ ++ Y G EA+
Sbjct: 92 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
++ KML+ D+ P F F + + AC+ G Q+H +IK++ + +L MYV
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYV 211
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
+ ++ DA + +++ISW+SI++G++ G EA EM V N
Sbjct: 212 RFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN----- 266
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+++F G L C+ L G ++HG + + + N
Sbjct: 267 -----------EYIF--------------GSSLKACSSLLRPDYGSQIHGLCIKLELTGN 301
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+L DMY +CG L SAR F Q+ +R D SWN ++ G A G ++EA++ FSEM+
Sbjct: 302 AIAGCSLCDMYARCGFLDSARRVFNQI-ERPDTASWNVIIAGLANNGYADEAVSVFSEMR 360
Query: 471 WET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
P + +LL A +L QG QIH F+I+ + ++ +L+ +YT C L
Sbjct: 361 NSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLY 420
Query: 530 YAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+F++ + D + N+++ +E+ E L +F LM +PDHIT +L C
Sbjct: 421 CCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 480
Query: 589 IHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ ++KL Q + C K G++ + +I +Y + G +++ + M
Sbjct: 481 VEISSLKLGSQ----VHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSM 531
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 28/332 (8%)
Query: 345 NAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
N + R+ ++EAL+ F F + ++ I T ++ C+ + G+++H I
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ + ++N +L MY KCG+LR AR F M + R+ VS+ +V+TGY++ GQ EA+
Sbjct: 92 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQEAEAI 150
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
T + +M Q + P +F F +++ ACA + GKQ+H VI+ +++ + AL+ +Y
Sbjct: 151 TLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMY 210
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITF 581
+ + A +VF + D+I +S+I GF EAL M G+ P+ F
Sbjct: 211 VRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 270
Query: 582 HGILLAC-----------IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
L AC IH +KL L C + +Y R G++
Sbjct: 271 GSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCS------------LCDMYARCGFL 318
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
N++ P I NGYA
Sbjct: 319 DSARRVFNQIE-RPDTASWNVIIAGLANNGYA 349
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 290/500 (58%), Gaps = 4/500 (0%)
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+T A +FD IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L A
Sbjct: 53 LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ + EG QIHG ++K+ + D V SL MYVK GR EDAR + DQ R+++S+
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T+++ GYA +G I A+++F+E+P ++V+SWNA+++GY + +KEAL+ M KT
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+ T+ +L+ CA + I++G++VH +I + + SN+ + NAL+D+Y KCG + +A
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGL 292
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F +S +D +SWN ++ GY +EA+ F EM + P++ T ++L ACA++ +
Sbjct: 293 FEGLSY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351
Query: 493 LEQGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++ G+ IH ++ + ++ R +L+++Y KC +E A +VF + + N+MI
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
GF + R A ++F M+K+GI+PD ITF G+L AC H G + L F SM Y I
Sbjct: 412 FGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKI 471
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P+LEHY CMI L G KE E+ +N M +P + + C+ +G LGE A+
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQ 531
Query: 671 RLNELNPWAPFQFKITTNRF 690
L ++ P + + +N +
Sbjct: 532 NLIKIEPKNSGSYVLLSNIY 551
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 242/539 (44%), Gaps = 99/539 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +FD + E + WN M + + P L L++ M G+ N T+ +L++ A+
Sbjct: 56 AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR---------------- 199
+Q+HG ++K G ++ + +SL+ Y K DAR+
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTAL 175
Query: 200 ---------------MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
MFD+I K+ VSWN ++ Y GN KEA+ +F +M++ +++P
Sbjct: 176 IKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDE 235
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T L AC+ +S G Q+H I F + ++ +L ++Y+KCG +E A GL +
Sbjct: 236 STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY T L+KEAL
Sbjct: 296 LSYKDVISWNTLIGGY-------------------------------THMNLYKEALLLF 324
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + ++VT+ IL CA L I +G+ +H +I + S+ + +L+DMY
Sbjct: 325 QEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYA 384
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KCG++ +A+ F M R SWNA++ G+A G++ A FS M+ + P TF
Sbjct: 385 KCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFV 443
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC++ L+ G+ I R+ E +K + L
Sbjct: 444 GLLSACSHSGMLDLGRHI----FRSMTE------------------------DYKITPKL 475
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ C +LG H+ +EA E+ M+ + PD + + +L AC GNV+L F
Sbjct: 476 EHYGCMIDLLG--HSGLFKEAEEMINSME---MDPDGVIWCSLLKACKMHGNVELGESF 529
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 197/458 (43%), Gaps = 70/458 (15%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P SY+ + L + CA SKA E +++ +++ +++ I Y K G +DAR
Sbjct: 101 PNSYT-FPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARK 159
Query: 99 -------------------------------LFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
+FDE+P +D SWNA++ Y + G
Sbjct: 160 VFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEA 219
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF +M + V ++ T VL + A+ + + +Q+H I GF N+ + ++L+D
Sbjct: 220 LELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDL 279
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F+ + K+ +SWN ++ Y KEA+++F +MLR P T
Sbjct: 280 YIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTM 339
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G + SL +MY KCG +E A+ + D
Sbjct: 340 LSILPACAHLGAIDIGRWIH-VYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
R++ SW +++ G+A+ GR A ++F+
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANPAFDIFSR----------------------------- 429
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYR 422
MRK + D +T +L+ C+ + +G+ + + DY + + ++D+
Sbjct: 430 --MRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM-TEDYKITPKLEHYGCMIDLLG 486
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
G + A M D V W ++L G E
Sbjct: 487 HSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVE 524
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 40/328 (12%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K + KT ++K DE S + CA S +I R++ S + + ++N
Sbjct: 224 KEMMKT---NVKPDE----STMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 276
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y KCG ++ A GLF+ + +D SWN ++G YT L LF +M SG S N+
Sbjct: 277 IDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNE 336
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKR--GFCGNVILESSLVDAYGKCMVMTDARRMF 201
+T ++L + A + + + +H I KR G L +SL+D Y KC + A+++F
Sbjct: 337 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVF 396
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + N++ SWN ++ + + G A +F +M ++ I P + TF L ACS +
Sbjct: 397 DSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACS-----H 451
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
GM G I S+TE Y +LE ++D + G+
Sbjct: 452 SGMLDLGRHI----------FRSMTEDYKITPKLEHYGCMID-------------LLGH- 487
Query: 322 ISGRIREARELFNEMP-ERNVISWNAML 348
SG +EA E+ N M + + + W ++L
Sbjct: 488 -SGLFKEAEEMINSMEMDPDGVIWCSLL 514
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 310/596 (52%), Gaps = 33/596 (5%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A LF MPE++G SWNA+L Y Q G + L+LF M ++ T + VL+ A
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L K LH L ++ G + L SLVD Y KC + DA ++F I+N + V+W+ +
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ G+G+EA +F M R+ RP FT ++ + + + G IHG I K F
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D++V L MY+K +ED + + +++SW +++SG+ S +F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M +L G+ ++ F F+ +L C+ L + + G
Sbjct: 244 M----------LLEGFKPNM-------FTFIS--------------VLRSCSSLLDPEFG 272
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K+VH I +N + FV AL+DMY K L A + F ++ RD SW +++GYA+
Sbjct: 273 KQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVN-RDIFSWTVIISGYAQ 331
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
Q+E+A+ F +MQ E +P+++T + L+ C+++++LE G+Q+H ++ + ++
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFV 391
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
ALV++Y KC C+E+A +FK S D++ N++I G+ + +G +ALE F +M EGI
Sbjct: 392 GSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PD TF G+L AC G V+ + FDSM YGI P +EHY CM+ + R G E++
Sbjct: 452 MPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVK 511
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F+ M P + + C+ +G GE AA++L E+ P + + +N F
Sbjct: 512 IFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIF 567
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 226/448 (50%), Gaps = 33/448 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA++ ++ E + L + + FL ++ Y KCG + DA +F ++ D +W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
+AM+ Q G ELF M G NQ T ++++ ++ +L + +HG I K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF + ++ + L+ Y K + D ++F+ + N + VSWN ++ + + +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F++ML E +P FTF + L +CS L P G Q+H IIK + DD V +L +MY K
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
LEDA D+ R+I SWT I+SGYA + + +A + F +M +R I N
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQM-QREGIKPN------ 353
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ TL L+ C+ ++ ++ G+++H + + +I
Sbjct: 354 ------------------------EYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDI 389
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
FV +AL+D+Y KCG + A F + RD VSWN +++GY++ GQ E+A+ +F M
Sbjct: 390 FVGSALVDLYGKCGCMEHAEAIFKGLIS-RDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQ 498
E P + TF +L+AC+ + +E+GK+
Sbjct: 449 EGIMPDEATFIGVLSACSFMGLVEEGKK 476
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 181/416 (43%), Gaps = 47/416 (11%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K ++D +F+ M D SWNA+L + + GR +F M G
Sbjct: 191 NPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFK 250
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T+ +VLRS + L+ KQ+H I+K + + ++LVD Y K + DA
Sbjct: 251 PNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVA 310
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + N++ SW VI+ Y ++AV F +M RE I+P +T A+ L CS +++
Sbjct: 311 FDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATL 370
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G Q+H V +K GD V +L ++Y KCG +E A + R+I+SW +I+SGY
Sbjct: 371 ENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGY 430
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ G+ +A E F M ++ D+ T
Sbjct: 431 SQHGQGEKALEAFRMMLSEGIMP-------------------------------DEATFI 459
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN-------ALLDMYRKCGNLRSARIW 433
+L+ C+ + ++ GK+ R D S I+ N ++D+ + G +I+
Sbjct: 460 GVLSACSFMGLVEEGKK------RFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIF 513
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTFETLLAA 486
+M+ + W VL G E+A EM+ S + A+
Sbjct: 514 IEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFAS 569
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 40/376 (10%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
+++ ++++ F+ ++ Y K L+DA FD + RD SW ++ Y Q
Sbjct: 272 GKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQ 331
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
+ ++ F M G+ N+ T A+ L + L +QLH + VK G G++ +
Sbjct: 332 TDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFV 391
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
S+LVD YGKC M A +F + +++ VSWN I+ Y G G++A+ F ML E I
Sbjct: 392 GSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Query: 241 RPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
P TF L ACSF+ EG +I+G+ I+ + ++ + G
Sbjct: 452 MPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEH------YACMVDILGRAG 505
Query: 294 RLEDARGLLDQPDERNI----ISWTSIVSGYAISGRI----REARELFNEMP--ERNVIS 343
+ + + + +E N+ + W +++ + G + + A++LF P + + I
Sbjct: 506 KFNEVKIFI---EEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYIL 562
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+ + A R W + + LM T++ I + G S +++ +VH F+
Sbjct: 563 LSNIFASKGR---WDDVRNIRALM--TSRGIKKE---------PGCSWVEVDGQVHVFLS 608
Query: 404 RNDYSSNIFVSNALLD 419
++ I A LD
Sbjct: 609 QDGSHPKIREIYAKLD 624
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+L A C+ + R+L + V +F+ + ++ YGKCG ++ A
Sbjct: 351 KPNEYTL-ASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAE 409
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+F + RD SWN ++ Y+Q+G + LE F M G+ ++ T+ VL +
Sbjct: 410 AIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 309/586 (52%), Gaps = 36/586 (6%)
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+S++ YA++L+ E +K+LH LI+K L ++L+ AY K + A
Sbjct: 1 MSSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAH 60
Query: 199 RMFDDIQNKN-------------------------------AVSWNVIVRRYLVAGNGKE 227
+FD I N VSWN+ + Y G+ +
Sbjct: 61 HVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSD 120
Query: 228 AVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-L 285
AV ++ ML++ LN TF+ L CS G QI+G I+K F G DV +GS L
Sbjct: 121 AVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGF-GSDVFVGSPL 179
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY K G + DA+ D+ ERN++ ++++G G I E++ LF + ER+ ISW
Sbjct: 180 VDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWT 239
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M+ G ++ L +EALD MR +DQ T G +L C L + GK++H ++ R
Sbjct: 240 IMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRT 299
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
D+ N+FV +AL+DMY KC +++SA F +M Q ++ +SW A+L GY + G SEEA+
Sbjct: 300 DHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQ-KNVISWTAMLVGYGQNGFSEEAVKI 358
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ P FT +++++CAN++SLE+G Q HC + + + AL+ +Y K
Sbjct: 359 FFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGK 418
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C E + R+F E + D + +++ G+ + E + +F M G+KPD +TF G+
Sbjct: 419 CGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGV 478
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC G V+ LQ+F+SM ++GI+P ++H C+I L R G ++E +F+N MP +P
Sbjct: 479 LSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHP 538
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V + CR +G +G+WAA L L P P + + ++ +
Sbjct: 539 DVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLY 584
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 244/523 (46%), Gaps = 98/523 (18%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S + YA L +LC S+ +A+KL ++ P FL N I Y K GNL A +F
Sbjct: 4 SSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVF 63
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELF----------------------------- 131
D +P+ + SWN +L Y++ G + ++F
Sbjct: 64 DHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVR 123
Query: 132 ---LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
L + + ++ N+IT++ +L ++ + + +Q++G I+K GF +V + S LVD Y
Sbjct: 124 VYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMY 183
Query: 189 GKCMVMTDARRMFDDIQNKNAV-------------------------------SWNVIVR 217
K ++ DA+R FD++ +N V SW +++
Sbjct: 184 TKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMIT 243
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G +EA+ MF +M FTF + L AC L + EG QIH +I+ D +
Sbjct: 244 GLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHK- 302
Query: 278 DDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D+V +GS L +MY KC ++ A + + ++N+ISWT+++ GY +G EA ++F EM
Sbjct: 303 DNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEM 362
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
V + D TLG +++ CA L+ ++ G
Sbjct: 363 QRNGV-------------------------------EPDDFTLGSVISSCANLASLEEGA 391
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+ H + S I VSNAL+ +Y KCG+ ++ F +M+ RD+VSW A+L GYA+
Sbjct: 392 QFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI-RDEVSWTALLAGYAQF 450
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
G++ E + F M +P TF +L+AC+ +E+G Q
Sbjct: 451 GKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQ 493
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 197/451 (43%), Gaps = 69/451 (15%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + LC+ + + R++ ++ F VF+ + ++ Y K G + DA+ FDEMP
Sbjct: 141 FSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMP 200
Query: 105 ER-------------------------------DGGSWNAMLGAYTQNGFPGRTLELFLD 133
ER D SW M+ QNG L++F +
Sbjct: 201 ERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFRE 260
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M +G + +Q T+ +VL + L LG KQ+H +++ NV + S+LVD Y KC
Sbjct: 261 MRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRS 320
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A +F + KN +SW ++ Y G +EAV +FF+M R + P +FT + + +
Sbjct: 321 IKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISS 380
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L+S EG Q H + V +L +Y KCG E++ L + + R+ +SW
Sbjct: 381 CANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSW 440
Query: 314 TSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
T++++GYA G+ E LF M + +++ +L+ +R+ L ++ L + M K
Sbjct: 441 TALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK 500
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
HG + D+ + I +D+ + G L
Sbjct: 501 E----------------------------HGIMPIVDHCTCI------IDLLGRAGRLEE 526
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
AR + M D V W +L+ G E
Sbjct: 527 ARNFINNMPCHPDVVGWATLLSSCRVHGDME 557
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 328/652 (50%), Gaps = 35/652 (5%)
Query: 29 TISGHLK-SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
T + HLK S + S Y +L C + +++ +++ +++ P + L N + Y
Sbjct: 66 TFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMY 125
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
GKCG+L DAR FD M R SW M+ Y+QNG + +++ M SG +Q+T+
Sbjct: 126 GKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFG 185
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+++++ ++ + QLHG ++K G+ ++I +++L+ Y K + A +F I K
Sbjct: 186 SIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTK 245
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQI 266
+ +SW ++ + G EA+ +F M R+ + +P F F + AC L P G QI
Sbjct: 246 DLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQI 305
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
G+ K LG RN+ + S+ YA G +
Sbjct: 306 QGMCAKFG-------LG------------------------RNVFAGCSLCDMYAKFGFL 334
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
A+ F ++ +++SWNA++A S + EA+ F M D +T +L C
Sbjct: 335 PSAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCAC 393
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ G ++H +I + V N+LL MY KC NL A F +S+ + VSW
Sbjct: 394 GSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSW 453
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
NA+L+ ++ Q EA F M + E +P T T+L CA + SLE G Q+HCF ++
Sbjct: 454 NAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVK 513
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ ++V L+++Y KC L++A VF + + D++ +S+I+G+ G+EAL +
Sbjct: 514 SGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNL 573
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F +M+ G++P+ +T+ G+L AC H G V+ +++M + GI P EH CM+ L
Sbjct: 574 FRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLA 633
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + E E+F+ + F+P + M + + C+ +G + E AA + +L+P
Sbjct: 634 RAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDP 685
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 148/277 (53%), Gaps = 5/277 (1%)
Query: 357 WKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
++EALD F F ++ ++ ++ T ++ C + +K GK +H I +++ ++ + N
Sbjct: 60 YREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQN 119
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR- 474
+L+MY KCG+L+ AR F M Q R VSW +++GY++ GQ +A+ + +M
Sbjct: 120 HILNMYGKCGSLKDARKAFDTM-QLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYF 178
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P + TF +++ AC ++ G Q+H VI++ Y+ +++ + AL+ +YTK + +A V
Sbjct: 179 PDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDV 238
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGN 593
F S+ D+I SMI GF EAL +F M ++G+ +P+ F + AC
Sbjct: 239 FTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLK 298
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ Q M K+G+ + + +Y ++G++
Sbjct: 299 PEFGRQ-IQGMCAKFGLGRNVFAGCSLCDMYAKFGFL 334
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF------SEMQWETRPSKFTFETLLAACA 488
Y + ++S N+ + ++ EA+ +F S +Q E PS T+ L+ AC
Sbjct: 36 YDTNYHGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLE--PS--TYVNLILACT 91
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
N+ SL+ GK+IH ++++ + ++V + ++ +Y KC L+ A + F V+
Sbjct: 92 NVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTI 151
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI G+ N + +A+ ++ M + G PD +TF I+ AC G++ L Q + K
Sbjct: 152 MISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHV-IKS 210
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELED 635
G L +I +Y ++G + D
Sbjct: 211 GYDHHLIAQNALISMYTKFGQIAHASD 237
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 185/627 (29%), Positives = 321/627 (51%), Gaps = 33/627 (5%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L A + + C SKA+ ++ V V++ I Y K G +D+A +F +
Sbjct: 122 LLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHAL 181
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P R +WN ++ Y Q G G LELF M GV ++ A+ + + + L +
Sbjct: 182 PVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGR 241
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HG + + + + L+D Y KC ++ AR++FD ++ +N VSW ++ Y+
Sbjct: 242 QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNS 301
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+ MF+ M + +P F + L +C L++ ++G QIH +IK D E D+ V
Sbjct: 302 FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKN 361
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KC L EAR +F+ + E + IS
Sbjct: 362 ALIDMYAKCEHLT-------------------------------EARAVFDALAEDDAIS 390
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+NAM+ GY+++ EA++ MR + +T +L V + I++ K++HG I
Sbjct: 391 YNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLII 450
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ S +++ ++AL+D+Y KC + A+ F M +D V WN+++ G+A+ Q EEA+
Sbjct: 451 KSGTSLDLYAASALIDVYSKCSLVNDAKTVF-NMLHYKDMVIWNSMIFGHAQNEQGEEAI 509
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F+++ P++FTF L+ + ++S+ G+Q H ++I+ + + AL+++Y
Sbjct: 510 KLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMY 569
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC ++ +F+ + DVI NSMI + + EAL+VF LM + ++P+++TF
Sbjct: 570 AKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFV 629
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V L F+SM+ Y I P +EHY ++ L+ R G + ++F+ RMP
Sbjct: 630 GVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPI 689
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAA 669
P + R + C G A +G +AA
Sbjct: 690 KPAAAVWRSLLSACHLFGNAEIGRYAA 716
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 289/576 (50%), Gaps = 50/576 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL N + Y G L DAR LFD MP R+ SW +++ YTQ+G + LF+
Sbjct: 53 LFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQK 112
Query: 137 SGVSA-NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+ N+ A+VLR+ + + + +Q+HG+ VK NV + ++L++ Y K M
Sbjct: 113 ASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMD 172
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+A +F + + V+WN ++ Y G G A+ +F +M E +RP F A+A+ ACS
Sbjct: 173 EAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACS 232
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G QIHG + E D V+ L ++Y KC RL AR L D + RN++SWT+
Sbjct: 233 ALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTT 292
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++SGY + EA +F WN AG W+ D
Sbjct: 293 MISGYMQNSFNAEAITMF----------WNMTQAG------WQP---------------D 321
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
ILN C L+ I G+++H + + D ++ +V NAL+DMY KC +L AR F
Sbjct: 322 GFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFD 381
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
+++ D +S+NA++ GY++ EA+ F M+ + RPS TF +LL ++ ++E
Sbjct: 382 ALAE-DDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIE 440
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
KQIH +I++ +++ AL++VY+KC + A VF D++I NSMI G
Sbjct: 441 LSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHA 500
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVKLALQFFDSMRCKYG 609
NE+G EA+++F + G+ P+ TF ++ LA + G Q F + K G
Sbjct: 501 QNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG------QQFHAWIIKAG 554
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
+ +I +Y + G++KE RM F T
Sbjct: 555 VDNDPHVSNALIDMYAKCGFIKE-----GRMLFEST 585
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 243/527 (46%), Gaps = 41/527 (7%)
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
++ +H G ++ L + L+ Y + DAR +FD + ++N VSW ++ Y
Sbjct: 36 LNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYT 95
Query: 221 VAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G A+ +F + P F A+ L AC+ + G Q+HG+ +K+D + +
Sbjct: 96 QHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANV 155
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V +L +Y K G +++A + R ++W ++++GYA G A ELF+ M
Sbjct: 156 YVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIE 215
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
V D+ L ++ C+ L ++ G+++H
Sbjct: 216 GVRP-------------------------------DRFVLASAVSACSALGFLEGGRQIH 244
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G+ +R+ ++ V N L+D+Y KC L +AR F M + R+ VSW +++GY + +
Sbjct: 245 GYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCM-EYRNLVSWTTMISGYMQNSFN 303
Query: 460 EEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EA+T F M Q +P F ++L +C +++++ QG+QIH VI+ E + + AL
Sbjct: 304 AEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNAL 363
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y KC L A VF + D I N+MI G+ N EA+ +F M+ ++P
Sbjct: 364 IDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSL 423
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
+TF +L + ++L+ Q + K G L +I +Y + + + + N
Sbjct: 424 LTFVSLLGVSSSQLAIELSKQ-IHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFN 482
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE--LNPWAPFQF 683
+ + V IF + GE A + N+ L+ AP +F
Sbjct: 483 MLHYKDMVIWNSMIFGHAQNEQ----GEEAIKLFNQLLLSGMAPNEF 525
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 195/452 (43%), Gaps = 103/452 (22%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S AI + R++ ++++ ++ N I+ Y KC +L +AR +FD + E D S+
Sbjct: 332 CGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAM+ Y++N + +F M + + +T+ ++L S+ +L + +SKQ+HGLI+K
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G ++ S+L+D Y KC ++ DA+ +F+ + K+ V WN ++ + G+EA+ +
Sbjct: 452 SGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKL 511
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-------------ID---- 274
F ++L + P FTF + S L+S + G Q H IIK ID
Sbjct: 512 FNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAK 571
Query: 275 ----------FE---GDDVVL-GSLTEMYVKCGRLEDARGLLD-------QPD------- 306
FE G+DV+ S+ Y + G E+A + +P+
Sbjct: 572 CGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGV 631
Query: 307 --------------------------ERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
E I + S+V+ + SG++ A+E MP +
Sbjct: 632 LSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKP 691
Query: 341 VIS-WNAMLAG---YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA--------- 387
+ W ++L+ + + + + A + L T D L+ N+ A
Sbjct: 692 AAAVWRSLLSACHLFGNAEIGRYAAEMALLADPT----DSGPYVLLSNIYASKGLWADVH 747
Query: 388 ---------------GLSEIKMGKEVHGFIHR 404
G S I++ KEVH FI R
Sbjct: 748 NLRQQMDSSGTVKETGCSWIEVTKEVHTFIVR 779
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 282/497 (56%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L EG QIHG ++K+ +E D V SL MYVK GR +DA + D R+++S+T++
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G I A+++F+E+P ++V+SWNA+++GY + KEALD M KT D+
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I + SN+ + NAL+D+Y KCG + +A F
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D +SWN ++ GY +EA+ F EM + P+ T ++L ACA + +++
Sbjct: 296 LSN-KDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDF 354
Query: 496 GKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + R +L+++Y KC +E A +VF + CN+MI GF
Sbjct: 355 GRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGF 414
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++F M+K GI+PD ITF G+L AC H G + L + F SM Y I P+
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPK 474
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE E+ +N M P + + C+ +G LGE A++L
Sbjct: 475 LEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLI 534
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 535 KIEPENPGSYVLLSNIY 551
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 141/542 (26%), Positives = 238/542 (43%), Gaps = 105/542 (19%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P ++L++ M G+ N T+ +L+S A+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115
Query: 156 ELELGVSK---QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA--------------- 197
L VSK Q+HG ++K G+ ++ + +SL+ Y K DA
Sbjct: 116 ---LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172
Query: 198 ----------------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++MFD+I K+ VSWN I+ Y GN KEA+ +F +M++ +++
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P T + AC+ S G Q+H I + ++ +L ++Y KCG +E A GL
Sbjct: 233 PDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGL 292
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
+++ISW +++ GY T L+KEAL
Sbjct: 293 FQGLSNKDVISWNTMIGGY-------------------------------THLNLYKEAL 321
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLD 419
M ++ ++ + VT+ IL CA L I G+ +H +I + ++ + +L+D
Sbjct: 322 LLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLID 381
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KCG++ +A F M R + NA++ G+A G++ A FS M+ P
Sbjct: 382 MYAKCGDIEAAHQVFNSM-HHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF LL+AC++ L+ G++I + +N +K +
Sbjct: 441 TFVGLLSACSHSGMLDLGRRIFRSMTQN----------------------------YKIT 472
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
L+ C +LG H +EA E+ M E PD + + +L AC GNV+L
Sbjct: 473 PKLEHYGCMIDLLG--HLGLFKEAEEMINTMTME---PDGVIWCSLLKACKMHGNVELGE 527
Query: 599 QF 600
F
Sbjct: 528 SF 529
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 177/396 (44%), Gaps = 37/396 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y G ++ A+ +FDE+P +D SWNA++ Y G L+LF +M + V ++
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T V+ + A+ + + +Q+H I G N+ + ++L+D Y KC + A +F
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ NK+ +SWN ++ Y KEA+++F +MLR P + T + L AC+ L + G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355
Query: 264 MQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
IH V I +G + SL +MY KCG +E A + + R + + +++ G+
Sbjct: 356 RWIH-VYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGF 414
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A+ GR A ++F+ MRK + D +T
Sbjct: 415 AMHGRANAAFDIFSR-------------------------------MRKNGIEPDDITFV 443
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+L+ C+ + +G+ + + +N + + ++D+ G + A M+
Sbjct: 444 GLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTM 503
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
D V W ++L G E SF++ + P
Sbjct: 504 EPDGVIWCSLLKACKMHGNVELG-ESFAQKLIKIEP 538
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA S +I R++ S + + ++N I+ Y KCG ++ A GLF + +D SW
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N M+G YT L LF +M SG + N +T ++L + A+ + + +H I K
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364
Query: 172 R--GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
R G L +SL+D Y KC + A ++F+ + ++ + N ++ + + G A
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAF 424
Query: 230 VMFFKMLREDIRPLNFTFANALFACS 255
+F +M + I P + TF L ACS
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACS 450
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 289/525 (55%), Gaps = 7/525 (1%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQLH LI+ GF + I+ LV Y ++ DA + ++ + + WN+++
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISS 168
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G EA+ + +M + IRP FT+ + L AC G ++H I +
Sbjct: 169 YVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWN 228
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP- 337
V SL MY K G L AR L + ER+ +SW +++SGYA G +EA ELF +M
Sbjct: 229 LFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRV 288
Query: 338 ---ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
E N+I+WN + G +S ++EAL+ + MR D+D V + L C+ + IK+
Sbjct: 289 EGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKL 348
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G+E+HG R+ Y V NAL+ MY +C LR A F Q ++ ++ ++WN++L+GY
Sbjct: 349 GREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLF-QSTRTKNIITWNSMLSGYT 407
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YEINV 512
+SEEA F EM P+ T ++L CA +++L+ GK+ HC+++R ++ +
Sbjct: 408 HMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYL 467
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+ +LV++Y + + A R+F S D + S+I G+ GREAL++F MKK
Sbjct: 468 LLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKR 527
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
IKPDH+T +L AC H G V ++ F+ M YGIIP+LEH+ CM+ L+ R G + +
Sbjct: 528 HIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHK 587
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++ + RMP+ P+ M + CR +G A +GEWAA +L E+ P
Sbjct: 588 AKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRP 632
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 222/482 (46%), Gaps = 71/482 (14%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAML 115
K++ + ++L + +++ ++ + + Y L DA + + WN ++
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLI 166
Query: 116 GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
+Y +NG G L + M H G+ ++ TY +VL++ E+L++ K+LH I
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
N+ + +SLV Y K ++ AR +F+++ ++ VSWN ++ Y G KEA +F KM
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 236 LREDIRPLNFTFAN------------------------------------ALFACSFLSS 259
E I LN N L ACS + +
Sbjct: 287 RVEGIE-LNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGA 345
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G +IHG I+ ++G D V +L MY +C L A L +NII+W S++SG
Sbjct: 346 IKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSG 405
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y R EA LF EM +L+G + + VT+
Sbjct: 406 YTHMDRSEEASFLFREM----------LLSGI---------------------EPNYVTI 434
Query: 380 GLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
IL +CA ++ ++ GKE H +I R + + + N+L+DMY + G + A+ F +S
Sbjct: 435 ASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS 494
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
RRD+V++ +++ GY +G+ EA+ F EM + +P T +L+AC++ + +G
Sbjct: 495 -RRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGI 553
Query: 498 QI 499
++
Sbjct: 554 KL 555
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 3/223 (1%)
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L + GK++H I + + + L+ Y L A + S + WN
Sbjct: 106 LKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHT-ITENSNILHPLPWNL 164
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++ Y R G EA++++ +M + RP KFT+ ++L AC + GK++H + +C
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
N+ +LV +Y K L A +F+ D + N+MI G+ +EA E+FG
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
M+ EGI+ + IT++ I C+ GN + AL+ MR YGI
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMR-SYGI 326
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 317/650 (48%), Gaps = 36/650 (5%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T S L +D P + L + C S ++ + ++ I Y
Sbjct: 35 TYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYS 94
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+ AR +FD M +R+ W M+G YT+ G ++ M G+ + +T
Sbjct: 95 KFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLG 154
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L E + L + LH +++ GF +V L +S+++ Y KC + DA+ +F+ + ++
Sbjct: 155 LLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARD 211
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
+SWN +V Y GN +E + + +M + I P TF + + A + S G +HG
Sbjct: 212 VISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHG 271
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I++ E D + SL MY+KCG + A + + +++ISWT+++SG +
Sbjct: 272 HILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +F M + V+ A +A +L CA
Sbjct: 332 AVTVFRRMLKSRVMPSTATIAS-------------------------------VLAACAE 360
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L +G VHG+I R +I N+L+ MY KCG+L + F +MS RRD VSWNA
Sbjct: 361 LGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMS-RRDIVSWNA 419
Query: 449 VLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++G+A+ G +A+ F+EM + RP T +LL ACA+I +L QGK IH FV ++C
Sbjct: 420 IVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC 479
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
++ ALV++Y+KC L A + F D++ +S+I G+ + +G AL ++
Sbjct: 480 LGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYS 539
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
GI+P+H+ + IL AC H G V L FF SM +GI P+LEH C++ L R
Sbjct: 540 DFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRA 599
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G ++E F RM P++ +L + D CR G LG+ AR + L P
Sbjct: 600 GRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKP 649
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 199/439 (45%), Gaps = 43/439 (9%)
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
N S+N I+ R AG + ++ + ML D P TF + + AC+ L G+
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
H +I + D + SL Y K G + AR + D D+RN++ WT+++ Y +G
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
A ++N +MR+ VT+ L +
Sbjct: 130 HDVAFSMYN-------------------------------IMRRQGIQPSSVTM---LGL 155
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+G+ E+ + +H + + + S++ ++N++L++Y KCG + A+ F ++ RD +S
Sbjct: 156 LSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALF-ELMDARDVIS 214
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN++++GYA+ G E + M+ + P + TF +L++A A S L GK +H ++
Sbjct: 215 WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHIL 274
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R E + +L+ +Y KC + A R+F+ DVI +MI G N+ A+
Sbjct: 275 RAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVT 334
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ---FFDSMRCKYGIIPQLEHYECMI 621
VF M K + P T +L AC G+ L + R K I Q ++
Sbjct: 335 VFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQ----NSLV 390
Query: 622 KLYCRYGYMKELEDFVNRM 640
+Y + G++++ +RM
Sbjct: 391 TMYAKCGHLEQSCSVFDRM 409
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/658 (29%), Positives = 342/658 (51%), Gaps = 36/658 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H + P +++L ++ + CA+ A+ R + V++ + I+ Y G
Sbjct: 133 HPAAPSPDAHTL-PYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGL 191
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L DAR FD MP RD WN M+ Y + G G + LF +M SG N T A L
Sbjct: 192 LRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSV 251
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A E +L QLH L VK G V + ++L+ Y KC + DA R+F+ + + V+W
Sbjct: 252 CAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTW 311
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ + G EA+ +F MLR RP + T + L A + L+ +G ++HG II+
Sbjct: 312 NGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIR 371
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
D ++ +L ++Y KC R++ R AR L
Sbjct: 372 NCVHMDAFLVSALVDIYFKC---------------RDV----------------RTARNL 400
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
++ +V+ + +++GY + + ++AL F +L+ + K + VT+ +L CA +S
Sbjct: 401 YDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKP-NAVTVASVLPACASISA 459
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ +G+E+HG++ RN Y +V +AL+DMY KCG L + F +MS + D+V+WN++++
Sbjct: 460 LPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLK-DEVTWNSMIS 518
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+++ G+ +EA+ F +M E + + T + L+ACA++ ++ GK+IH +I+ +
Sbjct: 519 SFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKA 578
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ AL+++Y KC +E A+RVF+ + + NS+I + + +E++ M+
Sbjct: 579 DIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQ 638
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG KPDH+TF ++ AC H G V+ LQ F M +Y I P++EH+ CM+ LY R G +
Sbjct: 639 EEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRL 698
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ F+ MPF P + + CR + L + A++ L +L+P + + +N
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSN 756
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 207/446 (46%), Gaps = 45/446 (10%)
Query: 153 SAEELELGVSKQLHGLIVKRGFCGN---VILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
SA L LG+ Q+H V G N + L + L+ Y DA +F + A
Sbjct: 44 SAPHLPLGL--QIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAA 101
Query: 210 VS---WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL--NFTFANALFACSFLSSPYEGM 264
S WN ++R + AG+ AV+ + KM P T + +C+ L + G
Sbjct: 102 GSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGR 161
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H D V +L +MY G L DAR D R+ + W ++ GY +G
Sbjct: 162 LVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAG 221
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ A LF RN MR + + + TL L+
Sbjct: 222 DVGGAVRLF-----RN--------------------------MRVSGCEPNFATLACFLS 250
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW-FYQMSQRRDK 443
VCA +++ G ++H + + V+N LL MY KC L A W +++ R D
Sbjct: 251 VCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDA--WRLFELLPRDDL 308
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
V+WN +++G + G +EA+ F +M + RP T +LL A +++ L+QGK++H +
Sbjct: 309 VTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGY 368
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+IRNC ++ ALV++Y KC + A ++ + ++DV+I +++I G+ N +A
Sbjct: 369 IIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKA 428
Query: 563 LEVFGLMKKEGIKPDHITFHGILLAC 588
L++F + ++ IKP+ +T +L AC
Sbjct: 429 LQMFRYLLEQCIKPNAVTVASVLPAC 454
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 313/619 (50%), Gaps = 33/619 (5%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S A+ R++ + V + N + Y KCG++++AR +FD+M ++ SW
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSW 195
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
+G Y G E+F M GV N+ITY +VL + + L K +H I+
Sbjct: 196 TITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN 255
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + ++LV Y KC D R++F+ + N++ ++WN ++ G +EA +
Sbjct: 256 AGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEV 315
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ +M RE + P T+ L AC ++ + G +IH + K F D V +L MY +
Sbjct: 316 YNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSR 375
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG ++D AR +F++M ++VISW AM+ G
Sbjct: 376 CGSIKD-------------------------------ARLVFDKMVRKDVISWTAMIGGL 404
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+S EAL M++ + ++VT ILN C+ + ++ G+ +H + +++
Sbjct: 405 AKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA 464
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V N L++MY CG+++ AR F +M QR D V++NA++ GYA +EA+ F +Q
Sbjct: 465 HVGNTLVNMYSMCGSVKDARQVFDRMIQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523
Query: 472 ET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E +P K T+ +L ACAN SLE ++IH V + + + ALV Y KC
Sbjct: 524 EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSD 583
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A VF++ + +VI N++I G + RG++AL++F MK EG+KPD +TF +L AC H
Sbjct: 584 ASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSH 643
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G ++ ++F SM + IIP +EHY CM+ L R G + E E + MPF +
Sbjct: 644 AGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWG 703
Query: 651 KIFDKCRKNGYATLGEWAA 669
+ CR +G + E AA
Sbjct: 704 ALLGACRIHGNVPVAERAA 722
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/604 (27%), Positives = 311/604 (51%), Gaps = 36/604 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V+ S Y + + C K +V R++ +++ P + +N I Y +CG++++AR +
Sbjct: 21 VNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQV 80
Query: 100 FDEMP--ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ ++ ER SWNAM+ Y Q G+ + L+L M G++ ++ T + L S
Sbjct: 81 WKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPG 140
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L +++H ++ G +V + + +++ Y KC + +AR +FD ++ K+ VSW + +
Sbjct: 141 ALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIG 200
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G + A +F KM +E + P T+ + L A S ++ G +H I+ E
Sbjct: 201 GYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHES 260
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V +L +MY KCG +D R + ++ R++I+W +++ G A G EA E++N+M
Sbjct: 261 DTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQ 320
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
V+ +++T ++LN C + + GKE
Sbjct: 321 REGVMP-------------------------------NKITYVILLNACVNSAALHWGKE 349
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + + ++S+I V NAL+ MY +CG+++ AR+ F +M R+D +SW A++ G A+ G
Sbjct: 350 IHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV-RKDVISWTAMIGGLAKSG 408
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EA+T + EMQ P++ T+ ++L AC++ ++LE G++IH V+ +
Sbjct: 409 FGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN 468
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
LV +Y+ C ++ A +VF D++ N+MI G+ + G+EAL++F +++EG+KP
Sbjct: 469 TLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP 528
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +T+ +L AC + G+++ A + +R K G ++ Y + G +
Sbjct: 529 DKVTYINMLNACANSGSLEWAREIHTLVR-KGGFFSDTSVGNALVSTYAKCGSFSDASIV 587
Query: 637 VNRM 640
+M
Sbjct: 588 FEKM 591
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 259/576 (44%), Gaps = 81/576 (14%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
+ G N Y +L+ E +L +Q+H I++ + ++L++ Y +C
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 194 MTDARRMFDDIQ--NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ +AR+++ + + SWN +V Y+ G ++A+ + +M + + P T + L
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+C + G +IH ++ D V + MY KCG +E+AR + D+ ++++++
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVV 193
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SWT + GYA GR A E+F +M + V+
Sbjct: 194 SWTITIGGYADCGRSETAFEIFQKMEQEGVVP---------------------------- 225
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+++T +LN + + +K GK VH I + S+ V AL+ MY KCG+ + R
Sbjct: 226 ---NRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCR 282
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F ++ RD ++WN ++ G A G EEA +++MQ E P+K T+ LL AC N
Sbjct: 283 QVFEKLVN-RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNS 341
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++L GK+IH V + + ++ + AL+ +Y++C ++ A VF + DVI +MI
Sbjct: 342 AALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMI 401
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHE-------- 591
G + G EAL V+ M++ G++P+ +T+ IL AC IH+
Sbjct: 402 GGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLA 461
Query: 592 ----------------GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
G+VK A Q FD M I + Y MI Y + KE
Sbjct: 462 TDAHVGNTLVNMYSMCGSVKDARQVFDRM-----IQRDIVAYNAMIGGYAAHNLGKEALK 516
Query: 636 FVNRMP---FNPTVPMLRKIFDKCRKNGYATLGEWA 668
+R+ P + + C +G EWA
Sbjct: 517 LFDRLQEEGLKPDKVTYINMLNACANSGSL---EWA 549
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 200/391 (51%), Gaps = 8/391 (2%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C +S A+ +++ S + T + + N I Y +CG++ DAR +FD+M
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV 390
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SW AM+G ++GF L ++ +M +GV N++TY ++L + + L ++
Sbjct: 391 RKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRR 450
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +V+ G + + ++LV+ Y C + DAR++FD + ++ V++N ++ Y
Sbjct: 451 IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNL 510
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
GKEA+ +F ++ E ++P T+ N L AC+ S +IH ++ K F D V +
Sbjct: 511 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNA 570
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERN 340
L Y KCG DA + ++ +RN+ISW +I+ G A GR ++A +LF M + +
Sbjct: 571 LVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPD 630
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT-LGLILNVCAGLSEIKMGKEVH 399
++++ ++L+ + + L +E + M + I + G ++++ ++ E
Sbjct: 631 IVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQL---DEAE 687
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
I + +N + ALL R GN+ A
Sbjct: 688 ALIKTMPFQANTRIWGALLGACRIHGNVPVA 718
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 7/286 (2%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A+D V +++ ++ +L C + ++ G++VH I ++ + + NAL++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 420 MYRKCGNLRSAR-IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSK 477
MY +CG++ AR +W R SWNA++ GY + G E+A+ +MQ P +
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T + L++C + +LE G++IH ++ +V ++ +Y KC +E A VF +
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
V+ I G+ R A E+F M++EG+ P+ IT+ +L A +K
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE----LEDFVNR 639
+ S G ++K+Y + G K+ E VNR
Sbjct: 247 -KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR 291
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 317/650 (48%), Gaps = 36/650 (5%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T S L +D P + L + C S ++ + ++ I Y
Sbjct: 35 TYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYS 94
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+ AR +FD M +R+ W M+G YT+ G ++ M G+ + +T
Sbjct: 95 KFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLG 154
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L E + L + LH +++ GF +V L +S+++ Y KC + DA+ +F+ + ++
Sbjct: 155 LLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARD 211
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
+SWN +V Y GN +E + + +M + I P TF + + A + S G +HG
Sbjct: 212 VISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHG 271
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I++ E D + SL MY+KCG + A + + +++ISWT+++SG +
Sbjct: 272 HILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADM 331
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +F M + V+ A +A +L CA
Sbjct: 332 AVTVFRRMLKSRVMPSTATIAS-------------------------------VLAACAE 360
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L +G VHG+I R +I N+L+ MY KCG+L + F +MS RRD VSWNA
Sbjct: 361 LGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMS-RRDIVSWNA 419
Query: 449 VLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++G+A+ G +A+ F+EM + RP T +LL ACA+I +L QGK IH FV ++C
Sbjct: 420 IVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSC 479
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
++ ALV++Y+KC L A + F D++ +S+I G+ + +G AL ++
Sbjct: 480 LGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYS 539
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
GI+P+H+ + IL AC H G V L FF SM +GI P+LEH C++ L R
Sbjct: 540 DFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRA 599
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G ++E F RM P++ +L + D CR G LG+ AR + L P
Sbjct: 600 GRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKP 649
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 199/439 (45%), Gaps = 43/439 (9%)
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
N S+N I+ R AG + ++ + ML D P TF + + AC+ L G+
Sbjct: 10 NPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLS 69
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
H +I + D + SL Y K G + AR + D D+RN++ WT+++ Y +G
Sbjct: 70 FHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
A ++N +MR+ VT+ L +
Sbjct: 130 HDVAFSMYN-------------------------------IMRRQGIQPSSVTM---LGL 155
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+G+ E+ + +H + + + S++ ++N++L++Y KCG + A+ F ++ RD +S
Sbjct: 156 LSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALF-ELMDARDVIS 214
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN++++GYA+ G E + M+ + P + TF +L++A A S L GK +H ++
Sbjct: 215 WNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHIL 274
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R E + +L+ +Y KC + A R+F+ DVI +MI G N+ A+
Sbjct: 275 RAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVT 334
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ---FFDSMRCKYGIIPQLEHYECMI 621
VF M K + P T +L AC G+ L + R K I Q ++
Sbjct: 335 VFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQ----NSLV 390
Query: 622 KLYCRYGYMKELEDFVNRM 640
+Y + G++++ +RM
Sbjct: 391 TMYAKCGHLEQSCSVFDRM 409
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 313/599 (52%), Gaps = 34/599 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGV 139
N+ ++ K G+L +AR +FD+M ++D SW ++ Y L LF +M SG+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ + ++ ++ + LHG VK G +V + S+L+D Y K + + RR
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F ++ +N VSW I+ + AG KEA+V F +M R + ++TFA AL AC+ +
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G +IH +K F+ V +L MY KCG+LE
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLE----------------------- 269
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y ++ LF +M R+V+SW ++ + + A+ MR++ ++ T
Sbjct: 270 YGLT--------LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTF 321
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+++ CA L+ I+ G+++H I ++++ V N+++ MY KCG L S+ + F++M+
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT- 380
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RRD VSW+ ++ GY++ G EA S M+ E +P++F ++L+AC N++ LE GKQ
Sbjct: 381 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H +V+ E + AL+ +Y KC +E A R+F + + D++ +MI G+ +
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
RE +++F + + G++PD +TF G+L AC H G V L ++F++M KY I P EHY
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYG 560
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L CR G + + E + MPF+ + + CR +G G A R+ +L P
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEP 619
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 35/422 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + ++ Y K G + + R +F EMP R+ SW A++ + G+ L F +M
Sbjct: 151 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V + T+A L++ A+ L +++H +K+GF + + ++L Y KC +
Sbjct: 211 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEY 270
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+F+ + ++ VSW I+ + G + AV F +M D+ P +TFA + C+
Sbjct: 271 GLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 330
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ G Q+H +I+ + V S+ MY KCG+L + + + R+I+SW++I
Sbjct: 331 LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTI 390
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GY+ G + EA EL +SW MR +
Sbjct: 391 IAGYSQGGHVSEAFEL---------LSW----------------------MRMEGPKPTE 419
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFY 435
L +L+ C ++ ++ GK++H ++ V +AL++MY KCG++ A RI +
Sbjct: 420 FALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI--F 477
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
++ D VSW A++ GYA G S E + F ++ + RP TF +L+AC++ ++
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537
Query: 495 QG 496
G
Sbjct: 538 LG 539
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 193/428 (45%), Gaps = 47/428 (10%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
SY+ +A + CA S A+ R++ + + F+ N Y KCG L+ LF
Sbjct: 217 SYT-FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
++M RD SW ++ Q G ++ F+ M S VS N+ T+A V+ A +
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE 335
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+QLH LI+ G ++ +E+S++ Y KC +T + +F ++ ++ VSW+ I+ Y
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYS 395
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ EA + M E +P F A+ L AC ++ G Q+H ++ I E +
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
VL +L MY KCG +E+A + D + +I+SWT++++GYA G RE +LF ++P
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP--- 512
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGKEV 398
+ D VT +L+ C AGL ++
Sbjct: 513 ----------------------------RVGLRPDSVTFIGVLSACSHAGLVDL------ 538
Query: 399 HGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
GF + N S +S + ++D+ + G L A M RD V W+ +L
Sbjct: 539 -GFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597
Query: 453 YARRGQSE 460
G E
Sbjct: 598 CRVHGDVE 605
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 6/335 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ +A + CA+ I +L + ++ + + N + Y KCG L +
Sbjct: 316 PNEYT-FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSV 374
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F EM RD SW+ ++ Y+Q G EL M G + A+VL +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQLH ++ G ++ S+L++ Y KC + +A R+FD +N + VSW ++
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMING 494
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEG 277
Y G +E + +F K+ R +RP + TF L ACS G + + + K
Sbjct: 495 YAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISP 554
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEM 336
G + ++ + GRL DA +++ P R+ + W++++ + G + R +
Sbjct: 555 SKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERI 614
Query: 337 --PERNVISWNAMLAG-YTRSLLWKEALDFVFLMR 368
E N + LA Y W+EA D LM+
Sbjct: 615 LQLEPNCAGTHITLANIYASKGKWREAADIRKLMK 649
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ + +H FI + D SN L K G+L +AR F +MSQ +D++SW +++GY
Sbjct: 37 LSQNIH-FISQTDLPE----SNKQLKELVKTGHLGNARRMFDKMSQ-KDEISWTTLISGY 90
Query: 454 ARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
S EA+ F M+ E+ R F AC S + G+ +H + ++ +
Sbjct: 91 VNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNS 150
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V AL+++YTK + RVF E +V+ ++I G +EAL F M +
Sbjct: 151 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 572 EGIKPDHITFHGILLACIHEG 592
++ D TF L AC G
Sbjct: 211 SRVEYDSYTFAIALKACADSG 231
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/589 (32%), Positives = 315/589 (53%), Gaps = 16/589 (2%)
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E G + ++ + + G L + DM +G+ + TY ++L+ L +K
Sbjct: 26 EGTGKGNDGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKL 85
Query: 165 LHGLIVKRGF-CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
LH +++ F C ++ L + LV Y K + +ARR+FD++ KN VSW ++ Y
Sbjct: 86 LHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHE 145
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+G+EA+ F++M I+P +FTFA+ L AC+ L E H I+K FE + V
Sbjct: 146 HGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVFVGN 202
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L +MY K G +E AR L D+ +R+++SW ++++GY +G I +A +LF E+P+R+VI+
Sbjct: 203 GLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVIT 262
Query: 344 WNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
WN M+AGY + + A++ F + + + + G + N +K ++ +
Sbjct: 263 WNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQN-----GSVKEAFKLFQIM 317
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
N+ NA++ + + G + A F M + + VSWNA++ GY++ GQ+E A
Sbjct: 318 PER----NVISWNAVISGFAQNGQVEEALKLFKTMPEC-NVVSWNAMIAGYSQNGQAENA 372
Query: 463 MTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F +MQ + +P+ TF +L ACA ++ LEQG + H VIR+ ++ +V+ LV +
Sbjct: 373 LKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGM 432
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC +E A +VF D ++MI+G+ N +E+LE+F M+ G+KPD +TF
Sbjct: 433 YAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTF 492
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G+L AC H G V Q+FD M Y I P +EHY CMI L R G E D +N+MP
Sbjct: 493 VGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMP 552
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P M + CR + LGE A+ L LNP P + + +N +
Sbjct: 553 IKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIY 601
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 173/603 (28%), Positives = 299/603 (49%), Gaps = 55/603 (9%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
S Y L Q C ++K++ +A+ L ++++ T + + L N+ + Y K G+L +AR +FD
Sbjct: 65 STYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFD 124
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
EMP ++ SW AM+ AY ++ L F +M G+ N T+A++L + + L V
Sbjct: 125 EMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTD---LEV 181
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+ H IVK GF NV + + LVD Y K + AR +FD + ++ VSWN ++ Y+
Sbjct: 182 LGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQ 241
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G ++A+ +F ++ + D+ N T C + + E + + E + V
Sbjct: 242 NGLIEDALKLFQEIPKRDVITWN-TMMAGYAQCGDVENAVE-------LFEKMPEQNLVS 293
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++ YV+ G +++A L ERN+ISW +++SG+A +G++ EA +LF MPE NV
Sbjct: 294 WNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNV 353
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWNAM+AGY+++ + AL M+ + T ++L CA L+ ++ G E H
Sbjct: 354 VSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEV 413
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ R+ + S++ V N L+ MY KCG++ AR F +M Q +D S +A++ GYA G S+E
Sbjct: 414 VIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQ-QDSASLSAMIVGYAINGCSKE 472
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GAL 518
++ F +MQ+ +P + TF +L+AC + +++G+Q + R Y I G +
Sbjct: 473 SLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTR-FYHITPAMEHYGCM 531
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++ + C + E L+ K IKPD
Sbjct: 532 IDLLGRAGCFD----------------------------------EANDLINKMPIKPDA 557
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ-LEHYECMIKLYCRYGYMKELEDFV 637
+ +L AC N+ L + + + PQ Y + +Y G ++
Sbjct: 558 DMWGSLLSACRTHNNIDLGEKVAQHL---IALNPQNPAPYVLLSNIYAAAGRWDDIGSVR 614
Query: 638 NRM 640
NRM
Sbjct: 615 NRM 617
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 319/615 (51%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
++ N + Y + GN A +F+ M +RD S+N+++ +Q G+ + LELF M
Sbjct: 306 TYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCL 365
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + +T A++L + + L V KQ H +K G ++ILE +L+D Y KC +
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A F + +N V WNV++ Y + N E+ +F +M E I P FT+ + L CS
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + G QIH ++K F+ + V L +MY K G+L+
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLD-------------------- 525
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A ++F + E++V+SW AM+AGY + + EAL+ M+ D
Sbjct: 526 -----------HALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDN 574
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ ++ CAG+ + G+++H + YS ++ V NAL+ +Y +CG +R A F +
Sbjct: 575 IGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDK 634
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ 495
+ + D +SWN++++G+A+ G EEA++ FS+M + + FTF ++A AN+++++
Sbjct: 635 IFSK-DNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKL 693
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GKQIH +I+ ++ L+ +Y KC ++ A R F E + I N+M+ G+
Sbjct: 694 GKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQ 753
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G +AL +F MK+ G+ P+H+TF G+L AC H G V +++F SMR +G++P+ E
Sbjct: 754 HGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPE 813
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R G + FV MP P + R + C + +GE+AA L EL
Sbjct: 814 HYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLEL 873
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 874 EPKDSATYVLLSNMY 888
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 291/590 (49%), Gaps = 35/590 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C SS + KL ++ V L R ++ Y G+LD A +FDEMP
Sbjct: 71 YLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMP 130
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSK 163
R WN +L + GR L LF M V ++ TYA VLR ++ +
Sbjct: 131 VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE 190
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H + G+ ++ + + L+D Y K + A+++FD +Q +++VSW ++ +G
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EAV++F +M + P + F++ L AC+ + G Q+HG+++K F + V
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCN 310
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +Y + G N I A ++FN M +R+ +S
Sbjct: 311 ALVTLYSRLG---------------NFIP----------------AEQVFNAMLQRDEVS 339
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+N++++G ++ +AL+ M D VT+ +L+ C+ + + +GK+ H +
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ SS+I + ALLD+Y KC ++++A +F ++ + V WN +L Y E+
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS-TETENVVLWNVMLVAYGLLDNLNESF 458
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F++MQ E P++FT+ ++L C+++ +++ G+QIH V++ ++ NV L+++Y
Sbjct: 459 KIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 518
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
K L++A+++F+ DV+ +MI G+ +E+ EAL +F M+ +GI D+I F
Sbjct: 519 AKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFA 578
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ AC + Q + C G L ++ LY R G +++
Sbjct: 579 SAISACAGIQALNQGQQ-IHAQACVSGYSDDLSVGNALVSLYARCGKVRD 627
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 227/452 (50%), Gaps = 33/452 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L C+S A++ ++ S + + + L ++ Y KC ++ A F
Sbjct: 376 ASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTET 435
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WN ML AY + ++F M G+ NQ TY ++LR+ + + + +Q+
Sbjct: 436 ENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQI 495
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++K GF NV + S L+D Y K + A ++F ++ K+ VSW ++ Y
Sbjct: 496 HTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKF 555
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ +F +M + I N FA+A+ AC+ + + +G QIH + D V +L
Sbjct: 556 AEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNAL 615
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y +CG++ DA D+ ++ ISW S++SG+A SG EA LF++M
Sbjct: 616 VSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMS-------- 667
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
K ++I+ T G ++ A ++ +K+GK++H I +
Sbjct: 668 -----------------------KAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKT 704
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ S VSN L+ +Y KCGN+ A F++M + ++++SWNA+LTGY++ G +A++
Sbjct: 705 GHDSETEVSNVLITLYAKCGNIDDAERQFFEMPE-KNEISWNAMLTGYSQHGHGFKALSL 763
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F +M Q P+ TF +L+AC+++ +++G
Sbjct: 764 FEDMKQLGVLPNHVTFVGVLSACSHVGLVDEG 795
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 133/330 (40%), Gaps = 18/330 (5%)
Query: 321 AISGRIREAREL------FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+I +I++ R + F + E N A+ Y+ ++F+ LM +
Sbjct: 11 SIVNKIKQFRPVVSIFFFFQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRA 66
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ T +L+ C G ++HG I + + + + + L+D+Y G+L A F
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS-S 492
+M R WN VL + + + F M Q + +P + T+ +L C
Sbjct: 127 DEMPVRPLSC-WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVP 185
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++IH I + YE ++ L+++Y K L A +VF D + +M+ G
Sbjct: 186 FHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSG 245
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ EA+ +F M G+ P F +L AC K+ Q + K G
Sbjct: 246 LSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQ-LHGLVLKQGF-- 302
Query: 613 QLEHYEC--MIKLYCRYGYMKELEDFVNRM 640
LE Y C ++ LY R G E N M
Sbjct: 303 SLETYVCNALVTLYSRLGNFIPAEQVFNAM 332
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 311/599 (51%), Gaps = 34/599 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGV 139
N+ ++ K G+L +AR +FD+M ++D SW ++ Y L LF +M SG+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ + ++ ++ + LHG VK G +V + S+L+D Y K + + RR
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F ++ +N VSW I+ + AG KEA+V F +M R + ++TFA AL AC+ +
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G +IH +K F+ V +L MY KCG+LE
Sbjct: 233 LNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLE----------------------- 269
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y ++ LF +M R+V+SW ++ + + A+ MR++ ++ T
Sbjct: 270 YGLT--------LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTF 321
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+++ CA L+ I+ G+++H I ++++ V N+++ MY KCG L S+ + F++M+
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT- 380
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RRD VSW+ ++ GY + G EA S M+ E +P++F ++L+AC N++ LE GKQ
Sbjct: 381 RRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H +V+ E + AL+ +Y KC +E A R+F + + D++ +MI G+ +
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
RE +++F + + G++PD +TF G+L AC H G V L +F++M KY I P EHY
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYG 560
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L CR G + + E + MPF+ + + CR +G G A R+ +L P
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEP 619
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 205/422 (48%), Gaps = 35/422 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + ++ Y K G + + R +F EMP R+ SW A++ + G+ L F +M
Sbjct: 151 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V + T+A L++ A+ L +++H +K+GF + + ++L Y KC +
Sbjct: 211 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEY 270
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+F+ + ++ VSW I+ + G + AV F +M D+ P +TFA + C+
Sbjct: 271 GLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCAN 330
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ G Q+H +I+ + V S+ MY KCG+L + + + R+I+SW++I
Sbjct: 331 LARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTI 390
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GY G + EA EL +SW MR +
Sbjct: 391 IAGYXQGGHVSEAFEL---------LSW----------------------MRMEGPKPTE 419
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFY 435
L +L+ C ++ ++ GK++H ++ V +AL++MY KCG++ A RI +
Sbjct: 420 FALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRI--F 477
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
++ D VSW A++ GYA G S E + F ++ + RP TF +L+AC++ ++
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537
Query: 495 QG 496
G
Sbjct: 538 LG 539
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 193/428 (45%), Gaps = 47/428 (10%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
SY+ +A + CA S A+ R++ + + F+ N Y KCG L+ LF
Sbjct: 217 SYT-FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
++M RD SW ++ Q G ++ F+ M S VS N+ T+A V+ A +
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIE 335
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+QLH LI+ G ++ +E+S++ Y KC +T + +F ++ ++ VSW+ I+ Y
Sbjct: 336 WGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYX 395
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ EA + M E +P F A+ L AC ++ G Q+H ++ I E +
Sbjct: 396 QGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM 455
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
VL +L MY KCG +E+A + D + +I+SWT++++GYA G RE +LF ++P
Sbjct: 456 VLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP--- 512
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGKEV 398
+ D VT +L+ C AGL ++
Sbjct: 513 ----------------------------RVGLRPDSVTFIGVLSACSHAGLVDL------ 538
Query: 399 HGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
GF + N S +S + ++D+ + G L A M RD V W+ +L
Sbjct: 539 -GFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597
Query: 453 YARRGQSE 460
G E
Sbjct: 598 CRVHGDVE 605
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 6/335 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ +A + CA+ I +L + ++ + + N + Y KCG L +
Sbjct: 316 PNEYT-FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSV 374
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F EM RD SW+ ++ Y Q G EL M G + A+VL +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQLH ++ G ++ S+L++ Y KC + +A R+FD +N + VSW ++
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMING 494
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEG 277
Y G +E + +F K+ R +RP + TF L ACS G + + K
Sbjct: 495 YAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISP 554
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEM 336
G + ++ + GRL DA +++ P R+ + W++++ + G + R +
Sbjct: 555 SKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERI 614
Query: 337 --PERNVISWNAMLAG-YTRSLLWKEALDFVFLMR 368
E N + LA Y W+EA D LM+
Sbjct: 615 LQLEPNCAGTHITLANIYASKGKWREAADIRKLMK 649
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 8/201 (3%)
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ + +H FI + D SN L K G+L +AR F +MSQ +D++SW +++GY
Sbjct: 37 LSQNIH-FISQTDLPE----SNKQLKELVKTGHLGNARRMFDKMSQ-KDEISWTTLISGY 90
Query: 454 ARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
S EA+ F M+ E+ R F AC S + G+ +H + ++ +
Sbjct: 91 VNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNS 150
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V AL+++YTK + RVF E +V+ ++I G +EAL F M +
Sbjct: 151 VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 572 EGIKPDHITFHGILLACIHEG 592
++ D TF L AC G
Sbjct: 211 SRVEYDSYTFAIALKACADSG 231
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 317/618 (51%), Gaps = 36/618 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+ L I Y C A+ +F + D WN ++ A T+N LE+F +
Sbjct: 230 ITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLL 289
Query: 136 H-SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
H + + TY +VL++ + +G K +H ++K GF +V++ SS V Y KC V
Sbjct: 290 HFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVF 349
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA ++FD++ ++ SWN ++ Y G ++A+ +F +M +P + T + +C
Sbjct: 350 EDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSC 409
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L G +IH +++ F D V +L +MY KCG LE
Sbjct: 410 ARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLE------------------ 451
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
A+E+F ++ +NV+SWN+M+AGY+ K ++ M +
Sbjct: 452 -------------MAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
TL IL C+ +++GK +HG+I RN ++IFV+++L+D+Y KCGN+ SA F
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 558
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
M + + VSWN +++GY + G EA+ F++M+ +P TF ++L AC+ ++ L
Sbjct: 559 QNMP-KTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 617
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E+GK+IH F+I + EIN V GAL+++Y KC ++ A+ +F + D + SMI +
Sbjct: 618 EKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAY 677
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ + EAL++F M++ KPD +TF IL AC H G V +F+ M +YG P
Sbjct: 678 GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA 737
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMP-FNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+EHY C+I L R G ++E + + R P V +L +F C + LGE R L
Sbjct: 738 VEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLL 797
Query: 673 NELNPWAPFQFKITTNRF 690
E +P P + I +N +
Sbjct: 798 IEKDPDDPSTYIILSNMY 815
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 239/465 (51%), Gaps = 34/465 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H +P +++ Y + + C+ + + + ++++ V +++ A+ Y KC
Sbjct: 290 HFPYLKPDAFT-YPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV 348
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+DA LFDEMPERD SWN ++ Y Q+G P + LELF +M SG + +T V+ S
Sbjct: 349 FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISS 408
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A L+L K++H +V+ GF + + S+LVD YGKC + A+ +F+ IQ KN VSW
Sbjct: 409 CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSW 468
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ Y + G+ K + +F +M E IRP T ++ L ACS + G IHG II+
Sbjct: 469 NSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR 528
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
E D V SL ++Y KCG + A + + N++SW ++SGY G EA +
Sbjct: 529 NRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVI 588
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F + MRK D +T +L C+ L+ +
Sbjct: 589 FTD-------------------------------MRKAGVKPDAITFTSVLPACSQLAVL 617
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GKE+H FI + N V ALLDMY KCG + A F Q+ + RD VSW +++
Sbjct: 618 EKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE-RDFVSWTSMIAA 676
Query: 453 YARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQG 496
Y GQ+ EA+ F +MQ + +P K TF +L+AC++ +++G
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG 721
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 254/502 (50%), Gaps = 46/502 (9%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A V SA E LG K +H IV G N+ L SL++ Y C + A+ +F I+N
Sbjct: 201 ARVTAGSALEELLG--KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 258
Query: 207 KNAVS-WNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGM 264
++ WN ++ E + +F ++L ++P FT+ + L ACS L G
Sbjct: 259 PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 318
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H +IK F D VV+ S MY KC EDA L D+ ER++ SW +++S Y G
Sbjct: 319 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 378
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ +A ELF EM ++G+ D VTL +++
Sbjct: 379 QPEKALELFEEMK----------VSGFKP---------------------DSVTLTTVIS 407
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA L +++ GKE+H + R+ ++ + FVS+AL+DMY KCG L A+ F Q+ QR++ V
Sbjct: 408 SCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI-QRKNVV 466
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWN+++ GY+ +G S+ + F M E RP+ T ++L AC+ +L+ GK IH ++
Sbjct: 467 SWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYI 526
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
IRN E ++ +L+++Y KC + A VF+ +V+ N MI G+ EAL
Sbjct: 527 IRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEAL 586
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----C 619
+F M+K G+KPD ITF +L AC ++ + + + I +LE E
Sbjct: 587 VIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHN-----FIIESKLEINEVVMGA 641
Query: 620 MIKLYCRYGYMKELEDFVNRMP 641
++ +Y + G + E N++P
Sbjct: 642 LLDMYAKCGAVDEALHIFNQLP 663
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 175/370 (47%), Gaps = 30/370 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + I+ Y KCGN+ A +F MP+ + SWN M+ Y + G L +F DM
Sbjct: 535 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 594
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+GV + IT+ +VL + ++ L K++H I++ N ++ +L+D Y KC + +
Sbjct: 595 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 654
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ + ++ VSW ++ Y G EA+ +F KM + D +P TF L ACS
Sbjct: 655 ALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSH 714
Query: 257 LSSPYEG-MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW- 313
EG + +I + F+ L ++ + GRL +A +L + PD R +
Sbjct: 715 AGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLL 774
Query: 314 TSIVSGYAISGRIREARELFNEMPERN------VISWNAMLAGYTRSLLWKEALDFVFLM 367
+++ S + ++ ++ + E++ I + M A + W E +
Sbjct: 775 STLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKK---WDE-------V 824
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
RK I + LGL N G S I++GK +H F+ + S+ DM +C ++
Sbjct: 825 RKVRLKIKE--LGLKKN--PGCSWIEVGKRIHPFVVEDK-------SHPQADMIYECMSI 873
Query: 428 RSARIWFYQM 437
++ + YQ+
Sbjct: 874 LASHVEKYQV 883
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/501 (34%), Positives = 290/501 (57%), Gaps = 9/501 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ I N + WN++ R + ++ + A+ ++ M+ + P FTF L +C+
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ F+ D V SL MY + GRLEDA+ + D+ R+++S+T++
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G I A+++F+E+P ++V+SWNAM++GY + +K+AL+ M KT D+
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I+ + + SN+ + NAL+D+Y KCG + +A
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLE 494
+S +D +SWN ++ GY +EA+ F EM ET P+ T ++L ACA++ +++
Sbjct: 268 LSN-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAID 325
Query: 495 QGKQIHCFVIRNCYEINVV----CRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSM 549
G+ IH ++ + + V R +L+++Y KC ++ A +V S+ + + N+M
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAM 385
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I GF + R A ++F M+K GI+PD ITF G+L AC H G + L F SMR Y
Sbjct: 386 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYN 445
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P+LEHY CMI L G KE E+ +N MP P + + C+ +G LGE A
Sbjct: 446 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 505
Query: 670 RRLNELNPWAPFQFKITTNRF 690
++L ++ P P + + +N +
Sbjct: 506 KKLIKIEPENPGSYVLLSNIY 526
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 104/543 (19%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ +PE + WN M + + P L+L++ M G+ N T+ +L+S A+
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------------- 196
+Q+HG ++K GF ++ + +SL+ Y + + D
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 197 ------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
A++MFD+I K+ VSWN ++ Y GN K+A+ +F +M++ +++P
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T A + AC+ S G Q+H I F + ++ +L ++Y KCG +E A LL+
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY T L+KEAL
Sbjct: 268 LSNKDVISWNTLIGGY-------------------------------THMNLYKEALLLF 296
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------LL 418
M ++ + + VT+ IL CA L I +G+ +H +I + + V+NA L+
Sbjct: 297 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLI 354
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
DMY KCG++ +A + R +WNA++ G+A G++ A FS M+ P
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
TF LL+AC++ L+ G+ I +R Y I
Sbjct: 415 ITFVGLLSACSHSGMLDLGRNIF-RSMRQDYNI--------------------------- 446
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ L+ C +LG H+ +EA E+ M E PD + + +L AC GN++L
Sbjct: 447 TPKLEHYGCMIDLLG--HSGLFKEAEEMINTMPME---PDGVIWCSLLKACKIHGNLELG 501
Query: 598 LQF 600
F
Sbjct: 502 ESF 504
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 214/499 (42%), Gaps = 93/499 (18%)
Query: 20 PTPSKTLTKTI-SGHLKSDEPVS----------------YSLYAHLFQLCASSKAIVEAR 62
P P++ + + GH S +PVS + + L + CA SK E +
Sbjct: 36 PEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQ 95
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA------------------------RG 98
++ +++ +++ I Y + G L+DA RG
Sbjct: 96 QIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRG 155
Query: 99 -------LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+FDE+P +D SWNAM+ Y + G + LELF +M + V ++ T A V+
Sbjct: 156 YIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVS 215
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ A+ + + +Q+H I GF N+ + ++L+D Y KC + A + + + NK+ +S
Sbjct: 216 ACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVIS 275
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y KEA+++F +MLR P + T + L AC+ L + G IH +
Sbjct: 276 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH---V 332
Query: 272 KIDFEGDDVVL-------GSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAIS 323
ID + VV+ SL +MY KCG ++ A + D R++ +W +++ G+A+
Sbjct: 333 YIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMH 392
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
GR A ++F+ MRK + D +T +L
Sbjct: 393 GRANAAFDIFSR-------------------------------MRKNGIEPDDITFVGLL 421
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRR 441
+ C+ + +G+ + + R DY+ + + ++D+ G + A M
Sbjct: 422 SACSHSGMLDLGRNIFRSM-RQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEP 480
Query: 442 DKVSWNAVLTGYARRGQSE 460
D V W ++L G E
Sbjct: 481 DGVIWCSLLKACKIHGNLE 499
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 172/396 (43%), Gaps = 41/396 (10%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K + KT ++K DE S A + CA S +I R++ S + + ++N
Sbjct: 196 KEMMKT---NVKPDE----STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNAL 248
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y KCG ++ A L + + +D SWN ++G YT L LF +M SG + N
Sbjct: 249 IDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 308
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI-----LESSLVDAYGKCMVMTDAR 198
+T ++L + A + + + +H I K+ G V+ L +SL+D Y KC + A
Sbjct: 309 VTMLSILPACAHLGAIDIGRWIHVYIDKK-LKGVVVTNASSLRTSLIDMYAKCGDIDAAP 367
Query: 199 RMFDDIQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++ D N++ +WN ++ + + G A +F +M + I P + TF L ACS
Sbjct: 368 QVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS-- 425
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVL------GSLTEMYVKCGRLEDARGLLD-QPDERNI 310
+ GM G I D + G + ++ G ++A +++ P E +
Sbjct: 426 ---HSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDG 482
Query: 311 ISWTSIVSGYAISGRIRE----ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ W S++ I G + A++L PE N S+ + Y + W E L
Sbjct: 483 VIWCSLLKACKIHGNLELGESFAKKLIKIEPE-NPGSYVLLSNIYATAGKWNEVXKIRTL 541
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ G+ V G S I++ VH FI
Sbjct: 542 LNDK---------GMKKKV-PGCSSIEIDSVVHEFI 567
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
L YAI VF+ + +I N M G + AL+++ +M G+ P+ TF +L +
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C K Q + K G L + +I +Y + G +++ + +R V
Sbjct: 85 CAKSKTFKEGQQIHGHV-LKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVS 143
Query: 648 MLRKIFDKCRKNGYATLG--EWAARRLNEL 675
I GYA+ G E A + +E+
Sbjct: 144 YTALI------TGYASRGYIESAQKMFDEI 167
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/649 (28%), Positives = 327/649 (50%), Gaps = 36/649 (5%)
Query: 33 HLK-SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
HLK S+ S Y L CA+ +++ A+K+ +++ P + L N I YGKCG
Sbjct: 149 HLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCG 208
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++ DAR +FD M + SW +M+ Y+QNG + +++ M SG +Q+T+ +V++
Sbjct: 209 SMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIK 268
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ ++ + +QLH ++K F ++ +++L+ Y + A +F I K+ +S
Sbjct: 269 ACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLIS 328
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVI 270
W ++ Y+ G EA+ +F +LR+ +P F F + ACS L G Q+HG+
Sbjct: 329 WGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMC 388
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K RN+ + S+ YA G + A+
Sbjct: 389 VKFGLR-------------------------------RNVFAGCSLCDMYAKFGFLPSAK 417
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
F ++ +++SWNA++A + + EA+DF M D +T +L C
Sbjct: 418 MAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPV 477
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G+++H +I + + I V N+LL MY KC +L A F +S+ + VSWNA+L
Sbjct: 478 RLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAIL 537
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+ ++ Q E + EM + +P T TLL CA ++SL G Q+HC+ I++
Sbjct: 538 SACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLI 597
Query: 510 INV-VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
++V VC G L+++Y KC L++A VF + +LD++ +S+I+G+ G EAL +F +
Sbjct: 598 LDVSVCNG-LIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRI 656
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M G++P+ +T+ G L AC H G V+ + + SM ++GI P EH+ C++ L R G
Sbjct: 657 MTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAG 716
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ E E F+ + + + + + C+ + + E A + +L+P
Sbjct: 717 CLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDP 765
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 146/287 (50%), Gaps = 22/287 (7%)
Query: 357 WKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+KEAL+ F F ++ + + T ++ CA + K++H + +++Y +I + N
Sbjct: 139 YKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQN 198
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR- 474
+++MY KCG+++ AR F M Q + VSW ++++GY++ GQ+ +A+ + +M +
Sbjct: 199 HMINMYGKCGSMKDARKVFDTM-QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQF 257
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P + TF +++ AC ++ G+Q+H VI++ + ++ + AL+ +YT +E+A V
Sbjct: 258 PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNV 317
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLAC----- 588
F + D+I +MI G+ EAL +F L+++ +P+ F + AC
Sbjct: 318 FTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLE 377
Query: 589 ------IHEGNVKLALQ-------FFDSMRCKYGIIPQLEHYECMIK 622
+H VK L+ M K+G +P + C IK
Sbjct: 378 LEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKF---TFETLLAACANISSLEQGKQIHCFV 503
N+ + ++ +EA+ +F + + S F T+ +L+ ACAN SL+ K+IH V
Sbjct: 127 NSYIIFLCKQHHYKEALEAF-DFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHV 185
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+++ Y+ +++ + ++ +Y KC ++ A +VF +V+ SMI G+ N + +A+
Sbjct: 186 LKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAI 245
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYECMIK 622
++ M + G PD +TF ++ AC G++ L Q ++ +G L +I
Sbjct: 246 IMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFG--HHLTSQNALIS 303
Query: 623 LYCRYGYMKELEDFVNRMP 641
+Y +G ++ + R+P
Sbjct: 304 MYTNFGQIEHASNVFTRIP 322
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 326/627 (51%), Gaps = 47/627 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY-----TQNGFPGRTLELFL 132
FL N + Y KCG+L AR +FD PERD +WNA+LGAY + +G L LF
Sbjct: 113 FLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFR 172
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ S S ++T A VL+ L ++ +HG +K G +V + +LV+ Y KC
Sbjct: 173 LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 232
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
M DAR +FD ++ ++ V WN++++ Y+ G KEA +F + R +RP F+ L
Sbjct: 233 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292
Query: 253 ACSFLSSP--YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C + + G Q+HG+ +K + D V SL MY K G
Sbjct: 293 GCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG----------------- 335
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRK 369
Y ARE+FN+M ++ISWN+M++ +S L +E+++ F+ L+ +
Sbjct: 336 -------CAYF-------AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 381
Query: 370 TTK----DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
K + +TL C L + GK++H + + S++ V++ +LDMY KCG
Sbjct: 382 GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLL 484
++ +A I F +S D V+W ++++G G ++A+ + M Q P ++TF TL+
Sbjct: 442 DMVNAGIVFNYISAP-DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 500
Query: 485 AACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
A + +++LEQG+Q+H VI+ +C V +LV++Y KC +E A R+FK+ + ++
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSDPFVGT-SLVDMYAKCGNIEDAYRLFKKMNVRNI 559
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ N+M++G + EA+ +F MK GI+PD ++F GIL AC H G A ++ S
Sbjct: 560 ALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHS 619
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT 663
M YGI P++EHY C++ R G ++E + + MPF + + R + CR G
Sbjct: 620 MPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 679
Query: 664 LGEWAARRLNELNPWAPFQFKITTNRF 690
G+ A RL L P+ + + +N +
Sbjct: 680 TGKRVAARLFALEPFDSAAYVLLSNIY 706
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 196/722 (27%), Positives = 354/722 (49%), Gaps = 78/722 (10%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A+L Q C ++KA + + + + L FL N IE Y KC ++ A +FD +P
Sbjct: 10 ANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPH 69
Query: 106 RDGGSWNAMLGAYTQN-------------------------------GFPGRTLELFLDM 134
++ SWNA+L AY + G+ + L+ + +
Sbjct: 70 KNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSV 129
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
GV + IT+A V + L+ ++ HG+++K G N+ + ++L+ Y KC +
Sbjct: 130 MLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLN 189
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA R+F DI N V++ ++ KEA +F MLR+ IR + + ++ L C
Sbjct: 190 ADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVC 249
Query: 255 S----------FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ +S+ +G Q+H + +K+ FE D + SL +MY K G ++ A +
Sbjct: 250 AKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVN 309
Query: 305 PDERNIISWTSIVSGYA-----------------------------------ISGRIREA 329
+ +++SW +++GY SG +R
Sbjct: 310 LNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTG 369
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R++F+ MP ++ SWNA+L+GY ++ +EA++ M+ + D+ TL +IL+ CA L
Sbjct: 370 RQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAEL 429
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++ GKEVH + + +++V+++L+++Y KCG + ++ F ++ + D V WN++
Sbjct: 430 GFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPEL-DVVCWNSM 488
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
L G++ ++A++ F +M Q PS+F+F T++++CA +SSL QG+Q H ++++ +
Sbjct: 489 LAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGF 548
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
++ +L+E+Y KC + A F + + N MI G+ N G AL ++
Sbjct: 549 LDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYND 608
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M G KPD IT+ +L AC H V L+ F++M KYG++P++ HY C+I R G
Sbjct: 609 MISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAG 668
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
E+E ++ MP + + CR + +L + AA L L+P + + N
Sbjct: 669 RFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVLLAN 728
Query: 689 RF 690
+
Sbjct: 729 MY 730
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 241/509 (47%), Gaps = 55/509 (10%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S+ +A +F C S R+ ++ ++++N + Y KCG DA +F
Sbjct: 137 SHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVF 196
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE-ELEL 159
++PE + ++ M+G Q ELF M G+ + ++ +++L A+ E ++
Sbjct: 197 RDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDV 256
Query: 160 G---------VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
G KQ+H L VK GF ++ L +SL+D Y K M A ++F ++ + V
Sbjct: 257 GPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVV 316
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SWN+++ Y N ++A +M + P + T+ N L AC G QI +
Sbjct: 317 SWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCM 376
Query: 271 I----------------------------KIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
K+ F+ +L + C L G L
Sbjct: 377 PCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAEL----GFL 432
Query: 303 DQPDERNIISW-----------TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
+ E + S +S+++ Y+ G++ ++ +F+++PE +V+ WN+MLAG+
Sbjct: 433 EAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGF 492
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ + L ++AL F MR+ + + +++ CA LS + G++ H I ++ + +I
Sbjct: 493 SINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDI 552
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-Q 470
FV ++L++MY KCG++ AR +F M R+ V+WN ++ GYA+ G A+ +++M
Sbjct: 553 FVGSSLIEMYCKCGDVNGARCFFDVMPG-RNTVTWNEMIHGYAQNGDGHNALCLYNDMIS 611
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQI 499
+P T+ +L AC++ + +++G +I
Sbjct: 612 SGEKPDDITYVAVLTACSHSALVDEGLEI 640
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 201/437 (45%), Gaps = 20/437 (4%)
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
+ AN + C + G +H + ++ D + E+Y KC + A + D
Sbjct: 6 SLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFD 65
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+NI SW +I++ Y + ++ A LF +MP+RN +S N +++ R ++ALD
Sbjct: 66 NIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDT 125
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+ +T + + C L + G+ HG + + SNI+V NALL MY K
Sbjct: 126 YDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAK 185
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG L + + ++ ++V++ ++ G A+ Q +EA F M + R + +
Sbjct: 186 CG-LNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSS 244
Query: 483 LLAACAN----------ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+L CA IS+ QGKQ+H ++ +E ++ +L+++Y K ++ A
Sbjct: 245 MLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAE 304
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF + V+ N MI G+ + +A E M+ +G +PD +T+ +L AC+ G
Sbjct: 305 KVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSG 364
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF---NPTVPML 649
+V+ Q FD M C P L + ++ Y + +E + +M F +P L
Sbjct: 365 DVRTGRQIFDCMPC-----PSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTL 419
Query: 650 RKIFDKCRKNGYATLGE 666
I C + G+ G+
Sbjct: 420 AVILSSCAELGFLEAGK 436
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + I Y KCG ++ ++ +F ++PE D WN+ML ++ N L F M
Sbjct: 451 VYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQ 510
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G ++ ++A V+ S A+ L +Q H IVK GF ++ + SSL++ Y KC +
Sbjct: 511 LGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNG 570
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR FD + +N V+WN ++ Y G+G A+ ++ M+ +P + T+ L ACS
Sbjct: 571 ARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSH 630
Query: 257 LSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDER 308
+ EG++I +GV+ K+ + + + GR + +LD P +
Sbjct: 631 SALVDEGLEIFNAMLQKYGVVPKVAH------YTCIIDCLSRAGRFNEVEVILDAMPCKD 684
Query: 309 NIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ + W ++S I + R A EL+ P+ N S+ + Y+ W +A
Sbjct: 685 DAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQ-NSASYVLLANMYSSLGKWDDA 739
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +S +A + CA ++ + ++ + +V +F+ + IE Y KCG+++ AR
Sbjct: 515 PSEFS-FATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARC 573
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
FD MP R+ +WN M+ Y QNG L L+ DM SG + ITY VL + +
Sbjct: 574 FFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSAL 633
Query: 159 LGVSKQL-HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIV 216
+ ++ + ++ K G V + ++D + + + D + K +AV W V++
Sbjct: 634 VDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVL 693
Query: 217 RRYLVAGN 224
+ N
Sbjct: 694 SSCRIHAN 701
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/608 (30%), Positives = 310/608 (50%), Gaps = 33/608 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC LD A +F EMPER+ W+A++ Y QN L+LF DM G+ +Q
Sbjct: 180 VDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
TYA+V RS A + QLHG +K F + I+ ++ +D Y KC M+DA ++F+
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNT 299
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N S+N I+ Y G +A+ +F + R + + + AL ACS + EG
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEG 359
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+HG+ +K + V ++ +MY KCG L
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGAL---------------------------- 391
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F++M R+ +SWNA++A + ++ + L M ++T + D T G ++
Sbjct: 392 ---VEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVV 448
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAG + G E+HG I ++ + FV +AL+DMY KCG L A + + +
Sbjct: 449 KACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEK-IHDRLEEKTT 507
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWN++++G++ + QSE A FS+M + P FT+ T+L CAN++++E GKQIH
Sbjct: 508 VSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQ 567
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ +V LV++Y+KC ++ + +F+++ D + ++MI + ++ G +A
Sbjct: 568 ILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQA 627
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+++F M+ +KP+H F +L AC H G V L +F M+ YG+ P +EHY CM+
Sbjct: 628 IKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVD 687
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
L R + E + M F + R + C+ G + E A L +L+P
Sbjct: 688 LLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSA 747
Query: 683 FKITTNRF 690
+ + N +
Sbjct: 748 YVLLANVY 755
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/635 (26%), Positives = 296/635 (46%), Gaps = 65/635 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESN---------------LVTFY----------- 72
P ++H+ Q C++ KA+ ++ + LV FY
Sbjct: 3 PTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFK 62
Query: 73 -----PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
P V N I Y + GN+ A+ LFD MPERD SWN++L Y NG ++
Sbjct: 63 VFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKS 122
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
+E+F+ M + + T++ VL++ + + G+ Q+H L ++ GF +V+ S+LVD
Sbjct: 123 IEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A R+F ++ +N V W+ ++ Y+ E + +F ML+ + T+
Sbjct: 183 YSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
A+ +C+ LS+ G Q+HG +K DF D ++ + +MY KC R+ DA
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDA--------- 293
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
W ++FN +P S+NA++ GY R +AL+ +
Sbjct: 294 -----W-----------------KVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSL 331
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
++T D+++L L C+ + G ++HG + NI V+N +LDMY KCG L
Sbjct: 332 QRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAA 486
A F M +RRD VSWNA++ + + + + ++ F M T P FT+ +++ A
Sbjct: 392 VEACTIFDDM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA +L G +IH ++++ ++ ALV++Y KC L A ++ +
Sbjct: 451 CAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSW 510
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NS+I GF ++ A F M + G+ PD+ T+ +L C + ++L Q +
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQI-L 569
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
K + + ++ +Y + G M++ + P
Sbjct: 570 KLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP 604
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 152/261 (58%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ YGKCG L +A +FD+M RD SWNA++ A+ QN +TL LF+ M S +
Sbjct: 379 NTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ TY +V+++ A + L ++HG IVK G + + S+LVD YGKC ++ +A ++
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
D ++ K VSWN I+ + + A F +ML + P NFT+A L C+ +++
Sbjct: 499 HDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI 558
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G QIH I+K++ D + +L +MY KCG ++D+R + ++ +R+ ++W++++ Y
Sbjct: 559 ELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAY 618
Query: 321 AISGRIREARELFNEMPERNV 341
A G +A +LF EM NV
Sbjct: 619 AYHGHGEQAIKLFEEMQLLNV 639
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 178/386 (46%), Gaps = 21/386 (5%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
KTL+ +S + EP ++ Y + + CA +A+ ++ +V F+ +
Sbjct: 424 KTLSLFVSMLRSTMEPDDFT-YGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSAL 482
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKCG L +A + D + E+ SWN+++ ++ F M GV +
Sbjct: 483 VDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDN 542
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
TYA VL A + + KQ+H I+K +V + S+LVD Y KC M D+R MF+
Sbjct: 543 FTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEK 602
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++ V+W+ ++ Y G+G++A+ +F +M +++P + F + L AC+ + +G
Sbjct: 603 TPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKG 662
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR---LEDARGLLDQPD-ERNIISWTSIVSG 319
+ H I G D + + M GR + +A L++ E + + W +++S
Sbjct: 663 L--HYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSN 720
Query: 320 YAISGRIREARELFNEMPERNVISWNA--MLAG-YTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ G + A + FN + + + +A +LA Y +W E +M+
Sbjct: 721 CKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCK----- 775
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFI 402
L G S I++ EVH F+
Sbjct: 776 ------LKKEPGCSWIEVRDEVHTFL 795
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 314/598 (52%), Gaps = 20/598 (3%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ GF L+L+ M G + T+ VL++ E +H ++
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKE 227
GF NV + + LV YG+C +AR++FD+++ + + VSWN IV Y+ G+
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 228 AVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A+ MF +M + IRP + N L AC+ + + G Q+HG ++ D V ++
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVI 342
+MY KCG +E+A + ++ ++++SW ++V+GY+ GR +A LF ++ E NV+
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF- 401
+W+A++AGY + L EALD MR + + VTL +L+ CA + GKE H
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393
Query: 402 ------IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYA 454
+ ND ++ V NAL+DMY KC + ++AR F + + R V+W ++ G A
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453
Query: 455 RRGQSEEAMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ G++ EA+ FS+M P+ FT L ACA + +L G+QIH +V+RN +E
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513
Query: 512 VV-CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ L+++Y+K ++ A VF + + S++ G+ + RG EAL++F M+
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
K G+ PD +TF +L AC H G V + +F+ M +G++P EHY CM+ L R G +
Sbjct: 574 KVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
E + + MP PT + + CR LGE+AA +L EL + + +N
Sbjct: 634 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 691
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 242/498 (48%), Gaps = 89/498 (17%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ AS A+V A E N VF+ N + YG+CG ++AR +FDEM ER
Sbjct: 142 FRCGASVHAVVFASGFEWN---------VFVGNGLVSMYGRCGAWENARQVFDEMRERGV 192
Query: 109 G---SWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQ 164
G SWN+++ AY Q G R +++F M G+ + ++ NVL + A KQ
Sbjct: 193 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 252
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++ G +V + +++VD Y KC +M +A ++F+ ++ K+ VSWN +V Y G
Sbjct: 253 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 312
Query: 225 GKEAVVMFFKMLREDI----------------RPLNF-------------------TFAN 249
+A+ +F K+ E I R L F T +
Sbjct: 313 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVS 372
Query: 250 ALFACSFLSSPYEGMQIHGVIIKI------DFEGDDV-VLGSLTEMYVKCGRLEDARGLL 302
L C+ + G + H IK + GDD+ V+ +L +MY KC + AR +
Sbjct: 373 LLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 432
Query: 303 D--QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
D P +R++++WT ++ G A G EA ELF++M + +
Sbjct: 433 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPD-------------------- 472
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLD 419
+FV + T+ L CA L ++ G+++H ++ RN + S+ +FV+N L+D
Sbjct: 473 -NFVM--------PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
MY K G++ +AR+ F M Q R+ VSW +++TGY G+ EEA+ F EMQ P
Sbjct: 524 MYSKSGDVDAARVVFDNMHQ-RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGV 582
Query: 479 TFETLLAACANISSLEQG 496
TF +L AC++ ++QG
Sbjct: 583 TFVVVLYACSHSGMVDQG 600
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 318/601 (52%), Gaps = 33/601 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + I+ Y + G ++DAR LFD+MP +D WN ML + + G P +++F DM +
Sbjct: 8 FVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNC 67
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
N IT+A+VL A E QLHGL++ GF + ++ ++LV Y K ++DA
Sbjct: 68 QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDA 127
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F+ + + N V+WN ++ ++ G EA ++F +M+ + P + TFA+ L + +
Sbjct: 128 LKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTES 187
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+S +G +IHG I++ D + +L ++Y KC + A + Q +I+ T+I+
Sbjct: 188 ASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAII 247
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGY ++G +A E+F + E +S NA V
Sbjct: 248 SGYVLNGLNNDALEIFRWLLEEK-MSPNA------------------------------V 276
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL +L CAGL+ + +GKE+H I ++ V +A++DMY KCG L A F +M
Sbjct: 277 TLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRM 336
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQG 496
++ D V WNA++T ++ G+ +EA+ F +M E + L+ACAN+ +L G
Sbjct: 337 PEK-DAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHG 395
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K IH F+I+ ++ V AL+++Y KC L A VF + + NS+I + +
Sbjct: 396 KAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSH 455
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
+L +F M ++GI+PDH+TF IL AC H G V +Q+F M +YGI ++EH
Sbjct: 456 GHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEH 515
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y C++ L+ R G + E + + MPF+P + + CR +G L E A+R L +L+
Sbjct: 516 YACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLD 575
Query: 677 P 677
P
Sbjct: 576 P 576
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 159/556 (28%), Positives = 264/556 (47%), Gaps = 70/556 (12%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+A + +CAS +L +++ F+ P + N + Y K G L DA LF+
Sbjct: 76 FASVLSICASEALSEFGNQLHGLVISCGFHFDP--LVANALVAMYSKFGQLSDALKLFNT 133
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+ + +WN M+ + QNGF LF +M +GVS + IT+A+ L S E L
Sbjct: 134 MPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQG 193
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++HG I++ G +V L+S+L+D Y KC + A ++F N + V I+ Y++
Sbjct: 194 KEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLN 253
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +A+ +F +L E + P T A+ L AC+ L++ G ++H I+K + V
Sbjct: 254 GLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVG 313
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
++ +MY KCGRL+ A + + E++ + W +I++ + +G+ +EA +LF +M
Sbjct: 314 SAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMG----- 368
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+E L + D V++ L+ CA L + GK +H F+
Sbjct: 369 ---------------REGLSY-----------DCVSISAALSACANLPALHHGKAIHSFM 402
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ + S +F +AL+DMY KCGNL AR F M + +++VSWN+++ Y G E +
Sbjct: 403 IKGAFDSEVFAESALIDMYGKCGNLSVARCVF-DMMREKNEVSWNSIIAAYGSHGHLEVS 461
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F +M + +P TF T+L+AC + +++G Q
Sbjct: 462 LALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ----------------------- 498
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y +C EY I E + C + G R E F +K PD +
Sbjct: 499 YFRCMTEEYGIPARMEHYA-----CIVDLFG-----RAGRLNEAFETIKNMPFSPDDGVW 548
Query: 582 HGILLACIHEGNVKLA 597
+L AC GNV+LA
Sbjct: 549 GTLLGACRVHGNVELA 564
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ ++ +L+++Y + C+E A R+F + + D ++ N M+ GF A++VF
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD-SMRCKYGIIPQLEHYECMIKLYCR 626
M+ KP+ ITF +L C E + Q + C + P + + ++ +Y +
Sbjct: 63 DMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMYSK 120
Query: 627 YGYMKELEDFVNRMP 641
+G + + N MP
Sbjct: 121 FGQLSDALKLFNTMP 135
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 335/659 (50%), Gaps = 34/659 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H P Y L + + C + + R + + + + N I Y + G+
Sbjct: 135 HCSGVVPTPYVL-SSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGS 193
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L A +F EMP D ++N ++ + Q G LE+F +M SG + + +T A++L +
Sbjct: 194 LSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAA 253
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A +L KQLH ++K G + I+E SL+D Y KC V+ +A +F N V W
Sbjct: 254 CASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLW 313
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N+++ Y + ++ +F +M+ +RP FT+ L C++ G QIH + IK
Sbjct: 314 NLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIK 373
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
FE D V G L +MY K G L+ AR RI E E
Sbjct: 374 TGFESDMYVSGVLIDMYSKYGWLDKAR-------------------------RILEVLE- 407
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
++V+SW +M+AGY + KEAL+ M+ D + L ++ CAG+ +
Sbjct: 408 -----AKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAM 462
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G+++H ++ + YS+++ + NAL+++Y +CG + A ++ + +DK++WN +++G
Sbjct: 463 RQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEA-FSLFEAIEHKDKITWNGMVSG 521
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+A+ G EEA+ F +M Q + + FTF + ++A AN++ ++QGKQIH VI+
Sbjct: 522 FAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSE 581
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
AL+ +Y KC +E A F E S + + N++I + G EAL++F MK+
Sbjct: 582 TEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQ 641
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
EG+KP+ +TF G+L AC H G V+ L +F SM ++GI P+ +HY C++ + R G +
Sbjct: 642 EGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLD 701
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
FV MP + + R + CR + +GE AA+ L EL P + + +N +
Sbjct: 702 RARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAY 760
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 165/629 (26%), Positives = 297/629 (47%), Gaps = 53/629 (8%)
Query: 23 SKTLTKTISGHLKSDEPVSY-SLYAHLFQLCASSKAIVEARKLES--NLVTFYPTPPVFL 79
+ +L K+++G L ++P SL+A + C ++ A L V +P PV +
Sbjct: 6 AASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPV-I 64
Query: 80 LNRAIEC---------------YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP 124
+AI C Y K G + AR +F+++ RD SW AML Y +NG
Sbjct: 65 HAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLG 124
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
+ L+ M+ SGV ++VL + + + +H + K+G C ++ ++L
Sbjct: 125 EEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNAL 184
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+ Y + ++ A R+F ++ + V++N ++ R+ GNG+ A+ +F +M P
Sbjct: 185 IALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDC 244
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T A+ L AC+ + +G Q+H ++K D ++ GSL ++YVKCG + +A +
Sbjct: 245 VTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
D N++ W ++ Y + ++ +LF + M+A R
Sbjct: 305 GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQ-----------MVAAGVRP---------- 343
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
++ T +L C EI +G+++H + + S+++VS L+DMY K
Sbjct: 344 ----------NEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKY 393
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETL 483
G L AR ++ + +D VSW +++ GY + +EA+ +F +MQ + P +
Sbjct: 394 GWLDKARR-ILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASA 452
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
++ACA I ++ QG+QIH V + Y +V ALV +Y +C + A +F+ D
Sbjct: 453 ISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDK 512
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
I N M+ GF + EALEVF M + G+K + TF + A + ++K Q +
Sbjct: 513 ITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHAT 572
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ K G + E +I LY + G +++
Sbjct: 573 V-IKTGCTSETEVANALISLYGKCGSIED 600
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 315/604 (52%), Gaps = 35/604 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + + Y KC +D A+ +F+ + ER+ WNAMLG + QNG +E F M
Sbjct: 344 VYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKR 403
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G ++ T+ ++ + A L QLH +++K F N+ + ++LVD Y K + +
Sbjct: 404 HGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKE 463
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR+ F+ ++ + VSWN I+ Y+ EA MF +M+ + P + A+ + AC+
Sbjct: 464 ARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ +G Q H +++K+ + SL +MYVKCG
Sbjct: 524 VKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGV---------------------- 561
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ AR++F MP RNV+S NA++AGYT S L +EA+ ++ +
Sbjct: 562 ---------VLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTE 611
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT +L+ C G + +G+++HG + + + SS+ V +LL MY + F
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFS 671
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
++ + V W A+++GYA++ E+A+ + M+ + P + TF ++L ACA +SSL+
Sbjct: 672 ELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQ 731
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC-NSMILGF 553
G+++H + + ++ + +L+++Y KC ++ +++VF E + +I NSMI+G
Sbjct: 732 TGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGL 791
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N EALE+F M+++ I PD +TF G+L AC H G V + FD M Y + P+
Sbjct: 792 AKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPR 851
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++H CM+ + R+G++ E E+F+N++ + + CRK+G G+ AA +L
Sbjct: 852 VDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLM 911
Query: 674 ELNP 677
EL P
Sbjct: 912 ELKP 915
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 181/647 (27%), Positives = 296/647 (45%), Gaps = 85/647 (13%)
Query: 14 SKSSPKPTPSKTLTKTISGH---LKSDEPVSYSLYAH-LF--QLCASSKAIVEARKLESN 67
S S P P++ L K +S H L+ + AH LF + A +A+ A+ + S
Sbjct: 7 SNSIPNCVPNQQLVKILSPHSEFLQICLQHCRRIQAHNLFNEKPKAVLQALSTAKVIHSK 66
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
+ L N ++ Y KCGN+D A+ F + ++D +WN++L Y +G
Sbjct: 67 SLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATV 126
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
++ F+ M + GV N+ T+A VL + + ++ KQ+H + K GF + L+D
Sbjct: 127 VQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDM 186
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + DAR +FD N + VSW ++ Y+ G EAV +F KM R P
Sbjct: 187 YAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP----- 241
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
D + L ++ YV GRL DAR L Q
Sbjct: 242 ------------------------------DQIALVTVINAYVALGRLADARKLFTQIPN 271
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
N+++W ++SG+A G F E EA+ F +
Sbjct: 272 PNVVAWNVMISGHAKRG--------FAE-----------------------EAISFFLEL 300
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+KT + +LG +L+ A LS + G VH + N++V +AL++MY KC +
Sbjct: 301 KKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKM 360
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAA 486
+A+ F + + R+ V WNA+L G+A+ G ++E M FS M+ +P +FTF ++ +A
Sbjct: 361 DAAKQVFNSLGE-RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSA 419
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA++ L+ G Q+H +I+N + N+ ALV++Y K L+ A + F+ D +
Sbjct: 420 CASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSW 479
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
N++I+G+ E EA +F M G+ PD ++ I+ AC NVK +F +C
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC---ANVK---EFKQGQQC 533
Query: 607 -----KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
K G+ +I +Y + G + D MP+ V +
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSI 580
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 167/617 (27%), Positives = 277/617 (44%), Gaps = 57/617 (9%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
+EA K+ + P L I Y G L DAR LF ++P + +WN M+ +
Sbjct: 225 MEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ GF + FL++ +G+ A + + +VL + A L +H +K G NV
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNV 344
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ S+LV+ Y KC M A+++F+ + +N V WN ++ + G +E + F M R
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRH 404
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+P FTF + AC+ L G Q+H V+IK F + V +L +MY K G L++A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEA 464
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R + + +SW +I+ GY EA +F M V+
Sbjct: 465 RKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLP--------------- 509
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
D+V+L I++ CA + E K G++ H + + ++ ++L+
Sbjct: 510 ----------------DEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLI 553
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
DMY KCG + +AR FY M R+ VS NA++ GY EEA+ F E+Q +P++
Sbjct: 554 DMYVKCGVVLAARDVFYSMP-YRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTE 611
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYAIRVF 535
TF LL C L G+QIH V++ + +VC L C+ + F
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLL--------CMYMNSQRF 663
Query: 536 KESSSL--------DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+S +L +++ ++I G+ +AL+ + M+ + I PD TF +L A
Sbjct: 664 ADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRA 723
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRMPFNPT 645
C +++ Q S+ G ++ C +I +Y + G +K + MP +
Sbjct: 724 CAGMSSLQTG-QEVHSLIFHTGF--NMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNS 780
Query: 646 VPMLRKIFDKCRKNGYA 662
V + KNGYA
Sbjct: 781 VISWNSMIVGLAKNGYA 797
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 232/465 (49%), Gaps = 35/465 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ +F CAS + +L + ++ T +F+ N ++ Y K G L +AR F+ M
Sbjct: 413 FTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMK 472
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
D SWNA++ Y Q + +F M +GV ++++ A+++ + A E +Q
Sbjct: 473 IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQ 532
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H L+VK G + SSL+D Y KC V+ AR +F + +N VS N ++ Y ++ +
Sbjct: 533 CHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMS-H 591
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF-EGDDVVLG 283
+EA+ +F ++ ++P TFA L C G QIHG ++K F ++V
Sbjct: 592 LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCV 651
Query: 284 SLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL MY+ R D+ L + + ++ WT+++SGYA +A + + M N++
Sbjct: 652 SLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
DQ T +L CAG+S ++ G+EVH I
Sbjct: 712 P-------------------------------DQATFASVLRACAGMSSLQTGQEVHSLI 740
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
++ + ++L+DMY KCG+++ + F++M +R +SWN+++ G A+ G +EEA
Sbjct: 741 FHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEA 800
Query: 463 MTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+ F +M+ ++ P + TF +L+AC++ + +G+++ ++ N
Sbjct: 801 LEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNN 845
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 183/597 (30%), Positives = 305/597 (51%), Gaps = 33/597 (5%)
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
+ + + K G++++A +F+ + ++ ++ ML Y +N L M + V
Sbjct: 86 KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +L+ + +L K++HG ++ F NV + +V+ Y KC + DA +MF
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + ++ VSWN I+ + G K+A+ + +M E RP + T L A + +
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G IHG I+ F + +L +MY KCG +E AR + D D++ ++SW S++ GY
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G +A +F +M E + D VT+
Sbjct: 326 QNGEPEKAIAVFEKMLEEGI-------------------------------DPTGVTIME 354
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
L+ CA L +++ GK VH F+ + + S+I V N+L+ MY KC + A F ++ R
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT 414
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIH 500
VSWNA++ GYA+ G+ EA+ FSEM+ +P FT +++ A A +S K IH
Sbjct: 415 -HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+IR+C + N+ ALV++Y+KC + A ++F S VI N+MI G+ + GR
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL++F MKK ++P+ IT+ ++ AC H G V L+ F SM+ YG+ P ++HY M
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G +KE DF+ MP +P + + + C+ + +GE AA++L ELNP
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNP 650
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 276/561 (49%), Gaps = 39/561 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+PV Y+ + +L ++C + + +++ L+T VF + + Y KC +DDA
Sbjct: 144 KPVVYN-FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FD MPERD SWN ++ ++QNGF + LEL L M G + IT VL ++A+
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L V K +HG ++ GF V + ++L D Y KC + AR +FD + K VSWN ++
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ G ++A+ +F KML E I P T AL AC+ L G +H + +++
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ SL MY KC R++ A + + + R +SW +++ GYA +GR+ EA F+EM
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM- 441
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+SL K D T+ ++ A LS + K
Sbjct: 442 ---------------KSLGMKP---------------DSFTMVSVIPALAELSVTRHAKW 471
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG I R+ NIFV+ AL+DMY KCG + AR F +S R ++WNA++ GY G
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRH-VITWNAMIDGYGTHG 530
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVC 514
A+ F +M + P+ T+ ++++AC++ +++G + H ++ Y E ++
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDH 589
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
GA+V++ + ++ A + I +LG C + E E K +
Sbjct: 590 YGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEK-AAKKLFEL 648
Query: 575 KPDHITFHGILLACIHEGNVK 595
PD +H +LLA I+ K
Sbjct: 649 NPDEGGYH-VLLANIYASTSK 668
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/654 (28%), Positives = 331/654 (50%), Gaps = 40/654 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLN------RAIECYGKCGNLDDARGLF 100
L + C SK++ + + +L+ + T L N + ++ Y C L AR +F
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 101 DEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
D+MP R WN ++ AY NG ++L+ M G++ N+ T+ VL++ + E
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+++H I + NV + ++LVD Y KC + DA+ +FD + ++ V+WN ++
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + + V ++ D+ P + T L A + ++S G +IHG ++ F GD
Sbjct: 195 FSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGD 254
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGRIREARELFNEMP 337
VV + ++Y KC ++ AR + D +N ++W+++V Y + +REA ELF ++
Sbjct: 255 VVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL- 313
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+++ + VTL ++ VCA L+++ G
Sbjct: 314 ---------------------------LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTC 346
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + ++ + ++ V N LL MY KCG + A +F +M RD VS+ A+++GY + G
Sbjct: 347 LHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEM-DLRDAVSFTAIISGYVQNG 405
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
SEE + F EMQ P K T ++L ACA+++ L G HC+ I + + +
Sbjct: 406 NSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICN 465
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+++Y KC ++ A +VF ++ N+MI+ + + G EAL +F M+ EG+KP
Sbjct: 466 ALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKP 525
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +TF ++ AC H G V +F++M +GIIP++EHY CM+ L R G KE+ F
Sbjct: 526 DDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSF 585
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ +MP P V + + CR LGE ++++ +L P + F + +N +
Sbjct: 586 IEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMY 639
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 232/459 (50%), Gaps = 39/459 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + C++ K E R++ ++ V++ ++ Y KCG LDDA+ +FD+M
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH 181
Query: 105 ERDGGSWNAMLGAYT-QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+RD +WN+M+ ++ G L + M + VS N T VL + A+ L K
Sbjct: 182 KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGK 240
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVA 222
++HG V+RGF G+V++ + ++D YGKC + ARR+FD + KN V+W+ +V Y+V
Sbjct: 241 EIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVC 300
Query: 223 GNGKEAVVMFFK--MLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+EA+ +F + ML++D+ L+ T A + C+ L+ G +H IK F D
Sbjct: 301 DFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDL 360
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+V +L MY KCG + A ++ D R+ +S+T+I+SGY +G E +F EM
Sbjct: 361 MVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLS 420
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ + ++ TL +L CA L+ + G H
Sbjct: 421 GI-------------------------------NPEKATLASVLPACAHLAGLHYGSCSH 449
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ ++++ + NAL+DMY KCG + +AR F +M +R VSWN ++ Y G
Sbjct: 450 CYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM-HKRGIVSWNTMIIAYGIHGIG 508
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
EA+ F MQ E +P TF L++AC++ + +GK
Sbjct: 509 LEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 307/599 (51%), Gaps = 21/599 (3%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ G P L+ M G + + T+ V ++ A L + LH +
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKE 227
+ GF NV + +++V YGKC + A MFDD+ ++ + VSWN +V Y+ A +
Sbjct: 287 RSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT 346
Query: 228 AVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A+ +F KM R + P + N L AC+ L++ G Q+HG I+ D V ++
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVV 406
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN----VI 342
+MY KCG++E+A + + ++++SW ++V+GY+ +GR+ A LF M E N V+
Sbjct: 407 DMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVV 466
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+W A++ GY + EALD M + VTL +L+ C + + GKE H +
Sbjct: 467 TWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYA 526
Query: 403 HR--------NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGY 453
+ + + ++ V N L+DMY KC + AR F +S + RD V+W ++ GY
Sbjct: 527 IKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGY 586
Query: 454 ARRGQSEEAMTSFS---EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY-E 509
A+ G + A+ FS +M +P+ FT L ACA +++L G+Q+H +V+RN Y
Sbjct: 587 AQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGS 646
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+ + L+++Y+K ++ A VF + + S++ G+ + RG +AL VF M
Sbjct: 647 VMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEM 706
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+K + PD ITF +L AC H G V + FF+ M +G+ P EHY CM+ L+ R G
Sbjct: 707 RKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGR 766
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ E +N MP PT + + CR + LGE+AA RL EL + + +N
Sbjct: 767 LGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSN 825
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 236/509 (46%), Gaps = 82/509 (16%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ + +F+ CA+ ++ L + + VF+ N + YGKCG L A
Sbjct: 257 PDHYT-FPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHN 315
Query: 99 LFDEMPER---DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV-SANQITYANVLRSSA 154
+FD++ R D SWN+++ AY L LF M + S + I+ N+L + A
Sbjct: 316 MFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACA 375
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+Q+HG ++ G +V + +++VD Y KC M +A ++F ++ K+ VSWN
Sbjct: 376 SLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNA 435
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDI---------------------------------- 240
+V Y AG + A+ +F +M E+I
Sbjct: 436 MVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCG 495
Query: 241 -RPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-------DFEGDDV-VLGSLTEMYVK 291
RP T + L AC + + G + H IK D DD+ V+ L +MY K
Sbjct: 496 SRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAK 555
Query: 292 CGRLEDARGLLD--QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
C E AR + D P +R++++WT ++ GYA G A +LF+ M
Sbjct: 556 CQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM------------- 602
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
F M K+ K D TL L CA L+ ++ G++VH ++ RN Y S
Sbjct: 603 ---------------FKMDKSIKPND-FTLSCALVACARLAALRFGRQVHAYVLRNFYGS 646
Query: 410 -NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+FV+N L+DMY K G++ +A+I F M Q R+ VSW +++TGY G+ E+A+ F E
Sbjct: 647 VMLFVANCLIDMYSKSGDVDTAQIVFDNMPQ-RNAVSWTSLMTGYGMHGRGEDALRVFDE 705
Query: 469 M-QWETRPSKFTFETLLAACANISSLEQG 496
M + P TF +L AC++ ++ G
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVDHG 734
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 202/483 (41%), Gaps = 101/483 (20%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K + HL S + +S ++ CAS A + R++ + VF+ N ++ Y
Sbjct: 353 KMTTRHLMSPDVISL---VNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMY 409
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KCG +++A +F M +D SWNAM+ Y+Q G L LF M + + +T+
Sbjct: 410 AKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWT 469
Query: 148 NVLRSSAEELE------------------------------LGVSKQLHGLIVKRGFC-- 175
V+ A+ + + V LHG K C
Sbjct: 470 AVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG---KETHCYA 526
Query: 176 --------------GNVILESSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRY 219
++ + + L+D Y KC AR+MFD + ++++ V+W V++ Y
Sbjct: 527 IKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGY 586
Query: 220 LVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G+ A+ +F M + D I+P +FT + AL AC+ L++ G Q+H +++ +F G
Sbjct: 587 AQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR-NFYG 645
Query: 278 DDV--VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ V L +MY K G ++ A+ + D +RN +SWTS+++GY + GR +A +F+E
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
MRK D +T ++L C+ G
Sbjct: 706 -------------------------------MRKVPLVPDGITFLVVLYACS-----HSG 729
Query: 396 KEVHGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
HG N S + V ++D++ + G L A +M V W A+
Sbjct: 730 MVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVAL 789
Query: 450 LTG 452
L+
Sbjct: 790 LSA 792
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 4 NAATILKNILSKSSPKPTPSKTLTKTISGHLK-SDEPVSYSLYAHLFQL----------- 51
+ + + + SPK T T I G+ + D + L++ +F++
Sbjct: 557 QSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTL 616
Query: 52 ------CASSKAIVEARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
CA A+ R++ + ++ FY + +F+ N I+ Y K G++D A+ +FD MP
Sbjct: 617 SCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP 676
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
+R+ SW +++ Y +G L +F +M + + IT+ VL
Sbjct: 677 QRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/620 (31%), Positives = 316/620 (50%), Gaps = 37/620 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL N I Y + G+ AR LFDEMP+R+G +W ++ YTQNG P + +M
Sbjct: 35 LFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIF 94
Query: 137 SGVSANQITYANVLRSSAEE-LELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVM 194
G N+ + + +R+ E L +Q+HG ++ G V + + L++ Y KC +
Sbjct: 95 EGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDI 154
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
AR +F + +K++VSWN ++ ++AV + M + + P NF +AL +C
Sbjct: 155 DHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSC 214
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L G Q HG IK+ + D V +L +Y + RL
Sbjct: 215 ASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLA------------------ 256
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKD 373
E +++F+ M ER+ +SWN ++ S EA++ M +
Sbjct: 257 -------------ECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWS 303
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++VT +L + LS K+ ++H I + + + + NALL Y K G + +
Sbjct: 304 PNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEI 363
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISS 492
F +MS+RRD+VSWN++++GY +AM + MQ R FTF T+L+ACA +++
Sbjct: 364 FSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVAT 423
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
LE G ++H IR C E +VV ALV++Y+KC ++YA R F ++ NSMI G
Sbjct: 424 LECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISG 483
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + G AL +F MK G PDHITF G+L AC H G V ++F SM YG++P
Sbjct: 484 YARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVP 543
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEWAAR 670
++EHY CM+ L R G + ++E+F+N+MP P + + R + CR NG T LG AA
Sbjct: 544 RVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAE 603
Query: 671 RLNELNPWAPFQFKITTNRF 690
L ++P + + +N +
Sbjct: 604 MLFNMDPQNAVNYVLLSNMY 623
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 210/740 (28%), Positives = 371/740 (50%), Gaps = 80/740 (10%)
Query: 28 KTISGHLKSDEPVSYSL---YAHLFQLCASSKAIVEARKLESNLVTFYPT-PPVFLLNRA 83
++++ + P +SL Y+ + +LC S KA+ E +++ ++++T VFL R
Sbjct: 61 QSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 120
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ YGKCG L DA LFD MP + +WNAM+GAY NG P +LEL+ +M SG+ +
Sbjct: 121 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 180
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+ +L++ + ++HGL +K G+ V + +S+V Y KC + AR++FD
Sbjct: 181 CTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDR 240
Query: 204 IQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+ K + VSWN ++ Y G EA+ +F +M + + P +TF AL AC S +
Sbjct: 241 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 300
Query: 263 GMQIHGVIIKIDF-------------------------------EGDDVVLGSLTEMYVK 291
GM IH ++K + + D + S+ +V+
Sbjct: 301 GMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ 360
Query: 292 CGRLEDA----RGLLDQPDERNIISWTSIVSGYAISGRIREAREL--------------- 332
G +A + D + ++++ SI++ A SG ++
Sbjct: 361 NGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQV 420
Query: 333 --------------------FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
F++MP+++V+SW ++AG+ ++ AL+ ++
Sbjct: 421 GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI 480
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D+D + + IL C+GL I KE+H +I R S ++ + N ++D+Y +CGN+ A
Sbjct: 481 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAAR 539
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANI 490
F ++ + +D VSW ++++ Y G + EA+ F M+ ET P + ++L+A A++
Sbjct: 540 MF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK-ETGVEPDSISLVSILSAAASL 597
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
S+L++GK+IH F+IR + + LV++Y +C LE + VF + D+++ SMI
Sbjct: 598 SALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMI 657
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
+ + GR A+++F M+ E I PDHI F +L AC H G + +F +SM+ +Y +
Sbjct: 658 NAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQL 717
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P EHY C++ L R +++E FV M PT + + C+ + LGE AA+
Sbjct: 718 EPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQ 777
Query: 671 RLNELNPWAPFQFKITTNRF 690
+L E++P P + + +N +
Sbjct: 778 KLLEMDPENPGNYVLVSNVY 797
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 27/364 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ K I +++ S ++ + L N ++ YG+CGN+D A +F+ + +D SW
Sbjct: 494 CSGLKLISSVKEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 552
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
+M+ Y NG LELF M +GV + I+ ++L ++A L K++HG +++
Sbjct: 553 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 612
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+GF L S+LVD Y +C + +R +F+ I+NK+ V W ++ Y + G G+ A+ +
Sbjct: 613 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 672
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYV 290
F +M E I P + F L+ACS EG + + + + E L ++
Sbjct: 673 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLG 732
Query: 291 KCGRLEDA----RGLLDQPDERNIISWTSIVSGYAIS-----GRIREARELFNEMPERNV 341
+ LE+A +G+ +P W +++ I G I + L EM N
Sbjct: 733 RANHLEEAYQFVKGMEVEPTAE---VWCALLGACQIHSNKELGEIAAQKLL--EMDPENP 787
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++ + Y+ WK+ M+ + GL N G S I++G +VH F
Sbjct: 788 GNYVLVSNVYSAERRWKDVEXVRMRMKAS---------GLKKN--PGCSWIEVGNKVHTF 836
Query: 402 IHRN 405
+ R+
Sbjct: 837 MARD 840
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFT----FETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+RG EA S +++ PS+F+ + ++L C + +L +G+Q+H +I +
Sbjct: 52 KRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALF 111
Query: 511 N-VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
N V LV +Y KC CL A ++F + N+MI + N +LE++ M
Sbjct: 112 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 171
Query: 570 KKEGIKPDHITFHGILLAC 588
+ GI D TF IL AC
Sbjct: 172 RVSGIPLDACTFPCILKAC 190
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 345/690 (50%), Gaps = 55/690 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L Q C KA + + + ++++ + FL NR IE Y KC +D +R LFD+MP+
Sbjct: 9 ASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPK 68
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--EELELGVSK 163
RD +WNA+LGAY + LF +M + + + + R+ A +++ +
Sbjct: 69 RDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGR 128
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+ HG+ +K G N+ + ++L+ Y KC + DA + F D+ N VS+ ++ +
Sbjct: 129 RCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSD 188
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACS--------------FLSSPYEGMQIHGV 269
EA +F MLR I + + ++ L CS LSS G Q+H +
Sbjct: 189 QVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCL 248
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI------- 322
IK FE D + SL +MY K G ++ A + E +++SW +++GY
Sbjct: 249 TIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKA 308
Query: 323 ----------------------------SGRIREARELFNEMPERNVISWNAMLAGYTRS 354
SG I R++F+ M ++ SWN +L+GY+++
Sbjct: 309 IEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQN 368
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
KEA+ M+ + D+ TL +IL+ AG+ ++ G++VH + + ++I+++
Sbjct: 369 ENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLA 428
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR 474
+ L+ MY KCG + A+ F ++++ D V WN+++ G + +EA T F +M+ +
Sbjct: 429 SGLIGMYSKCGKVEMAKRIFDRIAEL-DIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGM 487
Query: 475 -PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
PS+F++ T+L+ CA +SSL QG+Q+H + R Y + AL+++Y+KC ++ A
Sbjct: 488 FPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARW 547
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF + + N MI G+ N G EA+ ++ M G KPD ITF +L AC H G
Sbjct: 548 VFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGL 607
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V ++ F+SM+ ++G+ P ++HY C+I R G + E E +++MP + +
Sbjct: 608 VDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLL 667
Query: 654 DKCRKNGYATLGEWAARRLNELNPW--APF 681
CR +L AA L L+P AP+
Sbjct: 668 SSCRVYADVSLARRAAEELFHLDPQNSAPY 697
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 23/282 (8%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L +L C GK +H + R+ S + F+SN L++ Y KC + ++R F QM
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWETRPSKFTFETLLAACANISS 492
+RD +WNA+L Y + + E+A F+EM W T S T AC +
Sbjct: 68 -KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRN---GACGALVD 123
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+E G++ H I+ + N+ AL+ +Y KC C+ AI+ F + + + +M+ G
Sbjct: 124 VECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGG 183
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC---------IHEGNVKLAL----Q 599
+++ EA +F LM + I D ++ +L C +H+ N L+ Q
Sbjct: 184 LADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQ 243
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ K+G L ++ +Y + G M E MP
Sbjct: 244 QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP 285
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 8/210 (3%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +S YA + CA ++ + R++ S + F+ + I+ Y KCG++D AR
Sbjct: 489 PSQFS-YATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARW 547
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE-- 156
+FD M ++ +WN M+ Y QNG + L+ DM SG + IT+ VL + +
Sbjct: 548 VFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGL 607
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVI 215
++ G+ K + + + G V + ++D+ G+ + +A + D + K + + W V+
Sbjct: 608 VDTGI-KIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVL 666
Query: 216 V---RRYLVAGNGKEAVVMFFKMLREDIRP 242
+ R Y + A F + ++ P
Sbjct: 667 LSSCRVYADVSLARRAAEELFHLDPQNSAP 696
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/597 (30%), Positives = 304/597 (50%), Gaps = 33/597 (5%)
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
+ + + K G++++A +F+ + ++ ++ ML Y +N L M + V
Sbjct: 86 KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKP 145
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +L+ + +L K++HG ++ F NV + +V+ Y KC + DA +MF
Sbjct: 146 VVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMF 205
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + ++ VSWN I+ + G K+A+ + +M E RP + T L A + +
Sbjct: 206 DRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLM 265
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G IHG I+ F + +L +MY KCG +E AR + D D++ ++SW S++ GY
Sbjct: 266 VGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYV 325
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G +A +F +M E + D VT+
Sbjct: 326 QNGEPEKAIAVFEKMLEEGI-------------------------------DPTGVTIME 354
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
L+ CA L +++ GK VH F+ + + S+I V N+L+ MY KC + A F ++ R
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT 414
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIH 500
VSWNA++ GYA+ G+ EA+ FSEM+ +P FT +++ A A +S K IH
Sbjct: 415 -HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+IR+C + N+ ALV++Y+KC + A ++F S VI N+MI G+ + GR
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL++F MKK ++P+ IT+ ++ AC H G V L+ F SM+ YG+ P ++HY M
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G +KE DF+ MP +P + + C+ + +GE AA++L ELNP
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNP 650
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 236/460 (51%), Gaps = 34/460 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+PV Y+ + +L ++C + + +++ L+T VF + + Y KC +DDA
Sbjct: 144 KPVVYN-FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FD MPERD SWN ++ ++QNGF + LEL L M G + IT VL ++A+
Sbjct: 203 KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVG 262
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L V K +HG ++ GF V + ++L D Y KC + AR +FD + K VSWN ++
Sbjct: 263 LLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMD 322
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ G ++A+ +F KML E I P T AL AC+ L G +H + +++
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGS 382
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ SL MY KC R++ A + + + R +SW +++ GYA +GR+ EA F+EM
Sbjct: 383 DISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM- 441
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+SL K D T+ ++ A LS + K
Sbjct: 442 ---------------KSLGMKP---------------DSFTMVSVIPALAELSVTRHAKW 471
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG I R+ NIFV+ AL+DMY KCG + AR F +S R ++WNA++ GY G
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRH-VITWNAMIDGYGTHG 530
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
A+ F +M + P+ T+ ++++AC++ +++G
Sbjct: 531 LGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEG 570
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 314/604 (51%), Gaps = 35/604 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + + Y KC +D A+ +F+ + ER+ WNAMLG + QNG +E F M
Sbjct: 344 VYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKR 403
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G ++ T+ ++ + A L QLH +++K F N+ + ++LVD Y K + +
Sbjct: 404 HGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKE 463
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR+ F+ ++ + VSWN I+ Y+ EA MF +M+ + P + A+ + AC+
Sbjct: 464 ARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G Q H +++K+ + SL +MYVKCG
Sbjct: 524 VQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGV---------------------- 561
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ AR++F MP RNV+S NA++AGYT L +EA+ ++ +
Sbjct: 562 ---------VLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKPTE 611
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT +L+ C G + +G+++HG + + + SS+ V +LL +Y + F
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFS 671
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
++ + V W A+++GYA++ E+A+ + M+ + P + F ++L ACA +SSL+
Sbjct: 672 ELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQ 731
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD-VIICNSMILGF 553
G++IH + + ++ V +L+++Y KC ++ +++VF+E + VI NSMI+G
Sbjct: 732 NGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGL 791
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N EALE+F M+++ I PD +TF G+L AC H G V + FD M Y ++P+
Sbjct: 792 AKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPR 851
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++H CM+ + R+G++ E E+F+N++ + + CRK+G G+ AA +L
Sbjct: 852 VDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLM 911
Query: 674 ELNP 677
EL P
Sbjct: 912 ELKP 915
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 252/519 (48%), Gaps = 38/519 (7%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +K +H +K G +L + +VD Y KC + A++ F ++ K+ +WN ++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
YL G V F M ++RP FTFA L ACS L G Q+H + K F
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS--------------- 323
G L +MY KC L DAR + D + +SWT++++GY
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236
Query: 324 --------------------GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
GR+ +AR+LF ++P NV++WN M++G+ + +EA+ F
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
++KT + +LG +L+ A LS + G VH + N++V +AL++MY K
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
C + +A+ F + + R+ V WNA+L G+A+ G ++E M FS M+ +P +FTF +
Sbjct: 357 CSKMDAAKQVFNSLGE-RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+ +ACA++ L G Q+H +I+N + N+ ALV++Y K L+ A + F+ D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+ N++I+G+ E EA +F M G+ PD ++ I+ AC + +K Q
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQ-CH 534
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ K G+ +I +Y + G + D MP
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/617 (27%), Positives = 275/617 (44%), Gaps = 57/617 (9%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
+EA K+ + P L + Y G L DAR LF ++P + +WN M+ +
Sbjct: 225 MEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ GF + FL++ +G+ A + + +VL + A L +H K G NV
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ S+LV+ Y KC M A+++F+ + +N V WN ++ + G +E + F M R
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+P FTF + AC+ L G Q+H V+IK F + V +L +MY K G L++A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R + + +SW +I+ GY EA +F M V+
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLP--------------- 509
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
D+V+L I++ CA + E+K G++ H + + ++ ++L+
Sbjct: 510 ----------------DEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLI 553
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
DMY KCG + +AR FY M R+ VS NA++ GY G EEA+ F E+Q +P++
Sbjct: 554 DMYVKCGVVLAARDVFYSMPS-RNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTE 611
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYAIRVF 535
TF LL C L G+QIH V++ + +VC L CL + F
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLL--------CLYMNSQRF 663
Query: 536 KESSSL--------DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+S +L +++ ++I G+ +AL+ + M+ + I PD F +L A
Sbjct: 664 VDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRA 723
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRMPFNPT 645
C +++ Q S+ G ++ C +I +Y + G +K MP
Sbjct: 724 CAGMSSLQNG-QEIHSLIFHTGF--NMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNN 780
Query: 646 VPMLRKIFDKCRKNGYA 662
V + KNGYA
Sbjct: 781 VISWNSMIVGLAKNGYA 797
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 156/361 (43%), Gaps = 24/361 (6%)
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
IV Y G + A++ F+ + +++V +WN++L+ Y L+ + M +
Sbjct: 82 IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPN 141
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T ++L+ C+GL ++ G++VH + + + F L+DMY KC LR AR+ F
Sbjct: 142 EFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVF- 200
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLE 494
+ D VSW A++ GY R G EA+ F MQ P + T T++ A + L
Sbjct: 201 DGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLA 260
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+++ + NVV ++ + K E AI F E + S LG
Sbjct: 261 DARKLFTQIPNP----NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSS-LGSV 315
Query: 555 HNERGREALEVFGLM-----KKEGIKPDHITFHGILLACIHEGNVKL--ALQFFDSMRCK 607
+ ++ +G M KEG+ D + G L ++ K+ A Q F+S+ +
Sbjct: 316 LSAIASLSMLNYGSMVHAQATKEGL--DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER 373
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP---MLRKIFDKCRKNGYATL 664
++ + M+ + + G +E+ +F + M + P IF C Y
Sbjct: 374 NIVL-----WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 665 G 665
G
Sbjct: 429 G 429
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 33 HLKSDEPV-SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
H++SD + + +A + + CA ++ +++ S + + I+ Y KCG
Sbjct: 704 HMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCG 763
Query: 92 NLDDARGLFDEMPERDGG-SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
++ + +F EMP R+ SWN+M+ +NG+ LE+F M + +++T+ VL
Sbjct: 764 DVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVL 823
Query: 151 RSSAEELELGVSKQLHGLIV 170
+ + + +++ L+V
Sbjct: 824 SACSHAGRVSEGRKVFDLMV 843
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/720 (28%), Positives = 353/720 (49%), Gaps = 78/720 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN-RAIECYGKCGNLDDARGLFDEMPER 106
L Q C K I R+L + F+LN R I Y CG+ D+R +FD++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WNA++ AYT+N + +F ++ + + + T V+++ A L+LG+ + +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG+ K +V + ++L+ YGKC ++ +A ++F+ + +N VSWN I+ + G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 226 KEAVVMFFKML--REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+E+ F +ML E P T L C+ +GM +HG+ +K+ + +V
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI------------REARE 331
SL +MY KC L +A+ L D+ D++NI+SW S++ GYA + +A+
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 332 LFNEMPERNVI------------------SW-----------NAMLAGYTR--------- 353
+E NV+ SW NA +A YTR
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 354 --------------SLLW--------KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+LL ++ALD M + D D T+G +L C+ +
Sbjct: 364 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 423
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+E+HGF RN + + F+ +LL +Y CG +A++ F M + R VSWN ++
Sbjct: 424 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIA 482
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
GY++ G +EA+ F +M + +P + + AC+ +S+L GK++HCF ++
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTE 542
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ +++++Y K C+ + R+F DV N +I G+ + RG+EALE+F M
Sbjct: 543 DIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKML 602
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ G+KPD TF GIL+AC H G V+ L++F+ M + I P+LEHY C++ + R G +
Sbjct: 603 RLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRI 662
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + MP +P + + CR +G LGE A +L EL P P + + +N F
Sbjct: 663 DDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLF 722
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 28/324 (8%)
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG A+ LFD M R SWN M+ Y+QNG P + LF M G+ +I V
Sbjct: 456 CGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCV 515
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ ++ L + K+LH +K ++ + SS++D Y K + ++R+FD ++ K+
Sbjct: 516 CGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV 575
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SWNVI+ Y + G GKEA+ +F KMLR ++P +FTF L ACS +G++
Sbjct: 576 ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 635
Query: 270 IIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ----PDERNIISWTSIVSGYAISG 324
++ + + E + +M + GR++DA L+++ PD R W+S++S I G
Sbjct: 636 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSR---IWSSLLSSCRIHG 692
Query: 325 RIREARELFNEM----PER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+ ++ N++ PE+ N + + + AG + W D V +R KDI
Sbjct: 693 NLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK---W----DDVRRVRGRMKDIG--- 742
Query: 379 LGLILNVCAGLSEIKMGKEVHGFI 402
L AG S I++G +VH F+
Sbjct: 743 ----LQKDAGCSWIEVGGKVHNFL 762
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 142/290 (48%), Gaps = 13/290 (4%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA-LLDMYRKCGNLRSARIWFYQM 437
+G++L C +I++G+ +H + + N FV N ++ MY CG+ +R+ F ++
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQ 495
+R++ WNA+++ Y R E+AM+ FSE+ E +P FT ++ ACA + L
Sbjct: 61 -RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL 119
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+ IH + +V AL+ +Y KC +E A++VF+ +++ NS+I GF
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179
Query: 556 NERGREALEVFG--LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N +E+ F L+ +E PD T +L C E +++ + + K G+ +
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVH-GLAVKLGLNEE 238
Query: 614 LEHYECMIKLYCRYGYMKELE------DFVNRMPFNPTVPMLRKIFDKCR 657
L +I +Y + ++ E + D N + +N + + D CR
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR 288
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ A+ ++L + + T +F+ + I+ Y K G + ++ +FD + E+D SW
Sbjct: 519 CSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASW 578
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSK-----Q 164
N ++ Y +G LELF M G+ + T+ +L S A +E G+
Sbjct: 579 NVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLN 638
Query: 165 LHGLIVKRGFCGNVILE--SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLV 221
LH + K LE + +VD G+ + DA R+ +++ + ++ W+ ++ +
Sbjct: 639 LHNIEPK--------LEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRI 690
Query: 222 AGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACS 255
GN + K+L E +P N+ + LFA S
Sbjct: 691 HGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 725
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 312/608 (51%), Gaps = 33/608 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y C LD A +F EMPER+ W+A++ Y +N L+L+ M G+ +Q
Sbjct: 212 VDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQ 271
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+A+ RS A + QLH +K F + I+ ++ +D Y KC M DAR++F+
Sbjct: 272 ATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNT 331
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
N S N ++ Y EA+ +F + + + + + AL ACS + EG
Sbjct: 332 FPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG 391
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+HG+ +K + + V ++ +MY KCG L
Sbjct: 392 IQLHGLAVKCGLDFNICVANTILDMYAKCGAL---------------------------- 423
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F++M ++ +SWNA++A + ++ +E L M ++T + D T G ++
Sbjct: 424 ---MEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVV 480
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAG + G EVHG + ++ + FV +A++DMY KCG L A ++ + R
Sbjct: 481 KACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK-IHERLEERTT 539
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWN++++G++ Q E A++ FS M Q P FT+ T+L CAN++++E GKQIH
Sbjct: 540 VSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQ 599
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ +V +V++Y+KC ++ + +F+++ D + ++MI + ++ G +A
Sbjct: 600 ILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDA 659
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+++F M+ + +KP+H F +L AC H G V L +F MR YG+ PQ+EHY CM+
Sbjct: 660 IKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVD 719
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
L R G + E + + MPF + R + CR G + E AA L +L+P
Sbjct: 720 LLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSA 779
Query: 683 FKITTNRF 690
+ + +N +
Sbjct: 780 YVLLSNVY 787
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 187/692 (27%), Positives = 320/692 (46%), Gaps = 72/692 (10%)
Query: 17 SPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPP 76
+ + TP + S + + +++S H+FQ C++ KAI ++ + + P
Sbjct: 16 NSQTTPPYAIHSISSNQMNPTKKLTFS---HIFQKCSNLKAINPGKQAHAQITVTGFVPT 72
Query: 77 VFLLNRAIECYGKC-------------------------------GNLDDARGLFDEMPE 105
VF+ N ++ Y KC GN++ A+ LFD MPE
Sbjct: 73 VFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE 132
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
RD SWN+ML Y QNGF +++E+F M + + T+A VL++ + G+ Q+
Sbjct: 133 RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV 192
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L ++ GF +V+ ++LVD Y C + A +F ++ +N+V W+ ++ Y+
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
E + ++ ML E + TFA+A +C+ LS+ G Q+H +K +F D++V +
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTAT 312
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KC R+ D AR++FN P S N
Sbjct: 313 LDMYAKCDRMVD-------------------------------ARKVFNTFPNPTRQSHN 341
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
A++ GY R EAL+ ++K+ D D+++L L C+ + G ++HG +
Sbjct: 342 ALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKC 401
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
NI V+N +LDMY KCG L A + F M + +D VSWNA++ + + EE +
Sbjct: 402 GLDFNICVANTILDMYAKCGALMEACLIFDDM-EIKDAVSWNAIIAAHEQNEHVEETLAL 460
Query: 466 FSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F M T P +TF +++ ACA +L G ++H VI++ ++ A++++Y K
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK 520
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L A ++ + + NS+I GF ++G AL F M + G+ PD+ T+ +
Sbjct: 521 CGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATV 580
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L C + V+L Q + K + + ++ +Y + G M++ + P
Sbjct: 581 LDICANLATVELGKQIHGQI-LKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRD 639
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
V I C Y LGE A + E+
Sbjct: 640 YVTWSAMI---C-AYAYHGLGEDAIKLFEEMQ 667
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 164/290 (56%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C++ K +E +L V + + N ++ Y KCG L +A +FD+M +D SW
Sbjct: 382 CSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSW 441
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA++ A+ QN TL LF+ M S + + T+ +V+++ A + L ++HG ++K
Sbjct: 442 NAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + S+++D Y KC ++ +A ++ + ++ + VSWN I+ + G+ A+
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +ML+ + P NFT+A L C+ L++ G QIHG I+K+ D + ++ +MY K
Sbjct: 562 FSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSK 621
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
CG ++D+R + ++ +R+ ++W++++ YA G +A +LF EM +NV
Sbjct: 622 CGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNV 671
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 182/402 (45%), Gaps = 29/402 (7%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
I++ +TL +S + EP Y+ + + + CA KA+ ++ ++
Sbjct: 444 IIAAHEQNEHVEETLALFVSMLRSTMEPDDYT-FGSVVKACAGKKALNYGMEVHGRVIKS 502
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
F+ + I+ Y KCG L +A + + + ER SWN+++ ++ L F
Sbjct: 503 GMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYF 562
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M GV + TYA VL A + + KQ+HG I+K +V + S++VD Y KC
Sbjct: 563 SRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKC 622
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
M D+R MF+ ++ V+W+ ++ Y G G++A+ +F +M ++++P + F + L
Sbjct: 623 GNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVL 682
Query: 252 FACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
AC+ + +G+ +G+ +++ + ++ + G++ +A L++
Sbjct: 683 RACAHMGFVDKGLHYFREMRSHYGLDPQMEH------YSCMVDLLGRSGQVNEALELIES 736
Query: 305 -PDERNIISWTSIVSGYAISGRIREARELFN---EMPERNVISWNAMLAGYTRSLLWKEA 360
P E + + W +++ + G + A + N ++ ++ ++ + Y + +W E
Sbjct: 737 MPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEV 796
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
M+ L G S I++ EVH F+
Sbjct: 797 AKIRSFMKNYK-----------LKKEPGCSWIQVRDEVHAFL 827
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 210/740 (28%), Positives = 371/740 (50%), Gaps = 80/740 (10%)
Query: 28 KTISGHLKSDEPVSYSL---YAHLFQLCASSKAIVEARKLESNLVTFYPT-PPVFLLNRA 83
++++ + P +SL Y+ + +LC S KA+ E +++ ++++T VFL R
Sbjct: 97 QSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 156
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ YGKCG L DA LFD MP + +WNAM+GAY NG P +LEL+ +M SG+ +
Sbjct: 157 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 216
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+ +L++ + ++HGL +K G+ V + +S+V Y KC + AR++FD
Sbjct: 217 CTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDR 276
Query: 204 IQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+ K + VSWN ++ Y G EA+ +F +M + + P +TF AL AC S +
Sbjct: 277 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 336
Query: 263 GMQIHGVIIKIDF-------------------------------EGDDVVLGSLTEMYVK 291
GM IH ++K + + D + S+ +V+
Sbjct: 337 GMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ 396
Query: 292 CGRLEDA----RGLLDQPDERNIISWTSIVSGYAISGRIREAREL--------------- 332
G +A + D + ++++ SI++ A SG ++
Sbjct: 397 NGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQV 456
Query: 333 --------------------FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
F++MP+++V+SW ++AG+ ++ AL+ ++
Sbjct: 457 GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI 516
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D+D + + IL C+GL I KE+H +I R S ++ + N ++D+Y +CGN+ A
Sbjct: 517 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAAR 575
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANI 490
F ++ + +D VSW ++++ Y G + EA+ F M+ ET P + ++L+A A++
Sbjct: 576 MF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK-ETGVEPDSISLVSILSAAASL 633
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
S+L++GK+IH F+IR + + LV++Y +C LE + VF + D+++ SMI
Sbjct: 634 SALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMI 693
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
+ + GR A+++F M+ E I PDHI F +L AC H G + +F +SM+ +Y +
Sbjct: 694 NAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQL 753
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P EHY C++ L R +++E FV M PT + + C+ + LGE AA+
Sbjct: 754 EPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQ 813
Query: 671 RLNELNPWAPFQFKITTNRF 690
+L E++P P + + +N +
Sbjct: 814 KLLEMDPENPGNYVLVSNVY 833
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 171/364 (46%), Gaps = 27/364 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ K I +++ S ++ + L N ++ YG+CGN+D A +F+ + +D SW
Sbjct: 530 CSGLKLISSVKEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSW 588
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
+M+ Y NG LELF M +GV + I+ ++L ++A L K++HG +++
Sbjct: 589 TSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIR 648
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+GF L S+LVD Y +C + +R +F+ I+NK+ V W ++ Y + G G+ A+ +
Sbjct: 649 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 708
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYV 290
F +M E I P + F L+ACS EG + + + + E L ++
Sbjct: 709 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLG 768
Query: 291 KCGRLEDA----RGLLDQPDERNIISWTSIVSGYAIS-----GRIREARELFNEMPERNV 341
+ LE+A +G+ +P W +++ I G I + L EM N
Sbjct: 769 RANHLEEAYQFVKGMEVEPTAE---VWCALLGACQIHSNKELGEIAAQKLL--EMDPENP 823
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++ + Y WK+ + M+ + GL N G S I++G +VH F
Sbjct: 824 GNYVLVSNVYAAERRWKDVEEVRMRMKAS---------GLKKN--PGCSWIEVGNKVHTF 872
Query: 402 IHRN 405
+ R+
Sbjct: 873 MARD 876
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFT----FETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+RG EA S +++ PS+F+ + ++L C + +L +G+Q+H +I +
Sbjct: 88 KRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALF 147
Query: 511 N-VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
N V LV +Y KC CL A ++F + N+MI + N +LE++ M
Sbjct: 148 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 207
Query: 570 KKEGIKPDHITFHGILLAC 588
+ GI D TF IL AC
Sbjct: 208 RVSGIPLDACTFPCILKAC 226
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/654 (29%), Positives = 326/654 (49%), Gaps = 20/654 (3%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG--SWNA 113
K I + + + L++F + L + I Y G L A L P D G WN+
Sbjct: 39 KTISQVKLIHQKLLSF-GILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ +Y NG + L F M+ + + T+ V ++ E + H L G
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F NV + ++LV Y +C ++DAR++FD++ + VSWN I+ Y G K A+ MF
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 234 KMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
KM E RP + T N L C+ + + G Q HG + + + V L +MY K
Sbjct: 218 KMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKF 277
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAML 348
G +++A + ++++SW ++V+GY+ GR +A LF +M E +V++W+A +
Sbjct: 278 GMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAI 337
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF------- 401
+GY + L EAL M + ++VTL +L+ CA + + GKE+H +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD 397
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYARRGQSE 460
+ +N + V N L+DMY KC + AR F +S + RD V+W ++ GY++ G +
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 461 EAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVCRG 516
+A+ SEM +TRP+ FT L ACA++++L GKQIH + +RN + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSN 517
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+++Y KC + A VF + + S++ G+ + G EAL +F M++ G K
Sbjct: 518 CLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKL 577
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +T +L AC H G + +++F+ M+ +G+ P EHY C++ L R G +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + + CR +G LGE+AA+++ EL + + +N +
Sbjct: 638 IEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMY 691
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 192/462 (41%), Gaps = 89/462 (19%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS ++ VT +F+ N ++ Y K G +D+A +F MP +D SW
Sbjct: 239 CASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSW 298
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNH----------------------------------- 136
NAM+ Y+Q G + LF M
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIV-------KRGFCGNVILESSLVDAYG 189
SG+ N++T +VL A L K++H + K G ++ + L+D Y
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYA 418
Query: 190 KCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNF 245
KC + AR MFD + + ++ V+W V++ Y G+ +A+ + +M ED RP F
Sbjct: 419 KCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
T + AL AC+ L++ G QIH ++ + + + L +MY KCG + DAR + D
Sbjct: 479 TISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDN 538
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
E+N ++WTS+++GY + G EA +F E
Sbjct: 539 MMEKNEVTWTSLMTGYGMHGYGEEALGIFEE----------------------------- 569
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------LL 418
MR+ +D VTL ++L C+ I G E + N ++ VS L+
Sbjct: 570 --MRRIGFKLDGVTLLVVLYACSHSGMIDQGME-----YFNRMKTDFGVSPGPEHYACLV 622
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
D+ + G L +A +M V W A+L+ G+ E
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE 664
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/626 (30%), Positives = 319/626 (50%), Gaps = 33/626 (5%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L A + CA S+A+ +++ V V++ I Y K G +D A +FD +
Sbjct: 116 LLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDAL 175
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P ++ +W A++ Y+Q G G LELF M GV ++ A+ + + + L +
Sbjct: 176 PVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGR 235
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q HG + + + ++L+D Y KC ++ AR++FD ++N+N VSW ++ Y+
Sbjct: 236 QTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNS 295
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+ MF+++ +E +P F A+ L +C L++ ++G Q+H IK + E D+ V
Sbjct: 296 CDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKN 355
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY KC L EAR +F + E + IS
Sbjct: 356 SLIDMYAKCEHLT-------------------------------EARAVFEALAEDDAIS 384
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+NAM+ GY+R A+D MR + +T +L V + S I++ K++HG I
Sbjct: 385 YNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIV 444
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ S +++ ++L+D+Y K + A+ F M RD V WNA++ G A+ Q EEA+
Sbjct: 445 KSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLM-HNRDMVIWNAMIFGLAQNEQGEEAV 503
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F+++Q P++FTF L+ + + S+ G+Q H +I+ + + AL+++Y
Sbjct: 504 KLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMY 563
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC ++ +F+ + DVI NSMI + + + EAL VF +M G++P+++TF
Sbjct: 564 AKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFV 623
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V L+ FD M+ KY I P EHY ++ L+ R G + ++F+ RMP
Sbjct: 624 GVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPI 683
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWA 668
P + R + C G +G +A
Sbjct: 684 EPAAAVWRSLLSACHLFGNVEIGRYA 709
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 294/576 (51%), Gaps = 43/576 (7%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P +FL N + Y K G + DAR LFD MP ++ SW + + + Q+G + LF
Sbjct: 44 PDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAF 103
Query: 135 NHS--GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ G + N+ A+ LR+ A+ + +Q+HG+ V+ G GNV + ++L++ Y K
Sbjct: 104 QRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVG 163
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ A +FD + KN V+W ++ Y G G A+ +F KM + +RP F A+A+
Sbjct: 164 CIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVS 223
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS L G Q HG +I E D V+ +L ++Y KC RL AR L D + RN++S
Sbjct: 224 ACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVS 283
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
WT++++GY + EA +F ++ + W+
Sbjct: 284 WTTMIAGYMQNSCDAEAMAMFWQLSQEG----------------WQP------------- 314
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D ILN C L+ I G++VH + + S+ +V N+L+DMY KC +L AR
Sbjct: 315 --DVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARA 372
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANIS 491
F +++ D +S+NA++ GY+R G A+ FS+M++ +PS TF +LL ++ S
Sbjct: 373 VFEALAE-DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQS 431
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
++E KQIH ++++ +++ +L++VY+K +E A VF + D++I N+MI
Sbjct: 432 AIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIF 491
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL-ALQFFDSMRCKYGI 610
G NE+G EA+++F ++ G+ P+ TF + L + V + Q F + K G
Sbjct: 492 GLAQNEQGEEAVKLFNQLQVSGLAPNEFTF--VALVTVASTLVSMFHGQQFHAQIIKAGA 549
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+I +Y + G++KE R+ F T+
Sbjct: 550 DSDHHVSNALIDMYAKCGFIKE-----GRLLFESTL 580
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 248/523 (47%), Gaps = 42/523 (8%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H V G ++ L + L+ AY K + DARR+FD + +KN VSW + + G
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 226 KEAVVMF--FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
++AV +F F+ P F A+AL AC+ + G Q+HGV ++I +G+ V
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +Y K G ++ A + D +N ++WT++++GY+ G+ A ELF +M
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKM------- 206
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
LD V D+ L ++ C+ L ++ G++ HG+ +
Sbjct: 207 ----------------GLDGV--------RPDRFVLASAVSACSALGFLEGGRQTHGYAY 242
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R ++ V NAL+D+Y KC L AR F M + R+ VSW ++ GY + EAM
Sbjct: 243 RIAVETDASVINALIDLYCKCSRLSLARKLFDCM-ENRNLVSWTTMIAGYMQNSCDAEAM 301
Query: 464 TSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F ++ E +P F ++L +C +++++ QG+Q+H I+ E + + +L+++Y
Sbjct: 302 AMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMY 361
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L A VF+ + D I N+MI G+ A++VF M+ +KP +TF
Sbjct: 362 AKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFV 421
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L + ++L+ Q + K G L +I +Y ++ +++ + N M
Sbjct: 422 SLLGVSSSQSAIELSKQ-IHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHN 480
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL--NPWAPFQF 683
V IF + GE A + N+L + AP +F
Sbjct: 481 RDMVIWNAMIFGLAQNEQ----GEEAVKLFNQLQVSGLAPNEF 519
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 223/475 (46%), Gaps = 34/475 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C S AI + R++ ++ + ++ N I+ Y KC +L +AR +F+ + E
Sbjct: 320 ASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAE 379
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
D S+NAM+ Y++ G +++F M + + + +T+ ++L S+ + + +SKQ+
Sbjct: 380 DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQI 439
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HGLIVK G ++ SSL+D Y K ++ DA+ +F+ + N++ V WN ++ G
Sbjct: 440 HGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQG 499
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EAV +F ++ + P FTF + S L S + G Q H IIK + D V +L
Sbjct: 500 EEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNAL 559
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNV 341
+MY KCG +++ R L + +++I W S++S YA G+ EA +F M E N
Sbjct: 560 IDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY 619
Query: 342 ISWNAMLAGYTRSLLWKEAL-DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+++ +L+ + L E L F F+ K + ++N+ ++ KE
Sbjct: 620 VTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKE--- 676
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV-SWNAVLTG--YARRG 457
FI R V +LL GN+ R + +M+ D S +VL YA RG
Sbjct: 677 FIERMPIEPAAAVWRSLLSACHLFGNVEIGR-YATEMALLADPADSGPSVLMSNIYASRG 735
Query: 458 QSEEAMTSFSEMQWETRPSKFTFETLLAACANI------SSLEQGKQIHCFVIRN 506
+A M CA + S +E K++H F+ R
Sbjct: 736 LWSDAQKLRQGMD----------------CAGVVKEPGYSWIEVMKEVHTFIARG 774
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 326/603 (54%), Gaps = 35/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + I+ Y G ++DAR FD+M ++D WN M+ Y Q G ++LF DM
Sbjct: 45 MFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMS 104
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S + +T+A VL S E + +QLHGL+V+ G ++ ++LV Y K + D
Sbjct: 105 SEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGD 164
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++FD + + V WN ++ Y+ G +A ++F +M+ I+P + TF + L + +
Sbjct: 165 ARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAE 224
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
SS + +IHG I++ D + +L ++Y KC R+ +
Sbjct: 225 SSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKC---------------RDAVM---- 265
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDID 375
A ++FN + +++ + AM++GY + + K+AL+ F +L++K +
Sbjct: 266 ------------ACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIP-N 312
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T IL CAGL+ IK+G+E+HG+I +N+ V +A+++MY KCG L A + F
Sbjct: 313 ALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFG 372
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
++S +D + WN+++T +++ G+ EEA+ F +M E + T L+ACANI +L
Sbjct: 373 RIS-IKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALH 431
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+IH F+I+ +E ++ AL+ +Y KC L A VF + + NS+I +
Sbjct: 432 YGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYG 491
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
++ ++L +F M +EGI+PDHITF IL +C H G V+ +++F M +YGI Q+
Sbjct: 492 YHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQM 551
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CM L+ R G++ E + + MPF P + + CR +G L E A+R L +
Sbjct: 552 EHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLD 611
Query: 675 LNP 677
L P
Sbjct: 612 LEP 614
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 272/595 (45%), Gaps = 74/595 (12%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESN 67
+L N++ + S + K + S+ +A + + S + R+L
Sbjct: 77 VLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGL 136
Query: 68 LV----TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+V F P + N + Y K L DAR LFD MP+ D WN M+G Y QNGF
Sbjct: 137 VVRSGLDFVP----LVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGF 192
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
LF +M +G+ + IT+ + L S AE L K++HG IV+ G +V L S+
Sbjct: 193 MDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSA 252
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L+D Y KC A +MF+ + V + ++ Y++ G K+A+ +F +L++ + P
Sbjct: 253 LIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPN 312
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
TF++ L AC+ L++ G ++HG IIK + E V ++ MY KCGRL+ A +
Sbjct: 313 ALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFG 372
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ++ I W SI++ ++ G+ EA LF +M V
Sbjct: 373 RISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGV---------------------- 410
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D VT+ L+ CA + + GKE+HGF+ + + S++F +AL++MY K
Sbjct: 411 ---------KYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAK 461
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
CG L AR+ F M Q +++V+WN+++ Y G +++ F M E +P TF T
Sbjct: 462 CGKLNIARLVFNLM-QEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLT 520
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L++C + +E G + Y +C EY I + ++
Sbjct: 521 ILSSCGHAGQVEDGVR-----------------------YFRCMTEEYGI-----PAQME 552
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
C + + G R E F ++ P + +L AC GNV+LA
Sbjct: 553 HYACMADLFG-----RAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELA 602
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 229/453 (50%), Gaps = 35/453 (7%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV ++ T+ V++ + + K + +I++ GF ++ + SSL+ Y + DA
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL-FACSF 256
RR FD + +K+ V WNV++ Y+ G A+ +F M+ + +P + TFA L +CS
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
Y G Q+HG++++ + +V +L +Y K +L DAR L D + +++ W +
Sbjct: 125 AMVEY-GRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRM 183
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GY +G + +A LFNEM + D
Sbjct: 184 IGGYVQNGFMDDASMLFNEMISAGI-------------------------------KPDS 212
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T L A S +K KE+HG+I R+ ++++++AL+D+Y KC + A F
Sbjct: 213 ITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMF-N 271
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQ 495
+S + D V + A+++GY G +++A+ F +Q + P+ TF ++L ACA +++++
Sbjct: 272 LSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKL 331
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+++H ++I+N E A++ +Y KC L+ A +F S D I NS+I F
Sbjct: 332 GRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQ 391
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ + EA+ +F M EG+K D +T L AC
Sbjct: 392 DGKPEEAIYLFRQMGMEGVKYDCVTVSAALSAC 424
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 177/364 (48%), Gaps = 33/364 (9%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
ML + P +TF + C+ L++ G I +I+++ F+ D V SL ++Y G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+EDAR D+ +++ + W +++GY G A +LF +M
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDM------------------ 102
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
M K D VT +L++ + ++ G+++HG + R+ V
Sbjct: 103 ------------MSSEAKP-DSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVG 149
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWET 473
N L+ +Y K L AR F M Q D V WN ++ GY + G ++A F+EM
Sbjct: 150 NTLVTVYSKGRQLGDARKLFDMMPQ-IDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGI 208
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+P TF + L + A SSL+Q K+IH +++R+ ++V AL+++Y KC A +
Sbjct: 209 KPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACK 268
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F S+ D++I +MI G+ N ++ALE+F + ++ + P+ +TF IL AC
Sbjct: 269 MFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAA 328
Query: 594 VKLA 597
+KL
Sbjct: 329 IKLG 332
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P K+TF ++ C ++++ GK I ++ +++++ +L+++Y C+E A R
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + D ++ N MI G+ A+++F M KPD +TF +L E V
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 595 KLALQF 600
+ Q
Sbjct: 128 EYGRQL 133
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/620 (30%), Positives = 319/620 (51%), Gaps = 6/620 (0%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL N I Y K G + DA +F + + S+ A++ ++++ + +ELF M
Sbjct: 130 IFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLD 189
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG+ N+ T+ +L + ++ + Q+HG++VK G V + ++L+ Y KC +
Sbjct: 190 SGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDL 249
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACS 255
R+F+++ ++ SWN ++ + EA F M L + ++ +F+ + L AC+
Sbjct: 250 VLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACA 309
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
P +G Q+H + +K+ E V SL Y KCG D L + R++I+WT
Sbjct: 310 GSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTG 369
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ Y G + A E+FN+MP+RN IS+NA+LAG +R+ AL+ M + +I
Sbjct: 370 MITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEIS 429
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL I+ C L K+ +++ GF+ + SN + AL+DMY +CG + A FY
Sbjct: 430 DCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFY 489
Query: 436 QMSQRRDKVSW-NAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISS 492
Q S D + +++ GYAR G+ EA++ F Q E + ++L+ C +I
Sbjct: 490 QRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGF 549
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E GKQ+HC +++ A V +Y+KC ++ A+RVF + D++ N ++ G
Sbjct: 550 HEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAG 609
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH-EGN-VKLALQFFDSMRCKYGI 610
+ +G +AL ++ M+K GIKPD ITF I+ A H E N V F SM ++ I
Sbjct: 610 HVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNI 669
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P LEHY I + R+G ++E E + MP P V + R + + CR N L + AAR
Sbjct: 670 KPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAAR 729
Query: 671 RLNELNPWAPFQFKITTNRF 690
+ + P P + + +N +
Sbjct: 730 NILAVEPKDPLSYILKSNLY 749
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 228/536 (42%), Gaps = 73/536 (13%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++LR S + +++ +H +K ++ L ++L+ AY K ++ DA ++F +
Sbjct: 102 DLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCP 159
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N VS+ ++ + + EAV +FF ML I P +TF L AC G Q+H
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
G+++K+ + +L +Y KCG L+ L ++ ER+I SW +++S +
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
EA + F M + K K +D +L +L CA
Sbjct: 280 EAFDYFRGMQ-----------------------------LCKGLK-VDHFSLSTLLTACA 309
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN------------LRSARIW-- 433
G + G+++H + S++ VS++L+ Y KCG+ +R W
Sbjct: 310 GSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTG 369
Query: 434 ----------------FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+ +R+ +S+NAVL G +R A+ F EM E S
Sbjct: 370 MITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEIS 429
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T +++ AC + S + +QI FV++ N ALV++YT+C +E A ++F
Sbjct: 430 DCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFY 489
Query: 537 ESSSLD--VIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLACIHEGN 593
+ S + + SMI G+ N + EA+ +F + EG I D + IL C G
Sbjct: 490 QRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGF 549
Query: 594 VKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ Q M C K G+I + + +Y + M + N M V
Sbjct: 550 HEMGKQ----MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIV 601
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 179/388 (46%), Gaps = 36/388 (9%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E +I +++S Y G +R+A ++F+ + NV+S+ A+++G+++S EA++ F
Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + + ++ T IL C + ++G +VHG + + S +F+ NAL+ +Y KCG
Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGF 246
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLL 484
L F +M + RD SWN V++ + + +EA F MQ + F+ TLL
Sbjct: 247 LDLVLRLFEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLL 305
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC----------------- 527
ACA +G+Q+H ++ E ++ +L+ YTKC
Sbjct: 306 TACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVI 365
Query: 528 --------------LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L+ A+ VF + + I N+++ G N+ G ALE+F M +EG
Sbjct: 366 TWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEG 425
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
++ T I+ AC + K++ Q K+GI+ ++ +Y R G M++
Sbjct: 426 VEISDCTLTSIITACGLLKSFKVSQQ-IQGFVMKFGILSNSCIETALVDMYTRCGRMEDA 484
Query: 634 ED-FVNRMPFNPTVPMLRKIFDKCRKNG 660
E F R N ML + +NG
Sbjct: 485 EKIFYQRSLENDYTAMLTSMICGYARNG 512
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 207/457 (45%), Gaps = 22/457 (4%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+S VS SL + C S+ + ++L P V I Y + G L
Sbjct: 329 LESHLSVSSSLIG-FYTKCGSANDV-------TDLFETMPIRDVITWTGMITSYMEFGML 380
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D A +F++MP+R+ S+NA+L ++N R LELF++M GV + T +++ +
Sbjct: 381 DSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITAC 440
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF--DDIQNKNAVS 211
VS+Q+ G ++K G N +E++LVD Y +C M DA ++F ++N
Sbjct: 441 GLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAM 500
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA-CSFLSSPYEGMQIHGVI 270
++ Y G EA+ +F E ++ + ++ + C + G Q+H
Sbjct: 501 LTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHA 560
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K + V + MY KC ++DA + + + ++I+SW +V+G+ + + +A
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620
Query: 331 ELFNEMPERNV----ISWNAMLAGYTRSLL-WKEALDFVFLMRKTTKDIDQVTLGLILNV 385
++ +M + + I++ +++ Y + L ++ +F+ +T +I + TL +
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNI-KPTLEHYASF 679
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM--SQRRDK 443
+ L + +E I +++V ALL+ R N R ++ + + +D
Sbjct: 680 ISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDP 739
Query: 444 VSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSK 477
+S+ Y+ G+ SE+ E + PS+
Sbjct: 740 LSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQ 776
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 198/658 (30%), Positives = 346/658 (52%), Gaps = 39/658 (5%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S++P Y L A + + C + +A +L +V V++ I+ Y K G +D+
Sbjct: 149 SEKPNEYIL-ASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDE 207
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SS 153
AR +FD + + +W A++ Y + G +L+LF M V ++ ++VL S
Sbjct: 208 ARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSM 267
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E LE G KQ+HG +++RGF +V + + ++D Y KC + R++F+ + +K+ VSW
Sbjct: 268 LEFLEGG--KQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWT 325
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ + +A+ +F +M+R+ +P F + L +C L + +G Q+H IK+
Sbjct: 326 TMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKV 385
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ + DD V L +MY KC L +AR ++F
Sbjct: 386 NIDNDDFVKNGLIDMYAKCDSLTNAR-------------------------------KVF 414
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+ + NV+S+NAM+ GY+R EALD MR + +T +L + + L ++
Sbjct: 415 DLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLE 474
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ ++H I + S + F +AL+D+Y KC + AR+ F ++ R D V WNA+ +GY
Sbjct: 475 LSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDR-DIVVWNAMFSGY 533
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
+++ ++EE++ + ++Q +P++FTF ++AA +NI+SL G+Q H VI+ + +
Sbjct: 534 SQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDP 593
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+LV++Y KC +E + + F ++ D+ NSMI + + +ALEVF M E
Sbjct: 594 FVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIME 653
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G+KP+++TF G+L AC H G + L F+SM K+GI P ++HY CM+ L R G + E
Sbjct: 654 GVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYE 712
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
++FV +MP P + R + CR +G+ LG +AA +P + + +N F
Sbjct: 713 AKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIF 770
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/574 (28%), Positives = 297/574 (51%), Gaps = 36/574 (6%)
Query: 62 RKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
+K+ +++V + VFL+N + Y K DA+ LFD MP R+ +W++M+ YTQ
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130
Query: 121 NGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+G+ L LF M N+ A+V+R+ + L + QLHG +VK GF +V
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ +SL+D Y K + +AR +FD ++ K V+W I+ Y G + ++ +F +M D
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGD 250
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ P + ++ L ACS L G QIHG +++ F+ D V+ + + Y+KC +++ R
Sbjct: 251 VYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGR 310
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L ++ +++++SWT++++G + +A +LF EM + WK
Sbjct: 311 KLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKG----------------WKP 354
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
D +LN C L ++ G++VH + + + ++ FV N L+D
Sbjct: 355 ---------------DAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLID 399
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KC +L +AR F + + VS+NA++ GY+R+ + EA+ F EM+ + P+
Sbjct: 400 MYAKCDSLTNARKVF-DLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLL 458
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF +LL +++ LE QIHC +I+ ++ AL++VY+KC C+ A VF+E
Sbjct: 459 TFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEI 518
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
D+++ N+M G+ E+L+++ ++ +KP+ TF ++ A + +++
Sbjct: 519 YDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQ 578
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
QF + + K G+ ++ +Y + G ++E
Sbjct: 579 QFHNQV-IKMGLDDDPFVTNSLVDMYAKCGSIEE 611
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 281/498 (56%), Gaps = 9/498 (1%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H + G L L+D + + AR + D + SWN ++R Y V G
Sbjct: 17 QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHG 72
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ + ++ ++ KMLR +P NFTF L ACS L S EG QIH ++++ F D V
Sbjct: 73 SPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCN 132
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP-ERNVI 342
SL +MY KC RL+ AR D R+ +SW SI+SGY G++ +AR+LF EMP RNV+
Sbjct: 133 SLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVV 192
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLILNVCAGLSEIKMGKEVHG 400
W AM+ GY + + E L M + ++ + T+ +L+ C+ L ++G+ +
Sbjct: 193 CWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV 252
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
FI N N + AL+DMY KCG++ A F +S + + SWNA++TG + G E
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK-NLPSWNAIITGCVQGGLLE 311
Query: 461 EAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ + M+ ++ +P++ T +L+ACA + +LE G+++H ++ RN ++NV+ ALV
Sbjct: 312 EAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALV 371
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC ++ A +F ++S DV + N+MILG ++ GR++L VF M + G++P+ +
Sbjct: 372 DMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDV 431
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF G+L AC H G V+ F SM K+G+ P+LEHY CM+ L R G++KE + V
Sbjct: 432 TFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQN 491
Query: 640 MPFNPTVPMLRKIFDKCR 657
M P + + CR
Sbjct: 492 MLIPPDSIIWGALLSACR 509
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 237/486 (48%), Gaps = 73/486 (15%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L L ++ ++ + ++ + + L+ + I+ + ++D AR + D+ P
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLH----SIDYARFVLDQTPSPT 57
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN+++ AYT +G P +L L+L M S + T+ VL++ + + +Q+H
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY-------- 219
+++ GF ++ + +SL+D Y KC + AR +DD+ ++ VSWN I+ Y
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 220 -------------------LVAGNGKEA-----VVMFFKML--REDIRPLNFTFANALFA 253
++ G GKE + +F +ML ++++P T L A
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 254 CSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
CS L + YE + V I ++ + +++ +L +MY KCG +E A + D +N+ S
Sbjct: 238 CSTLCN-YEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPS 296
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W +I++G G + EA +L+ M ++V
Sbjct: 297 WNAIITGCVQGGLLEEAIDLYRHMKAQSV------------------------------- 325
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+++TL +L+ CAGL +++G+EVH ++ RN N+ ++ AL+DMY KCG + A +
Sbjct: 326 KPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACL 385
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
F + S+ +D WNA++ G A G +++ FS+M + +P+ TF +L+AC +
Sbjct: 386 IFVKTSE-KDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSG 444
Query: 492 SLEQGK 497
+E+G+
Sbjct: 445 LVEEGR 450
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 35/355 (9%)
Query: 21 TPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
+P +L + S +P +++ + + + C++ +++E ++ ++++ +F+
Sbjct: 73 SPQNSLFLYLKMLRSSTKPSNFT-FPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVC 131
Query: 81 NRAIECYGKC-------------------------------GNLDDARGLFDEMP-ERDG 108
N I+ Y KC G ++ AR LF+EMP R+
Sbjct: 132 NSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNV 191
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQLH 166
W AM+ Y + G L LF M S V N T +L + + V + L
Sbjct: 192 VCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLS 251
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I N IL ++L+D Y KC + A R+FD + KN SWN I+ + G +
Sbjct: 252 VFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLE 311
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA+ ++ M + ++P T N L AC+ L + G ++H + + + + ++ +L
Sbjct: 312 EAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALV 371
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+MY KCG+++DA + + E+++ W +++ G A G R++ +F++M V
Sbjct: 372 DMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGV 426
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 18/269 (6%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
L+ I+ Y KCG+++ A +FD + ++ SWNA++ Q G ++L+ M
Sbjct: 264 ILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQ 323
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
V N+IT NVL + A L + +++H + + G NVIL ++LVD Y KC + DA
Sbjct: 324 SVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDA 383
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F K+ WN ++ G+G++++ +F +M+R ++P + TF L AC+
Sbjct: 384 CLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHS 443
Query: 258 SSPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
EG HG+ K++ + ++ + G L++A L+ + +
Sbjct: 444 GLVEEGRVQFSSMADKHGLSPKLEH------YACMVDLLGRAGHLKEAYELV----QNML 493
Query: 311 ISWTSIVSGYAISG-RIREARELFNEMPE 338
I SI+ G +S RI EL +++ E
Sbjct: 494 IPPDSIIWGALLSACRIHRNLELADKISE 522
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 94/237 (39%), Gaps = 40/237 (16%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L ++ Y KCG +DDA +F + E+D WNAM+ +G +L +F M
Sbjct: 364 VILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVR 423
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+GV N +T+ VL + H +V+ G + SS+ D +G +
Sbjct: 424 AGVQPNDVTFIGVLSACN-----------HSGLVEEGR----VQFSSMADKHGLSPKLEH 468
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
M D + AG+ KEA + ML I P + + L AC
Sbjct: 469 YACMVDLLGR---------------AGHLKEAYELVQNML---IPPDSIIWGALLSACRI 510
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLG---SLTEMYVKCGRLEDARGLLDQPDERNI 310
+ +++ I + D +G L+ +Y GR +D + Q E+ I
Sbjct: 511 ----HRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRI 563
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 303/598 (50%), Gaps = 33/598 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ + + K G+L +A +F + ++ ++ ML Y +N + F M + GV
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ +L+ + +L K++H ++ GF NV + +V+ Y KC ++ +A +M
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V WN I+ Y G GK A+ + +M E RP + T + L A + + S
Sbjct: 233 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G IHG ++ FE V +L +MY KCG + AR + D+ + ++SW S++ GY
Sbjct: 293 RIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+G A E+F +M + V ++ VT+
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQV-------------------------------EMTNVTVM 381
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
L+ CA L +++ G+ VH + + + S++ V N+L+ MY KC + A F + Q
Sbjct: 382 GALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL-QH 440
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
+ VSWNA++ GYA+ G+ EA+ F +MQ + +P FT +++ A A +S L Q K I
Sbjct: 441 KTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWI 500
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H VIR C + NV ALV++Y KC + A ++F V N+MI G+ + G
Sbjct: 501 HGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLG 560
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
+ ALE+F MKKE IKP+ +TF +L AC H G V+ Q+F SM+ YG+ P ++HY
Sbjct: 561 KAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGA 620
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M+ L R + E DF+ +MP P + + + CR + LGE AA R+ +L+P
Sbjct: 621 MVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDP 678
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 236/461 (51%), Gaps = 34/461 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
PV Y+ + +L ++C + + + +++ L+ VF + + Y KC +++A
Sbjct: 173 PVVYN-FTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYK 231
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD MPERD WN ++ Y QNGF LEL L M G + IT ++L + A+
Sbjct: 232 MFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGS 291
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + + +HG ++ GF V + ++LVD Y KC + AR +FD + K VSWN ++
Sbjct: 292 LRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDG 351
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G+ A+ +F KM+ E + N T AL AC+ L +G +H ++ +++ D
Sbjct: 352 YVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSD 411
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V+ SL MY KC R++ A + + + ++SW +++ GYA +GRI EA + F +M
Sbjct: 412 VSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQL 471
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+N+ D T+ ++ A LS + K +
Sbjct: 472 QNI-------------------------------KPDSFTMVSVIPALAELSVLPQAKWI 500
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG + R N+FV+ AL+DMY KCG + +AR F M +R +WNA++ GY G
Sbjct: 501 HGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH-VTTWNAMIDGYGTHGL 559
Query: 459 SEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F +M+ E +P++ TF +L+AC++ +E+G Q
Sbjct: 560 GKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQ 600
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 192/608 (31%), Positives = 312/608 (51%), Gaps = 48/608 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + Y + G+L AR +FD + +D SWN+M+ AY+Q+G LELF M+
Sbjct: 42 VVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD- 100
Query: 137 SGVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
V + ITYA++L S+ E LELG K++H + + F + L ++L++ Y KC V+
Sbjct: 101 --VEPDSITYASILGACSAMELLELG--KEVHARVSRSRFKSDPALAAALINMYSKCGVL 156
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
ARR+FD IQ+ + WN ++ + G +EA+ +F +M E +R ++ L AC
Sbjct: 157 ESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSAC 216
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
L +EG++IH + D VV ++ MY KC +++ AR + D +E+
Sbjct: 217 CALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKT----- 271
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
NV+SWN+M+A Y +S +EAL+ LM++
Sbjct: 272 -------------------------NVVSWNSMIAAYAQSGRGREALELYELMKEEGVQP 306
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D +T L C G E+H I + +++F+ A+++MY KCG L +A +F
Sbjct: 307 DDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYF 366
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSL 493
+M +R++ V+W+A++ + ++G EA+ + M E +PS+ T LAAC+ I +L
Sbjct: 367 EKM-RRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGAL 425
Query: 494 EQGKQIHCFV-----IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
++GK IH + ++NC + + +L+ +Y KC CL A +F D N+
Sbjct: 426 QEGKAIHSRIQATETLQNC----LFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNT 481
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+I+G H+ E L + G M ++G+ PD++TF +LLAC H G + F SM Y
Sbjct: 482 IIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMTGDY 541
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
I P L+HYEC++ + R G+ +E E MPF P + C+ +G G A
Sbjct: 542 CIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHGETKRGVEA 601
Query: 669 ARRLNELN 676
AR L EL
Sbjct: 602 ARSLLELG 609
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 221/459 (48%), Gaps = 38/459 (8%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G N +T++ V S + EL + I F NV++++SLV AY + + A
Sbjct: 5 GFRPNGVTFSGVASSCSGREEL---DTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSA 61
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD I+NK+ +SWN +V Y G+G+E + +F KM D+ P + T+A+ L ACS +
Sbjct: 62 RKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAM 118
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G ++H + + F+ D + +L MY KCG LE AR
Sbjct: 119 ELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESAR------------------ 160
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+F+ + + WNAM++G + +EAL M+ + ID+V
Sbjct: 161 -------------RVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKV 207
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+ IL+ C L ++ G +H ++ V A+ +MY KC + AR F M
Sbjct: 208 SYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGM 267
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+++ + VSWN+++ YA+ G+ EA+ + M+ E +P T+ L AC + +G
Sbjct: 268 NEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKG 327
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+IH + + +V A+V +Y KC LE A+ F++ + + ++M+ F
Sbjct: 328 AEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQ 387
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
REAL+++ M EG +P IT G L AC G ++
Sbjct: 388 GYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQ 426
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 229/466 (49%), Gaps = 42/466 (9%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDA 96
EP S + YA + C++ + + +++ + + + + + P L I Y KCG L+ A
Sbjct: 102 EPDSIT-YASILGACSAMELLELGKEVHARVSRSRFKSDPA-LAAALINMYSKCGVLESA 159
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SA 154
R +FD + D WNAM+ Q+G L LF M V ++++Y +L + +
Sbjct: 160 RRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCAL 219
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWN 213
E+L G+ ++H G ++++E+++ + Y KC + AR+MFD + K N VSWN
Sbjct: 220 EDLHEGI--RIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWN 277
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y +G G+EA+ ++ M E ++P + T+A AL AC+ +G +IH I +
Sbjct: 278 SMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITES 337
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D + ++ MY KCG LE A ++ +N ++W+++V + G REA +L+
Sbjct: 338 KIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLY 397
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
M G+ S ++TL L C+ + ++
Sbjct: 398 LRMVSE----------GFQPS---------------------EITLAGALAACSRIGALQ 426
Query: 394 MGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
GK +H I + N +F+ N+LL+MY KCG L A F + QRRD SWN ++ G
Sbjct: 427 EGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNL-QRRDSFSWNTIIVG 485
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
+A G +E ++ EM Q P TF +L AC++ L++G+
Sbjct: 486 HAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGR 531
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 216/479 (45%), Gaps = 83/479 (17%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
ML E RP TF+ +C S E I I DF + VV SL Y + G
Sbjct: 1 MLLEGFRPNGVTFSGVASSC---SGREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L AR + D + +++ISW S+V Y+ G E ELF
Sbjct: 58 LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELF--------------------- 96
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
RK + D +T IL C+ + +++GKEVH + R+ + S+ ++
Sbjct: 97 -------------RKMDVEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALA 143
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET- 473
AL++MY KCG L SAR F + Q D WNA+++G + G++ EA+ F M+ E+
Sbjct: 144 AALINMYSKCGVLESARRVFDGI-QSVDPSPWNAMISGLVQHGRAREALGLFERMKAESV 202
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
R K ++ T+L+AC + L +G +IH + ++V A+ +Y+KC ++ A +
Sbjct: 203 RIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARK 262
Query: 534 VFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC---- 588
+F + +V+ NSMI + + RGREALE++ LMK+EG++PD IT+ G L AC
Sbjct: 263 MFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYG 322
Query: 589 -------IHE------------------------GNVKLALQFFDSMRCKYGIIPQLEHY 617
IH G ++ A+ +F+ MR K + +
Sbjct: 323 GSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVT-----W 377
Query: 618 ECMIKLYCRYGYMKELEDFVNRM---PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
M+ + + GY +E D RM F P+ L C + G G+ R+
Sbjct: 378 SAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQ 436
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA C S + ++ S + VFL + Y KCG L+ A F++M
Sbjct: 311 YAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMR 370
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ +W+AM+GA+ Q G+ L+L+L M G ++IT A L + + L K
Sbjct: 371 RKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKA 430
Query: 165 LHGLIVKRGFCGNVI-LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H I N + L++SL++ Y KC + A MF ++Q +++ SWN I+ + G
Sbjct: 431 IHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHG 490
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV-- 281
+ E + + +M+++ + P TFA L ACS + G+ G + GD +
Sbjct: 491 DVDEVLSLHGEMVQDGVDPDYVTFACVLLACS-----HAGLLDRGRSHFLSMTGDYCIKP 545
Query: 282 ----LGSLTEMYVKCGRLEDARGL-LDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
L ++ + G +A L + P ++WT+++ + G + E +
Sbjct: 546 MLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHGETKRGVEAARSL 605
Query: 337 PE 338
E
Sbjct: 606 LE 607
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 206/696 (29%), Positives = 334/696 (47%), Gaps = 73/696 (10%)
Query: 3 GNAATILK-NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEA 61
G+ T +K SPKPT S H K V+ Y+ L Q C S +
Sbjct: 40 GHTTTTIKLKFNGPDSPKPT---------SIHTKPASDVNPLPYSSLIQDCIDSNSFQRG 90
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD---ARGLFDEMPERDGGSWNAMLGAY 118
+ + + +++ P +L+ + + Y + G LDD AR LF+EMPER+ +WN M+ AY
Sbjct: 91 KSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAY 150
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ +F M GV + T+A+ LR KQ+H ++ GF G+
Sbjct: 151 ARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT 210
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++L+D Y KC ++FD++ +N V+WN I+ G+ +A+V+F +M
Sbjct: 211 FVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQES 270
Query: 239 D--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+ I+P FTF L C+ + +G QIH +I+ + + +V L MY +C
Sbjct: 271 EDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSEC---- 326
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
GR+ A+E+FN M ERN SWN+M+ GY ++
Sbjct: 327 ---------------------------GRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGE 359
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+EAL M+ D +L +L+ C LS+ + G+E+H FI RN +
Sbjct: 360 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV 419
Query: 417 LLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
L+DMY KCG++ A +++ + + R+ WN++L GYA +G +E+ F EM
Sbjct: 420 LVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEM----LE 475
Query: 476 SKFTFETL-LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
S ++ L + N+ LE ALV++Y+KC + A V
Sbjct: 476 SDIEYDVLTMVTIVNLLVLET---------------------ALVDMYSKCGAITKARTV 514
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + +++ N+MI G+ + +EAL ++ M K+G+ P+ +TF IL AC H G V
Sbjct: 515 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLV 574
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ L+ F SM+ Y I + EHY CM+ L R G +++ ++FV +MP P V +
Sbjct: 575 EEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG 634
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR + +G AA+RL EL+P P + I +N +
Sbjct: 635 ACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIY 670
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 159/345 (46%), Gaps = 37/345 (10%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
L +P +SL + + C S + R+L + +V L ++ Y KCG+
Sbjct: 371 QLNGIKPDCFSL-SSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 429
Query: 93 LDDARGLFDEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
+D A ++D+ ++D + WN++L Y G + FL+M S + + +T ++
Sbjct: 430 MDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 489
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++LE++LVD Y KC +T AR +FD++ KN V
Sbjct: 490 NL-------------------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIV 524
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SWN ++ Y G KEA++++ +M ++ + P TF L ACS EG++I +
Sbjct: 525 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 584
Query: 271 IK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAIS----- 323
+ + E + ++ + GRLEDA+ +++ P E + +W +++ +
Sbjct: 585 QEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDM 644
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
GR+ A+ LF E+ +N + M Y + WKE D +M+
Sbjct: 645 GRL-AAQRLF-ELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMK 687
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 185/620 (29%), Positives = 325/620 (52%), Gaps = 41/620 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ + + Y KC ++ A +F+ + ER+ WNAM+ Y NG + +ELF+DM
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG + + T+ ++L + A +L + Q H +I+K+ N+ + ++LVD Y KC + D
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALED 481
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++F+ + +++ VSWN I+ Y+ N EA +F +M I A+ L AC+
Sbjct: 482 ARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTN 541
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVL---GSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
+ Y+G Q+H + +K G D VL SL +MY KCG +ED
Sbjct: 542 VHGLYQGKQVHCLSVKC---GLDRVLHTGSSLIDMYSKCGIIED---------------- 582
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
AR++F+ MPE +V+S NA++AGY+++ L + + F ++ K +
Sbjct: 583 ---------------ARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTKGV-N 626
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARI 432
++T I+ C + +G + HG I + +SS ++ +LL +Y + A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACA 686
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F ++S + V W +++G+++ G EEA+ + EM+ + P + TF T+L C+ +S
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLS 746
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMI 550
SL +G+ IH + ++++ + L+++Y KC ++ + +VF E +V+ NS+I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ N +AL++F M++ I PD ITF G+L AC H G V + F+ M +YGI
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
+++H CM+ L R+GY++E +DF+ P + + CR +G GE AA
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAE 926
Query: 671 RLNELNPWAPFQFKITTNRF 690
RL EL P + + +N +
Sbjct: 927 RLIELEPQNSSAYVLLSNIY 946
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 288/620 (46%), Gaps = 41/620 (6%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N ++ Y KC + A F+ + E+D +WN+ML Y+ G PG+ L F+ + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENL 155
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ N+ T++ VL +SA E + +Q+H ++K G N +LVD Y KC + DA+
Sbjct: 156 IFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQ 215
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+FD I + N V W + Y+ AG +EAV++F +M E RP + F + L
Sbjct: 216 RVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLG 275
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLG---------------------SLTEMYVKCGRLED 297
+ + G + D +V++ S+ G +
Sbjct: 276 KLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLS 335
Query: 298 ARGLLDQPD--------------ERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
A G++ D NI +S+VS Y+ ++ A ++F + ERN +
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVL 395
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAM+ GY + + ++ M+ + +ID T +L+ CA +++MG + H I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + N+FV NAL+DMY KCG L AR F M RD VSWN ++ GY + EA
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD-RDNVSWNTIIGGYVQDENESEAF 514
Query: 464 TSFSEMQWETRPSKFT-FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M S + L AC N+ L QGKQ+HC ++ + + +L+++Y
Sbjct: 515 DLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMY 574
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC +E A +VF V+ N++I G+ N EA+ +F M +G+ P ITF
Sbjct: 575 SKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFA 633
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE-CMIKLYCRYGYMKELEDFVNRMP 641
I+ AC ++ L QF + K+G + E+ ++ LY M E + +
Sbjct: 634 TIVEACHKPESLTLGTQFHGQI-IKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELS 692
Query: 642 FNPTVPMLRKIFDKCRKNGY 661
++ + + +NG+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGF 712
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 231/458 (50%), Gaps = 35/458 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L CA S + + S ++ T +F+ N ++ Y KCG L+DAR +F+ M
Sbjct: 431 FTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMC 490
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD SWN ++G Y Q+ +LF+ MN G+ ++ A+ L++ L KQ
Sbjct: 491 DRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQ 550
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L VK G + SSL+D Y KC ++ DAR++F + + VS N ++ Y N
Sbjct: 551 VHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNN 609
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG- 283
+EAVV+F +ML + + P TFA + AC S G Q HG IIK F + LG
Sbjct: 610 LEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGI 669
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL +Y+ R+ +A L + ++I+ WT ++SG++ +G
Sbjct: 670 SLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNG------------------ 711
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
++EAL F MR DQ T +L VC+ LS ++ G+ +H I
Sbjct: 712 -------------FYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLI 758
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ + SN L+DMY KCG+++S+ F +M +R + VSWN+++ GYA+ G +E+A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ F M Q P + TF +L AC++ + G++I
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 249/528 (47%), Gaps = 39/528 (7%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L L + K +H + G L +++VD Y KC ++ A + F+ ++ K+ +WN ++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSML 132
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G + + F + I P FTF+ L + ++ G QIH +IK+ E
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG------------ 324
+ G+L +MY KC RL DA+ + D + N + WT + SGY +G
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252
Query: 325 -----------------------RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
++++AR LF EMP +V++WN M++G+ + A+
Sbjct: 253 RGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAI 312
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
++ MRK++ + TLG +L+ ++ + +G VH + +SNI+V ++L+ MY
Sbjct: 313 EYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTF 480
KC + +A F + +R D V WNA++ GYA G+S + M F +M+ FTF
Sbjct: 373 SKCEKMEAAAKVFEALEERND-VLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+LL+ CA LE G Q H +I+ N+ ALV++Y KC LE A ++F+
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD 491
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D + N++I G+ +E EA ++F M GI D L AC + + Q
Sbjct: 492 RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQV 551
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ K G+ L +I +Y + G +++ + MP V M
Sbjct: 552 H-CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSM 598
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 279/497 (56%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F IQ N +SWN ++R + ++ + A+ ++ M+ + P ++TF +C+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIH I+K D V SL MY + G +EDA + D R+++S+T++
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G + +A+++F+E+P ++V+SWNAM++GY +KEAL+ M K D+
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +L+ C +++G+++H +I + + SN+ + NAL+D+Y KCG + A F
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+ Q +D +SWN ++ GYA +EA+ F EM + P+ T ++L ACA++ +++
Sbjct: 271 L-QYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDI 329
Query: 496 GKQIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + I N + +L+++Y KC +E A +VF + + CN+MI GF
Sbjct: 330 GRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGF 389
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++ MKK+GI+PD ITF G+L AC H G L + F SM Y I P+
Sbjct: 390 AMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPK 449
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L R G KE E+ +N M P + + C+ + LGE A++L
Sbjct: 450 LEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLM 509
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 510 KIEPKNPGSYVLLSNIY 526
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 201/438 (45%), Gaps = 66/438 (15%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F + E + SWN M+ + + P L L++ M G+S N T+ + +S A+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA------------------ 197
KQ+H I+K G ++ + +SL+ Y + ++ DA
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 198 -------------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++MFD+I K+ VSWN ++ Y G KEA+ +F +M++ D++P
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T A L C+ + G QIH I F + ++ +L ++Y KCG +E A GL +
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GYA +EA +F E
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQE----------------------------- 301
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M K + + VT+ IL CA L I +G+ +H +I + +N + +L+DMY
Sbjct: 302 --MLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYA 359
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KCGN+ +A F + + S NA++ G+A G+++ A S M+ + P TF
Sbjct: 360 KCGNIEAANQVFDTI-LNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFV 418
Query: 482 TLLAACANISSLEQGKQI 499
LL+AC++ + G++I
Sbjct: 419 GLLSACSHAGLSDLGRKI 436
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 171/362 (47%), Gaps = 51/362 (14%)
Query: 30 ISGHLKSDEPVS-YSLYAH---------------LFQLCASSKAIVEARKLESNLVTFYP 73
I GH S +P+S +LY + LF+ CA SKA E +++ + ++ +
Sbjct: 50 IRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGL 109
Query: 74 TPPVFLLNRAIECYGKCG-------------------------------NLDDARGLFDE 102
T + + I Y + G N+D A+ +FDE
Sbjct: 110 TVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDE 169
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+P +D SWNAM+ Y + G LELF +M V ++ T A VL + + +
Sbjct: 170 IPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELG 229
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+H I GF N+ L ++L+D Y KC M A +F+ +Q K+ +SWN ++ Y
Sbjct: 230 RQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYI 289
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG---DD 279
+ KEA+++F +ML+ P + T + L AC+ L + G IH V I +G +
Sbjct: 290 NHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIH-VYIDKKLKGIITNT 348
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+ SL +MY KCG +E A + D +++ S +++ G+A+ GR A +L + M +
Sbjct: 349 SLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKD 408
Query: 340 NV 341
+
Sbjct: 409 GI 410
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 33/318 (10%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+K D S A + C S + R++ S + + L+N I+ Y KCG +
Sbjct: 202 MKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEM 261
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+ A GLF+ + +D SWN ++G Y L +F +M G + N +T ++L +
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPAC 321
Query: 154 AEELELGVSKQLHGLIVK--RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
A + + + +H I K +G N L++SL+D Y KC + A ++FD I NK+ S
Sbjct: 322 AHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSS 381
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
N ++ + + G A + +M ++ I P + TF L ACS G +I
Sbjct: 382 CNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI----- 436
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
S+T LD E + + ++ SG +EA E
Sbjct: 437 ----------FKSMT---------------LDYRIEPKLEHYGCMIDLLGRSGLFKEAEE 471
Query: 332 LFNEMP-ERNVISWNAML 348
L N M E + + W ++L
Sbjct: 472 LINSMTMEPDGVIWGSLL 489
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 195/678 (28%), Positives = 346/678 (51%), Gaps = 47/678 (6%)
Query: 4 NAATILKNILSK---SSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVE 60
+A TI + + K +S TP+ HL+ V L + C ++ + +
Sbjct: 33 SALTITHSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVD------LLRDCVDARFLKQ 86
Query: 61 ARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
A+ + L+ F + LLN Y KC ++D A LFD+M +R+ SW ++
Sbjct: 87 AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGL 146
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELGVSKQLHGLIVKRGFCG 176
+NG E F +M G+ +Q Y+ +L+ + +ELG +H IV RGF
Sbjct: 147 AENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG--NMVHAQIVIRGFTS 204
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ + ++L++ Y K + D+ ++F+ + N VSWN ++ + +A +F +M+
Sbjct: 205 HTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMM 264
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
E + P TF A L + ++ G +++ + + +V +L +M KCG L+
Sbjct: 265 GEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQ 324
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+AR SI + + I+ R FN WNAM++GY RS
Sbjct: 325 EAR---------------SIFNSHFITCR-------FNA-------PWNAMISGYLRSGF 355
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSN 415
++AL+ M + +D T + N A L + +GK+VH ++ N + +SN
Sbjct: 356 NEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISN 415
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
A+ + Y KCG+L R F +M + RD +SW +++T Y++ + ++A+ FS M+ E
Sbjct: 416 AVANAYAKCGSLEDVRKVFNRM-EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P++FTF ++L +CAN+ LE G+Q+H + + +++ ALV++Y KC CL A +V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F S+ D + ++I G + +AL++F M + G++P+ +TF +L AC H G V
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ LQ+F M+ YG++P++EHY C++ L R G++ + +F++RMP P + + +
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 655 KCRKNGYATLGEWAARRL 672
CR +G LGE AA+++
Sbjct: 655 ACRVHGNVELGELAAQKI 672
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 176/356 (49%), Gaps = 36/356 (10%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAI-----VEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
++D + + Y +F A+ K + V AR ++S L Y V + N Y K
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNY----VSISNAVANAYAK 423
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG+L+D R +F+ M +RD SW +++ AY+Q + +E+F +M G++ NQ T+++V
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L S A L +Q+HG+I K G + +ES+LVD Y KC + DA+++F+ I N +
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ---- 265
VSW I+ + G +A+ +F +M++ + P TF LFACS EG+Q
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603
Query: 266 ---IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYA 321
+G++ +++ + ++ + G L DA + + P E N + W +++
Sbjct: 604 MKKTYGLVPEMEH------YACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACR 657
Query: 322 ISGRIREARELFNEMPERNVISWNA--------MLAGYTRSLLWKEALDFVFLMRK 369
+ G + E+ + ++S+ A + Y S +K+ L LM++
Sbjct: 658 VHGNVE-----LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKE 708
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 313/604 (51%), Gaps = 35/604 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + + Y KC +D A+ +F+ + ER+ WNAMLG + QNG +E F M
Sbjct: 344 VYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKR 403
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G ++ T+ ++ + A L QLH +++K F N+ + ++LVD Y K + +
Sbjct: 404 HGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKE 463
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR+ F+ ++ + VSWN I+ Y+ EA MF +M+ + P + A+ + AC+
Sbjct: 464 ARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACAN 523
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G Q H +++K+ + SL +MYVKCG
Sbjct: 524 VQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGV---------------------- 561
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ AR++F MP RNV+S NA++AGYT L +EA+ ++ +
Sbjct: 562 ---------VLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKPTE 611
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT +L+ C G + +G+++HG + + + SS+ V +LL +Y + F
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFS 671
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
++ + V W A+++GYA++ E+A+ + M+ + P + F ++L ACA +SSL+
Sbjct: 672 ELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQ 731
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD-VIICNSMILGF 553
G++IH + + ++ V +L+++Y KC ++ +++VF+E + VI NSMI+G
Sbjct: 732 NGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGL 791
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N EALE+F M+++ I PD +TF G+L AC H G V + FD M Y + P+
Sbjct: 792 AKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPR 851
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++H CM+ + R+G++ E E+F+N++ + + CRK+G G+ AA +L
Sbjct: 852 VDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLM 911
Query: 674 ELNP 677
EL P
Sbjct: 912 ELKP 915
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 252/519 (48%), Gaps = 38/519 (7%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +K +H +K G +L + +VD Y KC + A++ F ++ K+ +WN ++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
YL G V F M ++RP FTFA L ACS L G Q+H + K F
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS--------------- 323
G L +MY KC L DAR + D + +SWT++++GY
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236
Query: 324 --------------------GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
GR+ +AR+LF ++P NV++WN M++G+ + +EA+ F
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
++KT + +LG +L+ A LS + G VH + N++V +AL++MY K
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
C + +A+ F + + R+ V WNA+L G+A+ G ++E M FS M+ +P +FTF +
Sbjct: 357 CSKMDAAKQVFNSLGE-RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+ +ACA++ L G Q+H +I+N + N+ ALV++Y K L+ A + F+ D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+ N++I+G+ E EA +F M G+ PD ++ I+ AC + +K Q
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQ-CH 534
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ K G+ +I +Y + G + D MP
Sbjct: 535 CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/617 (27%), Positives = 275/617 (44%), Gaps = 57/617 (9%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
+EA K+ + P L + Y G L DAR LF ++P + +WN M+ +
Sbjct: 225 MEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGH 284
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ GF + FL++ +G+ A + + +VL + A L +H K G NV
Sbjct: 285 AKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNV 344
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ S+LV+ Y KC M A+++F+ + +N V WN ++ + G +E + F M R
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRH 404
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+P FTF + AC+ L G Q+H V+IK F + V +L +MY K G L++A
Sbjct: 405 GPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEA 464
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R + + +SW +I+ GY EA +F M V+
Sbjct: 465 RKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLP--------------- 509
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
D+V+L I++ CA + E+K G++ H + + ++ ++L+
Sbjct: 510 ----------------DEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLI 553
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
DMY KCG + +AR FY M R+ VS NA++ GY G EEA+ F E+Q +P++
Sbjct: 554 DMYVKCGVVLAARDVFYSMPS-RNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTE 611
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYAIRVF 535
TF LL C L G+QIH V++ + +VC L CL + F
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLL--------CLYMNSQRF 663
Query: 536 KESSSL--------DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+S +L +++ ++I G+ +AL+ + M+ + I PD F +L A
Sbjct: 664 VDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRA 723
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRMPFNPT 645
C +++ Q S+ G ++ C +I +Y + G +K MP
Sbjct: 724 CAGMSSLQNG-QEIHSLIFHTGF--NMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNN 780
Query: 646 VPMLRKIFDKCRKNGYA 662
V + KNGYA
Sbjct: 781 VISWNSMIVGLAKNGYA 797
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 33 HLKSDEPV-SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
H++SD + + +A + + CA ++ +++ S + + I+ Y KCG
Sbjct: 704 HMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCG 763
Query: 92 NLDDARGLFDEMPERDGG-SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
++ + +F EMP R+ SWN+M+ +NG+ LE+F M + +++T+ VL
Sbjct: 764 DVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVL 823
Query: 151 RSSAEELELGVSKQLHGLIV 170
+ + + +++ L+V
Sbjct: 824 SACSHAGRVSEGRKVFDLMV 843
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 195/678 (28%), Positives = 346/678 (51%), Gaps = 47/678 (6%)
Query: 4 NAATILKNILSK---SSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVE 60
+A TI + + K +S TP+ HL+ V L + C ++ + +
Sbjct: 33 SALTITHSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVD------LLRDCVDARFLKQ 86
Query: 61 ARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
A+ + L+ F + LLN Y KC ++D A LFD+M +R+ SW ++
Sbjct: 87 AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGL 146
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELGVSKQLHGLIVKRGFCG 176
+NG E F +M G+ +Q Y+ +L+ + +ELG +H IV RGF
Sbjct: 147 AENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG--NMVHAQIVIRGFTS 204
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ + ++L++ Y K + D+ ++F+ + N VSWN ++ + +A +F +M+
Sbjct: 205 HTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMM 264
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
E + P TF A L + ++ G +++ + + +V +L +M KCG L+
Sbjct: 265 GEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQ 324
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+AR SI + + I+ R FN WNAM++GY RS
Sbjct: 325 EAR---------------SIFNSHFITCR-------FNA-------PWNAMISGYLRSGF 355
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSN 415
++AL+ M + +D T + N A L + +GK+VH ++ N + +SN
Sbjct: 356 NEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISN 415
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
A+ + Y KCG+L R F +M + RD +SW +++T Y++ + ++A+ FS M+ E
Sbjct: 416 AVANAYAKCGSLEDVRKVFNRM-EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIA 474
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P++FTF ++L +CAN+ LE G+Q+H + + +++ ALV++Y KC CL A +V
Sbjct: 475 PNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKV 534
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F S+ D + ++I G + +AL++F M + G++P+ +TF +L AC H G V
Sbjct: 535 FNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLV 594
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ LQ+F M+ YG++P++EHY C++ L R G++ + +F++RMP P + + +
Sbjct: 595 EEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLG 654
Query: 655 KCRKNGYATLGEWAARRL 672
CR +G LGE AA+++
Sbjct: 655 ACRVHGNVELGELAAQKI 672
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 165/325 (50%), Gaps = 28/325 (8%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAI-----VEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
++D + + Y +F A+ K + V AR ++S L Y V + N Y K
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNY----VSISNAVANAYAK 423
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG+L+D R +F+ M +RD SW +++ AY+Q + +E+F +M G++ NQ T+++V
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L S A L +Q+HG+I K G + +ES+LVD Y KC + DA+++F+ I N +
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ---- 265
VSW I+ + G +A+ +F +M++ + P TF LFACS EG+Q
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603
Query: 266 ---IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYA 321
+G++ +++ + ++ + G L DA + + P E N + W +++
Sbjct: 604 MKKTYGLVPEMEH------YACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACR 657
Query: 322 ISGRIREARELFNEMPERNVISWNA 346
+ G + E+ + ++S+ A
Sbjct: 658 VHGNVE-----LGELAAQKILSFKA 677
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 285/497 (57%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P +TF L +C+
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ ++ D V SL MYV+ GRLEDAR + DQ R+++S+T++
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G I A+++F+E+P ++V+SWNAM++GY + KEAL+ M KT D+
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA + I++G++VH +I + + SN+ + NAL+D+Y KCG + +A F
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D +SWN ++ GY +EA+ F EM + P+ T ++L ACA++ ++E
Sbjct: 281 LSY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEI 339
Query: 496 GKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + R +L+++Y KC +E A +VF + + N+MI GF
Sbjct: 340 GRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGF 399
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++F M+K I+PD ITF G+L AC H G + L F SM+ Y I P+
Sbjct: 400 AMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 459
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE E+ +N M P + + C+ +G LGE A+ L
Sbjct: 460 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 519
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 520 KIEPKNPGSYVLLSNIY 536
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 249/546 (45%), Gaps = 105/546 (19%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P L L++ M G+ N T+ +L+S A+
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR----------------- 198
+Q+HG ++K G+ ++ + +SL+ Y + + DAR
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 199 --------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+MFD+I K+ VSWN ++ Y GN KEA+ +F +M++ ++RP
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + + AC+ +S G Q+H I F + ++ +L ++Y+KCG +E A GL +
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY T L+KEAL
Sbjct: 281 LSYKDVISWNTLIGGY-------------------------------THMNLYKEALLLF 309
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-----DYSSNIFVSNALLD 419
M ++ + + VT+ IL CA L I++G+ +H +I++ + SS+ +L+D
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH---RTSLID 366
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKF 478
MY KCG++ +A+ F + R SWNA++ G+A G++ A FS M+ E P
Sbjct: 367 MYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF LL+AC++ L+ G+ I R+ E +K +
Sbjct: 426 TFVGLLSACSHSGMLDLGRHI----FRSMKE------------------------DYKIT 457
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
L+ C +LG H+ +EA E+ M+ E PD + + +L AC GNV+L
Sbjct: 458 PKLEHYGCMIDLLG--HSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELGE 512
Query: 599 QFFDSM 604
+ ++
Sbjct: 513 SYAQNL 518
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 206/482 (42%), Gaps = 87/482 (18%)
Query: 32 GHLKSDEPVSYSLYAH-----------------LFQLCASSKAIVEARKLESNLVTFYPT 74
GH S +PVS +LY + L + CA SKA E +++ +++
Sbjct: 62 GHALSSDPVS-ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 75 PPVFLLNRAIECYGKCGNLDDARG-------------------------------LFDEM 103
+++ I Y + G L+DAR +FDE+
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P +D SWNAM+ Y + G LELF +M + V ++ T +V+ + A+ + + +
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 240
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H I GF N+ + ++L+D Y KC + A +F+ + K+ +SWN ++ Y
Sbjct: 241 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN 300
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDV 280
KEA+++F +MLR P + T + L AC+ L + G IH V I +G
Sbjct: 301 LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH-VYINKRLKGVANASS 359
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
SL +MY KCG +E A+ + D R++ SW +++ G+A+ GR A ++F+
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSR----- 414
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
MRK + D +T +L+ C+ + +G+ +
Sbjct: 415 --------------------------MRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 401 FIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ + DY + + ++D+ G + A M D V W ++L G
Sbjct: 449 SM-KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN 507
Query: 459 SE 460
E
Sbjct: 508 VE 509
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 284/497 (57%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD IQ + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG Q+HG ++K F+ D + SL MYV+ GRLEDA+ + D+ R+++S+T++
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G I A ++F+E+P ++V+SWNA ++GY + +KEAL+ M KT D+
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +L+ CA I++G++VH +I+ + + N+ + NAL+D+Y KCG L +A F
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D +SWN ++ GY +EA+ F +M + +P+ T ++L+ACA++ +++
Sbjct: 296 LSN-KDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDI 354
Query: 496 GKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + R +L+++Y KC +E A +VF + + N+MI GF
Sbjct: 355 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF 414
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++F M+K GI+PD ITF G+L AC H G + L F SM Y ++P+
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPK 474
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE E +N M P + + C+ +G LGE A+ L
Sbjct: 475 LEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 534
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 535 KIEPENPGSYVLLSNIY 551
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 239/543 (44%), Gaps = 99/543 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +FD + E WN M + + P L+L++ M G+ N T+ +L+S A+
Sbjct: 56 AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR----------------- 198
+QLHG ++K GF ++ + +SL+ Y + + DA+
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175
Query: 199 --------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+MFD+I K+ VSWN + Y GN KEA+ +F KM++ ++RP
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T L AC+ S G Q+H I F + ++ +L ++Y KCG LE A GL
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ G YT L+KEAL
Sbjct: 296 LSNKDVISWNTLIGG-------------------------------YTHMNLYKEALLLF 324
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + + VT+ IL+ CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KCG++ +A+ F M R SWNA++ G+A G++ A FS M+ P TF
Sbjct: 385 KCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 443
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC++ L+ G+ I + R+ +K L
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMTRD----------------------------YKLMPKL 475
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+ C MI H+ +EA ++ M+ E PD + + +L AC GNV+L +
Sbjct: 476 EHYGC--MIDLXGHSGLFKEAEKMINTMEME---PDGVIWCSLLKACKMHGNVELGESYA 530
Query: 602 DSM 604
++
Sbjct: 531 QNL 533
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 197/458 (43%), Gaps = 70/458 (15%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA-- 96
P SY+ + L + CA S A E ++L ++ F +++ I Y + G L+DA
Sbjct: 101 PNSYT-FPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQK 159
Query: 97 ----------------------RG-------LFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
RG +FDE+P +D SWNA + Y + G
Sbjct: 160 VXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEA 219
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF M + V ++ T VL + A+ + + +Q+H I GF N+ + ++L+D
Sbjct: 220 LELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDL 279
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F + NK+ +SWN ++ Y KEA+++F MLR +P + T
Sbjct: 280 YSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTM 339
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G + SL +MY KCG +E A+ + D
Sbjct: 340 LSILSACAHLGAIDIGRWIH-VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDS 398
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
R++ SW +++ G+A+ GR A ++F+
Sbjct: 399 MLNRSLSSWNAMIFGFAMHGRANAAFDIFSR----------------------------- 429
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIFVSNALLDMYR 422
MRK + D +T +L+ C+ + +G+ + + R DY + ++D+
Sbjct: 430 --MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTR-DYKLMPKLEHYGCMIDLXG 486
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
G + A M D V W ++L G E
Sbjct: 487 HSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVE 524
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 170/389 (43%), Gaps = 36/389 (9%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K + +++ DE S + CA S +I R++ S + + ++N I+ Y
Sbjct: 225 KMMKTNVRPDE----STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLY 280
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KCG L+ A GLF + +D SWN ++G YT L LF DM SG N +T
Sbjct: 281 SKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTML 340
Query: 148 NVLRSSAEELELGVSKQLHGLIVKR--GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
++L + A + + + +H I KR G L +SL+D Y KC + A+++FD +
Sbjct: 341 SILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSML 400
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
N++ SWN ++ + + G A +F +M + I P + TF L ACS + GM
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS-----HSGML 455
Query: 266 IHGVIIKIDFEGDDVVL------GSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVS 318
G I D ++ G + ++ G ++A +++ + E + + W S++
Sbjct: 456 DLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLK 515
Query: 319 GYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKE-ALDFVFLMRKTTKD 373
+ G + A+ L PE N S+ + Y + W E A L K K
Sbjct: 516 ACKMHGNVELGESYAQNLIKIEPE-NPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKK 574
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ G S I++ VH FI
Sbjct: 575 V------------PGCSSIEIDSVVHEFI 591
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 320/640 (50%), Gaps = 35/640 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + + L C K + + + + + L+ V+L N + Y KCG++ A+
Sbjct: 7 PPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKL 66
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRT--LELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ + +D SWN ++ Y+Q G G + +ELF M N T++ V +++
Sbjct: 67 VFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSS 126
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
E Q H L +K +V + SSL++ Y K M DAR++FD I +N VSW I+
Sbjct: 127 PETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y + EA +F M RE+ F + + L A + + G QIH + +K
Sbjct: 187 SGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL 246
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L MY KCG L+DA + + +SG
Sbjct: 247 SIASVGNALVTMYGKCGCLDDA------------------LKTFELSG------------ 276
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+++ I+W+AM+ GY ++ EAL+ + M + T ++N C+ + ++ GK
Sbjct: 277 -DKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGK 335
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++HG+ + Y I+ AL+DMY KCG+L AR F + + D V W ++++GYA+
Sbjct: 336 QIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEP-DIVLWTSMISGYAQN 394
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G++E A+T + MQ E P + T ++L AC+++++LEQGKQIH I+ + + V
Sbjct: 395 GENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIG 454
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL +Y KC LE VF+ S D++ N+MI G N G +ALE+F ++ K
Sbjct: 455 SALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTK 514
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD++TF +L AC H G V+ +F M ++GI+P++EHY CM+ + R G + E ++
Sbjct: 515 PDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKE 574
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
F+ + + + R + CR LG +A +L EL
Sbjct: 575 FIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMEL 614
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
HL ++P ++ + + C+ A+ E +++ + ++ + ++ Y KCG+
Sbjct: 307 HLNGNKPSEFT-FVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGS 365
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L DAR FD + E D W +M+ Y QNG L L+ M + +++T A+VLR+
Sbjct: 366 LVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRA 425
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L KQ+H +K GF V + S+L Y KC + D +F + +++ ++W
Sbjct: 426 CSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTW 485
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
N ++ G G +A+ +F ++ +P TF N L ACS +
Sbjct: 486 NAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHM 530
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 188/647 (29%), Positives = 335/647 (51%), Gaps = 48/647 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVF-----LLNRAIECYGKCGNLDDARGLFDEMPER 106
C++ ++ EAR++ ++++ P + L N + YGKCG++++AR +FD + R
Sbjct: 154 CSAVGSLREAREIHASII---EAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNR 210
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
D SW +M+ +Y NGF L+L+ M+ G+ + IT+ + L + + ++ K +H
Sbjct: 211 DAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIH 267
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
IV + + S+L++ Y +C ++ AR+ F+ IQNK+ V W ++ Y+ + +
Sbjct: 268 ARIVSSNMESDFV-GSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYR 326
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA+ ++ +M E + T+ AL AC+ L + EG IH + + F+ VV +L
Sbjct: 327 EALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALL 385
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE-RNVISWN 345
MY KCG L DA AR +FN + + RNV W
Sbjct: 386 TMYAKCGEL-DA------------------------------ARAVFNRVRQKRNVYCWT 414
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AM++ Y ++ +EAL+ M ++ T +L C+ +++ G ++HG + +
Sbjct: 415 AMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENS 474
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ +SN+ V NAL+ MY KCG+L A+ F + S R+D VSWNA++ YA+ G EA+
Sbjct: 475 ELASNVAVQNALVTMYAKCGSLELAKSAF-EASGRKDLVSWNAMIGAYAQHGLGREALDL 533
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYEINVVCRGALVEVYT 523
+ M + P + T + L+ACA SL+ G++IH V++N + +++ + ALV +Y
Sbjct: 534 YQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYG 593
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
+C LE A +F++ DV+ +M + + L+++ M GI+P+ ITF
Sbjct: 594 RCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTS 653
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
IL+ C H G + ++ F M+ ++ ++P EH+ CM+ L R G +++ E V MP+
Sbjct: 654 ILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQ 713
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + C+ + A + AARR+ EL+P + + ++ F
Sbjct: 714 PDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIF 760
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 297/592 (50%), Gaps = 40/592 (6%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
LY L Q C ++ E + + +L+ FL N I+ YG CG + AR F
Sbjct: 44 LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNF 103
Query: 104 PE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +N ML AY +NG R LEL+ M G ++ITY VL S + L +
Sbjct: 104 ASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREA 163
Query: 163 KQLHGLIVK--RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+++H I++ + N+ L+++LV+ YGKC + +AR++FD I+N++AVSW ++ Y
Sbjct: 164 REIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYA 223
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G EA+ ++ +M + I+P + TF +AL AC+ L +G IH I+ + E D
Sbjct: 224 NNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKL---VDGKAIHARIVSSNME-SDF 279
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L MY +CG + AR ++ ++++ WTS+++ Y + REA +L+ M
Sbjct: 280 VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEG 339
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V D VT L CA L +K GK +H
Sbjct: 340 V-------------------------------HADGVTYVTALGACASLGALKEGKAIHS 368
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + S + V ALL MY KCG L +AR F ++ Q+R+ W A+++ YA+ G ++
Sbjct: 369 RVFECGFQS-LVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQ 427
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ + +M E TRP+++TF +LAAC++ LE G +IH V + NV + ALV
Sbjct: 428 EALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALV 487
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y KC LE A F+ S D++ N+MI + + GREAL+++ M +G+ PD +
Sbjct: 488 TMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEV 547
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
T L AC G+++L + + L ++ +Y R G ++
Sbjct: 548 TIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLE 599
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 208/458 (45%), Gaps = 44/458 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI-ECYGKCGNLDDARGLFDEM 103
Y CAS A+ E + + S + F +++ A+ Y KCG LD AR +F+ +
Sbjct: 347 YVTALGACASLGALKEGKAIHSRV--FECGFQSLVVHTALLTMYAKCGELDAARAVFNRV 404
Query: 104 PE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ R+ W AM+ AY Q G LEL+ M G N+ T++NVL + + +L
Sbjct: 405 RQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAG 464
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++HG + NV ++++LV Y KC + A+ F+ K+ VSWN ++ Y
Sbjct: 465 MKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQH 524
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVV 281
G G+EA+ ++ M + + P T A++L AC+ S G +IH ++K F +V
Sbjct: 525 GLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMV 584
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP---- 337
+L MY +CGRLE AR + + +R+++SWT++ S YA G + +L+ EM
Sbjct: 585 QTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGI 644
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
N I++ ++L G + + L ++ FL ++ ++ + +
Sbjct: 645 RPNEITFTSILVGCSHAGLLARGVE-CFLEMQSEHEVVPIREHFL--------------- 688
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
++D+ + G LR A M + D V+W VL
Sbjct: 689 ------------------CMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHS 730
Query: 458 QSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ 495
++ A + ++ E P + +LL++ + L Q
Sbjct: 731 DADTAKRAARRVK-ELDPENTSLYSLLSSIFTAAGLPQ 767
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 175/342 (51%), Gaps = 17/342 (4%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ ++++ C+SS + K+ ++ V + N + Y KCG+L+ A+
Sbjct: 443 PNEYT-FSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKS 501
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
F+ +D SWNAM+GAY Q+G L+L+ M GV +++T A+ L + A
Sbjct: 502 AFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGS 561
Query: 159 LGVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + +++H ++K + F +++++++LV+ YG+C + AR MF+D+ ++ +SW +
Sbjct: 562 LQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTS 621
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+ + + ++ +M+ IRP TF + L CS + G+ GV ++ +
Sbjct: 622 AYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCS-----HAGLLARGVECFLEMQS 676
Query: 278 DDVVLG------SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG---YAISGRIR 327
+ V+ + ++ + GRL DA L++ P + + ++W +++ ++ + +
Sbjct: 677 EHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAK 736
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
A E+ N ++ + + +T + L +EAL+ M++
Sbjct: 737 RAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKE 778
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
++ LL C + SL +GK +H ++R + N L+++Y C + A F+ +
Sbjct: 45 YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104
Query: 540 SLDVIIC-NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
S+ + C N M+ + N ALE++ M +EG +PD IT+ +L +C G+++ A
Sbjct: 105 SIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164
Query: 599 QFFDSMRCKYGII-PQLEHYECMIKLYCRYGYMKE 632
+ S+ II L ++ +Y + G ++E
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEE 199
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 187/600 (31%), Positives = 313/600 (52%), Gaps = 20/600 (3%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ GF L+L+ M G + T+ VL++ E +H ++
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKE 227
GF NV + + LV YG+C +AR++FD+++ + + VSWN IV Y+ G+
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 228 AVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A+ MF +M + IRP + N L AC+ + + G Q+HG ++ D V ++
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVI 342
+MY KCG +E+A + ++ ++++SW ++V+GY+ GR +A LF ++ E NV+
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF- 401
+W+A++AGY + L EALD M + + VTL +L+ CA + GKE H
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412
Query: 402 ------IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYA 454
+ ND ++ V NAL+DMY KC + ++AR F + + R V+W ++ G A
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472
Query: 455 RRGQSEEAMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ G++ EA+ FS+M P+ FT L ACA + +L G+QIH +V+RN +E
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532
Query: 512 VV-CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ L+++Y+K ++ A VF + + S++ G+ + RG EAL++F M+
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
K + PD +TF +L AC H G V + +F+ M +G++P EHY CM+ L R G +
Sbjct: 593 KVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
E + + MP PT + + CR LGE+AA +L EL + + +N +
Sbjct: 653 DEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 712
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 242/498 (48%), Gaps = 89/498 (17%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ AS A+V A E N VF+ N + YG+CG ++AR +FDEM ER
Sbjct: 161 FRCGASVHAVVFASGFEWN---------VFVGNGLVSMYGRCGAWENARQVFDEMRERGV 211
Query: 109 G---SWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQ 164
G SWN+++ AY Q G R +++F M G+ + ++ NVL + A KQ
Sbjct: 212 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 271
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++ G +V + +++VD Y KC +M +A ++F+ ++ K+ VSWN +V Y G
Sbjct: 272 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 331
Query: 225 GKEAVVMFFKMLREDI----------------RPLNF-------------------TFAN 249
+A+ +F K+ E I R L F T +
Sbjct: 332 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVS 391
Query: 250 ALFACSFLSSPYEGMQIHGVIIKI------DFEGDDV-VLGSLTEMYVKCGRLEDARGLL 302
L C+ + G + H IK + GDD+ V+ +L +MY KC + AR +
Sbjct: 392 LLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 451
Query: 303 D--QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
D P +R++++WT ++ G A G EA ELF++M + +
Sbjct: 452 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPD-------------------- 491
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLD 419
+FV + T+ L CA L ++ G+++H ++ RN + S+ +FV+N L+D
Sbjct: 492 -NFVM--------PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
MY K G++ +AR+ F M Q R+ VSW +++TGY G+ EEA+ F EMQ P
Sbjct: 543 MYSKSGDVDAARVVFDNMHQ-RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGV 601
Query: 479 TFETLLAACANISSLEQG 496
TF +L AC++ ++QG
Sbjct: 602 TFVVVLYACSHSGMVDQG 619
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/600 (31%), Positives = 310/600 (51%), Gaps = 40/600 (6%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SS 153
A LF + D WN L +Y Q G ++ F DM S V + +TY +L +S
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
LELG KQ+HG +V+ G+ V + +S ++ Y K + ARRMF ++ + +SWN
Sbjct: 310 LNHLELG--KQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN 367
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-EGMQIHGVIIK 272
++ +G + ++ +F +LR + P FT + L ACS L Y G Q+H +K
Sbjct: 368 TVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK 427
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
D V +L ++Y K G++E EA L
Sbjct: 428 AGIVLDSFVSTALIDVYSKGGKME-------------------------------EAELL 456
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+ ++ SWNAM+ G+T S ++EAL LM + + DQ+T L +
Sbjct: 457 FHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRL 516
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GK++H + + + ++FV + +LDMY KCG ++SAR F Q+ D V+W V++G
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP-DDVAWTTVISG 575
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEI 510
G+ E+A+ ++ +M+ +P ++TF TL+ AC+ +++LEQGKQIH +++ NC
Sbjct: 576 CVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNC-AF 634
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ +LV++Y KC +E A +F+ ++ V + N+MI+G + EAL F MK
Sbjct: 635 DPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK 694
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
G+ PD +TF G+L AC H G A + FDSM+ YG+ P++EHY C++ R G++
Sbjct: 695 SRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHI 754
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+E E V+ MPF + M R + + CR G GE A +L ++P + + +N +
Sbjct: 755 QEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIY 814
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 233/458 (50%), Gaps = 34/458 (7%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+KS P Y + + AS + +++ +V F V + N AI Y K G++
Sbjct: 289 IKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSV 348
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS- 152
+ AR +F +M E D SWN ++ ++G +L LF+D+ SG+ +Q T +VLR+
Sbjct: 349 NYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC 408
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
S+ E V +Q+H +K G + + ++L+D Y K M +A +F + + SW
Sbjct: 409 SSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASW 468
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ + V+ N +EA+ +F M + TFANA A L +G QIH V+IK
Sbjct: 469 NAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIK 528
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ F D V+ + +MY+KCG ++ AR + +Q + ++WT+++SG +G +A
Sbjct: 529 MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFT 588
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
+++M LAG D+ T ++ C+ L+ +
Sbjct: 589 YHQM----------RLAGVQP---------------------DEYTFATLVKACSLLTAL 617
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GK++H I + + + + FV +L+DMY KCGN+ A F +M+ R + WNA++ G
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVAL-WNAMIVG 676
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
A+ G +EEA+ F+EM+ P + TF +L+AC++
Sbjct: 677 LAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSH 714
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 163/622 (26%), Positives = 277/622 (44%), Gaps = 89/622 (14%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE--RDGGSWNAML 115
++ ++ + +VT P ++ N I Y KCG+L AR LFD P+ RD ++NA+L
Sbjct: 29 LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88
Query: 116 GAYTQNG------FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
AY G +F + S + + T + + + S+ L G
Sbjct: 89 AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA 148
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK G +V + +LV+ Y K + +AR +FD + ++ V WNV+++ Y+ G G E +
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVL 208
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD-DVVLGSLTEM 288
+F R +RP + L GV K FE + + V T++
Sbjct: 209 GLFSAFHRSGLRPDCVSVRTILM---------------GVGKKTVFERELEQVRAYATKL 253
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
+V C D+ ++ W +S Y +G EA + F +M + V
Sbjct: 254 FV-C------------DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRV------- 293
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
D +T +IL+V A L+ +++GK++HG + R +
Sbjct: 294 ------------------------PCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWD 329
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ V+N+ ++MY K G++ AR F QM + D +SWN V++G AR G E ++ F +
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMKE-VDLISWNTVISGCARSGLEECSLRLFID 388
Query: 469 -MQWETRPSKFTFETLLAACANISSLEQ----GKQIHCFVIRNCYEINVVCRGALVEVYT 523
++ P +FT ++L AC SSLE+ G+Q+H ++ ++ AL++VY+
Sbjct: 389 LLRSGLLPDQFTITSVLRAC---SSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYS 445
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K +E A +F D+ N+M+ GF ++ REAL +F LM + G K D ITF
Sbjct: 446 KGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFAN 505
Query: 584 ILLAC-----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
A + +G A+ MR Y + ++ +Y + G MK N
Sbjct: 506 AAKAAGCLVRLQQGKQIHAVVI--KMRFHYDLFV----ISGILDMYLKCGEMKSARKVFN 559
Query: 639 RMPFNPTVPMLRKIFDKCRKNG 660
++P +P + C +NG
Sbjct: 560 QIP-SPDDVAWTTVISGCVENG 580
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 239/543 (44%), Gaps = 61/543 (11%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF+LC + + L+ V VF+ + Y K + +AR LFD MP RD
Sbjct: 128 LFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRD 187
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN M+ AY + G L LF + SG+ + ++ +L +GV K+
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL--------MGVGKKT-- 237
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+ +R E V AY + + D DD + WN + YL AG G E
Sbjct: 238 -VFER--------ELEQVRAYATKLFVCD-----DD---SDVTVWNKTLSSYLQAGEGWE 280
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
AV F M++ + + T+ L + L+ G QIHG +++ ++ V S
Sbjct: 281 AVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAIN 340
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MYVK G + AR + Q E ++ISW +++SG A SG + LF ++ ++
Sbjct: 341 MYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP---- 396
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK-MGKEVHGFIHRND 406
DQ T+ +L C+ L E +G++VH +
Sbjct: 397 ---------------------------DQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ FVS AL+D+Y K G + A + F+ D SWNA++ G+ EA+ F
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDG-FDLASWNAMMHGFTVSDNYREALRLF 488
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
S M + + TF A + L+QGKQIH VI+ + ++ ++++Y KC
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC 548
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
++ A +VF + S D + ++I G N +AL + M+ G++PD TF ++
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLV 608
Query: 586 LAC 588
AC
Sbjct: 609 KAC 611
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 161/297 (54%), Gaps = 4/297 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y K G +++A LF D SWNAM+ +T + L LF M+
Sbjct: 435 FVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G A+QIT+AN +++ + L KQ+H +++K F ++ + S ++D Y KC M A
Sbjct: 495 GEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSA 554
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++F+ I + + V+W ++ + G ++A+ + +M ++P +TFA + ACS L
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLL 614
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G QIH I+K++ D V+ SL +MY KCG +EDA GL + + R++ W +++
Sbjct: 615 TALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMI 674
Query: 318 SGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
G A G EA FNEM R V +++ +L+ + S L +A M+KT
Sbjct: 675 VGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKT 731
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
IL S++ +GK H I + + + +V+N L+ MY KCG+L SAR F Q
Sbjct: 19 ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78
Query: 441 RDKVSWNAVLTGYARRGQ------SEEAMTSFSEMQWETR-PSKFTFETLLAACANISSL 493
RD V++NA+L YA G+ + EA F ++ ++ T L C S
Sbjct: 79 RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ + + ++ + +V GALV +Y K + A +F DV++ N M+ +
Sbjct: 139 SASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAY 198
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
G E L +F + G++PD ++ IL+
Sbjct: 199 VEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMG 232
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 164/436 (37%), Gaps = 75/436 (17%)
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G + H VI+ D V +L MY KCG L
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSL--------------------------- 64
Query: 323 SGRIREARELFNEMPE--RNVISWNAMLAGYTRS------LLWKEALDFVFLMRKTTKDI 374
AR+LF+ P+ R+++++NA+LA Y + EA L+R++
Sbjct: 65 ----FSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLT 120
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ TL + +C + + G+ + ++FV+ AL+++Y K +R AR+ F
Sbjct: 121 TRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLF 180
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M RD V WN ++ Y G +E + FS RP + T+L +
Sbjct: 181 DRMPV-RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVF 239
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E R ++ YA ++F DV + N + +
Sbjct: 240 E----------RELEQVRA-----------------YATKLFVCDDDSDVTVWNKTLSSY 272
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
G EA++ F M K + D +T+ IL +++L Q ++ ++G
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV-VRFGWDQF 331
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+ I +Y + G + +M + + C ++G L E + R
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISW-NTVISGCARSG---LEECSLRLFI 387
Query: 674 EL--NPWAPFQFKITT 687
+L + P QF IT+
Sbjct: 388 DLLRSGLLPDQFTITS 403
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 292/535 (54%), Gaps = 11/535 (2%)
Query: 163 KQLHGLIVKRG-----FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
KQ+H I+K G F + ++E + +G ++ A +F+ I+ N WN ++R
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---LSYALLLFESIEQPNQFIWNTMIR 105
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
++ + A+ + +ML + P ++TF L +C+ + + EG QIHG ++K+ E
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL MY + G L A + + R+ +S+T++++GY + G + +AR LF E+P
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R+ +SWNAM+AGY +S ++EAL F M++ ++ T+ +L+ CA +++G
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNW 285
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V +I + SN+ + NAL+DMY KCG+L AR F + + +D +SWN ++ GY+
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE-KDIISWNVMIGGYSHMN 344
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCR 515
+EA+ F +MQ P+ TF ++L ACA + +L+ GK IH ++ + + N
Sbjct: 345 SYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW 404
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+++Y KC +E A +VF + N+MI G + ALE+F M+ EG +
Sbjct: 405 TSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFE 464
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD ITF G+L AC H G V+L Q F SM Y I P+L+HY CMI L R G E E
Sbjct: 465 PDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEA 524
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ M P + + CR +G LGE+AA+ L EL P P + + +N +
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIY 579
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 158/622 (25%), Positives = 264/622 (42%), Gaps = 110/622 (17%)
Query: 13 LSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFY 72
S S P P+ T SD P L ++ K+ +++ S ++
Sbjct: 6 FSPSLVMPPPTLHFQPT------SDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTG 59
Query: 73 PTPPVFLLNRAIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
F L++ IE GNL A LF+ + + + WN M+ + + P ++
Sbjct: 60 LHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDF 119
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
++ M GV N T+ +L+S A+ KQ+HG ++K G + + +SL++ Y +
Sbjct: 120 YVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQ 179
Query: 191 -----------------------CMV--------MTDARRMFDDIQNKNAVSWNVIVRRY 219
++ + DARR+F++I ++AVSWN ++ Y
Sbjct: 180 NGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGY 239
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+G +EA+ F +M R ++ P T L AC+ S G + I +
Sbjct: 240 AQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNL 299
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
++ +L +MY KCG L+ AR L + E++IISW ++ GY+ +EA LF +M +
Sbjct: 300 RLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQS 359
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
NV + + VT IL CA L + +GK +H
Sbjct: 360 NV-------------------------------EPNDVTFVSILPACAYLGALDLGKWIH 388
Query: 400 GFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+I + +N + +L+DMY KCGN+ +A+ F M + + SWNA+++G A G
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM-KPKSLGSWNAMISGLAMHGH 447
Query: 459 SEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+ A+ F +M+ E P TF +L+AC++ +E G+Q C +
Sbjct: 448 ANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQ---------------CFSS 492
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL--EVFGLMKKEGIK 575
+VE Y L++ G + GR L E LMK +K
Sbjct: 493 MVEDYDISPKLQH--------------------YGCMIDLLGRAGLFDEAEALMKNMEMK 532
Query: 576 PDHITFHGILLACIHEGNVKLA 597
PD + +L AC GNV+L
Sbjct: 533 PDGAIWGSLLGACRVHGNVELG 554
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+N I+ Y KCG+LD AR LF+ + E+D SWN M+G Y+ L LF M S
Sbjct: 301 LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSN 360
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG--NVILESSLVDAYGKCMVMTD 196
V N +T+ ++L + A L + K +H I K+ F G N L +SL+D Y KC +
Sbjct: 361 VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK-FLGLTNTSLWTSLIDMYAKCGNIEA 419
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+++F ++ K+ SWN ++ + G+ A+ +F +M E P + TF L ACS
Sbjct: 420 AKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSH 479
Query: 257 LSSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWT 314
G Q +++ D G + ++ + G ++A L+ + + + W
Sbjct: 480 AGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWG 539
Query: 315 SIVSGYAISGRIR----EARELFNEMPE 338
S++ + G + A+ LF PE
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPE 567
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 292/535 (54%), Gaps = 11/535 (2%)
Query: 163 KQLHGLIVKRG-----FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
KQ+H I+K G F + ++E + +G ++ A +F+ I+ N WN ++R
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN---LSYALLLFESIEQPNQFIWNTMIR 105
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
++ + A+ + +ML + P ++TF L +C+ + + EG QIHG ++K+ E
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL MY + G L A + + R+ +S+T++++GY + G + +AR LF E+P
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R+ +SWNAM+AGY +S ++EAL F M++ ++ T+ +L+ CA +++G
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNW 285
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V +I + SN+ + NAL+DMY KCG+L AR F + + +D +SWN ++ GY+
Sbjct: 286 VRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE-KDIISWNVMIGGYSHMN 344
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCR 515
+EA+ F +MQ P+ TF ++L ACA + +L+ GK IH ++ + + N
Sbjct: 345 SYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW 404
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+++Y KC +E A +VF + N+MI G + ALE+F M+ EG +
Sbjct: 405 TSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFE 464
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD ITF G+L AC H G V+L Q F SM Y I P+L+HY CMI L R G E E
Sbjct: 465 PDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEA 524
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ M P + + CR +G LGE+AA+ L EL P P + + +N +
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIY 579
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 158/624 (25%), Positives = 266/624 (42%), Gaps = 114/624 (18%)
Query: 13 LSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFY 72
S S P P+ T SD P L ++ K+ +++ S ++
Sbjct: 6 FSPSLVMPPPTLHFQPT------SDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTG 59
Query: 73 PTPPVFLLNRAIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
F L++ IE GNL A LF+ + + + WN M+ + + P ++
Sbjct: 60 LHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDF 119
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
++ M GV N T+ +L+S A+ KQ+HG ++K G + + +SL++ Y +
Sbjct: 120 YVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQ 179
Query: 191 ---------------------------------CMVMTDARRMFDDIQNKNAVSWNVIVR 217
C + DARR+F++I ++AVSWN ++
Sbjct: 180 NGELGYAELVFSKSSLRDAVSFTALITGYTLRGC--LDDARRLFEEIPVRDAVSWNAMIA 237
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y +G +EA+ F +M R ++ P T L AC+ S G + I
Sbjct: 238 GYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGS 297
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ ++ +L +MY KCG L+ AR L + E++IISW ++ GY+ +EA LF +M
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ NV + + VT IL CA L + +GK
Sbjct: 358 QSNV-------------------------------EPNDVTFVSILPACAYLGALDLGKW 386
Query: 398 VHGFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H +I + +N + +L+DMY KCGN+ +A+ F M + + SWNA+++G A
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM-KPKSLGSWNAMISGLAMH 445
Query: 457 GQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G + A+ F +M+ E P TF +L+AC++ +E G+Q C
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQ---------------CF 490
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL--EVFGLMKKEG 573
++VE Y + + ++ +D++ GR L E LMK
Sbjct: 491 SSMVEDY------DISPKLQHYGCMIDLL--------------GRAGLFDEAEALMKNME 530
Query: 574 IKPDHITFHGILLACIHEGNVKLA 597
+KPD + +L AC GNV+L
Sbjct: 531 MKPDGAIWGSLLGACRVHGNVELG 554
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+N I+ Y KCG+LD AR LF+ + E+D SWN M+G Y+ L LF M S
Sbjct: 301 LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSN 360
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG--NVILESSLVDAYGKCMVMTD 196
V N +T+ ++L + A L + K +H I K+ F G N L +SL+D Y KC +
Sbjct: 361 VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK-FLGLTNTSLWTSLIDMYAKCGNIEA 419
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+++F ++ K+ SWN ++ + G+ A+ +F +M E P + TF L ACS
Sbjct: 420 AKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSH 479
Query: 257 LSSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWT 314
G Q +++ D G + ++ + G ++A L+ + + + W
Sbjct: 480 AGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWG 539
Query: 315 SIVSGYAISGRIR----EARELFNEMPE 338
S++ + G + A+ LF PE
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPE 567
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 324/641 (50%), Gaps = 37/641 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + S + L Q ++++ + + L + ++ + V++ N + Y KC L +A+
Sbjct: 4 PSNRSFFTALLQY-THNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKF 61
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRT--LELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ + +D SWN ++ Y+Q+G G + +ELF M + N T+A V +++
Sbjct: 62 VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 121
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
++ + H + +K C +V + SSL++ Y K + +AR++FD + +N+VSW ++
Sbjct: 122 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 181
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y EA+ +F M RE+ F F + L A + G QIH + +K
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L MY KCG L+D A + F
Sbjct: 242 SIVSVGNALVTMYAKCGSLDD-------------------------------ALQTFETS 270
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++N I+W+AM+ GY +S +AL M + + T ++N C+ L GK
Sbjct: 271 SDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGK 330
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+VH ++ + + S I+V AL+DMY KC ++ AR F + Q D V W +++ GY +
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL-QEPDIVLWTSMIGGYVQN 389
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G++E+A++ + M+ E P++ T ++L AC+++++LEQGKQIH ++ + + V
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL +Y KC CL+ VF+ + DVI N+MI G N G+EALE+F M+ EG K
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTK 509
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD++TF IL AC H G V+ +F M ++G+ P++EHY CM+ + R G +KE +
Sbjct: 510 PDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIE 569
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
F + + + R I CR LG +A +L EL
Sbjct: 570 FTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELG 610
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K L S HL P ++ + + C+ A E +++ L+ ++++
Sbjct: 293 KALKLFSSMHLSGIRPSEFT-FVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTAL 351
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC ++ DAR FD + E D W +M+G Y QNG L L+ M G+ N+
Sbjct: 352 VDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNE 411
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T A+VL++ + L KQ+H VK GF V + S+L Y KC + D +F
Sbjct: 412 LTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRR 471
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+ ++ +SWN ++ G GKEA+ +F +M E +P TF N L ACS +
Sbjct: 472 MPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHM 525
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
T PS +F T L + SL++GK +H +I++ V +LV +Y KC L A
Sbjct: 2 TLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAK 60
Query: 533 RVFKESSSLDVIICNSMILGFC-HNERG-REALEVFGLMKKEGIKPDHITFHGILLAC-- 588
VF+ + DV+ N +I G+ H G +E+F M+ E P+ TF G+ A
Sbjct: 61 FVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120
Query: 589 -IHEGNVKLALQFFDSM-RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ +LA M C+ + ++ +YC+ G E + MP +V
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGS-----SLMNMYCKAGLTPEARKVFDTMPERNSV 175
Query: 647 PMLRKIFDKCRKNGYAT 663
I +GYA+
Sbjct: 176 SWATMI------SGYAS 186
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 318/620 (51%), Gaps = 6/620 (0%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL N I Y K G + DA +F + + S+ A++ ++++ + +ELF M
Sbjct: 130 IFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLD 189
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG+ N+ T+ +L + ++ + Q+HG++VK G V + ++L+ Y KC +
Sbjct: 190 SGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDL 249
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACS 255
R+F+++ ++ SWN ++ + EA F M L + ++ +F+ + L AC+
Sbjct: 250 VLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACA 309
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
P +G Q+H + +K+ E V SL Y KCG D L + R++I+WT
Sbjct: 310 GSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTG 369
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ Y G + A E+FN+MP+RN IS+NA+LAG +R+ AL+ M + +I
Sbjct: 370 MITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEIS 429
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL I+ C L K+ +++ GF+ + SN + AL+DMY +CG + A FY
Sbjct: 430 DCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFY 489
Query: 436 QMSQRRDKVSW-NAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISS 492
Q S D + +++ GYAR G+ EA++ F Q E + ++L+ C +I
Sbjct: 490 QRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGF 549
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E G Q+HC +++ A V +Y+KC ++ A+RVF + D++ N ++ G
Sbjct: 550 HEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAG 609
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH-EGN-VKLALQFFDSMRCKYGI 610
+ +G +AL ++ M+K GIKPD ITF I+ A H E N V F SM ++ I
Sbjct: 610 HVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNI 669
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P LEHY I + R+G ++E E + MP P V + R + + CR N L + AAR
Sbjct: 670 KPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAAR 729
Query: 671 RLNELNPWAPFQFKITTNRF 690
+ + P P + + +N +
Sbjct: 730 NILAVEPKDPLSYILKSNLY 749
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 229/536 (42%), Gaps = 73/536 (13%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++LR S + +++ +H +K ++ L ++L+ AY K ++ DA ++F +
Sbjct: 102 DLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCP 159
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N VS+ ++ + + EAV +FF ML I P +TF L AC G Q+H
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
G+++K+ + +L +Y KCG L+ L ++ ER+I SW +++S +
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
EA + F M + K K +D +L +L CA
Sbjct: 280 EAFDYFRGMQ-----------------------------LCKGLK-VDHFSLSTLLTACA 309
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN------------LRSARIW-- 433
G + G+++H + S++ VS++L+ Y KCG+ +R W
Sbjct: 310 GSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTG 369
Query: 434 ----------------FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+ +R+ +S+NAVL G +R A+ F EM E S
Sbjct: 370 MITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEIS 429
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T +++ AC + S + +QI FV++ N ALV++YT+C +E A ++F
Sbjct: 430 DCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFY 489
Query: 537 ESSSLD--VIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLACIHEGN 593
+ S + + SMI G+ N + EA+ +F + EG I D + IL C G
Sbjct: 490 QRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGF 549
Query: 594 VKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ +Q M C K G+I + + +Y + M + N M V
Sbjct: 550 HEMGMQ----MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIV 601
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 179/388 (46%), Gaps = 36/388 (9%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E +I +++S Y G +R+A ++F+ + NV+S+ A+++G+++S EA++ F
Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + + ++ T IL C + ++G +VHG + + S +F+ NAL+ +Y KCG
Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGF 246
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLL 484
L F +M + RD SWN V++ + + +EA F MQ + F+ TLL
Sbjct: 247 LDLVLRLFEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLL 305
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC----------------- 527
ACA +G+Q+H ++ E ++ +L+ YTKC
Sbjct: 306 TACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVI 365
Query: 528 --------------LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L+ A+ VF + + I N+++ G N+ G ALE+F M +EG
Sbjct: 366 TWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEG 425
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
++ T I+ AC + K++ Q K+GI+ ++ +Y R G M++
Sbjct: 426 VEISDCTLTSIITACGLLKSFKVSQQ-IQGFVMKFGILSNSCIETALVDMYTRCGRMEDA 484
Query: 634 ED-FVNRMPFNPTVPMLRKIFDKCRKNG 660
E F R N ML + +NG
Sbjct: 485 EKIFYQRSLENDYTAMLTSMICGYARNG 512
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 208/457 (45%), Gaps = 22/457 (4%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+S VS SL + C S+ + ++L P V I Y + G L
Sbjct: 329 LESHLSVSSSLIG-FYTKCGSANDV-------TDLFETMPIRDVITWTGMITSYMEFGML 380
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D A +F++MP+R+ S+NA+L ++N R LELF++M GV + T +++ +
Sbjct: 381 DSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITAC 440
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF--DDIQNKNAVS 211
VS+Q+ G ++K G N +E++LVD Y +C M DA ++F ++N
Sbjct: 441 GLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAM 500
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA-CSFLSSPYEGMQIHGVI 270
++ Y G EA+ +F E ++ + ++ + C + GMQ+H
Sbjct: 501 LTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHA 560
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K + V + MY KC ++DA + + + ++I+SW +V+G+ + + +A
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620
Query: 331 ELFNEMPERNV----ISWNAMLAGYTRSLL-WKEALDFVFLMRKTTKDIDQVTLGLILNV 385
++ +M + + I++ +++ Y + L ++ +F+ +T +I + TL +
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNI-KPTLEHYASF 679
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM--SQRRDK 443
+ L + +E I +++V ALL+ R N R ++ + + +D
Sbjct: 680 ISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDP 739
Query: 444 VSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSK 477
+S+ Y+ G+ SE+ E + PS+
Sbjct: 740 LSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQ 776
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/651 (28%), Positives = 337/651 (51%), Gaps = 10/651 (1%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L +L I AR L ++++ L N I Y K G + DA +F M
Sbjct: 109 NLLRLSVKYTDIDLARALHASILKL--GEDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTP 166
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
D S++A++ ++++ ++LF M SG+ N+ ++ +L + LEL + Q+H
Sbjct: 167 DVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVH 226
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
L +K G+ V + ++L+ YGKC + A +FD++ ++ SWN ++ LV G
Sbjct: 227 ALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISS-LVKGLSY 285
Query: 227 EAVVMFFKMLRED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
E + F++L ++ + FT + L AC+ + +G +IH I+I E + V +
Sbjct: 286 EKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNA 345
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+ Y +CG L L ++ R+II+WT +++ Y G + A ++FN+MPE+N +S+
Sbjct: 346 IIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSY 405
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA+L G+ ++ +AL+ M + ++ TL ++N C L ++++ +++HGFI +
Sbjct: 406 NALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIK 465
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYARRGQSEEAM 463
+ SN + AL+DM KCG + A F +S + + +++ GYAR G EEA+
Sbjct: 466 FGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAI 525
Query: 464 TSFSEMQWETRP--SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F Q E + F ++L C + E GKQIHC ++ + + +++ +
Sbjct: 526 CLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISM 585
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y+KC ++ AI+ F DV+ N +I G + +G EAL ++ M+K GIKPD ITF
Sbjct: 586 YSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITF 645
Query: 582 HGILLACIHEGNVKL--ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
I+ A + L F SM+ + + P EHY ++ + +G ++E E+ +N+
Sbjct: 646 VLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINK 705
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MPF+P V + R + D CR + ++G+ A+ + + P P + + +N +
Sbjct: 706 MPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLY 756
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 213/484 (44%), Gaps = 67/484 (13%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP YS A + C S + ++ + + + VF+ N I YGKCG LD A
Sbjct: 200 EPNEYSFVA-ILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAI 258
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEE 156
LFDEMP+RD SWN M+ + + + LELF +N + G A+Q T + +L + A
Sbjct: 259 HLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARC 318
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC------------MVMTD-------- 196
+++H ++ G N+ + ++++ Y +C M + D
Sbjct: 319 HARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMI 378
Query: 197 -----------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
A MF+ + KN+VS+N ++ + G +A+ +F +M++E +F
Sbjct: 379 TAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDF 438
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-- 303
T + AC L QIHG IIK F + + +L +M KCGR++DA +
Sbjct: 439 TLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSL 498
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
D N I TS++ GYA +G EA LF
Sbjct: 499 STDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEG----------------------- 535
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
T +D+V IL VC L ++GK++H + + + + V N+++ MY K
Sbjct: 536 -------TMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSK 588
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
C N+ A F M D VSWN ++ G Q +EA+ +S M+ +P TF
Sbjct: 589 CYNIDDAIKAFNTMPG-HDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVL 647
Query: 483 LLAA 486
+++A
Sbjct: 648 IVSA 651
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 319/616 (51%), Gaps = 17/616 (2%)
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-----LDMNHSGVSAN 142
C L+ A+ F + D +++L + + G L+ F + ++ S S +
Sbjct: 41 ASCNALESAQETFTSV---DASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQD 97
Query: 143 QITY--ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
I + +++L S + L +QLHG I+ GF + IL LV Y ++ DA +
Sbjct: 98 LIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI 157
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
++ + WN+++ Y+ G ++A+ + +M+++ IRP NFT+ + L AC
Sbjct: 158 TENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDL 217
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G ++H I + +V +L MY KCG++ AR L D+ ER+ +SW S++S Y
Sbjct: 218 GFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVY 277
Query: 321 AISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A G EA ELF M E N+I WN + GY R+ +K AL+ + MRK +D
Sbjct: 278 ASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDS 337
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V L + L C+ + + K+GKE+H F R+ + V NAL+ MY +C +L+ A + F Q
Sbjct: 338 VALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLF-Q 396
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+ + + ++WN++++G +SEEA EM + P+ T ++L CA +++L+
Sbjct: 397 LMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQH 456
Query: 496 GKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+ HC++ R ++ +++ ALV++Y + + A RVF D + SMI G+
Sbjct: 457 GKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYG 516
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
G+ AL++F M IKPDHIT +L AC H G V F+ MR YG+ P L
Sbjct: 517 MQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHL 576
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EH+ CM L+ R G + + ++ + MP+ PT M + CR + +GEWAA +L E
Sbjct: 577 EHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLE 636
Query: 675 LNPWAPFQFKITTNRF 690
+ P P + + N +
Sbjct: 637 MKPENPGYYVLIANMY 652
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YGKCG + AR LFD++PERD SWN+M+ Y G ELF M +
Sbjct: 240 NALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIE 299
Query: 141 ANQITYANV--------------------------LRSSAEELELG---------VSKQL 165
N I + + L S A + LG + K++
Sbjct: 300 LNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEI 359
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++ F ++++L+ Y +C + A +F ++ K+ ++WN I+
Sbjct: 360 HSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRS 419
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFEGDDVVLGS 284
+EA + +ML I P T A+ L C+ +++ G + H + + DF+ ++ +
Sbjct: 420 EEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNA 479
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
L +MY + G++ +AR + D ER+ +++TS+++GY + G + A +LF EM
Sbjct: 480 LVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEM 531
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N ++ Y + G + +AR +FD + ERD ++ +M+ Y G L+LF +MN+
Sbjct: 474 LLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNN 533
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR----GFCGNVILESSLVDAYGKCM 192
+ + IT VL + + G+ Q L K G ++ + + D +G+
Sbjct: 534 FQIKPDHITMIAVLSACSHS---GLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAG 590
Query: 193 VMTDARRMFDDIQNK 207
++ A+ + ++ K
Sbjct: 591 LLNKAKEIIRNMPYK 605
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 336/647 (51%), Gaps = 36/647 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H + P +++L ++ + CA+ A+ R + V++ + ++ Y G
Sbjct: 133 HPAAPSPDAHTL-PYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGL 191
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L +AR FD +PERD WN M+ + G + LF +M SG N T A L
Sbjct: 192 LGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSV 251
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A + +L QLH L VK G V + ++L+ Y KC + DA R+F+ + + V+W
Sbjct: 252 CATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTW 311
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ + G EA +F+ M R RP + T + L A + L+ +G ++HG I++
Sbjct: 312 NGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVR 371
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
D ++ +L ++Y KC R++ R A+ L
Sbjct: 372 NCVNMDVFLVSALVDIYFKC---------------RDV----------------RMAQNL 400
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
++ +V+ + M++GY + + +EAL F +L+ + K + VT+ +L CA ++
Sbjct: 401 YDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKP-NAVTIASVLPGCASMAA 459
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ +G+++HG++ RN Y +V +AL+DMY KCG L + F +MSQ+ D+V+WN++++
Sbjct: 460 LPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQK-DEVTWNSMIS 518
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+++ G+ +EA+ F +M E + + T L+ACA++ ++ GK+IH I+ +
Sbjct: 519 SFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKA 578
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ AL+++Y KC LE A+RVF+ + + NS+I + + +E++ + M+
Sbjct: 579 DIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQ 638
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG KPDH+TF ++ AC H G V+ +Q F M KY I P++EH+ CM+ LY R G +
Sbjct: 639 EEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKL 698
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ F+ MPF P + + CR + L + A++ L +L+P
Sbjct: 699 DKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDP 745
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 148/316 (46%), Gaps = 9/316 (2%)
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQP--DERNIISWTSIVSGYAISGRIREARELFNEMP 337
V+ G ++ ++ G AR ++ D ++ T ++ Y ++ R R+A +F+ +P
Sbjct: 38 VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97
Query: 338 ERNVIS---WNAMLAGYTRSLLWKEALDFVFLM--RKTTKDIDQVTLGLILNVCAGLSEI 392
S WN ++ G+T + A+ F M D TL ++ CA L +
Sbjct: 98 RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+G+ VH +++++V +AL+ MY G L +AR F + + RD V WN ++ G
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPE-RDCVLWNVMMDG 216
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ G + A+ F M+ P+ T L+ CA + L G Q+H ++ E
Sbjct: 217 CIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPE 276
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V L+ +Y KC CL+ A R+F+ D++ N MI G N EA +F M++
Sbjct: 277 VAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQR 336
Query: 572 EGIKPDHITFHGILLA 587
G +PD IT +L A
Sbjct: 337 SGARPDSITLVSLLPA 352
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 328/656 (50%), Gaps = 35/656 (5%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
+++P Y L A + + C + A ++ +V V++ I+ Y K +DD
Sbjct: 136 NEKPNEYIL-ASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDD 194
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR LFD + + +W ++ Y++ G +L+LF M V ++ ++VL +
Sbjct: 195 ARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLM 254
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L KQ+H +++ G +V + + +D Y KC + R++FD + +KN VSW +
Sbjct: 255 LKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTV 314
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + ++A+ +F +M R P F + L +C L + +G Q+H IK++
Sbjct: 315 IAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNI 374
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ DD V L +MY KC L DAR ++FN
Sbjct: 375 DNDDFVKNGLIDMYAKCDSLTDAR-------------------------------KVFNL 403
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M +++S+NAM+ GY+R EALD MR + + +L V A L +++
Sbjct: 404 MAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELS 463
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++HG I + S + F +AL+D+Y KC + AR+ F ++ Q +D V W A+ +GY +
Sbjct: 464 NQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEI-QDKDIVVWTAMFSGYTQ 522
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+ ++EE++ + +Q +P++FTF ++ A +NI+SL G+Q H VI+ ++ +
Sbjct: 523 QSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFV 582
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
LV++Y K +E A + F ++ D NSMI + + +AL+VF M EG+
Sbjct: 583 ANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGL 642
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
KP+++TF G+L AC H G + L FDSM ++GI P +EHY CM+ L R G + E +
Sbjct: 643 KPNYVTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPGIEHYVCMVSLLGRAGKLYEAK 701
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+F+ +MP + R + CR +G LG +AA NP + + +N F
Sbjct: 702 EFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIF 757
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 285/574 (49%), Gaps = 36/574 (6%)
Query: 62 RKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
+K+ S +V F + +FL+N + Y K ++ A LFD M ++ +W++M+ YT
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 121 NGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+ L LF+ M N+ A+V+R+ + L + Q+HGL+VK G+ +V
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ +SL+D Y K + DAR +FD +Q K + +W I+ Y G + ++ +F +M
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ P + ++ L AC L G QIH +++ D ++ + Y KC +++ R
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L D+ ++N++SWT++++G + R+A +LF EM + WN G T
Sbjct: 298 KLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMAR---MGWNPDAFGCTS------ 348
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
+LN C L ++ G++VH + + + ++ FV N L+D
Sbjct: 349 ----------------------VLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLID 386
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KC +L AR F M+ D VS+NA++ GY+R+ + EA+ F EM+ + P+
Sbjct: 387 MYAKCDSLTDARKVFNLMAA-IDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLL 445
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
F +LL A++ LE QIH +I+ ++ AL++VY+KC + A VF+E
Sbjct: 446 IFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEI 505
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
D+++ +M G+ E+L+++ ++ +KP+ TF ++ A + +++
Sbjct: 506 QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ 565
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
QF + + K G ++ +Y + G ++E
Sbjct: 566 QFHNQV-IKMGFDDDPFVANTLVDMYAKSGSIEE 598
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 235/469 (50%), Gaps = 44/469 (9%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQ 205
AN+L+S + K++H IV GF ++ L ++L+ AY K ++ A ++FD +
Sbjct: 46 ANLLQSP----HIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMS 101
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGM 264
+KN V+W+ +V Y + EA+++F + +R + +P + A+ + AC+ +
Sbjct: 102 HKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPAL 161
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QIHG+++K + D V SL + Y K ++DAR L D + +WT+I++GY+ G
Sbjct: 162 QIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQG 221
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R + + +LF++M E +V D+ L +L+
Sbjct: 222 RSQVSLKLFDQMKEGHVCP-------------------------------DKYVLSSVLS 250
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C L ++ GK++H ++ R+ ++ + N +D Y KC ++ R F +M ++ V
Sbjct: 251 ACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVD-KNVV 309
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQ---WETRPSKFTFETLLAACANISSLEQGKQIHC 501
SW V+ G + +A+ F EM W P F ++L +C ++ +LE+G+Q+H
Sbjct: 310 SWTTVIAGCMQNSFHRDALDLFVEMARMGW--NPDAFGCTSVLNSCGSLVALEKGRQVHA 367
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+ I+ + + + L+++Y KC L A +VF +++D++ N+MI G+ ++ E
Sbjct: 368 YAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCE 427
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
AL++F M+ P + F +L +++L+ Q + KYG+
Sbjct: 428 ALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ-IHGLIIKYGV 475
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 318/616 (51%), Gaps = 17/616 (2%)
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-----LDMNHSGVSAN 142
C L+ A+ F + D +++L + + G L+ F + ++ S S +
Sbjct: 115 ASCNALESAQETFTSV---DASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQD 171
Query: 143 QITY--ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
I + +++L S + L +QLHG I+ GF + IL LV Y ++ DA +
Sbjct: 172 LIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI 231
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
++ + WN+++ Y+ G ++A+ + +M+++ IRP NFT+ + L AC
Sbjct: 232 TENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDL 291
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G ++H I + +V +L MY KCG++ AR L D+ ER+ +SW S++S Y
Sbjct: 292 GFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVY 351
Query: 321 AISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A G EA ELF M E N+I WN + GY R+ +K AL+ + MRK +D
Sbjct: 352 ASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDS 411
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V L + L C+ + + K+GKE+H F R+ + V N+L+ MY +C +L+ A + F Q
Sbjct: 412 VALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLF-Q 470
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
+ + + +SWN++++G +SEEA EM P+ T ++L CA +++L+
Sbjct: 471 LMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQH 530
Query: 496 GKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+ HC++ R ++ +++ ALV++Y + + A RVF D + SMI G+
Sbjct: 531 GKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYG 590
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
G+ AL++F M IKPDHIT +L AC H G V F+ MR YG+ P L
Sbjct: 591 MQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHL 650
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EH+ CM L+ R G + + ++ + MP+ PT M + CR + +GEWAA +L E
Sbjct: 651 EHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLE 710
Query: 675 LNPWAPFQFKITTNRF 690
+ P P + + N +
Sbjct: 711 MKPENPGYYVLIANMY 726
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 36/292 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YGKCG + AR LFD++PERD SWN+M+ Y G ELF M +
Sbjct: 314 NALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIE 373
Query: 141 ANQITYANV--------------------------LRSSAEELELG---------VSKQL 165
N I + + L S A + LG + K++
Sbjct: 374 LNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEI 433
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++ F +++SL+ Y +C + A +F ++ K+ +SWN I+
Sbjct: 434 HSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRS 493
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLGS 284
+EA + +ML I P T A+ L C+ +++ G + H + + DF+ ++ +
Sbjct: 494 EEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNA 553
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
L +MY + G++ +AR + D ER+ +++TS+++GY + G + A +LF EM
Sbjct: 554 LVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEM 605
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N ++ Y + G + +AR +FD + ERD ++ +M+ Y G L+LF +MN+
Sbjct: 548 LLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNN 607
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR----GFCGNVILESSLVDAYGKCM 192
+ + IT VL + + G+ Q L K G ++ + + D +G+
Sbjct: 608 FQIKPDHITMIAVLSACSHS---GLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAG 664
Query: 193 VMTDARRMFDDIQNK-NAVSWNVIV 216
++ A+ + ++ K W ++
Sbjct: 665 LLNKAKEIIRNMPYKPTPAMWATLI 689
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 282/497 (56%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + EG+QIHG ++K+ +E D V SL MYV+ RLEDA + D+ R+++S+T++
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
V+GYA G I AR +F+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ A I++G++VH +I + + SN+ + NAL+D Y KCG + +A F
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D +SWN ++ GY +EA+ F EM + P+ T ++L ACA++ +++
Sbjct: 256 LSY-KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI 314
Query: 496 GKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + R +L+++Y+KC +E A +VF + N+MI GF
Sbjct: 315 GRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF 374
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++F M+K IKPD ITF G+L AC H G + L F SM Y I P+
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPK 434
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE E+ ++ M P + + C+ +G LGE A+ L
Sbjct: 435 LEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLF 494
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 495 KIEPNNPGSYVLLSNIY 511
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 239/543 (44%), Gaps = 99/543 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P L+L++ M G+ N T+ +L+S A+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA------------------ 197
Q+HG ++K G+ ++ + +SL+ Y + + DA
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 198 -------------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
R MFD+I K+ VSWN ++ Y+ GN KEA+ +F +M++ ++RP
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + A + S G Q+H I F + ++ +L + Y KCG +E A GL
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW ++ GY T L+KEAL
Sbjct: 256 LSYKDVISWNILIGGY-------------------------------THLNLYKEALLLF 284
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + + VT+ IL+ CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFE 481
KCG++ +A F M + +WNA++ G+A G++ A FS M+ E +P TF
Sbjct: 345 KCGDIEAAHQVFNSMLH-KSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFV 403
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC++ L+ G+ I + N +K + L
Sbjct: 404 GLLSACSHAGMLDLGRHIFRSMTHN----------------------------YKITPKL 435
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+ C +LG H+ +EA E+ M E PD + + +L AC GNV+L +F
Sbjct: 436 EHYGCMIDLLG--HSGLFKEAEEMISTMTME---PDGVIWCSLLKACKMHGNVELGEKFA 490
Query: 602 DSM 604
++
Sbjct: 491 QNL 493
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 36/378 (9%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y G ++ AR +FDE+P +D SWNAM+ Y + G LELF +M + V ++ T
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
V+ +SA + + +Q+H I GF N+ + ++L+D Y KC M A +F +
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ +SWN+++ Y KEA+++F +MLR P + T + L AC+ L + G I
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318
Query: 267 HGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
H V I +G + SL +MY KCG +E A + + +++ +W +++ G+A+
Sbjct: 319 H-VYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMH 377
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
GR A ++F+ MRK D +T +L
Sbjct: 378 GRANAAFDIFSR-------------------------------MRKNEIKPDDITFVGLL 406
Query: 384 NVCAGLSEIKMGKEV-HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ C+ + +G+ + H + + ++D+ G + A M+ D
Sbjct: 407 SACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPD 466
Query: 443 KVSWNAVLTGYARRGQSE 460
V W ++L G E
Sbjct: 467 GVIWCSLLKACKMHGNVE 484
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 2/205 (0%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A S +I R++ S + + ++N I+ Y KCG ++ A GLF + +D SWN
Sbjct: 206 ARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWN 265
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
++G YT L LF +M SG S N +T ++L + A + + + +H I KR
Sbjct: 266 ILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKR 325
Query: 173 --GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
G L +SL+D Y KC + A ++F+ + +K+ +WN ++ + + G A
Sbjct: 326 LKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFD 385
Query: 231 MFFKMLREDIRPLNFTFANALFACS 255
+F +M + +I+P + TF L ACS
Sbjct: 386 IFSRMRKNEIKPDDITFVGLLSACS 410
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 324/663 (48%), Gaps = 45/663 (6%)
Query: 69 VTFYPTP------PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
V+ P P P L + Y CG DA + + + WN ++ A+ + G
Sbjct: 69 VSLPPLPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEG 128
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
R + + M +G + T L++ E HGLI GF NV + +
Sbjct: 129 RLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCN 188
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKML--- 236
+LV Y + + DA +FD+I K + +SWN IV ++ N + A+ +F +M
Sbjct: 189 ALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIV 248
Query: 237 -------REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
R DI + N L AC+ L + + +IH I+ D V +L + Y
Sbjct: 249 HEKATNERSDI----ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTY 304
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN----VISWN 345
KCG ++DA + + + ++++SW ++V+GY SG+ A ELF M + N VI+W+
Sbjct: 305 AKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWS 364
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
A++AGY + +EALD M + + VT+ +L+ CA L + G E H + +
Sbjct: 365 AVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKK 424
Query: 406 ------------DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTG 452
++ V NAL+DMY KC + ++AR F + +R R+ V+W ++ G
Sbjct: 425 CLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGG 484
Query: 453 YARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-Y 508
YA+ G S +A+ FSEM + P+ +T +L ACA++SSL GKQIH +V R+ Y
Sbjct: 485 YAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEY 544
Query: 509 EINV-VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E +V L+++Y+KC ++ A VF + + SM+ G+ + RG+EAL++F
Sbjct: 545 ESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFD 604
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M+K G PD I+F +L AC H G V L +FD MR YG+I +HY C+I L R
Sbjct: 605 KMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARS 664
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G + + + MP P+ + + CR + L E+A +L + + + +
Sbjct: 665 GRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLIS 724
Query: 688 NRF 690
N +
Sbjct: 725 NIY 727
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 57/379 (15%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
++ CAS KA+ + +++ S + F+ N I+ Y KCG++ DA +F+ M +
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK 323
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE---------- 156
D SWNAM+ YTQ+G G ELF +M + + IT++ V+ A+
Sbjct: 324 DVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTF 383
Query: 157 ----------------------LELGVSKQ---LHGLIVKRGFCG------------NVI 179
LG Q H +K+ +++
Sbjct: 384 QQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLV 443
Query: 180 LESSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ ++L+D Y KC AR +F+ I + +N V+W V++ Y G+ +A+ +F +M+
Sbjct: 444 VHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMIS 503
Query: 238 ED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV--VLGSLTEMYVKCG 293
+ + P +T + L AC+ LSS G QIH + + V V L +MY KCG
Sbjct: 504 KPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCG 563
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLA 349
++ AR + D +RN +SWTS++SGY + GR +EA ++F++M + IS+ +L
Sbjct: 564 DVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLY 623
Query: 350 GYTRSLLWKEALDFVFLMR 368
+ S + + LD+ +MR
Sbjct: 624 ACSHSGMVDQGLDYFDIMR 642
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/632 (29%), Positives = 320/632 (50%), Gaps = 45/632 (7%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+R+ SWN ++ A ++G PG LE++ M G++ T A+VL + L
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++ HGL VK G G+ +E+ L+ Y KC + DA R+FD + + N VS+ ++
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACS-FLSSPYE-------GMQIHGVIIKID 274
G +A+ +F +M R IR ++ L AC+ + Y IH ++++
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG---------- 324
F D V SL ++Y K ++++A + + +I+SW +++GY G
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 325 -------------------------RIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ AR +F+++P+ +V +WN +L+GY + L +E
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQE 300
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
+D M+ D+ TL +IL+ C+ L ++GK+VH R +++FV++ L+D
Sbjct: 301 TIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLID 360
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKF 478
+Y KCG + A I F M++R D V WN++++G A SEEA +M+ P++
Sbjct: 361 IYSKCGQVGIALIIFNMMTER-DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTES 419
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
++ +++ CA +SS+ QG+Q+H V+++ Y+ NV +L+++Y K ++ A F
Sbjct: 420 SYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCM 479
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
+++ N MI G+ N G +A+E+F M KPD +TF +L C H G V A+
Sbjct: 480 IVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAV 539
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
FF+SM YGI P +EHY C+I R E+E + +MP+ + + C
Sbjct: 540 TFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVV 599
Query: 659 NGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ A LGE++A+ L L+P P + + +N +
Sbjct: 600 HHNAELGEFSAKHLFRLDPKNPSPYVLLSNIY 631
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 239/499 (47%), Gaps = 54/499 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +++L A + C + A+ + R+ V F+ N + Y KCG++ DA
Sbjct: 39 PTNFTL-ASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVR 97
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD MP + S+ AM+G Q G L LF M+ +G+ + + ++VL + A+
Sbjct: 98 LFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACA 157
Query: 159 --------LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ +++ +H L+V++GF + + +SLVD Y K M M +A ++F+ + + + V
Sbjct: 158 GDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIV 217
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC---------------- 254
SWN+++ Y G + A+ + M P T++N L +C
Sbjct: 218 SWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 277
Query: 255 --------SFLSSPYEGMQIHGVIIKI-------DFEGDDVVLGSLTEMYVKCGRLE--- 296
+ L S Y ++H I + + + D L + + G E
Sbjct: 278 PKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGK 337
Query: 297 -----DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
R LL ++ + ++ Y+ G++ A +FN M ER+V+ WN+M++G
Sbjct: 338 QVHSASVRLLL----HNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGL 393
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
L +EA DF+ MR+ + + ++N+CA LS I G+++H + ++ Y N+
Sbjct: 394 AIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNV 453
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-Q 470
+V +L+DMY K GN+ AR++F M ++ V+WN ++ GYA+ G E+A+ F M
Sbjct: 454 YVGCSLIDMYAKSGNMDDARLFFNCMIV-KNLVAWNEMIHGYAQNGFGEKAVELFEYMLT 512
Query: 471 WETRPSKFTFETLLAACAN 489
+ +P TF +L C++
Sbjct: 513 TKQKPDSVTFIAVLTGCSH 531
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 147/280 (52%), Gaps = 6/280 (2%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K ++ AR +FD++P+ +WN +L Y Q T++LF M H V ++ T A
Sbjct: 263 KARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAV 322
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L S + + KQ+H V+ ++ + S L+D Y KC + A +F+ + ++
Sbjct: 323 ILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERD 382
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIH 267
V WN ++ + +EA F K +RE+ + P ++A+ + C+ LSS +G Q+H
Sbjct: 383 VVCWNSMISGLAIHSLSEEAFD-FLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMH 441
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
++K ++ + V SL +MY K G ++DAR + +N+++W ++ GYA +G
Sbjct: 442 AQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGE 501
Query: 328 EARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDF 363
+A ELF M + + +++ A+L G + S L EA+ F
Sbjct: 502 KAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTF 541
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 324/647 (50%), Gaps = 32/647 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y HL + C SK++ EA+K+ + + +L++ Y C + AR LFDE+P
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
WN ++ AY NG ++L+ M H GV N+ TY VL++ + L + +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H G +V + ++LVD Y KC ++ +A+R+F + +++ V+WN ++ + G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+AV + +M E I P + T L + G +HG ++ F+ VV
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC L AR + D RN +SW++++ GY S ++EA ELF++M
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM-------- 302
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ K D VTLG +L CA L+++ G+++H +I +
Sbjct: 303 ----------------------ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+I + N LL MY KCG + A I F+ +D VS++A+++G + G + A++
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDA-IRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALS 399
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F MQ P T +L AC+++++L+ G H ++I + + + AL+++Y+
Sbjct: 400 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + +A VF D++ N+MI+G+ + G EAL +F + G+KPD ITF
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L +C H G V +FD+M + I+P++EH CM+ + R G + E F+ MPF
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P V + + CR + LGE ++++ L P + F + +N +
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIY 626
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 322/617 (52%), Gaps = 35/617 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ + + Y KC ++ A +F+ + E++ WNAM+ Y NG + +ELF+DM
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG + + T+ ++L + A +L + Q H +I+K+ N+ + ++LVD Y KC + D
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++F+ + +++ V+WN I+ Y+ N EA +F +M I A+ L AC+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ Y+G Q+H + +K + D SL +MY KC
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC------------------------ 577
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
G I++AR++F+ +PE +V+S NA++AGY+++ L +EA+ M + +
Sbjct: 578 -------GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSE 629
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIWFY 435
+T I+ C + +G + HG I + +SS ++ +LL MY + A F
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
++S + V W +++G+++ G EEA+ + EM+ + P + TF T+L C+ +SSL
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGF 553
+G+ IH + ++++ + L+++Y KC ++ + +VF E +V+ NS+I G+
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N +AL++F M++ I PD ITF G+L AC H G V + F+ M +YGI +
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++H CM+ L R+GY++E +DF+ P + + CR +G GE +A +L
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Query: 674 ELNPWAPFQFKITTNRF 690
EL P + + +N +
Sbjct: 930 ELEPQNSSAYVLLSNIY 946
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 265/558 (47%), Gaps = 39/558 (6%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N ++ Y KC + A FD + E+D +WN+ML Y+ G PG+ L F+ + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ N+ T++ VL + A E + +Q+H ++K G N +LVD Y KC ++DAR
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F+ I + N V W + Y+ AG +EAV++F +M E RP + F + L
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVL---------------------GSLTEMYVKCGRLED 297
+ + G + D +V++ S+ G +
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 298 ARGLLDQPD--------------ERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
A G++ D NI +S+VS Y+ ++ A ++F + E+N +
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAM+ GY + + ++ M+ + +ID T +L+ CA +++MG + H I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + N+FV NAL+DMY KCG L AR F +M RD V+WN ++ Y + EA
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAF 514
Query: 464 TSFSEMQWETRPSKFT-FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M S + L AC ++ L QGKQ+HC ++ + ++ +L+++Y
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC ++ A +VF V+ N++I G+ N EA+ +F M G+ P ITF
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFA 633
Query: 583 GILLACIHEGNVKLALQF 600
I+ AC ++ L QF
Sbjct: 634 TIVEACHKPESLTLGTQF 651
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 228/458 (49%), Gaps = 35/458 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L CA+S + + S ++ +F+ N ++ Y KCG L+DAR +F+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD +WN ++G+Y Q+ +LF MN G+ ++ A+ L++ L KQ
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L VK G ++ SSL+D Y KC ++ DAR++F + + VS N ++ Y N
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNN 609
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG- 283
+EAVV+F +ML + P TFA + AC S G Q HG I K F + LG
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL MY+ + +A L + ++I+ WT ++SG++ +G EA + + EM V+
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
DQ T +L VC+ LS ++ G+ +H I
Sbjct: 730 P-------------------------------DQATFVTVLRVCSVLSSLREGRAIHSLI 758
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ + SN L+DMY KCG+++ + F +M +R + VSWN+++ GYA+ G +E+A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ F M Q P + TF +L AC++ + G++I
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 249/528 (47%), Gaps = 39/528 (7%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L L + K +H + G L +++VD Y KC ++ A + FD ++ K+ +WN ++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSML 132
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G + + F + I P FTF+ L C+ ++ G QIH +IK+ E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG------------ 324
+ G+L +MY KC R+ DAR + + + N + WT + SGY +G
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 325 -----------------------RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
++++AR LF EM +V++WN M++G+ + A+
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
++ F MRK++ + TLG +L+ ++ + +G VH + +SNI+V ++L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTF 480
KC + +A F + ++ D V WNA++ GYA G+S + M F +M+ FTF
Sbjct: 373 SKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+LL+ CA LE G Q H +I+ N+ ALV++Y KC LE A ++F+
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D + N++I + +E EA ++F M GI D L AC H + Q
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ K G+ L +I +Y + G +K+ + +P V M
Sbjct: 552 H-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 308/615 (50%), Gaps = 35/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF N + Y CG DAR +FDEMPERD SWN+++ A+ NG + M
Sbjct: 154 VFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMR 213
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG N + +V+ + E E +H L VK G V L ++LVD YGK +
Sbjct: 214 SGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEA 273
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ ++FD + +N VSWN + +L AG + + MF KM ++ P + T ++ L A
Sbjct: 274 SMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVE 333
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G ++HG IK + D V SL +MY K G LE
Sbjct: 334 LGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLE-------------------- 373
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+A +F +M +RNV+SWNAM+A ++ EA V M+K+ + +
Sbjct: 374 -----------KASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNS 422
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+TL +L CA ++ +KMGK++H + R ++F+SNAL+DMY KCG L AR F +
Sbjct: 423 ITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER 482
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+D VS+N ++ GY++ E++ F +M+ +F L+AC N+S +
Sbjct: 483 --SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKH 540
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IHC ++R + +L+++YTK L A ++F + + DV N+MILG+
Sbjct: 541 GKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGM 600
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + A E+F LMK +G+ DH+++ +L AC H G V ++F M + I PQ
Sbjct: 601 HGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQM 659
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G + + + + MPF + + CR +G L +WAA L EL
Sbjct: 660 HYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFEL 719
Query: 676 NPWAPFQFKITTNRF 690
P + + N +
Sbjct: 720 KPEHSGYYTLMINMY 734
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 218/476 (45%), Gaps = 38/476 (7%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMF--DDIQNKNAVSWNVIVRRYLVAGNGK 226
+V ++ L +L+ +Y + AR + ++ ++A WN + R A
Sbjct: 40 LVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPS 99
Query: 227 EAVVMFFKMLREDIRPLN--FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA+ ++ MLR +RP + F FA A + S+ +G+++H ++ D +
Sbjct: 100 EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNT 159
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L Y CG+ DAR + D+ ER+++SW S+VS + ++G +AR R ++S
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDAR--------RALVS- 210
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M ++ ++ +L ++ C E K G +H +
Sbjct: 211 ----------------------MMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVK 248
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
++ + ++NAL+DMY K G++ ++ F M + +++VSWN+ + + G + +
Sbjct: 249 VGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLE-QNEVSWNSAIGCFLNAGFYGDVLR 307
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +M + P T +LL A + S + G+++H + I+ ++++ +LV++Y
Sbjct: 308 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYA 367
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K LE A +F++ +V+ N+MI N EA + M+K G P+ IT
Sbjct: 368 KFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVN 427
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
+L AC ++K+ Q + + G++ L +I +Y + G + + R
Sbjct: 428 VLPACARMASLKMGKQ-IHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER 482
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 9/304 (2%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I+ Y KCG L AR +F E E+D S+N ++ Y+Q+ + +L LF M
Sbjct: 457 LFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRS 515
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ + +++ L + K++H ++V+R G+ L +SL+D Y K ++
Sbjct: 516 VGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVT 575
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++F+ I K+ SWN ++ Y + G A +F M + + + ++ L ACS
Sbjct: 576 ASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSH 635
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED-ARGLLDQPDERNIISWTS 315
+G + ++ + E + + ++ + G+L A + D P N W +
Sbjct: 636 GGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGA 695
Query: 316 IVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM--RK 369
++ I G I A LF PE + + M+ Y + W EA LM RK
Sbjct: 696 LLGACRIHGNIELAQWAAEHLFELKPEHSGY-YTLMINMYAETGRWNEANKIRKLMKSRK 754
Query: 370 TTKD 373
K+
Sbjct: 755 VQKN 758
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 7/331 (2%)
Query: 315 SIVSGYAISGRIREARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+++ YA + AR + P R + WN++ + + L EAL LM ++
Sbjct: 54 ALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLMLRSAV 113
Query: 373 DIDQVTLGLILNVCAGLSEI--KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D T L+ A G E+H R + +++F N L+ Y CG A
Sbjct: 114 RPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACGKACDA 173
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACAN 489
R F +M + RD VSWN++++ + G +A + M P + +++ AC
Sbjct: 174 RRVFDEMPE-RDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGT 232
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ G IH ++ V ALV++Y K +E +++VF + + NS
Sbjct: 233 EQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSA 292
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I F + + L +F M + + P IT +L A + G+ L + K
Sbjct: 293 IGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGRE-VHGYSIKRA 351
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ + ++ +Y ++G +++ +M
Sbjct: 352 MDLDIFVANSLVDMYAKFGSLEKASTIFEQM 382
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C + +++ LV + FL N ++ Y K G L A +F+++ ++D SW
Sbjct: 532 CTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASW 591
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N M+ Y +G ELF M G+ + ++Y VL + + + K+ +V
Sbjct: 592 NTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA 651
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN 224
+ + + +VD G+ ++ + D+ N+ W ++ + GN
Sbjct: 652 QNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGN 705
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 328/650 (50%), Gaps = 42/650 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER- 106
L + C +SK++ + + + +VT +FL I Y C D A+ +FD M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQL 165
+ WN ++ YT+N LELF + H + + TY +VL++ + + K +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +VK G ++++ SSLV Y KC A +F+++ K+ WN ++ Y +GN
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
KEA+ F M R P + T A+ +C+ L GM+IH +I F D + +L
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG LE A E+F +MP++ V++WN
Sbjct: 249 VDMYGKCGHLE-------------------------------MAIEVFEQMPKKTVVAWN 277
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ---VTLGLILNVCAGLSEIKMGKEVHGFI 402
+M++GY L +++ + L ++ + + TL ++ VC+ + + GK VHG+
Sbjct: 278 SMISGYG---LKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYT 334
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
RN S++F++++L+D+Y KCG + A F ++ + VSWN +++GY G+ EA
Sbjct: 335 IRNRIQSDVFINSSLMDLYFKCGKVELAENIF-KLIPKSKVVSWNVMISGYVAEGKLFEA 393
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ FSEM+ P TF ++L AC+ +++LE+G++IH +I + N V GAL+++
Sbjct: 394 LGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDM 453
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++ A VFK D++ SMI + + + ALE+F M + +KPD +TF
Sbjct: 454 YAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTF 513
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
IL AC H G V +F+ M YGIIP++EHY C+I L R G + E + + + P
Sbjct: 514 LAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNP 573
Query: 642 -FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V +L +F CR + LG AR L + +P + + +N +
Sbjct: 574 EIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMY 623
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 223/465 (47%), Gaps = 34/465 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H +P SY+ Y + + C V + + + LV + + + + Y KC
Sbjct: 98 HYPYLKPDSYT-YPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNA 156
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ A LF+EMPE+D WN ++ Y Q+G LE F M G N +T + S
Sbjct: 157 FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISS 216
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A L+L ++H ++ GF + + S+LVD YGKC + A +F+ + K V+W
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAW 276
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ Y + G+ + +F +M E ++P T ++ + CS + EG +HG I+
Sbjct: 277 NSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR 336
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ D + SL ++Y KCG++E A + + ++SW ++SGY G++ EA L
Sbjct: 337 NRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGL 396
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+E MRK+ + D +T +L C+ L+ +
Sbjct: 397 FSE-------------------------------MRKSYVEPDAITFTSVLTACSQLAAL 425
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G+E+H I +N V ALLDMY KCG + A ++ +RD VSW +++T
Sbjct: 426 EKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEA-FSVFKCLPKRDLVSWTSMITA 484
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
Y GQ+ A+ F+EM Q +P + TF +L+AC + +++G
Sbjct: 485 YGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG 529
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 310/597 (51%), Gaps = 37/597 (6%)
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEE 156
+FDEMPER+ S+ ++ Y Q+ ELF ++ G N + VL+ S E
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
ELG + +HG ++K G+ N + ++L+DAY ++ AR +FD+I +K+ VSW ++
Sbjct: 62 AELG--RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y EA+ F +M +P NFTFA L AC L + G +H ++K ++E
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V L E+Y +CG +DA W + F +M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDA--------------WRA-----------------FGDM 208
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P+ +VI W+ M++ + +S ++AL+ MR+ +Q T +L A + + + K
Sbjct: 209 PKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSK 268
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+HG + S+++FVSNAL+ Y KCG + + F +S R D VSWN ++ Y +
Sbjct: 269 TIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRND-VSWNTIIVSYVQL 327
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G E A++ FS M +++ + ++ T+ ++L ACA +++LE G Q+HC + Y +V
Sbjct: 328 GDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVG 387
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC ++ A +F D + N++I G+ + G EA+++F LMK+ K
Sbjct: 388 NALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCK 447
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF G+L AC + G + Q+F SM+ YGI P +EHY CM+ L R G + +
Sbjct: 448 PDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVK 507
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
F+ +PF P+V + R + C + LG +A+R+ EL P + +N + R
Sbjct: 508 FIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYAR 564
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 204/422 (48%), Gaps = 33/422 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y G + AR +FDE+ +D SW M+ +Y +N LE F M +
Sbjct: 82 FIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVA 141
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G N T+A VL++ K +H ++K + ++ + L++ Y +C DA
Sbjct: 142 GFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDA 201
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R F D+ + + W+ ++ R+ +G ++A+ +F +M R + P FTF++ L A + +
Sbjct: 202 WRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADI 261
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S IHG +K D V +L Y KCG +E + L + +RN +SW +I+
Sbjct: 262 ESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTII 321
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
Y G A LF+ M V +V
Sbjct: 322 VSYVQLGDGERALSLFSNMLRYQV-------------------------------QATEV 350
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T IL CA L+ +++G +VH + Y ++ V NAL+DMY KCG+++ AR F M
Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMF-DM 409
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
RDKVSWNA++ GY+ G EA+ F+ M + + +P + TF +L+AC+N L++G
Sbjct: 410 LDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEG 469
Query: 497 KQ 498
KQ
Sbjct: 470 KQ 471
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 13/322 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + Q A +++ ++ + + + + VF+ N + CY KCG ++ + LF+ +
Sbjct: 251 FSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALS 310
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+R+ SWN ++ +Y Q G R L LF +M V A ++TY+++LR+ A L + Q
Sbjct: 311 DRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQ 370
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L K + +V + ++L+D Y KC + DAR MFD + ++ VSWN I+ Y + G
Sbjct: 371 VHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGL 430
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G EA+ MF M +P TF L ACS EG Q + +K D+ G + +
Sbjct: 431 GVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFTSMKQDY-GIEPCMEH 488
Query: 285 LTEMYVKCGR---LEDARGLL-DQPDERNIISWTSIVSGYAIS-----GRIREARELFNE 335
T M GR L+ A + D P E +++ W +++ I GRI R L E
Sbjct: 489 YTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVL--E 546
Query: 336 MPERNVISWNAMLAGYTRSLLW 357
+ R+ S + Y R+ W
Sbjct: 547 LEPRDEASHVLLSNIYARARRW 568
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 190/654 (29%), Positives = 328/654 (50%), Gaps = 33/654 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
++ S +A + + CAS++ + A++ + + +L N ++ YGKCG++ DAR
Sbjct: 9 AIAISSHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDARE 68
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD + R+ SW MLGAY NG L LF ++ G++ + +T + L++ A +
Sbjct: 69 VFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGD 128
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + +H G+ +I+ ++LV YGKC + +A+ +F + +N VSWN ++
Sbjct: 129 LEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAA 188
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G+ +EAV ++ M E I+P TF + L + G +IH +++ F +
Sbjct: 189 YAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDG--WKGEGEHGTRIHDQVLESGFGSN 246
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L MY GR++DAR + D E+ ++SW ++++ YA +GR +A +LF +M E
Sbjct: 247 TTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDE 306
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
MR+ + + VT +L CA ++ G+++
Sbjct: 307 ----------------------------MRRALVEPNSVTFVNLLVACAATGFLEAGRKI 338
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + S + V AL++MY +CGNL A+ F + ++ VSWN ++ YA G
Sbjct: 339 HAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPH-KNLVSWNVLIGSYAGDGD 397
Query: 459 SEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EA+ +M+ E +P KFTF ++L AC+ +L +GK IH + + E + A
Sbjct: 398 GKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTA 457
Query: 518 LVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+ +Y KC LE A VF + S +++ NSM+ C + +E+ +M EGI P
Sbjct: 458 LINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMP 517
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +TF +L AC H G+++ L F S YGI +HY C++ + R G ++E ++
Sbjct: 518 DELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEV 577
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+NRMPF + CR + G AA + EL+P + + + F
Sbjct: 578 LNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYALLSTMF 631
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 317/635 (49%), Gaps = 36/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QLCA K++ + +++ S + + L + + Y CG+L R +FD +
Sbjct: 60 YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGIL 119
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
WN ++ Y + G ++ LF M G+ + T+ VL+ A ++ K+
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++K GF + +SL+ AY KC + AR +FD++ +++ VSWN ++ + G
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGF 239
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ + F +ML + + T N L AC+ + + G +H +K F G + +
Sbjct: 240 SRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNT 299
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG L A E+F +M E ++SW
Sbjct: 300 LLDMYSKCGNLNGAN-------------------------------EVFVKMGETTIVSW 328
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+++A + R L EA+ M+ D + +++ CA + + G+EVH I +
Sbjct: 329 TSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKK 388
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N+ SN+ VSNAL++MY KCG++ A + F Q+ + + VSWN ++ GY++ EA+
Sbjct: 389 NNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK-NIVSWNTMIGGYSQNSLPNEALQ 447
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVY 522
F +MQ + +P T +L ACA +++LE+G++IH ++R Y +++V C ALV++Y
Sbjct: 448 LFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVAC--ALVDMY 505
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L A ++F D+I+ MI G+ + G+EA+ F M+ GI+P+ +F
Sbjct: 506 VKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFT 565
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
IL AC H G +K + FDSM+ + I P+LEHY CM+ L R G + F+ MP
Sbjct: 566 SILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPI 625
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR + L E A + EL P
Sbjct: 626 KPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEP 660
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 197/641 (30%), Positives = 324/641 (50%), Gaps = 38/641 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++ ++ + CA+ + + R ++ ++ VF+ I+ Y KC ++D A
Sbjct: 246 PNSFT-FSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVK 304
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
F MP R+ SW ++ + Q F +M G N T +VL + E +
Sbjct: 305 EFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVM 364
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVR 217
+ + QLH I K GF + + S+L++ Y K V+ + R+F ++++ KN W V++
Sbjct: 365 IKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMIS 424
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ +G+ AV +F +ML+E +RP F ++ L S + S G IH I+KI
Sbjct: 425 AFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCYILKIGLFT 481
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL MY KCG LE E+ +F +MP
Sbjct: 482 DISVGSSLFTMYSKCGSLE-------------------------------ESYTVFEQMP 510
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+++ +SW +M+ G++ ++A+ M DQ+TL L C+ L ++ GKE
Sbjct: 511 DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE 570
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG+ R + V AL++MY KCG + AR F + Q+ D+ S +++++GYA+ G
Sbjct: 571 VHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQK-DQFSCSSLVSGYAQNG 629
Query: 458 QSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E+A+ F E++ + FT +++ A A ++SL+ G Q+H V + V
Sbjct: 630 YIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGS 689
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+LV +Y+KC ++ +VF++ D+I +MI+ + + +G EAL+V+ LM+KEG KP
Sbjct: 690 SLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKP 749
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +TF G+L AC H G V+ +SM +YGI P HY CM+ L R G +KE E F
Sbjct: 750 DSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERF 809
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+N MP P + + C+ +G LG AA+R+ EL P
Sbjct: 810 INNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEP 850
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 238/513 (46%), Gaps = 37/513 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ N + Y K ++ A LFD+ P + SWN ++ QN + F M S
Sbjct: 82 FMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFS 141
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G NQ TY +VL + + ++ L +K GF N + + ++D + K DA
Sbjct: 142 GFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDA 201
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R+F D+ +N V WN I+ + A+ +F +M P +FTF++ L AC+ L
Sbjct: 202 LRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAAL 261
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G + G +IK G+DV +G+ + ++Y KC ++ A + RN++SWT+I
Sbjct: 262 EELEFGRGVQGWVIKCG-AGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTI 320
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG+ A F E MRK + I+
Sbjct: 321 ISGFVQKDDSISAFHFFKE-------------------------------MRKVGEKINN 349
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +L C IK ++H +I + + + VS+AL++MY K G + + F +
Sbjct: 350 YTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFRE 409
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M ++ W +++ +A+ G + A+ F M E RP KF ++L+ I SL
Sbjct: 410 MESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSL 466
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+ IHC++++ ++ +L +Y+KC LE + VF++ D + SMI GF
Sbjct: 467 GRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSE 526
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
++ +A+++F M E I+PD +T L AC
Sbjct: 527 HDHAEQAVQLFREMLLEEIRPDQMTLTAALTAC 559
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 219/486 (45%), Gaps = 45/486 (9%)
Query: 162 SKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+K LH +K N + +SL+ Y K M A R+FD + N +SWN+++
Sbjct: 64 TKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCN 123
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+ +++ F KM P FT+ + L AC+ L SP G ++ + +K F +
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGY 183
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V + +++ K EDA + N++ W +I+SG + A +LF +M R
Sbjct: 184 VRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCR- 242
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
F M + T IL CA L E++ G+ V G
Sbjct: 243 ------------------------FFMP------NSFTFSSILTACAALEELEFGRGVQG 272
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++ + ++FV A++D+Y KC ++ A F +M R+ VSW +++G+ ++ S
Sbjct: 273 WVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPI-RNVVSWTTIISGFVQKDDSI 331
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
A F EM + + + +T ++L AC +++ Q+H ++ + + ++ AL+
Sbjct: 332 SAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALI 391
Query: 520 EVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+Y+K ++ + RVF+E S+ ++ + MI F + A+E+F M +EG++PD
Sbjct: 392 NMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDK 451
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELED 635
+L ++ +L + C K G+ + + +Y + G ++E
Sbjct: 452 FCSSSVL-------SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYT 504
Query: 636 FVNRMP 641
+MP
Sbjct: 505 VFEQMP 510
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 165/355 (46%), Gaps = 3/355 (0%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ N S++ Y S + A LF++ P NVISWN +++G ++ ++++
Sbjct: 78 QSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCK 137
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MR + D +Q T G +L+ C L G+ V+ +N + SN +V ++D++ K +
Sbjct: 138 MRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCS 197
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLA 485
A + +Q + V WNA+++G + ++ A+ F +M P+ FTF ++L
Sbjct: 198 FEDA-LRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILT 256
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
ACA + LE G+ + +VI+ +V A++++Y KC ++ A++ F +V+
Sbjct: 257 ACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVS 316
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
++I GF + A F M+K G K ++ T +L AC +K A+Q S
Sbjct: 317 WTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQ-LHSWI 375
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
K G +I +Y + G + E M + M + ++G
Sbjct: 376 FKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSG 430
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 107/204 (52%), Gaps = 3/204 (1%)
Query: 387 AGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+G ++ K +H F+ SN F++N+L+ Y K ++ A + + + + +S
Sbjct: 56 SGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHA-LRLFDKTPHPNVIS 114
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN +++G + E++ +F +M++ P++FT+ ++L+AC + S G+ ++ +
Sbjct: 115 WNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLAL 174
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+N + N R +++++ K C E A+RVF++ +V+ N++I G N AL+
Sbjct: 175 KNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALD 234
Query: 565 VFGLMKKEGIKPDHITFHGILLAC 588
+F M P+ TF IL AC
Sbjct: 235 LFCQMCCRFFMPNSFTFSSILTAC 258
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 314/610 (51%), Gaps = 39/610 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y K +++D +FDEM ++ SW ++L Y QNG + L+LF M G+ N
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+A VL A + + Q+H +++K G + + +S+V+ Y K ++++DA+ +FD
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++N+NAVSWN ++ ++ G EA +F++M E ++ FA + C+ +
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAI 322
Q+H +IK + D + +L Y KC ++DA L +N++SWT+I+SGY
Sbjct: 314 KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQ 373
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+GR A LF + MR+ + T I
Sbjct: 374 NGRTDRAMNLFCQ-------------------------------MRREGVRPNHFTYSTI 402
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L A +S ++H + + +Y ++ V AL D Y K G+ A F ++ +D
Sbjct: 403 LTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIF-ELIDEKD 457
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN-ISSLEQGKQIH 500
V+W+A+L+GYA+ G E A+ F ++ E P++FTF ++L ACA +S+EQGKQ H
Sbjct: 458 IVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 517
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
I++ + + ALV +Y K +E A VFK D++ NSMI G+ + G+
Sbjct: 518 SCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGK 577
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
++L++F M+ + ++ D ITF G++ AC H G V ++FD M Y I+P +EHY CM
Sbjct: 578 KSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCM 637
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ LY R G +++ D +N+MPF + R + CR + LGE AA +L L P
Sbjct: 638 VDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDS 697
Query: 681 FQFKITTNRF 690
+ + +N +
Sbjct: 698 AAYVLLSNIY 707
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 261/545 (47%), Gaps = 36/545 (6%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
++ LFDE P++ N +L +++N L LFL + SG + + + VL+
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ V KQ+H +K GF +V + +SLVD Y K + D R+FD+++ KN VSW +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y G ++A+ +F +M E I+P FTFA L + + +G+Q+H ++IK
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ V S+ MY K + DA+ + D + RN +SW S+++G+ +G EA ELF
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF-- 282
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ MR + Q ++ +CA + E+
Sbjct: 283 -----------------------------YRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K++H + +N ++ + AL+ Y KC + A F M ++ VSW A+++GY +
Sbjct: 314 KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQ 373
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G+++ AM F +M+ E RP+ FT+ T+L A A +S QIH V++ YE +
Sbjct: 374 NGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSV 429
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL + Y+K A ++F+ D++ ++M+ G+ A+++F + KEG+
Sbjct: 430 GTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGV 489
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+P+ TF +L AC + F S K G L ++ +Y + G ++
Sbjct: 490 EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESAN 549
Query: 635 DFVNR 639
+ R
Sbjct: 550 EVFKR 554
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 178/337 (52%), Gaps = 12/337 (3%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
++ +++A + +LCA+ K + A++L ++ + + + Y KC +DDA L
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 100 FDEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
F M ++ SW A++ Y QNG R + LF M GV N TY+ +L ++A
Sbjct: 352 FCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA---- 407
Query: 159 LGVS-KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
VS Q+H L+VK + + + ++L D+Y K +A ++F+ I K+ V+W+ ++
Sbjct: 408 -AVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFE 276
Y G+ + AV +F ++ +E + P FTF++ L AC+ ++ E G Q H IK F
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS 526
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L MY K G +E A + + +R+++SW S++SGYA G +++ ++F EM
Sbjct: 527 NALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM 586
Query: 337 PERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+N+ I++ +++ T + L E + LM K
Sbjct: 587 RSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK 623
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 162/311 (52%), Gaps = 10/311 (3%)
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+++LF+E P++ + N +L ++R+ KEAL+ +R++ D +L +L VC
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
L + +GK+VH + + ++ V +L+DMY K ++ F +M + ++ VSW
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVSWT 162
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++L GY + G +E+A+ FS+MQ E +P+ FTF +L A ++E+G Q+H VI++
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ + ++V +Y+K + A VF + + + NSMI GF N EA E+F
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M+ EG+K F ++ C N+K + F + C+ +I ++ IK
Sbjct: 283 YRMRLEGVKLTQTIFATVIKLC---ANIK-EMSFAKQLHCQ--VIKNGSDFDLNIKTALM 336
Query: 627 YGYMK--ELED 635
Y K E++D
Sbjct: 337 VAYSKCSEIDD 347
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 326/647 (50%), Gaps = 32/647 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y HL + C SK++ EA+K+ + + +L++ Y C + AR LFDE+P
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
WN ++ AY NG ++L+ M H GV N+ TY VL++ + L + +
Sbjct: 71 NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H G +V + ++LVD Y KC ++ +A+R+F + +++ V+WN ++ + G
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+AV + +M E I P + T L + G +HG ++ F+ VV
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC L AR + D RN +SW++++ GY S ++EA ELF++M
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM-------- 302
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ K D VTLG +L CA L+++ G+++H +I +
Sbjct: 303 ----------------------ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+I + N LL MY KCG + A +F +M+ +D VS++A+++G + G + A++
Sbjct: 341 LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNP-KDSVSFSAIVSGCVQNGNAAVALS 399
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F MQ P T +L AC+++++L+ G H ++I + + + AL+++Y+
Sbjct: 400 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + +A VF D++ N+MI+G+ + G EAL +F + G+KPD ITF
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L +C H G V +FD+M + I+P++EH CM+ + R G + E F+ MPF
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P V + + CR + LGE ++++ L P + F + +N +
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIY 626
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/634 (30%), Positives = 315/634 (49%), Gaps = 33/634 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE-M 103
Y+ + QLCA K + E + + S + + L + + Y CG L + R +FD +
Sbjct: 454 YSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHIL 513
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+ WN M+ Y + G ++ LF M G++ N T++ +L+ A +G K
Sbjct: 514 SDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECK 573
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++HG + K GF + +SL+ Y K + A ++FD++ +++ VSWN ++ ++ G
Sbjct: 574 RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
A+ F +ML + T N++ AC+ + S G +HG +K F + +
Sbjct: 634 FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG L DA + F +M ++ V+S
Sbjct: 694 TLLDMYSKCGNLNDAI-------------------------------QAFEKMGQKTVVS 722
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W +++A Y R L+ +A+ + M D ++ +L+ CA + + G++VH +I
Sbjct: 723 WTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIR 782
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+N+ + + VSNAL+DMY KCG++ A + F Q+ + D VSWN ++ GY++ EA+
Sbjct: 783 KNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGGYSKNSLPNEAL 841
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F+EMQ E+RP T LL AC ++++LE G+ IH ++RN Y + AL+++Y
Sbjct: 842 KLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYV 901
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC L +A +F D+I MI G + G EA+ F M+ GIKPD ITF
Sbjct: 902 KCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTS 961
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
IL AC H G + FF+SM + + P+LEHY CM+ L R G + + + + MP
Sbjct: 962 ILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIK 1021
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR + L E A + EL P
Sbjct: 1022 PDATIWGALLCGCRIHHDVELAEKVAEHVFELEP 1055
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 364 VFLMRKTTK-DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
V L+R + K ++D IL +CA ++ GK VH I N + L+ MY
Sbjct: 438 VELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYV 497
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFE 481
CG LR R F + WN +++ YA+ G E++ F +MQ + +TF
Sbjct: 498 SCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFS 557
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+L A + + + K+IH V + + +L+ Y K ++ A ++F E
Sbjct: 558 CILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR 617
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
DV+ NSMI G N ALE F M + D T + AC + G++ L
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLG 673
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/663 (28%), Positives = 330/663 (49%), Gaps = 46/663 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN-GFPGRTLELF 131
P+P + N A+ + G+LD AR L MP R+ SWN ++ A ++ G G +E++
Sbjct: 70 PSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMY 129
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M G+ T A+VL + LG ++ HG+ VK G N +E++L+ Y KC
Sbjct: 130 GRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKC 189
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ DA R+F + N VS+ ++ G+ +A+ +F +M R + + ++ L
Sbjct: 190 GSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVL 249
Query: 252 FACS-FLSSPYE-------GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
AC+ ++ Y G IH ++++ F D V SL +MY KC +++A + +
Sbjct: 250 GACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFE 309
Query: 304 QPDERNIISWTSIVSGYAISGR-----------------------------------IRE 328
I+SW +++G+ G +
Sbjct: 310 SLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHS 369
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR +F+++ +V +WN +L+GY + ++ ++ M+ D+ TL +IL+ C+
Sbjct: 370 ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSK 429
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L + G++VH R +++FV++ L+DMY KCG + AR F +M++R D V WN+
Sbjct: 430 LGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER-DVVCWNS 488
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++G ++EA F +M+ P++ ++ +++ +C+ +SS+ G+QIH V+++
Sbjct: 489 IISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDG 548
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
Y+ NV AL+++Y KC ++ A F +++ N MI G+ N G +A+E+F
Sbjct: 549 YDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFE 608
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M KPD +TF +L C H G V A+ FF+SM YGIIP EHY C+I R
Sbjct: 609 YMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRA 668
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G E+E +++MP + + C + A LG+ AA L ++P P + + +
Sbjct: 669 GRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLS 728
Query: 688 NRF 690
N +
Sbjct: 729 NIY 731
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 270/603 (44%), Gaps = 79/603 (13%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L A + C A+ + R+ V F+ N + Y KCG++ DA
Sbjct: 139 PTHFTL-ASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVR 197
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LF M + S+ AM+G Q G L LF M SGV + ++ ++VL + A+
Sbjct: 198 LFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACA 257
Query: 159 LGVS--------KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
S + +H L+V++GF + + +SL+D Y KC+ M +A ++F+ + + V
Sbjct: 258 TDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIV 317
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC---------------- 254
SWN+++ + G+ +AV + M P T++N L +C
Sbjct: 318 SWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKI 377
Query: 255 --------SFLSSPYEGMQIHGVIIKI-------DFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ L S Y + H I++ + + D L + K G L+ R
Sbjct: 378 SRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGR 437
Query: 300 GLLDQPD----ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ ++ + +V Y+ G+I AR +FN+M ER+V+ WN++++G T
Sbjct: 438 QVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHS 497
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L KEA DF MR+ + + ++N C+ LS I G+++H + ++ Y N++V +
Sbjct: 498 LNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGS 557
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETR 474
AL+DMY KCGN+ AR++F M ++ V+WN ++ GYA+ G ++A+ F M E +
Sbjct: 558 ALIDMYAKCGNMDDARLFFDTM-MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQK 616
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P TF +L C++ S L + N Y I L E YT CL A+
Sbjct: 617 PDAVTFIAVLTGCSH-SGLVDKAMAFFNSMENSYGII-----PLAEHYT---CLIDAL-- 665
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
R +EV L+ K K D I + +L AC+ N
Sbjct: 666 ----------------------GRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNA 703
Query: 595 KLA 597
+L
Sbjct: 704 ELG 706
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 188/401 (46%), Gaps = 19/401 (4%)
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D + L E+Y + G A N S+ + +S +G + AR+L MP
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 338 ERNVISWNAMLAGYTRSLL-WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
RN +SWN +++ RS EA++ MR TL +L+ C GL+ + G+
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
HG + +N FV NALL MY KCG++ A FY M+ R ++VS+ A++ G A+
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMA-RPNEVSFTAMMGGLAQT 220
Query: 457 GQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ--------GKQIHCFVIRNC 507
G ++A+ F+ M P + ++L ACA + + G+ IH V+R
Sbjct: 221 GSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKG 280
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ + +L+++YTKC ++ A++VF+ S+ ++ N +I GF +A+EV
Sbjct: 281 FGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLS 340
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
LM++ G +P+ +T+ +L +CI +V A FD + P + + ++ YC+
Sbjct: 341 LMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLLSGYCQE 395
Query: 628 GYMKELEDFVNRMPFNPTVP---MLRKIFDKCRKNGYATLG 665
++ + RM P L I C K G G
Sbjct: 396 EQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFG 436
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 207/505 (40%), Gaps = 109/505 (21%)
Query: 177 NVILESSLVDAYGKCMV-------------------------------MTDARRMFDDIQ 205
+ L + LV+ Y + + + AR + +
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 206 NKNAVSWNVIVRRYLVA-GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+NAVSWN ++ + G+G EAV M+ +M E + P +FT A+ L AC L++ +G
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+ HGV +K+ + + V +L MY KCG + DA L N +S+T+++ G A +G
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTG 221
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
I +A LF M V +D V++ +L
Sbjct: 222 SIDDALRLFARMCRSGV-------------------------------PVDPVSVSSVLG 250
Query: 385 VCAG--------LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
CA ++G+ +H + R + S+ V N+L+DMY KC + A + ++
Sbjct: 251 ACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEA-VKVFE 309
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
VSWN ++TG+ + G +A+ S MQ P++ T+ LLA+C +
Sbjct: 310 SLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCI------K 363
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
+ +H A +F + S V N+++ G+C
Sbjct: 364 ARDVHS-----------------------------ARAMFDKISRPSVTTWNTLLSGYCQ 394
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
E+ ++ +E+F M+ + ++PD T IL +C G + Q S ++ + +
Sbjct: 395 EEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVH-SASVRFLLHNDMF 453
Query: 616 HYECMIKLYCRYGYMKELEDFVNRM 640
++ +Y + G + N+M
Sbjct: 454 VASGLVDMYSKCGQIGIARSIFNKM 478
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 328/646 (50%), Gaps = 39/646 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+F +CA S R++ V F V + ++ Y K N++D R +FDEM ER+
Sbjct: 99 VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW ++L Y+ NG G ELF M + GV N+ T + V+ + E +G+ Q+H
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++VK GF + + +SL+ Y + ++ DAR +FD ++ ++ V+WN ++ Y+ G E
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLE 278
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+F KM ++P + TFA+ + +C+ L + +K F D +V+ +L
Sbjct: 279 VFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV 338
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE-RNVISWNA 346
KC ++DA L F+ M E +NV+SW A
Sbjct: 339 ALSKCKEMDDALSL-------------------------------FSLMEEGKNVVSWTA 367
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
M++G ++ +A++ MR+ + T IL V + E+H + + +
Sbjct: 368 MISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV----FVSEMHAEVIKTN 423
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
Y + V ALLD Y K GN A + +++ + +D ++W+A+L GYA+ G++EEA F
Sbjct: 424 YERSSSVGTALLDAYVKLGNTIDA-VKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLF 482
Query: 467 SEMQWE-TRPSKFTFETLLAACAN-ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
++ E +P++FTF +++ ACA+ ++ EQGKQ H + I+ + ALV +Y K
Sbjct: 483 HQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAK 542
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
++ A VFK D++ NSMI G+ + + ++ALEVF M+K + D +TF G+
Sbjct: 543 RGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGV 602
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
+ AC H G V+ ++F+SM + I P ++HY CMI LY R G +++ +N MPF P
Sbjct: 603 ITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPP 662
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ R + R + LGE AA +L L P + + +N +
Sbjct: 663 GATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMY 708
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 212/457 (46%), Gaps = 45/457 (9%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
++ +A + + CAS + + + ++ + T ++ + KC +DDA LF
Sbjct: 294 THMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLF 353
Query: 101 DEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
M E ++ SW AM+ QNG + + LF M GV N TY+ +L +
Sbjct: 354 SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL---TVHYPV 410
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
VS ++H ++K + + + ++L+DAY K DA ++F+ I+ K+ ++W+ ++ Y
Sbjct: 411 FVS-EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGY 469
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGD 278
G +EA +F ++++E I+P FTF++ + AC+ ++ E G Q H IK+
Sbjct: 470 AQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNA 529
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L MY K G ++ A + + ER+++SW S++SGY+ G+ ++A E+F+EM +
Sbjct: 530 LCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGK 396
RN+ D+D VT ++ C AGL E K K
Sbjct: 590 RNM-------------------------------DVDAVTFIGVITACTHAGLVE-KGQK 617
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+ I+ + + + + ++D+Y + G L A +M W +L G AR
Sbjct: 618 YFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL-GAARV 676
Query: 457 GQSEE----AMTSFSEMQWETRPSKFTFETLLAACAN 489
++ E A +Q E + + AA N
Sbjct: 677 HRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGN 713
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 188/393 (47%), Gaps = 36/393 (9%)
Query: 197 ARRMFDDIQNKNAV--SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A +FD I ++ N ++ Y KEA+ +F +L ++P T + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ G Q+H +K GL+D ++ T
Sbjct: 104 AGSLDGKLGRQVHCQCVKF--------------------------GLVD-----HVSVGT 132
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S+V Y + + + R +F+EM ERNV+SW ++LAGY+ + L+ + M+
Sbjct: 133 SLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLP 192
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
++ T+ ++ + +G +VH + ++ + I V N+L+ +Y + G LR AR F
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVF 252
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M + RD V+WN+++ GY R GQ E F++MQ +P+ TF +++ +CA++ L
Sbjct: 253 DKM-EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILG 552
K + C +++ + + + AL+ +KC ++ A+ +F +V+ +MI G
Sbjct: 312 ALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISG 371
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
N +A+ +F M++EG+KP+H T+ IL
Sbjct: 372 CLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL 404
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 329 ARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
A LF+++P R + N +L Y+R KEAL+ + ++ D+ TL + N+C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
AG + K+G++VH + ++ V +L+DMY K N+ R F +M +R + VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGER-NVVSW 162
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
++L GY+ G F +MQ+E P+++T T++AA N + G Q+H V++
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK 222
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ +E + +L+ +Y++ L A VF + D + NSMI G+ N + E E+
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEI 282
Query: 566 FGLMKKEGIKPDHITFHGILLAC 588
F M+ G+KP H+TF ++ +C
Sbjct: 283 FNKMQLAGVKPTHMTFASVIKSC 305
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 132/294 (44%), Gaps = 10/294 (3%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y K GN DA +F+ + +D +W+AML Y Q G +LF + G+ N+
Sbjct: 435 LDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNE 494
Query: 144 ITYANVLRSSAEELELG-VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
T+++V+ + A KQ H +K + + S+LV Y K + A +F
Sbjct: 495 FTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK 554
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+ ++ VSWN ++ Y G K+A+ +F +M + ++ TF + AC+ +
Sbjct: 555 RQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEK 614
Query: 263 GMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
G + +I D + + + ++Y + G LE A G++++ P W +++
Sbjct: 615 GQKYFNSMIN-DHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGA 673
Query: 320 YAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ + A +L + PE + ++ + Y + W+E + LM K
Sbjct: 674 ARVHRNVELGELAAEKLISLQPEDSA-AYVLLSNMYAAAGNWQERTNVRKLMDK 726
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 401 FIHRNDYSSNI-FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS-WNAVLTGYARRGQ 458
FIH YS ++ F+SN +L + NL F ++ R + N +L Y+R Q
Sbjct: 23 FIH---YSISLKFISNTVLCVPHIAHNL------FDKIPHRPTTLKEHNQLLFSYSRDKQ 73
Query: 459 SEEAMTSF-SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
++EA+ F S + +P + T + CA + G+Q+HC ++ +V +
Sbjct: 74 TKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTS 133
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y K + RVF E +V+ S++ G+ N E+F M+ EG+ P+
Sbjct: 134 LVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPN 193
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
T ++ A ++EG V + LQ +M K+G + + +I LY R G +++ D
Sbjct: 194 RYTVSTVIAALVNEGVVGIGLQ-VHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVF 252
Query: 638 NRM 640
++M
Sbjct: 253 DKM 255
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 283/497 (56%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P +TF L +C+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ ++ D V SL MYV+ GRLEDAR + DQ R+++S+T++
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G I A+++F+E+P ++V+SWNAM++GY + KEAL+ M KT D+
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA + I++G++VH +I + + SN+ + NAL+D+Y KCG + +A F
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D +SWN ++ GY +EA+ F EM + P+ T ++L ACA++ ++E
Sbjct: 296 LSY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEI 354
Query: 496 GKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + R +L+++Y KC +E A +VF + + N+MI GF
Sbjct: 355 GRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGF 414
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++F M+K I+PD ITF G+L AC H G + L F SM+ Y I P+
Sbjct: 415 AMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPK 474
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE E+ +N M P + + C+ LGE A+ L
Sbjct: 475 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLI 534
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 535 KIEPKNPGSYVLLSNIY 551
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 248/546 (45%), Gaps = 105/546 (19%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P L L++ M G+ N T+ +L+S A+
Sbjct: 56 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR----------------- 198
+Q+HG ++K G+ ++ + +SL+ Y + + DAR
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175
Query: 199 --------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+MFD+I K+ VSWN ++ Y GN KEA+ +F +M++ ++RP
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + + AC+ +S G Q+H I F + ++ +L ++Y+KCG +E A GL +
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 295
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY T L+KEAL
Sbjct: 296 LSYKDVISWNTLIGGY-------------------------------THMNLYKEALLLF 324
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-----DYSSNIFVSNALLD 419
M ++ + + VT+ IL CA L I++G+ +H +I++ + SS+ +L+D
Sbjct: 325 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH---RTSLID 381
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKF 478
MY KCG++ +A+ F + R SWNA++ G+A G++ A FS M+ E P
Sbjct: 382 MYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 440
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF LL+AC++ L+ G+ I R+ E +K +
Sbjct: 441 TFVGLLSACSHSGMLDLGRHI----FRSMKE------------------------DYKIT 472
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
L+ C +LG H+ +EA E+ M+ E PD + + +L AC NV+L
Sbjct: 473 PKLEHYGCMIDLLG--HSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMYANVELGE 527
Query: 599 QFFDSM 604
+ ++
Sbjct: 528 SYAQNL 533
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 204/472 (43%), Gaps = 87/472 (18%)
Query: 32 GHLKSDEPVSYSLYAH-----------------LFQLCASSKAIVEARKLESNLVTFYPT 74
GH S +PVS +LY + L + CA SKA E +++ +++
Sbjct: 77 GHALSSDPVS-ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 135
Query: 75 PPVFLLNRAIECYGKCGNLDDARG-------------------------------LFDEM 103
+++ I Y + G L+DAR +FDE+
Sbjct: 136 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 195
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P +D SWNAM+ Y + G LELF +M + V ++ T +V+ + A+ + + +
Sbjct: 196 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 255
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H I GF N+ + ++L+D Y KC + A +F+ + K+ +SWN ++ Y
Sbjct: 256 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN 315
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDV 280
KEA+++F +MLR P + T + L AC+ L + G IH V I +G
Sbjct: 316 LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH-VYINKRLKGVANASS 374
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
SL +MY KCG +E A+ + D R++ SW +++ G+A+ GR A ++F+
Sbjct: 375 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSR----- 429
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
MRK + D +T +L+ C+ + +G+ +
Sbjct: 430 --------------------------MRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFR 463
Query: 401 FIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ + DY + + ++D+ G + A M D V W ++L
Sbjct: 464 SM-KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 514
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 282/498 (56%), Gaps = 6/498 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ + D V SL MYV+ GRLEDA + D+ R+++S+T++
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GYA G I A+++F+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 223
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I + + SN+ + NAL+D+Y KCG L +A ++
Sbjct: 224 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETA-CGLFE 282
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLE 494
+D +SWN ++ GY +EA+ F EM ET P+ T ++L ACA++ +++
Sbjct: 283 GLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAID 341
Query: 495 QGKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G+ IH ++ + + R +L+++Y KC +E A +VF + N+MI G
Sbjct: 342 IGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 401
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F + R + ++F M+K GI+PD ITF G+L AC H G + L F SM Y + P
Sbjct: 402 FAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 461
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY CMI L G KE E+ +N M P + + C+ +G LGE A+ L
Sbjct: 462 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNL 521
Query: 673 NELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 522 IKIEPENPGSYVLLSNIY 539
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 239/539 (44%), Gaps = 99/539 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P L+L++ M G+ N T+ +L+S A+
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103
Query: 156 ELELGVSKQLHGLIVKRG--------------FCGNVILE-----------------SSL 184
+Q+HG ++K G + N LE ++L
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+ Y + +A++MFD+I K+ VSWN ++ Y GN KEA+ +F M++ ++RP
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 223
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + AC+ S G Q+H I F + ++ +L ++Y KCG LE A GL +
Sbjct: 224 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEG 283
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY T L+KEAL
Sbjct: 284 LPYKDVISWNTLIGGY-------------------------------THMNLYKEALLLF 312
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + + VT+ IL CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 313 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYA 372
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KCG++ +A F + + SWNA++ G+A G+++ + FS M+ P TF
Sbjct: 373 KCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFV 431
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC++ L+ G+ I + ++ +K + L
Sbjct: 432 GLLSACSHSGMLDLGRHIFRSMTQD----------------------------YKMTPKL 463
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ C +LG H+ +EA E+ M+ E PD + + +L AC GNV+L F
Sbjct: 464 EHYGCMIDLLG--HSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELGESF 517
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 200/458 (43%), Gaps = 70/458 (15%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLE---------------SNLVTFY----------- 72
P SY+ + L + CA SKA E +++ ++L++ Y
Sbjct: 89 PNSYT-FPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 147
Query: 73 -----PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
P V I+ Y G +++A+ +FDE+P +D SWNAM+ Y + G
Sbjct: 148 VFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEA 207
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF DM + V ++ T V+ + A+ + + +Q+H I GF N+ + ++L+D
Sbjct: 208 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDL 267
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F+ + K+ +SWN ++ Y KEA+++F +MLR P + T
Sbjct: 268 YSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 327
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G + SL +MY KCG +E A + +
Sbjct: 328 LSILPACAHLGAIDIGRWIH-VYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNS 386
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ SW +++ G+A+ GR + ++F+
Sbjct: 387 ILHKSLSSWNAMIFGFAMHGRADASFDIFSR----------------------------- 417
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYR 422
MRK + D +T +L+ C+ + +G+ + + DY + + ++D+
Sbjct: 418 --MRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM-TQDYKMTPKLEHYGCMIDLLG 474
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
G + A M D V W ++L G E
Sbjct: 475 HSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 512
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 283/498 (56%), Gaps = 6/498 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN ++R + ++ + ++ ++ M+ + P ++TF L +C+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ F+ D V SL MYV+ RLEDA + D+ R+++S+T++
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G IR A++LF+E+P ++V+SWNAM++GY + +KEAL+ M K D+
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T +L+ CA I++G++VH ++ + + SN+ + NAL+D+Y KCG + +A F
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLE 494
+S +D +SWN ++ GY +EA+ F EM ET P+ T ++L ACA++ +++
Sbjct: 257 LSY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSVLPACAHLGAID 314
Query: 495 QGKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G+ IH ++ + + R +L+++Y KC +E A +VF + N+MI G
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F + R + ++F M+K GI+PD ITF G+L AC H G + L F SM Y + P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY CMI L G KE E+ +N M P + + C+ +G L E A+ L
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494
Query: 673 NELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 495 IKIEPENPSSYILLSNIY 512
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 242/539 (44%), Gaps = 99/539 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M+ + + P +L L++ M G+ N T+ +L+S A+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA------------------ 197
+Q+HG ++K GF ++ + +SL+ Y + + DA
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 198 -------------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+++FD+I K+ VSWN ++ Y G KEA+ +F +M++ ++RP
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T+ L AC+ S G Q+H + F+ + ++ +L ++Y KCG +E A GL
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY +EA LF E
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQE----------------------------- 287
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + + VT+ +L CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 288 --MLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 345
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFE 481
KCG++ +A F M + SWNA++ G+A G+++ + FS M + P TF
Sbjct: 346 KCGDIEAAHQVFNSM-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFV 404
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC++ L+ G+ I + ++ +K + L
Sbjct: 405 GLLSACSHSGMLDLGRHIFRSMTQD----------------------------YKMTPKL 436
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ C +LG H+ +EA E+ M+ E PD + + +L AC GNV+LA F
Sbjct: 437 EHYGCMIDLLG--HSGLFKEAEEMINTMEME---PDGVIWCSLLKACKMHGNVELAESF 490
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 183/407 (44%), Gaps = 39/407 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y G++ A+ LFDE+P +D SWNAM+ Y + G LELF +M V ++
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
TY VL + A + + +Q+H + GF N+ + ++L+D Y KC + A +F
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ K+ +SWN ++ Y KEA+++F +MLR P + T + L AC+ L + G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 264 MQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
IH V I +G + SL +MY KCG +E A + + +++ SW +++ G+
Sbjct: 317 RWIH-VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 375
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A+ GR + +LF+ MRK + D +T
Sbjct: 376 AMHGRADASFDLFSR-------------------------------MRKIGIEPDDITFV 404
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L+ C+ + +G+ + + DY + + ++D+ G + A M
Sbjct: 405 GLLSACSHSGMLDLGRHIFRSM-TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME 463
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
D V W ++L G E A SF++ + P + LL+
Sbjct: 464 MEPDGVIWCSLLKACKMHGNVELA-ESFAQNLIKIEPENPSSYILLS 509
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 142/309 (45%), Gaps = 33/309 (10%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S Y + CA S +I R++ S + + ++N I+ Y KCG ++ A GLF
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +D SWN ++G YT L LF +M SG + N +T +VL + A + +
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316
Query: 163 KQLHGLIVKR--GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +H I KR G L +SL+D Y KC + A ++F+ + +K+ SWN ++ +
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+ G + +F +M + I P + TF L ACS + GM G I
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFVGLLSACS-----HSGMLDLGRHI--------- 422
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP-ER 339
S+T+ Y +LE ++D + G+ SG +EA E+ N M E
Sbjct: 423 -FRSMTQDYKMTPKLEHYGCMID-------------LLGH--SGLFKEAEEMINTMEMEP 466
Query: 340 NVISWNAML 348
+ + W ++L
Sbjct: 467 DGVIWCSLL 475
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/644 (29%), Positives = 331/644 (51%), Gaps = 44/644 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPP-------VFLLNRAIECYGKCGNLDDAR 97
YA L C+ +++ + R++ +LV + P L N I YG+C D AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FDEMP R+ SW +++ A+ QNG G L LF M SG +A+Q + +R+ E
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++G +Q+H +K ++I++++LV Y K ++ D +F+ I++K+ +SW I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 218 RYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ G EA+ +F +M+ E P F F +A AC + S G QIHG+ IK +
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V SL++MY +C L+ AR V+ Y I E
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSAR-----------------VAFYRI------------EA 317
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P+ ++SWN+++ Y+ L EAL MR + D +T+ +L C G + G+
Sbjct: 318 PD--LVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H ++ + ++ V N+LL MY +C +L SA F+++ + +D V+WN++LT A+
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEI-KDQDVVTWNSILTACAQH 434
Query: 457 GQSEEAMTSFSEMQWETRPS--KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
EE + FS + ++ PS + + +L+A A + E KQ+H + + + +
Sbjct: 435 NHPEEVLKLFSLLN-KSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRML 493
Query: 515 RGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L++ Y KC L+ A+R+F+ ++ DV +S+I+G+ +EA ++F M+ G
Sbjct: 494 SNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLG 553
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I+P+H+TF G+L AC G V ++ M +YGI+P EH C++ L R G + E
Sbjct: 554 IRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEA 613
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+F+++MPF P + M + + + + +G+ AA + ++P
Sbjct: 614 ANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 315/603 (52%), Gaps = 59/603 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC LD++ +F MP+++ SW+A++ QN F L++F +M GV +Q
Sbjct: 223 LDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQ 282
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+VL+S A +L + QLH +K F + I+ ++ +D Y KC M DA+R+FD
Sbjct: 283 SIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDM 342
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+N N S+N ++ Y NG A+++F K+ + + + + AL AC+ + EG
Sbjct: 343 SENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEG 402
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+HG+ K +F + V + +MY KC L+
Sbjct: 403 LQLHGLATKSNFSRNICVANAFIDMYGKCEALD--------------------------- 435
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F+EM ++ +SWNA++A + ++ + L+ + M ++ + D+ T G +L
Sbjct: 436 ----EACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVL 491
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-----RIWF---- 434
CAG S + G E+H I + +SN ++ ++L+DMY KCG + A +I+
Sbjct: 492 KACAGDS-LNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGD 550
Query: 435 --------------YQMSQRRDK---VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
+ RR + VSWNA+++GY R QSE+A F+ M + P
Sbjct: 551 SNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPD 610
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
KFT+ T+L CAN++S+ GKQIH VI+ + +V LV++Y+KC L + +F+
Sbjct: 611 KFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFE 670
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
++ D + N+MI G+ H+ G EA+++F M I P+H TF +L AC H G V+
Sbjct: 671 KAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVER 730
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
L +F M+ +YG+ P+LEHY M+ + + G +++ + + MPF + R + C
Sbjct: 731 GLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSAC 790
Query: 657 RKN 659
+ N
Sbjct: 791 KIN 793
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 244/467 (52%), Gaps = 25/467 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
VS S+YA + + CA+ + +L ++ + + ++ Y KC N+ DA+ L
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339
Query: 100 FDEMPERDGGSWNAMLGAYTQ--NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
FD + S+NAM+ Y+Q NGF R L LF ++ S + ++I+ + LR+ A
Sbjct: 340 FDMSENLNLQSYNAMITGYSQKDNGF--RALLLFRKLSKSSLGFDEISLSGALRACATVK 397
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L QLHGL K F N+ + ++ +D YGKC + +A R+FD++ K+AVSWN I+
Sbjct: 398 GLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIA 457
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ + + + MLR + P +TF + L AC+ S GM+IH I+K+
Sbjct: 458 AHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMAS 516
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE-- 335
+ + SL +MY KCG +++A + ++ I G S E E E
Sbjct: 517 NPYIGSSLVDMYSKCGMIDEAEKIHNK-----------IFIGIGDSNTYSEHPETIEEPK 565
Query: 336 -MPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+ +R V +SWNA+++GY ++A F M + D+ T +L+ CA L+
Sbjct: 566 GIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLA 625
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
I +GK++H + + + ++++ + L+DMY KCGNL +R+ F + + RD V+WNA++
Sbjct: 626 SIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMF-EKAPIRDFVTWNAMI 684
Query: 451 TGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
GYA G EEA+ F M P+ TF +LL ACA++ +E+G
Sbjct: 685 CGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERG 731
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 288/621 (46%), Gaps = 96/621 (15%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
S + ++ +F+ CA +A ++ ++++ P VF+ N ++ Y CGNL A L
Sbjct: 47 TSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKL 106
Query: 100 FDEMP-------------------------------ERDGGSWNAMLGAYTQNGFPGRTL 128
FD MP RD SWN+ML + Q G ++
Sbjct: 107 FDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESV 166
Query: 129 ELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
++F++M SGV + +++ +L+ S E +LG Q+HG+ ++ G+ +V+ S+L+D
Sbjct: 167 KVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGT--QIHGIALRMGYDTDVVSGSALLD 224
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + ++ +F + KN +SW+ I+ + + MF +M + +
Sbjct: 225 MYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSI 284
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
+A+ L +C+ L G Q+H +K DF D +V + +MY KC ++DA+ L D +
Sbjct: 285 YASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSE 344
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
N+ S+ ++++GY+ G+ LL+++
Sbjct: 345 NLNLQSYNAMITGYSQKDN------------------------GFRALLLFRK------- 373
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+ K++ D+++L L CA + + G ++HG ++++S NI V+NA +DMY KC
Sbjct: 374 LSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEA 433
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLLA 485
L A F +M R+D VSWNA++ + + + + + S ++ P ++TF ++L
Sbjct: 434 LDEACRVFDEMG-RKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLK 492
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV----------- 534
ACA SL G +IH +++ N +LV++Y+KC ++ A ++
Sbjct: 493 ACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDS 551
Query: 535 ---------FKESSSLD-------VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+E + ++ N++I G+ ++ +A F M + GI PD
Sbjct: 552 NTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDK 611
Query: 579 ITFHGILLACIHEGNVKLALQ 599
T+ +L C + ++ L Q
Sbjct: 612 FTYSTVLDTCANLASIGLGKQ 632
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/558 (24%), Positives = 251/558 (44%), Gaps = 71/558 (12%)
Query: 119 TQNGFPGRTLELF----LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
T+N P R + +F +NH + + ++ V + A++ + KQ H ++ GF
Sbjct: 22 TKN-IPYRRVRIFSISTASVNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGF 80
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY--------------- 219
V + + L+ Y C + A ++FD + ++ VSWN ++ Y
Sbjct: 81 RPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEM 140
Query: 220 ----------------LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
L G E+V +F +M R + N +F+ L CS L + G
Sbjct: 141 MPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLG 200
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QIHG+ +++ ++ D V +L +MY KC
Sbjct: 201 TQIHGIALRMGYDTDVVSGSALLDMYAKCK------------------------------ 230
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
R+ E+ +F MP++N ISW+A++AG ++ L M+K + Q +L
Sbjct: 231 -RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVL 289
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA L ++++G ++H ++D+ + V A LDMY KC N++ A+ F MS+ +
Sbjct: 290 KSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLF-DMSENLNL 348
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCF 502
S+NA++TGY+++ A+ F ++ + + + L ACA + L +G Q+H
Sbjct: 349 QSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGL 408
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++ + N+ A +++Y KC L+ A RVF E D + N++I NE +
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L + M + G++PD TF +L AC + ++ ++ ++ K G+ ++
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACAGD-SLNHGMEIHTTI-VKLGMASNPYIGSSLVD 526
Query: 623 LYCRYGYMKELEDFVNRM 640
+Y + G + E E N++
Sbjct: 527 MYSKCGMIDEAEKIHNKI 544
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 202/428 (47%), Gaps = 58/428 (13%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA+ K + E +L + + + N I+ YGKC LD+A +FDEM +D SW
Sbjct: 393 CATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSW 452
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA++ A+ QN +TL + + M SG+ ++ T+ +VL++ A + L ++H IVK
Sbjct: 453 NAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGD-SLNHGMEIHTTIVK 511
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-----------------------QNKN 208
G N + SSLVD Y KC ++ +A ++ + I Q++
Sbjct: 512 LGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRR 571
Query: 209 A----VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
VSWN I+ Y++ ++A F +M+ I P FT++ L C+ L+S G
Sbjct: 572 VQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGK 631
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QIH +IK + + D + +L +MY KCG L D+R + ++ R+ ++W +++ GYA G
Sbjct: 632 QIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHG 691
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
EA +LF M N++ +A FV L+R +GL+
Sbjct: 692 MGEEAIKLFESMVLMNIMPNHAT---------------FVSLLRACAH------MGLVER 730
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
GL M K+ +G R ++ SN ++D+ K G + A +M D V
Sbjct: 731 ---GLDYFHMMKKEYGLDPRLEHYSN------MVDILGKSGEVEKALELIQEMPFEADDV 781
Query: 445 SWNAVLTG 452
W +L+
Sbjct: 782 IWRTLLSA 789
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 158/342 (46%), Gaps = 33/342 (9%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
I++ SKTL +S EP Y+ + + + CA ++ ++ + +V
Sbjct: 455 IIAAHEQNEERSKTLNILVSMLRSGMEPDEYT-FGSVLKACAGD-SLNHGMEIHTTIVKL 512
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGL-------------FDEMPE---RDGG------ 109
++ + ++ Y KCG +D+A + + E PE G
Sbjct: 513 GMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRV 572
Query: 110 -----SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
SWNA++ Y F M G++ ++ TY+ VL + A +G+ KQ
Sbjct: 573 QEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQ 632
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++K+ +V + S+LVD Y KC + D+R MF+ ++ V+WN ++ Y G
Sbjct: 633 IHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGM 692
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--L 282
G+EA+ +F M+ +I P + TF + L AC+ + G+ + ++K ++ D +
Sbjct: 693 GEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLD-YFHMMKKEYGLDPRLEHY 751
Query: 283 GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAIS 323
++ ++ K G +E A L+ + P E + + W +++S I+
Sbjct: 752 SNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKIN 793
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/596 (30%), Positives = 307/596 (51%), Gaps = 34/596 (5%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
++ LFDE P++ N +L +++N L LFL + SG + + + VL+
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ V KQ+H +K GF +V + +SLVD Y K + D R+FD+++ KN VSW +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y G ++A+ +F +M E I+P FTFA L + + +G+Q+H ++IK
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ V S+ MY K S + +A+ +F+
Sbjct: 225 DSTIFVGNSMVNMYSK-------------------------------SLMVSDAKAVFDS 253
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M RN +SWN+M+AG+ + L EA + + MR + Q ++ +CA + E+
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K++H + +N ++ + AL+ Y KC + A F M ++ VSW A+++GY +
Sbjct: 314 KQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQ 373
Query: 456 RGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACAN-ISSLEQGKQIHCFVIRNCYEINV 512
G+++ AM F +M+ E P++FTF ++L ACA +S+EQGKQ H I++ + +
Sbjct: 374 NGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNAL 433
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
ALV +Y K +E A VFK D++ NSMI G+ + G+++L++F M+ +
Sbjct: 434 CVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSK 493
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
++ D ITF G++ AC H G V ++FD M Y I+P +EHY CM+ LY R G +++
Sbjct: 494 NLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEK 553
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
D +N+MPF + R + CR + LGE AA +L L P + + +N
Sbjct: 554 AMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSN 609
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 251/505 (49%), Gaps = 35/505 (6%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
G +S P S + + ++C + +++ + V + ++ Y K
Sbjct: 82 GLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTE 141
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+++D +FDEM ++ SW ++L Y QNG + L+LF M G+ N T+A VL
Sbjct: 142 SVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLG 201
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
A + + Q+H +++K G + + +S+V+ Y K ++++DA+ +FD ++N+NAVS
Sbjct: 202 GLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS 261
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ ++ G EA +F++M E ++ FA + C+ + Q+H +I
Sbjct: 262 WNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVI 321
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREAR 330
K + D + +L Y KC ++DA L +N++SWT+I+SGY +GR A
Sbjct: 322 KNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAM 381
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG-L 389
LF +M R+ + ++ T +LN CA
Sbjct: 382 NLFCQM------------------------------RREEGVEPNEFTFSSVLNACAAPT 411
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ ++ GK+ H ++ +S+ + VS+AL+ MY K GN+ SA F + RD VSWN++
Sbjct: 412 ASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD-RDLVSWNSM 470
Query: 450 LTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++GYA+ G ++++ F EM+ + TF +++AC + + +G++ ++++ +
Sbjct: 471 ISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYH 530
Query: 509 EINVVCR-GALVEVYTKCCCLEYAI 532
+ + +V++Y++ LE A+
Sbjct: 531 IVPTMEHYSCMVDLYSRAGMLEKAM 555
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVE-ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
EP ++ ++ + CA+ A VE ++ S + + + + + + Y K GN++ A
Sbjct: 394 EPNEFT-FSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESA 452
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F +RD SWN+M+ Y Q+G ++L++F +M + + IT+ V+ +
Sbjct: 453 NEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHA 512
Query: 157 LELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ ++ L+VK + S +VD Y + ++ A D+ NK
Sbjct: 513 GLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAM----DLINKMPFPAGAT 568
Query: 216 VRRYLVAG 223
+ R L+A
Sbjct: 569 IWRTLLAA 576
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/487 (34%), Positives = 276/487 (56%), Gaps = 4/487 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P +TF L +C+
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ ++ D V SL MYV+ GRLEDAR + DQ R+++S+T++
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GYA G I A++LF+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 161 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 220
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I + + SN+ + NAL+D+Y KCG + +A F
Sbjct: 221 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEG 280
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S +D +SWN ++ GY +EA+ F EM + P+ T ++L ACA++ +++
Sbjct: 281 LS-YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDI 339
Query: 496 GKQIHCFVIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + +L+++Y KC +E A +VF + + N+MI GF
Sbjct: 340 GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 399
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ + A ++F M+K GI PD ITF G+L AC H G + L F SM Y I P+
Sbjct: 400 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK 459
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE ++ + MP P + + C+ + LGE A+ L
Sbjct: 460 LEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLI 519
Query: 674 ELNPWAP 680
++ P P
Sbjct: 520 KIEPETP 526
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 205/440 (46%), Gaps = 70/440 (15%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P L L++ M G+ N T+ +L+S A+
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR----------------- 198
+Q+HG ++K G+ ++ + +SL+ Y + + DAR
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 199 --------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++FD+I K+ VSWN ++ Y GN KEA+ +F M++ ++RP
Sbjct: 161 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 220
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + AC+ S G Q+H I F + ++ +L ++Y KCG +E A GL +
Sbjct: 221 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEG 280
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY +EA LF E
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQE----------------------------- 311
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN----DYSSNIFVSNALLDM 420
M ++ + + VT+ IL CA L I +G+ +H +I++ +S++ S L+DM
Sbjct: 312 --MLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS--LIDM 367
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
Y KCG++ +A+ F M R SWNA++ G+A G++ A FS+M+ P T
Sbjct: 368 YAKCGDIEAAKQVFDSM-LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDIT 426
Query: 480 FETLLAACANISSLEQGKQI 499
F LL+AC++ L+ G+ I
Sbjct: 427 FVGLLSACSHSGMLDLGRHI 446
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 208/472 (44%), Gaps = 87/472 (18%)
Query: 32 GHLKSDEPVSYSLYAH-----------------LFQLCASSKAIVEARKLESNLVTFYPT 74
GH S +PVS +LY + L + CA SKA E +++ +++
Sbjct: 62 GHALSSDPVS-ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 75 PPVFLLNRAIECYGKCGNLDDARG-------------------------------LFDEM 103
+++ I Y + G L+DAR LFDE+
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEI 180
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P +D SWNAM+ Y + G LELF DM + V ++ T V+ + A+ + + +
Sbjct: 181 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 240
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H I GF N+ + ++L+D Y KC + A +F+ + K+ +SWN ++ Y
Sbjct: 241 QVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN 300
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDV 280
KEA+++F +MLR P + T + L AC+ L + G IH V I +G
Sbjct: 301 LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIH-VYINKRLKGVTNASS 359
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+L SL +MY KCG +E A+ + D R++ SW +++ G+A+ G+ A +LF++
Sbjct: 360 LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSK----- 414
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
MRK D D +T +L+ C+ + +G+ +
Sbjct: 415 --------------------------MRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR 448
Query: 401 FIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ + DY + + ++D+ CG + A+ M D V W ++L
Sbjct: 449 SMSQ-DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 499
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 316/615 (51%), Gaps = 34/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N ++ Y + G L AR +FDEMP RD SWN+++ Y+ +G+ LE++ ++ +
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S + + T ++VL + L + + LHG +K G V++ + LV Y K TD
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD++ +++VS+N ++ YL +E+V MF + L + +P T ++ L AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L I+ ++K F + V L ++Y KCG ++I+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG---------------DMIT---- 360
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
AR++FN M ++ +SWN++++GY +S EA+ +M + D
Sbjct: 361 ------------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T ++++V L+++K GK +H ++ ++ VSNAL+DMY KCG + + F
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
M D V+WN V++ R G + ++M + E P TF L CA++++
Sbjct: 469 MGTG-DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IHC ++R YE + AL+E+Y+KC CLE + RVF+ S DV+ MI +
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
G +ALE F M+K GI PD + F I+ AC H G V L F+ M+ Y I P +E
Sbjct: 588 YGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIE 647
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R + + E+F+ MP P + + CR +G E +RR+ EL
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 676 NPWAPFQFKITTNRF 690
NP P + +N +
Sbjct: 708 NPDDPGYSILASNAY 722
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 281/590 (47%), Gaps = 36/590 (6%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM-PERDGGSW 111
+SS + E R++ + +++ F + I+ Y + +F + P ++ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N+++ A+++NG LE + + S VS ++ T+ +V+++ A + + ++ I+
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF ++ + ++LVD Y + ++T AR++FD++ ++ VSWN ++ Y G +EA+ +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ ++ I P +FT ++ L A L +G +HG +K VV L MY+K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
R DAR + D+ D R+ +S+ +++ GY L EM E +V
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGY-----------LKLEMVEESV---------- 293
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+FL D +T+ +L C L ++ + K ++ ++ + +
Sbjct: 294 -----------RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ- 470
V N L+D+Y KCG++ +AR F M + +D VSWN++++GY + G EAM F M
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E + T+ L++ ++ L+ GK +H I++ I++ AL+++Y KC +
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
++++F + D + N++I L+V M+K + PD TF L C
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L + + ++G +L+ +I++Y + G ++ RM
Sbjct: 522 LAAKRLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 228/501 (45%), Gaps = 37/501 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ- 205
+ L SS+ EL +++H L++ G + L+D Y + +F +
Sbjct: 11 SRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
KN WN I+R + G EA+ + K+ + P +TF + + AC+ L G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ I+ + FE D V +L +MY + G L
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLT----------------------------- 158
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
AR++F+EMP R+++SWN++++GY+ ++EAL+ ++ + D T+ +L
Sbjct: 159 --RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
L +K G+ +HGF ++ +S + V+N L+ MY K AR F +M RD VS
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV-RDSVS 275
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+N ++ GY + EE++ F E + +P T ++L AC ++ L K I+ ++++
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ + R L++VY KC + A VF D + NS+I G+ + EA+++
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F +M + DHIT+ ++ ++K + S K GI L +I +Y
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYA 454
Query: 626 RYGYMKELEDFVNRMPFNPTV 646
+ G + + + M TV
Sbjct: 455 KCGEVGDSLKIFSSMGTGDTV 475
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%), Gaps = 24/335 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KCG + D+ +F M D +WN ++ A + G L++ M S V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T+ L A + K++H +++ G+ + + ++L++ Y KC + ++ R+
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+ + ++ V+W ++ Y + G G++A+ F M + I P + F ++ACS
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 261 YEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIV 317
EG+ + K ++ D ++ + ++ + ++ A + P + + W S++
Sbjct: 627 DEGLACFEKM-KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL------DFVFLMRKTT 371
SG + A E R +I N GY S+L A D V L+RK+
Sbjct: 686 RACRTSGDMETA-----ERVSRRIIELNPDDPGY--SILASNAYAALRKWDKVSLIRKSL 738
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
KD +T G S I++GK VH F +D
Sbjct: 739 KD-KHITKN------PGYSWIEVGKNVHVFSSGDD 766
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
+CAS A +++ L+ F + + N IE Y KCG L+++ +F+ M RD +
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
W M+ AY G + LE F DM SG+ + + + ++
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+TR S L++ +N++ L ++IH VI + + G L++ Y+ +
Sbjct: 2 QTRVSSPFISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASS 58
Query: 532 IRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
+ VF+ S + +V + NS+I F N EALE +G +++ + PD TF ++ AC
Sbjct: 59 LSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
+ ++ ++ + G L ++ +Y R G + + MP V
Sbjct: 119 LFDAEMGDLVYEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 651 KIFDKCRKNGYATLG--EWAARRLNEL-NPW-APFQFKITT 687
I +GY++ G E A +EL N W P F +++
Sbjct: 178 LI------SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 322/637 (50%), Gaps = 37/637 (5%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+Y L Q C + + L ++ +F N + Y K +L DA LFDEM
Sbjct: 46 IYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEM 105
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGV 161
P+R+ S+ ++ Y+Q + LF + G N ++ VL+ SAE +LG
Sbjct: 106 PDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGF 165
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
S +H + K GF + + ++L+D Y C AR++FD I+ K+ VSW +V Y+
Sbjct: 166 S--VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVE 223
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+E++ +F +M +P NFTFA+ L AC L G +HG K + + V
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L ++Y+K G ++DA ++F EMP+ +V
Sbjct: 284 GVELIDLYIKSGDVDDAL-------------------------------QVFEEMPKDDV 312
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
I W+ M+A Y +S +EA++ MR+ +Q TL +L CA L ++++G ++H
Sbjct: 313 IPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCH 372
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + N+FVSNAL+DMY KCG + ++ F + D VSWN V+ GY + G E+
Sbjct: 373 VVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGEK 431
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F +M + + + ++ T+ ++L ACA I++LE G QIH ++ Y+ N V AL++
Sbjct: 432 ALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALID 491
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC ++ A VF D + N+MI G+ + EAL+ F M + KPD +T
Sbjct: 492 MYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVT 551
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F GIL AC + G + +F SM +Y I P EHY CM+ L R G++ + V+ +
Sbjct: 552 FVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEI 611
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
PF P+V + R + C + LG +A+R+ E+ P
Sbjct: 612 PFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEP 648
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 229/478 (47%), Gaps = 39/478 (8%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N L TQ F + +HS N Y ++L+S + K LH I+K
Sbjct: 19 NTALCIITQRSFLAQR------TSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIK 72
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+G C ++ + L++ Y K + DA ++FD++ ++N VS+ +++ Y EA+ +
Sbjct: 73 KGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGL 132
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F ++ E F F+ L G +H + K+ F+ D V +L + Y
Sbjct: 133 FSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSV 192
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG E AR + D + ++++SWT +V+ Y + E+ +LF+ M + G+
Sbjct: 193 CGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRM----------RIVGF 242
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ T +L C GL +GK VHG + Y +
Sbjct: 243 KP---------------------NNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
FV L+D+Y K G++ A F +M + D + W+ ++ YA+ QSEEA+ F M+
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMP-KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
P++FT +LL ACA++ L+ G QIHC V++ ++NV AL+++Y KC +E
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
++++F ES + + N++I+G+ G +AL +F M + ++ +T+ +L AC
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRAC 458
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 329/647 (50%), Gaps = 34/647 (5%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
H S P ++L ++ + CA+ A+ R + +++ + I+ Y G
Sbjct: 138 AHPSSPRPDGHTL-PYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAG 196
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
LD AR +FD M ERD WN M+ Y + G + LF M SG N T A L
Sbjct: 197 LLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLS 256
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
A E +L QLH L VK G V + ++LV Y KC + +A R+F + + V+
Sbjct: 257 VCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVT 316
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ + G +A+ +F M + ++P + T A+ L A + L+ +G +IHG I+
Sbjct: 317 WNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIV 376
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ D ++ +L ++Y KC + A+ + D +++ ++++SGY
Sbjct: 377 RNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGY----------- 425
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ N M E V + +LA + + V + L CA ++
Sbjct: 426 VLNRMSEAAVKMFRYLLALGIKP--------------------NAVMVASTLPACASMAA 465
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+++G+E+HG++ +N Y +V +AL+DMY KCG L + F +MS + D+V+WN++++
Sbjct: 466 MRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMIS 524
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+A+ G+ EEA+ F +M E + + T ++L+ACA + ++ GK+IH +I+
Sbjct: 525 SFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRA 584
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ AL+++Y KC LE A+RVF+ + + NS+I + + +E++++ M+
Sbjct: 585 DLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQ 644
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG K DH+TF ++ AC H G V+ L+ F M +Y I PQ+EH CM+ LY R G +
Sbjct: 645 EEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKL 704
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ F+ MPF P + + CR + L E A++ L +L+P
Sbjct: 705 DKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDP 751
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 174/672 (25%), Positives = 297/672 (44%), Gaps = 87/672 (12%)
Query: 15 KSSPKPTPSKTLTKTISGHLKSD---EPVSYSLYAHLFQLCASSKAI-----VEARKLES 66
+ S KP P K L+ S S P +Y L A L + C + + + AR + S
Sbjct: 7 RRSFKPPPRKWLSAAFSETASSATNASPCAYRLLA-LLRGCVAPSHLPLGLRIHARAVTS 65
Query: 67 NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG---SWNAMLGAYTQNGF 123
L+ P L R + Y DA +F +P WN ++ +T G
Sbjct: 66 GLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGH 125
Query: 124 PGRTLELFLDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
+ ++ M + S + T V++S A L + + +H G ++ +
Sbjct: 126 HRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVG 185
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S+L+ Y ++ AR +FD + ++ V WNV++ Y+ AG+ AV +F M
Sbjct: 186 SALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCD 245
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P T A L C+ + G+Q+H + +K E + V +L MY KC LE+A L
Sbjct: 246 PNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRL 305
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
++++W ++SG +G + +A LF +
Sbjct: 306 FGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCD-------------------------- 339
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
M+K+ D VTL +L L+ K GKE+HG+I RN ++F+ +AL+D+Y
Sbjct: 340 -----MQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIY 394
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTF 480
KC ++R A+ F ++ D V + +++GY SE A+ F + +P+
Sbjct: 395 FKCRDVRMAQNVF-DATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+ L ACA+++++ G+++H +V++N YE AL+++Y+KC L+ + +F + S+
Sbjct: 454 ASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSA 513
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------I 589
D + NSMI F N EAL++F M EG+K +++T IL AC I
Sbjct: 514 KDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEI 573
Query: 590 HE------------------------GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
H GN++LAL+ F+ M K + + +I Y
Sbjct: 574 HGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEV-----SWNSIISAYG 628
Query: 626 RYGYMKELEDFV 637
+G +KE D +
Sbjct: 629 AHGLVKESVDLL 640
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 302/595 (50%), Gaps = 33/595 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC LDD+ +F E+P ++ W+A++ QN LELF +M G+ +Q
Sbjct: 218 LDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQ 277
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+V RS A L V QLH +K F ++ + ++ +D Y KC + DA+R+F+
Sbjct: 278 SIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNS 337
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ + +N I+ + G EA+ F +L+ + + + A AC+ + +G
Sbjct: 338 LPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDG 397
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+H + +K + V S+ +MY KC L
Sbjct: 398 RQLHSLSVKSTLRSNICVANSILDMYGKCEALS--------------------------- 430
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F+EM R+ +SWNA++A + ++ +E L+ M + + DQ T G +L
Sbjct: 431 ----EACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVL 486
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C+ + G E+H I ++ + FV AL+DMY KCG + A+ ++ Q+
Sbjct: 487 KACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT-M 545
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA++ G+ SE+A + F EM + +P FT+ +L ACAN++S+ GKQIH
Sbjct: 546 VSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQ 605
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+I+ +V LV++Y+KC ++ + VF+++ + D + N+MI G+ + G EA
Sbjct: 606 IIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEA 665
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L F M+ E ++P+H TF IL AC H G + L +F++M +YG+ PQ+EHY CMI
Sbjct: 666 LGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMID 725
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R G + E + MPF + R + C+ +G + E A + +L P
Sbjct: 726 IIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEP 780
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 176/643 (27%), Positives = 316/643 (49%), Gaps = 80/643 (12%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++H+ Q C+ ++ ++ + ++ P V++ N ++ Y +C +L+ A
Sbjct: 40 PTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYK 99
Query: 99 LFDEM-------------------------------PERDGGSWNAMLGAYTQNGFPGRT 127
+F++M P+RD SWN+ML + QNG ++
Sbjct: 100 VFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKS 159
Query: 128 LELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
+++FLDM S V +Q T+A VL++ + + G+ Q+HGLIV+ GF +V+ S+L+D
Sbjct: 160 IDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLD 219
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + D+ ++F +I KN V W+ I+ + + +F +M + I
Sbjct: 220 MYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSI 279
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT-EMYVKCGRLEDARGLLDQP 305
+A+ +C+ LS+ G Q+H +K DF G D+ +G+ T +MY KCG L D
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDF-GSDITVGTATLDMYAKCGSLAD-------- 330
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
A+ +FN +P+ ++ +NA++ G R+ EAL F
Sbjct: 331 -----------------------AQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQ 367
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
L+ K+ ++++L + CA + G+++H ++ SNI V+N++LDMY KC
Sbjct: 368 LLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCE 427
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLL 484
L A F +M +RRD VSWNAV+ + + G EE + F+ M + P +FT+ ++L
Sbjct: 428 ALSEACCMFDEM-ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVL 486
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
AC++ +L G +IH +I++ ++ GAL+++Y KC +E A ++ ++
Sbjct: 487 KACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMV 546
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N++I GF + +A F M K +KPD+ T+ +L AC + +V L Q
Sbjct: 547 SWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQI---- 602
Query: 605 RCKYGIIPQLEHY------ECMIKLYCRYGYMKELEDFVNRMP 641
+G I +LE + ++ +Y + G M++ + P
Sbjct: 603 ---HGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 229/479 (47%), Gaps = 61/479 (12%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F CAS K ++ R+L S V + + N ++ YGKC L +A +FDEM RD
Sbjct: 385 FSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDA 444
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWNA++ A+ QNG TL LF M + +Q TY +VL++ + + L ++H
Sbjct: 445 VSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNR 504
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
I+K G + + +L+D Y KC ++ +A+++ D I+ + VSWN I+ + + + ++A
Sbjct: 505 IIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDA 564
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
F++ML+ ++P NFT+A L AC+ L+S G QIHG IIK++ D + +L +M
Sbjct: 565 HSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDM 624
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV------- 341
Y KCG ++D+ + ++ ++ ++W +++ GYA G EA F M NV
Sbjct: 625 YSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATF 684
Query: 342 IS-----------------WNAMLAGY----------------TRSLLWKEALDFVFLMR 368
+S +NAML Y RS EAL L++
Sbjct: 685 VSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALK---LIQ 741
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR---NDYSSNIFVSNALLD--MYRK 423
+ + D V +L++C I++ ++ I + D S+ I +SN D M+ K
Sbjct: 742 EMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGK 801
Query: 424 CGNLRSARIWFYQMSQRRDKVSW-------NAVLTGYARRGQSEEAMTSFS----EMQW 471
+R ++ Y ++ SW +A L G + EE S EM+W
Sbjct: 802 VSEMR--KMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKW 858
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 248/555 (44%), Gaps = 73/555 (13%)
Query: 126 RTLELF-------LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+TL +F L N + + T++++++ ++ L KQ H ++ GF +V
Sbjct: 19 KTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDV 78
Query: 179 ILESSLVDAYGKCMVMTDARRMFD-------------------------------DIQNK 207
+ + L+ Y +C + A ++F+ D +
Sbjct: 79 YISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKR 138
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQI 266
+ VSWN ++ +L G ++++ +F M R E++ TFA L ACS L G+Q+
Sbjct: 139 DVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQV 198
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+I+++ F D V +L +MY KC RL+D+ + + +N + W++I++G +
Sbjct: 199 HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEH 258
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
ELF E M+K + Q + C
Sbjct: 259 ILGLELFKE-------------------------------MQKVGIGVSQSIYASVFRSC 287
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
AGLS +K+G ++H + D+ S+I V A LDMY KCG+L A+ F + + + +
Sbjct: 288 AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQC-Y 346
Query: 447 NAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
NA++ G R + EA+ F ++ ++ + +ACA+I G+Q+H ++
Sbjct: 347 NAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVK 406
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ N+ +++++Y KC L A +F E D + N++I N E L +
Sbjct: 407 STLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNL 466
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M + ++PD T+ +L AC + + ++ + + K G+ +I +YC
Sbjct: 467 FASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRI-IKSGLGLDSFVGGALIDMYC 525
Query: 626 RYGYMKELEDFVNRM 640
+ G ++E + +R+
Sbjct: 526 KCGMIEEAKKIHDRI 540
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 21/375 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP ++ Y + + C+S +A+ ++ + ++ F+ I+ Y KCG +++A+
Sbjct: 476 EPDQFT-YGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAK 534
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ D + ++ SWNA++ +T F +M V + TYA VL + A
Sbjct: 535 KIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLA 594
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+G+ KQ+HG I+K +V + S+LVD Y KC M D+ +F+ NK+ V+WN ++
Sbjct: 595 SVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMIC 654
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFE 276
Y G G+EA+ F +M E++RP + TF + L AC+ + +G+ + ++ + E
Sbjct: 655 GYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLE 714
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNE 335
+ ++ + GR+ +A L+ + P E + + W +++S I G I A + N
Sbjct: 715 PQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNA 774
Query: 336 M----PERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+ PE + S +L+ Y + +W + + +MR L G S
Sbjct: 775 ILQLEPEDS--SACILLSNIYADAGMWGKVSEMRKMMRYNK-----------LKKEPGCS 821
Query: 391 EIKMGKEVHGFIHRN 405
I++ EVH F+ N
Sbjct: 822 WIEVKDEVHAFLVGN 836
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 331/644 (51%), Gaps = 44/644 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPP-------VFLLNRAIECYGKCGNLDDAR 97
YA L C+ +++ + R++ +LV + P L N I YG+C D AR
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FDEMP R+ SW +++ A+ QNG G L LF M SG +A+Q + +R+ E
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++G +Q+H +K ++I++++LV Y K ++ D +F+ I++K+ +SW I+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 218 RYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ G EA+ +F KM+ E P F F +A AC + S G QIHG+ IK +
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V SL++MY + L+ AR V+ Y I E
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSAR-----------------VAFYRI------------EA 317
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P+ ++SWN+++ Y+ L EAL MR + D +T+ +L C G + G+
Sbjct: 318 PD--LVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H ++ + ++ V N+LL MY +C +L SA F+++ + +D V+WN++LT A+
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEI-KDQDVVTWNSILTACAQH 434
Query: 457 GQSEEAMTSFSEMQWETRPS--KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
EE + FS + ++ PS + + +L+A A + E KQ+H + + + +
Sbjct: 435 NHPEEVLKLFSLLN-KSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRML 493
Query: 515 RGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L++ Y KC L+ A+R+F+ ++ DV +S+I+G+ +EAL++F M+ G
Sbjct: 494 SNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLG 553
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I+P+H+TF G+L AC G V ++ M +YGI+P EH C++ L R G + E
Sbjct: 554 IRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEA 613
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+F+++MPF P + M + + + + +G+ AA + ++P
Sbjct: 614 ANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 189/635 (29%), Positives = 320/635 (50%), Gaps = 36/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QLCA K++ + +++ S +++ + L + + Y CG+L R +FD++
Sbjct: 97 YCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIM 156
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
WN ++ Y + G ++ LF M GV N T+ VL+ A ++ K+
Sbjct: 157 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 216
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++K GF N + +SL+ AY K + A +FD++ + VSWN ++ +V G
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ +F +ML + T + L AC+ + + G +HG +K F + V +
Sbjct: 277 SGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNT 336
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG L A E+F +M + ++SW
Sbjct: 337 LLDMYSKCGNLNGAT-------------------------------EVFVKMGDTTIVSW 365
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+++A Y R L+ +A+ M+ D T+ I++ CA S + G++VH ++ +
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N SN+ V+NAL++MY KCG++ AR+ F ++ + D VSWN ++ GY++ EA+
Sbjct: 426 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNLLPNEALE 484
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVY 522
F +MQ + +P T +L ACA +++L++G++IH ++R Y +++V C ALV++Y
Sbjct: 485 LFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC--ALVDMY 542
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L A +F D+I MI G+ + G EA+ F M+ GI+PD +F
Sbjct: 543 AKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFS 602
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
IL AC H G + +FF+SMR + G+ P+LEHY C++ L R G + + F+ MP
Sbjct: 603 AILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPI 662
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR + L E A + EL P
Sbjct: 663 KPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 697
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 237/478 (49%), Gaps = 36/478 (7%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA + + + G +EL + N +Y +VL+ AE+ L K++H +I+
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + L + LV Y C + R++FD I N WN+++ Y GN +E+V +
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F KM + + +TF L + L E ++HG ++K+ F + V+ SL Y K
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
G +E A L D+ E +++SW S+++G ++G E+F +M ++ G
Sbjct: 243 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM----------LILGV 292
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++D TL +L CA + + +G+ +HGF + +S +
Sbjct: 293 ---------------------EVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEV 331
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
SN LLDMY KCGNL A F +M VSW +++ Y R G +A+ F EMQ
Sbjct: 332 VFSNTLLDMYSKCGNLNGATEVFVKMGDTT-IVSWTSIIAAYVREGLYSDAIGLFDEMQS 390
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+ RP +T +++ ACA SSL++G+ +H +VI+N N+ AL+ +Y KC +E
Sbjct: 391 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 450
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A VF + D++ N+MI G+ N EALE+F M+K+ KPD IT +L AC
Sbjct: 451 ARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPAC 507
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 196/443 (44%), Gaps = 41/443 (9%)
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
QN+NA + ++ G+ + A+ + K ++ LN ++ + L C+ S +G
Sbjct: 62 QNQNAK-----INKFCEMGDLRNAIELLTKSKSYEL-GLN-SYCSVLQLCAEKKSLEDGK 114
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++H VII D+ + L MYV CG L R + D+ + W ++S YA G
Sbjct: 115 RVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIG 174
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
RE+ LF +M + V+ + T +L
Sbjct: 175 NFRESVSLFKKMQKLGVVG-------------------------------NCYTFTCVLK 203
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
A L ++K K VHG++ + + SN V N+L+ Y K G + SA F ++S+ D V
Sbjct: 204 CFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVV 262
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWN+++ G G S + F +M T ++L ACANI +L G+ +H F
Sbjct: 263 SWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFG 322
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ C+ VV L+++Y+KC L A VF + ++ S+I + +A+
Sbjct: 323 VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAI 382
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F M+ +G++PD T I+ AC ++ S K G+ L +I +
Sbjct: 383 GLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD-VHSYVIKNGMGSNLPVTNALINM 441
Query: 624 YCRYGYMKELEDFVNRMPFNPTV 646
Y + G ++E +++P V
Sbjct: 442 YAKCGSVEEARLVFSKIPVKDIV 464
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 280/515 (54%), Gaps = 9/515 (1%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ A ++ D R+F + ++AVS+N ++ + AG A + +L
Sbjct: 75 NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134
Query: 237 RED-------IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
RE+ +RP T + + A S L G Q+H I+++ F L +MY
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
K G + DA+ + D+ +N++ + ++++G + EAR +F M +R+ I+W M+
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
G T++ L EALD MR IDQ T G IL C L+ + GK++H + R Y
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
NIFV +AL+DMY KC ++R A F +M+ + + +SW A++ GY + G EEA+ FSEM
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTCK-NIISWTAMIVGYGQNGCGEEAVRVFSEM 373
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
Q + +P+ FT +++++CAN++SLE+G Q HC + + + ALV +Y KC +
Sbjct: 374 QTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSI 433
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
E A R+F E D + +++ G+ + +E +++F M +G+KP+ +TF G+L AC
Sbjct: 434 EDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSAC 493
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
G V+ +F SM+ +GI+ +HY CMI LY R G +KE E+F+ +MP P
Sbjct: 494 SRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIG 553
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
+ CR G +G+WAA L + +P P +
Sbjct: 554 WATLLSACRLRGDMEIGKWAAENLLKTDPQNPASY 588
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 204/424 (48%), Gaps = 45/424 (10%)
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
VL L Y + GRL AR L D + N+ + +++S A + + + LF MP+R+
Sbjct: 47 VLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRD 106
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID-------QVTLGLILNVCAGLSEIK 393
+S+NA++AG++ + A + + +D ++T+ ++ + L +
Sbjct: 107 AVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRA 166
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------- 440
+G++VH I R + + F + L+DMY K G + A+ F +M +
Sbjct: 167 LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLL 226
Query: 441 -----------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
RD ++W ++TG + G EA+ F M+ E ++TF +
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L AC +++ E+GKQIH + IR Y+ N+ ALV++Y+KC + A VF+ + +
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKN 346
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+I +MI+G+ N G EA+ VF M+ +GIKP+ T ++ +C + +++ QF
Sbjct: 347 IISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFH- 405
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
M G+ P + ++ LY + G +++ + MPF+ V + +GYA
Sbjct: 406 CMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALV------SGYA 459
Query: 663 TLGE 666
G+
Sbjct: 460 QFGK 463
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 38/388 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I +C +++ARG+F+ M +RD +W M+ TQNG L++F M
Sbjct: 215 VVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRA 274
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV +Q T+ ++L + KQ+H ++ + GN+ + S+LVD Y KC +
Sbjct: 275 EGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRL 334
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + KN +SW ++ Y G G+EAV +F +M + I+P +FT + + +C+
Sbjct: 335 AEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCAN 394
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+S EG Q H + + V +L +Y KCG +EDA L D+ + +S+T++
Sbjct: 395 LASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTAL 454
Query: 317 VSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
VSGYA G+ +E +LF +M + V +++ +L+ +RS L ++ + M++
Sbjct: 455 VSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQD-- 512
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
HG + +D+ + ++D+Y + G L+ A
Sbjct: 513 --------------------------HGIVLLDDHYT------CMIDLYSRSGRLKEAEE 540
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ QM + D + W +L+ RG E
Sbjct: 541 FIRQMPRCPDAIGWATLLSACRLRGDME 568
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 234/497 (47%), Gaps = 76/497 (15%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y L HL A S + AR+L + P P +F N + L D
Sbjct: 43 PPTYVL-NHLLTAYARSGRLPLARRLFDAM----PDPNLFTRNALLSALAHARLLPDMDR 97
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-------NHSGVSANQITYANVLR 151
LF MP+RD S+NA++ ++ G P R + + + + V ++IT + ++
Sbjct: 98 LFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVM 157
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+++ + + +Q+H I++ GF S LVD Y K ++ DA+R+FD++ KN V
Sbjct: 158 AASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVM 217
Query: 212 WNVIVRRYL--------------------------VAG---NG--KEAVVMFFKMLREDI 240
+N ++ L V G NG EA+ +F +M E +
Sbjct: 218 YNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGV 277
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+TF + L AC L++ EG QIH I+ ++G+ V +L +MY KC + A
Sbjct: 278 GIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEA 337
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ + +NIISWT+++ GY +G EA +F+EM + +
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGI-----------------KP 380
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
DF TLG +++ CA L+ ++ G + H + I VS+AL+ +
Sbjct: 381 NDF--------------TLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTL 426
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
Y KCG++ A F +M D+VS+ A+++GYA+ G+++E + F +M + +P+ T
Sbjct: 427 YGKCGSIEDAHRLFDEMP-FHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVT 485
Query: 480 FETLLAACANISSLEQG 496
F +L+AC+ +E+G
Sbjct: 486 FIGVLSACSRSGLVEKG 502
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 281/497 (56%), Gaps = 4/497 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ ++ D V SL +YV+ GRLEDAR + D+ R+++S+T++
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GYA G I A++LF+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I + + SN+ + N+L+D+Y KCG L +A ++
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETA-CGLFE 325
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+D +SWN ++ GY +EA+ F EM + RP+ T ++L ACA++ +++
Sbjct: 326 GLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDI 385
Query: 496 GKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + R +L+++Y KC +E A +VF + N+MI GF
Sbjct: 386 GRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R A ++F M+K GI+PD ITF G+L AC G + L F +M Y I P+
Sbjct: 446 AMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPK 505
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
LEHY CMI L G KE E+ +N M P + + C+ G LGE A+ L
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLI 565
Query: 674 ELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 566 KIEPENPGCYVLLSNIY 582
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 240/539 (44%), Gaps = 99/539 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + + P L+L++ M G+ N T+ +L+S A+
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR----------------- 198
+Q+HG ++K G+ ++ + +SL+ Y + + DAR
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206
Query: 199 --------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++FD+I K+ VSWN ++ Y GN KEA+ +F +M++ +IRP
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + AC+ S G Q+H I F + ++ SL ++Y KCG LE A GL +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEG 326
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++ISW +++ GY T L+KEAL
Sbjct: 327 LLYKDVISWNTLIGGY-------------------------------THMNLYKEALLLF 355
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS--NALLDMYR 422
M ++ + + VT+ IL CA L I +G+ +H +I + S+ S +L+DMY
Sbjct: 356 QEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYA 415
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFE 481
KCG++ +A F + + SWNA++ G+A G+++ A FS M + P TF
Sbjct: 416 KCGDIEAAHQVFNSILH-KSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFV 474
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL+AC+ L+ G+ I + ++ +K + L
Sbjct: 475 GLLSACSRSGMLDLGRHIFRTMTQD----------------------------YKITPKL 506
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ C +LG H+ +EA E+ M+ E PD + + +L AC GNV+L F
Sbjct: 507 EHYGCMIDLLG--HSGLFKEAEEMINNMEME---PDGVIWCSLLKACKIRGNVELGESF 560
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 199/457 (43%), Gaps = 68/457 (14%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P SY+ + L + CA SKA E +++ +++ +F+ I Y + G L+DAR
Sbjct: 132 PNSYT-FPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARK 190
Query: 99 -------------------------------LFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
LFDE+P +D SWNAM+ Y + G
Sbjct: 191 VFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF +M + + ++ T V+ + A+ + + +Q+H I GF N+ + +SL+D
Sbjct: 251 LELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDL 310
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F+ + K+ +SWN ++ Y KEA+++F +MLR RP + T
Sbjct: 311 YSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTM 370
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV--VLGSLTEMYVKCGRLEDARGLLDQP 305
+ L AC+ L + G IH I K + + SL +MY KCG +E A + +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+++ SW +++ G+A+ GR A ++F+
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADAAFDIFSR------------------------------ 460
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRK 423
MRK + D +T +L+ C+ + +G+ + + DY + + ++D+
Sbjct: 461 -MRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM-TQDYKITPKLEHYGCMIDLLGH 518
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
G + A M D V W ++L RG E
Sbjct: 519 SGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVE 555
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 326/654 (49%), Gaps = 12/654 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
L + C S + + + +++ + + V + N + Y KC D A +F EM ER
Sbjct: 16 LLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRER 75
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
D SWN + A ++G TL L M G++ +++T+ + L + L + +H
Sbjct: 76 DLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIH 135
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
L+++RG G+V+L ++LV YG+C + AR +F + +N VSWN +V + +
Sbjct: 136 ALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFA 195
Query: 227 EAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ +F +M+ + P +F L A + + EG +IH +I + V +L
Sbjct: 196 EAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEMIQERQLLSQIEVANAL 255
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN------EMPER 339
MY +CG + DA + + R+++SW +++S YA SG E LF+ M R
Sbjct: 256 VTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLACEVVNLFHRMRAERSMAAR 315
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+VISWN M+ GY ++ AL M +QVT +L+VC + ++ G+ +H
Sbjct: 316 DVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRALLRQGETIH 375
Query: 400 GFI--HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+ + SS+ V+ A+++MY KCG L +AR F S R + SWN++++ YA G
Sbjct: 376 RCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHR-NLASWNSMISAYALHG 434
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
++E+A M+ E P + TF TLL AC ++ QGK IH +I + E + V
Sbjct: 435 RAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRQGKMIHARIIDSGLEKDTVVAN 494
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
ALV Y+KC L+ A +F DV+ N +I GF HN REAL+ LM+++G++P
Sbjct: 495 ALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRP 554
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D ITF IL A H G ++ F SM + + +EHY CMI L R G + E E F
Sbjct: 555 DAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGEAEYF 614
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V+ M + C +G + A + E+NP + +N +
Sbjct: 615 VSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLY 668
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 158/375 (42%), Gaps = 37/375 (9%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCG 293
M + P TF L AC +G QIH + + E D V ++ MY KC
Sbjct: 1 MAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCE 60
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
R + A + + ER++ISW N I+ NA YT
Sbjct: 61 RADLAMAVFSEMRERDLISWN-------------------------NAIAANAESGDYTF 95
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+L +++ + D+VT LN C G + G+ +H + ++ +
Sbjct: 96 TLALLKSMQLEGMAP------DKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVL 149
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QW 471
AL+ MY +CG L SAR F++M + R+ VSWNA++ EA+ F M
Sbjct: 150 GTALVTMYGRCGCLESAREIFHRMPE-RNVVSWNAMVASCTLNAHFAEAIELFKRMVAVA 208
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P++ +F T+L A +L +G++IH + + ALV +Y +C + A
Sbjct: 209 MVEPTRVSFITVLNAVTTREALAEGRRIHEMIQERQLLSQIEVANALVTMYGRCGGVGDA 268
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG--IKPDHITFHGILLACI 589
RVF D++ N+MI + + E + +F M+ E D I+++ ++ +
Sbjct: 269 ERVFSAMERRDLVSWNAMISAYAQSGLACEVVNLFHRMRAERSMAARDVISWNTMITGYV 328
Query: 590 HEGNVKLALQFFDSM 604
G+ AL F M
Sbjct: 329 QAGDPFSALSIFKRM 343
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFV-IRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P++ TF LL AC + LE GKQIH V E +V A++ +Y KC + A+
Sbjct: 8 PNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMA 67
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF E D+I N+ I + L + M+ EG+ PD +TF L ACI +
Sbjct: 68 VFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRS 127
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ + ++ + G+ + ++ +Y R G ++ + +RMP
Sbjct: 128 LSNG-RLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMP 174
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 283/542 (52%), Gaps = 64/542 (11%)
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++FD I+N N WN ++R Y+ + + ++A++++ M++ ++ P N+T+ + AC+
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G +IH ++K+ F+ D V +L MY CG + DAR L D+ + +SW SI++
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILA 215
Query: 319 GYAISGRIREARELFNEMPERNVI-------------------------------SWNAM 347
GY G + EA+ +F++MP+RN++ SW+A+
Sbjct: 216 GYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSAL 275
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
++GY ++ +++EAL M +D+V + +L+ CA LS +K GK +HG + R
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGI 335
Query: 408 SSNIFVSNALLDMYR-------------------------------KCGNLRSARIWFYQ 436
S + + NAL+ MY KCG++ AR F
Sbjct: 336 ESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDV 395
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQ 495
M ++ D VSW+AV++GYA+ E + F EMQ + RP + ++++AC ++++L+Q
Sbjct: 396 MPEK-DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK +H ++ +N ++NV+ L+++Y KC C+E A+ VF V N++I+G
Sbjct: 455 GKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAV 514
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
N +L++F MK G+ P+ ITF G+L AC H G V F SM K+GI P ++
Sbjct: 515 NGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVK 574
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G + E E + MP P V + C+K+G +GE R+L EL
Sbjct: 575 HYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIEL 634
Query: 676 NP 677
P
Sbjct: 635 QP 636
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 264/549 (48%), Gaps = 44/549 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y+ Y + Q CA +++ +++ V++ N I Y CGN+ DAR
Sbjct: 139 PDNYT-YPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARK 197
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFDE P D SWN++L Y + G D+ + + +Q+ N++ S++
Sbjct: 198 LFDESPVLDSVSWNSILAGYVKKG----------DVEEAKLIFDQMPQRNIVASNS---- 243
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+IV G G V+ +A ++F+++ K+ VSW+ ++
Sbjct: 244 ---------MIVLLGKMGQVM----------------EAWKLFNEMDEKDMVSWSALISG 278
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G +EA+VMF +M +R + L AC+ LS G IHG++I++ E
Sbjct: 279 YEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 338
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L MY G + DA+ L + + ISW S++SG G + +AR LF+ MPE
Sbjct: 339 VNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPE 398
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++++SW+A+++GY + + E L M+ D+ L +++ C L+ + GK V
Sbjct: 399 KDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWV 458
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H +I +N N+ + LLDMY KCG + +A F M + + SWNA++ G A G
Sbjct: 459 HAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM-EEKGVSSWNALIIGLAVNGL 517
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK-QIHCFVIRNCYEINVVCRG 516
E ++ FSEM+ P++ TF +L AC ++ +++G+ + ++ E NV G
Sbjct: 518 VERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYG 577
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+V++ + L A ++ + + +LG C E E G E ++P
Sbjct: 578 CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE-LQP 636
Query: 577 DHITFHGIL 585
DH FH +L
Sbjct: 637 DHDGFHVLL 645
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 140/296 (47%), Gaps = 9/296 (3%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I KCG+++ AR LFD MPE+D SW+A++ Y Q+ TL LF +M +
Sbjct: 374 NSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIR 433
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ +V+ + L K +H I K G NVIL ++L+D Y KC + +A +
Sbjct: 434 PDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEV 493
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+ ++ K SWN ++ V G + ++ MF +M + P TF L AC +
Sbjct: 494 FNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLV 553
Query: 261 YEGM-QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
EG +I K E + G + ++ + G L +A L++ P ++ +W +++
Sbjct: 554 DEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLG 613
Query: 319 GYAISGRI----REARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRK 369
G R R+L P+ + ++ +L+ + W++ L+ +M++
Sbjct: 614 ACKKHGDTEMGERVGRKLIELQPDHD--GFHVLLSNIFASKGDWEDVLEVRGMMKQ 667
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
G ++ DE + S+ + C A+ + + + + + V L ++ Y KCG
Sbjct: 430 GQIRPDETILVSVIS----ACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCG 485
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+++A +F+ M E+ SWNA++ NG R+L++F +M ++GV N+IT+ VL
Sbjct: 486 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVL- 544
Query: 152 SSAEELELGVSKQLH--GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKN 208
+ + L + H +I K G NV +VD G+ ++ +A ++ + + +
Sbjct: 545 GACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPD 604
Query: 209 AVSWNVIV 216
+W ++
Sbjct: 605 VATWGALL 612
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 300/573 (52%), Gaps = 10/573 (1%)
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY--ANVLRSSAEELELGVSKQLHGLIV 170
A L + +G + F + H S++ + + ++L + L KQLH ++
Sbjct: 49 ASLKDFVTHGHLTNAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLSQGKQLHAQVI 108
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
G N IL S LV+ Y ++ DA+ + + + + WN+++ Y+ G EA+
Sbjct: 109 SLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLISAYVRNGFFVEALC 168
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
++ ML + I P +T+ + L AC G+++H I E V +L MY
Sbjct: 169 VYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYG 228
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNA 346
+ G+LE AR L D R+ +SW +I+S YA G +EA +LF M E NVI WN
Sbjct: 229 RFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNT 288
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+ G S ++ AL + MR T+ +D + + + LN C+ + IK+GKE+HG R
Sbjct: 289 IAGGCLHSGNFRGALQLISQMR-TSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTC 347
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ V NAL+ MY +C +L A I F++ ++ + ++WNA+L+GYA + EE F
Sbjct: 348 FDVFDNVKNALITMYSRCRDLGHAFILFHR-TEEKGLITWNAMLSGYAHMDRYEEVTFLF 406
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYEINVVCRGALVEVYTK 524
EM E P+ T ++L CA I++L+ GK+ HC+++++ +E ++ ALV++Y++
Sbjct: 407 REMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSR 466
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+ A +VF + D + SMILG+ G L++F M K IKPDH+T +
Sbjct: 467 SGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAV 526
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V F M +GI+P+LEHY CM L+ R G + + ++F+ MP+ P
Sbjct: 527 LTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKP 586
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
T M + CR +G +GEWAA +L E+ P
Sbjct: 587 TSAMWATLLGACRIHGNTEMGEWAAGKLLEMKP 619
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 223/487 (45%), Gaps = 70/487 (14%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C K++ + ++L + +++ L++R + Y L DA+ + + D
Sbjct: 87 LLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLD 146
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN ++ AY +NGF L ++ +M + + ++ TY +VL++ E L+ ++H
Sbjct: 147 PLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHR 206
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I ++ + ++LV YG+ + AR +FD++ +++VSWN I+ Y G KE
Sbjct: 207 SIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKE 266
Query: 228 AVVMFFKMLREDIRPLNFTFAN-----------------------------------ALF 252
A +F M E + +N N L
Sbjct: 267 AFQLFGSMQEEGVE-MNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLN 325
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS + + G +IHG ++ F+ D V +L MY +C L A L + +E+ +I+
Sbjct: 326 ACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLIT 385
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W +++SGYA R E LF EM + +
Sbjct: 386 WNAMLSGYAHMDRYEEVTFLFREMLQEGM------------------------------- 414
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSAR 431
+ + VT+ +L +CA ++ ++ GKE H +I ++ + + + NAL+DMY + G + AR
Sbjct: 415 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEAR 474
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANI 490
F ++ +RD+V++ +++ GY +G+ E + F EM + E +P T +L AC++
Sbjct: 475 KVFDSLT-KRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHS 533
Query: 491 SSLEQGK 497
+ QG+
Sbjct: 534 GLVAQGQ 540
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 324/635 (51%), Gaps = 36/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + +LC+ S I + ++ + V++ N + YG CG L+DAR LFDEMP
Sbjct: 162 FPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP 221
Query: 105 ERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ERD SWN ++G + NG + F + S + N ++ ++L SA + +++
Sbjct: 222 ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTR 281
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H VK G V ++LVDAYGKC + ++F++ KN VSWN I+ G
Sbjct: 282 RIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 341
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+A+ F M+ +P + T ++ L L G +IHG +++ E D +
Sbjct: 342 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 401
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY K SG EA +F+ + RN++S
Sbjct: 402 SLIDMYAK-------------------------------SGHSTEASTIFHNLDRRNIVS 430
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAM+A Y + L EA+ FV M++T + + VT +L CA L + GKE+H
Sbjct: 431 WNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGV 490
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R +S++FVSN+L+DMY KCG L SAR F + R+D+VS+N ++ GY+ +++
Sbjct: 491 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN--TSRKDEVSYNILIIGYSETDDCLQSL 548
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
FSEM+ +P +F +++ACAN+++L+QGK++H +RN ++ +L++ Y
Sbjct: 549 NLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFY 608
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
TKC ++ A R+F + DV N+MILG+ A+ +F M+ + ++ D +++
Sbjct: 609 TKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYI 668
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V+ Q+F M + + P HY CM+ L R G+++E + ++P
Sbjct: 669 AVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPI 727
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR G LG AA L EL P
Sbjct: 728 APDANIWGALLGACRIYGNVELGRRAAEHLFELKP 762
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 158/561 (28%), Positives = 272/561 (48%), Gaps = 45/561 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLES-NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
++ +L LC+ +++++ +++ + ++ + V L I Y K + LF++
Sbjct: 56 IHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQ 115
Query: 103 MPE--RDGGSWNAMLGAYT--QNG-FPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ R WN ++ A++ NG F G E + M GV + T+ VL+ ++
Sbjct: 116 TFQNCRTAFLWNTLIRAHSIAWNGTFDG--FETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++ ++HG++ K GF +V + ++L+ YG C + DARR+FD++ ++ VSWN I+
Sbjct: 174 DICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIG 233
Query: 218 RYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
V G+ EA +F M LR I+P + + L + L +IH +K+ +
Sbjct: 234 LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLD 293
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+L + Y KCG ++ + ++ E+N +SW SI++G A GR +A F
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFR-- 351
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+M + VT+ IL V L K GK
Sbjct: 352 -----------------------------MMIDAGAQPNSVTISSILPVLVELECFKAGK 382
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E+HGF R ++IF++N+L+DMY K G+ A F+ + RR+ VSWNA++ YA
Sbjct: 383 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNL-DRRNIVSWNAMIANYALN 441
Query: 457 GQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
EA+ +MQ ET P+ TF +L ACA + L GK+IH +R ++
Sbjct: 442 RLPLEAIRFVIQMQ-ETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFV 500
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+L+++Y KC CL A VF S D + N +I+G+ + ++L +F M+ G
Sbjct: 501 SNSLIDMYAKCGCLHSARNVFNTSRK-DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 559
Query: 575 KPDHITFHGILLACIHEGNVK 595
KPD ++F G++ AC + +K
Sbjct: 560 KPDVVSFVGVISACANLAALK 580
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 237/499 (47%), Gaps = 39/499 (7%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDD- 203
+ N+L ++ L +KQ+H L + GF +V L +SL+ Y K +F+
Sbjct: 57 HINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQT 116
Query: 204 IQN-KNAVSWNVIVRRYLVAGNGK-EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
QN + A WN ++R + +A NG + + +M+R ++ + TF L CS
Sbjct: 117 FQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDIC 176
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+GM++HGV+ K+ F+ D V +L +Y CG L DAR L D+ ER+++SW +I+ +
Sbjct: 177 KGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLS 236
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
++G EAR + M R+VI N V++
Sbjct: 237 VNGDYTEARNYYFWMILRSVIKPNL------------------------------VSVIS 266
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW-FYQMSQR 440
+L + A L + +M + +H + + S + NAL+D Y KCG++++ +W + +
Sbjct: 267 LLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKA--LWQVFNETVE 324
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+++VSWN+++ G A +G+ +A+ +F M +P+ T ++L + + GK+I
Sbjct: 325 KNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI 384
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H F +R E ++ +L+++Y K A +F +++ N+MI + N
Sbjct: 385 HGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLP 444
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EA+ M++ G P+ +TF +L AC G + + +M + G+ L
Sbjct: 445 LEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKE-IHAMGVRIGLTSDLFVSNS 503
Query: 620 MIKLYCRYGYMKELEDFVN 638
+I +Y + G + + N
Sbjct: 504 LIDMYAKCGCLHSARNVFN 522
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/654 (28%), Positives = 323/654 (49%), Gaps = 36/654 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P +Y+ + + CA A+ + ++ +++ N I+ Y + +LD AR
Sbjct: 112 QPDTYT-FPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKAR 170
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F+EMP RD SWN+++ Y NG+ LE++ + GV + T ++VLR+
Sbjct: 171 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLG 230
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +HGLI K G +VI+ + L+ Y K + D RR+FD + ++AVSWN ++
Sbjct: 231 SVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMIC 290
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G +E++ +F +M+ + +P T + L AC L G +H +I +E
Sbjct: 291 GYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 349
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D L MY KCG L ++E+F+ M
Sbjct: 350 DTTASNILINMYAKCGNL-------------------------------LASQEVFSGMK 378
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ +SWN+M+ Y ++ + EA+ +F M KT D VT ++L++ L ++ +GKE
Sbjct: 379 CKDSVSWNSMINVYIQNGSFDEAMK-LFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKE 437
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + + ++SNI VSN L+DMY KCG + + F M + RD ++WN ++
Sbjct: 438 LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSE 496
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ S M+ E P T ++L C+ +++ QGK+IH + + E +V
Sbjct: 497 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 556
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+E+Y+KC L + +VFK + DV+ ++I G++A+ FG M+ GI P
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 616
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
DH+ F I+ AC H G V+ L +F M+ Y I P++EHY C++ L R + + EDF
Sbjct: 617 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 676
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + + CR +G + E + R+ ELNP + + +N +
Sbjct: 677 ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIY 730
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 269/547 (49%), Gaps = 34/547 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD- 101
+L++ + + AS+ + KL S ++T V + I Y + + +F
Sbjct: 14 TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
P + WN+++ A T NG L L+ + + + T+ +V+ + A L+ +
Sbjct: 74 ASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 133
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+K +H ++ GF ++ + ++L+D Y + + AR++F+++ ++ VSWN ++ Y
Sbjct: 134 AKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G EA+ ++++ + P ++T ++ L AC L S EG IHG+I KI + D +V
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 253
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L MY K L D R + D+ R+ +SW +++ GY+ G E+ +LF EM +
Sbjct: 254 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-- 311
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+K D +T+ IL C L +++ GK VH +
Sbjct: 312 ---------------FKP---------------DLLTITSILQACGHLGDLEFGKYVHDY 341
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + Y + SN L++MY KCGNL +++ F M + +D VSWN+++ Y + G +E
Sbjct: 342 MITSGYECDTTASNILINMYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDE 400
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
AM F M+ + +P T+ LL+ + L GK++HC + + + N+V LV++
Sbjct: 401 AMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDM 460
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC + +++VF+ + D+I N++I H+E L + M+ EG+ PD T
Sbjct: 461 YAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 520
Query: 582 HGILLAC 588
IL C
Sbjct: 521 LSILPVC 527
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 225/493 (45%), Gaps = 35/493 (7%)
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ Q ++++ R+ A +LH LI+ G +VI + L+ Y T + +
Sbjct: 11 SRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSV 70
Query: 201 FDDIQNKNAVS-WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
F N V WN I+R G EA+ ++ + R ++P +TF + + AC+ L
Sbjct: 71 FRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLD 130
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
IH ++ + F D + +L +MY + L+ AR + ++ R+++SW S++SG
Sbjct: 131 FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 190
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y +G W EAL+ + R D T+
Sbjct: 191 YNANG-------------------------------YWNEALEIYYRFRNLGVVPDSYTM 219
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+L C GL ++ G +HG I + ++ V+N LL MY K L R F +M
Sbjct: 220 SSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL 279
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI 499
RD VSWN ++ GY++ G EE++ F EM + +P T ++L AC ++ LE GK +
Sbjct: 280 -RDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYV 338
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H ++I + YE + L+ +Y KC L + VF D + NSMI + N
Sbjct: 339 HDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSF 398
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EA+++F +MK + +KPD +T+ +L G++ L + + K G +
Sbjct: 399 DEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDL-AKMGFNSNIVVSNT 456
Query: 620 MIKLYCRYGYMKE 632
++ +Y + G M +
Sbjct: 457 LVDMYAKCGEMGD 469
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 2/309 (0%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+K+D Y L + + ++L +L + + N ++ Y KCG +
Sbjct: 408 MKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEM 467
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D+ +F+ M RD +WN ++ + + L + M GV+ + T ++L
Sbjct: 468 GDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVC 527
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+ K++HG I K G +V + + L++ Y KC + ++ ++F ++ K+ V+W
Sbjct: 528 SLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWT 587
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIK 272
++ + G GK+AV F +M I P + F +FACS EG+ H +
Sbjct: 588 ALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKD 647
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRIREARE 331
E + ++ + L+ A +L P + + W +++S +SG A
Sbjct: 648 YKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAER 707
Query: 332 LFNEMPERN 340
+ + E N
Sbjct: 708 VSERIIELN 716
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++H I ++ S L+ Y + S+ F S + WN+++
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 457 GQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G EA++ +SE Q +P +TF +++ ACA + E K IH V+ + ++
Sbjct: 94 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y + L+ A +VF+E DV+ NS+I G+ N EALE++ + G+
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD T +L AC G+V+ + K GI + ++ +YC++ + +
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRR 272
Query: 636 FVNRMPFNPTV 646
++M V
Sbjct: 273 IFDKMVLRDAV 283
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 8/189 (4%)
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ES 538
F ++ A A+ ++ Q ++H +I +V+ L+ Y + VF+ S
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
S +V + NS+I HN EAL ++ ++ ++PD TF ++ AC + ++A
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
D + G L +I +YCR+ + + MP V I
Sbjct: 136 SIHDRV-LDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI------ 188
Query: 659 NGYATLGEW 667
+GY G W
Sbjct: 189 SGYNANGYW 197
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/676 (28%), Positives = 343/676 (50%), Gaps = 34/676 (5%)
Query: 16 SSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTP 75
++ P T + + + SD+ ++ + L Q+ S ++ + + + L
Sbjct: 52 NAQDPNSKTTHSSMVYCNSDSDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQN 111
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
F N + YGK L DA+ +FDEM R+ +W ++ + Q + +M
Sbjct: 112 DAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMY 171
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
G N+ T + +L++ L +Q+HG ++KRGF +V + +SL+ Y +C +
Sbjct: 172 WVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLG 231
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +++ ++ K+ N ++ Y AG G++A+ +F +L + P ++TF N + AC+
Sbjct: 232 AAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACN 291
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
ID E VL L M +KCG ++ I +
Sbjct: 292 G---------------DIDVE----VLRVLHGMCIKCGCGDE------------ISVGNA 320
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
IVS Y G + EA + F M ERN++SW A+L+GY ++ K+AL+ + + D
Sbjct: 321 IVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFD 380
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+L+ C+ + +G ++HGF+ + Y ++ V AL+D+Y KC LRSAR+ F+
Sbjct: 381 SCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFH 440
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLE 494
+ + + VS+NA+L+GY + E+AM FS+++ + +P TF LL+ A+ + L
Sbjct: 441 SLLDK-NIVSFNAILSGYIGADE-EDAMALFSQLRLADIKPDSVTFARLLSLSADQACLV 498
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK +H ++I+ +E N A++ +Y KC + A ++F + LD I N++I +
Sbjct: 499 KGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYA 558
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ +GR+AL +F MKKE PD IT +L AC + G ++ F+ M KYGI P++
Sbjct: 559 LHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEI 618
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EH+ CM+ L R GY+ E F+NR PF+ + + R + C+ +G G+ A++ L +
Sbjct: 619 EHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLD 678
Query: 675 LNPWAPFQFKITTNRF 690
L P + + +N +
Sbjct: 679 LAPEEAGSYILVSNLY 694
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 315/635 (49%), Gaps = 81/635 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
NR ++ Y +C ++ +A+ LF+EMP+R+ SWN M+ Y ++G G++LELF M H
Sbjct: 46 NRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPH---- 101
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
K F NV+ + + K + ARR+
Sbjct: 102 ------------------------------KDAFSWNVV-----ISGFAKEGNLEVARRL 126
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL------NFTFANALFAC 254
F+++ KN ++WN ++ Y G KEAV +F + + PL F A + AC
Sbjct: 127 FNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL---SLNPLERFCGDTFVLATVVGAC 183
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L + G QIH I+ + E D V+ SL +Y KCG ++ A +L+ E + S +
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++SGYA GR+ +AR +F V+ WN+M++GY + EAL+ MR+
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC---------- 424
D T +L+ C+ L I G +VH +++ ++++I + +AL+DMY KC
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 363
Query: 425 ---------------------GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
G + AR F M + +SWN+++ G+++ EA+
Sbjct: 364 SDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSK-SLISWNSMIVGFSQNACPIEAL 422
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM + R KF+ +++ACA+ISSLE G+QI E + + +LV+ Y
Sbjct: 423 DLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFY 482
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC +E+ ++F D + NSM++G+ N G EAL VF M+ G++P ITF
Sbjct: 483 CKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFV 542
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V+ ++F +M+ Y I P +EHY CM+ LY R G +++ + + +MP
Sbjct: 543 GVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPL 602
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M + C +G LG+ A+R+ +L+P
Sbjct: 603 KADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDP 637
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/517 (30%), Positives = 261/517 (50%), Gaps = 37/517 (7%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+I + + A+ + + AR +FD++ ++ VSWN ++ Y+ G +A F +M
Sbjct: 775 NLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQ 834
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRL 295
+ IRP FT++ L SF+SS G QIH +I+ + +VV+G SL MY K G +
Sbjct: 835 KAGIRPSGFTYSTLL---SFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVV 891
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ A G+ F M E ++ISWN+++ +S
Sbjct: 892 DYAFGV-------------------------------FITMEELDIISWNSLIWSCGKSG 920
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
AL LMR DQ T+ ++ VC+ L +++ G+++ R + SN VS+
Sbjct: 921 YQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSS 980
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS-EMQWETR 474
A +D++ KC L + F ++ Q D V NA+++ YA G E A+ F ++ R
Sbjct: 981 ASIDLFSKCNRLEDSVRVFEEIYQW-DSVLCNAMISSYAWHGFGENALQLFVLTLRENLR 1039
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P++FT +L+A + + ++QG QIH V+++ E +V+ +LVE+Y K ++ A++
Sbjct: 1040 PTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKT 1099
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + + D+I N+MI+G +N R +ALE+F + G PD IT G+LLAC G V
Sbjct: 1100 FAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLV 1159
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
L F SM +YG+IP +EHY C++ + R G +KE D V MP P+ + +
Sbjct: 1160 DEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLC 1219
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFD 691
C G E A R+ EL P + + + ++
Sbjct: 1220 ACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYE 1256
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 255/502 (50%), Gaps = 39/502 (7%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P F N I + K GNL+ AR LF+EMP ++G +WN+M+ Y NG P + LF
Sbjct: 100 PHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFK 159
Query: 133 DMNHSGVS---ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
D++ + + + A V+ + L KQ+H IV + +L SSLV+ YG
Sbjct: 160 DLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYG 219
Query: 190 KCM-------------------------------VMTDARRMFDDIQNKNAVSWNVIVRR 218
KC M DARR+F N V WN ++
Sbjct: 220 KCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISG 279
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ EA+ +F M R+ ++ TFA+ L ACS L +G+Q+H + K+ F D
Sbjct: 280 YVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTND 339
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
++ +L +MY KC R +DA L + I S+++ Y+ GRI +AR++F+ MP
Sbjct: 340 IIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPS 399
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+++ISWN+M+ G++++ EALD M K +D+ +L +++ CA +S +++G+++
Sbjct: 400 KSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQI 459
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ +S +L+D Y KCG + R F +M + D+V WN++L GYA G
Sbjct: 460 FARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Query: 459 SEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN--VVCR 515
EA+ F +M+ +P+ TF +L+AC + +E+G++ + ++ Y IN +
Sbjct: 519 GIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWF-YAMKLDYHINPGIEHY 577
Query: 516 GALVEVYTKCCCLEYAIRVFKE 537
+V++Y + LE A+ + ++
Sbjct: 578 SCMVDLYARAGLLEDAMNLIEQ 599
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 171/671 (25%), Positives = 297/671 (44%), Gaps = 122/671 (18%)
Query: 42 YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG---------- 91
YS +A + C++ I + ++ +++ T + + + ++ Y KC
Sbjct: 305 YSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFS 364
Query: 92 ---------------------NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+DDAR +FD MP + SWN+M+ ++QN P L+L
Sbjct: 365 DLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDL 424
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F +MN G+ ++ + A V+ + A L + +Q+ G + I+ +SLVD Y K
Sbjct: 425 FCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCK 484
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C ++ R++FD + + V WN ++ Y G+G EA+ +F +M ++P + TF
Sbjct: 485 CGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGV 544
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLDQ-PDE 307
L AC EG + +K+D+ + + + ++Y + G LEDA L++Q P +
Sbjct: 545 LSACDHCGLVEEGRKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLK 603
Query: 308 RNIISWTSIVSGYAISGR----IREARELFNEMPERN--VISWNAMLAGY--------TR 353
+ W+S++ G G + A+ + + PE + + + + A + R
Sbjct: 604 ADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVR 663
Query: 354 SLLWKEAL--DFVFL---------MRKTTKDIDQVT--LGLILNVCA------------- 387
L++ + + D F + TK++ ++ L+L + A
Sbjct: 664 KLMYDKKIPKDTSFDIAGEEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKF 723
Query: 388 -----GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG---------------NL 427
L E M +V GF +++ F+ N LD+Y + G NL
Sbjct: 724 MAARRTLLEFDMLIKV-GF------NTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNL 776
Query: 428 RSARIW------FYQMSQRRD---------KVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
S I+ F ++ + RD VSWN +++GY G ++A FSEMQ
Sbjct: 777 ISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKA 836
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCRGALVEVYTKCCCLEY 530
RPS FT+ TLL+ +SS +GKQIH +IRN ++ NVV +L+ +Y K ++Y
Sbjct: 837 GIRPSGFTYSTLLSF---VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDY 893
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A VF LD+I NS+I + AL F LM+ G PD T ++ C +
Sbjct: 894 AFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSN 953
Query: 591 EGNVKLALQFF 601
+++ Q F
Sbjct: 954 LQDLEKGEQIF 964
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 186/364 (51%), Gaps = 7/364 (1%)
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
++IK+ F + ++Y + G D+ + + ++N+ISW + + G +
Sbjct: 735 MLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELER 794
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR++F+EMP+R+V+SWN M++GY L+ +A F M+K T +L+
Sbjct: 795 ARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSF--- 851
Query: 389 LSEIKMGKEVHGFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+S GK++H + RN SN+ V N+L+ MY K G + A F M + D +SWN
Sbjct: 852 VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITM-EELDIISWN 910
Query: 448 AVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+++ + G A+ F M+ P +FT T++ C+N+ LE+G+QI IR
Sbjct: 911 SLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRV 970
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ N + A +++++KC LE ++RVF+E D ++CN+MI + + G AL++F
Sbjct: 971 GFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLF 1030
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
L +E ++P T +L A V Q S+ K G+ + ++++Y +
Sbjct: 1031 VLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIH-SLVVKSGLESDVIVASSLVEMYAK 1089
Query: 627 YGYM 630
+G +
Sbjct: 1090 FGLI 1093
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 155/297 (52%), Gaps = 4/297 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I YGK G +D A G+F M E D SWN+++ + ++G+ L F+ M
Sbjct: 875 VVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRS 934
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G S +Q T + V+ + +L +Q+ L ++ GF N I+ S+ +D + KC + D
Sbjct: 935 VGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLED 994
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ R+F++I ++V N ++ Y G G+ A+ +F LRE++RP FT + L A S
Sbjct: 995 SVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSI 1054
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L +G QIH +++K E D +V SL EMY K G ++ A + R++ISW ++
Sbjct: 1055 LLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTM 1114
Query: 317 VSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ G A +GR+ +A E+F E+ P + I+ +L L E L M K
Sbjct: 1115 IMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEK 1171
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 199/422 (47%), Gaps = 39/422 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ + + G L+ AR +FDEMP+RD SWN M+ Y G F +M +G+
Sbjct: 780 NIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIR 839
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVILESSLVDAYGKCMVMTDARR 199
+ TY+ +L + KQ+H +++ G NV++ +SL+ YGK V+ A
Sbjct: 840 PSGFTYSTLLSFVSSACR---GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFG 896
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F ++ + +SWN ++ +G A+ F M P FT + + CS L
Sbjct: 897 VFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQD 956
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G QI + I++ F + +V + +++ KC RLED+ + ++ I W S++
Sbjct: 957 LEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEE-----IYQWDSVLC- 1010
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVT 378
NAM++ Y + AL FV +R+ + + T
Sbjct: 1011 -------------------------NAMISSYAWHGFGENALQLFVLTLRENLRPT-EFT 1044
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L ++L+ + L + G ++H + ++ S++ V+++L++MY K G + SA F ++
Sbjct: 1045 LSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIG 1104
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGK 497
RD +SWN ++ G A G+ +A+ F E+ P + T +L AC +++G
Sbjct: 1105 A-RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGL 1163
Query: 498 QI 499
I
Sbjct: 1164 SI 1165
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 225/521 (43%), Gaps = 112/521 (21%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
+ A L +C+ S Y G +H + +K + +G+ L +MY +C + +A+ L ++
Sbjct: 8 SLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR----------- 353
+RN SW +++ GY SG ++ ELF+ MP ++ SWN +++G+ +
Sbjct: 68 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 127
Query: 354 -SLLWKEALDFVFLMRKTT------------KDI----------DQVTLGLILNVCAGLS 390
+ WK + + ++ KD+ D L ++ C L
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR-----------------IW 433
+ GK++H I ++ + + ++L+++Y KCG++ SA I
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 434 FYQMSQRRDK-------------VSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-T 479
Y R + V WN++++GY ++ EA+ F+ M+ + + T
Sbjct: 248 GYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
F ++L+AC+ + ++QG Q+H V + + +++ ALV++Y+KC + A ++F +
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 540 SLDVIIC-------------------------------NSMILGFCHNERGREALEVFGL 568
+ D I+ NSMI+GF N EAL++F
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----CMIKLY 624
M K G++ D + G++ AC +++L Q F I LE + ++ Y
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIF-----ARATIIGLEFDQIISTSLVDFY 482
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
C+ G ++ +RM + VP + GYAT G
Sbjct: 483 CKCGLVEHGRKLFDRMMKSDEVPWNSMLM------GYATNG 517
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 185/427 (43%), Gaps = 65/427 (15%)
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
++++ P F L+ I Y CG ++DAR +F WN+M+ Y N
Sbjct: 228 NHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEAL 287
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
LELF +M GV + T+A+VL + + + Q+H + K GF ++I++S+LV
Sbjct: 288 EALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALV 347
Query: 186 DAYGKC-----------------------MV--------MTDARRMFDDIQNKNAVSWNV 214
D Y KC M+ + DAR++FD + +K+ +SWN
Sbjct: 348 DMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNS 407
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ + EA+ +F +M + +R F+ A + AC+ +SS G QI I
Sbjct: 408 MIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIG 467
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E D ++ SL + Y KCG +E R L D+ + + + W S++ GYA +G EA +F+
Sbjct: 468 LEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFD 527
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ MR +T +L+ C ++
Sbjct: 528 Q-------------------------------MRSVGVQPTDITFVGVLSACDHCGLVEE 556
Query: 395 GKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G++ + + DY N + + ++D+Y + G L A QM + D W++VL G
Sbjct: 557 GRKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRG 615
Query: 453 YARRGQS 459
G +
Sbjct: 616 CVAHGNN 622
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 14/253 (5%)
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
+I+ + KC L+D+ +F+E+ + D NAM+ +Y +GF L+LF+ +
Sbjct: 982 SIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPT 1041
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ T + VL + + L + Q+H L+VK G +VI+ SSLV+ Y K ++ A + F
Sbjct: 1042 EFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFA 1101
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I ++ +SWN ++ G +A+ +F ++L P T A L AC+ E
Sbjct: 1102 KIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDE 1161
Query: 263 GMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWT 314
G+ I +GVI I+ + +M + G+L++A +++ P E + + W
Sbjct: 1162 GLSIFSSMEKEYGVIPAIEH------YACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG 1215
Query: 315 SIVSGYAISGRIR 327
S++ I G +R
Sbjct: 1216 SLLCACEIYGDLR 1228
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 324/635 (51%), Gaps = 36/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + +LC+ S I + ++ + V++ N + YG CG L+DAR LFDEMP
Sbjct: 13 FPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP 72
Query: 105 ERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ERD SWN ++G + NG + F + S + N ++ ++L SA + +++
Sbjct: 73 ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTR 132
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H VK G V ++LVDAYGKC + ++F++ KN VSWN I+ G
Sbjct: 133 RIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 192
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+A+ F M+ +P + T ++ L L G +IHG +++ E D +
Sbjct: 193 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 252
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY K SG EA +F+ + RN++S
Sbjct: 253 SLIDMYAK-------------------------------SGHSTEASTIFHNLDRRNIVS 281
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAM+A Y + L EA+ FV M++T + + VT +L CA L + GKE+H
Sbjct: 282 WNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGV 341
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R +S++FVSN+L+DMY KCG L SAR F + R+D+VS+N ++ GY+ +++
Sbjct: 342 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN--TSRKDEVSYNILIIGYSETDDCLQSL 399
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
FSEM+ +P +F +++ACAN+++L+QGK++H +RN ++ +L++ Y
Sbjct: 400 NLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFY 459
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
TKC ++ A R+F + DV N+MILG+ A+ +F M+ + ++ D +++
Sbjct: 460 TKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYI 519
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V+ Q+F M + + P HY CM+ L R G+++E + ++P
Sbjct: 520 AVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPI 578
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR G LG AA L EL P
Sbjct: 579 APDANIWGALLGACRIYGNVELGRRAAEHLFELKP 613
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 228/465 (49%), Gaps = 37/465 (7%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M GV + T+ VL+ ++ ++ ++HG++ K GF +V + ++L+ YG C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALF 252
+ DARR+FD++ ++ VSWN I+ V G+ EA +F M LR I+P + + L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ L +IH +K+ + +L + Y KCG ++ + ++ E+N +S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W SI++G A GR +A F +M
Sbjct: 181 WNSIINGLACKGRCWDALNAFR-------------------------------MMIDAGA 209
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ VT+ IL V L K GKE+HGF R ++IF++N+L+DMY K G+ A
Sbjct: 210 QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAST 269
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANI 490
F+ + RR+ VSWNA++ YA EA+ +MQ ET P+ TF +L ACA +
Sbjct: 270 IFHNL-DRRNIVSWNAMIANYALNRLPLEAIRFVIQMQ-ETGECPNAVTFTNVLPACARL 327
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
L GK+IH +R ++ +L+++Y KC CL A VF S D + N +I
Sbjct: 328 GFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRK-DEVSYNILI 386
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+G+ + ++L +F M+ G KPD ++F G++ AC + +K
Sbjct: 387 IGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALK 431
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 315/635 (49%), Gaps = 81/635 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
NR ++ Y +C ++ +A+ LF+EMP+R+ SWN M+ Y ++G G++LELF M H
Sbjct: 46 NRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPH---- 101
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
K F NV+ + + K + ARR+
Sbjct: 102 ------------------------------KDAFSWNVV-----ISGFAKEGNLEVARRL 126
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL------NFTFANALFAC 254
F+++ KN ++WN ++ Y G KEAV +F + + PL F A + AC
Sbjct: 127 FNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL---SLNPLERFCGDTFVLATVVGAC 183
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L + G QIH I+ + E D V+ SL +Y KCG ++ A +L+ E + S +
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++SGYA GR+ +AR +F V+ WN+M++GY + EAL+ MR+
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC---------- 424
D T +L+ C+ L I G +VH +++ ++++I + +AL+DMY KC
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 363
Query: 425 ---------------------GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
G + AR F M + +SWN+++ G+++ EA+
Sbjct: 364 SDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSK-SLISWNSMIVGFSQNACPIEAL 422
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM + R KF+ +++ACA+ISSLE G+QI E + + +LV+ Y
Sbjct: 423 DLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFY 482
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC +E+ ++F D + NSM++G+ N G EAL VF M+ G++P ITF
Sbjct: 483 CKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFV 542
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V+ ++F +M+ Y I P +EHY CM+ LY R G +++ + + +MP
Sbjct: 543 GVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPL 602
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M + C +G LG+ A+R+ +L+P
Sbjct: 603 KADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDP 637
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 255/502 (50%), Gaps = 39/502 (7%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P F N I + K GNL+ AR LF+EMP ++G +WN+M+ Y NG P + LF
Sbjct: 100 PHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFK 159
Query: 133 DMNHSGVS---ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
D++ + + + A V+ + L KQ+H IV + +L SSLV+ YG
Sbjct: 160 DLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYG 219
Query: 190 KCM-------------------------------VMTDARRMFDDIQNKNAVSWNVIVRR 218
KC M DARR+F N V WN ++
Sbjct: 220 KCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISG 279
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ EA+ +F M R+ ++ TFA+ L ACS L +G+Q+H + K+ F D
Sbjct: 280 YVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTND 339
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
++ +L +MY KC R +DA L + I S+++ Y+ GRI +AR++F+ MP
Sbjct: 340 IIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPS 399
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+++ISWN+M+ G++++ EALD M K +D+ +L +++ CA +S +++G+++
Sbjct: 400 KSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQI 459
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ +S +L+D Y KCG + R F +M + D+V WN++L GYA G
Sbjct: 460 FARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Query: 459 SEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN--VVCR 515
EA+ F +M+ +P+ TF +L+AC + +E+G++ + ++ Y IN +
Sbjct: 519 GIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWF-YAMKLDYHINPGIEHY 577
Query: 516 GALVEVYTKCCCLEYAIRVFKE 537
+V++Y + LE A+ + ++
Sbjct: 578 SCMVDLYARAGLLEDAMNLIEQ 599
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 225/522 (43%), Gaps = 112/522 (21%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
+ A L +C+ S Y G +H + +K + +G+ L +MY +C + +A+ L ++
Sbjct: 8 SLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR----------- 353
+RN SW +++ GY SG ++ ELF+ MP ++ SWN +++G+ +
Sbjct: 68 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 127
Query: 354 -SLLWKEALDFVFLMRKTT------------KDI----------DQVTLGLILNVCAGLS 390
+ WK + + ++ KD+ D L ++ C L
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR-----------------IW 433
+ GK++H I ++ + + ++L+++Y KCG++ SA I
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 434 FYQMSQRRDK-------------VSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-T 479
Y R + V WN++++GY ++ EA+ F+ M+ + + T
Sbjct: 248 GYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
F ++L+AC+ + ++QG Q+H V + + +++ ALV++Y+KC + A ++F +
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 540 SLDVIIC-------------------------------NSMILGFCHNERGREALEVFGL 568
+ D I+ NSMI+GF N EAL++F
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----CMIKLY 624
M K G++ D + G++ AC +++L Q F I LE + ++ Y
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIF-----ARATIIGLEFDQIISTSLVDFY 482
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
C+ G ++ +RM + VP + GYAT G
Sbjct: 483 CKCGLVEHGRKLFDRMMKSDEVPWNSMLM------GYATNGH 518
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 187/427 (43%), Gaps = 65/427 (15%)
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
++++ P F L+ I Y CG ++DAR +F WN+M+ Y N
Sbjct: 228 NHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEAL 287
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
LELF +M GV + T+A+VL + + + Q+H + K GF ++I++S+LV
Sbjct: 288 EALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALV 347
Query: 186 DAYGKC-----------------------MV--------MTDARRMFDDIQNKNAVSWNV 214
D Y KC M+ + DAR++FD + +K+ +SWN
Sbjct: 348 DMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNS 407
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ + EA+ +F +M + +R F+ A + AC+ +SS G QI I
Sbjct: 408 MIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIG 467
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E D ++ SL + Y KCG +E R L D+ + + + W S++ GYA +G EA +F+
Sbjct: 468 LEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFD 527
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+M V + D F+ +L+ C ++
Sbjct: 528 QMRSVGV-----------------QPTDITFVG--------------VLSACDHCGLVEE 556
Query: 395 GKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G++ + + DY N + + ++D+Y + G L A QM + D W++VL G
Sbjct: 557 GRKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRG 615
Query: 453 YARRGQS 459
G +
Sbjct: 616 CVAHGNN 622
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 35/317 (11%)
Query: 42 YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG---------- 91
YS +A + C++ I + ++ +++ T + + + ++ Y KC
Sbjct: 305 YSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFS 364
Query: 92 ---------------------NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+DDAR +FD MP + SWN+M+ ++QN P L+L
Sbjct: 365 DLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDL 424
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F +MN G+ ++ + A V+ + A L + +Q+ G + I+ +SLVD Y K
Sbjct: 425 FCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCK 484
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C ++ R++FD + + V WN ++ Y G+G EA+ +F +M ++P + TF
Sbjct: 485 CGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGV 544
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLDQ-PDE 307
L AC EG + +K+D+ + + + ++Y + G LEDA L++Q P +
Sbjct: 545 LSACDHCGLVEEGRKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLK 603
Query: 308 RNIISWTSIVSGYAISG 324
+ W+S++ G G
Sbjct: 604 ADTSMWSSVLRGCVAHG 620
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 325/632 (51%), Gaps = 34/632 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ QLCA SK++ + +++++ + L ++ Y CG+L +A +FDE+
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN ++ ++G ++ LF M SGV + T++ V +S + + +QLHG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K GF + +SLV Y K + AR++FD++ ++ +SWN I+ Y+ G ++
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ +F +ML I T + C+ G +H + +K F +D +L +
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L+ A+ + F EM +R+V+S+ +M
Sbjct: 340 MYSKCGDLDSAKAV-------------------------------FREMSDRSVVSYTSM 368
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+AGY R L EA+ M + D T+ +LN CA + GK VH +I ND
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+IFVSNAL+DMY KCG+++ A + F +M + +D +SWN ++ GY++ + EA++ F+
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 468 EMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+ E R P + T +L ACA++S+ ++G++IH +++RN Y + +LV++Y KC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
L A +F + +S D++ MI G+ + G+EA+ +F M++ GI+ D I+F +L
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V +FF+ MR + I P +EHY C++ + R G + + F+ MP P
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 667
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + CR + L E A ++ EL P
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 231/469 (49%), Gaps = 41/469 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T +VL+ A+ L K++ I GF + L S L Y C + +A R+FD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + A+ WN+++ +G+ ++ +F KM+ + ++TF+ + S L S + G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+HG I+K F + V SL Y+K R++ AR + D+ ER++ISW SI++GY +G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ +F +M +++G +ID T+ +
Sbjct: 276 LAEKGLSVFVQM----------LVSGI---------------------EIDLATIVSVFA 304
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA I +G+ VH + +S N LLDMY KCG+L SA+ F +MS R V
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVV 363
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
S+ +++ GYAR G + EA+ F EM+ E P +T +L CA L++GK++H ++
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
N ++ AL+++Y KC ++ A VF E D+I N++I G+ N EAL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 564 EVFGLMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+F L+ +E PD T +L AC +L FD R +G I
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACA-------SLSAFDKGREIHGYI 525
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y++ A + CA + + E +++ + +F+ N ++ Y KCG++ +A
Sbjct: 395 PDVYTVTA-VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEEL 157
+F EM +D SWN ++G Y++N + L LF L + S ++ T A VL + A
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+++HG I++ G+ + + +SLVD Y KC + A +FDDI +K+ VSW V++
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-IKIDFE 276
Y + G GKEA+ +F +M + I +F + L+ACS EG + ++ + E
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 277 GDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFN- 334
+ +M + G L A R + + P + W +++ G I ++ A ++
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 335 --EMPERNVISWNAMLAGYTRSLLWKE 359
E+ N + M Y + W++
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQ 720
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+R+V N L + S + A+ + + K DID TL +L +CA +K GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKW--DIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V FI N + + + + L MY CG+L+ A F ++ + + WN ++ A+ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK-ALFWNILMNELAKSG 174
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
++ F +M +TF + + +++ S+ G+Q+H F++++ +
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+LV Y K ++ A +VF E + DVI NS+I G+ N + L VF M GI+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 577 DHITFHGILLAC 588
D T + C
Sbjct: 295 DLATIVSVFAGC 306
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 315/615 (51%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
++ N + Y + L A +F M RDG S+N+++ Q GF R LELF M
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + IT A++L + A L QLH +K G ++ILE SL+D Y KC +
Sbjct: 356 DCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A + F + +N V WNV++ Y N ++ +F +M E + P FT+ + L C+
Sbjct: 416 AHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + Y G QIH +IK F+ + V L +MY K G+L
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL--------------------- 514
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A++ RI +PE +V+SW AM+AGY + ++ EAL M D
Sbjct: 515 ----ALALRI------LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ ++ CAG+ ++ G+++H + + +++ ++NAL+ +Y +CG ++ A + F +
Sbjct: 565 IGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+ + + +SWN++++G A+ G EEA+ F M + E + FT+ + ++A A++++++Q
Sbjct: 625 IGDK-NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQ 683
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+QIH V++ Y+ +L+ +Y K + A R F + S +VI N+MI G+
Sbjct: 684 GQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ 743
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G EAL +F MK GI P+H+TF G+L AC H G VK L +F+SM + ++P+ E
Sbjct: 744 HGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSE 803
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R G + +++ MP + R + C + +GE AA L EL
Sbjct: 804 HYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLEL 863
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 864 EPEDSATYVLISNIY 878
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/594 (24%), Positives = 277/594 (46%), Gaps = 35/594 (5%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y Y L + C +S ++ E +L + L++ ++ Y + G+ A +F
Sbjct: 57 NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVF 116
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS-AEELEL 159
DE R SWN M+ + + LF M G++ N T+A VL++ ++
Sbjct: 117 DENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAF 176
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
KQ+H GF + ++ + L+D Y K + A+++F+ I K+ V+W ++
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G +EA+++F M +I P + ++ L A + + G Q+H ++IK F +
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V L +Y + R +IS A +F+ M R
Sbjct: 297 YVCNGLVALYSR---------------SRKLIS----------------AERIFSTMNSR 325
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ +S+N++++G + AL+ M++ D +T+ +L+ CA + + G ++H
Sbjct: 326 DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLH 385
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S++I + +LLD+Y KC ++ +A F+ ++ + V WN +L Y +
Sbjct: 386 SHAIKAGMSADIILEGSLLDLYSKCADVETAHK-FFLTTETENIVLWNVMLVAYGQLDNL 444
Query: 460 EEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
++ F +MQ E P++FT+ ++L C ++ +L G+QIH VI+ +++NV L
Sbjct: 445 SDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 504
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y K L A+R+ + DV+ +MI G+ ++ EAL++F M+ GI+ D+
Sbjct: 505 IDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
I F + AC ++ Q + G L +I LY R G ++E
Sbjct: 565 IGFASAISACAGIRALRQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQE 617
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 33/452 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L CAS A+ + +L S+ + + + L ++ Y KC +++ A F
Sbjct: 366 ASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTET 425
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WN ML AY Q + E+F M G+ NQ TY ++LR+ L + +Q+
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQI 485
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++K GF NV + S L+D Y K + A R+ + + VSW ++ Y+
Sbjct: 486 HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMF 545
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ +F +M I+ N FA+A+ AC+ + + +G QIH F D + +L
Sbjct: 546 SEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNAL 605
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y +CGR+++A ++ ++N ISW S+VSG A SG EA ++F
Sbjct: 606 ISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF------------ 653
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M +T +++ T G ++ A L+ IK G+++H + +
Sbjct: 654 -------------------VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y S VSN+L+ +Y K G++ A F MS+ R+ +SWNA++TGY++ G EA+
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSE-RNVISWNAMITGYSQHGCGMEALRL 753
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
F EM+ P+ TF +L+AC++I +++G
Sbjct: 754 FEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 255/526 (48%), Gaps = 39/526 (7%)
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ ++L M GV +N Y +L L + +LH I K GF G +L SLV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
D Y + A ++FD+ N++ SWN ++ ++ + + +F +ML E I P +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 246 TFANALFACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
TFA L AC + + Q+H F+ +V L ++Y K
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK------------- 207
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+G I A+++FN + +++++W AM++G +++ L +EA+
Sbjct: 208 ------------------NGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M + L +L+ + ++G+++H + + + S +V N L+ +Y +
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
L SA F M+ R D VS+N++++G ++G S+ A+ F++MQ + +P T +L
Sbjct: 310 RKLISAERIFSTMNSR-DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASL 368
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+ACA++ +L +G Q+H I+ +++ G+L+++Y+KC +E A + F + + ++
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENI 428
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
++ N M++ + + ++ E+F M+ EG+ P+ T+ IL C G + L Q
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTH 488
Query: 604 MRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+ K G QL Y C +I +Y +YG + + R+P + V
Sbjct: 489 V-IKTGF--QLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 170/329 (51%), Gaps = 4/329 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C S A+ ++ ++++ V++ + I+ Y K G L A + +P
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E D SW AM+ Y Q+ L+LF +M + G+ + I +A+ + + A L +Q
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H GF ++ + ++L+ Y +C + +A F+ I +KN +SWN +V +G
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA+ +F +MLR + FT+ +A+ A + L++ +G QIH +++K ++ + V S
Sbjct: 646 FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERN 340
L +Y K G + DA + ERN+ISW ++++GY+ G EA LF EM N
Sbjct: 706 LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+++ +L+ + L KE LD+ M K
Sbjct: 766 HVTFVGVLSACSHIGLVKEGLDYFESMFK 794
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 146/304 (48%), Gaps = 14/304 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A CA +A+ + +++ + + + N I Y +CG + +A F+++
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+++ SWN+++ Q+G+ L++F+ M + N TY + + ++A + +Q
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++K G+ + +SL+ Y K ++DA R F+D+ +N +SWN ++ Y G
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G EA+ +F +M I P + TF L ACS + EG+ + KI D+V S
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKI----HDLVPKS 802
Query: 285 -----LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFN 334
+ ++ + G+L+ A + + P + + W +++S I I R A L
Sbjct: 803 EHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLE 862
Query: 335 EMPE 338
PE
Sbjct: 863 LEPE 866
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 315/615 (51%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
++ N + Y + L A +F M RDG S+N+++ Q GF R LELF M
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + IT A++L + A L QLH +K G ++ILE SL+D Y KC +
Sbjct: 356 DCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A + F + +N V WNV++ Y N ++ +F +M E + P FT+ + L C+
Sbjct: 416 AHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + Y G QIH +IK F+ + V L +MY K G+L
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL--------------------- 514
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A++ RI +PE +V+SW AM+AGY + ++ EAL M D
Sbjct: 515 ----ALALRI------LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ ++ CAG+ ++ G+++H + + +++ ++NAL+ +Y +CG ++ A + F +
Sbjct: 565 IGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+ + + +SWN++++G A+ G EEA+ F M + E + FT+ + ++A A++++++Q
Sbjct: 625 IGDK-NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQ 683
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+QIH V++ Y+ +L+ +Y K + A R F + S +VI N+MI G+
Sbjct: 684 GQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ 743
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G EAL +F MK GI P+H+TF G+L AC H G VK L +F+SM + ++P+ E
Sbjct: 744 HGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSE 803
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R G + +++ MP + R + C + +GE AA L EL
Sbjct: 804 HYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLEL 863
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 864 EPEDSATYVLISNIY 878
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/594 (24%), Positives = 277/594 (46%), Gaps = 35/594 (5%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y Y L + C +S ++ E +L + L++ ++ Y + G+ A +F
Sbjct: 57 NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVF 116
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS-AEELEL 159
DE R SWN M+ + + LF M G++ N T+A VL++ ++
Sbjct: 117 DENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAF 176
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
KQ+H GF + ++ + L+D Y K + A+++F+ I K+ V+W ++
Sbjct: 177 NYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGL 236
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G +EA+++F M +I P + ++ L A + + G Q+H ++IK F +
Sbjct: 237 SQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V L +Y + R +IS A +F+ M R
Sbjct: 297 YVCNGLVALYSR---------------SRKLIS----------------AERIFSTMNSR 325
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ +S+N++++G + AL+ M++ D +T+ +L+ CA + + G ++H
Sbjct: 326 DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLH 385
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S++I + +LLD+Y KC ++ +A F+ ++ + V WN +L Y +
Sbjct: 386 SHAIKAGMSADIILEGSLLDLYSKCADVETAHK-FFLXTETENIVLWNVMLVAYGQLDNL 444
Query: 460 EEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
++ F +MQ E P++FT+ ++L C ++ +L G+QIH VI+ +++NV L
Sbjct: 445 SDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 504
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y K L A+R+ + DV+ +MI G+ ++ EAL++F M+ GI+ D+
Sbjct: 505 IDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
I F + AC ++ Q + G L +I LY R G ++E
Sbjct: 565 IGFASAISACAGIRALRQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQE 617
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 223/452 (49%), Gaps = 33/452 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L CAS A+ + +L S+ + + + L ++ Y KC +++ A F
Sbjct: 366 ASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTET 425
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WN ML AY Q + E+F M G+ NQ TY ++LR+ L + +Q+
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQI 485
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++K GF NV + S L+D Y K + A R+ + + VSW ++ Y+
Sbjct: 486 HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMF 545
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ +F +M I+ N FA+A+ AC+ + + +G QIH F D + +L
Sbjct: 546 SEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNAL 605
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y +CGR+++A ++ ++N ISW S+VSG A SG EA ++F
Sbjct: 606 ISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF------------ 653
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M +T +++ T G ++ A L+ IK G+++H + +
Sbjct: 654 -------------------VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKT 694
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y S VSN+L+ +Y K G++ A F MS+ R+ +SWNA++TGY++ G EA+
Sbjct: 695 GYDSEREVSNSLISLYAKSGSISDAWREFNDMSE-RNVISWNAMITGYSQHGCGMEALRL 753
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
F EM+ P+ TF +L+AC++I +++G
Sbjct: 754 FEEMKVCGIMPNHVTFVGVLSACSHIGLVKEG 785
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 255/526 (48%), Gaps = 39/526 (7%)
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ ++L M GV +N Y +L L + +LH I K GF G +L SLV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
D Y + A ++FD+ N++ SWN ++ ++ + + +F +ML E I P +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 246 TFANALFACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
TFA L AC + + Q+H F+ +V L ++Y K
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK------------- 207
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+G I A+++FN + +++++W AM++G +++ L +EA+
Sbjct: 208 ------------------NGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M + L +L+ + ++G+++H + + + S +V N L+ +Y +
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
L SA F M+ R D VS+N++++G ++G S+ A+ F++MQ + +P T +L
Sbjct: 310 RKLISAERIFSTMNSR-DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASL 368
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+ACA++ +L +G Q+H I+ +++ G+L+++Y+KC +E A + F + + ++
Sbjct: 369 LSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENI 428
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
++ N M++ + + ++ E+F M+ EG+ P+ T+ IL C G + L Q
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTH 488
Query: 604 MRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+ K G QL Y C +I +Y +YG + + R+P + V
Sbjct: 489 V-IKTGF--QLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 170/329 (51%), Gaps = 4/329 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C S A+ ++ ++++ V++ + I+ Y K G L A + +P
Sbjct: 466 YPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP 525
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E D SW AM+ Y Q+ L+LF +M + G+ + I +A+ + + A L +Q
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H GF ++ + ++L+ Y +C + +A F+ I +KN +SWN +V +G
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA+ +F +MLR + FT+ +A+ A + L++ +G QIH +++K ++ + V S
Sbjct: 646 FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERN 340
L +Y K G + DA + ERN+ISW ++++GY+ G EA LF EM N
Sbjct: 706 LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+++ +L+ + L KE LD+ M K
Sbjct: 766 HVTFVGVLSACSHIGLVKEGLDYFESMFK 794
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 146/304 (48%), Gaps = 14/304 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A CA +A+ + +++ + + + N I Y +CG + +A F+++
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+++ SWN+++ Q+G+ L++F+ M + N TY + + ++A + +Q
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++K G+ + +SL+ Y K ++DA R F+D+ +N +SWN ++ Y G
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGC 746
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G EA+ +F +M I P + TF L ACS + EG+ + KI D+V S
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKI----HDLVPKS 802
Query: 285 -----LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFN 334
+ ++ + G+L+ A + + P + + W +++S I I R A L
Sbjct: 803 EHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLE 862
Query: 335 EMPE 338
PE
Sbjct: 863 LEPE 866
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 204/724 (28%), Positives = 350/724 (48%), Gaps = 78/724 (10%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+YA + Q C + ++ + LV FL +R +E Y + G ++DAR +FD+M
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ER+ SW A++ Y G T++LF M + GV + + V ++ +E V K
Sbjct: 151 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 164 QLHGLIVKRGF----------------CG---------------NVILESSLVDAYGKCM 192
++ ++ GF CG +V + + +V Y
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 193 VMTDARRMFDDIQ----NKNAVSWNVIVRRY----------------------------- 219
A + D++ + V+WN I+ Y
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 220 --LVAGNGK-----EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
L+AG+ + EA+ +F KM+ E ++P + T A+A+ AC+ LS G +IHG IK
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Query: 273 IDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
++ D+++G SL + Y KC +E AR + +++SW ++++GYA+ G EA E
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450
Query: 332 LFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
L +EM E ++I+WN ++ G+T+ K AL+F M D + T+ L C
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +K+GKE+HG++ RN + V +AL+ MY C +L A F ++S R D V WN
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWN 569
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++++ A+ G+S A+ EM + T + L AC+ +++L QGK+IH F+IR
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ +L+++Y +C ++ + R+F D++ N MI + + G +A+ +F
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
+ G+KP+HITF +L AC H G ++ ++F M+ +Y + P +E Y CM+ L R
Sbjct: 690 QXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G E +F+ +MPF P + + CR + L E+AAR L EL P + + +
Sbjct: 750 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLM 809
Query: 687 TNRF 690
N +
Sbjct: 810 ANIY 813
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 262/550 (47%), Gaps = 78/550 (14%)
Query: 116 GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
G+ +NG L M+ + YA++L+ + L + Q+H +V G
Sbjct: 62 GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
L S L++ Y + + DARRMFD + +N SW I+ Y G+ +E + +F+ M
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ E +RP +F F ACS L + G ++ ++ I FEG+ V GS+ +M++KCGR+
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 241
Query: 296 EDARGLLDQPDERNI-----------------------------------ISWTSIVSGY 320
+ AR ++ + +++ ++W +I+SGY
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301
Query: 321 AISGRIREARELFNEMP-----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A SG+ EA + F EM + NV+SW A++AG ++ EAL M +
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+T+ ++ C LS ++ G+E+HG+ I + S++ V N+L+D Y KC ++ AR F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---------------------- 472
M ++ D VSWNA+L GYA RG EEA+ SEM+++
Sbjct: 422 -GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480
Query: 473 --------------TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
P+ T LAAC + +L+ GK+IH +V+RN E++ AL
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSAL 540
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ +Y+ C LE A VF E S+ DV++ NS+I + R AL++ M ++ +
Sbjct: 541 ISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNT 600
Query: 579 ITFHGILLAC 588
+T L AC
Sbjct: 601 VTMVSALPAC 610
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 178/392 (45%), Gaps = 12/392 (3%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP----ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
N + Y G+ ++A L EM E D +WN ++ +TQ G LE F M+
Sbjct: 433 NAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHS 492
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ N T + L + + L + K++HG +++ + + S+L+ Y C +
Sbjct: 493 MGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEV 552
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F ++ ++ V WN I+ +G A+ + +M ++ T +AL ACS
Sbjct: 553 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 612
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L++ +G +IH II+ + + +L SL +MY +CG ++ +R + D +R+++SW +
Sbjct: 613 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 672
Query: 317 VSGYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+S Y + G +A LF + N I++ +L+ + S L +E + F M KT
Sbjct: 673 ISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY-FKMMKTEY 731
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+D V LS E FI + + N V +LL R N A
Sbjct: 732 AMDPAVEQYACMVDL-LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790
Query: 433 WFYQMSQRRDKVSWNAVLTG--YARRGQSEEA 462
+ + + S N VL Y+ G+ E+A
Sbjct: 791 AARYLFELEPQSSGNYVLMANIYSAAGRWEDA 822
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/654 (28%), Positives = 323/654 (49%), Gaps = 36/654 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P +Y+ + + CA A+ + ++ +++ N I+ Y + +LD AR
Sbjct: 171 QPDTYT-FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKAR 229
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F+EMP RD SWN+++ Y NG+ LE++ + GV + T ++VLR+
Sbjct: 230 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLG 289
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +HGLI K G +VI+ + L+ Y K + D RR+FD + ++AVSWN ++
Sbjct: 290 SVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMIC 349
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G +E++ +F +M+ + +P T + L AC L G +H +I +E
Sbjct: 350 GYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 408
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D L MY KCG L ++E+F+ M
Sbjct: 409 DTTASNILINMYAKCGNL-------------------------------LASQEVFSGMK 437
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ +SWN+M+ Y ++ + EA+ +F M KT D VT ++L++ L ++ +GKE
Sbjct: 438 CKDSVSWNSMINVYIQNGSFDEAMK-LFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKE 496
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + + ++SNI VSN L+DMY KCG + + F M + RD ++WN ++
Sbjct: 497 LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSE 555
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ S M+ E P T ++L C+ +++ QGK+IH + + E +V
Sbjct: 556 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 615
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+E+Y+KC L + +VFK + DV+ ++I G++A+ FG M+ GI P
Sbjct: 616 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 675
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
DH+ F I+ AC H G V+ L +F M+ Y I P++EHY C++ L R + + EDF
Sbjct: 676 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 735
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + + CR +G + + + R+ ELNP + + +N +
Sbjct: 736 ILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVY 789
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 269/547 (49%), Gaps = 34/547 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD- 101
+L++ + + AS+ + KL S ++T V + I Y + + +F
Sbjct: 73 TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 132
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
P + WN+++ A T NG L L+ + + + T+ +V+ + A L+ +
Sbjct: 133 ASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEM 192
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+K +H ++ GF ++ + ++L+D Y + + AR++F+++ ++ VSWN ++ Y
Sbjct: 193 AKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 252
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G EA+ ++++ + P ++T ++ L AC L S EG IHG+I KI + D +V
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 312
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L MY K L D R + D+ R+ +SW +++ GY+ G E+ +LF EM +
Sbjct: 313 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-- 370
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+K D +T+ IL C L +++ GK VH +
Sbjct: 371 ---------------FKP---------------DLLTITSILQACGHLGDLEFGKYVHDY 400
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + Y + SN L++MY KCGNL +++ F M + +D VSWN+++ Y + G +E
Sbjct: 401 MITSGYECDTTASNILINMYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDE 459
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
AM F M+ + +P T+ LL+ + L GK++HC + + + N+V LV++
Sbjct: 460 AMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDM 519
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC + +++VF+ + D+I N++I H+E L + M+ EG+ PD T
Sbjct: 520 YAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 579
Query: 582 HGILLAC 588
IL C
Sbjct: 580 LSILPVC 586
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 134/309 (43%), Gaps = 2/309 (0%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+K+D Y L + + ++L +L + + N ++ Y KCG +
Sbjct: 467 MKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEM 526
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D+ +F+ M RD +WN ++ + + L + M GV+ + T ++L
Sbjct: 527 GDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVC 586
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+ K++HG I K G +V + + L++ Y KC + ++ ++F ++ K+ V+W
Sbjct: 587 SLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWT 646
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIK 272
++ + G GK+AV F +M I P + F +FACS EG+ H +
Sbjct: 647 ALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKD 706
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRIREARE 331
E + ++ + L+ A +L P + + W +++S +SG A+
Sbjct: 707 YKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQR 766
Query: 332 LFNEMPERN 340
+ + E N
Sbjct: 767 VSERIIELN 775
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 5/297 (1%)
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
YT + L+ + + ++ + ++ Q I A + ++H I +
Sbjct: 50 YTSTKLFSRVMKTLRVLHECSR---QTLFSSISRALASAATTTQLHKLHSLIITLGLHHS 106
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+ S L+ Y + S+ F S + WN+++ G EA++ +SE Q
Sbjct: 107 VIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQ 166
Query: 471 -WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+P +TF +++ ACA + E K IH V+ + ++ AL+++Y + L+
Sbjct: 167 RIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLD 226
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A +VF+E DV+ NS+I G+ N EALE++ + G+ PD T +L AC
Sbjct: 227 KARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACG 286
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
G+V+ + K GI + ++ +YC++ + + ++M V
Sbjct: 287 GLGSVEEG-DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAV 342
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 8/189 (4%)
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ES 538
F ++ A A+ ++ Q ++H +I +V+ L+ Y + VF+ S
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
S +V NS+I HN EAL ++ ++ ++PD TF ++ AC + ++A
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
D + G L +I +YCR+ + + MP V I
Sbjct: 195 SIHDRV-LXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI------ 247
Query: 659 NGYATLGEW 667
+GY G W
Sbjct: 248 SGYNANGYW 256
>gi|255553249|ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 278/495 (56%), Gaps = 40/495 (8%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A L C SK++ + R++ + ++ VF+ NR I+ YGKCG DDAR +FD+
Sbjct: 20 SPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQ 79
Query: 103 MPER-------------------------------DGGSWNAMLGAYTQNGFPGRTLELF 131
MPE+ D SWN+++ + Q+ L F
Sbjct: 80 MPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYF 139
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ M+ G N+ T+ + L + A +L + Q+HGL++K F +V + S+L+D Y KC
Sbjct: 140 VKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKC 199
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ A+R+FD + +N VSWN ++ Y G +EA+ +F +M+ P T A+ +
Sbjct: 200 GFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVV 259
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNI 310
AC+ L++ +G++IH ++K D DD++L +L +MY KCGR+ +AR + D+ RN+
Sbjct: 260 SACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNV 319
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S TS+VSGYA + ++ AR LF +M ERNV+SWNA++AGYT++ +EAL ++++
Sbjct: 320 VSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNGENEEALRLFRMLKRE 379
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY------SSNIFVSNALLDMYRKC 424
T G +LN CA L+++++G++ H + ++ + S++FV NAL+DMY KC
Sbjct: 380 AICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKC 439
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
G++ F M + RD VSWNA++ GYA+ G EA+ F +M +P T
Sbjct: 440 GSVEEGCRIFENMVE-RDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGEKPDHVTMIGA 498
Query: 484 LAACANISSLEQGKQ 498
L AC++ +++G++
Sbjct: 499 LCACSHAGLVQEGRK 513
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 261/534 (48%), Gaps = 100/534 (18%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+A +L S + L ++++H I+K F V +++ L+DAYGKC DAR++FD +
Sbjct: 22 FAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMP 81
Query: 206 NKNAVSWNVIVRRY--------------------------LVAGNGK-----EAVVMFFK 234
KN SWN IV L+AG + EA+ F K
Sbjct: 82 EKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVK 141
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M R+ +TF + L AC+ L G QIHG+++K F D + +L ++Y KCG
Sbjct: 142 MHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGF 201
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
++ A+ +F+ M ERNV+SWN+++ Y ++
Sbjct: 202 VDCAQ-------------------------------RVFDGMMERNVVSWNSLITCYEQN 230
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFV 413
+EAL+ M ++ + D+VTL +++ CA L+ K G E+H + R+ ++ +
Sbjct: 231 GPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLIL 290
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQR------------------------------RDK 443
SNAL+DMY KCG + AR F +M R R+
Sbjct: 291 SNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNV 350
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA++ GY + G++EEA+ F ++ E P+ +TF LL ACAN++ L+ G+Q H
Sbjct: 351 VSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAH 410
Query: 503 VIRNCY------EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
V+++ + E +V AL+++Y KC +E R+F+ D + N+MI+G+ N
Sbjct: 411 VLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQN 470
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G EAL +F M G KPDH+T G L AC H G V+ + F SM +YG+
Sbjct: 471 GYGMEALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEGRKHFSSMTEEYGL 524
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 235/451 (52%), Gaps = 44/451 (9%)
Query: 232 FFKMLREDIRPLNFT-FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
F K + D+ L+ + FA L +C S + +IH IIK F + + L + Y
Sbjct: 6 FVKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYG 65
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG +DAR + DQ E+N+ SW +IVS SG + E LF MPE + SWN+++AG
Sbjct: 66 KCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAG 125
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ + ++EAL++ M + +++ T G L+ CAGL ++K+G ++HG + ++ + +
Sbjct: 126 FAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLD 185
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+++ +AL+D+Y KCG + A+ F M + R+ VSWN+++T Y + G S EA+ F M
Sbjct: 186 VYMGSALIDIYSKCGFVDCAQRVFDGMME-RNVVSWNSLITCYEQNGPSREALEIFMRMM 244
Query: 471 WET-RPSKFTFETLLAACANISSLEQGKQIH-CFVIRNCYEINVVCRGALVEVYTKCCCL 528
P + T ++++ACA++++ +QG +IH C V R+ +++ ALV++Y KC +
Sbjct: 245 ESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRI 304
Query: 529 EYAIRVF---------KESSSL----------------------DVIICNSMILGFCHNE 557
A VF E+S + +V+ N++I G+ N
Sbjct: 305 NEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQNG 364
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ-----FFDSMRCKYGIIP 612
EAL +F ++K+E I P H TF +L AC + +++L Q R +YG
Sbjct: 365 ENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEES 424
Query: 613 QLEHYECMIKLYCRYGYMKE----LEDFVNR 639
+ +I +Y + G ++E E+ V R
Sbjct: 425 DVFVGNALIDMYMKCGSVEEGCRIFENMVER 455
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 320/615 (52%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
F+ N I Y +C + A +F +M D ++N ++ + Q G R L +F +M
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG+S + +T A++L + + +L KQLH ++K G + I+E SL+D Y K + +
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE 297
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++FD N V WN+++ Y + ++ +F++ML +RP FT+ L C+
Sbjct: 298 ALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTH 357
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G QIH + IK F+ D V G L +MY K G L+ A+ +LD
Sbjct: 358 TGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDM------------ 405
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ E++V+SW +M+AGY + KEAL+ M+ D
Sbjct: 406 -------------------IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDN 446
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ L ++ CAG+ + G ++H ++ + YS+++ + N L+ +Y +CG + A F +
Sbjct: 447 IGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSF-E 505
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+ ++ ++WN +++G+A+ G EEA+ F +M Q + + FTF + ++A AN++ ++Q
Sbjct: 506 AIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQ 565
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GKQIH VI+ Y AL+ +Y KC +E A F E + + + N++I
Sbjct: 566 GKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQ 625
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ RG EAL++F MK++G+KP +TF G+L AC H G V+ L +F SM ++GI P+ +
Sbjct: 626 HGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPD 685
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ + R G + + FV MP + R + C+ + +GE+AA+ L EL
Sbjct: 686 HYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLEL 745
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 746 EPHDSASYVLLSNAY 760
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 264/561 (47%), Gaps = 41/561 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F+E+ RD SW A+L Y QNG + L+ +M+ SGV
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+++L + + + + +H + K+GF + ++L+ Y +C A R+
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ ++V++N ++ + G+G A+ +F +M + P + T A+ L ACS +
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H ++K D ++ GSL ++YVK G +E+A + D D N+
Sbjct: 261 RKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV---------- 310
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ WN ML Y + ++ D + M ++ T
Sbjct: 311 ---------------------VLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYP 349
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L C EI +G+++H +N + S+++VS L+DMY K G L A+ M +
Sbjct: 350 CMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQ-RILDMIEE 408
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
+D VSW +++ GY + +EA+ +F EMQ W P + ++ACA I ++ QG
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW---PDNIGLASAISACAGIKAVHQG 465
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH V + Y +V LV +Y +C + A F+ + I N +I GF +
Sbjct: 466 SQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQS 525
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL+VF M + G K + TF + A + ++K Q + K G + E
Sbjct: 526 GLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARV-IKTGYTSETEI 584
Query: 617 YECMIKLYCRYGYMKELE-DF 636
+I LY + G +++ + DF
Sbjct: 585 SNALISLYGKCGSIEDAKMDF 605
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 235/452 (51%), Gaps = 33/452 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L C++ + + ++L S L+ + + ++ Y K G++++A +FD
Sbjct: 248 ASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDR 307
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WN ML AY Q ++ ++F M +GV N+ TY +LR+ E+G+ +Q+
Sbjct: 308 TNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI 367
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L +K GF ++ + L+D Y K + A+R+ D I+ K+ VSW ++ Y+
Sbjct: 368 HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFC 427
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
KEA+ F +M I P N A+A+ AC+ + + ++G QIH + + D + L
Sbjct: 428 KEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGL 487
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y +CG ++A + + + I+W ++SG+A SG EA ++F +M +
Sbjct: 488 VYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQ------- 540
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AG ++ F F+ ++ A L++IK GK++H + +
Sbjct: 541 ---AGAKYNV-------FTFVSS--------------ISASANLADIKQGKQIHARVIKT 576
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y+S +SNAL+ +Y KCG++ A++ F++M+ +R++VSWN ++T ++ G+ EA+
Sbjct: 577 GYTSETEISNALISLYGKCGSIEDAKMDFFEMT-KRNEVSWNTIITCCSQHGRGLEALDL 635
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F +M Q +PS TF +L AC+++ +E+G
Sbjct: 636 FDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 173/324 (53%), Gaps = 3/324 (0%)
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++ YA G +R AR +F E+ R+ +SW A+L+GY ++ L +EA+ M ++
Sbjct: 83 LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPT 142
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
L IL+ C ++G+ +H +++ + S FV NAL+ +Y +C + R A F
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
M D V++N +++G+A+ G + A+ F EMQ P T +LLAAC+ + L
Sbjct: 203 DM-LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLR 261
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GKQ+H ++++ ++ + G+L+++Y K +E A+++F +V++ N M++ +
Sbjct: 262 KGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYG 321
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ ++ ++F M G++P+ T+ +L C H G + L Q S+ K G +
Sbjct: 322 QIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDM 380
Query: 615 EHYECMIKLYCRYGYMKELEDFVN 638
+I +Y +YG++ + + ++
Sbjct: 381 YVSGVLIDMYSKYGWLDKAQRILD 404
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 324/632 (51%), Gaps = 34/632 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ QLCA SK++ + +++++ + L ++ Y CG+L +A +FD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK 159
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN ++ ++G ++ LF M SGV + T++ V +S + + +QLHG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHG 219
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K GF + +SLV Y K + AR++FD++ ++ +SWN I+ Y+ G ++
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ +F +ML I T + C+ G +H +K F +D +L +
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L+ A+ +F EM R+V+S+ +M
Sbjct: 340 MYSKCGDLD-------------------------------SAKVVFREMSGRSVVSYTSM 368
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+AGY R L EA+ M + D T+ +LN CA + GK VH +I ND
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDM 428
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+IFVSNAL+DMY KCG++R A + F +M + +D +SWN V+ GY++ + EA++ F+
Sbjct: 429 GFDIFVSNALMDMYAKCGSMREAELVFSEM-RVKDIISWNTVIGGYSKNCYANEALSLFN 487
Query: 468 EMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+ E R P + T +L ACA++S+ ++G++IH +++RN Y + +LV++Y KC
Sbjct: 488 LLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
L A +F + +S D++ MI G+ + G+EA+ +F M++ GI+PD I+F +L
Sbjct: 548 GALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLL 607
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V +FF+ MR + I P +EHY C++ + R G + + F+ MP P
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPD 667
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + CR + L E A ++ EL P
Sbjct: 668 ATIWGALLCGCRIHHDVKLAERVAEKVFELEP 699
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 228/469 (48%), Gaps = 41/469 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T +VL+ A+ L K++ I GF + L S L Y C + +A R+FD +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + A+ WN+++ +G+ ++ +F KM+ + ++TF+ + S L S G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGE 215
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+HG I+K F + V SL Y+K R++ AR + D+ ER++ISW SI++GY +G
Sbjct: 216 QLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ +F +M + +G +ID T+ +
Sbjct: 276 LAEKGLSVFVQM----------LFSGI---------------------EIDLATIVSVFA 304
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA I +G+ VH F + +S N LLDMY KCG+L SA++ F +MS R V
Sbjct: 305 GCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSG-RSVV 363
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
S+ +++ GYAR G + EA+ F EM+ E P +T +L CA L++GK++H ++
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
N ++ AL+++Y KC + A VF E D+I N++I G+ N EAL
Sbjct: 424 KENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEAL 483
Query: 564 EVFGLMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+F L+ E PD T +L AC +L FD R +G I
Sbjct: 484 SLFNLLLVEKRFSPDERTVACVLPACA-------SLSAFDKGREIHGYI 525
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+R+V N L + S K A+ + + K DID TL +L +CA +K GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKW--DIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V FI N + + + + L MY CG+L+ A F Q+ + + WN ++ A+ G
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK-ALFWNILMNELAKSG 174
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
++ F +M +TF + + +++ S+ G+Q+H +++++ +
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGN 234
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+LV Y K ++ A +VF E + DVI NS+I G+ N + L VF M GI+
Sbjct: 235 SLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEI 294
Query: 577 DHITFHGILLAC 588
D T + C
Sbjct: 295 DLATIVSVFAGC 306
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/636 (29%), Positives = 318/636 (50%), Gaps = 24/636 (3%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNH 136
+ + A+ Y +CG +A L + WNA++ + G TL + M
Sbjct: 61 MFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G + T+ VL++ E L +H ++ G NV + +S+V YG+C + D
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDD 180
Query: 197 ARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE---DIRPLNFTFANA 250
A +MFD++ + + VSWN I+ Y+ G + A+ + F+M +RP T N
Sbjct: 181 AHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNI 240
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC+ + + G Q+HG ++ D V +L MY KC ++ +A + + ++++
Sbjct: 241 LPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDV 300
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERN----VISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++V+GY+ G A LF M E + VI+W+A++AGY + EALD
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-------DYSSNIFVSNALLD 419
M+ + + VTL +L+ CA + + GK+ H ++ +N D ++ V N L+D
Sbjct: 361 MQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLID 420
Query: 420 MYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYARRGQSEEAMTSFSEM---QWETRP 475
MY KC + R AR F + + ++ V+W ++ GYA+ G++ +A+ F+++ + +P
Sbjct: 421 MYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKP 480
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKCCCLEYAIRV 534
+ FT L ACA + L G+Q+H + +RN E V+ G L+++Y+K ++ A V
Sbjct: 481 NAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAV 540
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F +V+ S++ G+ + RG EAL +F M+K G D ITF +L AC H G V
Sbjct: 541 FDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMV 600
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ +F M +GI P EHY CM+ L R G + E + + M PT + +
Sbjct: 601 DQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLS 660
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
R + LGE+AA +L EL + + +N +
Sbjct: 661 ASRIHANIELGEYAASKLTELGAENDGSYTLLSNLY 696
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 205/490 (41%), Gaps = 92/490 (18%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS A+ +++ V VF+ N + Y KC +++A +F+ + ++D SW
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSW 303
Query: 112 NAML-----------------------------------GAYTQNGFPGRTLELFLDMNH 136
NAM+ Y Q G L++F M
Sbjct: 304 NAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQL 363
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN-------VILESSLVDAYG 189
G+ N +T A++L A L KQ H ++K N +++ + L+D Y
Sbjct: 364 YGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYA 423
Query: 190 KCMVMTDARRMFDDIQ--NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE--DIRPLNF 245
KC AR +FD I+ +KN V+W V++ Y G +A+ +F ++ ++ ++P F
Sbjct: 424 KCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAF 483
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
T + AL AC+ L G Q+H ++ + E + + +G+ L +MY K G ++ AR + D
Sbjct: 484 TLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDN 543
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
RN++SWTS+++GY + GR EA LF++M + L F
Sbjct: 544 MKLRNVVSWTSLMTGYGMHGRGEEALHLFDQM----------------------QKLGFA 581
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------LL 418
+D +T ++L C+ G G I+ +D ++ ++
Sbjct: 582 ---------VDGITFLVVLYACS-----HSGMVDQGMIYFHDMVKGFGITPGAEHYACMV 627
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG---YARRGQSEEAMTSFSEMQWETRP 475
D+ + G L A MS V W A+L+ +A E A + +E+ E
Sbjct: 628 DLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDG 687
Query: 476 SKFTFETLLA 485
S L A
Sbjct: 688 SYTLLSNLYA 697
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 303/597 (50%), Gaps = 100/597 (16%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR----- 217
+ +H ++K GF + +++ L+DAY KC + D R++FD + +N +WN +V
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 218 ---------------------RYLVAGNGK----EAVVMFFKMLREDIRPLN-FTFANAL 251
+V+G + E + +F M+ ++ LN ++FA+ L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
ACS L+ +G+Q+H +I K F D + +L +MY KCG + D
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND-------------- 205
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
A+ +F+EM +RNV+SWN+++ + ++ EALD +M ++
Sbjct: 206 -----------------AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR 248
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSA 430
+ D+VTL +++ CA LS IK+G+EVHG + +ND N I +SNA +DMY KC ++ A
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA 308
Query: 431 RIWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSE 460
R F M R R+ VSWNA++ GY + G++E
Sbjct: 309 RFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 461 EAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY------EINVV 513
EA++ F ++ E+ P+ ++F +L ACA+++ L G Q H V+++ + E ++
Sbjct: 369 EALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIF 428
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+L+++Y KC C+E VF++ D + N+MI+GF N G EALE+F M + G
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
KPDHIT G+L AC H G V+ +F SM +G+ P +HY CM+ L R G+++E
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + MP P + + C+ + TLG++ A +L E+ P + + +N +
Sbjct: 549 KSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMY 605
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 276/504 (54%), Gaps = 41/504 (8%)
Query: 43 SLYAHLFQLCASSK-AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
S +A L C SK + + R + ++++ + +F+ NR I+ Y KCG+L+D R +FD
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 102 EMP-------------------------------ERDGGSWNAMLGAYTQNGFPGRTLEL 130
+MP ERD +WN+M+ + Q+ L
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M+ G N+ ++A+VL + + ++ Q+H LI K F +V + S+LVD Y K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + DA+R+FD++ ++N VSWN ++ + G EA+ +F ML + P T A+
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERN 309
+ AC+ LS+ G ++HG ++K D +D++L + +MY KC R+++AR + D RN
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+I+ TS++SGYA++ + AR +F +M ERNV+SWNA++AGYT++ +EAL L+++
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEV------HGFIHRNDYSSNIFVSNALLDMYRK 423
+ + IL CA L+E+ +G + HGF ++ +IFV N+L+DMY K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG + + F +M + RD VSWNA++ G+A+ G EA+ F EM + +P T
Sbjct: 440 CGCVEEGYLVFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 483 LLAACANISSLEQGKQIHCFVIRN 506
+L+AC + +E+G+ + R+
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRD 522
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 215/389 (55%), Gaps = 39/389 (10%)
Query: 247 FANALFAC--SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FA L +C S LS+ Y +H +IK F + + L + Y KCG LED R + D+
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+RNI +W S+V+G G + EA LF MPER+ +WN+M++G+ + +EAL +
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
+M K +++ + +L+ C+GL+++ G +VH I ++ + S++++ +AL+DMY KC
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFET 482
GN+ A+ F +M R+ VSWN+++T + + G + EA+ F +M E+R P + T +
Sbjct: 201 GNVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLAS 258
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEIN-VVCRGALVEVYTKCCCLEYA--------IR 533
+++ACA++S+++ G+++H V++N N ++ A V++Y KC ++ A IR
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 534 -----------------------VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+F + + +V+ N++I G+ N EAL +F L+K
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQ 599
+E + P H +F IL AC + L +Q
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQ 407
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 279/524 (53%), Gaps = 10/524 (1%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD--AYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRR 218
KQ+H LI+K G + +S L++ A ++ A +F I Q N WN ++R
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + ++ +F +ML + P + TF + +C+ + +E Q+H +K+
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL MY + G L AR + D+ R+ +S+T++++GY G + +AR LF+E+P
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SWNAM+AGY +S ++EAL M++ +Q T+ +L+ C L +++GK +
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
++ + N+ + NAL+DMY KCG + +AR F M + +D + WN ++ GY
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM-EDKDVILWNTMIGGYCHLSL 340
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI----NVV 513
EEA+ F M E P+ TF +L ACA++ +L+ GK +H ++ +N NV
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+++ +Y KC C+E A +VF+ S + N+MI G N AL +F M EG
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
+PD ITF G+L AC G V+L ++F SM YGI P+L+HY CMI L R G E
Sbjct: 461 FQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA 520
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + M P + + + CR +G GE+ A RL EL P
Sbjct: 521 KVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEP 564
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 214/491 (43%), Gaps = 72/491 (14%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESN 67
I ++ S PTP+ +L S L S + + LF+ CA SKA EA++L ++
Sbjct: 94 IWNTLIRAHSLTPTPTSSL-HLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAH 152
Query: 68 LVTF----YPTPPVFLLN---------------------------RAIECYGKCGNLDDA 96
+ +P L++ I Y G++DDA
Sbjct: 153 ALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDA 212
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
R LFDE+P +D SWNAM+ Y Q+G L F M + VS NQ T +VL +
Sbjct: 213 RRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHL 272
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L + K + + RGF N+ L ++LVD Y KC + AR++FD +++K+ + WN ++
Sbjct: 273 RSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMI 332
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y +EA+V+F MLRE++ P + TF L AC+ L + G +H I K + +
Sbjct: 333 GGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK-NLK 391
Query: 277 G----DDVVL-GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
G ++V L S+ MY KCG +E A + R++ SW +++SG A++G A
Sbjct: 392 GTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALG 451
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF EM D +T +L+ C
Sbjct: 452 LFEEMINEGF-------------------------------QPDDITFVGVLSACTQAGF 480
Query: 392 IKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+++G +++ DY S + ++D+ + G A++ M D W ++
Sbjct: 481 VELGHRYFSSMNK-DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSL 539
Query: 450 LTGYARRGQSE 460
L GQ E
Sbjct: 540 LNACRIHGQVE 550
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 185/424 (43%), Gaps = 68/424 (16%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ A++ P +L LF M HSG+ N T+ ++ +S A+ +KQLH +
Sbjct: 95 WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154
Query: 171 KRGFCGNVILESSLVDAYGKCMVM-------------------------------TDARR 199
K + + +SL+ Y + + DARR
Sbjct: 155 KLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARR 214
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD+I K+ VSWN ++ Y+ +G +EA+ F +M D+ P T + L AC L S
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS 274
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G I + F + ++ +L +MY KCG + AR L D +++++I W +++ G
Sbjct: 275 LELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y EA LF M NV + VT
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTP-------------------------------NDVTF 363
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSS----NIFVSNALLDMYRKCGNLRSARIWFY 435
+L CA L + +GK VH +I +N + N+ + +++ MY KCG + A F
Sbjct: 364 LAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFR 423
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
M R SWNA+++G A G +E A+ F EM E +P TF +L+AC +E
Sbjct: 424 SMGS-RSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVE 482
Query: 495 QGKQ 498
G +
Sbjct: 483 LGHR 486
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+N ++ Y KCG + AR LFD M ++D WN M+G Y L LF M
Sbjct: 296 LVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLREN 355
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKR----GFCGNVILESSLVDAYGKCMVM 194
V+ N +T+ VL + A L + K +H I K G NV L +S++ Y KC +
Sbjct: 356 VTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCV 415
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A ++F + +++ SWN ++ + G+ + A+ +F +M+ E +P + TF L AC
Sbjct: 416 EVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSAC 475
Query: 255 SFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD- 306
+ G + +G+ K+ G + ++ + G+ ++A+ L+ +
Sbjct: 476 TQAGFVELGHRYFSSMNKDYGISPKLQH------YGCMIDLLARSGKFDEAKVLMGNMEM 529
Query: 307 ERNIISWTSIVSGYAISGRIR----EARELFNEMPERN 340
E + W S+++ I G++ A LF PE +
Sbjct: 530 EPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENS 567
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM--YRKCGNLRSARIWFYQMSQR 440
LN+ A +I K++H I ++ + +F + L++ +L A F+ + +
Sbjct: 29 LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88
Query: 441 RDKV-SWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ WN ++ ++ ++ FS+M P+ TF +L +CA + + KQ
Sbjct: 89 PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEY---------------------------- 530
+H ++ ++ +L+ +Y++ L +
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208
Query: 531 ---AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
A R+F E + DV+ N+MI G+ + R EAL F M++ + P+ T +L A
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
C H +++L ++ S G L+ ++ +Y + G
Sbjct: 269 CGHLRSLELG-KWIGSWVRDRGFGKNLQLVNALVDMYSKCG 308
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 303/602 (50%), Gaps = 35/602 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF N + Y CG DAR +FDEMP RD SWN+++ A NG + M
Sbjct: 154 VFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMR 213
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SGV N + ++L + E + G +HGL++K G V L ++LVD YGK +
Sbjct: 214 SGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLES 273
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ +F+ +Q KN VSWN + + AG ++ + MF M D+ P + T ++ L A
Sbjct: 274 SMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVD 333
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + G ++HG I+ E D + +L +MY K G E
Sbjct: 334 LGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSE-------------------- 373
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+A +F + RNV+SWNAM+A T++ EA V M+K + +
Sbjct: 374 -----------KASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNS 422
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
TL +L C+ ++ +KMGK++H + R S++FVSNAL+D+Y KCG L AR F +
Sbjct: 423 FTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR 482
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
+D VS+N ++ GY++ E++ F +M+ +F L+AC+N+S+ +Q
Sbjct: 483 --SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQ 540
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IH +++ + + +L++VYTK L+ A ++F + DV N+MILG+
Sbjct: 541 GKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGM 600
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + A E+F LMK +GI+ DH+++ +L C H G V ++F M + I PQ
Sbjct: 601 HGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQM 659
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G + E + + MPF + + CR +G L AA L EL
Sbjct: 660 HYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFEL 719
Query: 676 NP 677
P
Sbjct: 720 KP 721
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 251/560 (44%), Gaps = 55/560 (9%)
Query: 43 SLYAHLFQL-CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
SL+ H+ +L C S ++ R ++LV+ T L + Y ++ A +
Sbjct: 14 SLHEHVLRLHCGGS--LLLRRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILR 71
Query: 102 EMP--ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY---------ANVL 150
P R WN++ A P L ++ M SGV + T+
Sbjct: 72 HHPFRLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQA 131
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
A+ EL + GL++ F GN +LV Y C DARR+FD++ ++ V
Sbjct: 132 EHPAKGAELHAAALRRGLLLADVFAGN-----TLVTFYAVCGRAADARRVFDEMPARDVV 186
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGV 269
SWN +V L G ++A M+R + P+N + + L AC G+ +HG+
Sbjct: 187 SWNSLVSALLTNGMLEDAKRAVVGMMRSGV-PVNVASLVSILPACGTERDEGFGLCVHGL 245
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
++K + +L +MY K G LE + + + E+N +SW S + +A +G +
Sbjct: 246 VLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDV 305
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
E+F M E +V VTL +L L
Sbjct: 306 LEMFRLMSEHDVTP-------------------------------GSVTLSSLLPALVDL 334
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+GKE+HG+ R S+IF++N L+DMY K G A F + + R+ VSWNA+
Sbjct: 335 GYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENI-EVRNVVSWNAM 393
Query: 450 LTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ + G EA EMQ P+ FT LL AC+ ++S++ GKQIH + IR
Sbjct: 394 IANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSL 453
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
++ AL++VY KC L A +F S D + N++I+G+ ++ E+L +F
Sbjct: 454 MSDLFVSNALIDVYAKCGQLNLARYIFDRSEK-DGVSYNTLIVGYSQSQCCFESLHLFQQ 512
Query: 569 MKKEGIKPDHITFHGILLAC 588
M+ GI+ D ++F G L AC
Sbjct: 513 MRLAGIEHDAVSFMGCLSAC 532
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 232/472 (49%), Gaps = 34/472 (7%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
+ + G ++S PV+ + + C + + + ++ F V L N ++ Y
Sbjct: 206 RAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMY 265
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
GK G+L+ + +F+ M E++ SWN+ +G + GF LE+F M+ V+ +T +
Sbjct: 266 GKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLS 325
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L + + + K+LHG ++R ++ + ++L+D Y K A +F++I+ +
Sbjct: 326 SLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVR 385
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N VSWN ++ G EA + +M + P +FT N L ACS ++S G QIH
Sbjct: 386 NVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIH 445
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
I+ D V +L ++Y KCG+L AR + D+ E++ +S+ +++ GY+ S
Sbjct: 446 AWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCF 504
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
E+ LF +M LAG D V+ L+ C+
Sbjct: 505 ESLHLFQQM----------RLAGIEH---------------------DAVSFMGCLSACS 533
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
LS K GKE+HG + + S+ F++N+LLD+Y K G L +A F +++Q +D SWN
Sbjct: 534 NLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQ-KDVASWN 592
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
++ GY GQ + A F M+ + ++ +L+ C++ +++GK+
Sbjct: 593 TMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKK 644
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 215/464 (46%), Gaps = 54/464 (11%)
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF---ANALFACSFLSSPYEG 263
++A WN + R A EA+ ++ +M+R +RP + TF +A A + P +G
Sbjct: 78 RSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKG 137
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++H ++ RGLL ++ + ++V+ YA+
Sbjct: 138 AELHAAALR--------------------------RGLL----LADVFAGNTLVTFYAVC 167
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
GR +AR +F+EMP R+V+SWN++++ + + ++A V M ++ ++ +L IL
Sbjct: 168 GRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSIL 227
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C + G VHG + + +S + + NAL+DMY K G+L S+ F M Q +++
Sbjct: 228 PACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGM-QEKNE 286
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWN+ + +A G E+ + F M + + P T +LL A ++ GK++H +
Sbjct: 287 VSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGY 346
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
IR E ++ L+++Y K C E A +F+ +V+ N+MI N EA
Sbjct: 347 SIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEA 406
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ M+K G P+ T +L AC +VK+ Q + + ++ L +I
Sbjct: 407 FRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQ-IHAWSIRRSLMSDLFVSNALID 465
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG--YATL 664
+Y + G + + R IFD+ K+G Y TL
Sbjct: 466 VYAKCGQLN----------------LARYIFDRSEKDGVSYNTL 493
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 322/644 (50%), Gaps = 29/644 (4%)
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
P L + Y CG D A + + + WN ++ + + G + + M
Sbjct: 95 PRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRML 154
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+G + T +VL++ E HGLI GF NV + ++LV Y +C +
Sbjct: 155 RAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 214
Query: 196 DARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLN-----FT 246
+A +FD+I + + +SWN IV ++ + N A+ +F KM L +P N +
Sbjct: 215 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 274
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
N L AC L + + ++HG I+ D V +L + Y KCG +E+A + + +
Sbjct: 275 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERN----VISWNAMLAGYTRSLLWKEALD 362
++++SW ++V+GY+ SG A ELF M + N V++W A++AGY++ EAL+
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-------DYSS---NIF 412
M + + VT+ +L+ CA L G E+H + +N D+ ++
Sbjct: 395 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 454
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V NAL+DMY KC + ++AR F + + R+ V+W ++ G+A+ G S +A+ F EM
Sbjct: 455 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 514
Query: 472 E---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YEINV-VCRGALVEVYTKCC 526
E P+ +T +L ACA+++++ GKQIH +V+R+ YE + L+++Y+KC
Sbjct: 515 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 574
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
++ A VF S I SM+ G+ + RG EAL++F M+K G PD ITF +L
Sbjct: 575 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 634
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G V L +FDSM YG+ P+ EHY C I L R G + + V MP PT
Sbjct: 635 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTA 694
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + CR + L E A +L E+N + + +N +
Sbjct: 695 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 738
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 324/663 (48%), Gaps = 45/663 (6%)
Query: 69 VTFYPTP------PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
V P P P L + Y CG DA + + + WN ++ + + G
Sbjct: 69 VPLAPLPSHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEG 128
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
R + + M +G + T L++ E + LHGLI GF NV + +
Sbjct: 129 HLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCN 188
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKML--- 236
+LV Y +C + DA +FD+I K + +SWN IV ++ N + A+ +F +M
Sbjct: 189 ALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIV 248
Query: 237 -------REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
R DI + N L AC+ L + + +IH I+ D V +L + Y
Sbjct: 249 HEKATNERSDI----ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTY 304
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN----VISWN 345
KCG + DA + + + ++++SW ++V+GY SG A ELF M + N VI+W+
Sbjct: 305 AKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWS 364
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
A++AGY + +EALD M + + VT+ +L+ CA L + G E+H + +
Sbjct: 365 AVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKK 424
Query: 406 DYSS------------NIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTG 452
S ++ V NAL+DMY KC + ++AR F + +R R+ V+W ++ G
Sbjct: 425 CLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGG 484
Query: 453 YARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-Y 508
YA+ G S +A+ FSEM + P+ +T +L ACA++++L GKQIH +V R+ Y
Sbjct: 485 YAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEY 544
Query: 509 EINV-VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E +V L+++Y+KC ++ A VF + + SM+ G+ + RG+EAL++F
Sbjct: 545 EPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFD 604
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M+K G PD I+F +L AC H G V L +FD MR Y ++ EHY C+I L R
Sbjct: 605 KMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARC 664
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G + + + MP P+ + + CR + L E+A +L + + + +
Sbjct: 665 GRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLIS 724
Query: 688 NRF 690
N +
Sbjct: 725 NIY 727
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 57/380 (15%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
++ CAS KA+ + +++ S + F+ N I+ Y KCG+++DA +F+ M +
Sbjct: 264 NILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFK 323
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE---------- 156
D SWNAM+ YTQ+G G ELF +M + + IT++ V+ A+
Sbjct: 324 DVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAF 383
Query: 157 ----------------------LELGVSKQ---LHGLIVKRGFCG------------NVI 179
LG Q +H +K+ +++
Sbjct: 384 QQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLM 443
Query: 180 LESSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ ++L+D Y KC AR +FD I + +N V+W V++ Y G+ +A+ +F +M+
Sbjct: 444 VYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMIS 503
Query: 238 ED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV--VLGSLTEMYVKCG 293
+ + P +T + L AC+ L++ G QIH + + V V L +MY KCG
Sbjct: 504 KPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCG 563
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLA 349
++ AR + D +RN +SWTS++SGY + GR +EA ++F++M + IS+ +L
Sbjct: 564 DVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLY 623
Query: 350 GYTRSLLWKEALDFVFLMRK 369
+ S + + L++ +MR+
Sbjct: 624 ACSHSGMVDQGLNYFDIMRR 643
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPP--VFLLNRAIECYGKCGNLDDA 96
P +Y++ + + CA A+ +++ + + + P F+ N I+ Y KCG++D A
Sbjct: 510 PNAYTI-SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTA 568
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
R +FD MP+R+ SW +M+ Y +G L++F M +G + I++ +L
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 322/644 (50%), Gaps = 29/644 (4%)
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
P L + Y CG D A + + + WN ++ + + G + + M
Sbjct: 88 PRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRML 147
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+G + T +VL++ E HGLI GF NV + ++LV Y +C +
Sbjct: 148 RAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 207
Query: 196 DARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLN-----FT 246
+A +FD+I + + +SWN IV ++ + N A+ +F KM L +P N +
Sbjct: 208 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 267
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
N L AC L + + ++HG I+ D V +L + Y KCG +E+A + + +
Sbjct: 268 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERN----VISWNAMLAGYTRSLLWKEALD 362
++++SW ++V+GY+ SG A ELF M + N V++W A++AGY++ EAL+
Sbjct: 328 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-------DYSS---NIF 412
M + + VT+ +L+ CA L G E+H + +N D+ ++
Sbjct: 388 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 447
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V NAL+DMY KC + ++AR F + + R+ V+W ++ G+A+ G S +A+ F EM
Sbjct: 448 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 507
Query: 472 E---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YEINV-VCRGALVEVYTKCC 526
E P+ +T +L ACA+++++ GKQIH +V+R+ YE + L+++Y+KC
Sbjct: 508 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 567
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
++ A VF S I SM+ G+ + RG EAL++F M+K G PD ITF +L
Sbjct: 568 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 627
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G V L +FDSM YG+ P+ EHY C I L R G + + V MP PT
Sbjct: 628 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTA 687
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + CR + L E A +L E+N + + +N +
Sbjct: 688 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 731
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 316/615 (51%), Gaps = 34/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ N ++ Y + G L AR +FDEMP RD SWN+++ Y+ +G+ LE++ ++ +
Sbjct: 141 LYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRN 200
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S + + T ++VL + A L + + LHG +K G ++ + L+ Y K TD
Sbjct: 201 SWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTD 260
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD++ +++V++N ++ YL +E+V MF + L + +P T + L AC
Sbjct: 261 ARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENL-DQFKPDILTVTSVLCACGH 319
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L I+ +++ F + V L ++Y KCG ++I+
Sbjct: 320 LRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCG---------------DMIT---- 360
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
AR++FN M ++ +SWN++++GY +S EA+ +M + D
Sbjct: 361 ------------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T +++++ L+++K GK +H ++ ++ VSNAL+DMY KCG + + F
Sbjct: 409 ITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNS 468
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQ 495
M D V+WN V++ R G + ++M+ + P TF L CA++++
Sbjct: 469 MGTL-DTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRL 527
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IHC ++R YE + AL+E+Y+KC CLE + RVF+ S DV+ MI +
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGM 587
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
G +ALE F M+K GI PD + F ++ AC H G V+ L F+ M+ Y I P +E
Sbjct: 588 YGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIE 647
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R + + E+F+ MP P + + CR +G E +RR+ EL
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 676 NPWAPFQFKITTNRF 690
NP P + +N +
Sbjct: 708 NPDDPGYSILASNAY 722
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/597 (23%), Positives = 289/597 (48%), Gaps = 36/597 (6%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM-P 104
A + + +SS + E R++ + +++ F + I+ Y + +F + P
Sbjct: 8 AFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSP 67
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ WN+++ A+++NG+ + LE + + S VS ++ T+ +V+++ A + +
Sbjct: 68 AKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
++ I++ GF ++ + ++LVD Y + +++ AR++FD++ ++ VSWN ++ Y G
Sbjct: 128 VYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA+ ++ ++ I P +FT ++ L A + L +G +HG +K VV
Sbjct: 188 YEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNG 247
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+K R DAR + D+ R+ +++ +++ GY + E+ ++F E N+ +
Sbjct: 248 LLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE----NLDQF 303
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
D +T+ +L C L ++ + K ++ ++ R
Sbjct: 304 KP----------------------------DILTVTSVLCACGHLRDLSLAKYIYNYMLR 335
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ V N L+D+Y KCG++ +AR F M + +D VSWN++++GY + G EAM
Sbjct: 336 AGFVLESTVKNILIDVYAKCGDMITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 465 SFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M E + T+ L++ ++ L+ GK +H I++ I++ AL+++Y
Sbjct: 395 LFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYA 454
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + ++++F +LD + N++I L+V M+K + PD TF
Sbjct: 455 KCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLV 514
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
L C +L + + ++G +L+ +I++Y + G ++ RM
Sbjct: 515 TLPMCASLAAKRLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLESSFRVFERM 570
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 232/506 (45%), Gaps = 34/506 (6%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+++ A + R+ + L +++H L++ G G+ L+D Y + +F
Sbjct: 3 TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62
Query: 202 DDIQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
+ KN WN I+R + G +A+ + K+ + P +TF + + AC+ L
Sbjct: 63 RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G ++ I+++ FE D V +L +MY + G L
Sbjct: 123 EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLS------------------------ 158
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
AR++F+EMP R+++SWN++++GY+ ++EAL+ +R + D T+
Sbjct: 159 -------RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVS 211
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L A L +K G+ +HGF ++ +S V+N LL MY K AR F +M
Sbjct: 212 SVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVV- 270
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIH 500
RD V++N ++ GY + EE++ F E + +P T ++L AC ++ L K I+
Sbjct: 271 RDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIY 330
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+++R + + + L++VY KC + A VF D + NS+I G+ +
Sbjct: 331 NYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLM 390
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EA+++F +M + DHIT+ ++ ++K + S K GI L +
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFG-KGLHSNGIKSGIYIDLSVSNAL 449
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTV 646
I +Y + G + + N M TV
Sbjct: 450 IDMYAKCGEVGDSLKIFNSMGTLDTV 475
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 167/383 (43%), Gaps = 32/383 (8%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
+E + Y L L + + L SN + + + N I+ Y KCG + D+
Sbjct: 403 EEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDS 462
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ M D +WN ++ A + G L++ M + V + T+ L A
Sbjct: 463 LKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASL 522
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ K++H +++ G+ + + ++L++ Y KC + + R+F+ + ++ V+W ++
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMI 582
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI----IK 272
Y + G G++A+ F M + I P + F ++ACS + G+ G+ +K
Sbjct: 583 YAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACS-----HSGLVEKGLACFEKMK 637
Query: 273 IDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREA 329
++ D ++ + ++ + ++ A + P E + W S++ SG + A
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETA 697
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEAL------DFVFLMRKTTKDIDQVTLGLIL 383
E R +I N GY S+L A D V L+RK+ +D +
Sbjct: 698 -----ERVSRRIIELNPDDPGY--SILASNAYAALRKWDKVSLIRKSVRDKH-------I 743
Query: 384 NVCAGLSEIKMGKEVHGFIHRND 406
G S I++GK+VH F +D
Sbjct: 744 KKNPGYSWIEIGKKVHVFCSGDD 766
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 185/653 (28%), Positives = 327/653 (50%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ ++ + C +++ +L ++ + ++ N + Y G+L A
Sbjct: 269 PTPYA-FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M +RD ++N ++ +Q G+ + +ELF M G+ + T A+++ + + +
Sbjct: 328 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGT 387
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +QLH K GF N +E +L++ Y KC + A F + + +N V WNV++
Sbjct: 388 LFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVA 447
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y + + + + +F +M E+I P +T+ + L C L G QIH IIK F+ +
Sbjct: 448 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLN 507
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V L +MY K G+L+ A +L IR A
Sbjct: 508 AYVCSVLIDMYAKLGKLDTAWDIL-----------------------IRFAG-------- 536
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW M+AGYT+ +AL M D+V L ++ CAGL +K G+++
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + +SS++ NAL+ +Y KCGN+ A + F Q ++ D ++WNA+++G+ + G
Sbjct: 597 HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQ-TEAGDNIAWNALVSGFQQSGN 655
Query: 459 SEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EEA+ F+ M E S FTF + + A + ++++QGKQ+H + + Y+ A
Sbjct: 656 NEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 715
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
++ +Y KC + A + F E S + + N+MI + + G EAL+ F M ++P+
Sbjct: 716 IISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPN 775
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+T G+L AC H G V +++F+SM +YG+ P+ EHY C++ + R G + +DF+
Sbjct: 776 HVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFI 835
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE+AA L EL P + + +N +
Sbjct: 836 LEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 888
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 270/581 (46%), Gaps = 35/581 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
++ ++ E RKL S ++ L + ++ Y G+LD A +FDEMPER +WN
Sbjct: 80 TNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNK 139
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHGLIVKR 172
M+ G+ LF M + V+ N+ T++ VL + + V +Q+H I+ +
Sbjct: 140 MIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQ 199
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
G + I+ + L+D Y + + ARR+FD + K+ SW ++ EA+ +F
Sbjct: 200 GLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLF 259
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
M I P + F++ L AC + S G Q+HG+++K+ F D V +L +Y
Sbjct: 260 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 319
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G S++S A +F+ M +R+ +++N ++ G +
Sbjct: 320 G---------------------SLIS----------AEHIFSNMSQRDAVTYNTLINGLS 348
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ ++A++ M+ + D TL ++ C+ + G+++H + + ++SN
Sbjct: 349 QCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDK 408
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
+ ALL++Y KC ++ +A +F + ++ + V WN +L Y + F +MQ E
Sbjct: 409 IEGALLNLYAKCSDIETALNYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 467
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P+++T+ ++L C + LE G+QIH +I+ +++N L+++Y K L+ A
Sbjct: 468 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTA 527
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ + DV+ +MI G+ +AL F M GI+ D + + AC
Sbjct: 528 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 587
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+K Q + C G L ++ LY + G ++E
Sbjct: 588 QALKEGQQIH-AQACVSGFSSDLPFQNALVTLYSKCGNIEE 627
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 230/493 (46%), Gaps = 41/493 (8%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L ++LH I+K GF N L L+D Y + A ++FD++ + +WN +++
Sbjct: 84 LDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKE 143
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDFEG 277
+ +F +M+ E++ P TF+ L AC S ++ + QIH II
Sbjct: 144 LASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGK 203
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+V L ++Y + +G + AR +F+ +
Sbjct: 204 STIVCNPLIDLYSR-------------------------------NGFVDRARRVFDGLY 232
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ SW AM++G +++ EA+ M +L+ C + +++G++
Sbjct: 233 LKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 292
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + + +SS+ +V NAL+ +Y G+L SA F MSQR D V++N ++ G ++ G
Sbjct: 293 LHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQR-DAVTYNTLINGLSQCG 351
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E+AM F MQ + P T +L+ AC++ +L G+Q+H + + + N G
Sbjct: 352 YGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEG 411
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+ +Y KC +E A+ F E+ +V++ N M++ + + R + +F M+ E I P
Sbjct: 412 ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471
Query: 577 DHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYEC--MIKLYCRYGYMKEL 633
+ T+ IL CI G+++L Q ++ + QL Y C +I +Y + G +
Sbjct: 472 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF----QLNAYVCSVLIDMYAKLGKLDTA 527
Query: 634 EDFVNRMPFNPTV 646
D + R V
Sbjct: 528 WDILIRFAGKDVV 540
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 199/459 (43%), Gaps = 48/459 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y + + C + ++ S ++ ++ + I+ Y K G LD A
Sbjct: 471 PNQYT-YPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWD 529
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+ +D SW M+ YTQ F + L F M G+ ++++ N + + A
Sbjct: 530 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 589
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +Q+H GF ++ +++LV Y KC + +A F+ + + ++WN +V
Sbjct: 590 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSG 649
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ +GN +EA+ +F +M RE I NFTF +A+ A S ++ +G Q+H VI K ++ +
Sbjct: 650 FQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSE 709
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V ++ MY KCG I +A++ F E+
Sbjct: 710 TEVCNAIISMYAKCGS-------------------------------ISDAKKQFLELSM 738
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+N +SWNAM+ Y++ EALD M + + VTL +L+ C+ + + G E
Sbjct: 739 KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798
Query: 399 -------HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+G + ++ +V ++DM + G L A+ + +M D + W +L+
Sbjct: 799 FESMNTEYGLAPKPEH----YV--CVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLS 852
Query: 452 G---YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
+ E A E++ E + L A C
Sbjct: 853 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVC 891
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 204/724 (28%), Positives = 350/724 (48%), Gaps = 78/724 (10%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+YA + Q C + ++ + LV FL +R +E Y + G ++DAR +FD+M
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ER+ SW A++ Y G T++LF M + GV + + V ++ +E V K
Sbjct: 151 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210
Query: 164 QLHGLIVKRGF----------------CG---------------NVILESSLVDAYGKCM 192
++ ++ GF CG +V + + +V Y
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 193 VMTDARRMFDDIQ----NKNAVSWNVIVRRY----------------------------- 219
A + D++ + V+WN I+ Y
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 220 --LVAGNGK-----EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
L+AG+ + EA+ +F KM+ E ++P + T A+A+ AC+ LS G +IHG IK
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390
Query: 273 IDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
++ D+++G SL + Y KC +E AR + +++SW ++++GYA+ G EA E
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450
Query: 332 LFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
L +EM E ++I+WN ++ G+T+ K AL+F M D + T+ L C
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +K+GKE+HG++ RN + V +AL+ MY C +L A F ++S R D V WN
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR-DVVVWN 569
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++++ A+ G+S A+ EM + T + L AC+ +++L QGK+IH F+IR
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 629
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ +L+++Y +C ++ + R+F D++ N MI + + G +A+ +F
Sbjct: 630 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 689
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
+ G+KP+HITF +L AC H G ++ ++F M+ +Y + P +E Y CM+ L R
Sbjct: 690 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 749
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G E +F+ +MPF P + + CR + L E+AAR L EL P + + +
Sbjct: 750 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLM 809
Query: 687 TNRF 690
N +
Sbjct: 810 ANIY 813
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 262/550 (47%), Gaps = 78/550 (14%)
Query: 116 GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
G+ +NG L M+ + YA++L+ + L + Q+H +V G
Sbjct: 62 GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
L S L++ Y + + DARRMFD + +N SW I+ Y G+ +E + +F+ M
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ E +RP +F F ACS L + G ++ ++ I FEG+ V GS+ +M++KCGR+
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 241
Query: 296 EDARGLLDQPDERNI-----------------------------------ISWTSIVSGY 320
+ AR ++ + +++ ++W +I+SGY
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301
Query: 321 AISGRIREARELFNEMP-----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A SG+ EA + F EM + NV+SW A++AG ++ EAL M +
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+T+ ++ C LS ++ G+E+HG+ I + S++ V N+L+D Y KC ++ AR F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---------------------- 472
M ++ D VSWNA+L GYA RG EEA+ SEM+++
Sbjct: 422 -GMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480
Query: 473 --------------TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
P+ T LAAC + +L+ GK+IH +V+RN E++ AL
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSAL 540
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ +Y+ C LE A VF E S+ DV++ NS+I + R AL++ M ++ +
Sbjct: 541 ISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNT 600
Query: 579 ITFHGILLAC 588
+T L AC
Sbjct: 601 VTMVSALPAC 610
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 12/392 (3%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP----ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
N + Y G+ ++A L EM E D +WN ++ +TQ G LE F M+
Sbjct: 433 NAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHS 492
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ N T + L + + L + K++HG +++ + + S+L+ Y C +
Sbjct: 493 MGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEV 552
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F ++ ++ V WN I+ +G A+ + +M ++ T +AL ACS
Sbjct: 553 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 612
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L++ +G +IH II+ + + +L SL +MY +CG ++ +R + D +R+++SW +
Sbjct: 613 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 672
Query: 317 VSGYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+S Y + G +A LF + + N I++ +L+ + S L +E + F M KT
Sbjct: 673 ISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY-FKMMKTEY 731
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+D V LS E FI + + N V +LL R N A
Sbjct: 732 AMDPAVEQYACMVDL-LSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790
Query: 433 WFYQMSQRRDKVSWNAVLTG--YARRGQSEEA 462
+ + + S N VL Y+ G+ E+A
Sbjct: 791 AARYLFELEPQSSGNYVLMANIYSAAGRWEDA 822
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 333/684 (48%), Gaps = 47/684 (6%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQL--CASSKAIVEARK 63
AT+ +N++ ++SP P PS I H+ + ++ FQ+ +V A +
Sbjct: 6 ATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSN-FQVNNFLERGDLVHAHQ 64
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ + P LN I + K G L AR LFD M ER SW ++G Y Q+
Sbjct: 65 VFDQM----PAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQ 120
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
L+ DM G+ + +T +L E V Q+H ++K G+ N+++ +S
Sbjct: 121 SKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNS 180
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LVDAY K + A ++F + NK+ V++N ++ Y G +EA+ +F ++ I+P
Sbjct: 181 LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPS 240
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
+FTFA L A L G Q+HG ++K +F + V +L + Y K D
Sbjct: 241 DFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK----------HD 290
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
Q DE +LF EMPE + IS+N ++ Y + +KE+ D
Sbjct: 291 QVDE---------------------VGKLFXEMPELDGISYNVVITSYAWNGQFKESFDL 329
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH--GFIHRNDYSSNIFVSNALLDMY 421
++ T D Q +L++ ++MG+++H ++ S V NAL+DMY
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMY 387
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS-KFTF 480
KC + A+ F ++ + V W A+++ Y ++G+ EE + FS+M+ P+ + TF
Sbjct: 388 AKCNGDKEAQKIFDNIACK-STVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATF 446
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
++L ACAN++S+ G+Q+H +IR+ + NV AL++ Y KC C+ AI+ F E
Sbjct: 447 ASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ + N++I + N L F M + G KPD ++F +L AC H G V+ AL
Sbjct: 507 RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH 566
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F+SM Y + P+ EHY M+ + CR G E E + MPF P+ M + + CR +
Sbjct: 567 FNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHK 626
Query: 661 YATLGEWAARRL---NELNPWAPF 681
L + AA RL +L AP+
Sbjct: 627 NHELAKKAADRLFNMEDLRDAAPY 650
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 328/632 (51%), Gaps = 37/632 (5%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+L+S LV V++ I+ Y K GN+D AR +FD +PE+ +W M+ + G
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+L+LF + V + + VL + + L KQ+H I++ G + L +
Sbjct: 229 RSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
L+D+Y KC + A ++FD + NKN +SW ++ Y KEA+ +F M + ++P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
F ++ L +C+ L + G Q+H IK + D V SL +MY KC L +AR +
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF 408
Query: 303 DQPDERNIISWTSIVSGYAISG---RIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
D +++ + +++ GY+ G + +A +F++M R L+
Sbjct: 409 DIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFR---------------LIRPS 453
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
L FV L+R + A L+ + + K++HG + + + +IF +AL+
Sbjct: 454 LLTFVSLLRAS----------------ASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIA 497
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
+Y C L+ +R+ F +M + +D V WN++ +GY ++ ++EEA+ F E+Q RP +F
Sbjct: 498 VYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEF 556
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF ++ A N++SL+ G++ HC +++ E N AL+++Y KC E A + F +
Sbjct: 557 TFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
+S DV+ NS+I + ++ GR+AL++ M EGI+P++ITF G+L AC H G V+ L
Sbjct: 617 ASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGL 676
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
+ F+ M ++GI P+ EHY CM+ L R G + E + + +MP P + R + C K
Sbjct: 677 KQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 659 NGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
G L E+AA +P F + +N +
Sbjct: 736 AGNVELAEYAAEMAILSDPKDSGSFTLLSNIY 767
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 275/563 (48%), Gaps = 39/563 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L QL A ++ + ++ +L N + Y + G + AR +F++MP
Sbjct: 47 FARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMP 106
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELG--V 161
ER+ +W+ M+ A +GF +L +FLD + S N+ ++ +++ + G +
Sbjct: 107 ERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWM 166
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
QL +VK F +V + + L+D Y K + AR +FD + K+ V+W ++ +
Sbjct: 167 VFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G ++ +F++++ ++ P + + L ACS L G QIH I++ E D +
Sbjct: 227 MGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASL 286
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ L + YVKCGR+ A L D +NIISWT+++SGY + +EA ELF MP
Sbjct: 287 MNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMP---- 342
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
K D IL CA L ++ G +VH +
Sbjct: 343 ---------------------------KFGLKPDMFACSSILTSCASLHALEFGTQVHAY 375
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + ++ +V+N+L+DMY KC L AR F + D V +NA++ GY+R G E
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF-DIFAADDVVLFNAMIEGYSRLGTQWE 434
Query: 462 ---AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
A+ F +M++ RPS TF +LL A A+++SL KQIH + + +++ A
Sbjct: 435 LHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSA 494
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ VY+ C CL+ + VF E D++I NSM G+ EAL +F ++ +PD
Sbjct: 495 LIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPD 554
Query: 578 HITFHGILLACIHEGNVKLALQF 600
TF ++ A + +++L +F
Sbjct: 555 EFTFVDMVTAAGNLASLQLGQEF 577
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 203/441 (46%), Gaps = 43/441 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS A+ ++ + + ++ N I+ Y KC L +AR +FD D +
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419
Query: 112 NAMLGAYTQNGFPGR---TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
NAM+ Y++ G L +F DM + + +T+ ++LR+SA LG+SKQ+HGL
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+ K G ++ S+L+ Y C + D+R +FD+++ K+ V WN + Y+ +EA
Sbjct: 480 MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEA 539
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F ++ RP FTF + + A L+S G + H ++K E + + +L +M
Sbjct: 540 LNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVISW 344
Y KCG EDA D R+++ W S++S YA G R+A ++ +M E N I++
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITF 659
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+L+ + + L ++ L LM + + E ++
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLR----------------------FGIEPETEHYV-- 695
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
++ + + G L AR +M + + W ++L+G A+ G E A
Sbjct: 696 -----------CMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEY 744
Query: 465 SFSEMQWETRPSKFTFETLLA 485
+ +EM + P TLL+
Sbjct: 745 A-AEMAILSDPKDSGSFTLLS 764
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 175/366 (47%), Gaps = 17/366 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + AS ++ ++++ + F +F + I Y C L D+R +FDEM
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMK 516
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D WN+M Y Q L LFL++ S ++ T+ +++ ++ L + ++
Sbjct: 517 VKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQE 576
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H ++KRG N + ++L+D Y KC DA + FD +++ V WN ++ Y G
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G++A+ M KM+ E I P TF L ACS +G++ ++++ E +
Sbjct: 637 GRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC 696
Query: 285 LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMP----ER 339
+ + + GRL +AR L+++ P + I W S++SG A +G + E E EM +
Sbjct: 697 MVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNV-ELAEYAAEMAILSDPK 755
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ S+ + Y +W +A K ++ + G++ G S I++ KEVH
Sbjct: 756 DSGSFTLLSNIYASKGMWTDA--------KKVRERMKFE-GVVKE--PGRSWIEINKEVH 804
Query: 400 GFIHRN 405
F+ ++
Sbjct: 805 IFLSKD 810
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 196/674 (29%), Positives = 312/674 (46%), Gaps = 72/674 (10%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP--ERDGG 109
C+S +VE R L + + N I YGKC +L DAR +F+ M +R+
Sbjct: 17 CSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVV 76
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
SWNAM+ AY QNG L L+ MN G+ + +T+ +VL + + L +++H +
Sbjct: 77 SWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQGREIHNRV 133
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
G L ++LV Y + + DA+RMF +Q ++ SWN ++ + +G+ A+
Sbjct: 134 FYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGAL 193
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
FK ++ D++P + T+ N + S EG +IH I+ F+ D VV +L MY
Sbjct: 194 -RIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMY 252
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG EARE+F++M +R+++SWN M+
Sbjct: 253 GKCGS-------------------------------SHEAREVFDKMKKRDMVSWNVMIG 281
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
Y + + EAL+ + + T IL C+ + + G+ VH I S
Sbjct: 282 CYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDS 341
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------------------- 440
+ V+ AL++MY KCG+L AR F M R
Sbjct: 342 EVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 441 ----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLE 494
RD +SWNA++T Y + G + AM F EM +P TF +L ACA++ L
Sbjct: 402 RLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+ K +H + + E NVV L+ +Y +C LE A R+F + V+ +M+ F
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
R EAL++F M EG+KPD +T+ IL C H G+++ ++F M + + P
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTA 581
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+H+ M+ L R G + + ++ + MPF P CR +G LGE AA R+ E
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 675 LNPWAPFQFKITTN 688
L+P + + +N
Sbjct: 642 LDPSSTAPYIAMSN 655
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 242/499 (48%), Gaps = 46/499 (9%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +T+ VL S + ++ + LH I F + ++ ++L+ YGKC + DAR +F
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 202 D--DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+ D + +N VSWN ++ Y G+ EA+V++++M + + + TF + L ACS L+
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G +IH + + + +L MY + G + DA+ + R+ SW +++
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 320 YAISGRIREARELFNEMP---ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ SG A +F EM + N ++ +++G++ + E
Sbjct: 183 HSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPE----------------- 225
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
G+++H I N + +++ V+ AL++MY KCG+ AR F +
Sbjct: 226 ------------------GRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
M ++RD VSWN ++ Y G EA+ + ++ E + +K TF ++L AC+++ +L Q
Sbjct: 268 M-KKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+ +H ++ + V ALV +Y KC LE A +VF + D + +++I +
Sbjct: 327 GRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
N G++A + + + G + D I+++ ++ + G A++ F M G+ P
Sbjct: 387 NGYGKDARKARKVFDRLGSR-DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAV 445
Query: 616 HYECMIKLYCRYGYMKELE 634
+ +++ G + E++
Sbjct: 446 TFIAVLEACASLGRLSEVK 464
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 195/428 (45%), Gaps = 43/428 (10%)
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
D +P N TF L +CS EG +H I FE D +V +L MY KC L DA
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 299 RGLLDQPD--ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
R + + D +RN++SW ++++ YA +G EA L+ W L G
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY----------WRMNLQGL----- 106
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
D VT +L C+ L++ G+E+H + + S ++NA
Sbjct: 107 ----------------GTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANA 147
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS 476
L+ MY + G++ A+ F Q Q RD+ SWNAV+ +++ G A+ F EM+ + +P+
Sbjct: 148 LVTMYARFGSVGDAKRMF-QSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPN 206
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T+ +++ + L +G++IH ++ N ++ ++V AL+ +Y KC A VF
Sbjct: 207 STTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFD 266
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ D++ N MI + N EALE++ + EG K TF IL AC +VK
Sbjct: 267 KMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGAC---SSVKA 323
Query: 597 ALQ--FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
Q S + G+ ++ ++ +Y + G ++E N M N +
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIG 382
Query: 655 KCRKNGYA 662
NGY
Sbjct: 383 AYASNGYG 390
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 63/411 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ + + C+S KA+ + R + S+++ V + + Y KCG+L++AR +F+
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 103 MPERDGG----------------------------------SWNAMLGAYTQNGFPGRTL 128
M RD SWNAM+ Y QNG +
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAM 428
Query: 129 ELFLDMN-HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
++F +M +G+ + +T+ VL + A L K LH I + NV++ ++L++
Sbjct: 429 KIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINM 488
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y +C + +A R+F + K VSW +V + G EA+ +F +M E ++P + T+
Sbjct: 489 YARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548
Query: 248 ANALFACSFLSSPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+ LF C+ S +G ++H + D ++ ++ + GRL DA+
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHALAPTADH------FAAMVDLLGRSGRLFDAKE 602
Query: 301 LLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLL 356
LL+ P E + ++W + ++ I G++ A E E+ + + AM Y +
Sbjct: 603 LLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGM 662
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
W++ V +RK ++ L GLS I++ ++H F Y
Sbjct: 663 WEK----VASVRKKMEERG-------LKKLPGLSFIEVDGKLHEFSSGGKY 702
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 315/612 (51%), Gaps = 37/612 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K GN+ D R +FDEM +RD SWN++L Y+ N F + ELF M G
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T + V+ + A + + + Q+H L+VK GF ++ +SL+ K ++ DAR +
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD+++NK++VSWN ++ +++ G EA F M +P + TFA+ + +C+ L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKEL 320
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+H +K + VL +L KC ++DA L S++ G
Sbjct: 321 GLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLF------------SLMHGV 368
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
++V+SW AM++GY ++ +A++ LMR+ + T
Sbjct: 369 ------------------QSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYS 410
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL V + E+H + + +Y + V ALLD + K GN+ A + +++ +
Sbjct: 411 TILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDA-VKVFELIET 465
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAAC-ANISSLEQGKQ 498
+D ++W+A+L GYA+ G++EEA F ++ E +P++FTF +++ AC A +S+EQGKQ
Sbjct: 466 KDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQ 525
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H + I+ + +LV +Y K +E A +FK D++ NSMI G+ + +
Sbjct: 526 FHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQ 585
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
++ALEVF M+K ++ D ITF G++ AC H G V +F+ M + I P +EHY
Sbjct: 586 AKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYS 645
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
CMI LY R G + + D +N MPF P + R + R + LG+ AA ++ L P
Sbjct: 646 CMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQ 705
Query: 679 APFQFKITTNRF 690
+ + +N +
Sbjct: 706 HSAAYVLLSNIY 717
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 264/550 (48%), Gaps = 46/550 (8%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A+ LFD+ P RD N +L Y++ L LF+ + SG+S + T + VL A
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
V +Q+H VK G ++ + +SLVD Y K + D RR+FD++ +++ VSWN +
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y + +F M E RP +T + + A + + GMQIH +++K+ F
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E + +V SL M K G L DAR + D + ++ +SW S+++G+ I+G+ EA E FN
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M LAG + T ++ CA L E+ +
Sbjct: 295 M----------QLAGAKPT---------------------HATFASVIKSCASLKELGLV 323
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ +H ++ S+N V AL+ KC + A F M + VSW A+++GY +
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQ 383
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G +++A+ FS M+ E +P+ FT+ T+L + E IH VI+ YE +
Sbjct: 384 NGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSV 439
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL++ + K + A++VF+ + DVI ++M+ G+ EA ++F + +EGI
Sbjct: 440 GTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGI 499
Query: 575 KPDHITFHGILLACIH-EGNVKLALQFFDSMRCKYGIIPQLEHYEC----MIKLYCRYGY 629
KP+ TF I+ AC +V+ QF Y I +L + C ++ LY + G
Sbjct: 500 KPNEFTFCSIINACTAPTASVEQGKQFH-----AYAIKLRLNNALCVSSSLVTLYAKRGN 554
Query: 630 MKELEDFVNR 639
++ + R
Sbjct: 555 IESAHEIFKR 564
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 205/433 (47%), Gaps = 45/433 (10%)
Query: 176 GNVILESSLVDAYGKCMVMTD----ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
N +L+S +V + ++ A+++FD ++ N ++ RY +EA+ +
Sbjct: 30 ANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHL 89
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F + R + P ++T + L C+ + G Q+H +K V SL +MY K
Sbjct: 90 FVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTK 149
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
+G +R+ R +F+EM +R+V+SWN++L GY
Sbjct: 150 -------------------------------TGNVRDGRRVFDEMGDRDVVSWNSLLTGY 178
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ + + + LM+ D T+ ++ A + +G ++H + + + +
Sbjct: 179 SWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETER 238
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V N+L+ M K G LR AR+ F M + +D VSWN+++ G+ GQ EA +F+ MQ
Sbjct: 239 LVCNSLISMLSKSGMLRDARVVFDNM-ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQL 297
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+P+ TF +++ +CA++ L + +HC +++ N AL+ TKC ++
Sbjct: 298 AGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDD 357
Query: 531 AIRVFKESSSLDVIIC-NSMILGFCHNERGREALEVFGLMKKEGIKPDHITF-------H 582
A +F + ++ +MI G+ N +A+ +F LM++EG+KP+H T+ H
Sbjct: 358 AFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQH 417
Query: 583 GILLACIHEGNVK 595
+ ++ IH +K
Sbjct: 418 AVFISEIHAEVIK 430
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 162/303 (53%), Gaps = 6/303 (1%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+++ +A + + CAS K + R L + + +L + KC +DDA LF
Sbjct: 303 THATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLF 362
Query: 101 DEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
M + SW AM+ Y QNG + + LF M GV N TY+ +L + +
Sbjct: 363 SLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL---TVQHAV 419
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+S ++H ++K + + + ++L+DA+ K ++DA ++F+ I+ K+ ++W+ ++ Y
Sbjct: 420 FIS-EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGY 478
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGD 278
AG +EA +F ++ RE I+P FTF + + AC+ ++ E G Q H IK+
Sbjct: 479 AQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNA 538
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL +Y K G +E A + + ER+++SW S++SGYA G+ ++A E+F EM +
Sbjct: 539 LCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQK 598
Query: 339 RNV 341
RN+
Sbjct: 599 RNL 601
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 186/624 (29%), Positives = 322/624 (51%), Gaps = 31/624 (4%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN-GFPGRTLELFLDMNHSGVSAN 142
I Y G+ A +F R+ WN+ + + + G LE+F +++ GV +
Sbjct: 614 ISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFD 673
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
Y+ L++ +++ + ++HG ++KRGF +V L +L++ YG+C + A ++F
Sbjct: 674 SEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFH 733
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
++ N A+ WN + L + ++ V +F KM ++ T L AC + +
Sbjct: 734 EMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNA 793
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
QIHG + + + D + L MY K G+LE AR + D + RN SW S++S YA
Sbjct: 794 AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 853
Query: 323 SGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G + +A LF E+ + ++++WN +L+G+ +E L+ + M+ + +
Sbjct: 854 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 913
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ +L + L + MGKE HG++ RN + +++V +L+DMY K +L SA+ F M
Sbjct: 914 MTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM- 972
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET------------------------- 473
+ R+ +WN++++GY+ +G E+A+ ++M+ E
Sbjct: 973 KNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF 1032
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P+ + LL ACA++S L++GK+IHC IRN + +V AL+++Y+K L+ A +
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF+ + + N MI+GF G+EA+ VF M+K G+ PD ITF +L AC + G
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 1152
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
+ ++FDSM Y I+P+LEHY CM+ L R GY+ E D ++ MP P + +
Sbjct: 1153 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212
Query: 654 DKCRKNGYATLGEWAARRLNELNP 677
CR + E AA+ L +L P
Sbjct: 1213 GSCRIHKNLXFAETAAKNLFKLEP 1236
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 224/461 (48%), Gaps = 54/461 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V+L + YG+C L+ A +F EMP + WN + Q+ + +ELF M
Sbjct: 709 VYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQF 768
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S + A T VL++ + L +KQ+HG + + G +V L + L+ Y K +
Sbjct: 769 SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLEL 828
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD ++N+N SWN ++ Y G +A +F+++ D++P T+ N L + F
Sbjct: 829 ARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTW-NCLLSGHF 887
Query: 257 LSSPYE------------------------------------GMQIHGVIIKIDFEGDDV 280
L E G + HG +++ F+ D
Sbjct: 888 LHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVY 947
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER- 339
V SL +MYVK L A+ + D RNI +W S+VSGY+ G +A L N+M +
Sbjct: 948 VGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG 1007
Query: 340 ---NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++++WN M++GY +W A RK + ++ +L CA LS ++ GK
Sbjct: 1008 IKPDLVTWNGMISGYA---MWGCA-------RKAFMP-NSASITCLLRACASLSLLQKGK 1056
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E+H RN + ++FV+ AL+DMY K +L++A F ++ Q + SWN ++ G+A
Sbjct: 1057 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI-QNKTLASWNCMIMGFAIF 1115
Query: 457 GQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
G +EA++ F+EMQ P TF LL+AC N + +G
Sbjct: 1116 GLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 1156
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 168/379 (44%), Gaps = 63/379 (16%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ Q C A+ A+++ + F V L N I Y K G L+ AR +FD M R+
Sbjct: 781 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 840
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHS------------------------------ 137
SWN+M+ +Y GF LF ++ S
Sbjct: 841 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 900
Query: 138 -----GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
G N + +VL++ +E L + K+ HG +++ GF +V + +SL+D Y K
Sbjct: 901 RMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 960
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA-- 250
+ A+ +FD+++N+N +WN +V Y G ++A+ + +M +E I+P T+
Sbjct: 961 SLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 1020
Query: 251 ----------------------LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
L AC+ LS +G +IH + I+ F D V +L +M
Sbjct: 1021 GYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDM 1080
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISW 344
Y K L++A + + + + SW ++ G+AI G +EA +FNEM + V I++
Sbjct: 1081 YSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 1140
Query: 345 NAMLAGYTRSLLWKEALDF 363
A+L+ S L E +
Sbjct: 1141 TALLSACKNSGLIGEGWKY 1159
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 152/353 (43%), Gaps = 13/353 (3%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD- 373
+++S Y G A +F RN + WN+ + + S +L V + K
Sbjct: 612 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSS---AGSLHIVLEVFKELHGK 668
Query: 374 ---IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D + L C + +I +G E+HG + + + ++++ AL++ Y +C L A
Sbjct: 669 GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 728
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
F++M + + WN + + + ++ + F +MQ+ + T +L AC
Sbjct: 729 NQVFHEMPN-PEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ +L KQIH +V R + +V L+ +Y+K LE A RVF + + NSM
Sbjct: 788 MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 847
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I + +A +F ++ +KPD +T++ +L G + L M+ + G
Sbjct: 848 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-G 906
Query: 610 IIPQLEHYECMIKLYCRYGYM---KELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
P +++ G++ KE +V R F+ V + + D KN
Sbjct: 907 FKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKN 959
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 287/501 (57%), Gaps = 9/501 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
EG QIHG ++K+ F+ D V SL MY + GRLEDAR + D R+++S+T++
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDID 375
++GY G I A++LF+E+P ++V+SWNAM++GY + +KEAL+ F +M T D
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T+ +++ CA I++G+ VH +I+ + ++SN+ + NAL+D+Y K G + +A F
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSL 493
+ +D +SWN ++ GY +EA+ F EM ET P+ T ++L ACA++ ++
Sbjct: 282 GL-WNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAI 339
Query: 494 EQGKQIHCFVIRNCYEI--NVVC-RGALVEVYTKCCCLEYAIRVFKES-SSLDVIICNSM 549
+ G+ IH ++ + + NV + +L+++Y KC ++ A +VF S S+ + N+M
Sbjct: 340 DIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAM 399
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I GF + R A ++F M+ GI+PD ITF G+L AC H G + L F SM Y
Sbjct: 400 ISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYE 459
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P+LEHY CMI L G KE E+ +N MP P + + C+ +G LGE A
Sbjct: 460 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFA 519
Query: 670 RRLNELNPWAPFQFKITTNRF 690
++L ++ P + + +N +
Sbjct: 520 KKLIKIEPGNSGSYVLLSNIY 540
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 238/541 (43%), Gaps = 100/541 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +FD + E + WN M + + P L+L+L M G+ + T+ +L+S A+
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR----------------- 198
+Q+HG ++K GF ++ + +SL+ Y + + DAR
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 199 --------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK-MLREDIRPL 243
++FD+I K+ VSWN ++ Y+ GN KEA+ +F + M+ ++RP
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
T + AC+ S G +H I F + ++ +L ++Y K G +E A L D
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+++ISW +++ GY T L+KEAL
Sbjct: 282 GLWNKDVISWNTLIGGY-------------------------------THMNLYKEALLL 310
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN---ALLDM 420
M ++ + + VT+ IL CA L I +G+ +H +I++ VS+ +L+DM
Sbjct: 311 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDM 370
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
Y KCG++ +A+ F R +WNA+++G+A G++ A FS M+ P T
Sbjct: 371 YAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDIT 430
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
F LL+AC++ L+ G+ I + R YEI +
Sbjct: 431 FVGLLSACSHSGMLDLGRNIFRSMTRG-YEI---------------------------TP 462
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
L+ C +LG H+ +EA E+ M E PD + + +L AC GN++L
Sbjct: 463 KLEHYGCMIDLLG--HSGLFKEAEEMINTMPME---PDGVIWCSLLKACKIHGNLELGES 517
Query: 600 F 600
F
Sbjct: 518 F 518
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 161/335 (48%), Gaps = 39/335 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P SY+ + L + CA SK E +++ +++ +++ I Y + G L+DAR
Sbjct: 87 PDSYT-FPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARK 145
Query: 99 -------------------------------LFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
LFDE+P +D SWNAM+ Y + G
Sbjct: 146 VFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEA 205
Query: 128 LELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
LELF +M + V ++ T V+ + A+ + + + +H I GF N+ + ++L+D
Sbjct: 206 LELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALID 265
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y K + A +FD + NK+ +SWN ++ Y KEA+++F +MLR P + T
Sbjct: 266 LYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 325
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEG----DDVVLGSLTEMYVKCGRLEDARGLL 302
+ L AC+ L + G IH V I +G + SL +MY KCG ++ A+ +
Sbjct: 326 MLSILPACAHLGAIDIGRWIH-VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVF 384
Query: 303 DQP-DERNIISWTSIVSGYAISGRIREARELFNEM 336
D R++ +W +++SG+A+ GR A ++F+ M
Sbjct: 385 DSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM 419
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 194/662 (29%), Positives = 336/662 (50%), Gaps = 40/662 (6%)
Query: 35 KSDEPVSYSLYAHLFQLCA--SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
+ D P Y L + Q C+ + +L+S LV V++ I+ Y K GN
Sbjct: 140 RKDSPNEYIL-SSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+D AR +FD +PE+ +W M+ + G +L+LF + V + + VL +
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L KQ+H I++ G + L + L+D+Y KC + A ++F+ + NKN +SW
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISW 318
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y KEA+ +F M + ++P + ++ L +C+ L + G Q+H IK
Sbjct: 319 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 378
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG---RIREA 329
+ D V SL +MY KC L DAR + D +++ + +++ GY+ G + EA
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+F +M R L+ L FV L+R + A L
Sbjct: 439 LNIFRDMRFR---------------LIRPSLLTFVSLLRAS----------------ASL 467
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ + + K++HG + + + +IF +AL+D+Y C L+ +R+ F +M + +D V WN++
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSM 526
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
GY ++ ++EEA+ F E+Q RP +FTF ++ A N++S++ G++ HC +++
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
E N AL+++Y KC E A + F ++S DV+ NS+I + ++ G++AL++
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M EGI+P++ITF G+L AC H G V+ L+ F+ M ++GI P+ EHY CM+ L R G
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAG 705
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ + + + +MP P + R + C K G L E AA +P F + +N
Sbjct: 706 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 689 RF 690
+
Sbjct: 766 IY 767
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 280/563 (49%), Gaps = 39/563 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L QL AS + + ++ + +L N I Y + G + AR +F++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELG--V 161
ER+ SW+ M+ A +G +L +FL+ + S N+ ++ +++ + G +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
QL +VK GF +V + + L+D Y K + AR +FD + K+ V+W ++ +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G ++ +F++++ +++ P + + L ACS L G QIH I++ E D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ L + YVKCGR+ A L + +NIISWT+++SGY + +EA ELF M +
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK--- 343
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
F ++ D IL CA L + G +VH +
Sbjct: 344 -----------------------FGLKP-----DMYACSSILTSCASLHALGFGTQVHAY 375
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG---Q 458
+ + ++ +V+N+L+DMY KC L AR F + D V +NA++ GY+R G +
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA+ F +M++ RPS TF +LL A A+++SL KQIH + + +++ A
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L++VY+ C CL+ + VF E D++I NSM G+ EAL +F ++ +PD
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 578 HITFHGILLACIHEGNVKLALQF 600
TF ++ A + +V+L +F
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEF 577
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 175/365 (47%), Gaps = 15/365 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + AS ++ ++++ + + +F + I+ Y C L D+R +FDEM
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D WN+M Y Q L LFL++ S ++ T+AN++ ++ + + ++
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H ++KRG N + ++L+D Y KC DA + FD +++ V WN ++ Y G
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
GK+A+ M KM+ E I P TF L ACS +G++ ++++ E +
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC 696
Query: 285 LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPERN 340
+ + + GRL AR L+++ P + I W S++SG A +G + A E+ ++
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
S+ + Y +W EA K ++ +V G++ G S I + KEVH
Sbjct: 757 SGSFTMLSNIYASKGMWTEA--------KKVRERMKVE-GVVKE--PGRSWIGINKEVHI 805
Query: 401 FIHRN 405
F+ ++
Sbjct: 806 FLSKD 810
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG I + ++SN L+++Y + G + AR F +M + R+ VSW+ +++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE-RNLVSWSTMVSACNHHG 124
Query: 458 QSEEAMTSFSEMQWETR---PSKFTFETLLAACANISSLEQGK----QIHCFVIRNCYEI 510
EE++ F E W TR P+++ + + AC+ + +G+ Q+ F++++ ++
Sbjct: 125 IYEESLVVFLEF-WRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDR 181
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+V L++ Y K ++YA VF + +MI G R +L++F +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 571 KEGIKPDHITFHGILLAC----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
++ + PD +L AC EG ++ +YG+ +I Y +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-----RYGLEMDASLMNVLIDSYVK 296
Query: 627 YGYMKELEDFVNRMP 641
G + N MP
Sbjct: 297 CGRVIAAHKLFNGMP 311
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 333/684 (48%), Gaps = 47/684 (6%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQL--CASSKAIVEARK 63
AT+ +N++ ++SP P PS I H+ + ++ FQ+ +V A +
Sbjct: 6 ATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSN-FQVNNFLERGDLVHAHQ 64
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ + P LN I + K G L AR LFD M ER SW ++G Y Q+
Sbjct: 65 VFDQM----PAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQ 120
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
L+ DM G+ + +T +L E V Q+H ++K G+ N+++ +S
Sbjct: 121 SKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNS 180
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LVDAY K + A ++F + NK+ V++N ++ Y G +EA+ +F ++ I+P
Sbjct: 181 LVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPS 240
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
+FTFA L A L G Q+HG ++K +F + V +L + Y K D
Sbjct: 241 DFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH----------D 290
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
Q DE +LF EMPE + IS+N ++ Y + +KE+ D
Sbjct: 291 QVDE---------------------VGKLFYEMPELDGISYNVVITSYAWNGQFKESFDL 329
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH--GFIHRNDYSSNIFVSNALLDMY 421
++ T D Q +L++ ++MG+++H ++ S V NAL+DMY
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMY 387
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS-KFTF 480
KC + A+ F ++ + V W A+++ Y ++G+ EE + FS+M+ P+ + TF
Sbjct: 388 AKCNGDKEAQKIFDNIACK-STVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATF 446
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
++L ACAN++S+ G+Q+H +IR+ + NV AL++ Y KC C+ AI+ F E
Sbjct: 447 ASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ + N++I + N L F M + G KPD ++F +L AC H G V+ AL
Sbjct: 507 RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH 566
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F+SM Y + P+ EHY M+ + CR G E E + MPF P+ M + + CR +
Sbjct: 567 FNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHK 626
Query: 661 YATLGEWAARRL---NELNPWAPF 681
L + AA RL +L AP+
Sbjct: 627 NHELAKKAADRLFNMEDLRDAAPY 650
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/674 (28%), Positives = 312/674 (46%), Gaps = 72/674 (10%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP--ERDGG 109
C+S + E R L + + N I YGKC +L DAR +F+ M +R+
Sbjct: 17 CSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVV 76
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
SWNAM+ AY QNG L L+ MN G+ + +T+ +VL + + L +++H +
Sbjct: 77 SWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQGREIHNRV 133
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
G L ++LV Y + + DA+RMF +Q ++ SWN ++ + +G+ A+
Sbjct: 134 FYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGAL 193
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
FK ++ D++P + T+ N + S EG +IH I+ F+ D VV +L MY
Sbjct: 194 -RIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMY 252
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG EARE+F++M +R+++SWN M+
Sbjct: 253 GKCGS-------------------------------SHEAREVFDKMKKRDMVSWNVMIG 281
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
Y ++ + EAL+ + + T IL C+ + + G+ VH I S
Sbjct: 282 CYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDS 341
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------------------- 440
+ V+ AL++MY KCG+L AR F M R
Sbjct: 342 EVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 441 ----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLE 494
RD + WNA++T Y + G + AM F EM +P TF +L ACA++ L
Sbjct: 402 RLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+ K +H + + E NVV L+ +Y +C LE A R+F + V+ +M+ F
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
R EAL++F M EG+KPD +T+ IL C H G+++ ++F M +G+ P
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTA 581
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+H+ M+ L R G + + ++ + MPF P CR +G LGE AA R+ E
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 675 LNPWAPFQFKITTN 688
L+P + + +N
Sbjct: 642 LDPSSTAPYIAMSN 655
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 242/499 (48%), Gaps = 46/499 (9%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +T+ VL S + ++ + LH I F + ++ ++L+ YGKC + DAR +F
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 202 D--DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+ D + +N VSWN ++ Y G+ EA+V++++M + + + TF + L ACS L+
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G +IH + + + +L MY + G + DA+ + R+ SW +++
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 320 YAISGRIREARELFNEMP---ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ SG A +F EM + N ++ +++G++ + E
Sbjct: 183 HSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPE----------------- 225
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
G+++H I N + S++ V+ AL++MY KCG+ AR F +
Sbjct: 226 ------------------GRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDK 267
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
M ++RD VSWN ++ Y + G EA+ + ++ E + +K TF ++L AC+++ +L Q
Sbjct: 268 M-KKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQ 326
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+ +H ++ + V ALV +Y KC LE A +VF + D + +++I +
Sbjct: 327 GRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
N G++A + + + G + D I ++ ++ + G A++ F M G+ P
Sbjct: 387 NGYGKDARKARKVFDRLGSR-DTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAV 445
Query: 616 HYECMIKLYCRYGYMKELE 634
+ +++ G + E++
Sbjct: 446 TFIAVLEACASLGRLSEVK 464
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 195/428 (45%), Gaps = 43/428 (10%)
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
D +P N TF L +CS EG +H I FE D +V +L MY KC L DA
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 299 RGLLDQPD--ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
R + + D +RN++SW ++++ YA +G EA L+ W L G
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLY----------WRMNLQGL----- 106
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
D VT +L C+ L++ G+E+H + + S ++NA
Sbjct: 107 ----------------GTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQSLANA 147
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS 476
L+ MY + G++ A+ F Q Q RD+ SWNAV+ +++ G A+ F EM+ + +P+
Sbjct: 148 LVTMYARFGSVGDAKRMF-QSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPN 206
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T+ +++ + L +G++IH ++ N ++ ++V AL+ +Y KC A VF
Sbjct: 207 STTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFD 266
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ D++ N MI + N EALE++ + EG K TF IL AC +VK
Sbjct: 267 KMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGAC---SSVKA 323
Query: 597 ALQ--FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
Q S + G+ ++ ++ +Y + G ++E N M N +
Sbjct: 324 LAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIG 382
Query: 655 KCRKNGYA 662
NGY
Sbjct: 383 AYASNGYG 390
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 182/411 (44%), Gaps = 63/411 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ + + C+S KA+ + R + S+++ V + + Y KCG+L++AR +F+
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368
Query: 103 MPERDG-----------------------------GS-----WNAMLGAYTQNGFPGRTL 128
M RD GS WNAM+ Y QNG +
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAM 428
Query: 129 ELFLDMN-HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
++F +M +G+ + +T+ VL + A L K LH I + NV++ ++L++
Sbjct: 429 KIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINM 488
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y +C + +A R+F + K VSW +V + G EA+ +F +M E ++P + T+
Sbjct: 489 YARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548
Query: 248 ANALFACSFLSSPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+ LF C+ S +G ++HG+ D ++ ++ + GRL DA+
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADH------FAAMVDLLGRSGRLFDAKE 602
Query: 301 LLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLL 356
LL+ P E + ++W + ++ I G++ A E E+ + + AM Y +
Sbjct: 603 LLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGM 662
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
W++ V +RK ++ L GLS I++ ++H F Y
Sbjct: 663 WEK----VASVRKKMEERG-------LKKLPGLSFIEVDGKLHEFSSGGKY 702
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/597 (29%), Positives = 308/597 (51%), Gaps = 40/597 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+R+ SWN+++ YTQ GF + LF + S + ++ T++N L L+L +
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ +H LI G G V+L +SL+D Y KC + AR +F+ ++VSWN ++ Y+
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFAC--SFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ E + + KMLR + ++ +AL AC +F SS G +HG +K+ + D V
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L + Y K G LE +A ++F MP+ N
Sbjct: 181 VGTALLDTYAKIGDLE-------------------------------DATKIFKLMPDPN 209
Query: 341 VISWNAMLAGYTR-----SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
V+ +NAM+AG+ + EA+ F M+ + T IL C+ + + G
Sbjct: 210 VVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECG 269
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K++H I + + S+ F+ NAL+++Y G++ F+ + + D VSW +++ G+ +
Sbjct: 270 KQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS-TPKLDVVSWTSLIVGHVQ 328
Query: 456 RGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
GQ E +T F E+ + R P +FT +L+ACAN+++++ G+QIH + I+ +
Sbjct: 329 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTII 388
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+ + + +Y KC ++ A FKE+ + D++ + MI + +EA+++F LMK GI
Sbjct: 389 QNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGI 448
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
P+HITF G+L+AC H G V+ L++F+ M+ +GI P ++H C++ L R G + E E
Sbjct: 449 APNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAE 508
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFD 691
F+ F M R + CR + G+ A R+ EL P A + + N ++
Sbjct: 509 SFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYN 565
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 214/429 (49%), Gaps = 40/429 (9%)
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
PV L N I+ Y KCG +D AR +F+ E D SWN+++ Y + G L L + M
Sbjct: 75 PVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKML 134
Query: 136 HSGVSANQITYANVLRSSAEELELGV--SKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G++ N + L++ + K LHG VK G +V++ ++L+D Y K
Sbjct: 135 RHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGD 194
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGN-----GKEAVVMFFKMLREDIRPLNFTFA 248
+ DA ++F + + N V +N ++ +L EA+ +FF+M ++P FTF+
Sbjct: 195 LEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFS 254
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+ L ACS + + G QIH I K + + D+ + +L E+Y G +ED +
Sbjct: 255 SILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL 314
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+++SWTS++ G+ +G+ LF+E+ +F R
Sbjct: 315 DVVSWTSLIVGHVQNGQFEGGLTLFHEL---------------------------LFSGR 347
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
K D+ T+ ++L+ CA L+ +K G+++H + + + + N+ + MY KCG++
Sbjct: 348 KP----DEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDID 403
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAAC 487
SA + F + ++ D VSW+ +++ A+ G ++EA+ F M+ P+ TF +L AC
Sbjct: 404 SANMTFKE-TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 462
Query: 488 ANISSLEQG 496
++ +E+G
Sbjct: 463 SHGGLVEEG 471
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 201/479 (41%), Gaps = 55/479 (11%)
Query: 41 SYSLYAHLFQLCAS--SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
SY+L + L + C S S +I + L V V + ++ Y K G+L+DA
Sbjct: 142 SYALGSAL-KACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATK 200
Query: 99 LFDEMPERDGGSWNAMLGAYTQ-----NGFPGRTLELFLDMNHSGVSANQITYANVLR-- 151
+F MP+ + +NAM+ + Q + F + LF +M G+ ++ T++++L+
Sbjct: 201 IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC 260
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
S+ E E G KQ+H I K + + ++LV+ Y + D + F + VS
Sbjct: 261 STIEAFECG--KQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVS 318
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W ++ ++ G + + +F ++L +P FT + L AC+ L++ G QIH I
Sbjct: 319 WTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAI 378
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K ++ S MY KCG ++ A + +I+SW+ ++S A G +EA +
Sbjct: 379 KTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVD 438
Query: 332 LFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
LF M N I++ +L + L +E L + +M+K
Sbjct: 439 LFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKD----------------- 481
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
HG + N+ S ++D+ + G L A + D V W
Sbjct: 482 -----------HGI------TPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 524
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++L+ R ++ + +E E P LL N + G Q+ IRN
Sbjct: 525 SLLSA-CRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYN----DAGIQMPATEIRN 578
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 163/366 (44%), Gaps = 22/366 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + + C++ +A +++ + + + F+ N +E Y G+++D F P
Sbjct: 253 FSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 312
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ D SW +++ + QNG L LF ++ SG ++ T + +L + A + +Q
Sbjct: 313 KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQ 372
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +K G I+++S + Y KC + A F + +N + VSW+V++ G
Sbjct: 373 IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGC 432
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
KEAV +F M I P + TF L ACS EG++ HG+ +
Sbjct: 433 AKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHS- 491
Query: 278 DDVVLGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ ++ + GRL +A ++D E + + W S++S + R+ +A + +
Sbjct: 492 -----ACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLS----ACRVHKATDTGKRV 542
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
ER + A Y LL+ D M T +I + + GLS I++G
Sbjct: 543 AERVIELEPEAAASYV--LLYNIYNDAGIQMPAT--EIRNLMKDRGVKKEPGLSWIEVGN 598
Query: 397 EVHGFI 402
VH F+
Sbjct: 599 VVHSFV 604
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/658 (28%), Positives = 321/658 (48%), Gaps = 39/658 (5%)
Query: 21 TPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
PS T + P +S H F S ++ + + + ++ + + FL
Sbjct: 28 APSSTFVSVHHAPFFNQAPSVFSSLLHQF-----SNTLIHVKSIHAQIIKNWVSTESFLA 82
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ I Y G L AR +FD+ + NAM+ + +N LF M +
Sbjct: 83 AKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIE 142
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T L++ + L+ V ++ V+RGF ++ + SS+V+ K + DA+++
Sbjct: 143 INSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKV 202
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + K+ V WN I+ Y+ G E++ MF +M+ +RP T AN L AC
Sbjct: 203 FDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLK 262
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
GM H ++ + D VL SL +MY G A + D R++ISW +++SGY
Sbjct: 263 KVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGY 322
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+G I E+ LF + + + D TL
Sbjct: 323 VQNGMIPESYALFRRLVQ-------------------------------SGSGFDSGTLV 351
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
++ C+ S+++ G+ +H I R + S++ +S A++DMY KCG ++ A I F +M +
Sbjct: 352 SLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-K 410
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
++ ++W A+L G ++ G +E+A+ F +MQ E + T +L+ CA++ SL +G+ +
Sbjct: 411 KNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTV 470
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL-DVIICNSMILGFCHNER 558
H IR+ Y + V AL+++Y KC + A ++F L DVI+CNSMI+G+ +
Sbjct: 471 HAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGH 530
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
GR AL V+ M +E +KP+ TF +L AC H G V+ F SM + + PQ +HY
Sbjct: 531 GRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYA 590
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
C++ L+ R G ++E ++ V +MPF P+ +L + CR + +G A RL L+
Sbjct: 591 CLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLD 648
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 294/561 (52%), Gaps = 43/561 (7%)
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEE------LELGVSKQLHGLIVKRGFCGNV 178
GR E MN + ++ Y++V R +E LE G +++H I+K G N
Sbjct: 26 GRLKEALGIMNTMILQGTRV-YSDVFRGLLQECARLRSLEQG--REVHAAILKSGIQPNR 82
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
LE++L+ Y KC +TDARR+FD I+++N VSW ++ ++ EA + M
Sbjct: 83 YLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLA 142
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+P TF + L A + G ++H I++ E + V SL MY KC
Sbjct: 143 GCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC------ 196
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
G I +AR +F+ +PE+NV++W ++AGY +
Sbjct: 197 -------------------------GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVD 231
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
AL+ + M++ +++T IL C + ++ GK+VH +I ++ Y ++V N+L+
Sbjct: 232 VALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLI 291
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
MY KCG L AR F + R D V+W A++TGYA+ G +EA+ F MQ + +P K
Sbjct: 292 TMYCKCGGLEEARKLFSDLPHR-DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDK 350
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
TF ++L +C++ + L++GK+IH ++ Y ++V + ALV +Y KC ++ A VF +
Sbjct: 351 MTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQ 410
Query: 538 SSSLDVIICNSMILGFC-HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S +V+ ++I G C + R REALE F MKK+GIKPD +TF +L AC H G V+
Sbjct: 411 MSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEE 470
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
+ F SM YGI P +EHY C + L R G+++E E+ + MPF P + + C
Sbjct: 471 GRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSAC 530
Query: 657 RKNGYATLGEWAARRLNELNP 677
R + GE AA + +L+P
Sbjct: 531 RVHSDVERGERAAENVLKLDP 551
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 240/461 (52%), Gaps = 34/461 (7%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V ++ L Q CA +++ + R++ + ++ P +L N + Y KCG+L DAR +
Sbjct: 45 VYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRV 104
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD + +R+ SW AM+ A+ + + M +G +++T+ ++L + L
Sbjct: 105 FDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELL 164
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+ +++H IV+ G + +SLV Y KC ++ AR +FD + KN V+W +++ Y
Sbjct: 165 QLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGY 224
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G A+ + M + ++ P TFA+ L C+ ++ G ++H II+ + +
Sbjct: 225 AQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGREL 284
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V+ SL MY KCG LE+AR L R++++WT++V+GYA G EA LF M ++
Sbjct: 285 WVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQ 344
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ D++T +L C+ + ++ GK +H
Sbjct: 345 GI-------------------------------KPDKMTFTSVLTSCSSPAFLQEGKRIH 373
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG-YARRGQ 458
+ Y+ ++++ +AL+ MY KCG++ A + F QMS+ R+ V+W A++TG A+ G+
Sbjct: 374 QQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE-RNVVAWTAIITGCCAQHGR 432
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
EA+ F +M+ + +P K TF ++L+AC ++ +E+G++
Sbjct: 433 CREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 473
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G+ +EA+ + M + TR F LL CA + SLEQG+++H ++++ + N
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L+ +Y KC L A RVF +++ +MI F + EA + + MK G
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 574 IKPDHITFHGILLA 587
KPD +TF +L A
Sbjct: 144 CKPDKVTFVSLLNA 157
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 350/666 (52%), Gaps = 48/666 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT---PPVFLLNRAIECYGKCGNLDD 95
P Y+ + + C+ ++ + R LE + T + +F+ + + + K G+L
Sbjct: 204 PTEYTFGSLVTTACSLTEP--DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--- 152
AR +F++M R+ + N ++ + + +LF+DMN S + + +Y +L S
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPE 320
Query: 153 --SAEELELGVSKQLHGLIVKRGFCGNVI-LESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
AEE+ L +++HG ++ G ++ + + LV+ Y KC + DARR+F + +K++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
VSWN ++ G EAV + M R DI P +FT ++L +C+ L G QIHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+K+ G D+ N+ ++++ YA +G + E
Sbjct: 441 SLKL---GIDL----------------------------NVSVSNALMTLYAETGYLNEC 469
Query: 330 RELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
R++F+ MPE + +SWN+++ RS EA+ ++ + ++++T +L+ +
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
LS ++GK++HG +N+ + NAL+ Y KCG + F +M++RRD V+WN+
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 449 VLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++GY +A+ + +Q R F + T+L+A A++++LE+G ++H +R C
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E +VV ALV++Y+KC L+YA+R F + NSMI G+ + +G EAL++F
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 568 LMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
MK +G PDH+TF G+L AC H G ++ + F+SM YG+ P++EH+ CM + R
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNG-YATLGEWAARRLNELNPWAPFQFK 684
G + +LEDF+ +MP P V + R + CR NG A LG+ AA L +L P +
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 829
Query: 685 ITTNRF 690
+ N +
Sbjct: 830 LLGNMY 835
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 269/589 (45%), Gaps = 37/589 (6%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
AR S L V+L N I Y + G+ AR +FDEMP R+ SW ++ Y++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV--SKQLHGLIVKRGFCGNV 178
NG L DM G+ +NQ + +VLR+ E +G+ +Q+HGL+ K + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 179 ILESSLVDAYGKCMVMTD-ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
++ + L+ Y KC+ A F DI+ KN+VSWN I+ Y AG+ + A +F M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ RP +TF + + L+ P + QI I K D V L + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
AR + +Q + RN ++ ++ G EA +LF +M N+M+ S
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM--------NSMIDVSPES- 310
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVS 414
+V L+ + +GL K G+EVHG + + +
Sbjct: 311 -------YVILLSSFPEYSLAEEVGL-----------KKGREVHGHVITTGLVDFMVGIG 352
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWET 473
N L++MY KCG++ AR FY M+ +D VSWN+++TG + G EA+ + M + +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P FT + L++CA++ + G+QIH ++ ++NV AL+ +Y + L +
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 534 VFKESSSLDVIICNSMILGFCHNERG-REALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+F D + NS+I +ER EA+ F ++ G K + ITF +L A
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L Q + K I + +I Y + G M E +RM
Sbjct: 532 FGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 223/498 (44%), Gaps = 44/498 (8%)
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
G ++ H + K +V L ++L++AY + AR++FD++ +N VSW IV Y
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP--YEGMQIHGVIIKIDFEG 277
G KEA+V M++E I + F + L AC + S G QIHG++ K+ +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 278 DDVVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV L MY KC G + A + +N +SW SI+S Y+ +G R A +F+ M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE--IKM 394
Y S R T + T G ++ L+E +++
Sbjct: 198 Q-------------YDGS-------------RPT-----EYTFGSLVTTACSLTEPDVRL 226
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+++ I ++ +++FV + L+ + K G+L AR F QM + R+ V+ N ++ G
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLV 285
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANIS-----SLEQGKQIHCFVIRN-CY 508
R+ EEA F +M S ++ LL++ S L++G+++H VI
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ V LV +Y KC + A RVF + D + NSMI G N EA+E +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M++ I P T L +C KL Q K GI + ++ LY G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETG 464
Query: 629 YMKELEDFVNRMPFNPTV 646
Y+ E + MP + V
Sbjct: 465 YLNECRKIFSSMPEHDQV 482
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 145/304 (47%), Gaps = 15/304 (4%)
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H +++N ++++ N L++ Y + G+ SAR F +M R + VSW +++GY+R G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACIVSGYSRNGE 82
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ--GKQIHCFVIRNCYEINVVCR 515
+EA+ +M E +++ F ++L AC I S+ G+QIH + + Y ++ V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 516 GALVEVYTKCC-CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
L+ +Y KC + YA+ F + + + NS+I + R A +F M+ +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 575 KPDHITFHGIL-LAC-IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+P TF ++ AC + E +V+L Q +++ K G++ L ++ + + G +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ-KSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW---APFQFKITTNR 689
N+M V + + R+ GE A + ++N +P + I +
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQK----WGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 690 FDRY 693
F Y
Sbjct: 318 FPEY 321
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L++ + + +YA + AS + ++ + V V + + ++ Y KCG L
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLR- 151
D A F+ MP R+ SWN+M+ Y ++G L+LF M G + + +T+ VL
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 152 -SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
S A LE G K + G + S + D G+ + +D K +
Sbjct: 731 CSHAGLLEEGF-KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK----LEDFIEKMPM 785
Query: 211 SWNVIVRRYLV----------AGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
NV++ R ++ A GK+A M F++ E+ +N+ ++A
Sbjct: 786 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN--AVNYVLLGNMYA 836
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/692 (28%), Positives = 342/692 (49%), Gaps = 40/692 (5%)
Query: 4 NAATILKNILSKSSPK----PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIV 59
N ++I K L ++ K T S + K + + +D+ ++ L + + Q C +
Sbjct: 5 NLSSIYKCFLPSTTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVS-ILQTCTDPSGLS 63
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ R+ + ++ L + + Y CG DA+ +F ++ WN M+ +T
Sbjct: 64 QGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFT 123
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G L + M G ++ T+ V+++ + + + +H I GF +V
Sbjct: 124 MMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVF 183
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ SSL+ Y + + DAR +FD + +K+ V WNV++ Y+ G+ A +F +M R +
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE 243
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS--LTEMYVKCGRLED 297
P + TFA L C+ G Q+HG+++ E D V + L ++Y KC +E
Sbjct: 244 TNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEM 303
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR + DQ +I+ T AM++GY + +
Sbjct: 304 ARKIFDQRTPVDIVVCT-------------------------------AMISGYVLNGMN 332
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
AL+ + + + VTL +L CAGL+ + +GKE+HG I +N + + +V +A+
Sbjct: 333 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 392
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+DMY KCG L A F +S + D V WN+++T ++ G+ EEA+ F +M T+
Sbjct: 393 MDMYAKCGRLDLAHQTFIGISDK-DAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYD 451
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+ L+ACAN+ +L GK+IH F++R + ++ AL+++Y+KC L+ A RVF
Sbjct: 452 CVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFD 511
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ + NS+I + ++ R +++L +F M +GI+PDH+TF I+ AC H G V
Sbjct: 512 TMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDE 571
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
+ +F M + GI+ ++EHY CM+ L+ R G + E +N MPF+P + + C
Sbjct: 572 GIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGAC 631
Query: 657 RKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
R +G L E A+R L +L+P + + +N
Sbjct: 632 RLHGNVELAEVASRNLFDLDPQNSGYYVLLSN 663
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 313/636 (49%), Gaps = 79/636 (12%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L NR ++ Y +CG++ DA LFDEMP R+ SWN M+ Y ++G R++ LF M++
Sbjct: 43 LANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSN-- 100
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
K + NV+ + K M AR
Sbjct: 101 --------------------------------KNDYSWNVVFS-----GFAKAGEMEIAR 123
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN------FTFANALF 252
R+F+++ N+N V WN ++ Y G+ +EAV +F ++ ++ PL+ F A +
Sbjct: 124 RLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKEL---NLDPLDKSCCDTFVLATVIG 180
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
AC+ L G QIH I+ + E D V+ SL +Y KCG L+ A +L+ +E + S
Sbjct: 181 ACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFS 240
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+++++GYA GR+ +AR F V+ WN++++GY + EA M+K
Sbjct: 241 LSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGL 300
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+D TL IL+ C+ L + GK++H + + + V++A +D Y KCG+L A
Sbjct: 301 KVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACK 360
Query: 433 WFYQMSQ------------------------------RRDKVSWNAVLTGYARRGQSEEA 462
F ++ + +SWN+++ G ++ G EA
Sbjct: 361 LFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEA 420
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F M + + R ++F ++++ACA+ISSLE G+QI + + V +LV+
Sbjct: 421 LDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDF 480
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC +E ++F D I NSM++G+ N G EAL +F M+ G++P ITF
Sbjct: 481 YCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITF 540
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G+L AC H G VK ++F+ M+ Y I P +EHY CM+ L+ R G ++E + + RMP
Sbjct: 541 TGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMP 600
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F M + C +G LGE A+++ EL+P
Sbjct: 601 FEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDP 636
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 213/518 (41%), Gaps = 130/518 (25%)
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S ++G Q+H + K + L + L +MY +CG + DA L D+ RN SW +++
Sbjct: 20 SIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMI 79
Query: 318 -------------------------------SGYAISGRIREARELFNEMPERNVISWNA 346
SG+A +G + AR LFNEMP RN + WN+
Sbjct: 80 EGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNS 139
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKD------IDQVTLGLILNVCAGLSEIKMGKEVHG 400
M+ Y R+ +EA V L ++ D D L ++ C L EI+ GK++H
Sbjct: 140 MIHSYARNGSPREA---VRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHA 196
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD------------------ 442
I ++ + ++++L+++Y KCG+L SA M + D
Sbjct: 197 RILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMND 256
Query: 443 ------------KVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACAN 489
V WN++++GY + EA F++MQ + F T T+L+AC++
Sbjct: 257 ARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSS 316
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC--- 546
+ + + GKQ+H + + + V A ++ Y+KC L A ++F E + D I+
Sbjct: 317 LCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSM 376
Query: 547 ----------------------------NSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
NSMI+G N EAL++F +M K ++ +
Sbjct: 377 ITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNR 436
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
++ AC +++L Q F + G+ ++ YC+ G+
Sbjct: 437 FNLTSVISACASISSLELGEQIF-ARATVVGLDSDEVISTSLVDFYCKCGF--------- 486
Query: 639 RMPFNPTVPMLRKIFDKCRKN----------GYATLGE 666
+ + RK+FD K+ GYAT G
Sbjct: 487 -------IEIGRKLFDTMMKSDEISWNSMLMGYATNGH 517
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+ V S + + C S + +A KL S L T+ LLN I Y G ++DA+
Sbjct: 338 DNVVASAFIDAYSKCGS---LNDACKLFSELKTY----DTILLNSMITVYSNSGKIEDAK 390
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F+ MP + SWN+M+ +QNG P L+LF MN + N+ +V+ + A
Sbjct: 391 QIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASIS 450
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + +Q+ G + ++ +SLVD Y KC + R++FD + + +SWN ++
Sbjct: 451 SLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLM 510
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+G EA+ +F +M +RP TF L AC EG + I++ D+
Sbjct: 511 GYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFN-IMQYDYHI 569
Query: 278 DDVV--LGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGR 325
D + + +++ + G LE+A L+ + P E + W+S++ G G
Sbjct: 570 DPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGE 620
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 133/357 (37%), Gaps = 98/357 (27%)
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVH-GFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
D+D L L I GK++H F + S + ++N LL MY +CG++ A
Sbjct: 2 DLDLQNLARFLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAH 61
Query: 432 IWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSEE 461
F +M R ++ SWN V +G+A+ G+ E
Sbjct: 62 KLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEI 121
Query: 462 AMTSFSEMQ------WET---------RPSK--------------------FTFETLLAA 486
A F+EM W + P + F T++ A
Sbjct: 122 ARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGA 181
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC-------CCLEY--------- 530
C ++ ++ GKQIH ++ + E++ V +L+ +Y KC C L
Sbjct: 182 CTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSL 241
Query: 531 ---------------AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
A R F S+ V++ NS+I G+ N EA +F M+K+G+K
Sbjct: 242 SALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLK 301
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
D T IL AC N + Q + CK G+I I Y + G + +
Sbjct: 302 VDFSTLATILSACSSLCNSQHGKQMH-AYACKVGLICDNVVASAFIDAYSKCGSLND 357
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 318/635 (50%), Gaps = 36/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QLCA K++ + +++ S +++ + L + + Y CG+L R +FD++
Sbjct: 372 YCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIM 431
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
WN ++ Y + G ++ LF M GV N T+ VL+ A ++ K+
Sbjct: 432 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++K GF N + +SL+ AY K + A +FD++ + VSWN ++ +V G
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ +F +ML + T + L A + + + G +HG +K F + V +
Sbjct: 552 SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT 611
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG L A E+F +M + ++SW
Sbjct: 612 LLDMYSKCGNLNGAT-------------------------------EVFVKMGDTTIVSW 640
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ +A Y R L+ +A+ M+ D T+ I++ CA S + G++VH ++ +
Sbjct: 641 TSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 700
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N SN+ V+NAL++MY KCG++ AR+ F ++ + D VSWN ++ GY++ EA+
Sbjct: 701 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNSLPNEALE 759
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVY 522
F +MQ + +P T +L ACA +++L++G++IH ++R Y +++V C ALV++Y
Sbjct: 760 LFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC--ALVDMY 817
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L A +F D+I MI G+ + G EA+ F M+ GI+PD +F
Sbjct: 818 AKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFS 877
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
IL AC H G + +FF+SMR + G+ P+LEHY C++ L R G + + F+ MP
Sbjct: 878 VILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPI 937
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR + L E A + EL P
Sbjct: 938 KPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 972
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 235/478 (49%), Gaps = 36/478 (7%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA + + + G +EL + N +Y +VL+ AE+ L K++H +I+
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + L + LV Y C + R++FD I N WN+++ Y GN +E+V +
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F KM + + +TF L + L E ++HG ++K+ F + V+ SL Y K
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
G +E A L D+ E +++SW S+++G ++G E+F +M ++ G
Sbjct: 518 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM----------LILGV 567
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++D TL +L A + + +G+ +HGF + +S +
Sbjct: 568 ---------------------EVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEV 606
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
SN LLDMY KCGNL A F +M VSW + + Y R G +A+ F EMQ
Sbjct: 607 VFSNTLLDMYSKCGNLNGATEVFVKMGDTT-IVSWTSTIAAYVREGLYSDAIGLFDEMQS 665
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+ RP +T +++ ACA SSL++G+ +H +VI+N N+ AL+ +Y KC +E
Sbjct: 666 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A VF + D++ N+MI G+ N EALE+F M+K+ KPD IT +L AC
Sbjct: 726 ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPAC 782
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 194/443 (43%), Gaps = 41/443 (9%)
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
QN+NA + ++ G+ + A+ + K ++ LN ++ + L C+ S +G
Sbjct: 337 QNQNAK-----INKFCEMGDLRNAIELLTKSKSYEL-GLN-SYCSVLQLCAEKKSLEDGK 389
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++H VII D+ + L MYV CG L R + D+ + W ++S YA G
Sbjct: 390 RVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIG 449
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
RE+ LF +M + V+ + T +L
Sbjct: 450 NFRESVSLFKKMQKLGVVG-------------------------------NCYTFTCVLK 478
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
A L ++K K VHG++ + + SN V N+L+ Y K G + SA F ++S+ D V
Sbjct: 479 CFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVV 537
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWN+++ G G S + F +M T ++L A ANI +L G+ +H F
Sbjct: 538 SWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFG 597
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ C+ VV L+++Y+KC L A VF + ++ S I + +A+
Sbjct: 598 VKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAI 657
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F M+ +G++PD T I+ AC ++ S K G+ L +I +
Sbjct: 658 GLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD-VHSYVIKNGMGSNLPVTNALINM 716
Query: 624 YCRYGYMKELEDFVNRMPFNPTV 646
Y + G ++E +++P V
Sbjct: 717 YAKCGSVEEARLVFSKIPVKDIV 739
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/613 (30%), Positives = 308/613 (50%), Gaps = 37/613 (6%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
ARKL + P +F N I Y K GNL +AR LFD M +R +W ++G Y Q
Sbjct: 120 ARKLFDEM----PHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQ 175
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
N LF++M G+ + ++ A +L E + +Q+H ++K G+ +++
Sbjct: 176 NNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVV 235
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
+SL+D+Y K + A ++F+DI +++V++N ++ Y G +EA+ +FFKM
Sbjct: 236 SNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGY 295
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
RP FTFA L A L G Q+HG ++K +F + V +L + Y K
Sbjct: 296 RPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSK--------- 346
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
R+ EA +LF EMPE + IS+N ++ Y + KE+
Sbjct: 347 ----------------------HDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKES 384
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
L+ ++ T D +L++ A + +G+++H D S I V N+L+DM
Sbjct: 385 LELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDM 444
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFT 479
Y KCG A F ++ + V W A+++ Y ++G E+ + F EMQ + T
Sbjct: 445 YAKCGEFGEANRIFSDLAIQ-SSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAAT 503
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+ +++ ACA+++SL GKQ+H +I + Y NV ALV++Y KC ++ A+++F+E
Sbjct: 504 YASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP 563
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
+ + N++I + N G L +F M + G++PD ++ IL AC H G V+ LQ
Sbjct: 564 VRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQ 623
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
+FDSM Y ++P+ EHY I + CR G E E + +MPF P M + + C +
Sbjct: 624 YFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIH 683
Query: 660 GYATLGEWAARRL 672
L + AA +L
Sbjct: 684 KNQELAKKAANQL 696
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 231/472 (48%), Gaps = 43/472 (9%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
++ E R++ S+++ + + N ++ Y K +L A LF+++PERD ++NA+L
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLT 272
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
Y++ GF + LF M G + T+A +L + + ++ +Q+HG +VK F
Sbjct: 273 GYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW 332
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
NV + ++L+D Y K + +A ++F ++ + +S+NV+V Y G KE++ +F ++
Sbjct: 333 NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
NF FA L + + G QIH I D + +V SL +MY KCG
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFG 452
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+A + ++ + WT+++S Y G + +LF EM +
Sbjct: 453 EANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKI--------------- 497
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
D T I+ CA L+ + +GK++H I + Y SN+F +A
Sbjct: 498 ----------------GADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA 541
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
L+DMY KCG+++ A F +M R+ VSWNA+++ YA+ G + + F EM + +P
Sbjct: 542 LVDMYAKCGSIKDALQMFQEMPV-RNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQP 600
Query: 476 SKFTFETLLAACANISSLEQGKQ-------IHCFVIRNCY---EINVVCRGA 517
+ ++L AC++ +E+G Q I+ V + + I+++CRG
Sbjct: 601 DSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGG 652
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 196/392 (50%), Gaps = 3/392 (0%)
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L++P + + IIK F + L + +++ G L AR L D+ +NI S ++
Sbjct: 79 LTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTM 138
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GY SG + EAR LF+ M +R ++W ++ GY ++ ++EA M + D D
Sbjct: 139 IMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDH 198
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V+L +L+ + ++VH + + Y S + VSN+LLD Y K +L A F
Sbjct: 199 VSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFND 258
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+ + RD V++NA+LTGY++ G + EA+ F +MQ RP++FTF +L A + +E
Sbjct: 259 IPE-RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEF 317
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+Q+H FV++ + NV AL++ Y+K + A ++F E +D I N ++ +
Sbjct: 318 GQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAW 377
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
N R +E+LE+F ++ G + F +L N+ + Q S I ++
Sbjct: 378 NGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQ-IHSQTIVTDAISEIL 436
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
++ +Y + G E + + +VP
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP 468
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/557 (25%), Positives = 248/557 (44%), Gaps = 73/557 (13%)
Query: 130 LFLDMNHSGVSANQITYA---NVLRSSAEELELGVSK---QLH--GLIVKRGFCGNVILE 181
+F + H G ++T + N+++ L ++ LH I+K GF N
Sbjct: 45 IFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRS 104
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN----------------- 224
+ LV ++ + + AR++FD++ +KN S N ++ Y+ +GN
Sbjct: 105 NFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAV 164
Query: 225 --------------GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+EA +F +M R I P + + A L + S E Q+H +
Sbjct: 165 TWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHV 224
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
IK+ ++ VV SL + Y K L A L + ER+ +++ ++++GY+ G REA
Sbjct: 225 IKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAI 284
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LF +M E GY R T + T IL L
Sbjct: 285 NLFFKMQE----------VGY----------------RPT-----EFTFAAILTAGIQLD 313
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+I+ G++VHGF+ + ++ N+FV+NALLD Y K + A FY+M + D +S+N ++
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPE-VDGISYNVLV 372
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
T YA G+ +E++ F E+Q+ + F F TLL+ A +L+ G+QIH I
Sbjct: 373 TCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAI 432
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
++ +LV++Y KC A R+F + + + +MI + + L++F M
Sbjct: 433 SEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEM 492
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
++ I D T+ I+ AC ++ L Q + G I + ++ +Y + G
Sbjct: 493 QRAKIGADAATYASIVRACASLASLTLGKQLHSHI-IGSGYISNVFSGSALVDMYAKCGS 551
Query: 630 MKELEDFVNRMPFNPTV 646
+K+ MP +V
Sbjct: 552 IKDALQMFQEMPVRNSV 568
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 157/319 (49%), Gaps = 6/319 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L + A S + R++ S + + + N ++ Y KCG +A +F ++
Sbjct: 403 FATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLA 462
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ W AM+ +Y Q G L+LF++M + + A+ TYA+++R+ A L + KQ
Sbjct: 463 IQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQ 522
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I+ G+ NV S+LVD Y KC + DA +MF ++ +N+VSWN ++ Y G+
Sbjct: 523 LHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGD 582
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
G + +F +M+R ++P + + + L ACS EG+Q + +I
Sbjct: 583 GDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYA 642
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGR----IREARELFNEMPE 338
S +M + GR ++A L+ Q P E + I W+S+++ I + A +LFN
Sbjct: 643 STIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVL 702
Query: 339 RNVISWNAMLAGYTRSLLW 357
R+ + M Y + W
Sbjct: 703 RDAAPYVTMSNIYAAAGEW 721
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 182/539 (33%), Positives = 283/539 (52%), Gaps = 41/539 (7%)
Query: 146 YANVLRSSAEE------LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
Y++V R +E LE G +++H I+K G N LE++L+ Y KC +TDARR
Sbjct: 95 YSDVFRGLLQECARLRSLEQG--REVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARR 152
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD I+++N VSW ++ ++ EA + M +P TF + L A +
Sbjct: 153 VFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPEL 212
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G ++H I K E + V SL MY KC
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKC--------------------------- 245
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
G I +A+ +F+++PE+NV++W ++AGY + AL+ + M++ +++T
Sbjct: 246 ----GDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY 301
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
IL C ++ GK+VH +I ++ Y I+V NAL+ MY KCG L+ AR F +
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R D V+W A++TGYA+ G +EA+ F MQ + +P K TF + L +C++ + L++GK
Sbjct: 362 R-DVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKS 420
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH ++ Y ++V + ALV +Y KC ++ A VF + S +V+ +MI G + R
Sbjct: 421 IHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGR 480
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
REALE F MKK+GIKPD +TF +L AC H G V+ + F SM YGI P +EHY
Sbjct: 481 CREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYS 540
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C + L R G+++E E+ + MPF P + + CR + GE AA + +L+P
Sbjct: 541 CFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDP 599
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 239/460 (51%), Gaps = 33/460 (7%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V ++ L Q CA +++ + R++ + ++ P +L N + Y KCG+L DAR +
Sbjct: 94 VYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRV 153
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD + +R+ SW AM+ A+ + + M +G +++T+ ++L + L
Sbjct: 154 FDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELL 213
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
V +++H I K G + +SLV Y KC ++ A+ +FD + KN V+W +++ Y
Sbjct: 214 QVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGY 273
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G A+ + KM + ++ P T+ + L C+ + G ++H II+ + +
Sbjct: 274 AQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREI 333
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V+ +L MY KCG L++AR L R++++WT++V+GYA G EA +LF M ++
Sbjct: 334 WVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQ 393
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ D++T L C+ + ++ GK +H
Sbjct: 394 GI-------------------------------KPDKMTFTSALTSCSSPAFLQEGKSIH 422
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ YS ++++ +AL+ MY KCG++ AR+ F QMS+ R+ V+W A++TG A+ G+
Sbjct: 423 QQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSE-RNVVAWTAMITGCAQHGRC 481
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
EA+ F +M+ + +P K TF ++L+AC ++ +E+G++
Sbjct: 482 REALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 202/418 (48%), Gaps = 37/418 (8%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y KCG++ A+ +FD++PE++ +W ++ Y Q G LEL M + V+ N+ITY
Sbjct: 242 YAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY 301
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
++L+ L L K++H I++ G+ + + ++L+ Y KC + +AR++F D+ +
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V+W +V Y G EA+ +F +M ++ I+P TF +AL +CS + EG I
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSI 421
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H ++ + D + +L MY KCG ++DAR + +Q ERN+++WT++++G A GR
Sbjct: 422 HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRC 481
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
REA E F +M ++ + D+VT +L+ C
Sbjct: 482 REALEYFEQMKKQGI-------------------------------KPDKVTFTSVLSAC 510
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+ ++ G++ H DY V + +D+ + G+L A M +
Sbjct: 511 THVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPS 569
Query: 445 SWNAVLTG---YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI 499
W A+L+ ++ + E A + ++ + + + AA E+ +Q+
Sbjct: 570 VWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQV 627
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 195/391 (49%), Gaps = 39/391 (9%)
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R D + N VS ++ ++ G KEA+ + M+ + R + F L C+ L
Sbjct: 57 RKVDTLANSGDVS--ILCKQ----GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLR 110
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S +G ++H I+K + + + +L MY KCG L DAR + D +RNI+SWT+++
Sbjct: 111 SLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIE 170
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+ + EA + + M LAG D+VT
Sbjct: 171 AFVAGNQNLEAYKCYETMK----------LAGCKP---------------------DKVT 199
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+LN +++G++VH I + V +L+ MY KCG++ A++ F ++
Sbjct: 200 FVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP 259
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGK 497
+ ++ V+W ++ GYA++GQ + A+ +MQ E P+K T+ ++L C +LE GK
Sbjct: 260 E-KNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
++H ++I++ Y + AL+ +Y KC L+ A ++F + DV+ +M+ G+
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLAC 588
EA+++F M+++GIKPD +TF L +C
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSC 409
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 17/313 (5%)
Query: 358 KEALDFV-FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
KEAL + ++ + T+ V GL L CA L ++ G+EVH I ++ N ++ N
Sbjct: 78 KEALGILNTMILQGTRVYSDVFRGL-LQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRP 475
LL MY KCG+L AR F + + R+ VSW A++ + Q+ EA + M+ +P
Sbjct: 137 LLSMYAKCGSLTDARRVFDGI-RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
K TF +LL A N L+ G+++H + + E+ +LV +Y KC + A +F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ +V+ +I G+ + ALE+ M++ + P+ IT+ IL C
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGC----TTP 311
Query: 596 LALQFFDSMR---CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
LAL+ + + G ++ +I +YC+ G +KE +P V +
Sbjct: 312 LALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMV 371
Query: 653 FDKCRKNGYATLG 665
GYA LG
Sbjct: 372 ------TGYAQLG 378
>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
Length = 779
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/636 (29%), Positives = 317/636 (49%), Gaps = 38/636 (5%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ + R++ ++ + L N ++ Y K G +D+A + EMP+RD SWN M+
Sbjct: 173 LTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISG 232
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Y Q+G L M G+S ++TYA +L + + E +LG K +H +V G +
Sbjct: 233 YAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRD 292
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+++S L+ YGKC + D +R ++ +N ++WN I+ Y + +A+ F +M
Sbjct: 293 EVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQL 352
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
E ++ TF L CS + +G+ +H I ++ FE +V SLT MY KCG L+
Sbjct: 353 EGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLD- 410
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR++F EMP RN +SWN++++ +
Sbjct: 411 ------------------------------AARKMFEEMPSRNSVSWNSLMSAAIQHGCH 440
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+A F M+ D+VT +L+ C + K G +H + + + V+NAL
Sbjct: 441 ADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANAL 500
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK 477
+ MY K G+ +AR F M++R + VSWN +L Y +G + +A+ F +M + K
Sbjct: 501 IFMYAKLGDHEAARNVFDAMAER-NTVSWNTILAAYVEKGLNRDAVEMFWKM--DVARDK 557
Query: 478 FTFETLLAACANISS-LEQGKQIHCFVIRNCYE--INVVCRGALVEVYTKCCCLEYAIRV 534
T+ L AC+ ++ L GK IH +++ + + ++ V ALV +Y KC L+ A ++
Sbjct: 558 VTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKI 617
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F DV+ S+I+ + + +AL++ +M++EG+K D + F IL C H G +
Sbjct: 618 FDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGCDHSGLL 677
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ ++F SM YGI P+LEHY C+I + R G++ E V+R+P + +
Sbjct: 678 EEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLA 737
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR +G G+ AARR+ L+P P + + +N +
Sbjct: 738 ACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 773
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/563 (27%), Positives = 274/563 (48%), Gaps = 41/563 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG-RTLELFLDMNHSGVSANQIT 145
YGKCG+LD A +F ++ +W+A+LGAY + + LEL+ M GV + +T
Sbjct: 2 YGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSVT 61
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ L++ E LG +++H I + G ++ ++L++ YGKC DA ++F ++
Sbjct: 62 FVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRME 121
Query: 206 NKNAVSWNVIVRRYLVAGN-GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ N VSW ++ + G+ G+E+V++F KM E IRP T L AC+ +G
Sbjct: 122 SPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLT----DGR 177
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+HG +++ D + +L +MY K G +++A +L + +R++ISW ++SGYA SG
Sbjct: 178 QVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSG 237
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+E LW+ M++ +VT +LN
Sbjct: 238 DCKEGLR-----------------------CLWR--------MQQDGLSPTKVTYATLLN 266
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C+ ++ GK +H + + V + LL MY KCG+L + ++ + R+ +
Sbjct: 267 ACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHE-RNTI 325
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+WN ++ YAR +A+ SF +MQ E + TF +L C++ + L QG +H ++
Sbjct: 326 AWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWI 385
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+ +E +++ +L +Y KC L+ A ++F+E S + + NS++ + +A
Sbjct: 386 SQLGFE-SIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAH 444
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+ F MK EG +PD +T +L AC + N K M + G + +I +
Sbjct: 445 KFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIH-QMVVESGFDKRTGVANALIFM 503
Query: 624 YCRYGYMKELEDFVNRMPFNPTV 646
Y + G + + + M TV
Sbjct: 504 YAKLGDHEAARNVFDAMAERNTV 526
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 258/542 (47%), Gaps = 42/542 (7%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ C A+ + RK+ +++ ++ N I YGKC + +DA LF M +
Sbjct: 66 LKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNV 125
Query: 109 GSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW +++G + Q G GR ++ LF M G+ N IT VLR+ L +Q+HG
Sbjct: 126 VSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHG 181
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+++ G + L ++LVD Y K + +A + ++ ++ +SWN+++ Y +G+ KE
Sbjct: 182 YVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKE 241
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ ++M ++ + P T+A L ACS EG IH ++ + + D+VV L
Sbjct: 242 GLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLG 301
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG LED + + ERN I+W +I+ YA +A F +M V +
Sbjct: 302 MYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKA---- 357
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
D VT L+L C+ + + G +H +I + +
Sbjct: 358 ---------------------------DAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF 390
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S I V N+L MY KCG+L +AR F +M R+ VSWN++++ + G +A F
Sbjct: 391 ES-IIVHNSLTAMYAKCGSLDAARKMFEEMPS-RNSVSWNSLMSAAIQHGCHADAHKFFQ 448
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ E +RP + T ++L AC ++ ++G IH V+ + ++ AL+ +Y K
Sbjct: 449 RMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLG 508
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
E A VF + + + N+++ + R+A+E+F M + D +T+ L
Sbjct: 509 DHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALD 565
Query: 587 AC 588
AC
Sbjct: 566 AC 567
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 37/309 (11%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L+ A + + D ++ +W++++ YA S E + +
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANS--------------ENDAV----- 41
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+AL+ M+ D VT L C + G++VH I
Sbjct: 42 -----------QALELYKRMQLEGVRPDSVTFVTCLKACTVEGALGDGRKVHAHIRELGL 90
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ-SEEAMTSF 466
++I+ +NAL++MY KC + A F +M + + VSW +V+ +A+ G E++ F
Sbjct: 91 ETDIYAANALINMYGKCRSPEDAFQLFSRM-ESPNVVSWTSVIGNFAQYGHLGRESVLLF 149
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+M+ E RP+ T +L AC +L G+Q+H +V+ ++ ALV++Y K
Sbjct: 150 RKMELEGIRPNLITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKT 205
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
++ A V +E DVI N MI G+ + +E L M+++G+ P +T+ +L
Sbjct: 206 GGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLL 265
Query: 586 LACIHEGNV 594
AC E ++
Sbjct: 266 NACSSEEDL 274
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR-RGQSEEAMTSFSEMQWE-TRPSK 477
MY KCG+L +A F ++ +W+A+L YA + +A+ + MQ E RP
Sbjct: 1 MYGKCGDLDAASEVFGKLDPLH-VAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDS 59
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
TF T L AC +L G+++H + E ++ AL+ +Y KC E A ++F
Sbjct: 60 VTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSR 119
Query: 538 SSSLDVIICNSMILGFC-HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S +V+ S+I F + GRE++ +F M+ EGI+P+ IT +L AC N+
Sbjct: 120 MESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTD 175
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
Q + + G+ ++ +YC+ G + E + + MP
Sbjct: 176 GRQVHGYV-LEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMP 219
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 288/551 (52%), Gaps = 8/551 (1%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
+ +++L S L KQLH + GF +++L LV Y ++ DA + +
Sbjct: 43 SISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNS 102
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
N + WN+++ Y+ G EA+ + +M+ + +RP NFT+ + L AC G
Sbjct: 103 DIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGR 162
Query: 265 QIHGVI-IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++H I + V SL MY K G L+ AR L +Q ER+ +SW I+S YA
Sbjct: 163 EVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASR 222
Query: 324 GRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
G +EA ELF EM E N+I+WN + G ++ +K AL+ + MR+ D+D V +
Sbjct: 223 GLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAM 282
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+ L C+ + IK+G +H R+ + V NAL+ MY +C +LR A I F + +
Sbjct: 283 IIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSI-K 341
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+ +WN++L+GY +SEEA F EM + P+ T ++L CA +++L+QGK+
Sbjct: 342 TKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKE 401
Query: 499 IHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
HC+++R +E ++ +LVE+Y + + A RVF D + S+I G+
Sbjct: 402 FHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQG 461
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
G+ AL++F M K IKPD +T +L AC H G V F+ M YGI+P +EH+
Sbjct: 462 EGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHF 521
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ L+ R G + + + + MP+ PT M + CR +G +GEWAA +L E+ P
Sbjct: 522 SCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKP 581
Query: 678 WAPFQFKITTN 688
P + + N
Sbjct: 582 ENPGYYVLIAN 592
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 222/487 (45%), Gaps = 70/487 (14%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C + K++ + ++L ++ ++ + L+ + + Y L DA + +
Sbjct: 47 LLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVN 106
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN ++ +Y NG G L + +M H GV + TY +VL++ E+L+L +++H
Sbjct: 107 PLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHE 166
Query: 168 LI-VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I G N+ + +SLV YGK + ARR+F+ + ++AVSWN I+ Y G K
Sbjct: 167 SINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWK 226
Query: 227 EAVVMF---------------------------FK--------MLREDIRPLNFTFANAL 251
EA +F FK M R DI L
Sbjct: 227 EAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGL 286
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
ACS + + G IH I+ F+G D V +L MY +C L A L +++
Sbjct: 287 GACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLT 346
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W S++SGY R EA LF EM + +G
Sbjct: 347 TWNSMLSGYTHMDRSEEASFLFREM----------LFSGI-------------------- 376
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSA 430
+ + VT+ IL CA ++ ++ GKE H +I R + + + + N+L++MY + G + SA
Sbjct: 377 -EPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSA 435
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
+ F + +RRDKV++ +++ GY +G+ + A+ F EM + +P + T +L+AC++
Sbjct: 436 KRVFDSL-RRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSH 494
Query: 490 ISSLEQG 496
+ +G
Sbjct: 495 SGLVTEG 501
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 450 LTGYARRGQSEEAMTSFSEMQWETRPSK-----FTFETLLAACANISSLEQGKQIHCFVI 504
L AR+G +A +FS ++ + + +LL +C N+ SL QGKQ+H I
Sbjct: 9 LKDLARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTI 68
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+E ++V LV Y+ L A + S ++ + N +I + +N EAL
Sbjct: 69 SLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALS 128
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+ M +G++PD+ T+ +L AC + ++ + +S+ YG L + ++ +Y
Sbjct: 129 AYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMY 188
Query: 625 CRYGYMKELEDFVNRMP 641
++G + N+MP
Sbjct: 189 GKFGELDAARRLFNQMP 205
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/601 (29%), Positives = 304/601 (50%), Gaps = 35/601 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ N I+ Y + +LD+AR +F+EM RD SWN+++ Y NGF L+++
Sbjct: 156 LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRM 215
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+G+ + T ++VL + + + +HG+I K G G+VI+ + L+ Y K + +
Sbjct: 216 TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLRE 275
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+F + K++V+WN ++ Y G + +V +F M+ + P + + + AC
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQ 334
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G +H +I FE D V L +MY KCG L
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDL--------------------- 373
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A+E+F+ ++ ++WN+++ GYT+S +KE L+ F M K + D
Sbjct: 374 ----------LAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-SFKMMKMERKPDS 422
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT L+L++ + L++I G+ +H + + + + + + N+LLD+Y KCG + F
Sbjct: 423 VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSY 482
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
MS D +SWN V+ +EM+ E P + T +L C+ ++ Q
Sbjct: 483 MSAH-DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQ 541
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IH ++ ++ +E NV AL+E+Y+KC LE I+VFK DV+ ++I F
Sbjct: 542 GKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGM 601
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
G++AL+ F M+ G+ PD + F + AC H G VK L+FFD M+ Y + P++E
Sbjct: 602 YGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRME 661
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R G + + E+F+ MP P + + CR G + + ++++ EL
Sbjct: 662 HYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILEL 721
Query: 676 N 676
N
Sbjct: 722 N 722
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 280/552 (50%), Gaps = 34/552 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP L + L + +S+K + R + S ++T + V + I Y + + +
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSV 74
Query: 98 GLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F + P + WN+++ A T NG + L + +M + + T+ +V+ S A
Sbjct: 75 SVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARI 134
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L+L + +H ++ GF ++ + ++L+D Y + + + +AR +F+++ N+++VSWN ++
Sbjct: 135 LDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLI 194
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G ++A+ M+ K + P FT ++ L AC L + EG+ +HGVI KI
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIA 254
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
GD ++ L MY K RL +AR + + ++ ++W +++ GYA GR + +LF +
Sbjct: 255 GDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMD- 313
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
M+ G+ D +++ + C ++++GK
Sbjct: 314 ----------MIDGFVP---------------------DMLSITSTIRACGQSGDLQVGK 342
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
VH ++ + + + N L+DMY KCG+L +A+ F ++ +D V+WN+++ GY +
Sbjct: 343 FVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF-DTTKCKDSVTWNSLINGYTQS 401
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
G +E + SF M+ E +P TF LL+ + ++ + QG+ IHC VI+ +E ++
Sbjct: 402 GYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGN 461
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+L++VY KC ++ ++VF S+ D+I N++I H + ++ M+ EG+ P
Sbjct: 462 SLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMP 521
Query: 577 DHITFHGILLAC 588
D T GIL C
Sbjct: 522 DEATVLGILPMC 533
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 224/480 (46%), Gaps = 51/480 (10%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNVIVRRYLV 221
+ +H LI+ G +VI L+ Y + + +F I N V WN I+R
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +A+ + +M + ++P FTF + + +C+ + G +H +++ FE D +
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY + L++AR +F EM R+
Sbjct: 159 GNALIDMYSRFVDLDNAR-------------------------------YVFEEMSNRDS 187
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN++++GY + W++ALD R T D T+ +L C L +K G VHG
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV 247
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I + + ++ + N LL MY K LR AR F +M+ +D V+WN ++ GYA+ G+ E
Sbjct: 248 IEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAV-KDSVTWNTMICGYAQLGRHEA 306
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
++ F +M P + + + AC L+ GK +H ++I + +E + V L+++
Sbjct: 307 SVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDM 366
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC L A VF + D + NS+I G+ + +E LE F +MK E KPD +TF
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTF 425
Query: 582 HGIL-----LACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKEL 633
+L LA I++G + C K+G +L ++ +Y + G M +L
Sbjct: 426 VLLLSIFSQLADINQGR---------GIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDL 476
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 11/297 (3%)
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ VH I + S ++ S L+ Y + + S+ F +S + WN+++
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G +A+ ++EM + + +P FTF +++ +CA I LE G +H + +E ++
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL+++Y++ L+ A VF+E S+ D + NS+I G+C N +AL+++ + G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PD T +LLAC VK + + K GI + ++ +Y ++ ++E
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIE-KIGIAGDVIIGNGLLSMYFKFERLREAR 277
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR---LNELNPWAPFQFKITTN 688
++M +V I C GYA LG A ++ ++ + P IT+
Sbjct: 278 RVFSKMAVKDSVTWNTMI---C---GYAQLGRHEASVKLFMDMIDGFVPDMLSITST 328
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 138/306 (45%), Gaps = 7/306 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+ V++ L +F A I + R + +++ F + + N ++ Y KCG +DD
Sbjct: 421 DSVTFVLLLSIFSQLAD---INQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F M D SWN ++ + ++ +M G+ ++ T +L +
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
K++HG I K GF NV + ++L++ Y KC + + ++F ++ K+ V+W ++
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ + G GK+A+ F M + P + F +FACS EG++ +K D+
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR-MKTDYNL 656
Query: 278 DDVV--LGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ + + ++ + G L A +L P + + W +++S G A+ +
Sbjct: 657 EPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSK 716
Query: 335 EMPERN 340
++ E N
Sbjct: 717 KILELN 722
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/650 (29%), Positives = 322/650 (49%), Gaps = 42/650 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER- 106
L + C +SK++ + + + +VT +FL I Y C D A+ +FD M
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQL 165
+ WN ++ YT+N LELF + H + + TY +V ++ + K +
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++K G ++++ SSLV YGKC A +F+++ K+ WN ++ Y +GN
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
K+A+ F M R P + T A+ +C+ L GM+IH +I F D + +L
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG LE A E+F +MP++ V++WN
Sbjct: 249 VDMYGKCGHLE-------------------------------MAIEIFEQMPKKTVVAWN 277
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ---VTLGLILNVCAGLSEIKMGKEVHGFI 402
+M++GY L + + + L ++ + + TL ++ VC+ + + GK VHG+
Sbjct: 278 SMISGYG---LKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYT 334
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
RN ++FV+++L+D+Y KCG + A F ++ + VSWN +++GY G+ EA
Sbjct: 335 IRNRIQPDVFVNSSLMDLYFKCGKVELAEKIF-KLIPKSKVVSWNVMISGYVAEGKLFEA 393
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ FSEM+ TF ++L AC+ +++LE+GK+IH +I + N V GAL+++
Sbjct: 394 LGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDM 453
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++ A VFK D++ SMI + + ALE+F M + +KPD + F
Sbjct: 454 YAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAF 513
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
IL AC H G V +F+ M YGIIP++EHY C+I L R G + E + + + P
Sbjct: 514 LAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNP 573
Query: 642 -FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V +L +F CR + LG AR L + +P + + +N +
Sbjct: 574 EIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMY 623
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 223/465 (47%), Gaps = 34/465 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H +P SY+ Y +F+ C V + + + L+ + + + + YGKC
Sbjct: 98 HYPYLKPDSYT-YPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNA 156
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ A LF+EMPE+D WN ++ Y Q+G LE F M G N +T + S
Sbjct: 157 FEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISS 216
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A L+L ++H ++ GF + + S+LVD YGKC + A +F+ + K V+W
Sbjct: 217 CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAW 276
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ Y + G+ + +F +M E ++P T ++ + CS + EG +HG I+
Sbjct: 277 NSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR 336
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ D V SL ++Y KCG++E A + + ++SW ++SGY G++ EA L
Sbjct: 337 NRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGL 396
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+E MRK+ + D +T +L C+ L+ +
Sbjct: 397 FSE-------------------------------MRKSYVESDAITFTSVLTACSQLAAL 425
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GKE+H I +N V ALLDMY KCG + A ++ +RD VSW +++T
Sbjct: 426 EKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEA-FSVFKCLPKRDLVSWTSMITA 484
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
Y G + A+ F+EM Q +P + F +L+AC + +++G
Sbjct: 485 YGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEG 529
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 304/596 (51%), Gaps = 35/596 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKC +LDDA F MPER+ SW A + QN R LELF++M G+ +Q
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+YA+ RS A L +QLH +K F + ++ +++VD Y K +TDARR F
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N + N ++ + AG G EA+ +F M+R IR + + AC+ ++G
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+H + IK F+ D V ++ ++Y KC L
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL---------------------------- 402
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQVTLGLI 382
EA +F M +++ +SWNA++A ++ + + L F ++R K D T G +
Sbjct: 403 ---MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP-DDFTYGSV 458
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L CA L ++ G VH + ++ S+ FV++ ++DMY KCG + A+ ++ ++
Sbjct: 459 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ- 517
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
VSWNA+L+G++ +SEEA FSEM +P FTF T+L CAN++++E GKQIH
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+I+ + LV++Y KC + ++ VF++ D + N+MI G+ + G E
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F M+KE + P+H TF +L AC H G ++F M Y + PQLEH+ CM+
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R +E F+N MPF + + + C+ + E AA + L+P
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDP 753
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 259/522 (49%), Gaps = 37/522 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y G++ A LFD MP+ D SWNA++ Y Q G +++LF++M GVS
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
++ T+A +L+S + EEL LGV Q+H L VK G +V S+LVD YGKC + DA
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGV--QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F + +N VSW + + + +F +M R + ++A+A +C+ +S
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+H IK F D VV ++ ++Y K L DAR
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR------------------- 305
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
R F +P V + NAM+ G R+ L EA+ M +++ D V+
Sbjct: 306 -----------RAFFG-LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 353
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L + + CA G++VH ++ + +I V+NA+LD+Y KC L A + F M
Sbjct: 354 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK 413
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
Q +D VSWNA++ + G ++ + F+EM ++ +P FT+ ++L ACA + SLE G
Sbjct: 414 Q-KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+H VI++ + +V++Y KC ++ A ++ V+ N+++ GF N+
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
EA + F M G+KPDH TF +L C + ++L Q
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 237/458 (51%), Gaps = 33/458 (7%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
VS YA F+ CA+ + R+L ++ + + + ++ Y K +L DAR
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F +P + NAM+ + G + LF M S + + ++ + V + AE
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 367
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+Q+H L +K GF ++ + ++++D YGKC + +A +F ++ K++VSWN I+
Sbjct: 368 FQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL 427
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G+ + ++ F +MLR ++P +FT+ + L AC+ L S G+ +H +IK D
Sbjct: 428 EQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDA 487
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V ++ +MY KCG +++A+ L D+ + ++SW +I+SG++++ EA++ F+EM +
Sbjct: 488 FVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDM 547
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ D T +L+ CA L+ I++GK++H
Sbjct: 548 GL-------------------------------KPDHFTFATVLDTCANLATIELGKQIH 576
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G I + + + ++S+ L+DMY KCG++ + + F ++ ++RD VSWNA++ GYA G
Sbjct: 577 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV-EKRDFVSWNAMICGYALHGLG 635
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
EA+ F MQ E P+ TF +L AC+++ + G
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 233/537 (43%), Gaps = 69/537 (12%)
Query: 139 VSANQITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
V+ ++T++ V +S A+ E ++V GF N + + L+ Y +C
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVS-GFVPNAFVSNCLLQMYARCAGAA 69
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGN------------------------------- 224
ARR+FD + ++ VSWN ++ Y AG+
Sbjct: 70 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGM 129
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E+V +F +M R + P TFA L +CS L G+Q+H + +K E D +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC L+DA ERN +SW + ++G + + ELF E
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE--------- 240
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M++ + Q + CA +S + G+++H +
Sbjct: 241 ----------------------MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 278
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N +SS+ V A++D+Y K +L AR F+ + + S NA++ G R G EAM
Sbjct: 279 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLVRAGLGIEAMG 337
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M + R + + +ACA QG+Q+HC I++ +++++ A++++Y
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC L A +F+ D + N++I N + + F M + G+KPD T+
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L AC +++ L D + K G+ ++ +YC+ G + E + +R+
Sbjct: 458 VLKACAALRSLEYGLMVHDKV-IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 304/596 (51%), Gaps = 35/596 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKC +LDDA F MPER+ SW A + QN R LELF++M G+ +Q
Sbjct: 191 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 250
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+YA+ RS A L +QLH +K F + ++ +++VD Y K +TDARR F
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N + N ++ + AG G EA+ +F M+R IR + + AC+ ++G
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+H + IK F+ D V ++ ++Y KC L
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL---------------------------- 402
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQVTLGLI 382
EA +F M +++ +SWNA++A ++ + + L F ++R K D T G +
Sbjct: 403 ---MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP-DDFTYGSV 458
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L CA L ++ G VH + ++ S+ FV++ ++DMY KCG + A+ ++ ++
Sbjct: 459 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ- 517
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
VSWNA+L+G++ +SEEA FSEM +P FTF T+L CAN++++E GKQIH
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+I+ + LV++Y KC + ++ VF++ D + N+MI G+ + G E
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F M+KE + P+H TF +L AC H G ++F M Y + PQLEH+ CM+
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R +E F+N MPF + + + C+ + E AA + L+P
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDP 753
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 259/522 (49%), Gaps = 37/522 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y G++ A LFD MP+ D SWNA++ Y Q G +++LF++M GVS
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
++ T+A +L+S + EEL LGV Q+H L VK G +V S+LVD YGKC + DA
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGV--QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F + +N VSW + + + +F +M R + ++A+A +C+ +S
Sbjct: 205 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+H IK F D VV ++ ++Y K L DAR
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR------------------- 305
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
R F +P V + NAM+ G R+ L EA+ M +++ D V+
Sbjct: 306 -----------RAFFG-LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 353
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L + + CA G++VH ++ + +I V+NA+LD+Y KC L A + F M
Sbjct: 354 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK 413
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
Q +D VSWNA++ + G ++ + F+EM ++ +P FT+ ++L ACA + SLE G
Sbjct: 414 Q-KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+H VI++ + +V++Y KC ++ A ++ V+ N+++ GF N+
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
EA + F M G+KPDH TF +L C + ++L Q
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 237/458 (51%), Gaps = 33/458 (7%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
VS YA F+ CA+ + R+L ++ + + + ++ Y K +L DAR
Sbjct: 248 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 307
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F +P + NAM+ + G + LF M S + + ++ + V + AE
Sbjct: 308 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 367
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+Q+H L +K GF ++ + ++++D YGKC + +A +F ++ K++VSWN I+
Sbjct: 368 FQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL 427
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G+ + ++ F +MLR ++P +FT+ + L AC+ L S G+ +H +IK D
Sbjct: 428 EQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDA 487
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V ++ +MY KCG +++A+ L D+ + ++SW +I+SG++++ EA++ F+EM +
Sbjct: 488 FVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDM 547
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ D T +L+ CA L+ I++GK++H
Sbjct: 548 GL-------------------------------KPDHFTFATVLDTCANLATIELGKQIH 576
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G I + + + ++S+ L+DMY KCG++ + + F ++ ++RD VSWNA++ GYA G
Sbjct: 577 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV-EKRDFVSWNAMICGYALHGLG 635
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
EA+ F MQ E P+ TF +L AC+++ + G
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 232/537 (43%), Gaps = 69/537 (12%)
Query: 139 VSANQITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
V+ ++T++ V +S A+ E ++V GF + + L+ Y +C
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVS-GFVPTAFVSNCLLQMYARCAGAA 69
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGN------------------------------- 224
ARR+FD + ++ VSWN ++ Y AG+
Sbjct: 70 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGM 129
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E+V +F +M R + P TFA L +CS L G+Q+H + +K E D +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC L+DA ERN +SW + ++G + + ELF E
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE--------- 240
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M++ + Q + CA +S + G+++H +
Sbjct: 241 ----------------------MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 278
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N +SS+ V A++D+Y K +L AR F+ + + S NA++ G R G EAM
Sbjct: 279 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLVRAGLGIEAMG 337
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M + R + + +ACA QG+Q+HC I++ +++++ A++++Y
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC L A +F+ D + N++I N + + F M + G+KPD T+
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L AC +++ L D + K G+ ++ +YC+ G + E + +R+
Sbjct: 458 VLKACAALRSLEYGLMVHDKV-IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/651 (29%), Positives = 324/651 (49%), Gaps = 50/651 (7%)
Query: 52 CASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
CA +I EA+ + ++ F + L N A Y KC A G+FDEMP+R+
Sbjct: 74 CAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVF 133
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELGVSKQLHG 167
SW M+ T++G + F +M +SG+ ++ Y+ +++S + LELG K +H
Sbjct: 134 SWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG--KMVHA 191
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
IV RGF ++ + +SL++ Y K + D+ +F+ + N VSWN ++ G E
Sbjct: 192 QIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLE 251
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A +F +M P +T + A L G ++ ++ EG+ +V +L +
Sbjct: 252 AFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALID 311
Query: 288 MYVKCGRLEDARGLLDQPDERNIIS------WTSIVSGYAISGRIREARELFNEMPERNV 341
MY KCG L DAR + D N I+ W +++SGY+ SG +EA EL+ +M + +
Sbjct: 312 MYSKCGSLHDARSVFDT----NFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
S D T + N A ++ G+ VHG
Sbjct: 368 TS-------------------------------DLYTYCSVFNAIAASKSLQFGRVVHGM 396
Query: 402 IHRNDYSSNIF-VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + + V+NA+ D Y KCG L R F +M + RD VSW ++T Y++ E
Sbjct: 397 VLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYSQSSLGE 455
Query: 461 EAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ +F M+ E P++FTF ++L +CA++ LE G+Q+H + + + AL+
Sbjct: 456 EALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALI 515
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC + A +VF + S+ D++ ++I G+ + +AL++F M+ GIK + +
Sbjct: 516 DMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAV 575
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
T +L AC H G V+ L +F M YG++P++EHY C+I L R G + + +F+ +
Sbjct: 576 TLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRK 635
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + + + CR +G LGE AAR++ + P + + +N +
Sbjct: 636 MPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTY 686
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 228/456 (50%), Gaps = 36/456 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ + Q C ++ + + + +V +F+ + Y K G+++D+ +F+ M
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E + SWNAM+ T NG +LF+ M + + N T +V ++ + +++ + K+
Sbjct: 230 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 289
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLVA 222
+ + G GNV++ ++L+D Y KC + DAR +FD I WN ++ Y +
Sbjct: 290 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 349
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV-V 281
G +EA+ ++ +M + I +T+ + A + S G +HG+++K + V V
Sbjct: 350 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 409
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++ + Y KCG LED R + D+ +ER+I+SWT++V+
Sbjct: 410 NNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVT----------------------- 446
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
Y++S L +EAL LMR+ +Q T +L CA L ++ G++VHG
Sbjct: 447 --------AYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGL 498
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + + + +AL+DMY KCG++ A F ++S D VSW A+++GYA+ G E+
Sbjct: 499 LCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN-PDIVSWTAIISGYAQHGLVED 557
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
A+ F M+ + + T +L AC++ +E+G
Sbjct: 558 ALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEG 593
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 230/523 (43%), Gaps = 43/523 (8%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGN--VILESSLVDAYGKCMVMTDARRMFDDIQ 205
+VLR AE+ + +K +HGL++K F ++L + Y KC A +FD++
Sbjct: 69 DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 128
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N SW V++ G + F +ML I P F ++ + +C L S G
Sbjct: 129 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 188
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H I+ F V SL MY K G +ED+ + + E N +SW +++SG +G
Sbjct: 189 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG- 247
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
L EA D M+ + TL +
Sbjct: 248 ------------------------------LHLEAFDLFVRMKNGACTPNMYTLVSVSKA 277
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF-YQMSQRRDKV 444
L ++ MGKEV N+ V AL+DMY KCG+L AR F
Sbjct: 278 VGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNT 337
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
WNA+++GY++ G S+EA+ + +M Q +T+ ++ A A SL+ G+ +H V
Sbjct: 338 PWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMV 397
Query: 504 IRNCYEINVV-CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++ ++ VV A+ + Y+KC LE +VF D++ +++ + + G EA
Sbjct: 398 LKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEA 457
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L F LM++EG P+ TF +L++C ++ Q + CK G+ + +I
Sbjct: 458 LATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ-VHGLLCKAGLDTEKCIESALID 516
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+Y + G + E +++ NP + I +GYA G
Sbjct: 517 MYAKCGSITEAGKVFDKIS-NPDIVSWTAII-----SGYAQHG 553
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 153/307 (49%), Gaps = 19/307 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI-ECYGKCGNLDDARGLFDEM 103
Y +F A+SK++ R + ++ V +N AI + Y KCG L+D R +FD M
Sbjct: 374 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 433
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ERD SW ++ AY+Q+ L F M G + NQ T+++VL S A L +
Sbjct: 434 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGR 493
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HGL+ K G +ES+L+D Y KC +T+A ++FD I N + VSW I+ Y G
Sbjct: 494 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 553
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFE 276
++A+ +F +M I+ T LFACS EG+ +GV+ +++
Sbjct: 554 LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH- 612
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR----EARE 331
+ ++ + GRL+DA + + P E N + W +++ G + G + AR+
Sbjct: 613 -----YACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARK 667
Query: 332 LFNEMPE 338
+ + PE
Sbjct: 668 ILSIRPE 674
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/661 (28%), Positives = 324/661 (49%), Gaps = 66/661 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ + + +++ +V VF+ + + Y KC + +A+ +FD MP RD +W
Sbjct: 151 CSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTW 210
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N++ Y GFP + L +F +M GV + +T + +L + ++ +L K +HG +K
Sbjct: 211 NSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G NV + ++LV+ Y C+ + +A+ +FD + ++N ++WN + Y+ G ++ + +
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNV 330
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M ++P ++ L ACS L G IHG VK
Sbjct: 331 FREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHG-------------------FAVK 371
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
G +ED + T++V+ YA +REA+ +F+ MP RNV++WN++ + Y
Sbjct: 372 HGMVED------------VFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCY 419
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++ L+ M D VT+ IL+ C+ L ++K GK +HGF R+ ++
Sbjct: 420 VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV 479
Query: 412 FVSNALLDMYRKCGNLRSARIWF----------------------------YQMSQ---- 439
FV NALL +Y KC +R A++ F Y SQ
Sbjct: 480 FVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRD 539
Query: 440 --RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+ D+++W+ V+ G + + EEAM F +MQ +P + T ++L AC+ L G
Sbjct: 540 EVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMG 599
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K+IHC+V R+ + ++ ALV++Y KC L + VF DV N+MI +
Sbjct: 600 KEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMH 659
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G+EAL +F M +KPD TF +L AC H V+ +Q F+SM + + P+ EH
Sbjct: 660 GNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH 719
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y C++ +Y R G ++E F+ RMP PT + CR L + +A++L E++
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEID 779
Query: 677 P 677
P
Sbjct: 780 P 780
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/583 (26%), Positives = 286/583 (49%), Gaps = 37/583 (6%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K T + + +K D+PV + + + CA+S+ ++ ++ + V + N
Sbjct: 26 KIYTSSRARGIKPDKPV----FMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I YGKC ++ AR +FD++ RD +WN++ Y GFP + L +F M + V AN
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T +++L ++ +L K++HG +V+ G +V + S+ V+ Y KC+ + +A+ +FD
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +++ V+WN + Y+ G ++ + +F +M+ + ++P T + L ACS L G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IHG +K + V +L +Y C + +A+ + D RN+I+W S+ S Y
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G ++ +F EM V D + + IL
Sbjct: 322 GFPQKGLNVFREMGLNGV-------------------------------KPDPMAMSSIL 350
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C+ L ++K GK +HGF ++ ++FV AL+++Y C +R A+ F M R+
Sbjct: 351 PACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPH-RNV 409
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
V+WN++ + Y G ++ + F EM +P T ++L AC+++ L+ GK IH F
Sbjct: 410 VTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGF 469
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+R+ +V AL+ +Y KC C+ A VF +V N ++ + N+ +
Sbjct: 470 AVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKG 529
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
L +F M ++ +K D IT+ ++ C+ ++ A++ F M+
Sbjct: 530 LYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ 572
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 244/522 (46%), Gaps = 34/522 (6%)
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
+G P ++++ G+ ++ + V ++ A + KQ H + G +V +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
++ + AYGKC + ARR+FDD+ ++ V+WN + Y+ G ++ + +F KM +
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+ T ++ L CS L G +IHG +++ D V + Y KC
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC------ 191
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+REA+ +F+ MP R+V++WN++ + Y ++
Sbjct: 192 -------------------------VREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKG 226
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
L+ M D VT+ IL+ C+ L ++K GK +HGF ++ N+FVSNAL+++
Sbjct: 227 LNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNL 286
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
Y C +R A+ F M R+ ++WN++ + Y G ++ + F EM +P
Sbjct: 287 YESCLCVREAQAVFDLMPH-RNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMA 345
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
++L AC+ + L+ GK IH F +++ +V ALV +Y C C+ A VF
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
+V+ NS+ + + ++ L VF M G+KPD +T IL AC ++K +
Sbjct: 406 HRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSG-K 464
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++G++ + ++ LY + ++E + + +P
Sbjct: 465 VIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 3/333 (0%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ + Y + AR +F+++ R+V++WN++ A Y ++ L+ M
Sbjct: 80 AFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ +T+ IL C+ L ++K GKE+HGF+ R+ ++FVS+A ++ Y KC +R A+ F
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
M RD V+WN++ + Y G ++ + F EM + +P T +L+AC+++ L
Sbjct: 200 DLMPH-RDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ GK IH F +++ NV ALV +Y C C+ A VF +VI NS+ +
Sbjct: 259 KSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCY 318
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ ++ L VF M G+KPD + IL AC ++K + K+G++
Sbjct: 319 VNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG-KTIHGFAVKHGMVED 377
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ ++ LY ++E + + MP V
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVFDLMPHRNVV 410
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 164/367 (44%), Gaps = 53/367 (14%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N + Y KC + +A+ +FD +P R+ SWN +L AY N + L +F MN
Sbjct: 479 VFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNR 538
Query: 137 SGVSANQITYA-----------------------------------NVLRSSAEELELGV 161
V A++IT++ ++LR+ + L +
Sbjct: 539 DEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRM 598
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
K++H + + ++ ++LVD Y KC ++ +R +FD + K+ SWN ++ +
Sbjct: 599 GKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGM 658
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF-EGDDV 280
GNGKEA+ +F KML ++P + TF L ACS EG+QI + + E +
Sbjct: 659 HGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAE 718
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR----EARELFNE 335
+ ++Y + G LE+A G + + P E I+W + ++G + + A++LF E
Sbjct: 719 HYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLF-E 777
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ ++ + + LW EA LM++ + G S +G
Sbjct: 778 IDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERG-----------ITKTPGCSWFHVG 826
Query: 396 KEVHGFI 402
VH F+
Sbjct: 827 NRVHTFV 833
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 1/173 (0%)
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+P K F + ACA + KQ H R +V A + Y KC C+E A R
Sbjct: 37 KPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARR 96
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF + + DV+ NS+ + + ++ L VF M +K + +T IL C +
Sbjct: 97 VFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQD 156
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+K + ++G++ + + Y + ++E + + MP V
Sbjct: 157 LKSGKE-IHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVV 208
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 265/484 (54%), Gaps = 33/484 (6%)
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-L 285
EAV + R +R + T A+ L C+ + EG ++H + + L + L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY KCG+ +AR + D+ RN+ SW +++SGYA G I+ AR+LF++MPE++V+SWN
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M+ + + W EAL F R+ + + +L VC L E+ + ++VHG I
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------------- 440
+ SN+ +S+++LD Y KCG + AR F +MS R
Sbjct: 222 GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELF 281
Query: 441 -----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
++ VSW A+++GYAR G +A+ F++M + RP +FTF + L ACA+I+SL+
Sbjct: 282 VEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLK 341
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGF 553
GKQIH +++R ++ N + AL+++Y+KC L +VF + LDV++ N++I
Sbjct: 342 HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISAL 401
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G EA+++ M + G KPD ITF IL AC H G V+ L FF+SM C YGI+P
Sbjct: 402 AQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPS 461
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY C+I L R G +E+ D + +MP+ P + + CR +G+ LG AA RL
Sbjct: 462 QEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLI 521
Query: 674 ELNP 677
EL P
Sbjct: 522 ELEP 525
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 213/393 (54%), Gaps = 14/393 (3%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++++ Y K ++ AR++FD + K+ VSWN +V + G EA+ + + + I+
Sbjct: 130 NNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQ 189
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
F+FA L C L Q+HG I+ F + V+ S+ + YVKCG + DAR L
Sbjct: 190 CNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKL 249
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D+ R++++WT++VSGYA G ++ A ELF EMPE+N +SW A+++GY R+ + +AL
Sbjct: 250 FDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKAL 309
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ M DQ T L CA ++ +K GK++H ++ R ++ N V +AL+DMY
Sbjct: 310 ELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMY 369
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
KCG+L R F M + D V WN +++ A+ G EEA+ +M + +P K TF
Sbjct: 370 SKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITF 429
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR----GALVEVYTKCCCLEYAI-RVF 535
+L AC++ ++QG ++ F +C + +V L+++ + C E + ++
Sbjct: 430 VVILNACSHSGLVQQG--LNFFESMSC-DYGIVPSQEHYACLIDLLGRAGCFEEVMDQLE 486
Query: 536 KESSSLDVIICNSMILGFC----HNERGREALE 564
K D + N++ LG C H E GR+A E
Sbjct: 487 KMPYKPDDRVWNAL-LGVCRIHGHIELGRKAAE 518
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 234/528 (44%), Gaps = 111/528 (21%)
Query: 46 AHLFQLCASSKAIVEARKLESNL-VTFYPTPPVFLLNRAIECYGKCGN------------ 92
A L Q CA S+A+ E +++ +L +T P FL N I Y KCG
Sbjct: 63 ASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMS 122
Query: 93 -------------------LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+ AR LFD+MPE+D SWN M+ A+ Q G+ L + +
Sbjct: 123 ARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSE 182
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G+ N ++A VL + E+G+++Q+HG I+ GF NV+L SS++DAY KC +
Sbjct: 183 FRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGL 242
Query: 194 MTDARRMFDDIQ-------------------------------NKNAVSWNVIVRRYLVA 222
M DAR++FD++ KN VSW ++ Y
Sbjct: 243 MGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARN 302
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G G +A+ +F KM+ +RP FTF++ L AC+ ++S G QIH +++I+F+ + +V+
Sbjct: 303 GMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVV 362
Query: 283 GSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY KCG L R + D ++ +++ W +I+S A G EA ++ ++M
Sbjct: 363 SALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDM----- 417
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV--- 398
+R K D++T +ILN C+ ++ G
Sbjct: 418 -------------------------VRSGAKP-DKITFVVILNACSHSGLVQQGLNFFES 451
Query: 399 ----HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+G + ++ + L+D+ + G +M + D WNA+L
Sbjct: 452 MSCDYGIVPSQEHYA------CLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCR 505
Query: 455 RRGQSE---EAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI 499
G E +A E++ ++ + ++ A S+++ +Q+
Sbjct: 506 IHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQL 553
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 159/373 (42%), Gaps = 73/373 (19%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD--- 101
+A + +C K + R++ ++ V L + ++ Y KCG + DAR LFD
Sbjct: 195 FAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMS 254
Query: 102 ----------------------------EMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
EMPE++ SW A++ Y +NG + LELF
Sbjct: 255 ARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTK 314
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M V +Q T+++ L + A L KQ+H +++ F N I+ S+L+D Y KC
Sbjct: 315 MMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGS 374
Query: 194 MTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ R++FD + NK + V WN I+ G G+EA+ M M+R +P TF L
Sbjct: 375 LGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILN 434
Query: 253 ACSFLSSPYEGMQI-------HGVII--------------------------KIDFEGDD 279
ACS +G+ +G++ K+ ++ DD
Sbjct: 435 ACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDD 494
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV---SGYAISGR---IREARELF 333
V +L + G +E R ++ E S T+ V S YA+ GR +++ R+L
Sbjct: 495 RVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLM 554
Query: 334 NE--MPERNVISW 344
NE + + ISW
Sbjct: 555 NERQVKKERAISW 567
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 200/759 (26%), Positives = 363/759 (47%), Gaps = 82/759 (10%)
Query: 9 LKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNL 68
+ ++S P K TK + L P++ + Y+ + Q SS ++ ++L S+
Sbjct: 1 MHTLVSDPLTLPPLPKHQTKPPNFSLLHTPPLTSTTYSTILQ---SSNSLTLGKQLHSHS 57
Query: 69 VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTL 128
+ F+ + ++ Y + +DA +FD+M ++ SW A+L + G +
Sbjct: 58 IKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGF 117
Query: 129 ELFLDMNHSGVSA--NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
LF + G+ + + VL +L + +Q+HG+++K GF NV + ++L+D
Sbjct: 118 MLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALID 177
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA------------------ 228
YGKC + +A+++ + + K+ VSWN I+ + G EA
Sbjct: 178 MYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVT 237
Query: 229 -----------------VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
V +F +M+ + P T A+ L ACS + + G ++HG I+
Sbjct: 238 WSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIV 297
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ + + V +L MY +CG ++ A + + + S+ +++ GY +G + +A+E
Sbjct: 298 RHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKE 357
Query: 332 LFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
LF +M ER+ ISWN M++G+ + ++ +AL + + D TLG IL A
Sbjct: 358 LFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFA 417
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
++ I+ GKE+H SN FV AL++MY KC ++ +A++ F ++S+ RD +WN
Sbjct: 418 DMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISE-RDTSTWN 476
Query: 448 AVLTGYAR-----------------------------------RGQSEEAMTSFSEMQWE 472
A+++GYAR Q + AM F+EMQ
Sbjct: 477 ALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVS 536
Query: 473 T-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+ RP +T +LAAC+ ++++ +GKQ+H + IR Y+ + LV++Y KC +++
Sbjct: 537 SLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHC 596
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+V+ + S+ +++ N+M+ + + G E + +F M ++PDH+TF +L +C+H
Sbjct: 597 YQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHA 656
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G++K+ + F M Y I P L+HY CM+ L R G + E + MP
Sbjct: 657 GSIKIGYECFYLME-TYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSA 715
Query: 652 IFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ C + LGE AA +L EL P + + N +
Sbjct: 716 LLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLY 754
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/631 (30%), Positives = 317/631 (50%), Gaps = 39/631 (6%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE--RDGG 109
C +K I++ R L + ++ +++ N + Y K +L A LFD + + +D
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 110 SWNAMLGAYTQNGFPGR---TLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQL 165
SWN+++ A++QN + LF M + V N T A V +++ ++ KQ
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H + VK G G+V + SSL++ Y K + DAR++FD + +N VSW ++ Y +
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+AV +F M RE+ F + L A + Y G Q+H + IK V +L
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY KCG L+DA V + SG ++N I+W+
Sbjct: 261 VTMYAKCGSLDDA------------------VRTFEFSG-------------DKNSITWS 289
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AM+ GY + +AL M + + TL ++N C+ L + GK++H F +
Sbjct: 290 AMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKL 349
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ ++V +A++DMY KCG+L AR F + Q+ D V W +++TGY + G E +
Sbjct: 350 GFGLQLYVLSAVVDMYAKCGSLADARKGF-ECVQQPDVVLWTSIITGYVQNGDYEGGLNL 408
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ +MQ E P++ T ++L AC+++++L+QGKQ+H +I+ +++ V AL +YTK
Sbjct: 409 YGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTK 468
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L+ +F S DVI N+MI G N G +ALE+F M EGIKPD +TF +
Sbjct: 469 CGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNL 528
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V ++F M ++ I P +EHY CM+ + R G + E ++F+ +
Sbjct: 529 LSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDH 588
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ + R + C+ + LG +A +L EL
Sbjct: 589 GLCLWRILLGACKNHRNYELGVYAGEKLVEL 619
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 259/529 (48%), Gaps = 43/529 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +++L A +F ++ +V ++ S V + V++ + + Y K G + DAR
Sbjct: 116 PNAHTL-AGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARK 174
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD MPER+ SW M+ Y + + +E+F M N+ +VL + ++
Sbjct: 175 LFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVF 234
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ +Q+H L +K G V + ++LV Y KC + DA R F+ +KN+++W+ +V
Sbjct: 235 VYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTG 294
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G+ +A+ +F KM + P FT + ACS L + EG Q+H K+ F
Sbjct: 295 YAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQ 354
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VL ++ +MY KCG L DAR + + +++ WTSI++GY +G L+ +M
Sbjct: 355 LYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQM 414
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
VI +++T+ +L C+ L+ + GK++
Sbjct: 415 ERVIP-------------------------------NELTMASVLRACSSLAALDQGKQM 443
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I + + + + +AL MY KCG+L + F++M RD +SWNA+++G ++ G
Sbjct: 444 HARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPS-RDVISWNAMISGLSQNGH 502
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR-- 515
+A+ F +M E +P TF LL+AC+++ +++G + + E N+
Sbjct: 503 GNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFD---EFNIAPMVE 559
Query: 516 --GALVEVYTKCCCLEYAIRVFKESSSLDVIICN-SMILGFCHNERGRE 561
+V++ ++ L A + F ES+++D +C ++LG C N R E
Sbjct: 560 HYACMVDILSRAGKLNEA-KEFIESATVDHGLCLWRILLGACKNHRNYE 607
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 13/186 (6%)
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSL 541
L C + ++ +G+ +H +++ ++ + +Y K L +A+ +F +
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 542 DVIICNSMILGFCHNERGRE---ALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLA 597
D + NS+I F N A+ +F +M+ + P+ T G+ A + +V
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
Q S+ K G + ++ +YC+ G++ + +RMP TV I
Sbjct: 138 KQAH-SVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMI----- 191
Query: 658 KNGYAT 663
+GYA+
Sbjct: 192 -SGYAS 196
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 325/651 (49%), Gaps = 52/651 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY-----TQNGFPGRTLELFL 132
FL N + Y KCG+L A +FD PERD +WNA+LGAY + +G L LF
Sbjct: 120 FLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAILGAYASSVDSNDGNAQEGLHLFR 179
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ S S ++T A VL+ + L +K +HG +K G +V + +L++ Y KC
Sbjct: 180 LLRESLGSTTRMTLAPVLKLCSNSXCLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCG 239
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA---N 249
M DAR +FD ++ ++ V WN++++ Y+ G KEA +F + R + P F+ N
Sbjct: 240 RMXDARLLFDGMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILN 299
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDD--------------------------VVLG 283
+F + + Q+ K+ D+ V +
Sbjct: 300 GVFEVNXDEGKWHADQVQAYXXKLSLSDDNXDVFCWNKKLSEYLWAGDNWGAIECFVNMN 359
Query: 284 SLTEMYVKCGRLED----ARGL----------LDQPDERNIISWTSIVSGYAISGRIREA 329
L Y LE A GL L + + T+++ Y+ SG++ EA
Sbjct: 360 GLNVXYDXVTLLEVLAAVADGLNISRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEA 419
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
LF + ++ WNAM+ GY S +AL L+ ++ + DQ+TL C L
Sbjct: 420 ELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCL 479
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ GK++H + + + S+++V++ +LDMY KCG++ +A I F +S D V+W ++
Sbjct: 480 VLLDZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAP-DDVAWTSM 538
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NC 507
++G G ++A+ + +M Q P ++TF TL+ A + +++LEQG+Q+H VI+ +C
Sbjct: 539 ISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDC 598
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
V +LV++Y KC +E R+FK+ + ++++ N+M++G + EA+ +F
Sbjct: 599 VSDPFVGT-SLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFK 657
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK GI+PD ++F GIL AC G A ++F SM GI P++EHY C++
Sbjct: 658 SMKSHGIEPDRVSFIGILSACSLAGLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXA 717
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
G ++E + + MPF + M R + CR G +G+ A RL L P+
Sbjct: 718 GLVQEXDKVIETMPFKASASMNRALLGACRIQGDVEIGKRVAARLFALEPF 768
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 223/497 (44%), Gaps = 66/497 (13%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++LR++ L + K H IV G G+ L ++L+ Y KC ++ A ++FD +
Sbjct: 89 SLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPER 148
Query: 208 NAVSWNVIVRRYLVA-----GNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPY 261
+ V+WN I+ Y + GN +E + +F ++LRE + T A L CS +
Sbjct: 149 DLVTWNAILGAYASSVDSNDGNAQEGLHLF-RLLRESLGSTTRMTLAPVLKLCSNSXCLW 207
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+HG IKI D V G+L +Y KCGR+ DAR L D ER+++ W ++ GY
Sbjct: 208 AAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYV 267
Query: 322 ISGRIREARELFNEM------PER------------------------------------ 339
G +EA +LF+E P+
Sbjct: 268 QLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSD 327
Query: 340 ---NVISWNAMLAGYTRSLLWK----EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE- 391
+V WN L+ Y LW A++ M D VTL L V A +++
Sbjct: 328 DNXDVFCWNKKLSEY----LWAGDNWGAIECFVNMNGLNVXYDXVTL---LEVLAAVADG 380
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ + +++H + ++ FV+ AL+D+Y + G + A + F Q D WNA++
Sbjct: 381 LNISRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLF-QNKDDLDLACWNAMMF 439
Query: 452 GYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
GY +A+ FS + S + T T AC + L+ZGKQIH VI+ +
Sbjct: 440 GYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIKAGFXS 499
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ ++++Y KC + A VF S+ D + SMI G N +AL ++ M+
Sbjct: 500 DLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMR 559
Query: 571 KEGIKPDHITFHGILLA 587
+ G+ PD TF ++ A
Sbjct: 560 QSGVMPDEYTFATLIKA 576
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 166/332 (50%), Gaps = 4/332 (1%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V Y L L A + + +R++ + + F+ I+ Y + G +++A L
Sbjct: 363 VXYDXVTLLEVLAAVADGLNISRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELL 422
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F + D WNAM+ Y + + L LF +N SG ++QIT A ++ + L
Sbjct: 423 FQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLL 482
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
KQ+H ++K GF ++ + S ++D Y KC M +A +F+ I + V+W ++
Sbjct: 483 DZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGC 542
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ GN +A+ ++ +M + + P +TFA + A S++++ +G Q+H +IK+D D
Sbjct: 543 VDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDP 602
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V SL +MY KCG +ED L + + RNI+ W +++ G A G EA LF M
Sbjct: 603 FVGTSLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSH 662
Query: 340 NV----ISWNAMLAGYTRSLLWKEALDFVFLM 367
+ +S+ +L+ + + L EA ++ M
Sbjct: 663 GIEPDRVSFIGILSACSLAGLTSEAYEYFHSM 694
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 131/294 (44%), Gaps = 30/294 (10%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
Z +++ ++++ +++ + ++ Y KCG++ +A +F+ + D +W +M+
Sbjct: 484 ZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV 543
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
NG + L ++ M SGV ++ T+A ++++S+ L +QLH ++K +
Sbjct: 544 DNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPF 603
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ +SLVD Y KC + D R+F + +N V WN ++ GN +EAV +F M
Sbjct: 604 VGTSLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHG 663
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
I P +F L ACS + G +E Y + +
Sbjct: 664 IEPDRVSFIGILSACS-------------------------LAGLTSEAYEYFHSMPNDC 698
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
G+ E I ++ +V +G ++E ++ MP + S N L G R
Sbjct: 699 GI-----EPEIEHYSCLVDALGXAGLVQEXDKVIETMPFKASASMNRALLGACR 747
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 304/596 (51%), Gaps = 35/596 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKC +LDDA F MPER+ SW A + QN R LELF++M G+ +Q
Sbjct: 233 VDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQ 292
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+YA+ RS A L +QLH +K F + ++ +++VD Y K +TDARR F
Sbjct: 293 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 352
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N + N ++ + AG G EA+ +F M+R IR + + AC+ ++G
Sbjct: 353 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 412
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+H + IK F+ D V ++ ++Y KC L
Sbjct: 413 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL---------------------------- 444
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQVTLGLI 382
EA +F M +++ +SWNA++A ++ + + L F ++R K D T G +
Sbjct: 445 ---MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKP-DDFTYGSV 500
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L CA L ++ G VH + ++ S+ FV++ ++DMY KCG + A+ ++ ++
Sbjct: 501 LKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ- 559
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
VSWNA+L+G++ +SEEA FSEM +P FTF T+L CAN++++E GKQIH
Sbjct: 560 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 619
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+I+ + LV++Y KC + ++ VF++ D + N+MI G+ + G E
Sbjct: 620 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 679
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F M+KE + P+H TF +L AC H G ++F M Y + PQLEH+ CM+
Sbjct: 680 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 739
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R +E F+N MPF + + + C+ + E AA + L+P
Sbjct: 740 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDP 795
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 259/523 (49%), Gaps = 37/523 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y G++ A LFD MP+ D SWNA++ Y Q G +++LF++M GVS
Sbjct: 129 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 188
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
++ T+A +L+S + EEL LGV Q+H L VK G +V S+LVD YGKC + DA
Sbjct: 189 PDRTTFAVLLKSCSALEELSLGV--QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 246
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F + +N VSW + + + +F +M R + ++A+A +C+ +S
Sbjct: 247 CFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 306
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+H IK F D VV ++ ++Y K L DAR
Sbjct: 307 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR------------------- 347
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
R F +P V + NAM+ G R+ L EA+ M +++ D V+
Sbjct: 348 -----------RAFFG-LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 395
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L + + CA G++VH ++ + +I V+NA+LD+Y KC L A + F M
Sbjct: 396 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK 455
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
Q +D VSWNA++ + G ++ + F+EM ++ +P FT+ ++L ACA + SLE G
Sbjct: 456 Q-KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 514
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+H VI++ + +V++Y KC ++ A ++ V+ N+++ GF N+
Sbjct: 515 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 574
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
EA + F M G+KPDH TF +L C + ++L Q
Sbjct: 575 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 617
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 237/458 (51%), Gaps = 33/458 (7%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
VS YA F+ CA+ + R+L ++ + + + ++ Y K +L DAR
Sbjct: 290 VSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRA 349
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F +P + NAM+ + G + LF M S + + ++ + V + AE
Sbjct: 350 FFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGY 409
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+Q+H L +K GF ++ + ++++D YGKC + +A +F ++ K++VSWN I+
Sbjct: 410 FQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL 469
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G+ + ++ F +MLR ++P +FT+ + L AC+ L S G+ +H +IK D
Sbjct: 470 EQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDA 529
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V ++ +MY KCG +++A+ L D+ + ++SW +I+SG++++ EA++ F+EM +
Sbjct: 530 FVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDM 589
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ D T +L+ CA L+ I++GK++H
Sbjct: 590 GL-------------------------------KPDHFTFATVLDTCANLATIELGKQIH 618
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G I + + + ++S+ L+DMY KCG++ + + F ++ ++RD VSWNA++ GYA G
Sbjct: 619 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV-EKRDFVSWNAMICGYALHGLG 677
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
EA+ F MQ E P+ TF +L AC+++ + G
Sbjct: 678 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 715
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 232/537 (43%), Gaps = 69/537 (12%)
Query: 139 VSANQITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
V+ ++T++ V +S A+ E ++V GF + + L+ Y +C
Sbjct: 53 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVS-GFVPTAFVSNCLLQMYARCAGAA 111
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGN------------------------------- 224
ARR+FD + ++ VSWN ++ Y AG+
Sbjct: 112 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGM 171
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E+V +F +M R + P TFA L +CS L G+Q+H + +K E D +
Sbjct: 172 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 231
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC L+DA ERN +SW + ++G + + ELF E
Sbjct: 232 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE--------- 282
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M++ + Q + CA +S + G+++H +
Sbjct: 283 ----------------------MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 320
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N +SS+ V A++D+Y K +L AR F+ + + S NA++ G R G EAM
Sbjct: 321 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGLVRAGLGIEAMG 379
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M + R + + +ACA QG+Q+HC I++ +++++ A++++Y
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 439
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC L A +F+ D + N++I N + + F M + G+KPD T+
Sbjct: 440 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 499
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L AC +++ L D + K G+ ++ +YC+ G + E + +R+
Sbjct: 500 VLKACAALRSLEYGLMVHDKV-IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 555
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ V ++ Y+ + A+ +F DV+ N+++ G+C +E++++F M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ G+ PD TF +L +C + L +Q ++ K G+ + ++ + YG
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVH-ALAVKTGLEIDVRTGSALVDM---YGKC 239
Query: 631 KELED---FVNRMP 641
+ L+D F MP
Sbjct: 240 RSLDDALCFFYGMP 253
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/651 (29%), Positives = 324/651 (49%), Gaps = 50/651 (7%)
Query: 52 CASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
CA +I EA+ + ++ F + L N A Y KC A G+FDEMP+R+
Sbjct: 128 CAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVF 187
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELGVSKQLHG 167
SW M+ T++G + F +M +SG+ ++ Y+ +++S + LELG K +H
Sbjct: 188 SWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG--KMVHA 245
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
IV RGF ++ + +SL++ Y K + D+ +F+ + N VSWN ++ G E
Sbjct: 246 QIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLE 305
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A +F +M P +T + A L G ++ ++ EG+ +V +L +
Sbjct: 306 AFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALID 365
Query: 288 MYVKCGRLEDARGLLDQPDERNIIS------WTSIVSGYAISGRIREARELFNEMPERNV 341
MY KCG L DAR + D N I+ W +++SGY+ SG +EA EL+ +M + +
Sbjct: 366 MYSKCGSLHDARSVFDT----NFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
S D T + N A ++ G+ VHG
Sbjct: 422 TS-------------------------------DLYTYCSVFNAIAASKSLQFGRVVHGM 450
Query: 402 IHRNDYSSNIF-VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + + V+NA+ D Y KCG L R F +M + RD VSW ++T Y++ E
Sbjct: 451 VLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYSQSSLGE 509
Query: 461 EAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ +F M+ E P++FTF ++L +CA++ LE G+Q+H + + + AL+
Sbjct: 510 EALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALI 569
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC + A +VF + S+ D++ ++I G+ + +AL++F M+ GIK + +
Sbjct: 570 DMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAV 629
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
T +L AC H G V+ L +F M YG++P++EHY C+I L R G + + +F+ +
Sbjct: 630 TLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRK 689
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + + + CR +G LGE AAR++ + P + + +N +
Sbjct: 690 MPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTY 740
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 228/456 (50%), Gaps = 36/456 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ + Q C ++ + + + +V +F+ + Y K G+++D+ +F+ M
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E + SWNAM+ T NG +LF+ M + + N T +V ++ + +++ + K+
Sbjct: 284 EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKE 343
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLVA 222
+ + G GNV++ ++L+D Y KC + DAR +FD I WN ++ Y +
Sbjct: 344 VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQS 403
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV-V 281
G +EA+ ++ +M + I +T+ + A + S G +HG+++K + V V
Sbjct: 404 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 463
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++ + Y KCG LED R + D+ +ER+I+SWT++V+
Sbjct: 464 NNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVT----------------------- 500
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
Y++S L +EAL LMR+ +Q T +L CA L ++ G++VHG
Sbjct: 501 --------AYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGL 552
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + + + +AL+DMY KCG++ A F ++S D VSW A+++GYA+ G E+
Sbjct: 553 LCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN-PDIVSWTAIISGYAQHGLVED 611
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
A+ F M+ + + T +L AC++ +E+G
Sbjct: 612 ALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEG 647
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 230/523 (43%), Gaps = 43/523 (8%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGN--VILESSLVDAYGKCMVMTDARRMFDDIQ 205
+VLR AE+ + +K +HGL++K F ++L + Y KC A +FD++
Sbjct: 123 DVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMP 182
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N SW V++ G + F +ML I P F ++ + +C L S G
Sbjct: 183 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 242
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H I+ F V SL MY K G +ED+ + + E N +SW +++SG +G
Sbjct: 243 VHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG- 301
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
L EA D M+ + TL +
Sbjct: 302 ------------------------------LHLEAFDLFVRMKNGACTPNMYTLVSVSKA 331
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF-YQMSQRRDKV 444
L ++ MGKEV N+ V AL+DMY KCG+L AR F
Sbjct: 332 VGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNT 391
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
WNA+++GY++ G S+EA+ + +M Q +T+ ++ A A SL+ G+ +H V
Sbjct: 392 PWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMV 451
Query: 504 IRNCYEINVV-CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++ ++ VV A+ + Y+KC LE +VF D++ +++ + + G EA
Sbjct: 452 LKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEA 511
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L F LM++EG P+ TF +L++C ++ Q + CK G+ + +I
Sbjct: 512 LATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQ-VHGLLCKAGLDTEKCIESALID 570
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+Y + G + E +++ NP + I +GYA G
Sbjct: 571 MYAKCGSITEAGKVFDKIS-NPDIVSWTAII-----SGYAQHG 607
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 153/307 (49%), Gaps = 19/307 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI-ECYGKCGNLDDARGLFDEM 103
Y +F A+SK++ R + ++ V +N AI + Y KCG L+D R +FD M
Sbjct: 428 YCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM 487
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ERD SW ++ AY+Q+ L F M G + NQ T+++VL S A L +
Sbjct: 488 EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGR 547
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HGL+ K G +ES+L+D Y KC +T+A ++FD I N + VSW I+ Y G
Sbjct: 548 QVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHG 607
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFE 276
++A+ +F +M I+ T LFACS EG+ +GV+ +++
Sbjct: 608 LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEH- 666
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR----EARE 331
+ ++ + GRL+DA + + P E N + W +++ G + G + AR+
Sbjct: 667 -----YACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARK 721
Query: 332 LFNEMPE 338
+ + PE
Sbjct: 722 ILSIRPE 728
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 334/684 (48%), Gaps = 85/684 (12%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLNRAIECYGK 89
S L++ E Y L Q C+S R+ L+ + + V + N ++ Y +
Sbjct: 15 SSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSR 74
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
G + AR LFDEMP+R+ SWN M+ Y +G G +L F DM
Sbjct: 75 SGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF-DM--------------- 118
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ + G+ NV+ V + K ++ ARR+F+ + K+
Sbjct: 119 ------------------MPERDGYSWNVV-----VSGFAKAGELSVARRLFNAMPEKDV 155
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-----TFANALFACSFLSSPYEGM 264
V+ N ++ Y++ G +EA+ +F + LNF T L AC+ L + G
Sbjct: 156 VTLNSLLHGYILNGYAEEALRLF--------KELNFSADAITLTTVLKACAELEALKCGK 207
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QIH I+ E D + SL +Y KCG L A +L+Q E + S ++++SGYA G
Sbjct: 208 QIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCG 267
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R+ E+R LF+ R VI WN+M++GY + + EAL MR T++ D TL ++N
Sbjct: 268 RVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVIN 326
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-------------- 430
C GL ++ GK++H + +I V++ LLDMY KCG+ A
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 431 -----RIWF-----------YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR 474
+++F ++ + + +SWN++ G+++ G + E + F +M
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 475 PS-KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P+ + + ++++ACA+ISSLE G+Q+ + + V +L+++Y KC +E+ R
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF D + NSMI G+ N +G EA+++F M GI+P ITF +L AC + G
Sbjct: 507 VFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGL 566
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V+ + F+SM+ +G +P EH+ CM+ L R GY++E + V MPF+ M I
Sbjct: 567 VEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSIL 626
Query: 654 DKCRKNGYATLGEWAARRLNELNP 677
C NGY +G+ AA ++ EL P
Sbjct: 627 RGCVANGYKAMGKKAAEKIIELEP 650
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 14/339 (4%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+ V S ++ C S +EA KL S + ++ LLN I+ Y CG +DDA
Sbjct: 351 DDIVVASTLLDMYSKCGSP---MEACKLFSEVESY----DTILLNSMIKVYFSCGRIDDA 403
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+ +F+ + + SWN+M ++QNG TLE F M+ + ++++ ++V+ + A
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L + +Q+ G + ++ SSL+D Y KC + RR+FD + + V WN ++
Sbjct: 464 SSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMI 523
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-- 274
Y G G EA+ +F KM IRP TF L AC++ EG ++ +K+D
Sbjct: 524 SGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFES-MKVDHG 582
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REAR 330
F D + ++ + G +E+A L+++ P + + W+SI+ G +G ++A
Sbjct: 583 FVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAA 642
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
E E+ N +++ + A + S W+ + LMR+
Sbjct: 643 EKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 280/500 (56%), Gaps = 4/500 (0%)
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
++ A +F+ IQ N + WN + R + + + A+ ++ M+ + P +++F L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ + EG QIHG ++K+ ++ D V SL MY + GRLEDA + D+ R+++S+
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T++++GYA G I AR+LF+E+ ++V+SWNAM++GY + +KEAL+ M KT
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+ T+ +++ CA I++G+++H +I + + SNI + N L+D+Y KCG + +A
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA-CG 253
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
+Q ++D +SWN ++ G+ +EA+ F EM + P+ T ++L ACA++ +
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 493 LEQGKQIHCFVIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++ G+ IH ++ + + +L+++Y KC +E A +VF + + N+MI
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
GF + + A ++F M+K GI PD ITF G+L AC H G + L F SM Y I
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKI 433
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P+LEHY CMI L G KE ++ + MP P + + C+ + LGE A+
Sbjct: 434 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQ 493
Query: 671 RLNELNPWAPFQFKITTNRF 690
L ++ P P + + +N +
Sbjct: 494 NLIKIEPENPGSYVLLSNIY 513
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 206/443 (46%), Gaps = 70/443 (15%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L A +F+ + E + WN M + N L+L++ M G+ N ++ +L+S
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD---------------- 196
A+ L +Q+HG ++K G+ ++ + +SL+ Y + + D
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 197 ---------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
AR++FD+I K+ VSWN ++ Y+ N KEA+ ++ M++ +++
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P T + AC+ S G Q+H I F + ++ L ++Y KCG +E A GL
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
++++ISW +++ G+ +EA LF E
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQE-------------------------- 288
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN----DYSSNIFVSNAL 417
M ++ + + VT+ +L CA L I +G+ +H +I++ +S++ S L
Sbjct: 289 -----MLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS--L 341
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+DMY KCG++ +A+ F M R SWNA++ G+A G++ A FS+M+ P
Sbjct: 342 IDMYAKCGDIEAAKQVFDSM-LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPD 400
Query: 477 KFTFETLLAACANISSLEQGKQI 499
TF LL+AC++ L+ G+ I
Sbjct: 401 DITFVGLLSACSHSGMLDLGRHI 423
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 200/448 (44%), Gaps = 70/448 (15%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA-- 96
P SYS + L + CA SKA++E +++ +++ +++ I Y + G L+DA
Sbjct: 63 PNSYS-FPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHK 121
Query: 97 -----------------------------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
R LFDE+ +D SWNAM+ Y +
Sbjct: 122 VFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEA 181
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LEL+ DM + V ++ T V+ + A+ + + +QLH I GF N+ + + L+D
Sbjct: 182 LELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDL 241
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F + K+ +SWN ++ + KEA+++F +MLR P + T
Sbjct: 242 YSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTM 301
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G +L SL +MY KCG +E A+ + D
Sbjct: 302 LSVLPACAHLGAIDIGRWIH-VYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
R++ SW +++ G+A+ G+ A +LF++
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSK----------------------------- 391
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYR 422
MRK D D +T +L+ C+ + +G+ + + + DY + + ++D+
Sbjct: 392 --MRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ-DYKITPKLEHYGCMIDLLG 448
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVL 450
CG + A+ M D V W ++L
Sbjct: 449 HCGLFKEAKEMIRTMPMEPDGVIWCSLL 476
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/601 (29%), Positives = 304/601 (50%), Gaps = 35/601 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ N I+ Y + +LD+AR +F+EM RD SWN+++ Y NGF L+++
Sbjct: 156 LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRM 215
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+G+ + T ++VL + + + +HG+I K G G+VI+ + L+ Y K + +
Sbjct: 216 TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLRE 275
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+F + K++V+WN ++ Y G + +V +F M+ + P + + + AC
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQ 334
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G +H +I FE D V L +MY KCG L
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDL--------------------- 373
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A+E+F+ ++ ++WN+++ GYT+S +KE L+ F M K + D
Sbjct: 374 ----------LAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-SFKMMKMERKPDS 422
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT L+L++ + L++I G+ +H + + + + + + N+LLD+Y KCG + F
Sbjct: 423 VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSY 482
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
MS D +SWN V+ +EM+ E P + T +L C+ ++ Q
Sbjct: 483 MSAH-DIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQ 541
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IH ++ ++ +E NV AL+E+Y+KC LE I+VFK DV+ ++I F
Sbjct: 542 GKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGM 601
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
G++AL+ F M+ G+ PD + F + AC H G VK L+FFD M+ Y + P++E
Sbjct: 602 YGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRME 661
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R G + + E+F+ MP P + + CR G + + ++++ EL
Sbjct: 662 HYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILEL 721
Query: 676 N 676
N
Sbjct: 722 N 722
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 280/552 (50%), Gaps = 34/552 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP L + L + +S+K + R + S ++T + V + I Y + + +
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSV 74
Query: 98 GLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F + P + WN+++ A T NG + L + +M + + T+ +V+ S A
Sbjct: 75 SVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARI 134
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L+L + +H ++ GF ++ + ++L+D Y + + + +AR +F+++ N+++VSWN ++
Sbjct: 135 LDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLI 194
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G ++A+ M+ K + P FT ++ L AC L + EG+ +HGVI KI
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIA 254
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
GD ++ L MY K RL +AR + + ++ ++W +++ GYA GR + +LF +
Sbjct: 255 GDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMD- 313
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
M+ G+ D +++ + C ++++GK
Sbjct: 314 ----------MIDGFVP---------------------DMLSITSTIRACGQSGDLQVGK 342
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
VH ++ + + + N L+DMY KCG+L +A+ F ++ +D V+WN+++ GY +
Sbjct: 343 FVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVF-DTTKCKDSVTWNSLINGYTQS 401
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
G +E + SF M+ E +P TF LL+ + ++ + QG+ IHC VI+ +E ++
Sbjct: 402 GYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGN 461
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+L++VY KC ++ ++VF S+ D+I N++I H + ++ M+ EG+ P
Sbjct: 462 SLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMP 521
Query: 577 DHITFHGILLAC 588
D T GIL C
Sbjct: 522 DEATVLGILPMC 533
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 224/480 (46%), Gaps = 51/480 (10%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNVIVRRYLV 221
+ +H LI+ G +VI L+ Y + + +F I N V WN I+R
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +A+ + +M + ++P FTF + + +C+ + G +H +++ FE D +
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY + L++AR +F EM R+
Sbjct: 159 GNALIDMYSRFVDLDNAR-------------------------------YVFEEMSNRDS 187
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN++++GY + W++ALD R T D T+ +L C L +K G VHG
Sbjct: 188 VSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGV 247
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I + + ++ + N LL MY K LR AR F +M+ +D V+WN ++ GYA+ G+ E
Sbjct: 248 IEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAV-KDSVTWNTMICGYAQLGRHEA 306
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
++ F +M P + + + AC L+ GK +H ++I + +E + V L+++
Sbjct: 307 SVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDM 366
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC L A VF + D + NS+I G+ + +E LE F +MK E KPD +TF
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTF 425
Query: 582 HGIL-----LACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKEL 633
+L LA I++G + C K+G +L ++ +Y + G M +L
Sbjct: 426 VLLLSIFSQLADINQGR---------GIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDL 476
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 11/297 (3%)
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ VH I + S ++ S L+ Y + + S+ F +S + WN+++
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G +A+ ++EM + + +P FTF +++ +CA I LE G +H + +E ++
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL+++Y++ L+ A VF+E S+ D + NS+I G+C N +AL+++ + G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PD T +LLAC VK + + K GI + ++ +Y ++ ++E
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIE-KIGIAGDVIIGNGLLSMYFKFERLREAR 277
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR---LNELNPWAPFQFKITTN 688
++M +V I C GYA LG A ++ ++ + P IT+
Sbjct: 278 RVFSKMAVKDSVTWNTMI---C---GYAQLGRHEASVKLFMDMIDGFVPDMLSITST 328
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 138/306 (45%), Gaps = 7/306 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+ V++ L +F A I + R + +++ F + + N ++ Y KCG +DD
Sbjct: 421 DSVTFVLLLSIFSQLAD---INQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F M D SWN ++ + ++ +M G+ ++ T +L +
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
K++HG I K GF NV + ++L++ Y KC + + ++F ++ K+ V+W ++
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ + G GK+A+ F M + P + F +FACS EG++ +K D+
Sbjct: 598 AFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDR-MKTDYNL 656
Query: 278 DDVV--LGSLTEMYVKCGRLEDARG-LLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ + + ++ + G L A +L P + + W +++S G A+ +
Sbjct: 657 EPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSK 716
Query: 335 EMPERN 340
++ E N
Sbjct: 717 KILELN 722
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 311/629 (49%), Gaps = 42/629 (6%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ +AR+L + P N I Y K GNL +AR LFD M ER +W ++G
Sbjct: 68 LSQARQLFEKM----PHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGG 123
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS-KQLHGLIVKRGFCG 176
Y+Q ELF+ M G + +T+ +L S E+G Q+ I+K G+
Sbjct: 124 YSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL-SGCNGHEMGNQITQVQTQIIKLGYDS 182
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+I+ ++LVD+Y K + A ++F ++ ++VS+N ++ Y G ++AV +F +M
Sbjct: 183 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQ 242
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
++P FTFA L A L G QIH +IK +F + V +L + Y K +
Sbjct: 243 NSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 302
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
DAR +LF+EMPE++ +S+N +++GY
Sbjct: 303 DAR-------------------------------KLFDEMPEQDGVSYNVIISGYAWDGK 331
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
K A D ++ T D Q +L++ + + +MG+++H S I V N+
Sbjct: 332 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 391
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
L+DMY KCG A + F ++ R V W A+++ Y ++G EE + F++M Q
Sbjct: 392 LVDMYAKCGKFEEAEMIFTNLTHR-SAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA 450
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
+ TF +LL A A+I+SL GKQ+H F+I++ + NV AL++VY KC ++ A++ F
Sbjct: 451 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 510
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+E +++ N+MI + N L+ F M G++PD ++F G+L AC H G V+
Sbjct: 511 QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVE 570
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
L F+SM Y + P+ EHY ++ + CR G E E + MP +P M + +
Sbjct: 571 EGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 630
Query: 656 CRKNGYATLGEWAARRL---NELNPWAPF 681
CR + L AA +L EL AP+
Sbjct: 631 CRIHKNQELARRAADQLFNMEELRDAAPY 659
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 277/568 (48%), Gaps = 67/568 (11%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP Y + L C + + ++++ ++ + + N ++ Y K LD A
Sbjct: 146 EP-DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 204
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LF EMPE D S+NAM+ Y+++G + + LF++M +SG+ + T+A VL ++
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLD 264
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++ + +Q+H ++K F NV + ++L+D Y K + DAR++FD++ ++ VS+NVI+
Sbjct: 265 DIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIIS 324
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G K A +F ++ F FA L S G QIH I +
Sbjct: 325 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 384
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ +V SL +MY KCG+ E+A + R+ + WT+++S Y G E +LFN+M
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ +VI+ DQ T +L A ++ + +GK+
Sbjct: 445 QASVIA-------------------------------DQATFASLLRASASIASLSLGKQ 473
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H FI ++ + SN+F +ALLD+Y KCG+++ A F +M R+ VSWNA+++ YA+ G
Sbjct: 474 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD-RNIVSWNAMISAYAQNG 532
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
++E + SF EM +P +F +L+AC++ +E+G + N
Sbjct: 533 EAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG----------LWHFN----- 577
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
++ ++Y + R +S +D++ C + R EA + LM + I P
Sbjct: 578 SMTQIY------KLDPRREHYASVVDML---------CRSGRFNEAEK---LMAEMPIDP 619
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSM 604
D I + +L AC N +LA + D +
Sbjct: 620 DEIMWSSVLNACRIHKNQELARRAADQL 647
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/568 (25%), Positives = 248/568 (43%), Gaps = 71/568 (12%)
Query: 147 ANVLRSSA---EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ L+SS+ +L L V + IVK GF + + V + K ++ AR++F+
Sbjct: 18 STFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEK 77
Query: 204 IQNKNAVSWNVIVRRYLVAGN-------------------------------GKEAVVMF 232
+ +KN VS N+++ Y+ +GN KEA +F
Sbjct: 78 MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELF 137
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M R P TF L C+ + Q+ IIK+ ++ +V +L + Y K
Sbjct: 138 VQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKS 197
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
RL+ A L + E + +S+ ++++GY+ G +A LF EM +
Sbjct: 198 NRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGL----------- 246
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
K T + T +L GL +I +G+++H F+ + ++ N+F
Sbjct: 247 ----------------KPT----EFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVF 286
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
VSNALLD Y K ++ AR F +M + +D VS+N +++GYA G+ + A F E+Q+
Sbjct: 287 VSNALLDFYSKHDSVIDARKLFDEMPE-QDGVSYNVIISGYAWDGKHKYAFDLFRELQFT 345
Query: 473 TRPSK-FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
K F F T+L+ +N E G+QIH I + ++ +LV++Y KC E A
Sbjct: 346 AFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEA 405
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+F + + +MI + E L++F M++ + D TF +L A
Sbjct: 406 EMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASI 465
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
++ L Q S K G + + ++ +Y + G +K+ MP + +
Sbjct: 466 ASLSLGKQ-LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNA 523
Query: 652 IFDKCRKNG--YATLGEWAARRLNELNP 677
+ +NG ATL + L+ L P
Sbjct: 524 MISAYAQNGEAEATLKSFKEMVLSGLQP 551
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 191/645 (29%), Positives = 322/645 (49%), Gaps = 46/645 (7%)
Query: 41 SYSLYAHLFQLCASSK-----AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
++ Y L Q C+ + I+ R +ES+ P L N I YG+CG L+D
Sbjct: 160 NFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETP-----LCNALITMYGRCGRLED 214
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR +F M ERD +WNA++ Y Q+G + L+ M G +++T+ +L S
Sbjct: 215 ARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNG 274
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L K +H IV+ G N+ L ++LV Y KC + D R +F+ + +N +SWNV+
Sbjct: 275 PEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVM 334
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V Y G G++AV + M + ++P N T L C+ + G ++HG I +
Sbjct: 335 VTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRC 394
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D ++ SL MY +CG +E A + D +RN+ISWT++++ Y+ R A LF+
Sbjct: 395 EADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHA 454
Query: 336 MPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ L+G + + + EALD C G +
Sbjct: 455 IH----------LSGVKPTCITFLEALD----------------------ACVGAEALDK 482
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G+ VH ++ ++ + +AL+ MY +CG++R A+ F R++ V+W+A++ +
Sbjct: 483 GRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFV 542
Query: 455 RRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN-V 512
+ GQ E + MQ + S TF + L+AC+N++ L +GK+IH +V ++
Sbjct: 543 QHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAA 602
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+LV +Y KC L+ A VF+ S D I N++I G+ + + R+A+E+F M++E
Sbjct: 603 TVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQE 662
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G+ PD +TF IL C H G + + + SM + G+ P ++Y C+I L R G ++E
Sbjct: 663 GVAPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELGLEPTQDNYACVIDLLGRAGKLQE 721
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
E+F+ + P + L + C+ +G G AA + E++P
Sbjct: 722 AEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDP 766
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 235/543 (43%), Gaps = 69/543 (12%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L Q C KA+ AR+L S +V VFL N I YGKC +LDDA F+ M ++
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W A++G Q+ + L M GV + IT L
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAAL----------------- 103
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
YG C + DA+R+FD + +N ++W ++ + V + ++
Sbjct: 104 ------------------TMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVT-SLEQ 144
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A +F M E + T+ + ACS G+ +H ++ + + +L
Sbjct: 145 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 204
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY +CGRLEDAR + ER+II+W ++++ Y G + EA L+
Sbjct: 205 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQ------------- 251
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
LM + D+VT +L + G + K VH I +
Sbjct: 252 ------------------LMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGV 293
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S NI + AL+ MY KC +L R W ++ +R+ +SWN ++T YA+ G +A+
Sbjct: 294 SINIALGTALVAMYSKCESLEDTR-WLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITE 352
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
MQ + +P T LL C + L+ G+++H ++ E +++ +L+ +Y +C
Sbjct: 353 YMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCG 412
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
+E A VF +VI +M+ + R AL +F + G+KP ITF L
Sbjct: 413 EVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALD 472
Query: 587 ACI 589
AC+
Sbjct: 473 ACV 475
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LL AC + +L+ +++H ++R + V L+ Y KC L+ A F+ S +
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 543 VIICNSMILGFCHNERGRE-ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
V + I+G C A+ + M EG+KPD+IT L G+V A + F
Sbjct: 61 VYTWTA-IIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVF 119
Query: 602 DSM 604
D+M
Sbjct: 120 DAM 122
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 306/599 (51%), Gaps = 35/599 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ + + + G++D+A +F+ + ++ + ML + + + L+ F+ M V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ +L+ +E EL V K++HGL+VK GF ++ + L + Y KC + +AR++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ VSWN IV Y G + A+ M M E+++P T + L A S L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +IHG ++ F+ + +L +MY KCG L
Sbjct: 253 RIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSL------------------------- 287
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTL 379
+ AR LF+ M ERNV+SWN+M+ Y ++ KEA+ F ++ + K D +
Sbjct: 288 ------KTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVM 341
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
G L+ CA L +++ G+ +H + N+ V N+L+ MY KC + +A F ++ Q
Sbjct: 342 G-ALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKL-Q 399
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R VSWNA++ G+A+ G+ EA+ FS+MQ T +P FT+ +++ A A +S K
Sbjct: 400 SRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH V+RNC + NV ALV++Y KC + A +F S V N+MI G+ +
Sbjct: 460 IHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGI 519
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+ ALE+F M+K I+P+ +TF ++ AC H G V+ L+ F M+ Y I P ++HY
Sbjct: 520 GKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYG 579
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M+ L R G + E DF+ +MP P V + + C+ + E A RL ELNP
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNP 638
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EPV Y+ + +L ++C + +++ LV + +F + Y KC + +AR
Sbjct: 132 EPVVYN-FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEAR 190
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FD MPERD SWN ++ Y+QNG LE+ M + + IT +VL + +
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALR 250
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ + K++HG ++ GF V + ++LVD Y KC + AR +FD + +N VSWN ++
Sbjct: 251 LIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMID 310
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ N KEA+V+F KML E ++P + + AL AC+ L G IH + ++++ +
Sbjct: 311 AYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDR 370
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V+ SL MY KC ++ A + + R I+SW +++ G+A +GR EA F++M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQ 430
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R V D T ++ A LS K
Sbjct: 431 ARTV-------------------------------KPDTFTYVSVITAIAELSITHHAKW 459
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + RN N+FV+ AL+DMY KCG + AR+ F MS+R +WNA++ GY G
Sbjct: 460 IHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTHG 518
Query: 458 QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF 502
+ A+ F EMQ T RP+ TF ++++AC++ +E G + CF
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAG--LKCF 562
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 217/421 (51%), Gaps = 33/421 (7%)
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
LI K G + ++ LV + + + +A R+F+ I K V + +++ + + +
Sbjct: 59 LIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDK 118
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ F +M +++ P+ + F L C + G +IHG+++K F D + L
Sbjct: 119 ALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KC ++ +AR + D+ ER+++SW +IV+GY+ +G R A E+ N M E N+
Sbjct: 179 MYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENL------ 232
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
K + +T+ +L + L I++GKE+HG+ R +
Sbjct: 233 ----------KPSF---------------ITIVSVLPAVSALRLIRIGKEIHGYAMRAGF 267
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S + ++ AL+DMY KCG+L++AR+ F M + R+ VSWN+++ Y + +EAM F
Sbjct: 268 DSLVNIATALVDMYAKCGSLKTARLLFDGMLE-RNVVSWNSMIDAYVQNENPKEAMVIFQ 326
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+M E +P+ + L ACA++ LE+G+ IH + + NV +L+ +Y KC
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCK 386
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
++ A +F + S ++ N+MILGF N R EAL F M+ +KPD T+ ++
Sbjct: 387 EVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVIT 446
Query: 587 A 587
A
Sbjct: 447 A 447
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 196/431 (45%), Gaps = 46/431 (10%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG+L AR LFD M ER+ SWN+M+ AY QN P + +F M GV
Sbjct: 278 VDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTD 337
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
++ L + A+ +L + +H L V+ NV + +SL+ Y KC + A MF
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+Q++ VSWN ++ + G EA+ F +M ++P FT+ + + A + LS +
Sbjct: 398 LQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA 457
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IHGV++ R LD +N+ T++V YA
Sbjct: 458 KWIHGVVM---------------------------RNCLD----KNVFVTTALVDMYAKC 486
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G I AR +F+ M ER+V +WNAM+ GY + K AL+ M+K T + VT ++
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVI 546
Query: 384 NVC-------AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ C AGL M KE + D+ A++D+ + G L A + Q
Sbjct: 547 SACSHSGLVEAGLKCFHMMKENYSIEPSMDHYG------AMVDLLGRAGRLNEAWDFIMQ 600
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSL-EQ 495
M + + A+L G + ++ +E +E P + LLA +S+ E+
Sbjct: 601 MPVKPAVNVYGAML-GACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEK 659
Query: 496 GKQIHCFVIRN 506
Q+ ++R
Sbjct: 660 VGQVRVSMLRQ 670
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 308/602 (51%), Gaps = 35/602 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F + + + + G++D+A +F+ + + ++ ML + + + L+ F+ M +
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
V + +L+ +E EL V K++HGL+VK GF ++ + L + Y KC + +A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD + ++ VSWN IV Y G + A+ M M E+++P T + L A S L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +IHG ++ F+ + +L +MY KCG LE
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE--------------------- 288
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQ 376
AR+LF+ M ERNV+SWN+M+ Y ++ KEA L F ++ + K D
Sbjct: 289 ----------TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+G L+ CA L +++ G+ +H N+ V N+L+ MY KC + +A F +
Sbjct: 339 SVMG-ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
+ Q R VSWNA++ G+A+ G+ +A+ FS+M+ T +P FT+ +++ A A +S
Sbjct: 398 L-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
K IH V+R+C + NV ALV++Y KC + A +F S V N+MI G+
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G+ ALE+F M+K IKP+ +TF ++ AC H G V+ L+ F M+ Y I ++
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY M+ L R G + E DF+ +MP P V + + C+ + E AA RL EL
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 676 NP 677
NP
Sbjct: 637 NP 638
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 278/564 (49%), Gaps = 51/564 (9%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EPV Y+ + +L ++C + +++ LV + +F + Y KC +++AR
Sbjct: 132 EPVVYN-FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FD MPERD SWN ++ Y+QNG LE+ M + + IT +VL + +
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ V K++HG ++ GF V + ++LVD Y KC + AR++FD + +N VSWN ++
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ N KEA+++F KML E ++P + + AL AC+ L G IH + +++ +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V+ SL MY KC ++ A + + R ++SW +++ G+A +GR +A F++M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R V D T ++ A LS K
Sbjct: 431 SRTV-------------------------------KPDTFTYVSVITAIAELSITHHAKW 459
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + R+ N+FV+ AL+DMY KCG + AR+ F MS+R +WNA++ GY G
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTHG 518
Query: 458 QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCY--EINVV 513
+ A+ F EMQ T +P+ TF ++++AC++ +E G + CF +++ Y E+++
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG--LKCFYMMKENYSIELSMD 576
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH-----NERGREALEVFGL 568
GA+V++ + L A + + +LG C N + A +F L
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 569 MKKEGIKPDHITFHGILLACIHEG 592
PD +H +LLA I+
Sbjct: 637 ------NPDDGGYH-VLLANIYRA 653
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 223/437 (51%), Gaps = 38/437 (8%)
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SS +EL +Q+ L+ K G ++ LV + + + +A R+F+ I +K V
Sbjct: 48 SSLKEL-----RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
++ +++ + + +A+ F +M +D+ P+ + F L C + G +IHG+++
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K F D + L MY KC ++ +AR + D+ ER+++SW +IV+GY+ +G R A E
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M E N+ K + +T+ +L + L
Sbjct: 223 MVKSMCEENL----------------KPSF---------------ITIVSVLPAVSALRL 251
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
I +GKE+HG+ R+ + S + +S AL+DMY KCG+L +AR F M + R+ VSWN+++
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE-RNVVSWNSMID 310
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
Y + +EAM F +M E +P+ + L ACA++ LE+G+ IH + +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
NV +L+ +Y KC ++ A +F + S ++ N+MILGF N R +AL F M+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 571 KEGIKPDHITFHGILLA 587
+KPD T+ ++ A
Sbjct: 431 SRTVKPDTFTYVSVITA 447
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 285/535 (53%), Gaps = 7/535 (1%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L S + L KQLHG I+ G + L S LV Y + +A + +
Sbjct: 85 LLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFR 144
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
SWN+++ Y+ + A++ + +M+ + +RP NFTF + L AC + G+++H
Sbjct: 145 PCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHK 204
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I V +L MY +CG ++ AR L D ER+ +SW S++S Y+ G RE
Sbjct: 205 SINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWRE 264
Query: 329 ARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
A ELF M E NV++WN + G R + +AL + MR +D V + + L
Sbjct: 265 AFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLG 324
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C+ + I++GKE+HGF R+ + V NAL+ MY +C ++R A + F +++ + ++
Sbjct: 325 ACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLF-RLNDDKSRI 383
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+WN++L+G G+ EEA+ F E+ + P TF ++L CA ++ L+ G++ HC++
Sbjct: 384 TWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYI 443
Query: 504 IRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++ + +++ ALV++Y + + A R+F S D + S+I G+ G +A
Sbjct: 444 TKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKA 503
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ +F MK+ IKPDHIT +L AC H G V A F M+ +G+ P+LEHY CM
Sbjct: 504 VRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMAD 563
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L+ R G + + ++ + RMP+ PT + + C +G +GEWAA +L E+ P
Sbjct: 564 LFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRP 618
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 221/483 (45%), Gaps = 69/483 (14%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S ++ ++L ++++ FL+++ + Y L +A L + SW
Sbjct: 89 CTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRPCSW 148
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ++ +Y ++ + + M GV + T+ ++L++ E L ++H I
Sbjct: 149 NILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINS 208
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
++ + ++L+ YG+C + AR +FD++ ++AVSWN ++ Y G +EA +
Sbjct: 209 WSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFEL 268
Query: 232 FFKMLRE---------------DIRPLNFTFANALF--------------------ACSF 256
F M + +R NFT A L ACS
Sbjct: 269 FESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSH 328
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ + G +IHG I+ V +L MY +C + A L D+++ I+W S+
Sbjct: 329 IGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSM 388
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG GR+ EA LF E+ +L G + D
Sbjct: 389 LSGLTHLGRVEEALCLFREL----------LLFGV---------------------EPDY 417
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT IL +CA +++++ G+E H +I ++ D+ ++ + NAL+DMY + G + A+ FY
Sbjct: 418 VTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFY 477
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
+S ++D+V++ +++ GY +G+ +A+ F EM+ ++ +P T +L+AC++ +
Sbjct: 478 SLS-KKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVN 536
Query: 495 QGK 497
Q +
Sbjct: 537 QAE 539
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 9/257 (3%)
Query: 359 EALDFVFLMRKTTKDIDQV--TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
EA + L D + ++ ++L C S + GK++HG I + + F+ +
Sbjct: 60 EAFSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSK 119
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRP 475
L+ Y L A + S SWN ++T Y + E A+ ++ +M + RP
Sbjct: 120 LVMFYSSLEFLPEAHT-LVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRP 178
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
FTF ++L AC +L+ G ++H + ++ AL+ +Y +C ++ A +F
Sbjct: 179 DNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLF 238
Query: 536 KESSSLDVIICNSMILGFCHNERG--REALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
D + NSMI C++ RG REA E+F M+ + ++ + +T++ I C+ GN
Sbjct: 239 DNMLERDAVSWNSMI--SCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGN 296
Query: 594 VKLALQFFDSMRCKYGI 610
AL+ MR +GI
Sbjct: 297 FTQALKLLSQMR-NFGI 312
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 188/644 (29%), Positives = 319/644 (49%), Gaps = 44/644 (6%)
Query: 41 SYSLYAHLFQLCASSK-----AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
++ Y L Q C+ + I+ R +ES+ P L N I YG+CG L+D
Sbjct: 200 NFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETP-----LCNALITMYGRCGRLED 254
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR +F M ERD +WNA++ Y Q+G + L+ M G +++T+ +L S
Sbjct: 255 ARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNG 314
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L K +H IV+ G N+ L ++LV Y KC + D R +F+ + +N +SWNV+
Sbjct: 315 PEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVM 374
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V Y G G++AV + M + ++P N T L C+ + G ++HG I +
Sbjct: 375 VTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAE--- 431
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
GR E ++I W S+++ Y G + +A +F+
Sbjct: 432 -----------------GRCE-----------ADLILWNSLLNMYGRCGEVEQAEMVFDG 463
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ +RNVISW AML Y+R AL + + +T L+ C G + G
Sbjct: 464 ILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKG 523
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ VH ++ +++ + +AL+ MY +CG++R A+ F R++ V+W+A++ + +
Sbjct: 524 RLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQ 583
Query: 456 RGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV-V 513
GQ E + MQ + S TF + L+AC+N++ L +GK+IH +V ++
Sbjct: 584 HGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAAT 643
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+LV +Y KC L+ A VF+ S D+I N++I G+ + + R+A+E+F M++EG
Sbjct: 644 VTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEG 703
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
+ PD +TF IL C H G + + + SM + G+ P ++Y C+I L R G ++E
Sbjct: 704 VTPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELGLEPTQDNYACVIDLLGRAGKLQEA 762
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
E+F+ + P + L + C+ +G G AA + E++P
Sbjct: 763 EEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDP 806
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 253/547 (46%), Gaps = 36/547 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L Q C KA+ AR+L S +V VFL N I YGKC +LDDA F+ M
Sbjct: 3 YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ +W A++G + + L M GV + IT L S L K
Sbjct: 63 YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGLI + G ++ILE++LV YG C + DA+R+FD + +N ++W ++ + A
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAH--AET 180
Query: 225 GKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
E F+++ + NF T+ + ACS G+ +H ++ + +
Sbjct: 181 SLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCN 240
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY +CGRLEDAR + ER+II+W ++++ Y G + EA L+
Sbjct: 241 ALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQ--------- 291
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
LM + D+VT +L + G + K VH I
Sbjct: 292 ----------------------LMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIV 329
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S NI + AL+ MY KC +L R W ++ +R+ +SWN ++T YA+ G +A+
Sbjct: 330 ESGVSINIALGTALVAMYSKCESLEDTR-WLFEKMPQRNVISWNVMVTAYAKHGLGRKAV 388
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
MQ + +P T LL C + L+ G+++H ++ E +++ +L+ +Y
Sbjct: 389 QITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMY 448
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+C +E A VF +VI +M+ + R AL +F + G+KP ITF
Sbjct: 449 GRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFL 508
Query: 583 GILLACI 589
L AC+
Sbjct: 509 EALDACV 515
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 234/495 (47%), Gaps = 41/495 (8%)
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ Y +L++ + L ++++LH IV+ V L + L+ YGKC + DA F+
Sbjct: 1 VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ KN +W I+ A+++ +ML E ++P N T AL +C + G
Sbjct: 61 MSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAG 120
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IHG+I + + D ++ +L MY C
Sbjct: 121 KLIHGLIAQSGHQCDLILENALVSMYGSC------------------------------- 149
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G + +A+ +F+ MP RNVI+W AM+ + + L ++A LM + VT ++
Sbjct: 150 GSVDDAKRVFDAMPARNVITWTAMIGAHAETSL-EQAFKVFRLMELEGFKSNFVTYVTLV 208
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C+ +++G +H + + + NAL+ MY +CG L AR F M +R D
Sbjct: 209 QACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVER-DI 267
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
++WNA++T Y + G EEA+ + M E +P K TF LL +L K +H
Sbjct: 268 IAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSH 327
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++ + IN+ ALV +Y+KC LE +F++ +VI N M+ + + GR+A
Sbjct: 328 IVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKA 387
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ---FFDSMRCKYGIIPQLEHYEC 619
+++ M+ +G+KPD++T G+L C ++KL + + RC+ +I +
Sbjct: 388 VQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLIL----WNS 443
Query: 620 MIKLYCRYGYMKELE 634
++ +Y R G +++ E
Sbjct: 444 LLNMYGRCGEVEQAE 458
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 320/621 (51%), Gaps = 45/621 (7%)
Query: 80 LNRAIECYGKCGNLDD----ARGLFDEMPERDGGS---WNAMLGAYTQNGFPGRTLELFL 132
L+R ++C L A LF M + DG WN L + Q G ++ F+
Sbjct: 867 LSRVVKCKKNILELKQFKAYATKLF--MYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFV 924
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
DM +S V+ + +T+ +L A L + KQ+HG++++ G V + + L++ Y K
Sbjct: 925 DMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAG 984
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ AR +F + + +SWN ++ ++G + +V MF +LR+ + P FT A+ L
Sbjct: 985 SVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLR 1044
Query: 253 ACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
ACS L Y QIH +K D V +L ++Y K G++E
Sbjct: 1045 ACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME--------------- 1089
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
EA LF ++ SWNA++ GY S + +AL LM+++
Sbjct: 1090 ----------------EAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESG 1133
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ DQ+TL GL +K GK++H + + ++ ++FV++ +LDMY KCG + SAR
Sbjct: 1134 ERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESAR 1193
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANI 490
F ++ D V+W +++G GQ E A+ ++ +M+ + +P ++TF TL+ AC+ +
Sbjct: 1194 RVFSEIPSP-DDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL 1252
Query: 491 SSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
++LEQG+QIH +++ NC + +LV++Y KC +E A +FK +++ + N+M
Sbjct: 1253 TALEQGRQIHANIVKLNC-AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAM 1311
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I+G + +EAL+ F MK G+ PD +TF G+L AC H G V A + F SM+ YG
Sbjct: 1312 IVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYG 1371
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P++EHY C++ R G ++E E ++ MPF + M R + + CR G+ A
Sbjct: 1372 IEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVA 1431
Query: 670 RRLNELNPWAPFQFKITTNRF 690
+L L P + + +N +
Sbjct: 1432 EKLLALEPSDSAAYVLLSNVY 1452
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 171/632 (27%), Positives = 276/632 (43%), Gaps = 66/632 (10%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T HL P +S+ L Q A+S + ++ + ++T P F+ N I Y
Sbjct: 647 TPRAHLIHSLPQCFSI---LRQAIAASD-LSLGKRAHARILTSGHHPDRFVTNNLITMYA 702
Query: 89 KCGNLDDARGLFDEMPE--RDGGSWNAMLGAYTQNGFPGRT-LELFLDMNHSGVSANQIT 145
KCG+L AR LFD P+ RD +WNA+L A + LF + S VS + T
Sbjct: 703 KCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHT 762
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
A V + S+ LHG VK G +V + +LV+ Y K ++ +AR +FD +
Sbjct: 763 LAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA 822
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ V WNV+++ Y+ EA+++F + R RP + T + E Q
Sbjct: 823 VRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQ 882
Query: 266 IHGVIIKI---DFEGDDVVL--GSLTEMYVKCGRLEDARGLLDQPDER------NIISWT 314
K+ D +G DV++ +L+ + E +D + R +
Sbjct: 883 FKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVML 942
Query: 315 SIVSG--------------------------------YAISGRIREARELFNEMPERNVI 342
++V+G Y +G + AR +F +M E ++I
Sbjct: 943 TVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLI 1002
Query: 343 SWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGL-SEIKMGKEVHG 400
SWN M++G T S L + ++ FV L+R + DQ T+ +L C+ L + ++H
Sbjct: 1003 SWNTMISGCTLSGLEECSVGMFVHLLRDSLLP-DQFTVASVLRACSSLEGGYYLATQIHA 1061
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + FVS AL+D+Y K G + A F D SWNA++ GY G
Sbjct: 1062 CAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDG-FDLASWNAIMHGYIVSGDFP 1120
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A+ + MQ R + T A + L+QGKQIH V++ + +++ ++
Sbjct: 1121 KALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVL 1180
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC +E A RVF E S D + +MI G N + AL + M+ ++PD
Sbjct: 1181 DMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEY 1240
Query: 580 TFHGILLAC-----------IHEGNVKLALQF 600
TF ++ AC IH VKL F
Sbjct: 1241 TFATLVKACSLLTALEQGRQIHANIVKLNCAF 1272
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 164/296 (55%), Gaps = 4/296 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y K G +++A LF D SWNA++ Y +G + L L++ M S
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQES 1132
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G ++QIT N +++ + L KQ+H ++VKRGF ++ + S ++D Y KC M A
Sbjct: 1133 GERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESA 1192
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+F +I + + V+W ++ + G + A+ + +M ++P +TFA + ACS L
Sbjct: 1193 RRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLL 1252
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G QIH I+K++ D V+ SL +MY KCG +EDARGL + + R I SW +++
Sbjct: 1253 TALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMI 1312
Query: 318 SGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
G A G +EA + F M R V +++ +L+ + S L EA + + M+K
Sbjct: 1313 VGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQK 1368
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + ++ Y KCG ++ AR +F E+P D +W M+ +NG L + M
Sbjct: 1173 LFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRL 1232
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V ++ T+A ++++ + L +Q+H IVK + + +SLVD Y KC + D
Sbjct: 1233 SKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIED 1292
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +F + SWN ++ GN KEA+ F M + P TF L ACS
Sbjct: 1293 ARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSH 1352
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G ++E Y ++ G+ E I ++ +
Sbjct: 1353 -------------------------SGLVSEAYENFYSMQKNYGI-----EPEIEHYSCL 1382
Query: 317 VSGYAISGRIREARELFNEMP 337
V + +GRI EA ++ + MP
Sbjct: 1383 VDALSRAGRIEEAEKVISSMP 1403
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+ +A L + C+ A+ + R++ +N+V F++ ++ Y KCGN++DAR
Sbjct: 1236 QPDEYT-FATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1294
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
GLF R SWNAM+ Q+G L+ F M GV +++T+ VL +
Sbjct: 1295 GLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSA 1349
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 76/183 (41%), Gaps = 8/183 (4%)
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES- 538
F L A A S L GK+ H ++ + + + L+ +Y KC L A ++F +
Sbjct: 660 FSILRQAIA-ASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718
Query: 539 -SSLDVIICNSMILGF-CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
++ D++ N+++ H ++ + +F L+++ + T + C+ +
Sbjct: 719 DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPS- 777
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV---PMLRKIF 653
A + K G+ + ++ +Y ++G ++E + M V M++
Sbjct: 778 ASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYV 837
Query: 654 DKC 656
D C
Sbjct: 838 DTC 840
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 189/667 (28%), Positives = 329/667 (49%), Gaps = 51/667 (7%)
Query: 21 TPSKTLTKTISG-------HLKSDE----PVSYSLYAHLFQLCASSKAIVEA----RKLE 65
T S+ L +SG HL S + PV + L +LC + + E + +
Sbjct: 1 TNSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVL 60
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
S+LVT V L N + + + G++ +A +F M ERD SWN ++G YT+ GF
Sbjct: 61 SSLVTLLS---VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFD 117
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
L L+ + +G+ + T+ +VLRS A ++L +++H +V+ F +V + ++L+
Sbjct: 118 EALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALI 177
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC + AR +FD + ++ +SWN ++ Y E + +FF+M I P
Sbjct: 178 TMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLM 237
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
T + + AC L G Q+H +++ ++G+ V SL +MY+ G
Sbjct: 238 TMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGH----------- 286
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
W +EA +F+ M R+V+SW +++G +LL +AL+
Sbjct: 287 -------W-------------KEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYK 326
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M T D+VT+ +L+ CA L ++ MG ++H R + + V+N+L+DMY KC
Sbjct: 327 TMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCK 386
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
+ A F+Q+ + D +SW +V+ G + EA+ F +M +++P+ T + L+
Sbjct: 387 RIEKALEIFHQIPDK-DVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALS 445
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
ACA + +L GK+IH ++ + A++++Y +C + A+ F + DV
Sbjct: 446 ACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNEK-DVGA 504
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
N ++ G+ +G +E+F M + I PD +TF +L AC G V L++F M+
Sbjct: 505 WNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMK 564
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
Y I P L+HY C++ L R G + E +F+ RMP P + + + CR + + LG
Sbjct: 565 VNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLG 624
Query: 666 EWAARRL 672
E AA+ +
Sbjct: 625 ELAAQHI 631
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 286/537 (53%), Gaps = 13/537 (2%)
Query: 163 KQLHGLIVKRG-----FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
KQ+H I+K G F + ++E V +G ++ A +F I+N N V WN ++R
Sbjct: 45 KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGD---LSYALSLFKTIRNPNHVIWNHMIR 101
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ + A+ + M+ P +TF + +C+ + +EG Q+H ++K+ E
Sbjct: 102 GLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEH 161
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V SL MY + G L +AR + D+ R+ +S+T++++GYA G + EARELF+E+P
Sbjct: 162 NAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIP 221
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA-GLSEIKMGK 396
R+V+SWNAM++GY +S +EA+ F MR+ + T+ +L+ CA S +++G
Sbjct: 222 VRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGN 281
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
V +I SNI + N L+DMY KCG+L A F ++ Q ++ VSWN ++ GY
Sbjct: 282 WVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI-QDKNVVSWNVMIGGYTHM 340
Query: 457 GQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVV 513
+EA+ F MQ P+ TF ++L ACAN+ +L+ GK +H +V +N + V
Sbjct: 341 SCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVA 400
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+L+++Y KC L A R+F ++ + N+MI GF + AL +F M EG
Sbjct: 401 LWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEG 460
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
PD ITF G+L AC H G + L ++F SM Y + P+L HY CMI L+ R G E
Sbjct: 461 FVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEA 520
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
E V M P + + CR + L E A+ L EL P P + + +N +
Sbjct: 521 ETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIY 577
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/594 (24%), Positives = 259/594 (43%), Gaps = 94/594 (15%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
+LS S P P P K L D P L ++ K + +++ S ++
Sbjct: 13 VLSFSDPSP-PYK---------LVHDHPS--------LTLLSNCKTLQTLKQIHSQIIKT 54
Query: 72 YPTPPVFLLNRAIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
F L++ IE G+L A LF + + WN M+ + + P LE
Sbjct: 55 GLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALE 114
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
++ M SG N+ T+ ++ +S + KQ+H ++K G N + +SL++ Y
Sbjct: 115 YYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYA 174
Query: 190 K-----------------------CMV--------MTDARRMFDDIQNKNAVSWNVIVRR 218
+ ++ + +AR +FD+I ++ VSWN ++
Sbjct: 175 QNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISG 234
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFEG 277
Y +G +EA+ F +M R + P T + L AC+ S + G + I
Sbjct: 235 YAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGS 294
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ ++ L +MYVKCG LE+A L ++ ++N++SW ++ GY +EA LF M
Sbjct: 295 NIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMM 354
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ N+ D + VT IL CA L + +GK
Sbjct: 355 QSNI-------------------------------DPNDVTFLSILPACANLGALDLGKW 383
Query: 398 VHGFIHRNDYS--SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
VH ++ +N S + + + +L+DMY KCG+L A+ F M+ + +WNA+++G+A
Sbjct: 384 VHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNT-KSLATWNAMISGFAM 442
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN--V 512
G ++ A+ FS M E P TF +L AC + L G++ +I++ Y+++ +
Sbjct: 443 HGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQD-YKVSPKL 501
Query: 513 VCRGALVEVYTKCCCLEYAIRVFK--ESSSLDVIICNSMILGFCHNERGREALE 564
G +++++ + + A + K E I C+ +LG C R E E
Sbjct: 502 PHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCS--LLGACRIHRRIELAE 553
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 40/408 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y G LD+AR LFDE+P RD SWNAM+ Y Q+G + F +M + V+ N
Sbjct: 201 ITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV 260
Query: 144 ITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
T +VL + A+ L+LG + I RG N+ L + L+D Y KC + +A +
Sbjct: 261 STMLSVLSACAQSGSSLQLG--NWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNL 318
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+ IQ+KN VSWNV++ Y KEA+ +F +M++ +I P + TF + L AC+ L +
Sbjct: 319 FEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGAL 378
Query: 261 YEGMQIHGVIIK--IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G +H + K + + SL +MY KCG L A+ + D + +++ +W +++S
Sbjct: 379 DLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMIS 438
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G+A+ G A LF+ M + D +T
Sbjct: 439 GFAMHGHTDTALGLFSRMTSEGFVP-------------------------------DDIT 467
Query: 379 LGLILNVCAGLSEIKMGKE-VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+L C + +G+ I S + ++D++ + G A M
Sbjct: 468 FVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNM 527
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
+ D W ++L G R + E S ++ +E P + LL+
Sbjct: 528 EMKPDGAIWCSLL-GACRIHRRIELAESVAKHLFELEPENPSAYVLLS 574
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 144/302 (47%), Gaps = 25/302 (8%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
QL ++ +E R L SN + L+N I+ Y KCG+L++A LF+++ +++
Sbjct: 277 LQLGNWVRSWIEDRGLGSN---------IRLVNGLIDMYVKCGDLEEASNLFEKIQDKNV 327
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWN M+G YT L LF M S + N +T+ ++L + A L + K +H
Sbjct: 328 VSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387
Query: 169 IVK--RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+ K + V L +SL+D Y KC + A+R+FD + K+ +WN ++ + + G+
Sbjct: 388 VDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTD 447
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGS 284
A+ +F +M E P + TF L AC G + +I+ D++ + G
Sbjct: 448 TALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQ-DYKVSPKLPHYGC 506
Query: 285 LTEMYVKCGRLEDARGLLD----QPDERNIISWTSIVSGYAISGRIR----EARELFNEM 336
+ +++ + G ++A L+ +PD W S++ I RI A+ LF
Sbjct: 507 MIDLFGRAGLFDEAETLVKNMEMKPDG---AIWCSLLGACRIHRRIELAESVAKHLFELE 563
Query: 337 PE 338
PE
Sbjct: 564 PE 565
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 187/605 (30%), Positives = 310/605 (51%), Gaps = 36/605 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-- 134
VF+ N I YGK G +D A +F MP R+ SWN+++ +++NGF ++ ++M
Sbjct: 66 VFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMA 125
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ + T VL A E+++ + ++HGL VK G +V + +SLVD Y KC +
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFA 253
T+A+ +FD KNAVSWN ++ G EA +F +M ++EDI T N L A
Sbjct: 186 TEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPA 245
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C +S ++HG I+ F+ D++V Y KCG L A + + + + SW
Sbjct: 246 CLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSW 305
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+++ G A +G R+A L+ +M ++
Sbjct: 306 NALIGGCAQNGDPRKALNLYIQMTYSGLVP------------------------------ 335
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D T+G +L A L ++ GKEVHGF+ R+ + F+ +LL +Y CG SAR+
Sbjct: 336 -DWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLL 394
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F M + + VSWNA+++GY++ G E+A+ F ++ + +PS ++L AC+ S+
Sbjct: 395 FDGM-EEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSA 453
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GK+ HC+ ++ +V + +++Y K C++ + VF + D+ N++I
Sbjct: 454 LRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAA 513
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + G E++E+F M+K G PD TF GIL C H G V+ L++F+ M+ +GI P
Sbjct: 514 YGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEP 573
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY C++ + R G + + V+ MP P + + CR G +G+ A +L
Sbjct: 574 KLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKL 633
Query: 673 NELNP 677
EL P
Sbjct: 634 LELEP 638
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 235/485 (48%), Gaps = 35/485 (7%)
Query: 117 AYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
A +N +++F+ + + +A+ T+ V+++ L+ G+ + +HG+++K G
Sbjct: 4 AVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLL 63
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+V + ++L+ YGK + A ++F + +N VSWN I+ + G K+ M +M
Sbjct: 64 LDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEM 123
Query: 236 L--REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+ E + P T L C+ G++IHG+ +K+ D V SL +MY KCG
Sbjct: 124 MAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCG 183
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
L +A+ L D+ + +N +SW +++ G G I EA LF EM + I
Sbjct: 184 YLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDI----------- 232
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
++++VT+ IL C +S+++ KE+HG+ R+ + + V
Sbjct: 233 -------------------EVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELV 273
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
+N + Y KCG L A FY M + SWNA++ G A+ G +A+ + +M +
Sbjct: 274 ANGFVAAYAKCGMLICAERVFYSMETKTVN-SWNALIGGCAQNGDPRKALNLYIQMTYSG 332
Query: 474 R-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P FT +LL A A++ SL GK++H FV+R+ EI+ +L+ +Y C A
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSAR 392
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+F + N+MI G+ N +AL +F + +G +P I +L AC +
Sbjct: 393 LLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQS 452
Query: 593 NVKLA 597
++L
Sbjct: 453 ALRLG 457
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 162/332 (48%), Gaps = 38/332 (11%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y CG AR LFD M E+ SWNAM+ Y+QNG P L LF + G + I
Sbjct: 382 YIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAV 441
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+VL + +++ L + K+ H +K +V + S +D Y K + ++R +FD ++N
Sbjct: 442 VSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKN 501
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ- 265
K+ SWN I+ Y V G+G+E++ +F +M + P FTF L CS EG++
Sbjct: 502 KDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKY 561
Query: 266 ------IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL----DQPDERNIISWTS 315
HG+ K++ + +M + GRL+DA L+ +QPD R W+S
Sbjct: 562 FNEMQNFHGIEPKLEH------YACVMDMLGRAGRLDDALRLVHEMPEQPDSR---VWSS 612
Query: 316 IVS-----GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
++S G G+I + L E+ +NV ++ ++ Y S W D V +R+
Sbjct: 613 LLSFCRNFGELEIGQIVAEKLL--ELEPKNVENYVSLSNLYAGSGRW----DDVRRVRQM 666
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
KDI L AG S I++G +VH F+
Sbjct: 667 IKDIG-------LQKDAGCSWIELGGKVHSFV 691
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 194/659 (29%), Positives = 331/659 (50%), Gaps = 34/659 (5%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+ + P + Y+ L + C + + + L+ +LN I Y KCG+ +
Sbjct: 19 QQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTE 78
Query: 95 DARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
AR +F+ M +RD SW+AM+ + N + + FLDM G N+ +A V+R+
Sbjct: 79 TARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRAC 138
Query: 154 AEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGK-CMVMTDARRMFDDIQNKNAVS 211
+ V + ++G +VK G+ +V + L+D + K + A ++FD + +N V+
Sbjct: 139 SNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVT 198
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W +++ R+ G ++A+ +F M P FT+++ L AC+ L G Q+H +I
Sbjct: 199 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 258
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
++ D V SL +MY KC A G + ++R+
Sbjct: 259 RLGLALDVCVGCSLVDMYAKC----------------------------AADGSVDDSRK 290
Query: 332 LFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +MPE NV+SW A++ Y +S KEA++ M + + +L C LS
Sbjct: 291 VFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLS 350
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G++V+ + + +S V N+L+ MY + G + AR F + ++ + VS+NA++
Sbjct: 351 DPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIV 409
Query: 451 TGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
GYA+ +SEEA F+E+ S FTF +LL+ A+I ++ +G+QIH +++ Y+
Sbjct: 410 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 469
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
N AL+ +Y++C +E A +VF E +VI SMI GF + ALE+F M
Sbjct: 470 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 529
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ G KP+ IT+ +L AC H G + + F+SM ++GI+P++EHY CM+ L R G
Sbjct: 530 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 589
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ E +F+N MP + R + CR +G LG AA + E P P + + +N
Sbjct: 590 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 648
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 258/565 (45%), Gaps = 85/565 (15%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
TL+L M + TY+ +L+S + K +H +++ G + ++ ++L+
Sbjct: 13 TLDL---MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 187 AYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC AR +F+ + NK + VSW+ +V + +A+ F ML P +
Sbjct: 70 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVK-CGRLEDARGLLD 303
FA + ACS + + G I+G ++K + DV +G L +M+VK G L A + D
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ERN+++WT +++ +A G R+A +LF +M L+GY
Sbjct: 190 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDME----------LSGYVP---------- 229
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D+ T +L+ C L + +GK++H + R + ++ V +L+DMY K
Sbjct: 230 -----------DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAK 278
Query: 424 C---GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE-EAMTSFSEM-QWETRPSKF 478
C G++ +R F QM + + +SW A++T Y + G+ + EA+ F +M RP+ F
Sbjct: 279 CAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 337
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKCCCLEYAIRVFKE 537
+F ++L AC N+S G+Q++ + ++ +V C G +L+ +Y + +E A + F
Sbjct: 338 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-SVNCVGNSLISMYARSGRMEDARKAFDI 396
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF---------------- 581
+++ N+++ G+ N + EA +F + GI TF
Sbjct: 397 LFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 456
Query: 582 ---HGILL-------ACIHE---------GNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
HG LL CI GN++ A Q F+ M + I + MI
Sbjct: 457 EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI-----SWTSMIT 511
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVP 647
+ ++G+ + ++M T P
Sbjct: 512 GFAKHGFATRALEMFHKMLETGTKP 536
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 195/672 (29%), Positives = 325/672 (48%), Gaps = 59/672 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C KA+ + + S+L+ + V++ + Y L DA LFDEMP ++ +W
Sbjct: 13 CGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTW 72
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQLHGLIV 170
M+ AYT NG P ++L+ M S N Y+ VL++ E+ + + +H
Sbjct: 73 TTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFS 132
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAV 229
+ +++L ++L+D Y KC ++DAR++FD I N+ SWN ++ Y G +EAV
Sbjct: 133 RENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAV 192
Query: 230 VMF------------------------------FKMLREDIRPLNFTFANALFACSFLSS 259
+F KM RE I+ FTF AL CS+
Sbjct: 193 NLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGF 252
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G QIH ++K E + +L +MY C L+DA L DQ SG
Sbjct: 253 LVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQ------------YSG 300
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+G I ++ ++ WN+ML+GY + A++ + + + +D TL
Sbjct: 301 G--TGSICDS-----------LVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTL 347
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
L VC L +++G +VH I + + + V + L+D+Y K GN++ A F+++
Sbjct: 348 SSALKVCINLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLP- 406
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
++D V+W+ +L G A+ + A++ F +M + ++ +L C++++S+ GKQ
Sbjct: 407 KKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQ 466
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H F I+ YE V AL+++Y+KC +E + +F + DV+ +I+G N R
Sbjct: 467 VHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGR 526
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
EALE+F M + G+KP+ +T+ G+L AC H G V A F +M+C + + PQLEHY
Sbjct: 527 ANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYY 586
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
CM+ L C+ GY KE+E + MPF P + + C + L A L P
Sbjct: 587 CMVDLLCQAGYFKEVEKLIAEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPN 646
Query: 679 APFQFKITTNRF 690
P + + +N +
Sbjct: 647 DPSIYVMLSNAY 658
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 194/659 (29%), Positives = 331/659 (50%), Gaps = 34/659 (5%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+ + P + Y+ L + C + + + L+ +LN I Y KCG+ +
Sbjct: 37 QQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTE 96
Query: 95 DARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
AR +F+ M +RD SW+AM+ + N + + FLDM G N+ +A V+R+
Sbjct: 97 TARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRAC 156
Query: 154 AEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGK-CMVMTDARRMFDDIQNKNAVS 211
+ V + ++G +VK G+ +V + L+D + K + A ++FD + +N V+
Sbjct: 157 SNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVT 216
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W +++ R+ G ++A+ +F M P FT+++ L AC+ L G Q+H +I
Sbjct: 217 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 276
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
++ D V SL +MY KC A G + ++R+
Sbjct: 277 RLGLALDVCVGCSLVDMYAKC----------------------------AADGSVDDSRK 308
Query: 332 LFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +MPE NV+SW A++ Y +S KEA++ M + + +L C LS
Sbjct: 309 VFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLS 368
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G++V+ + + +S V N+L+ MY + G + AR F + ++ + VS+NA++
Sbjct: 369 DPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIV 427
Query: 451 TGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
GYA+ +SEEA F+E+ S FTF +LL+ A+I ++ +G+QIH +++ Y+
Sbjct: 428 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 487
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
N AL+ +Y++C +E A +VF E +VI SMI GF + ALE+F M
Sbjct: 488 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 547
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ G KP+ IT+ +L AC H G + + F+SM ++GI+P++EHY CM+ L R G
Sbjct: 548 LETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGL 607
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ E +F+N MP + R + CR +G LG AA + E P P + + +N
Sbjct: 608 LVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 666
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 258/565 (45%), Gaps = 85/565 (15%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
TL+L M + TY+ +L+S + K +H +++ G + ++ ++L+
Sbjct: 31 TLDL---MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 187 AYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC AR +F+ + NK + VSW+ +V + +A+ F ML P +
Sbjct: 88 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVK-CGRLEDARGLLD 303
FA + ACS + + G I+G ++K + DV +G L +M+VK G L A + D
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ERN+++WT +++ +A G R+A +LF +M L+GY
Sbjct: 208 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDME----------LSGYVP---------- 247
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D+ T +L+ C L + +GK++H + R + ++ V +L+DMY K
Sbjct: 248 -----------DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAK 296
Query: 424 C---GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE-EAMTSFSEM-QWETRPSKF 478
C G++ +R F QM + + +SW A++T Y + G+ + EA+ F +M RP+ F
Sbjct: 297 CAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 355
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKCCCLEYAIRVFKE 537
+F ++L AC N+S G+Q++ + ++ +V C G +L+ +Y + +E A + F
Sbjct: 356 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-SVNCVGNSLISMYARSGRMEDARKAFDI 414
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF---------------- 581
+++ N+++ G+ N + EA +F + GI TF
Sbjct: 415 LFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 474
Query: 582 ---HGILL-------ACIHE---------GNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
HG LL CI GN++ A Q F+ M + I + MI
Sbjct: 475 EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI-----SWTSMIT 529
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVP 647
+ ++G+ + ++M T P
Sbjct: 530 GFAKHGFATRALEMFHKMLETGTKP 554
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 205/423 (48%), Gaps = 41/423 (9%)
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
R L G A M +++ P T++ L +C + G +H +++ E
Sbjct: 18 RQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLEL 77
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VVL +L +Y KCG E AR + + ++R+++SW+++VS +A
Sbjct: 78 DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA--------------- 122
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
N + W A+ + + L+ F ++ ++ C+ + +G+
Sbjct: 123 --NNSMEWQAIWT-------FLDMLELGFYP-------NEYCFAAVIRACSNANYAWVGE 166
Query: 397 EVHGFIHRNDY-SSNIFVSNALLDMYRK-CGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
++GF+ + Y +++ V L+DM+ K G+L SA F +M + R+ V+W ++T +A
Sbjct: 167 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFA 225
Query: 455 RRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G + +A+ F +M+ P +FT+ ++L+AC + L GKQ+H VIR ++V
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285
Query: 514 CRGALVEVYTKCCC---LEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREALEVFGLM 569
+LV++Y KC ++ + +VF++ +V+ ++I + + E +EA+E+F M
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
I+P+H +F +L AC + + Q + S K GI +I +Y R G
Sbjct: 346 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-SYAVKLGIASVNCVGNSLISMYARSGR 404
Query: 630 MKE 632
M++
Sbjct: 405 MED 407
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/595 (29%), Positives = 305/595 (51%), Gaps = 33/595 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKC +LDDA F M ER+ SW A + QN R +ELF+ M G+ +Q
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQ 252
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+ RS A L ++QLH +K F + ++ +++VD Y K + DARR F
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIG 312
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ + N + N ++ + G G EA+ +F M R + + + AC+ + ++G
Sbjct: 313 LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQG 372
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+H + +K F+ D V ++ ++Y KC L +A + + ++R+ +SW +I++
Sbjct: 373 LQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ- 431
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
NE E + N ML ++ + D T G +L
Sbjct: 432 ----------NECYEDTIAHLNEML--------------------RSGMEPDDFTYGSVL 461
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAGL ++ G VHG ++ + FVS+ ++DMY KCG + A+ ++ ++
Sbjct: 462 KACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG-QEL 520
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWN++++G++ QSEEA FSEM +P FT+ T+L CAN++++E GKQIH
Sbjct: 521 VSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQ 580
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+I+ + LV++Y KC + ++ +F+++ LD + N+MI G+ + +G EA
Sbjct: 581 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEA 640
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
LE+F M++ + P+H TF +L AC H G + Q+F M +Y ++PQLEH+ CM+
Sbjct: 641 LEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVD 700
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R +E +F+ MP + + + C+ + E AA + L+P
Sbjct: 701 ILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDP 755
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 270/595 (45%), Gaps = 66/595 (11%)
Query: 40 VSYSLYAHLFQLCASS--KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
V+ + ++HL+QLCAS+ A+ + + ++ P F+ N ++ Y +CG A
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-------------------------- 131
G+FD MP RD SWN ML AY G LF
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 132 -----LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
++M+ GV+ ++ T A +L+S +L + Q+H L VK G +V S+LVD
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
YGKC + DA R F + +N+VSW + + + +F +M R +
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPA 254
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
+A+A +C+ + Q+H IK F D VV ++ ++Y K G L D
Sbjct: 255 YASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVD--------- 305
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
AR F +P NV + NAM+ G R+ L EA+
Sbjct: 306 ----------------------ARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQF 343
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M ++ D ++L + + CA + G +VH ++ + ++ V NA+LD+Y KC
Sbjct: 344 MTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKA 403
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA 485
L A + F +M Q RD VSWNA++ + E+ + +EM + P FT+ ++L
Sbjct: 404 LVEAYLVFQEMEQ-RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLK 462
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
ACA + SLE G +H I++ ++ +V++Y KC + A ++ +++
Sbjct: 463 ACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVS 522
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
NS+I GF ++ EA F M G+KPDH T+ +L C + ++L Q
Sbjct: 523 WNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQI 577
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 176/336 (52%), Gaps = 8/336 (2%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+F CA K + ++ V V + N ++ YGKC L +A +F EM +RD
Sbjct: 359 VFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRD 418
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--EELELGVSKQL 165
SWNA++ A QN T+ +M SG+ + TY +VL++ A + LE G+ +
Sbjct: 419 SVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLV--V 476
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG +K G + + S++VD Y KC +T+A+++ D I + VSWN I+ + +
Sbjct: 477 HGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQS 536
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA F +ML ++P +FT+A L C+ L++ G QIHG IIK + GD+ + +L
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 596
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG + D+ + ++ + + +SW +++ GYA+ G+ EA E+F M NV+ +
Sbjct: 597 VDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNH 656
Query: 346 AMLAGYTRSL----LWKEALDFVFLMRKTTKDIDQV 377
A R+ L + + LM K + Q+
Sbjct: 657 ATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQL 692
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA + CA+ I +++ ++ ++ + ++ Y KCGN+ D+ +F++
Sbjct: 558 YATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAR 617
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ D SWNAM+ Y +G LE+F M + V N T+ VLR+
Sbjct: 618 KLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRA 665
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/620 (30%), Positives = 304/620 (49%), Gaps = 37/620 (5%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
I +AR+L + P +N + Y K NL AR LF+ M R+ SW M+G
Sbjct: 62 IAKARQLFDEM----PYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGG 117
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Y+QN P L+ +M SGV + IT+A +L + L Q+H I++ GF +
Sbjct: 118 YSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSAS 177
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+I+ +SLVD+Y K + A ++F ++ K++VS+NV++ Y G +EA+ +F +M
Sbjct: 178 LIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRN 237
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
D +P FTFA L G QIHG+ IK + D V +L + Y K
Sbjct: 238 MDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSK------ 291
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
I A+ LF+EMPE + +S+N ++ GY + +
Sbjct: 292 -------------------------HDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQY 326
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+++ D ++ T+ D +L+V A + MG++ H S + V NAL
Sbjct: 327 EKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNAL 386
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+DMY KC A F ++ R + V W A+++ Y ++G EEA+ F EM E
Sbjct: 387 VDMYAKCEKFEDANRIFANLAYR-NSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGD 445
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+ TF + L A AN++S+ GKQ+H VIR +V LV++Y C ++ AI VFK
Sbjct: 446 QATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFK 505
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
E +++ N++I + N F M + G+ PD ++F +L AC H G V+
Sbjct: 506 EMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEK 565
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
AL +F+SM Y + P+ +HY MI + CR G E E+ ++ MPF P M + + C
Sbjct: 566 ALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSC 625
Query: 657 RKNGYATLGEWAARRLNELN 676
R + L + AA +L +++
Sbjct: 626 RIHKNQDLAKKAADQLFKMD 645
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 216/453 (47%), Gaps = 33/453 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L + + E ++ S+++ F + + + N ++ Y K LD A LF EMP
Sbjct: 146 FATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMP 205
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D S+N M+ YT+ GF L+LF+ M + + T+A +L S ++ +Q
Sbjct: 206 TKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQ 265
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGL +K + ++ + ++L+D Y K + A+ +FD++ + VS+N+I+ Y G
Sbjct: 266 IHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQ 325
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+++ +F ++ NF FA L + + G Q H + + V +
Sbjct: 326 YEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNA 385
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC + EDA + RN + WT+I+S Y G EA ++F EM NV
Sbjct: 386 LVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHG- 444
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
DQ T L A L+ + +GK++H + R
Sbjct: 445 ------------------------------DQATFASTLKASANLASVSLGKQLHSSVIR 474
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
S++F + L+DMY CG+++ A F +M R+ V WNA+++ Y++ G +E +
Sbjct: 475 LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPD-RNIVCWNALISAYSQNGDAEATFS 533
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
SF++M + P +F ++L AC++ +E+
Sbjct: 534 SFADMIESGLYPDSVSFLSVLTACSHRGLVEKA 566
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 169/349 (48%), Gaps = 3/349 (0%)
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
F C F S + + I+K F+ + + V+ ++ AR L D+ RN
Sbjct: 20 FYCGF-SERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTS 78
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S +VSGY S + ARELF M RN +SW M+ GY+++ KEA + M ++
Sbjct: 79 SVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSG 138
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
D +T +L+ + +K ++H I R +S+++ V N+L+D Y K L A
Sbjct: 139 VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIAS 198
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANI 490
F +M +D VS+N ++TGY + G EEA+ F +M+ + +PS FTF +L
Sbjct: 199 QLFSEMPT-KDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGS 257
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+ G+QIH I+ Y ++ AL++ Y+K ++ A +F E LD + N +I
Sbjct: 258 EDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIII 317
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
G+ N + ++ ++F ++ + F +L E N+ + Q
Sbjct: 318 TGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQ 366
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 308/581 (53%), Gaps = 32/581 (5%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+WN L + G ++ F + S + + +T +L ++ +L + +Q+H L+
Sbjct: 861 AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALV 920
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K F V + +SL++ Y K V+ A + F + + +SWN ++ Y EA+
Sbjct: 921 IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAI 980
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F +LR+ ++P FT A+ L ACS EG+ LGS +Y
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACS-----------------TGDEGEYFTLGSQVHVY 1023
Query: 290 -VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
+KCG + D+ +S T+++ Y+ G++ EA L + + ++ SWNA++
Sbjct: 1024 AIKCGIINDS-----------FVS-TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIM 1071
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY +S ++AL+ LM + ID++TL + L +K GK++ + + ++
Sbjct: 1072 FGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN 1131
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++++VS+ +LDMY KCG++ +A F ++S R D+V+W +++GY G + A++ +
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGDEDHALSVYHL 1190
Query: 469 MQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M+ +P ++TF TL+ A + +++LEQGKQIH V++ Y ++ +LV++Y KC
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGS 1250
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ A RVF++ V+ N+M+LG + EAL +F M+ GI+PD +TF G+L A
Sbjct: 1251 VQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C H G A ++FD+M YGI P++EHY C++ R G ++E E+ + MPF +
Sbjct: 1311 CSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASAS 1370
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
M R + CR G A + A +L L+P + + +N
Sbjct: 1371 MYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 203/427 (47%), Gaps = 44/427 (10%)
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
+F P PV N + Y K G + A F PE D SWN M+ +Y QN +
Sbjct: 924 SFAPVVPVS--NSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981
Query: 130 LFLDMNHSGVSANQITYANVLR--SSAEELE-LGVSKQLHGLIVKRGFCGNVILESSLVD 186
F D+ G+ +Q T A+VLR S+ +E E + Q+H +K G + + ++L+D
Sbjct: 982 TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y K M +A + + + SWN I+ Y+ + ++A+ F M I T
Sbjct: 1042 LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEIT 1101
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR---GLLD 303
A A+ A L + +G QI IK+ F D V + +MY+KCG + +A G +
Sbjct: 1102 LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS 1161
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+PDE ++WT+++SGY +G AL
Sbjct: 1162 RPDE---VAWTTMISGYIENGD-------------------------------EDHALSV 1187
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
LMR + D+ T ++ + L+ ++ GK++H + + DYS + FV +L+DMY K
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCK 1247
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
CG+++ A F +M R+ V WNA+L G A+ G +EA+ F MQ +P K TF
Sbjct: 1248 CGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIG 1306
Query: 483 LLAACAN 489
+L+AC++
Sbjct: 1307 VLSACSH 1313
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 243/589 (41%), Gaps = 92/589 (15%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + Y K G + AR LFD+MPERD WN ML AY +N F L F +
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLI--VKRGFCGNVILESSLVDAYGKCMVM 194
SG + ++N LH +I V N + V AY
Sbjct: 812 SGFFPD---FSN----------------LHCVIGGVNSDVSNNRKRHAEQVKAY------ 846
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A +MF Q N +WN + +L AG A+ F +LR I + T L A
Sbjct: 847 --AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
G QIH ++IK F V SL MY K G + A E ++ISW
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++S YA + EA F + L+R K
Sbjct: 965 TMISSYAQNNLEMEAICTFRD------------------------------LLRDGLKP- 993
Query: 375 DQVTLGLILNVCAGLSE---IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
DQ TL +L C+ E +G +VH + + ++ FVS AL+D+Y K G + A
Sbjct: 994 DQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANI 490
+ D SWNA++ GY + +S +A+ FS M P + T T + A +
Sbjct: 1054 FLLHG-KYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+L+QGKQI + I+ + ++ ++++Y KC + A+ +F E S D + +MI
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHEGNVKLALQ 599
G+ N AL V+ LM+ G++PD TF ++ A IH VKL
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY- 1231
Query: 600 FFDSMRCKYGIIPQLEHY--ECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
L+H+ ++ +YC+ G +++ +M V
Sbjct: 1232 -------------SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 247/535 (46%), Gaps = 76/535 (14%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
++ + +VT P +L N I Y KCG+L AR +FD+ +RD +WN++L AY Q
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 121 NGFPGRTLE-------LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
F + E LF + G S ++T A +L+ + VS+ +HG VK G
Sbjct: 690 --FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F ++ + +LV+ Y K ++ AR +FD + ++AV WNV+++ Y+ EA+ F
Sbjct: 748 FELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFS 807
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI--IKIDFEGDDVVLGSLTEMYVK 291
R P F+N +H VI + D + + Y
Sbjct: 808 AFHRSGFFP---DFSN----------------LHCVIGGVNSDVSNNRKRHAEQVKAY-- 846
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
A + NI +W ++ + +G+I A + F
Sbjct: 847 ------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCF------------------ 882
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++LL ++T D VTL +IL+ G ++ +G+++H + ++ ++ +
Sbjct: 883 -KTLL------------RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVV 929
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
VSN+L++MY K G + +A F S D +SWN +++ YA+ EA+ +F ++
Sbjct: 930 PVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 472 E-TRPSKFTFETLLAACANISSLEQ---GKQIHCFVIRNCYEIN-VVCRGALVEVYTKCC 526
+ +P +FT ++L AC+ E G Q+H + I+ C IN AL+++Y+K
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK-CGIINDSFVSTALIDLYSKGG 1047
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
++ A + D+ N+++ G+ + + R+ALE F LM + GI D IT
Sbjct: 1048 KMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITL 1102
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 155/297 (52%), Gaps = 4/297 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y K G +D+A L + D SWNA++ Y ++ + LE F M+
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEM 1093
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ ++IT A +++S + L KQ+ +K GF ++ + S ++D Y KC M +A
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNA 1153
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F +I + V+W ++ Y+ G+ A+ ++ M ++P +TFA + A S L
Sbjct: 1154 LELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCL 1213
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G QIH ++K+D+ D V SL +MY KCG ++DA + + D R ++ W +++
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273
Query: 318 SGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
G A G + EA LF M + +++ +L+ + S L+ EA + M KT
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKT 1330
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
++++K+GK H I + + +++N L+ MY KCG+L SAR F S RD V+WN
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVF-DKSSDRDLVTWN 681
Query: 448 AVLTGYARRGQS--EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQG-----KQIH 500
++L YA+ S E + F + R F+ L A L G + +H
Sbjct: 682 SILAAYAQFADSSYENVLEGF-RLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVH 740
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ ++ +E+++ GALV +Y K + A +F + D ++ N M+ + N
Sbjct: 741 GYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQD 800
Query: 561 EALEVFGLMKKEGIKPDHITFHGIL 585
EAL F + G PD H ++
Sbjct: 801 EALRFFSAFHRSGFFPDFSNLHCVI 825
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+ +A L + + A+ + +++ +N+V + F+ ++ Y KCG++ DA
Sbjct: 1197 QPDEYT-FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEE 156
+F +M R WNAML Q+G L LF M +G+ +++T+ VL + S
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
L K + G + S LVDA G+ + +A + + K + S
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASAS 1370
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
++ L+ GK+ H ++ + + L+ +Y+KC L A +VF +SS D++ NS+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 550 ILGFCH-----NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ + E E +FGL+++ G +T +L C+ G V+++ +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS-ETVHGY 742
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
K G L ++ +YC+YG + + ++MP
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP 779
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/536 (32%), Positives = 280/536 (52%), Gaps = 35/536 (6%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
NV +SL+ Y K + DAR +F ++ ++ VSW V+V G EA+ MF M+
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+ + P FT N L +C+ + G ++H ++K+ V S+ MY KCG E
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
AR + ++ ER++ SW ++VS A GR+ A LF MP+R ++SWNA++AGY ++ L
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274
Query: 357 WKEALDFVF-LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+AL F ++ +T D+ T+ +L+ CA L + +GK+VH +I R+ V+N
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334
Query: 416 ALLDMYRKCGNLRSAR-------------IWF-------------------YQMSQRRDK 443
AL+ MY K G++ +AR I F + + RD
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
V+W A++ GY + G ++EAM F M + P+ +T +L+ CA+++ LE GKQIHC
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHNERGRE 561
IR+ E + ++V +Y + L +A RVF + + SMI+ + G +
Sbjct: 455 AIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED 514
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+ +F M + G+KPD ITF G+L AC H G V ++F ++ K+GI+P++ HY CM+
Sbjct: 515 AVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMV 574
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G E ++F+ +MP P + CR + A L E AA +L ++P
Sbjct: 575 DLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDP 630
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 243/457 (53%), Gaps = 35/457 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF N + Y K G L DAR +F EMPERD SW M+ + G G +++FLDM
Sbjct: 96 VFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVT 155
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC----- 191
G+S Q T NVL S A GV +++H +VK G V + +S+++ YGKC
Sbjct: 156 DGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAET 215
Query: 192 ------------------MVMTDAR--------RMFDDIQNKNAVSWNVIVRRYLVAGNG 225
MV DA +F+++ ++ VSWN ++ Y G
Sbjct: 216 ARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLN 275
Query: 226 KEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+A+ F +ML + P FT + L AC+ L G Q+H I++ V +
Sbjct: 276 AKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNA 335
Query: 285 LTEMYVKCGRLEDARGLLDQP--DERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
L MY K G +E+ARG++ Q + N+IS+T+++ GY G ++ ARE+F+ M R+V+
Sbjct: 336 LISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVV 395
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+W AM+ GY ++ EA++ LM ++ + + T+ +L+VCA L+ ++ GK++H
Sbjct: 396 AWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKA 455
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R+ + VSN+++ MY + G+L AR F ++ R++ V+W +++ A+ G E+A
Sbjct: 456 IRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDA 515
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ F EM + +P + TF +L+AC ++ +++GK+
Sbjct: 516 VGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKR 552
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 218/486 (44%), Gaps = 101/486 (20%)
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR-----LEDARGLL 302
A L C ++P G IH +K + +L Y +AR L
Sbjct: 27 ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 303 DQ--PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
D+ +RN+ +W S++S YA SGR+ +AR +F EMPER+ +SW M+ G R + EA
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+ M Q TL +L+ CA +G++VH F+ + SS + V+N++L+M
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNM 206
Query: 421 YRKCGNLRSARIWFYQMSQR------------------------------RDKVSWNAVL 450
Y KCG+ +AR F +M +R R VSWNAV+
Sbjct: 207 YGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVI 266
Query: 451 TGYARRGQSEEAMTSFSEM-QWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRN-- 506
GY + G + +A+ FS M + T P +FT ++L+ACAN+ + GKQ+H +++R+
Sbjct: 267 AGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRM 326
Query: 507 -------------------------------CYEINVVCRGALVEVYTKCCCLEYAIRVF 535
++NV+ AL+E Y K +++A +F
Sbjct: 327 PYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMF 386
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
S+ DV+ +MI+G+ N EA+E+F LM + G +P+ T +L C
Sbjct: 387 DVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVC-----AS 441
Query: 596 LA-LQFFDSMRCKYGIIPQLEHYE-----CMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
LA L++ + CK I L+ ++ +Y R G ++P
Sbjct: 442 LACLEYGKQIHCK--AIRSLQEQSSSVSNSIVTMYARSG----------------SLPWA 483
Query: 650 RKIFDK 655
R++FD+
Sbjct: 484 RRVFDR 489
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 199/487 (40%), Gaps = 111/487 (22%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L ++ CA+++A RK+ S +V + V + N + YGKCG+ + AR
Sbjct: 160 PTQFTL-TNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARA 218
Query: 99 LFDEMPERDGGSWNAM-------------------------------LGAYTQNGFPGRT 127
+F+ MPER SWNAM + Y QNG +
Sbjct: 219 VFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKA 278
Query: 128 LELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK--------------- 171
L F M ++S ++ ++ T +VL + A + + KQ+H I++
Sbjct: 279 LWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALIS 338
Query: 172 -----------RGFCG-------NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
RG NVI ++L++ Y K M AR MFD + N++ V+W
Sbjct: 339 MYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWT 398
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y G+ EA+ +F M+R P ++T A L C+ L+ G QIH I+
Sbjct: 399 AMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN-IISWTSIVSGYAISGRIREAREL 332
E V S+ MY + G L AR + D+ R ++WTS++ A G +A L
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGL 518
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F EM +R K D++T +L+ C + +
Sbjct: 519 FEEM------------------------------LRVGVKP-DRITFVGVLSACTHVGFV 547
Query: 393 KMGK-------EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
GK + HG + + + ++D+ + G A+ + QM D ++
Sbjct: 548 DEGKRYFQQLQDKHGIVPEMSHYA------CMVDLLARAGLFSEAQEFIQQMPVEPDAIA 601
Query: 446 WNAVLTG 452
W ++L+
Sbjct: 602 WGSLLSA 608
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 308/581 (53%), Gaps = 32/581 (5%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+WN L + G ++ F + S + + +T +L ++ +L + +Q+H L+
Sbjct: 861 AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALV 920
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K F V + +SL++ Y K V+ A + F + + +SWN ++ Y EA+
Sbjct: 921 IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAI 980
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F +LR+ ++P FT A+ L ACS EG+ LGS +Y
Sbjct: 981 CTFRDLLRDGLKPDQFTLASVLRACS-----------------TGDEGEYFTLGSQVHVY 1023
Query: 290 -VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
+KCG + D+ +S T+++ Y+ G++ EA L + + ++ SWNA++
Sbjct: 1024 AIKCGIINDS-----------FVS-TALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIM 1071
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY +S ++AL+ LM + ID++TL + L +K GK++ + + ++
Sbjct: 1072 FGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFN 1131
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++++VS+ +LDMY KCG++ +A F ++S R D+V+W +++GY G + A++ +
Sbjct: 1132 NDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGDEDHALSVYHL 1190
Query: 469 MQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M+ +P ++TF TL+ A + +++LEQGKQIH V++ Y ++ +LV++Y KC
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGS 1250
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ A RVF++ V+ N+M+LG + EAL +F M+ GI+PD +TF G+L A
Sbjct: 1251 VQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSA 1310
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C H G A ++FD+M YGI P++EHY C++ R G ++E E+ + MPF +
Sbjct: 1311 CSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASAS 1370
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
M R + CR G A + A +L L+P + + +N
Sbjct: 1371 MYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 243/589 (41%), Gaps = 92/589 (15%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + Y K G + AR LFD+MPERD WN ML AY +N F L F +
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHR 811
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLI--VKRGFCGNVILESSLVDAYGKCMVM 194
SG + ++N LH +I V N + V AY
Sbjct: 812 SGFXPD---FSN----------------LHCVIGGVNSDVSNNRKRHAEQVKAY------ 846
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A +MF Q N +WN + +L AG A+ F +LR I + T L A
Sbjct: 847 --AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
G QIH ++IK F V SL MY K G + A E ++ISW
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++S YA + EA F + L+R K
Sbjct: 965 TMISSYAQNNLEMEAICTFRD------------------------------LLRDGLKP- 993
Query: 375 DQVTLGLILNVCAGLSE---IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
DQ TL +L C+ E +G +VH + + ++ FVS AL+D+Y K G + A
Sbjct: 994 DQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE 1053
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANI 490
+ D SWNA++ GY + +S +A+ FS M P + T T + A +
Sbjct: 1054 FLLHG-KYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+L+QGKQI + I+ + ++ ++++Y KC + A+ +F E S D + +MI
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHEGNVKLALQ 599
G+ N AL V+ LM+ G++PD TF ++ A IH VKL
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY- 1231
Query: 600 FFDSMRCKYGIIPQLEHY--ECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
L+H+ ++ +YC+ G +++ +M V
Sbjct: 1232 -------------SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 247/535 (46%), Gaps = 76/535 (14%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
++ + +VT P +L N I Y KCG+L AR +FD+ +RD +WN++L AY Q
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 121 NGFPGRTLE-------LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
F + E LF + G S ++T A +L+ + VS+ +HG VK G
Sbjct: 690 --FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F ++ + +LV+ Y K ++ AR +FD + ++AV WNV+++ Y+ EA+ F
Sbjct: 748 FELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFS 807
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI--IKIDFEGDDVVLGSLTEMYVK 291
R P F+N +H VI + D + + Y
Sbjct: 808 AFHRSGFXP---DFSN----------------LHCVIGGVNSDVSNNRKRHAEQVKAY-- 846
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
A + NI +W ++ + +G+I A + F
Sbjct: 847 ------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCF------------------ 882
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++LL ++T D VTL +IL+ G ++ +G+++H + ++ ++ +
Sbjct: 883 -KTLL------------RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVV 929
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
VSN+L++MY K G + +A F S D +SWN +++ YA+ EA+ +F ++
Sbjct: 930 PVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 472 E-TRPSKFTFETLLAACANISSLEQ---GKQIHCFVIRNCYEIN-VVCRGALVEVYTKCC 526
+ +P +FT ++L AC+ E G Q+H + I+ C IN AL+++Y+K
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIK-CGIINDSFVSTALIDLYSKGG 1047
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
++ A + D+ N+++ G+ + + R+ALE F LM + GI D IT
Sbjct: 1048 KMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITL 1102
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 155/297 (52%), Gaps = 4/297 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y K G +D+A L + D SWNA++ Y ++ + LE F M+
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEM 1093
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ ++IT A +++S + L KQ+ +K GF ++ + S ++D Y KC M +A
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNA 1153
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F +I + V+W ++ Y+ G+ A+ ++ M ++P +TFA + A S L
Sbjct: 1154 LELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCL 1213
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G QIH ++K+D+ D V SL +MY KCG ++DA + + D R ++ W +++
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273
Query: 318 SGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
G A G + EA LF M + +++ +L+ + S L+ EA + M KT
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKT 1330
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
++++K+GK H I + + +++N L+ MY KCG+L SAR F S RD V+WN
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVF-DKSSDRDLVTWN 681
Query: 448 AVLTGYARRGQS--EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQG-----KQIH 500
++L YA+ S E + F + R F+ L A L G + +H
Sbjct: 682 SILAAYAQFADSSYENVLEGF-RLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVH 740
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ ++ +E+++ GALV +Y K + A +F + D ++ N M+ + N
Sbjct: 741 GYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQD 800
Query: 561 EALEVFGLMKKEGIKPDHITFHGIL 585
EAL F + G PD H ++
Sbjct: 801 EALRFFSAFHRSGFXPDFSNLHCVI 825
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+ +A L + + A+ + +++ +N+V + F+ ++ Y KCG++ DA
Sbjct: 1197 QPDEYT-FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEE 156
+F +M R WNAML Q+G L LF M +G+ +++T+ VL + S
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
L K + G + S LVDA G+ + +A + + K + S
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASAS 1370
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/635 (29%), Positives = 313/635 (49%), Gaps = 81/635 (12%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGV 161
MPER+ SW++++ Y++ GF L +FLD + N+ A+V+ S+ ++ +
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVI-SACVQVGGSI 59
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
KQ+HG VK GF NV + +SLVD Y K + +AR +FD + K+AV+W I+ +
Sbjct: 60 DKQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVK 119
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G + ++ +F +M ++ P + ++ L ACS L G QIHG +++ E D
Sbjct: 120 RGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ L + Y K SG+++ AR+LF+ M +RNV
Sbjct: 180 VNVLIDFYTK-------------------------------SGKVQSARKLFDGMADRNV 208
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
ISW AM+AGY ++ +EA+ M + + D IL C L +++G++VH +
Sbjct: 209 ISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAY 268
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + S+IF+ N L+DMY KCG+L AR F M+ R + VS+NA++ GY+ Q E
Sbjct: 269 SIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIR-NVVSYNALIEGYSTLEQLSE 327
Query: 462 AMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
AM F EM+ PS TF +LL A A +S+LE GKQIH + + + + AL++
Sbjct: 328 AMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAGSALID 387
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
Y+KC CL A VF + + D+++ N+M+ G+ EAL+++ ++ KP+ +T
Sbjct: 388 FYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVT 447
Query: 581 FHGILLAC-----------IHE----------------------------------GNVK 595
F + A H G+VK
Sbjct: 448 FAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAFGHVK 507
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
L +F+SM K+ I P EHY C++ L R G + E ++F+ +MP P + R +
Sbjct: 508 DGLHYFESMP-KFSIKPGTEHYACVVSLLGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSA 566
Query: 656 CRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR +G LG++AA + ++ + + +N +
Sbjct: 567 CRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIY 601
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 156/314 (49%), Gaps = 15/314 (4%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S +A+ R++ + + +FL N I+ Y KCG+L+DAR +FD+M R+ S+
Sbjct: 253 CGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSY 312
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA++ Y+ + LF +M H +S + +T+ ++L +SA L + KQ+H LI K
Sbjct: 313 NALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITK 372
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + S+L+D Y KC + DAR +FD + K+ V WN ++ Y +EA+ +
Sbjct: 373 FGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKL 432
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ ++ + +P TFA A S L+S G Q H IIK + SL +MY K
Sbjct: 433 YTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAK 492
Query: 292 CGRLEDARGLLDQPDE--------------RNIISWTSIVSGYAISGRIREARELFNEMP 337
CG LEDAR + + +VS SG++ EA+E +MP
Sbjct: 493 CGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLYEAKEFIEKMP 552
Query: 338 -ERNVISWNAMLAG 350
E + W ++L+
Sbjct: 553 TEPEAVVWRSLLSA 566
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S+ + L A+ A+ +++ + + F + +F + I+ Y KC L DAR +F
Sbjct: 343 SFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVF 402
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D+M E+D WNAML YTQ L+L+ ++ S N +T+A + +++ L
Sbjct: 403 DKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQ 462
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+Q H I+K G + +SL+D Y KC + DAR+ F +++
Sbjct: 463 HGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAFGHVKD 508
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 332/647 (51%), Gaps = 48/647 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDAR 97
P + S Y L Q A K++ + + L ++++ Y + +L N I+ Y KCG+L A+
Sbjct: 5 PQNRSFYNLLIQY-ADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAK 63
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGR--TLELFLDMNHSGVSANQITYANVLRSSAE 155
+F+ + ++ S+N ++ + NG G LELF M + + + T+ V ++A
Sbjct: 64 LVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA- 122
Query: 156 ELELGV---SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
L LG ++Q+H L +K +V + SSLV+ Y K + +AR++FD + +N VSW
Sbjct: 123 -LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181
Query: 213 NVIVRRYLVAGNGKEAVVMF--FKMLREDIRPLNFTFANALFAC-SFLSSPYEGMQIHGV 269
++ Y KEA+ +F +++ ++ FT + C F+ S G Q+H V
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDS---GKQVHCV 238
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
++K VL +L MY KCG L Y++
Sbjct: 239 VVKNGVLEFVSVLNALVTMYAKCGNLN-----------------------YSLM------ 269
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
LF ++N I+W+A++ GY+++ +AL M + TL +L C+ +
Sbjct: 270 --LFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDV 327
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ I+ GK+ HG++ ++ Y + I+ + AL+DMY K G AR F D V W ++
Sbjct: 328 AAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGF-DFLLEPDLVLWTSI 386
Query: 450 LTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ GY + G++EEA++ + MQ + P++ T ++L AC+N+++LEQGKQIH I+
Sbjct: 387 IAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGL 446
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ R AL +Y KC LE + +F+ D++ N+MI G N GREALE+F
Sbjct: 447 GPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEE 506
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M+ EG KPDHITF +L AC H G VK +F+ M ++ ++P++EHY CM+ + R G
Sbjct: 507 MRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAG 566
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ E ++F+ + + + R + CR + LG +A +L EL
Sbjct: 567 KLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMEL 613
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 191/661 (28%), Positives = 314/661 (47%), Gaps = 59/661 (8%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ C ++I A+ L S+++ +F+LN I Y KC ++ DAR +FDEMP R+
Sbjct: 10 FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGV-SANQITYANVLRSSAEELELGVSKQLHG 167
SW M+ T + P L L+ +M S + NQ Y+ VL++ + + K +H
Sbjct: 70 VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHY 129
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I + +++L ++L+D Y KC + DA+R+F +I KNA SWN ++ Y G +
Sbjct: 130 HIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDD 189
Query: 228 AVVMFFKMLREDIRPLN------------------------------FTFANALFACSFL 257
A+ +F KM DI N FTF + L AC
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCS 249
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +IH IIK FE + +L +MY C L +A + DQ
Sbjct: 250 DELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQ------------- 296
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
Y + + E+ L WN+ML+G+ + + EAL + M ++ D
Sbjct: 297 --YFRNSSVSESLAL-----------WNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFY 343
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T ++L +C + + +VHGF+ + Y + V + L+D+Y K G++ +A F ++
Sbjct: 344 TFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERL 403
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ D V+W++++TG AR G + A + F +M + F +L AC++++S + G
Sbjct: 404 PDK-DVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHG 462
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
KQ+H ++ YE V AL+++Y KC +E A+ +F S +D + S+I+G N
Sbjct: 463 KQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQN 522
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
R EA+ + M + G KP+ IT G+L AC H G V+ A F+S+ +G+IP EH
Sbjct: 523 GRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEH 582
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ + + G +E ++ MPF P + + C L A L +
Sbjct: 583 YNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATS 642
Query: 677 P 677
P
Sbjct: 643 P 643
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 167/338 (49%), Gaps = 13/338 (3%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
LK DE + + + C S ++ R++ ++ + ++ I+ Y C L
Sbjct: 232 LKMDEFT----FPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLL 287
Query: 94 DDARGLFDEMPERDGGS-----WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+A +FD+ S WN+ML + NG L + M+ SGV + T++
Sbjct: 288 SEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSI 347
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
VL+ L ++ Q+HG ++ G+ + ++ S L+D Y K + +A R+F+ + +K+
Sbjct: 348 VLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKD 407
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V+W+ ++ G+ K A +F M+ ++ +F + L ACS L+S G Q+H
Sbjct: 408 VVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHS 467
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+ +K +E + VV +L +MY KCG +EDA L E + +SWTSI+ G A +GR E
Sbjct: 468 LCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEE 527
Query: 329 ARELFNEMPER----NVISWNAMLAGYTRSLLWKEALD 362
A L ++M E N I+ +L S L +EA D
Sbjct: 528 AISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWD 565
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 325/618 (52%), Gaps = 45/618 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ + K G++ A+ +F +M R+ S N ++ + +ELF++M S V N
Sbjct: 326 VSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNP 384
Query: 144 ITYANVLRSSAE--ELELGVSK--QLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDAR 198
+Y +L + E LE G K ++H +++ G + + + L++ Y KC + DA
Sbjct: 385 NSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDAC 444
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+F + NK++V+WN ++ EAV F +M R ++ P NFT +AL +C+ L
Sbjct: 445 VVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLG 504
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+H +K+ + D V +L +Y +CG
Sbjct: 505 WISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY------------------------ 540
Query: 319 GYAISGRIREARELFNEMPERNVISWNAM---LAGYTRSLLWKEALDFVFLMRKTTKDID 375
++E ++ F+ M + + +SWN++ LA S+L EA++ +M + D +
Sbjct: 541 -------VKECQKAFSLMLDYDHVSWNSLIGALADSEPSML--EAVESFLVMMRAGWDPN 591
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+VT IL + LS ++GK++H + + + +++ + NALL Y KCG++ F
Sbjct: 592 RVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFS 651
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAM-TSFSEMQWETRPSKFTFETLLAACANISSLE 494
+MS R+D+VSWN++++GY +AM + MQ R FTF T+L+ACA +++LE
Sbjct: 652 RMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLE 711
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G ++H +R C E ++V ALV++Y KC ++YA R F+ + ++ NSMI G+
Sbjct: 712 RGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYA 771
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G ++L++F MK +G PDH+TF G+L AC H G V FDSM YG+ P++
Sbjct: 772 RHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRM 831
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEWAARRL 672
EH+ CM+ L R G + ++EDF+N+MP P V + R + CR NG T LG AA L
Sbjct: 832 EHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEML 891
Query: 673 NELNPWAPFQFKITTNRF 690
E+ P + + +N +
Sbjct: 892 LEMEPTNAVNYILLSNMY 909
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 280/579 (48%), Gaps = 48/579 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL N I Y + G+L R +FDEMP R+ SW+ ++ YT+N P ELF M
Sbjct: 108 LFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVS 167
Query: 137 SGVSANQITYANVLRSSAE--ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G N + +V+R+ E E L Q+HGL+ K + +V + L+ YG + M
Sbjct: 168 DGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGM 227
Query: 195 TD-ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE----DIRPLNFTFAN 249
D ARR FD I +N VS N ++ Y G+ A +F M +E ++P +TF +
Sbjct: 228 VDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGS 287
Query: 250 ALFA-CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+ A CS +S V+L L K G L D
Sbjct: 288 LISATCSLANSGL------------------VLLEQLLTRVEKSGFLHD----------- 318
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ +++VSG+A +G I A+ +F +M RNV+S N ++ G R +EA++ +F+
Sbjct: 319 -LYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVE-LFMEM 376
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGK----EVHGFIHRNDY-SSNIFVSNALLDMYRK 423
K + +++ + +IL ++ GK EVH F+ R+ ++ I + N L++MY K
Sbjct: 377 KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAK 436
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFET 482
CG + A + F M + D V+WN+++TG + Q EA+ +F EM+ E PS FT +
Sbjct: 437 CGAINDACVVFRLMDNK-DSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMIS 495
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
L++CA++ + G+Q+HC ++ +++V AL+ +Y +C ++ + F D
Sbjct: 496 ALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYD 555
Query: 543 VIICNSMILGFCHNERGR-EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+ NS+I +E EA+E F +M + G P+ +TF IL A +L Q
Sbjct: 556 HVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQ-I 614
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
++ K + ++ Y + G M E+ +RM
Sbjct: 615 HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRM 653
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 205/419 (48%), Gaps = 35/419 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y KCG ++DA +F M +D +WN+M+ QN ++ F +M + +
Sbjct: 428 NGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELY 487
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T + L S A + V +QLH +K G +V + ++L+ YG+C + + ++
Sbjct: 488 PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKA 547
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGK-EAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
F + + + VSWN ++ + EAV F M+R P TF L A S LS
Sbjct: 548 FSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSL 607
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
G QIH +++K + D + +L Y KCG + + + D ++ +SW S++S
Sbjct: 608 HELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMIS 667
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY + NE L +A+D V+ M + + +D T
Sbjct: 668 GY-----------IHNE--------------------LLPKAMDMVWFMMQKGQRLDGFT 696
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L+ CA ++ ++ G EVHG R S+I + +AL+DMY KCG + A F++M
Sbjct: 697 FATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYAS-RFFEMM 755
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
R+ SWN++++GYAR G +++ F++M+ + P TF +L+AC++ + +G
Sbjct: 756 PARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEG 814
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 226/484 (46%), Gaps = 41/484 (8%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+++LH + K GF ++ L ++L++ Y + + R++FD++ +N VSW+ ++ Y
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS--SPYEGMQIHGVIIKIDFEGDD 279
EA +F KM+ + P ++ F + + AC GMQIHG++ K + D
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 280 VVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
L MY G ++ AR D RN++S S++S Y G A ++F+ M +
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM-Q 270
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+ V+ YT F L+ T + GL+L L ++ E
Sbjct: 271 KEVMGDGLKPNEYT----------FGSLISATCSLANS---GLVL-----LEQLLTRVEK 312
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
GF+H +++V +AL+ + K G++ A+ F +MS R+ VS N ++ G R+ +
Sbjct: 313 SGFLH------DLYVGSALVSGFAKAGSIGYAKNIFQKMSY-RNVVSLNGLIIGLVRQKR 365
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGK----QIHCFVIRN-CYEINVV 513
EEA+ F EM+ + ++ +L A LE GK ++H F+IR+ +
Sbjct: 366 GEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIA 425
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L+ +Y KC + A VF+ + D + NSMI G N++ EA++ F M++
Sbjct: 426 IGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE 485
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYM 630
+ P + T L +C G + + Q + C K G+ + ++ LY GY+
Sbjct: 486 LYPSNFTMISALSSCASLGWISVGEQ----LHCEGLKLGLDLDVSVSNALLALYGECGYV 541
Query: 631 KELE 634
KE +
Sbjct: 542 KECQ 545
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 31/336 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + CYGKCG++ +F M +R D SWN+M+ Y N + +++ M G
Sbjct: 631 NALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQ 690
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ T+A VL + A L ++HG V+ ++++ S+LVD Y KC + A R
Sbjct: 691 RLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASR 750
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
F+ + +N SWN ++ Y G+G +++ +F +M + P + TF L ACS
Sbjct: 751 FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGL 810
Query: 260 PYEGM-------QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNII 311
EG +I+G+ +++ + ++ + G L L+Q P + N++
Sbjct: 811 VNEGFSHFDSMSEIYGLAPRMEH------FSCMVDLLGRVGELNKMEDFLNQMPVKPNVL 864
Query: 312 SWTSIVSGYA-ISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
W +++ +GR R A E+ EM N +++ + Y W +
Sbjct: 865 IWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVA 924
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
MRK + AG S + M VH F+
Sbjct: 925 MRKA-----------FVKKEAGCSWVTMKDGVHVFV 949
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 12/266 (4%)
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
K +E+H + +N + +++F+ N L+++Y + G+L S R F +M R+ VSW+ +++G
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMP-LRNLVSWSCLISG 148
Query: 453 YARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANIS--SLEQGKQIHCFVIRNCYE 509
Y R EA F +M + P+ + F +++ AC L+ G QIH + + Y
Sbjct: 149 YTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYV 208
Query: 510 INVVCRGALVEVYTKCCCL-EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+V L+ +Y + +YA R F +++ NSMI +C A ++F
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268
Query: 569 MKKE----GIKPDHITFHGILLACIHEGNVKLAL--QFFDSMRCKYGIIPQLEHYECMIK 622
M+KE G+KP+ TF ++ A N L L Q + K G + L ++
Sbjct: 269 MQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVE-KSGFLHDLYVGSALVS 327
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPM 648
+ + G + ++ +M + V +
Sbjct: 328 GFAKAGSIGYAKNIFQKMSYRNVVSL 353
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 302/588 (51%), Gaps = 48/588 (8%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ A + G P + LEL+ +M G+ A++ +++ + + L ++LH ++ G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F ++ LE++L+ Y KC + DA+R+F+ ++ K+ +W+ I+ Y AG G+ AVV++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M+ E + P TFA AL C+ ++ +G IH I+ DDV+ SL MY+KC
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC- 179
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
DE + EAR++F M RNV S+ AM++ Y +
Sbjct: 180 ------------DE------------------MVEARKVFEGMKARNVRSYTAMISAYVQ 209
Query: 354 SLLWKEALDFVFLMRKTTK-DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ EAL+ M K + + T IL GL ++ G++VH + + +N+
Sbjct: 210 AGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVV 269
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
V NAL+ MY KCG+ AR F M+ R + +SW +++ YA+ G +EA+ F M E
Sbjct: 270 VQNALVTMYGKCGSPVEARKVFDSMTAR-NVISWTSMIAAYAQHGNPQEALNLFKRMDVE 328
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC---RGALVEVYTKCCCLE 529
PS +F + L ACA + +L++G++IH V+ E N+ +L+ +Y +C L+
Sbjct: 329 --PSGVSFSSALNACALLGALDEGREIHHRVV----EANLASPQMETSLLSMYARCGSLD 382
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A RVF + D CN+MI F + R ++AL ++ M++EGI D ITF +L+AC
Sbjct: 383 DARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACS 442
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H V F S+ +G++P +EHY CM+ + R G + + E+ V MP+
Sbjct: 443 HTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAW 502
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN------RFD 691
+ C+++G GE AAR++ EL P + +N RFD
Sbjct: 503 MTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFD 550
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 223/448 (49%), Gaps = 42/448 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C +A+ E R+L +L+ + L ++ Y KCG+LDDA+ +F+ M +D
Sbjct: 36 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 95
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W++++ AY + G + L+ M GV N +T+A L A L + +H
Sbjct: 96 LFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 155
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+ + +L+ SL++ Y KC M +AR++F+ ++ +N S+ ++ Y+ AG E
Sbjct: 156 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 215
Query: 228 AVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A+ +F +M + E I P +TFA L A L + +G ++H + F+ + VV +L
Sbjct: 216 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 275
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY KCG +AR + D RN+ISWTS+++ YA G +EA LF M
Sbjct: 276 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---------- 325
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQ--VTLGLILNVCAGLSEIKMGKEVHGFIHR 404
D++ V+ LN CA L + G+E+H +
Sbjct: 326 --------------------------DVEPSGVSFSSALNACALLGALDEGREIHHRVVE 359
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +S + +LL MY +CG+L AR F +M + RD S NA++ + + G+ ++A+
Sbjct: 360 ANLASPQ-METSLLSMYARCGSLDDARRVFNRM-KTRDAFSCNAMIAAFTQHGRKKQALR 417
Query: 465 SFSEMQWETRPSK-FTFETLLAACANIS 491
+ +M+ E P+ TF ++L AC++ S
Sbjct: 418 IYRKMEQEGIPADGITFVSVLVACSHTS 445
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP S ++ CA A+ E R++ +V P + + Y +CG+LDDAR
Sbjct: 328 EPSGVS-FSSALNACALLGALDEGREIHHRVVEANLASPQ-METSLLSMYARCGSLDDAR 385
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEE 156
+F+ M RD S NAM+ A+TQ+G + L ++ M G+ A+ IT+ +VL + S
Sbjct: 386 RVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTS 445
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVI 215
L L L++ G V +VD G+ + DA + + + +AV+W +
Sbjct: 446 LVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTL 505
Query: 216 V---RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+ +R+ G+ A F++ + P + F + ++A +
Sbjct: 506 LSGCKRHGDLDRGERAARKVFELAPAETLP--YVFLSNMYAAA 546
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 322/644 (50%), Gaps = 29/644 (4%)
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
P L + Y CG D A + + + WN ++ + + G + + M
Sbjct: 50 PRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRML 109
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+G + T +VL++ E HGLI GF NV + ++LV Y +C +
Sbjct: 110 RAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 169
Query: 196 DARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLN-----FT 246
+A +FD+I + + +SWN IV ++ + N A+ +F KM L +P N +
Sbjct: 170 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 229
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
N L AC L + + ++HG I+ D V +L + Y KCG +E+A + + +
Sbjct: 230 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 289
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALD 362
++++SW ++V+GY+ SG + A ELF M + N+ ++W A++AGY++ EAL+
Sbjct: 290 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-------DYSS---NIF 412
M + + VT+ +L+ CA L G E+H + +N D+ ++
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 409
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V NAL+DMY KC + ++AR F + + R+ V+W ++ G+A+ G S +A+ F EM
Sbjct: 410 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 469
Query: 472 E---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YEINV-VCRGALVEVYTKCC 526
E P+ +T +L ACA+++++ GKQIH +V+R+ Y+ + L+ +Y+KC
Sbjct: 470 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 529
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
++ A VF S I SM+ G+ + RG EAL++F M+K G PD ITF +L
Sbjct: 530 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 589
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G V L +FDSM YG+ P+ EHY I L R+G + + V MP PT
Sbjct: 590 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTA 649
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + CR + L E A +L E+N + + +N +
Sbjct: 650 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 693
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 53/342 (15%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
++ C S KA+ + +++ N + VF+ N I+ Y KCG +++A +F+ M +
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELF---------LDM---------------NH------ 136
D SWNAM+ Y+Q+G ELF LDM +H
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351
Query: 137 -----SGVSANQITYANVLRSSAEELELGVSKQLHG-------LIVKRGFCG---NVILE 181
SG N +T +VL + A ++H L + F G ++++
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411
Query: 182 SSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE- 238
++L+D Y KC AR +FDDI + +N V+W V++ + G+ +A+ +F +M+ E
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 471
Query: 239 -DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD---VVLGSLTEMYVKCGR 294
+ P +T + L AC+ L++ G QIH +++ + D V L MY KCG
Sbjct: 472 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR-HHQYDSSAYFVANCLINMYSKCGD 530
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
++ AR + D +++ ISWTS+++GY + GR EA ++F++M
Sbjct: 531 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM 572
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTF--YPTPPVFLLNRAIECYGKCGNLDDA 96
P +Y++ + CA AI +++ + ++ Y + F+ N I Y KCG++D A
Sbjct: 476 PNAYTISC-ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTA 534
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
R +FD M ++ SW +M+ Y +G L++F M +G + IT+ VL
Sbjct: 535 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 588
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 204/677 (30%), Positives = 335/677 (49%), Gaps = 76/677 (11%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
YGKCG++ DA +FD+M ER +WNAM+G Y NG LE++ +M H GVS + T+
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+L++ +L ++HGL +K G V + +SLV Y KC + AR++FD +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 207 KN-AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N VSWN I+ Y G EA+ +F +ML+ + +TFA AL AC S GMQ
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 266 IHGVIIKI------------------------------DFEGDDVVL-GSLTEMYVKCGR 294
IH I+K + EG D+V S+ +++ G
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 295 LEDARGLLD-------QPDERNIISW--TSIVSGYAISGRIREAREL------------- 332
+A +PD+ +IIS S GY ++G+ A +
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNT 301
Query: 333 -----------------FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
F+ M +++ISW AGY ++ + +AL+ + ++ D+D
Sbjct: 302 LIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVD 361
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+G IL C GL+ + KE+HG+ R S + + N ++D+Y +CG + A + +
Sbjct: 362 ATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYA-VRIF 419
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSL 493
+ + +D VSW ++++ Y G + +A+ FS M+ ET P T ++L+A ++S+L
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK-ETGLEPDYVTLVSILSAVCSLSTL 478
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
++GK+IH F+IR + + LV++Y +C +E A ++F + + ++I+ +MI +
Sbjct: 479 KKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAY 538
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G A+E+F MK E I PDHITF +L AC H G V F + M+C+Y + P
Sbjct: 539 GMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPW 598
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY C++ L R ++E V M PT + + CR + +GE AA +L
Sbjct: 599 PEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLL 658
Query: 674 ELNPWAPFQFKITTNRF 690
EL+ P + + +N F
Sbjct: 659 ELDLDNPGNYVLVSNVF 675
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 250/539 (46%), Gaps = 45/539 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
LK+ + +A Q C S I ++ + ++ V++ N + Y + G +
Sbjct: 152 LKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKM 211
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+A +F + +D +WN+ML + QNG LE F D+ ++ + +Q++ +++ +S
Sbjct: 212 PEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVAS 271
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
L K++H +K GF N+++ ++L+D Y KC M+ R FD + +K+ +SW
Sbjct: 272 GRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWT 331
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
Y +A+ + ++ E + + L AC L+ + +IHG I+
Sbjct: 332 TAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRG 391
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D V+ ++ ++Y +CG ++ A + + + ++++SWTS++S Y +G +A E+F
Sbjct: 392 GLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF 450
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+ M E T + D VTL IL+ LS +K
Sbjct: 451 SSMKE-------------------------------TGLEPDYVTLVSILSAVCSLSTLK 479
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
GKE+HGFI R + +SN L+DMY +CG++ A F ++ R+ + W A+++ Y
Sbjct: 480 KGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIF-TCTKNRNLILWTAMISAY 538
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YEI- 510
G E A+ F M+ E P TF LL AC++ + +GK I C Y++
Sbjct: 539 GMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSF--LEIMKCEYQLE 596
Query: 511 ----NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ C LV++ + CLE A ++ K + +LG C +E EV
Sbjct: 597 PWPEHYTC---LVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEV 652
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 145/301 (48%), Gaps = 32/301 (10%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + DA + D+ ER+I +W +++ GY +G A E++ E
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYRE------------ 48
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
MR D T ++L C + ++ G E+HG +
Sbjct: 49 -------------------MRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGC 89
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S +FV N+L+ +Y KC ++ AR F +M R D VSWN++++ Y+ G EA+ FS
Sbjct: 90 DSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFS 149
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EM + + +TF L AC + S ++ G QIH ++++ ++V ALV +Y +
Sbjct: 150 EMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFG 209
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
+ A +F D++ NSM+ GF N EALE F ++ +KPD ++ I++
Sbjct: 210 KMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIV 269
Query: 587 A 587
A
Sbjct: 270 A 270
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
MY KCG++ A + F +MS+R +WNA++ GY G++ A+ + EM+ +
Sbjct: 1 MYGKCGSVLDAEMIFDKMSER-SIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY 59
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF-KE 537
TF LL AC + L G +IH I+ + V +LV +Y KC + A ++F +
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
DV+ NS+I + N EAL +F M K G+ + TF L AC +KL
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+Q ++ K G + + ++ +Y R+G M E
Sbjct: 180 MQIHAAIL-KSGRVLDVYVANALVAMYVRFGKMPE 213
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 278/516 (53%), Gaps = 4/516 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ AY K ++++ F+ + +++ V+WNV++ Y ++G AV + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 237 REDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
R+ L T L S G QIHG +IK+ FE +V L MY G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
DA+ + D+RN + + S++ G G I +A +LF M E++ +SW AM+ G ++
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNG 249
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L KEA++ M+ +DQ G +L C GL I GK++H I R ++ +I+V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KC L A+ F +M Q+ + VSW A++ GY + G++EEA+ F +MQ
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P +T ++ACAN+SSLE+G Q H I + V +LV +Y KC ++ + R+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E + D + +M+ + R E +++F M + G+KPD +T G++ AC G V
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ ++F M +YGI+P + HY CMI L+ R G ++E F+N MPF P +
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR G +G+WAA L EL+P P + + ++ +
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 158/605 (26%), Positives = 279/605 (46%), Gaps = 104/605 (17%)
Query: 27 TKTISGHLKSDEPVSYS-LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE 85
K I G++ P + LY ++ A K+ AR++ + P P +F N +
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLL 80
Query: 86 CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN--Q 143
Y K G + + F+++P+RDG +WN ++ Y+ +G G ++ + M SAN +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTR 139
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF-- 201
+T +L+ S+ + + KQ+HG ++K GF +++ S L+ Y ++DA+++F
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 202 -----------------------DDIQ-----NKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
D +Q K++VSW +++ G KEA+ F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M + ++ + F + L AC L + EG QIH II+ +F+ V +L +MY KC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
L A+ + D+ ++N++SWT++V GY +GR EA ++F
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF-------------------- 359
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
LD M+++ D D TLG ++ CA +S ++ G + HG + + V
Sbjct: 360 -------LD----MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWE 472
SN+L+ +Y KCG++ + F +M+ RD VSW A+++ YA+ G++ E + F +M Q
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+P T +++AC+ +E+G++ Y K EY I
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQR-----------------------YFKLMTSEYGI 504
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
S+ C MI F + R EA+ M PD I + +L AC ++G
Sbjct: 505 -----VPSIGHYSC--MIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKG 554
Query: 593 NVKLA 597
N+++
Sbjct: 555 NLEIG 559
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 202/412 (49%), Gaps = 32/412 (7%)
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IHG II+ + + ++ Y AR + D+ + N+ SW +++ Y+ +G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILN 384
I E F ++P+R+ ++WN ++ GY+ S L A+ + +MR + ++ +VTL +L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR---- 440
+ + + +GK++HG + + + S + V + LL MY G + A+ FY + R
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 441 -------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
+D VSW A++ G A+ G ++EA+ F EM+ + +
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
++ F ++L AC + ++ +GKQIH +IR ++ ++ AL+++Y KC CL YA V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F +V+ +M++G+ R EA+++F M++ GI PDH T + AC + ++
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ QF G+I + ++ LY + G + + N M V
Sbjct: 388 EEGSQFHGKA-ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/636 (28%), Positives = 318/636 (50%), Gaps = 38/636 (5%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ + R++ ++ + L N ++ Y K G++D+A + EMP+RD SWN M+
Sbjct: 132 LTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISG 191
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Y Q+G L M G+S ++TYA +L + + +LG K +H +V G +
Sbjct: 192 YAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRD 251
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+++S L+ YGKC + D +R ++ +N ++WN I+ Y + +A+ F +M
Sbjct: 252 EVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQL 311
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+ ++ TF L CS + +G+ +H I ++ FE +V SLT MY KCG L+
Sbjct: 312 QGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESI-IVHNSLTAMYAKCGSLD- 369
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR++F MP RN +SWN++++ + +
Sbjct: 370 ------------------------------AARKMFEGMPSRNSVSWNSLISAAIQHGCY 399
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+A F M+ D+VT +L+ C + K G +H + + + V+NAL
Sbjct: 400 ADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANAL 459
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK 477
+ MY K G+ +AR F M++R + VSWN +L Y +G + +A+ F +M + K
Sbjct: 460 IFMYAKLGDHEAARNVFDAMAER-NTVSWNTILAAYVEKGLNRDAVEMFWKM--DVARDK 516
Query: 478 FTFETLLAACANISS-LEQGKQIHCFVIRNCYE--INVVCRGALVEVYTKCCCLEYAIRV 534
T+ L AC+ ++ L GK IH +++ + + ++ V ALV +Y KC L+ A ++
Sbjct: 517 VTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKI 576
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E DV+ S+I+ + + +AL++ +M+++G+K D + F IL C H G +
Sbjct: 577 FDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDHSGLL 636
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ ++F SM YGI P+LEHY C+I + R G++ E V+R+P + +
Sbjct: 637 EEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLA 696
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR +G G+ AARR+ L+P P + + +N +
Sbjct: 697 ACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIY 732
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 257/542 (47%), Gaps = 42/542 (7%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ C A+ + RK+ + + ++ N I YGKC + +DA LF M +
Sbjct: 25 LRACTVEGALDDGRKVHAYIRESGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNV 84
Query: 109 GSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW +++G + Q G GR ++ LF M G+ N IT VLR+ L +Q+HG
Sbjct: 85 VSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHG 140
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+++ G + L ++LVD Y K + +A + ++ ++ +SWN+++ Y +G+ KE
Sbjct: 141 YVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKE 200
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ ++M ++ + P T+A L ACS EG IH ++ + + D+VV L
Sbjct: 201 GLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLG 260
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG LED + + ERN I+W +I+ YA +A F +M + V +
Sbjct: 261 MYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKA---- 316
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
D VT L+L C+ + + G +H +I + +
Sbjct: 317 ---------------------------DAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF 349
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S I V N+L MY KCG+L +AR F M R+ VSWN++++ + G +A F
Sbjct: 350 ES-IIVHNSLTAMYAKCGSLDAARKMFEGMPS-RNSVSWNSLISAAIQHGCYADAHKFFQ 407
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ E +RP + T ++L AC ++ ++G IH V+ + ++ AL+ +Y K
Sbjct: 408 RMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLG 467
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
E A VF + + + N+++ + R+A+E+F M + D +T+ L
Sbjct: 468 DHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD---VARDKVTYVAALD 524
Query: 587 AC 588
AC
Sbjct: 525 AC 526
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 249/523 (47%), Gaps = 40/523 (7%)
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ LEL+ M GV + +T+ LR+ E L +++H I + G ++ ++L+
Sbjct: 1 QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN-GKEAVVMFFKMLREDIRPLN 244
+ YGKC DA ++F +++ N VSW ++ + G+ G+E+V++F KM E IRP
Sbjct: 61 NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T L AC+ +G Q+HG +++ D + +L +MY K G +++A +L +
Sbjct: 121 ITMVAVLRACNLT----DGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+R++ISW ++SGYA SG +E LW+
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLR-----------------------CLWR------ 207
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M++ +VT +LN C+ ++ GK +H + + V + LL MY KC
Sbjct: 208 --MQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKC 265
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
G+L + ++ + R+ ++WN ++ YAR +A+ SF +MQ + + TF +
Sbjct: 266 GSLEDVKRSSCEVHE-RNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLM 324
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L C++ + L QG +H ++ + +E +++ +L +Y KC L+ A ++F+ S +
Sbjct: 325 LGTCSSPAHLAQGILLHDWISQLGFE-SIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNS 383
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ NS+I + +A + F MK EG +PD +T +L AC + N K
Sbjct: 384 VSWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIH-Q 442
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
M + G + +I +Y + G + + + M TV
Sbjct: 443 MVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTV 485
>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 315/635 (49%), Gaps = 37/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + CAS + + + ++ + ++ + + Y K G L AR +F+EM
Sbjct: 49 FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR 108
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD W AM+G Y++ G G L +M G+ +T +L E +L +
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QC 165
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH V GF ++ + +S+++ Y KC + DA+ +FD ++ ++ VSWN ++ Y GN
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
E + + ++M + +RP TF +L + G +H I+K F+ D + +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+KCG+ E + +L+ +P ++V+ W
Sbjct: 286 LITMYLKCGKEEASYRVLET-------------------------------IPNKDVVCW 314
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M++G R ++AL M ++ D+ + ++ CA L +G VHG++ R
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ Y+ + N+L+ MY KCG+L + + F +M++R D VSWNA+++GYA+ +A+
Sbjct: 375 HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER-DLVSWNAIISGYAQNVDLCKALL 433
Query: 465 SFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM+++T + FT +LL AC++ +L GK IHC VIR+ + ALV++Y
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC LE A R F S DV+ +I G+ + +G ALE++ G++P+H+ F
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFL 553
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L +C H G V+ L+ F SM +G+ P EH C++ L CR +++ F
Sbjct: 554 AVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFT 613
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P++ +L I D CR NG + + + EL P
Sbjct: 614 RPSIDVLGIILDACRANGKTEVEDIICEDMIELKP 648
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 255/541 (47%), Gaps = 44/541 (8%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+N+ + + +G + L F M + + + T+ ++L++ A L +H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
GF + + SSLV+ Y K ++ AR++F++++ ++ V W ++ Y AG EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ---IHGVIIKIDFEGDDVVLGSLTE 287
+ +M + I+P T LS E Q +H + F+ D V+ S+
Sbjct: 134 LVNEMRFQGIKPGPVTLLE------MLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
+Y KC + DA+ L DQ ++R+++SW +++SGYA G +
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM--------------------- 226
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
E L ++ MR DQ T G L+V + +++MG+ +H I + +
Sbjct: 227 ----------SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++ + AL+ MY KCG A + +D V W +++G R G++E+A+ FS
Sbjct: 277 DVDMHLKTALITMYLKCGK-EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EM Q + S +++A+CA + S + G +H +V+R+ Y ++ +L+ +Y KC
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP-DHITFHGIL 585
L+ ++ +F+ + D++ N++I G+ N +AL +F MK + ++ D T +L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC G + + + + + I P ++ +Y + GY++ + + + +
Sbjct: 456 QACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Query: 646 V 646
V
Sbjct: 515 V 515
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/592 (31%), Positives = 302/592 (51%), Gaps = 39/592 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y KCG+L+ AR +F+EM ER+ SW AM+ Y Q+G LF + SG N+
Sbjct: 194 INMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNK 253
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+++A++L + +L +LH I + G V++ ++L+ Y +C + +AR++FD+
Sbjct: 254 VSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDN 313
Query: 204 IQNKNAVSWNVIVRRYLVAGNG--KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+++ N VSWN ++ Y G G +EA +F M ++ +P FT+A+ L C+ +
Sbjct: 314 LRSPNRVSWNAMIAGY---GEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLN 370
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G ++H I++ +E D V +L MY KC
Sbjct: 371 RGKELHSQIVRTAWEADVTVATALISMYAKC----------------------------- 401
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
G + EAR++FN+MPE+N +SWNA +A R KEA MR+ D VT
Sbjct: 402 --GSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFIT 459
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+LN C + + G+ +HG I + SN V+NAL+ MY +CG L AR FY++ +RR
Sbjct: 460 LLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRI-RRR 518
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIH 500
D SWNA++ Y + G + A F + + E + K+TF +L A AN+ L+ G++IH
Sbjct: 519 DLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIH 578
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
V + E ++ L+++Y+KC L A VFK DV+ N+M+ + H++ G+
Sbjct: 579 GLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQ 638
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
+AL++F M+ EG+ PD T+ +L AC G ++ +F ++ + + HY CM
Sbjct: 639 DALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLK-EAAMETDTRHYACM 697
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+ R +KE E+F+ + M + CR + L E A L
Sbjct: 698 VAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHL 749
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/597 (28%), Positives = 301/597 (50%), Gaps = 47/597 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ YA Q C +K++ E +K+ ++ + P ++L N I Y KCG+++DA +F
Sbjct: 52 NFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQS 111
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M ++D SWNAM+ Y +G ++LF M G+ NQ ++ ++L + + L
Sbjct: 112 MEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFG 171
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+H I K G+ +V + ++L++ Y KC + AR++F++++ +N VSW ++ Y+
Sbjct: 172 EQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQH 231
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G+ KEA V+F K++R +P +FA+ L AC+ + +G+++H I + E + +V
Sbjct: 232 GDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVG 291
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L MY +CG L +AR + D N +SW ++++GY G + EA LF +M ++
Sbjct: 292 NALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKGF- 349
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
D+ T +L +CA +++ GKE+H I
Sbjct: 350 ------------------------------QPDRFTYASLLAICADRADLNRGKELHSQI 379
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R + +++ V+ AL+ MY KCG+L AR F QM + ++ VSWNA + R G +EA
Sbjct: 380 VRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPE-KNAVSWNAFIACCCRHGSEKEA 438
Query: 463 MTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F +M+ + P TF TLL +C + E+G+ IH + + N + AL+ +
Sbjct: 439 FQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISM 498
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y +C L A VF D+ N+MI + + A ++F K EG K D TF
Sbjct: 499 YGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTF 558
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQ------LEHYECMIKLYCRYGYMKE 632
+L A + L+ D+ R +G++ + + +IK+Y + G +++
Sbjct: 559 INVLRAIAN-------LEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRD 608
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 159/538 (29%), Positives = 277/538 (51%), Gaps = 37/538 (6%)
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSK 163
+ G +W+A +N + G+++ + + GV AN YA L+ + L K
Sbjct: 13 QESGSTWDAS-AKVGRNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSLAEGK 71
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H + F ++ L + L+ Y KC + DA +F +++K+ VSWN ++ Y + G
Sbjct: 72 KVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHG 131
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
G+EAV +F++M RE ++P +F + L AC G QIH I K +E D V
Sbjct: 132 RGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVST 191
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY KCG LE AR + ++ ERN++SWT+++SGY G +EA LF +
Sbjct: 192 ALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQK-------- 243
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
L+R T+ ++V+ IL C ++++ G ++H +I
Sbjct: 244 ----------------------LIRSGTQP-NKVSFASILGACTNPNDLEQGLKLHAYIK 280
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + V NAL+ MY +CG+L +AR F + + ++VSWNA++ GY G EEA
Sbjct: 281 QAGLEQEVLVGNALISMYARCGSLANARQVFDNL-RSPNRVSWNAMIAGYG-EGFMEEAF 338
Query: 464 TSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ + +P +FT+ +LLA CA+ + L +GK++H ++R +E +V AL+ +Y
Sbjct: 339 RLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMY 398
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC LE A +VF + + + N+ I C + +EA +VF M+++ + PDH+TF
Sbjct: 399 AKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFI 458
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L +C + + ++ ++G++ +I +Y R G + + + R+
Sbjct: 459 TLLNSCTSPEDFERG-RYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRI 515
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 220/457 (48%), Gaps = 34/457 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + C + + + KL + + V + N I Y +CG+L +AR +FD +
Sbjct: 256 FASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLR 315
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ SWNAM+ Y + GF LF DM G ++ TYA++L A+ +L K+
Sbjct: 316 SPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKE 374
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH IV+ + +V + ++L+ Y KC + +AR++F+ + KNAVSWN + G+
Sbjct: 375 LHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGS 434
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
KEA +F +M R+D+ P + TF L +C+ G IHG I + +++V +
Sbjct: 435 EKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANA 494
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY +CG+L DAR + + R++ SW
Sbjct: 495 LISMYGRCGKLADAREVFYRIRRRDLGSW------------------------------- 523
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NAM+A Y + A D + D+ T +L A L ++ G+++HG + +
Sbjct: 524 NAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEK 583
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+I + L+ MY KCG+LR A F + Q +D V WNA+L Y ++A+
Sbjct: 584 AGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNV-QEKDVVCWNAMLAAYNHSDHGQDALK 642
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
F +M+ E P T+ ++L ACA + ++E GK+ H
Sbjct: 643 LFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFH 679
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 198/400 (49%), Gaps = 36/400 (9%)
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
LNF +A L C S EG ++H + FE D + L MY KCG +ED
Sbjct: 51 LNF-YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIED----- 104
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
A +F M +++V+SWNAM++GY +EA+D
Sbjct: 105 --------------------------ANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVD 138
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
+ M++ +Q + IL+ C ++ G+++H I + Y S++ VS AL++MY
Sbjct: 139 LFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYC 198
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFE 481
KCG+L AR F +M + R+ VSW A+++GY + G S+EA F ++ + T+P+K +F
Sbjct: 199 KCGSLELARKVFNEMRE-RNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFA 257
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
++L AC N + LEQG ++H ++ + E V+ AL+ +Y +C L A +VF S
Sbjct: 258 SILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSP 317
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+ + N+MI G+ EA +F M+++G +PD T+ +L C ++ +
Sbjct: 318 NRVSWNAMIAGYGEGFM-EEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELH 376
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ + + +I +Y + G ++E N+MP
Sbjct: 377 SQI-VRTAWEADVTVATALISMYAKCGSLEEARKVFNQMP 415
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 121/231 (52%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C S + R + + + + N I YG+CG L DAR +F + RD
Sbjct: 460 LLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRD 519
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
GSWNAM+ AY Q+G G +LF+ G ++ T+ NVLR+ A +L +++HG
Sbjct: 520 LGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHG 579
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
L+ K G ++ + ++L+ Y KC + DA +F ++Q K+ V WN ++ Y + +G++
Sbjct: 580 LVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQD 639
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
A+ +F +M E + P + T+ + L AC+ L + G + H + + E D
Sbjct: 640 ALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETD 690
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 193/679 (28%), Positives = 323/679 (47%), Gaps = 52/679 (7%)
Query: 16 SSPKPTPSKTLTKTISGH----------------LKSDEPVSYSLYAHLFQLCASSKAIV 59
S P P + ++ TI+ H LK+ P + L + C+
Sbjct: 19 SLPHPATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFS 78
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
L ++ + ++ + I Y K G D AR +FD MPER+ W ++G Y+
Sbjct: 79 LGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYS 138
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+ G LF +M G+ + +T ++L +E L + LHG + GF ++
Sbjct: 139 RTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSE---LAHVQCLHGCAILYGFMSDIN 195
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
L +S+++ YGKC + +R++FD + +++ VSWN ++ Y GN E +++ M +
Sbjct: 196 LSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQG 255
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
TF + L + G +HG I++ F D V SL +Y+K
Sbjct: 256 FEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLK-------- 307
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
G+I A +F +++V+ W AM++G ++ +
Sbjct: 308 -----------------------GGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADK 344
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL M K T+ ++ CA L +G + G+I R + ++ N+L+
Sbjct: 345 ALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVT 404
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKF 478
MY KCG+L + I F M RRD VSWNA++TGYA+ G EA+ F+EM+ + + P
Sbjct: 405 MYAKCGHLDQSSIVF-DMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSI 463
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T +LL CA+ L GK IH FVIRN ++ +LV++Y KC L+ A R F +
Sbjct: 464 TIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQM 523
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
S D++ +++I+G+ ++ +G AL + + G+KP+H+ F +L +C H G V+ L
Sbjct: 524 PSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGL 583
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
++SM +GI P LEH+ C++ L R G ++E + + +P + +L I D CR
Sbjct: 584 NIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRA 643
Query: 659 NGYATLGEWAARRLNELNP 677
NG LG+ A + L P
Sbjct: 644 NGNNELGDTIANDILMLRP 662
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/653 (27%), Positives = 327/653 (50%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ ++ + C +++ +L ++ + ++ N + Y GNL A
Sbjct: 246 PTPYA-FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 304
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M +RD ++N ++ +Q G+ + +ELF M+ G+ + T A+++ + + +
Sbjct: 305 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 364
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +QLH K GF N +E +L++ Y KC + A F + + +N V WNV++
Sbjct: 365 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 424
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y + + + + +F +M E+I P +T+ + L C L G QIH IIK +F+ +
Sbjct: 425 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 484
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V L +MY K G+L+ A +L IR A
Sbjct: 485 AYVCSVLIDMYAKLGKLDTAWDIL-----------------------IRFAG-------- 513
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW M+AGYT+ +AL M D+V L ++ CAGL +K G+++
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + +SS++ NAL+ +Y +CG + + + F Q ++ D ++WNA+++G+ + G
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGN 632
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EEA+ F M E + FTF + + A + ++++QGKQ+H + + Y+ A
Sbjct: 633 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 692
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC + A + F E S+ + + N++I + + G EAL+ F M ++P+
Sbjct: 693 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 752
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+T G+L AC H G V + +F+SM +YG+ P+ EHY C++ + R G + ++F+
Sbjct: 753 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFI 812
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE+AA L EL P + + +N +
Sbjct: 813 QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 865
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 267/581 (45%), Gaps = 35/581 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
++ ++ E RKL S ++ L + + Y G+L A +FDEMPER +WN
Sbjct: 57 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 116
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHGLIVKR 172
M+ G LF+ M V+ N+ T++ VL + + V +Q+H I+ +
Sbjct: 117 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 176
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
G + ++ + L+D Y + + ARR+FD ++ K+ SW ++ EA+ +F
Sbjct: 177 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 236
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
M I P + F++ L AC + S G Q+HG+++K+ F D V +L +Y
Sbjct: 237 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 296
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G N+IS A +F+ M +R+ +++N ++ G +
Sbjct: 297 G---------------NLIS----------------AEHIFSNMSQRDAVTYNTLINGLS 325
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ ++A++ M + D TL ++ C+ + G+++H + + ++SN
Sbjct: 326 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 385
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
+ ALL++Y KC ++ +A +F + ++ + V WN +L Y + F +MQ E
Sbjct: 386 IEGALLNLYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 444
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P+++T+ ++L C + LE G+QIH +I+ +++N L+++Y K L+ A
Sbjct: 445 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 504
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ + DV+ +MI G+ +AL F M GI+ D + + AC
Sbjct: 505 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 564
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+K Q + C G L ++ LY R G ++E
Sbjct: 565 QALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 604
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 212/470 (45%), Gaps = 44/470 (9%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE-----CY 87
HL EP S +L A L C++ + ++L + Y T F N IE Y
Sbjct: 341 HLDGLEPDSNTL-ASLVVACSADGTLFRGQQLHA-----YTTKLGFASNNKIEGALLNLY 394
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KC +++ A F E + WN ML AY + +F M + NQ TY
Sbjct: 395 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 454
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L++ +L + +Q+H I+K F N + S L+D Y K + A + K
Sbjct: 455 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 514
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ VSW ++ Y +A+ F +ML IR NA+ AC+ L + EG QIH
Sbjct: 515 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 574
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
F D +L +Y +CG++E++ +Q + + I+W ++VSG+ SG
Sbjct: 575 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 634
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
EA +F M + D + T G + +
Sbjct: 635 EALRVFVRMNREGI-------------------------------DNNNFTFGSAVKAAS 663
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +K GK+VH I + Y S V NAL+ MY KCG++ A F ++S +++VSWN
Sbjct: 664 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST-KNEVSWN 722
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
A++ Y++ G EA+ SF +M RP+ T +L+AC++I +++G
Sbjct: 723 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 772
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 227/493 (46%), Gaps = 41/493 (8%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L ++LH I+K G N L L D Y + A ++FD++ + +WN +++
Sbjct: 61 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 120
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDFEG 277
E +F +M+ E++ P TF+ L AC S ++ + QIH I+
Sbjct: 121 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 180
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
VV L ++Y + +G + AR +F+ +
Sbjct: 181 STVVCNPLIDLYSR-------------------------------NGFVDLARRVFDGLR 209
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ SW AM++G +++ EA+ M +L+ C + +++G++
Sbjct: 210 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + + +SS+ +V NAL+ +Y GNL SA F MSQR D V++N ++ G ++ G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCG 328
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E+AM F M + P T +L+ AC+ +L +G+Q+H + + + N G
Sbjct: 329 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 388
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+ +Y KC +E A+ F E+ +V++ N M++ + + R + +F M+ E I P
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 577 DHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYEC--MIKLYCRYGYMKEL 633
+ T+ IL CI G+++L Q ++ + QL Y C +I +Y + G +
Sbjct: 449 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTA 504
Query: 634 EDFVNRMPFNPTV 646
D + R V
Sbjct: 505 WDILIRFAGKDVV 517
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 22/198 (11%)
Query: 474 RPSKFTFETLLAACANIS-SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
RP+ T + LL C + SL++G+++H +++ + N L + Y L A
Sbjct: 41 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF E + N MI E +F M E + P+ TF G+L AC G
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGG 159
Query: 593 NVKLALQFFDSMRCKY-GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
+V + R Y G+ +I LY R G+ V + R+
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF----------------VDLARR 203
Query: 652 IFDKCRKNGYATLGEWAA 669
+FD R +++ W A
Sbjct: 204 VFDGLRLKDHSS---WVA 218
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 305/587 (51%), Gaps = 34/587 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H+ P Y +++ + CA + +L + + ++ N + Y + GN
Sbjct: 282 HISGLSPTPY-VFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGN 340
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
A+ +F ++ +D S+N+++ +Q G R LELF M + + +T A++L +
Sbjct: 341 FISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSA 400
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A L +QLH +K G C ++I+E SL+D Y KC +T A + F Q +N V W
Sbjct: 401 CASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLW 460
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
NV++ Y N ++ +F +M E + P FT+ + L C+ + G QIH IK
Sbjct: 461 NVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIK 520
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
FE + V L +MY K G+L+ A R +
Sbjct: 521 TGFEFNVYVCSVLIDMYAKLGKLDIA-------------------------------RGI 549
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
+ E +V+SW A++AGYT+ L+ EAL+ M D + ++ CAG+ +
Sbjct: 550 LRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQAL 609
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G+++H + + YS ++ + NAL+ +Y +CG ++ A + F ++ +D +SWNA+++G
Sbjct: 610 SQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKI-DAKDSISWNALMSG 668
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+A+ G EEA+ F++M + + S FTF + ++A AN+++++QGKQIH +++ ++
Sbjct: 669 FAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSE 728
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+ AL+ +Y KC C++ A R F E + I N+MI G+ + G EA+ +F MK+
Sbjct: 729 IEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQ 788
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G KP+H+TF G++ AC H G V L +F+SM ++G+I LE +
Sbjct: 789 VGAKPNHVTFVGVISACSHVGLVNEGLAYFESMSKEHGLIIGLEDFH 835
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 287/595 (48%), Gaps = 45/595 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C +S + ++ +KL S ++ L ++ IE Y G+L+ +FD+MP
Sbjct: 90 YLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMP 149
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSK 163
R +WN +L N R L LF M V+ N++T A+VLR+ + + +
Sbjct: 150 SRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVE 209
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H I+ RG + I + L+D Y K + AR++FD++ K++VSW ++ Y G
Sbjct: 210 QIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNG 269
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
G+EA+ +F +M + P + F++ L AC+ + G Q+H ++ K F + V
Sbjct: 270 FGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCN 329
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +Y + G N IS A+++F+++ ++ +S
Sbjct: 330 ALVTLYSRLG---------------NFIS----------------AQQVFSKIKCKDEVS 358
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+N++++G ++ AL+ M+ D VT+ +L+ CA + + G+++H +
Sbjct: 359 YNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAI 418
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ +I + +LLD+Y KC ++ +A F+ +Q + V WN +L Y + ++
Sbjct: 419 KAGMCLDIIIEGSLLDLYVKCSDITTAH-KFFATTQTENVVLWNVMLVAYGQLDNLSKSF 477
Query: 464 TSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ E P++FT+ ++L C + +L+ G+QIH I+ +E NV L+++Y
Sbjct: 478 CIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMY 537
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
K L+ A + + + DV+ ++I G+ ++ EAL +F M GI+ D+I F
Sbjct: 538 AKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFS 597
Query: 583 GILLAC-----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ AC + +G A + G L ++ LY R G ++E
Sbjct: 598 SAISACAGIQALSQGQQIHAQSYIS------GYSEDLSIGNALVSLYARCGRIQE 646
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 256/525 (48%), Gaps = 39/525 (7%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+N R ++ ++ G A TY +L K+LH I+K GF +
Sbjct: 64 ENEESARGIDFLHVVDERGSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESV 123
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
L L++ Y + ++FDD+ +++ ++WN ++ + + +F +M+ E+
Sbjct: 124 LCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEEN 183
Query: 240 IRPLNFTFANALFA-CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ P T A+ L A S + Y QIH II +
Sbjct: 184 VNPNEVTVASVLRAYGSGNVAFYYVEQIHASII--------------------------S 217
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
RGL + I+ ++ YA +G IR AR++F+E+ ++ +SW A+++ Y+++ +
Sbjct: 218 RGL-----GTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGE 272
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
EA+ M + +L+ CA + +G+++H + + + +V NAL+
Sbjct: 273 EAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALV 332
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
+Y + GN SA+ F ++ + +D+VS+N++++G +++G S+ A+ F +MQ + +P
Sbjct: 333 TLYSRLGNFISAQQVFSKI-KCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDC 391
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T +LL+ACA+I SL +G+Q+H + I+ ++++ G+L+++Y KC + A + F
Sbjct: 392 VTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFAT 451
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ + +V++ N M++ + + ++ +F M+ EG+ P+ T+ IL C G + L
Sbjct: 452 TQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLG 511
Query: 598 LQFFDSMRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRM 640
Q S K G + Y C +I +Y + G + + R+
Sbjct: 512 EQ-IHSQAIKTGF--EFNVYVCSVLIDMYAKLGKLDIARGILRRL 553
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 14/209 (6%)
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+R T+ LL C N +S K++H +++ ++ V L+E Y L +
Sbjct: 83 SRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVV 142
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF + S ++ N ++ G N+ L +F M +E + P+ +T +L A G
Sbjct: 143 KVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRA-YGSG 201
Query: 593 NVKLALQFFDSMRCKYGIIPQ---LEHYEC--MIKLYCRYGYMKELEDFVNRMPFNPTVP 647
NV F+ + II + C +I LY + G+++ + + +V
Sbjct: 202 NVA----FYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVS 257
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ + +NG+ GE A R E++
Sbjct: 258 WV-AVISSYSQNGF---GEEAIRLFCEMH 282
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 319/642 (49%), Gaps = 37/642 (5%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPP-VFLLNRAIECYGKCGNLDDA 96
P + S + L Q K++ + R L + ++ + ++L N I Y KC +L A
Sbjct: 4 HPQNLSSFNSLVQF-THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRT--LELFLDMNHSGVSANQITYANVLRSSA 154
+ +FD + +D SWN ++ Y+Q G G + +ELF M + N T++ + +++
Sbjct: 63 KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+ +Q H + +K +V + SSL++ Y K ++ +AR +FD + +N V+W
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWAT 182
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y + EA +F M RE+ F F + L A + G QIH + +K
Sbjct: 183 MISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTG 242
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+L +L MY KCG L+D+ ++F
Sbjct: 243 LLVFLSILNALVTMYAKCGSLDDSL-------------------------------QVFE 271
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
++N I+W+AM+ GY +S +AL M + + TL +LN C+ ++
Sbjct: 272 MSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEE 331
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK+VH ++ + + S +++ AL+DMY K G AR F + Q+ D V W +++ GY
Sbjct: 332 GKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYL-QQPDLVLWTSMIAGYV 390
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G++E+A++ + MQ E P++ T ++L AC+N+++ +QG+QIH I+ + V
Sbjct: 391 QNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVT 450
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL +Y KC LE VF+ D+I N+MI G N G+EALE+F M+++
Sbjct: 451 IGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQD 510
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
KPD +TF +L AC H G V +F M ++G++P++EHY CM+ + R G + E
Sbjct: 511 TKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEA 570
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
++F+ + + + R + CR LG +A +L EL
Sbjct: 571 KEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMEL 612
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 184/397 (46%), Gaps = 37/397 (9%)
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDA 298
+ P N + N+L + S +G +H IIK+ + L SL Y KC L A
Sbjct: 3 LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREA--RELFNEMPERNVISWNAMLAGYTRSLL 356
+ + D+ +++ISW +++GY+ G + ELF M N++ +G
Sbjct: 63 KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSG------ 116
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
I + LS I G++ H + ++FV ++
Sbjct: 117 -------------------------IFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSS 151
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP- 475
LL+MY K G L AR F +M + R++V+W +++GYA + + EA F M+ E
Sbjct: 152 LLNMYCKAGLLFEAREVFDRMPE-RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDV 210
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
++F F ++L+A A ++ GKQIHC ++ + + ALV +Y KC L+ +++VF
Sbjct: 211 NEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVF 270
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ S+ + I ++MI G+ + +AL++F M GI P T G+L AC V+
Sbjct: 271 EMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVE 330
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
Q + + K G QL ++ +Y + G ++
Sbjct: 331 EGKQVHNYL-LKLGFESQLYIMTALVDMYAKSGVTED 366
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H P ++L + C+ + A+ E +++ + L+ ++++ ++ Y K G
Sbjct: 305 HFAGINPSEFTLVG-VLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGV 363
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+DAR F+ + + D W +M+ Y QNG L L+ M G+ N++T A+VL++
Sbjct: 364 TEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKA 423
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ +Q+H +K G V + S+L Y KC + + +F + ++ +SW
Sbjct: 424 CSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISW 483
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
N ++ G GKEA+ +F +M ++D +P + TF N L ACS +
Sbjct: 484 NAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHM 528
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/592 (31%), Positives = 297/592 (50%), Gaps = 33/592 (5%)
Query: 87 YGKCGNLDDARGLFDEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQIT 145
Y KCG+L++AR +FDEMP+ D W A++ Y + G + LF M+ GV + T
Sbjct: 139 YLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYT 198
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ VL+ A + + +HGL+ K GF + ++L+ Y K DA +FD +
Sbjct: 199 ISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP 258
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+++ +SWN ++ G +A+ +F +M E + T + L AC+ L + G
Sbjct: 259 HRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRV 318
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG +K F + L +MY C W
Sbjct: 319 VHGYSVKTGFISQTSLANVLLDMYSNCS------------------DW------------ 348
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
R ++F M ++NV+SW AM+ YTR+ L+ + M D + L+
Sbjct: 349 -RSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHA 407
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
AG +K GK VHG+ RN + V+NAL++MY KCGN+ A++ F + + D +S
Sbjct: 408 FAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSK-DMIS 466
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
WN ++ GY+R + EA + F+EM + RP+ T +L A A++SSLE+G+++H + +R
Sbjct: 467 WNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSSLERGREMHAYALR 526
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
Y + AL+++Y KC L A R+F S+ ++I M+ G+ + RGR+A+ +
Sbjct: 527 RGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIAL 586
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M+ GI PD +F IL AC H G +FFD+MR ++ I P+L+HY CM+ L
Sbjct: 587 FEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLI 646
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G +KE +F++ MP P + + CR + L E A R+ EL P
Sbjct: 647 NTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEP 698
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 216/449 (48%), Gaps = 40/449 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLI----VKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+Y VL+ +E L K+ H L+ + R NV L LV Y KC + +ARR+
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNV-LGQKLVLMYLKCGDLENARRV 151
Query: 201 FDDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
FD++ Q + W ++ Y AG+ +E V++F KM +RP +T + L + L S
Sbjct: 152 FDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGS 211
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G +HG++ K+ F V +L Y K R +DA + D R++ISW S++SG
Sbjct: 212 IEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISG 271
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+G +A ELF M W E +++D TL
Sbjct: 272 CTSNGLYDKAIELFVRM--------------------WLEG-----------EELDSATL 300
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+L CA L + +G+ VHG+ + + S ++N LLDMY C + RS F M Q
Sbjct: 301 LSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQ 360
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
++ VSW A++T Y R G ++ F EM E TRP F + L A A L+ GK
Sbjct: 361 -KNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKS 419
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H + IRN E + AL+E+Y KC +E A +F S D+I N++I G+ N
Sbjct: 420 VHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNL 479
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLA 587
EA +F M + ++P+ +T IL A
Sbjct: 480 ANEAFSLFTEMLLQ-LRPNAVTMTCILPA 507
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 5/298 (1%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N ++ Y C + +F M +++ SW AM+ +YT+ G + LF +M G
Sbjct: 334 LANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEG 393
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + L + A L K +HG ++ G + + ++L++ Y KC M +A+
Sbjct: 394 TRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAK 453
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+FD + +K+ +SWN ++ Y EA +F +ML + +RP T L A + LS
Sbjct: 454 LIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLS 512
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S G ++H ++ + DD V +L +MYVKCG L AR L D+ +N+ISWT +V+
Sbjct: 513 SLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVA 572
Query: 319 GYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
GY + GR R+A LF +M + S++A+L + S L E F MRK K
Sbjct: 573 GYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHK 630
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 42/370 (11%)
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-- 270
N+ ++R +G+ +EA+ + +D ++ L CS + S G + H ++
Sbjct: 65 NLHIQRLCRSGDLEEALGLLGSDGVDD-----RSYGAVLQLCSEVRSLEGGKRAHFLVRA 119
Query: 271 IKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ +G D VLG L MY+KCG LE+AR
Sbjct: 120 SSLGRDGMDNVLGQKLVLMYLKCGDLENAR------------------------------ 149
Query: 330 RELFNEMPE-RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
+F+EMP+ +V W A+++GY ++ +E + M D T+ +L AG
Sbjct: 150 -RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L I+ G+ VHG + + + S V NAL+ Y K + A + F M RD +SWN+
Sbjct: 209 LGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPH-RDVISWNS 267
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++G G ++A+ F M E T ++L ACA + L G+ +H + ++
Sbjct: 268 MISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTG 327
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ L+++Y+ C ++F+ +V+ +MI + + +F
Sbjct: 328 FISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQ 387
Query: 568 LMKKEGIKPD 577
M EG +PD
Sbjct: 388 EMGLEGTRPD 397
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 15/263 (5%)
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN----DYSSNIFVSNALLDMYRKCGN 426
+ +D + G +L +C+ + ++ GK H + + D N+ + L+ MY KCG+
Sbjct: 86 SDGVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNV-LGQKLVLMYLKCGD 144
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLA 485
L +AR F +M Q D W A+++GYA+ G E + F +M RP +T +L
Sbjct: 145 LENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLK 204
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
A + S+E G+ +H + + + AL+ Y K + AI VF DVI
Sbjct: 205 CIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVIS 264
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM- 604
NSMI G N +A+E+F M EG + D T +L AC +L L F +
Sbjct: 265 WNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPAC-----AELHLLFLGRVV 319
Query: 605 ---RCKYGIIPQLEHYECMIKLY 624
K G I Q ++ +Y
Sbjct: 320 HGYSVKTGFISQTSLANVLLDMY 342
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ N I+ Y KCG L AR LFD + ++ SW M+ Y +G + LF M S
Sbjct: 534 FVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVS 593
Query: 138 GVSANQITYANVL 150
G++ + +++ +L
Sbjct: 594 GIAPDAASFSAIL 606
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/653 (27%), Positives = 327/653 (50%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ ++ + C +++ +L ++ + ++ N + Y GNL A
Sbjct: 286 PTPYA-FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M +RD ++N ++ +Q G+ + +ELF M+ G+ + T A+++ + + +
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +QLH K GF N +E +L++ Y KC + A F + + +N V WNV++
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y + + + + +F +M E+I P +T+ + L C L G QIH IIK +F+ +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V L +MY K G+L+ A +L IR A
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDIL-----------------------IRFAG-------- 553
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW M+AGYT+ +AL M D+V L ++ CAGL +K G+++
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + +SS++ NAL+ +Y +CG + + + F Q ++ D ++WNA+++G+ + G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGN 672
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EEA+ F M E + FTF + + A + ++++QGKQ+H + + Y+ A
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC + A + F E S+ + + N++I + + G EAL+ F M ++P+
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+T G+L AC H G V + +F+SM +YG+ P+ EHY C++ + R G + ++F+
Sbjct: 793 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFI 852
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE+AA L EL P + + +N +
Sbjct: 853 QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 267/581 (45%), Gaps = 35/581 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
++ ++ E RKL S ++ L + + Y G+L A +FDEMPER +WN
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHGLIVKR 172
M+ G LF+ M V+ N+ T++ VL + + V +Q+H I+ +
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
G + ++ + L+D Y + + ARR+FD ++ K+ SW ++ EA+ +F
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
M I P + F++ L AC + S G Q+HG+++K+ F D V +L +Y
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G N+IS A +F+ M +R+ +++N ++ G +
Sbjct: 337 G---------------NLIS----------------AEHIFSNMSQRDAVTYNTLINGLS 365
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ ++A++ M + D TL ++ C+ + G+++H + + ++SN
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
+ ALL++Y KC ++ +A +F + ++ + V WN +L Y + F +MQ E
Sbjct: 426 IEGALLNLYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P+++T+ ++L C + LE G+QIH +I+ +++N L+++Y K L+ A
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ + DV+ +MI G+ +AL F M GI+ D + + AC
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+K Q + C G L ++ LY R G ++E
Sbjct: 605 QALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 212/470 (45%), Gaps = 44/470 (9%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE-----CY 87
HL EP S +L A L C++ + ++L + Y T F N IE Y
Sbjct: 381 HLDGLEPDSNTL-ASLVVACSADGTLFRGQQLHA-----YTTKLGFASNNKIEGALLNLY 434
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KC +++ A F E + WN ML AY + +F M + NQ TY
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L++ +L + +Q+H I+K F N + S L+D Y K + A + K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ VSW ++ Y +A+ F +ML IR NA+ AC+ L + EG QIH
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
F D +L +Y +CG++E++ +Q + + I+W ++VSG+ SG
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
EA +F M + D + T G + +
Sbjct: 675 EALRVFVRMNREGI-------------------------------DNNNFTFGSAVKAAS 703
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +K GK+VH I + Y S V NAL+ MY KCG++ A F ++S +++VSWN
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST-KNEVSWN 762
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
A++ Y++ G EA+ SF +M RP+ T +L+AC++I +++G
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 226/486 (46%), Gaps = 41/486 (8%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L ++LH I+K G N L L D Y + A ++FD++ + +WN +++
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDFEG 277
E +F +M+ E++ P TF+ L AC S ++ + QIH I+
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
VV L ++Y + +G + AR +F+ +
Sbjct: 221 STVVCNPLIDLYSR-------------------------------NGFVDLARRVFDGLR 249
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ SW AM++G +++ EA+ M +L+ C + +++G++
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + + +SS+ +V NAL+ +Y GNL SA F MSQR D V++N ++ G ++ G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCG 368
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E+AM F M + P T +L+ AC+ +L +G+Q+H + + + N G
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+ +Y KC +E A+ F E+ +V++ N M++ + + R + +F M+ E I P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 577 DHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYEC--MIKLYCRYGYMKEL 633
+ T+ IL CI G+++L Q ++ + QL Y C +I +Y + G +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTA 544
Query: 634 EDFVNR 639
D + R
Sbjct: 545 WDILIR 550
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 22/198 (11%)
Query: 474 RPSKFTFETLLAACANIS-SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
RP+ T + LL C + SL++G+++H +++ + N L + Y L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF E + N MI E +F M E + P+ TF G+L AC G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGG 199
Query: 593 NVKLALQFFDSMRCKY-GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
+V + R Y G+ +I LY R G+ V + R+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF----------------VDLARR 243
Query: 652 IFDKCRKNGYATLGEWAA 669
+FD R +++ W A
Sbjct: 244 VFDGLRLKDHSS---WVA 258
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 184/639 (28%), Positives = 330/639 (51%), Gaps = 35/639 (5%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
SSK ++ + + ++T + F+ + ++ Y +L+ AR +FD+ + G NA
Sbjct: 41 SSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNA 100
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
ML Y Q+G TLELF M + + + L++ A L+ + ++ V++G
Sbjct: 101 MLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKG 160
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
N + SS++ K + +A+R+FD + NK+ V WN I+ Y+ AG A +FF
Sbjct: 161 MEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFF 220
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M I+P T + + AC + + G +HG ++ + D +VL S +MY K G
Sbjct: 221 EMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMG 280
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+E AR + + RN++SW +++SG +G + E+ +LF+ +
Sbjct: 281 DIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLV---------------- 324
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+++ D T+ +L C+ + + GK +HG R+ + SN+ +
Sbjct: 325 ---------------RSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLIL 368
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
S A++D+Y KCG+L+ A F +M + R+ ++W A+L G A+ G +E+A+ F++MQ E
Sbjct: 369 STAIVDLYSKCGSLKQATFVFNRM-KDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEG 427
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+ TF +L+ +CA++ SL++G+ IH + R + ++V ALV++Y KC + A
Sbjct: 428 IAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAE 487
Query: 533 RVFKESS-SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
R+F S S DV++ NSMI G+ + G +A+ ++ M +EG+KP+ TF +L AC H
Sbjct: 488 RIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHS 547
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
V+ + F+SM + I P +HY C++ L R G +E + + +MPF P +L
Sbjct: 548 RLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEA 607
Query: 652 IFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR + LG + +L L+ P + + +N +
Sbjct: 608 LLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIY 646
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 184/673 (27%), Positives = 340/673 (50%), Gaps = 37/673 (5%)
Query: 20 PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFL 79
P P+ T TIS +++ + ++ + L ++ S+ + + + S LV F
Sbjct: 49 PKPNVTRYSTIS----NEDTLLFNDWPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFK 104
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + Y K LD A+ +FD M R+ +W +++ Y ++ + DM+ G
Sbjct: 105 GNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGE 164
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ N+ T +L++ + + + +Q+H ++K GF NV + +SL+ Y K A +
Sbjct: 165 NFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEK 224
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD + K+ N ++ Y AGNG +A+ +F +L + P ++TF N + C+
Sbjct: 225 VFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLG 284
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
EG Q+ G+ K F + V ++ MY G ++A + E+N+ISWT+++SG
Sbjct: 285 VEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISG 344
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y+ SG ++A + F + + I++++ L L
Sbjct: 345 YSRSGYGKKAVDAFLGLHDELGINFDSTL------------------------------L 374
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
IL+ C+ + +++G ++HGF+ + + ++ V+ AL+D+Y KC L+SARI F +S
Sbjct: 375 TAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSN 434
Query: 440 RRDKVSWNAVLTGYAR-RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+ S+NA+L G+ G E+ M F++++ +P TF LL+ AN +SLE+G+
Sbjct: 435 -KGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGR 493
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
H + ++ ++ N+ +++ +Y KC +E A ++F + D I N++I + +
Sbjct: 494 SFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHG 553
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+ +++L +F MK++G PD T IL AC + G K + F+ M KYGI P LEHY
Sbjct: 554 QAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHY 613
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM L R GY+ E D + R PF + + R + + C+ +G G+ A++ L +L+P
Sbjct: 614 ACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSP 673
Query: 678 WAPFQFKITTNRF 690
+ + +N +
Sbjct: 674 VEAGSYILVSNMY 686
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 306/600 (51%), Gaps = 34/600 (5%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSG 138
+N ++ K G+L++AR LFD+M +RD SW ++ Y L LF M G
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + + L++ + + + LHG VK F +V + S+LVD Y K + +
Sbjct: 64 LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+F ++ +N VSW I+ + AG KEA+ F M + + +TF++AL AC+
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G +IH +K F V +L MY KCG+L+
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLD---------------------- 221
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
Y + LF M +R+V+SW ++ + + A+ MR+T ++ T
Sbjct: 222 -YGL--------RLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFT 272
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+++ CA L I+ G+++H + R ++ V+N+++ MY KC L A F +S
Sbjct: 273 FAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS 332
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
RRD +SW+ +++GYA+ G EEA S M+ E RP++F F ++L+ C N++ LEQGK
Sbjct: 333 -RRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGK 391
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H V+ E N + + AL+ +Y+KC ++ A ++F E+ +++ +MI G+ +
Sbjct: 392 QLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHG 451
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+EA+++F + K G++PD +TF +L AC H G V L +F+S+ + I P +HY
Sbjct: 452 YSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY 511
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L CR G + + E + MPF + + CR +G G+ AA ++ +L+P
Sbjct: 512 GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDP 571
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 205/421 (48%), Gaps = 33/421 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + ++ Y K G +D+ +F EMP R+ SW A++ + G+ L F DM
Sbjct: 103 VFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWI 162
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
V + T+++ L++ A+ L +++H +K+GF + ++L Y KC +
Sbjct: 163 QKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDY 222
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
R+F+ + ++ VSW I+ + G + AV F +M D+ P FTFA + C+
Sbjct: 223 GLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCAT 282
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G Q+H +I+ V S+ MY KC +L+ A + R+IISW+++
Sbjct: 283 LGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTM 342
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGYA G +EA D++ MR+ ++
Sbjct: 343 ISGYAQGG-------------------------------CGEEAFDYLSWMRREGPRPNE 371
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L+VC ++ ++ GK++H + N V +AL++MY KCG+++ A F +
Sbjct: 372 FAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDE 431
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
++ + VSW A++ GYA G S+EA+ F ++ + RP TF +LAAC++ ++
Sbjct: 432 -AEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDL 490
Query: 496 G 496
G
Sbjct: 491 G 491
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 186/413 (45%), Gaps = 44/413 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + CA S A+ R++ + T F+ N Y KCG LD LF+ M
Sbjct: 172 FSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMT 231
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD SW ++ + Q G ++ F M + VS N+ T+A V+ A + +Q
Sbjct: 232 QRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQ 291
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH +++RG ++ + +S++ Y KC + A +F + ++ +SW+ ++ Y G
Sbjct: 292 LHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGC 351
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G+EA M RE RP F FA+ L C ++ +G Q+H ++ + E + +V +
Sbjct: 352 GEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSA 411
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KCG +++A + D+ + NI+SWT++++GYA G +EA +LF ++P
Sbjct: 412 LINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLP------- 464
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG-------KE 397
K D VT +L C+ + +G +
Sbjct: 465 ------------------------KVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSK 500
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
VH D+ ++D+ + G L A M +RD V W+ +L
Sbjct: 501 VHQICPSKDH------YGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLL 547
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 148/329 (44%), Gaps = 5/329 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA+ I +L ++++ + + N + Y KC LD A +F +
Sbjct: 273 FAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS 332
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SW+ M+ Y Q G + M G N+ +A+VL L KQ
Sbjct: 333 RRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQ 392
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH ++ G N +++S+L++ Y KC + +A ++FD+ + N VSW ++ Y G
Sbjct: 393 LHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGY 452
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
+EA+ +F K+ + +RP + TF L ACS G + K+ G
Sbjct: 453 SQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYG 512
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPER 339
+ ++ + GRL DA ++ P +R+ + W++++ I G + + A E ++
Sbjct: 513 CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPN 572
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMR 368
++ + Y WKEA + +M+
Sbjct: 573 CAVTHITLANMYAAKGKWKEAAEVRKMMK 601
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 189/655 (28%), Positives = 321/655 (49%), Gaps = 36/655 (5%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
+ + T + LK+ P + L + C+S L ++ + ++ +
Sbjct: 51 RQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLDAYIASSL 110
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y K G D AR +FD MPER+ W +++G Y++ G LF +M G+ +
Sbjct: 111 INFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSS 170
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T ++L +E L + LHG + GF ++ L +S++ YGKC + +R++FD
Sbjct: 171 VTMLSLLFGVSE---LAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDY 227
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ ++ VSWN +V Y G E +++ M + P TF + L + G
Sbjct: 228 MDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLG 287
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+HG I++ F+ D V SL MY+K
Sbjct: 288 RCLHGQILRTCFDLDAHVETSLIVMYLK-------------------------------G 316
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G I A +F +++V+ W AM++G ++ +AL M K T+ ++
Sbjct: 317 GNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVI 376
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA L +G VHG++ R++ +I N+L+ M+ KCG+L + I F +M+ +R+
Sbjct: 377 TACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMN-KRNL 435
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA++TGYA+ G +A+ F+EM+ + + P T +LL CA+ L GK IH F
Sbjct: 436 VSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSF 495
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
VIRN ++ +LV++Y KC L+ A R F + S D++ +++I+G+ ++ +G A
Sbjct: 496 VIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETA 555
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L + + G+KP+H+ F +L +C H G V+ L ++SM +GI P LEH+ C++
Sbjct: 556 LRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVD 615
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G ++E + + +P + +L I D CR NG LG+ A + L P
Sbjct: 616 LLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKP 670
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 155/564 (27%), Positives = 267/564 (47%), Gaps = 45/564 (7%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQLHG 167
S+NA++ ++ G + L + M + V ++ T+ ++L+ SS LG+S LH
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLS--LHQ 93
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+ G + + SSL++ Y K AR++FD + +N V W I+ Y G E
Sbjct: 94 RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A +F +M R+ I+P + T + LF S L+ +HG I F D + S+
Sbjct: 154 AFSLFDEMRRQGIQPSSVTMLSLLFGVSELA---HVQCLHGSAILYGFMSDINLSNSMLS 210
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KC +E +R L D D+R+++SW S+VS YA G I E L
Sbjct: 211 MYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKT------------ 258
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
MR + D T G +L+V A E+K+G+ +HG I R +
Sbjct: 259 -------------------MRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCF 299
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ V +L+ MY K GN+ A ++ S +D V W A+++G + G +++A+ F
Sbjct: 300 DLDAHVETSLIVMYLKGGNIDIA-FRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFR 358
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+M ++ + S T +++ ACA + S G +H ++ R+ +++ + +LV ++ KC
Sbjct: 359 QMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCG 418
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
L+ + VF + + +++ N+MI G+ N +AL +F M+ + PD IT +L
Sbjct: 419 HLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQ 478
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
C G + L ++ S + G+ P + ++ +YC+ G + + N+MP + V
Sbjct: 479 GCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLV 537
Query: 647 PMLRKIFDKCRKNGYATLGEWAAR 670
I GY GE A R
Sbjct: 538 SWSAIIVGY----GYHGKGETALR 557
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 184/618 (29%), Positives = 309/618 (50%), Gaps = 37/618 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF---LDM 134
F+ N I YGKCG ++ A +F+ M R+ SWN+++ A ++NG G +F L
Sbjct: 231 FVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLIS 290
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ + T V+ + A E+ + +HGL K G V + +SLVD Y KC +
Sbjct: 291 EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFA 253
+AR +FD KN VSWN I+ Y G+ + + +M RE+ +R T N L A
Sbjct: 351 GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPA 410
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS +IHG + F D++V + Y KC L+ A ER
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCA--------ER----- 457
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+F M + V SWNA++ + ++ ++LD +M + D
Sbjct: 458 ------------------VFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMD 499
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+ T+G +L CA L ++ GKE+HGF+ RN + F+ +L+ +Y +C ++ ++
Sbjct: 500 PDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLI 559
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F +M + + V WN ++TG+++ EA+ +F +M +P + +L AC+ +S+
Sbjct: 560 FDKM-ENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSA 618
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GK++H F ++ + AL+++Y KC C+E + +F + D + N +I G
Sbjct: 619 LRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAG 678
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + G +A+E+F LM+ +G +PD TF G+L+AC H G V L++ M+ YG+ P
Sbjct: 679 YGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKP 738
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY C++ + R G + E VN MP P + + CR G +GE +++L
Sbjct: 739 KLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKL 798
Query: 673 NELNPWAPFQFKITTNRF 690
EL P + + +N +
Sbjct: 799 LELEPNKAENYVLLSNLY 816
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 168/611 (27%), Positives = 290/611 (47%), Gaps = 38/611 (6%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT-PPVFLLNRAIECYGKCGNLD 94
S +S L + C K I RK+ + + + V L R I Y CG+
Sbjct: 86 SSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPS 145
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSS 153
D+RG+FD E+D +NA+L Y++N + LFL++ + + ++ + T V ++
Sbjct: 146 DSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKAC 205
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
A ++ + + +H L +K G + + ++L+ YGKC + A ++F+ ++N+N VSWN
Sbjct: 206 AGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWN 265
Query: 214 VIVRRYLVAGNGKEAVVMFFKML---REDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
++ G E +F ++L E + P T + AC+ + GM +HG+
Sbjct: 266 SVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLA 325
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
K+ + V SL +MY KCG L +AR L D +N++SW +I+ GY+ G R
Sbjct: 326 FKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVF 385
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
EL EM R+ +++VT+ +L C+G
Sbjct: 386 ELLQEM------------------------------QREEKVRVNEVTVLNVLPACSGEH 415
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ KE+HG+ R+ + + V+NA + Y KC +L A F M + + SWNA++
Sbjct: 416 QLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGM-EGKTVSSWNALI 474
Query: 451 TGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+A+ G +++ F M P +FT +LL ACA + L GK+IH F++RN E
Sbjct: 475 GAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLE 534
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
++ +L+ +Y +C + +F + + ++ N MI GF NE EAL+ F M
Sbjct: 535 LDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQM 594
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
GIKP I G+L AC ++L + S K + +I +Y + G
Sbjct: 595 LSGGIKPQEIAVTGVLGACSQVSALRLGKEVH-SFALKAHLSEDAFVTCALIDMYAKCGC 653
Query: 630 MKELEDFVNRM 640
M++ ++ +R+
Sbjct: 654 MEQSQNIFDRV 664
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 223/492 (45%), Gaps = 54/492 (10%)
Query: 107 DGGSWNA---MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
D G+ N +L ++ QNG ++ S +S I +LR+ + V +
Sbjct: 65 DSGNLNDALNLLHSHAQNG----------TVSSSDISKEAIGI--LLRACGHHKNIHVGR 112
Query: 164 QLHGLI-VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++H L+ +V+L + ++ Y C +D+R +FD + K+ +N ++ Y
Sbjct: 113 KVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRN 172
Query: 223 GNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
++A+ +F ++L D+ P NFT AC+ ++ G +H + +K D V
Sbjct: 173 ALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFV 232
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY KCG +E A ++F M RN+
Sbjct: 233 GNALIAMYGKCGFVESAV-------------------------------KVFETMRNRNL 261
Query: 342 ISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDI--DQVTLGLILNVCAGLSEIKMGKEV 398
+SWN+++ + + + E F L+ + + D T+ ++ CA + E++MG V
Sbjct: 262 VSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVV 321
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG + + + V+N+L+DMY KCG L AR F M+ ++ VSWN ++ GY++ G
Sbjct: 322 HGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTIIWGYSKEGD 380
Query: 459 SEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EMQ E R ++ T +L AC+ L K+IH + R+ + + +
Sbjct: 381 FRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVAN 440
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
A V Y KC L+ A RVF V N++I N ++L++F +M G+ P
Sbjct: 441 AFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDP 500
Query: 577 DHITFHGILLAC 588
D T +LLAC
Sbjct: 501 DRFTIGSLLLAC 512
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 23/193 (11%)
Query: 25 TLTKTISGHLKSDE-PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
T + +SG +K E V+ L A C+ A+ +++ S + + + F+
Sbjct: 590 TFRQMLSGGIKPQEIAVTGVLGA-----CSQVSALRLGKEVHSFALKAHLSEDAFVTCAL 644
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y KCG ++ ++ +FD + E+D WN ++ Y +G + +ELF M + G +
Sbjct: 645 IDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDS 704
Query: 144 ITYANVLRSS------AEELE-LGVSKQLHGLIVKRGFCGNVILE--SSLVDAYGKCMVM 194
T+ VL + E L+ LG + L+G+ K LE + +VD G+ +
Sbjct: 705 FTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPK--------LEHYACVVDMLGRAGQL 756
Query: 195 TDARRMFDDIQNK 207
T+A ++ +++ ++
Sbjct: 757 TEALKLVNEMPDE 769
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 196/660 (29%), Positives = 304/660 (46%), Gaps = 66/660 (10%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C +AI A+ L S ++ + +FLLN I Y KC DDAR LFDEMP R+ S+
Sbjct: 13 CGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSF 72
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSA--EELELGVSKQLHGL 168
M+ A+T +G P L L+ M S V NQ Y+ VL++ ++ELG+ H
Sbjct: 73 TTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVS 132
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+ F + +L ++L+D Y KC + DA+R+F +I KN+ SWN ++ + G ++A
Sbjct: 133 EARLEF--DTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDA 190
Query: 229 VVMFFKMLREDIRPLN------------------------------FTFANALFACSFLS 258
+F +M D+ N FTF AL AC L
Sbjct: 191 FNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLG 250
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QIH IIK E + SL +MY C L++A + D+
Sbjct: 251 ELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDK-------------- 296
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
N ++ WN+ML+GY + W AL + M + D T
Sbjct: 297 ---------------NSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYT 341
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ L VC +++ +VHG I Y + V + L+D+Y K GN+ SA F ++
Sbjct: 342 FSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLP 401
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
+ D V+W++++ G AR G + F +M + F +L ++++SL+ GK
Sbjct: 402 NK-DVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGK 460
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
QIH F ++ YE V AL ++Y KC +E A+ +F +D + +I+G N
Sbjct: 461 QIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNG 520
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
R +A+ + M + G KP+ IT G+L AC H G V+ A F S+ ++G+ P EHY
Sbjct: 521 RADKAISILHKMIESGTKPNKITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHY 580
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ ++ + G KE + +N MPF P + + D C L A L +P
Sbjct: 581 NCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSP 640
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 199/454 (43%), Gaps = 78/454 (17%)
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
AL C + +H +IIK+ +L S+ +Y KC R +DAR L D+ RN
Sbjct: 9 ALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRN 68
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
I+S+T++VS + SGR EA L+N M E + N
Sbjct: 69 IVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPN------------------------ 104
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
Q +L C + ++++G VH + + + NALLDMY KCG+L
Sbjct: 105 ------QFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMD 158
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWET---------- 473
A+ F+++ ++ SWN ++ G+A++G +A F +M W +
Sbjct: 159 AKRVFHEIPC-KNSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNAS 217
Query: 474 ---------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
+ FTF L AC + L G+QIHC +I++ E + C +L
Sbjct: 218 PHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSL 277
Query: 519 VEVYTKCCCLEYAIRVFKESSSL--DVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+++Y+ C L+ A+++F ++S L + + NSM+ G+ N AL + M G +
Sbjct: 278 IDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQF 337
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP----QLEHY--ECMIKLYCRYGYM 630
D TF L CI+ N++LA Q +G+I +L+H +I LY + G +
Sbjct: 338 DSYTFSIALKVCIYFDNLRLASQV-------HGLIITRGYELDHVVGSILIDLYAKQGNI 390
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
R+P N V + C + G TL
Sbjct: 391 NSALRLFERLP-NKDVVAWSSLIVGCARLGLGTL 423
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 10/237 (4%)
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D++Q+ L L C IK K +H I + S++IF+ N+++ +Y KC AR
Sbjct: 2 DLNQIQLAL--RCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDART 59
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANI 490
F +M R+ VS+ +++ + G+ EA+T ++ M +P++F + +L AC +
Sbjct: 60 LFDEMPH-RNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLV 118
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+E G +H V E + V AL+++Y KC L A RVF E + N++I
Sbjct: 119 GDVELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLI 178
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
LG R+A +F M +PD ++++ I +A + + ALQF M K
Sbjct: 179 LGHAKQGLMRDAFNLFDQMP----EPDLVSWNSI-IAGLADNASPHALQFLSMMHGK 230
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/651 (28%), Positives = 320/651 (49%), Gaps = 41/651 (6%)
Query: 46 AHLFQLC-----ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
A L Q C A + V AR ++ V T F N + Y K G L AR LF
Sbjct: 51 ARLLQRCIARGDARAGRAVHARVVQRGGVAQLDT---FCANVLLNLYAKLGPLAAARRLF 107
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D MPER+ S+ ++ Y G LF + G N +L+ G
Sbjct: 108 DGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPG 167
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
++ +H K G N + SSL+DAY C ++ AR +FD I K+AV+W +V Y
Sbjct: 168 LTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYS 227
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
++A+ F KM +P F + L A LSS G IHG +K + +
Sbjct: 228 ENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPH 287
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V G+L +MY KCG +EDAR + + ++I W+ ++S YA S + +A E+F M +
Sbjct: 288 VGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSS 347
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V+ ++ +L +L CA ++ + +G+++H
Sbjct: 348 VVP-------------------------------NEFSLSGVLQACANVAFLDLGQQIHN 376
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + Y S +FV NAL+D+Y KC N+ ++ + ++ + ++VSWN ++ GY + G +E
Sbjct: 377 LVIKLGYESELFVGNALMDVYAKCRNMENS-LEIFRSLRDANEVSWNTIIVGYCQSGFAE 435
Query: 461 EAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A++ F EM+ ++ TF ++L ACAN +S++ QIH + ++ + + + +L+
Sbjct: 436 DALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLI 495
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+ Y KC C+ A++VF+ DV+ N++I G+ + R +ALE+F M K KP+ +
Sbjct: 496 DTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDV 555
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF +L C G V L F+SM + I P ++HY C+++L R G + + F+
Sbjct: 556 TFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGD 615
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+P P+ + R + C + LG+++A ++ E+ P + + +N +
Sbjct: 616 IPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMY 666
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 199/400 (49%), Gaps = 25/400 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +SL + + Q CA+ + +++ + ++ +F+ N ++ Y KC N++++
Sbjct: 350 PNEFSL-SGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLE 408
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + + + SWN ++ Y Q+GF L +F +M + V + Q+T+++VLR+ A
Sbjct: 409 IFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTAS 468
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + Q+H LI K F + I+ +SL+D Y KC + DA ++F+ I + VSWN I+
Sbjct: 469 IKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISG 528
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII---KIDF 275
Y + G +A+ +F +M + D +P + TF L C +G+ + + +I
Sbjct: 529 YALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKP 588
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---REARE 331
D + + + GRL DA + D P + + W +++S + + + + E
Sbjct: 589 SMDHYT--CIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAE 646
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
E+ ++ ++ + Y + + LD V L+RK+ ++I G+ V GLS
Sbjct: 647 KVLEIEPQDETTYVLLSNMYAAAGI----LDQVALLRKSMRNI-----GVKKEV--GLSW 695
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+++ EVH F + ++ + NA+L+ NL+++R
Sbjct: 696 VEIKGEVHAFSVGSADHPDMRIINAMLEWL----NLKASR 731
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 294/603 (48%), Gaps = 35/603 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-- 135
F N + GNL AR +FD+MP RD SW A++ Y + LF M
Sbjct: 35 FDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVV 94
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
VS + + VL++ + + + LH VK +V + SSL+D Y + +
Sbjct: 95 DPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIE 154
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+ R+F ++ +NAV+W I+ + AG KE + F +M + FTFA AL AC+
Sbjct: 155 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACA 214
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G QIH +I F+ V SL MY +CG + D GL
Sbjct: 215 GLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRD--GLC------------- 259
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
LF M ER+V+SW +++ Y R ++A++ MR + +
Sbjct: 260 ----------------LFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPN 303
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T + + CA LS + G+++H + + ++ VSN+++ MY CG L SA + F
Sbjct: 304 EQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQ 363
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
M + RD +SW+ ++ GY++ G EEA FS M Q +P+ F +LL+ N++ LE
Sbjct: 364 GM-RCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLE 422
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+Q+H E N R L+ +Y+KC ++ A ++F+E+ D++ +MI G+
Sbjct: 423 GGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYA 482
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ + +EA+++F K G PD +TF +L AC H G + L +F+ M+ KY + P
Sbjct: 483 EHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAK 542
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CM+ L CR G + E E ++ M + + + C+ G G AA R+ E
Sbjct: 543 EHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 602
Query: 675 LNP 677
L+P
Sbjct: 603 LDP 605
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 246/531 (46%), Gaps = 44/531 (8%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S+ + + + C S I L + V VF+ + ++ Y + G ++ + +F E
Sbjct: 103 SVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSE 162
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP R+ +W A++ G L F +M+ S ++ T+A L++ A ++
Sbjct: 163 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYG 222
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+H ++ RGF V + +SL Y +C M D +F+++ ++ VSW ++ Y
Sbjct: 223 KQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRI 282
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G+ ++AV F KM + P TFA AC+ LS G Q+H + + V
Sbjct: 283 GHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVS 342
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
S+ +MY CG+L+ A L R+IISW++I+ GY+ +G EA + F
Sbjct: 343 NSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYF--------- 393
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SW MR++ L +L+V ++ ++ G++VH
Sbjct: 394 SW----------------------MRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALA 431
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
N V + L++MY KCGN++ A F + + R D VS A++ GYA G+S+EA
Sbjct: 432 FCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEE-TDRDDIVSLTAMINGYAEHGKSKEA 490
Query: 463 MTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEINVVCR--GAL 518
+ F + ++ P TF ++L AC + L+ G H F +++ Y + G +
Sbjct: 491 IDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLG--FHYFNLMQEKYNMRPAKEHYGCM 548
Query: 519 VEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHN----ERGREALE 564
V++ + L A ++ E S D ++ ++++ C ERGR A E
Sbjct: 549 VDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIA-CKAKGDIERGRRAAE 598
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 208/449 (46%), Gaps = 36/449 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA + + +++ ++++ V++ N Y +CG + D LF+ M
Sbjct: 206 FAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMS 265
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SW +++ AY + G + +E F+ M +S V N+ T+A + + A L +Q
Sbjct: 266 ERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQ 325
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH + G ++ + +S++ Y C + A +F ++ ++ +SW+ I+ Y AG
Sbjct: 326 LHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGF 385
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G+EA F M + +P +F A+ L ++ G Q+H + E + V +
Sbjct: 386 GEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRST 445
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KCG +++A + ++ D +I+S T++++GYA G+ +EA +LF +
Sbjct: 446 LINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK--------- 496
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL-ILNVCAGLSEIKMGKEVHGFIH 403
++ G++ +++ F+ ++ T Q+ LG N+ ++ KE +G
Sbjct: 497 -SLKVGFS-----PDSVTFISVLTACTHS-GQLDLGFHYFNLMQEKYNMRPAKEHYG--- 546
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++D+ + G L A +MS ++D V W +L +G E
Sbjct: 547 ------------CMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGR 594
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISS 492
+ +E E P T T L ANI S
Sbjct: 595 RA-AERILELDP---TCATALVTLANIYS 619
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 152/295 (51%), Gaps = 8/295 (2%)
Query: 301 LLDQPDERNIISWT----SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
LL++P E+ I T S + +G +R AR++F++MP R+++SW A++ GY +
Sbjct: 21 LLEKPVEKTIQVVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANN 80
Query: 357 WKEALDFVFLMRKTTKDI--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
EA+ MR + D + ++L C S I G+ +H + + S++FV
Sbjct: 81 SDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVG 140
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR 474
++LLDMY++ G + + F +M R+ V+W A++TG G+ +E +T FSEM
Sbjct: 141 SSLLDMYKRVGKIEKSCRVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEE 199
Query: 475 P-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
FTF L ACA + ++ GKQIH VI ++ V +L +YT+C + +
Sbjct: 200 LSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLC 259
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+F+ S DV+ S+I+ + +A+E F M+ + P+ TF + AC
Sbjct: 260 LFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSAC 314
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 193/684 (28%), Positives = 326/684 (47%), Gaps = 84/684 (12%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
++ + +T F+ N I+ Y K G L A+ +F+ + RD SW AM+ +QNG
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+ + LF + S + E E G KQLHGL++K+GF + +
Sbjct: 245 YEEEAMLLFCQIVLSACT------------KVEFFEFG--KQLHGLVLKQGFSSETYVCN 290
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+LV Y + ++ A ++F + ++ VS+N ++ G A+ +F KM + +P
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR--- 299
T A+ L AC+ + + G Q H IK D VV GSL ++YVKC ++ A
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 410
Query: 300 ---GLLDQPDER------------------------------------------------ 308
G LD ++
Sbjct: 411 LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQ 470
Query: 309 -NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
N+ + ++ YA G++ A ++F + E +V+SW AM+AGYT+ + EAL+ M
Sbjct: 471 FNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEM 530
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ D + ++ CAG+ + G+++H + YS ++ + NAL+ +Y +CG +
Sbjct: 531 QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKV 590
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAA 486
R A F Q+ +D VSWN++++G+A+ G EEA+ F++M + + FTF + ++A
Sbjct: 591 REAYAAFDQI-YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSA 649
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
ANI+++ GKQIH + + Y+ AL+ +Y KC ++D I
Sbjct: 650 AANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKC-------------GTIDDISW 696
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NSMI G+ + G EAL++F MK+ + P+H+TF G+L AC H G V + +F SM
Sbjct: 697 NSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSE 756
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+ ++P+ EHY C++ L R G + + FV MP P + R + C + +GE
Sbjct: 757 AHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGE 816
Query: 667 WAARRLNELNPWAPFQFKITTNRF 690
+AA L EL P + + +N +
Sbjct: 817 FAASHLLELEPKDSATYVLVSNMY 840
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/609 (25%), Positives = 273/609 (44%), Gaps = 73/609 (11%)
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
+ I+ Y G+L+ A +FDEMP R WN + + GR LF M V
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161
Query: 142 NQITYANVLRS-SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ +A VLR S + +Q+H + GF + + + L+D Y K ++ A+++
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F++++ +++VSW ++ G +EA+++F +++ L AC+ +
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEFF 267
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G Q+HG+++K F + V +L +Y + G L A + +R+ +S+ S++SG
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327
Query: 321 AISGRIREARELFNEM-------------------------PERNVISWNAMLAGYTRSL 355
A G I A LF +M P A+ AG T +
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387
Query: 356 LWKEAL----------------------------DFVFLMRKTTKDI--DQVTLGLILNV 385
+ + +L F + + I +Q T IL
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKT 447
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C L +G+++H + + + N++VS+ L+DMY K G L A F ++ + D VS
Sbjct: 448 CTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE-NDVVS 506
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W A++ GY + + EA+ F EMQ + + F + ++ACA I +L+QG+QIH
Sbjct: 507 WTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSC 566
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ Y ++ ALV +Y +C + A F + + D + NS++ GF + EAL
Sbjct: 567 LSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALN 626
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+F M K G++ + TF + A + NV++ Q +R K G + E +I LY
Sbjct: 627 IFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIR-KTGYDSETEVSNALITLY 685
Query: 625 CRYGYMKEL 633
+ G + ++
Sbjct: 686 AKCGTIDDI 694
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 211/452 (46%), Gaps = 61/452 (13%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L CAS A+ ++ S + T + + ++ Y KC ++ A F
Sbjct: 356 ASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF----- 410
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
Y Q ++ ++F M G+ NQ TY ++L++ + +Q+
Sbjct: 411 ----------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI 460
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++K GF NV + S L+D Y K + A ++F ++ + VSW ++ Y
Sbjct: 461 HTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKF 520
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ +F +M + I+ N FA+A+ AC+ + + +G QIH + D + +L
Sbjct: 521 TEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNAL 580
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y +CG++ +A DQ ++ +SW S+VSG+A SG EA +F +
Sbjct: 581 VSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQ---------- 630
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M K +I+ T G ++ A ++ +++GK++HG I +
Sbjct: 631 ---------------------MNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKT 669
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y S VSNAL+ +Y KCG + D +SWN+++TGY++ G EA+
Sbjct: 670 GYDSETEVSNALITLYAKCGTI--------------DDISWNSMITGYSQHGCGFEALKL 715
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F +M Q + P+ TF +L+AC+++ +++G
Sbjct: 716 FEDMKQLDVLPNHVTFVGVLSACSHVGLVDEG 747
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 16/332 (4%)
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+ R+ ++ Y G + A +F+EMP R++ WN + + L
Sbjct: 93 NSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFR 152
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLS-EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M + D+ ++L C+G + + +++H + + S+ F+ N L+D+Y K
Sbjct: 153 RMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKN 212
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLL 484
G L SA+ F + + RD VSW A+++G ++ G EEAM F ++ +L
Sbjct: 213 GFLSSAKKVFENL-KARDSVSWVAMISGLSQNGYEEEAMLLFCQI-------------VL 258
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+AC + E GKQ+H V++ + ALV +Y++ L A ++F S D +
Sbjct: 259 SACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV 318
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
NS+I G AL +F M + KPD +T +L AC G + Q F S
Sbjct: 319 SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSY 377
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
K G+ + ++ LY + +K +F
Sbjct: 378 AIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 409
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/651 (28%), Positives = 323/651 (49%), Gaps = 34/651 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A + A++ A +E R++ + V VF+ + I Y KCG + DA +FD
Sbjct: 201 STFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDC 260
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
E++ WNAML +N + +++FL M G+ A++ TY +VL + A +
Sbjct: 261 SGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLG 320
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+ + +K ++ + ++ +D + K + DA+ +F+ I K+ VSWN ++
Sbjct: 321 RQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHN 380
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+EA+ M M + + P +FA + ACS + + G QIH + +K + V
Sbjct: 381 EEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVG 440
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL + Y K G +E R +L Q D +I+ +++G + R EA +LF +
Sbjct: 441 SSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQ------- 493
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
++R K T IL+ C GL +GK+VH +
Sbjct: 494 -----------------------VLRDGLKP-SSFTFSSILSGCTGLLSSIIGKQVHCYT 529
Query: 403 HRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
++ + + + V +L+ Y K A +M ++ V W A+++GYA+ G S +
Sbjct: 530 LKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQ 589
Query: 462 AMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
++ SF M+ ++ P + TF ++L AC+ +++L GK+IH +I++ + A+++
Sbjct: 590 SLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIID 649
Query: 521 VYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y+KC + + FKE S D+ + NSMILGF N EAL +F M+ IK D +
Sbjct: 650 MYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEV 709
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF G+L+AC H G + +FDSM YGI+P+++HY C I L R G+++E ++ +N
Sbjct: 710 TFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINE 769
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+PF P + CR + GE AA+ L EL P + + +N +
Sbjct: 770 LPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMY 820
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 237/503 (47%), Gaps = 37/503 (7%)
Query: 91 GNLDDARGLFDEMPERDGG-SWNAMLGAYTQ-NGFPGRTLELFLDMNHSGVSANQITYAN 148
G L+DAR L MP +WNA++ Y Q +G L+ DM G+ + T+A+
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L ++A +Q+H V+ G NV + SSL++ Y KC + DA +FD KN
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKN 265
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V WN ++ + EA+ MF M R + FT+ + L AC+ L S G Q+
Sbjct: 266 VVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQC 325
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
V IK + V + +M+ K G ++DA+ L
Sbjct: 326 VTIKNCMDASLFVANATLDMHSKFGAIDDAKTL--------------------------- 358
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
FN + ++ +SWNA+L G T + +EA+ + M D+V+ ++N C+
Sbjct: 359 ----FNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSN 414
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+ + GK++H ++ SN V ++L+D Y K G++ S R Q+ V N
Sbjct: 415 IRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDA-SSIVPRNV 473
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ G + + +EA+ F ++ + +PS FTF ++L+ C + S GKQ+HC+ +++
Sbjct: 474 LIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSG 533
Query: 508 YEINVVCRG-ALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEV 565
+ + G +LV Y K E A ++ E +++ +++ G+ N ++L
Sbjct: 534 FLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLS 593
Query: 566 FGLMKKEGIKPDHITFHGILLAC 588
F M+ + PD +TF IL AC
Sbjct: 594 FWRMRSYDVHPDEVTFASILKAC 616
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 46/449 (10%)
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+RP F A L ACS L + G Q H K +L MY +CGR+ DAR
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PER-------------- 339
+ + + W S++SGY +GR +EA LF M P+R
Sbjct: 87 RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146
Query: 340 ----------------NVISWNAMLAGYTR-SLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+ ++WNA+++GY + S + E MR + T +
Sbjct: 147 RLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASM 206
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ A + G++VH R+ +N+FV ++L+++Y KCG + A I + S ++
Sbjct: 207 LSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDA-ILVFDCSGEKN 265
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHC 501
V WNA+L G R EA+ F M+ +FT+ ++L ACA++ S G+Q+ C
Sbjct: 266 VVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQC 325
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+NC + ++ A +++++K ++ A +F + D + N++++G HNE E
Sbjct: 326 VTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEE 385
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYE 618
A+ + M +G+ PD ++F ++ AC N++ A + + C K+ I
Sbjct: 386 AIHMLKGMNLDGVTPDEVSFATVINAC---SNIR-ATETGKQIHCLAMKHSICSNHAVGS 441
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+I Y ++G ++ + ++ + VP
Sbjct: 442 SLIDFYSKHGDVESCRKVLAQVDASSIVP 470
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 184/629 (29%), Positives = 299/629 (47%), Gaps = 34/629 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + C + + E KL + + V + N I Y +CG+L +AR +FD +
Sbjct: 305 FASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLR 364
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ +WNAM+ Y + G LF M G ++ TYA++L A+ +L K+
Sbjct: 365 SLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKE 423
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I G+ ++ + ++L+ Y KC +AR++F+ + +N +SWN +
Sbjct: 424 LHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDL 483
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
GKEA F +M R+D+ P + TF L +C+ G IHG I + ++ V +
Sbjct: 484 GKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANA 543
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY +CG L DA RE+F + R++ SW
Sbjct: 544 LISMYGRCGNLADA-------------------------------REVFYRIRRRDLGSW 572
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NAM+A + A D R D+ T +L A L ++ G+ +HG + +
Sbjct: 573 NAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEK 632
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +I V L+ MY KCG+LR A F + Q +D V WNA+L YA + ++A+
Sbjct: 633 GGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTV-QEKDVVCWNAMLAAYAHSDRGQDALK 691
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +MQ E P T+ T L ACA ++++E GK+IH + E + +L+E+Y+
Sbjct: 692 LFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYS 751
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
+C CL A +VF++ S D+ N++I G+C N +G ALE + LM + I P+ TF
Sbjct: 752 RCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTS 811
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
IL + G + A F +S++ ++ + P +HY M+ R G +KE E+F+ +
Sbjct: 812 ILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAE 871
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRL 672
M + CR + L E A L
Sbjct: 872 SAALMWESLLVACRIHLNVELAETAVEHL 900
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/629 (27%), Positives = 308/629 (48%), Gaps = 51/629 (8%)
Query: 18 PKPTPSKTLTKTISGHL----KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYP 73
PK K+I G + K + + YA Q C +K++ E +K+ ++ +
Sbjct: 72 PKIVRDTREGKSIKGAVQLLGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQF 131
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
P ++L N I Y KCG+++DA +F M ++D SWNAM+ Y +G +LF
Sbjct: 132 KPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQ 191
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G+ NQ T+ ++L + + L +Q+H I K G+ +V + ++L++ Y KC
Sbjct: 192 MQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGS 251
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ AR++F++++ +N VSW ++ Y+ G+ +EA+ +F K++R I+P +FA+ L A
Sbjct: 252 LELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGA 311
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ + EG+++H I + E + +V +L MY +CG L +AR + D N +W
Sbjct: 312 CTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTW 371
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
++++GY G + EA LF M ++
Sbjct: 372 NAMIAGYG-EGLMEEAFRLFRAMEQKGF-------------------------------Q 399
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+ T +L +CA +++ GKE+H I + +++ V+ AL+ MY KCG+ AR
Sbjct: 400 PDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKV 459
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISS 492
F QM + R+ +SWNA ++ R +EA +F +M+ + P TF TLL +C +
Sbjct: 460 FNQMPE-RNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPED 518
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
LE+G+ IH + + N AL+ +Y +C L A VF D+ N+MI
Sbjct: 519 LERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAA 578
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ A ++F + EG K D TF +L A + L+ D+ R +G++
Sbjct: 579 NVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVAN-------LEDLDAGRMIHGLVE 631
Query: 613 Q------LEHYECMIKLYCRYGYMKELED 635
+ + +IK+Y + G +++ E+
Sbjct: 632 KGGFGKDIRVLTTLIKMYSKCGSLRDAEN 660
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 255/504 (50%), Gaps = 35/504 (6%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV AN YA L+ L K++H + F ++ L + L+ Y KC + DA
Sbjct: 95 GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F +++K+ VSWN ++ Y + G +EA +F++M RE ++P TF + L AC
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSP 214
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G QIH I K +E D V +L MY KCG LE AR + ++ ERN++SWT+++
Sbjct: 215 IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 274
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGY G REA LF ++ + ++V
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGI-------------------------------QPNKV 303
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+ IL C +++ G ++H +I + + V NAL+ MY +CG+L +AR F +
Sbjct: 304 SFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNL 363
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
+ ++ +WNA++ GY G EEA F M+ + +P KFT+ +LLA CA+ + L++G
Sbjct: 364 -RSLNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRG 421
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K++H + ++ ++ AL+ +Y KC E A +VF + +VI N+ I C +
Sbjct: 422 KELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRH 481
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
+ G+EA + F M+++ + PDHITF +L +C +++ ++ ++G++
Sbjct: 482 DLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERG-RYIHGKINQWGMLSNNHV 540
Query: 617 YECMIKLYCRYGYMKELEDFVNRM 640
+I +Y R G + + + R+
Sbjct: 541 ANALISMYGRCGNLADAREVFYRI 564
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 182/635 (28%), Positives = 308/635 (48%), Gaps = 33/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y LFQ C + +++ +++ ++ LN I+ + CGN+ +AR FD +
Sbjct: 64 YVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVE 123
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ +WNA++ Y Q G LF M + + IT+ VL + + L + K+
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKE 183
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H ++K GF + + ++LV Y K M AR++FD + ++ ++NV++ Y +G+
Sbjct: 184 FHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGD 243
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G++A +F++M +E +P +F + L CS + G +H + D V +
Sbjct: 244 GEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATA 303
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+ CG +E A R +F++M R+V+SW
Sbjct: 304 LIRMYMGCGSIEGA-------------------------------RRVFDKMKVRDVVSW 332
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M+ GY + ++A M++ D++T I+N CA +++ + +E+H + R
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVR 392
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +++ V AL+ MY KCG ++ AR F MS RRD VSW+A++ Y G EEA
Sbjct: 393 AGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS-RRDVVSWSAMIGAYVENGCGEEAFE 451
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
+F M+ P T+ LL AC ++ +L+ G +I+ I+ ++ AL+ +
Sbjct: 452 TFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNV 511
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K +E A +F+ DV+ N MI G+ + REAL++F M KE +P+ +TF G
Sbjct: 512 KHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVG 571
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC G V+ +FF + GI+P +E Y CM+ L R G + E E +NRMP
Sbjct: 572 VLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLK 631
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
P + + CR G + E AA R P+
Sbjct: 632 PNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPY 666
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 262/565 (46%), Gaps = 69/565 (12%)
Query: 138 GVSANQI---TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G +N I TY + + + G+ KQ+ I++ G N+ ++L+ + C M
Sbjct: 53 GEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNM 112
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
+AR+ FD ++NK V+WN I+ Y G+ KEA +F +M+ E + P TF L AC
Sbjct: 113 LEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDAC 172
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S + G + H +IK+ F D + +L MYVK G ++ AR + D +R++ ++
Sbjct: 173 SSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFN 232
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++ GYA SG +A +LF + M++
Sbjct: 233 VMIGGYAKSGDGEKAFQLF-------------------------------YRMQQEGFKP 261
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
++++ IL+ C+ + GK VH ++ V+ AL+ MY CG++ AR F
Sbjct: 262 NRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVF 321
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M + RD VSW ++ GYA E+A F+ MQ E +P + T+ ++ ACA+ + L
Sbjct: 322 DKM-KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADL 380
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
++IH V+R + +++ ALV +Y KC ++ A +VF S DV+ ++MI +
Sbjct: 381 SLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAY 440
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD----------- 602
N G EA E F LMK+ ++PD +T+ +L AC H G + L ++ +
Sbjct: 441 VENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHI 500
Query: 603 -------SMRCKYGIIPQLEH------------YECMIKLYCRYGYMKELEDFVNRM--- 640
+M K+G I + + + MI Y +G +E D +RM
Sbjct: 501 PVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE 560
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLG 665
F P + C + G+ G
Sbjct: 561 RFRPNSVTFVGVLSACSRAGFVEEG 585
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 232/471 (49%), Gaps = 35/471 (7%)
Query: 37 DEPVSYSLYAHLFQL--CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
DE + S+ L L C+S + ++ + ++ + + Y K G++D
Sbjct: 155 DEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMD 214
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
AR +FD + +RD ++N M+G Y ++G + +LF M G N+I++ ++L +
Sbjct: 215 GARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L K +H + G +V + ++L+ Y C + ARR+FD ++ ++ VSW V
Sbjct: 275 TPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTV 334
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++R Y N ++A +F M E I+P T+ + + AC+ + +IH +++
Sbjct: 335 MIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG 394
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
F D +V +L MY KCG ++DAR + D R+++SW++++ Y +G EA E F+
Sbjct: 395 FGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFH 454
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
LM++ + D VT +LN C L + +
Sbjct: 455 -------------------------------LMKRNNVEPDVVTYINLLNACGHLGALDL 483
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G E++ + D S+I V NAL++M K G++ AR F M Q RD V+WN ++ GY+
Sbjct: 484 GMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQ-RDVVTWNVMIGGYS 542
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVI 504
G + EA+ F M E RP+ TF +L+AC+ +E+G++ +++
Sbjct: 543 LHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLL 593
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 143/291 (49%), Gaps = 9/291 (3%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A D + + + + ID T + C L + +GK+V I ++ NI+ N L+
Sbjct: 45 ANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIK 104
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKF 478
++ CGN+ AR F + + + V+WNA++ GYA+ G +EA F +M E PS
Sbjct: 105 LHSICGNMLEARQTFDSV-ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSII 163
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF +L AC++ + L+ GK+ H VI+ + + ALV +Y K ++ A +VF
Sbjct: 164 TFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL 223
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
DV N MI G+ + G +A ++F M++EG KP+ I+F IL C + AL
Sbjct: 224 YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGC----STPEAL 279
Query: 599 QFFDSMRCK---YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ ++ + G++ + +I++Y G ++ ++M V
Sbjct: 280 AWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVV 330
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 181/602 (30%), Positives = 308/602 (51%), Gaps = 37/602 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + S + L Q ++++ + + L + ++ + V++ N + Y KC L +A+
Sbjct: 4 PSNRSFFTALLQY-THNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKF 61
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRT--LELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ + +D SWN ++ Y+Q+G G + +ELF M + N T+A V +++
Sbjct: 62 VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 121
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
++ + H + +K C +V + SSL++ Y K + +AR++FD + +N+VSW ++
Sbjct: 122 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 181
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y EA+ +F M RE+ F F + L A + G QIH + +K
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L MY KCG L+D A + F
Sbjct: 242 SIVSVGNALVTMYAKCGSLDD-------------------------------ALQTFETS 270
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++N I+W+AM+ G +S +AL M + + T ++N C+ L GK
Sbjct: 271 SDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGK 330
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+VH ++ + + S I+V AL+DMY KC ++ AR F + Q D V W +++ GY +
Sbjct: 331 QVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYL-QEPDIVLWTSMIGGYVQN 389
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G++E+A++ + M+ E P++ T ++L AC+++++LEQGKQIH ++ + + V
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL +Y KC CL+ VF+ + DVI N+MI G N G+EALE+F M+ EG K
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTK 509
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD++TF IL AC H G V+ +F M ++G+ P++EHY CM+ + R G +KE +
Sbjct: 510 PDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIE 569
Query: 636 FV 637
F
Sbjct: 570 FT 571
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 239/482 (49%), Gaps = 37/482 (7%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K LH I+K V + +SLV+ Y KC + +A+ +F+ IQNK+ VSWN I+ Y
Sbjct: 26 KALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQH 84
Query: 223 GNGKEAVVM--FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G + VM F +M E+ P TFA A S L G H V IK+D D
Sbjct: 85 GPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVF 144
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V SL MY K +G EAR++F+ MPERN
Sbjct: 145 VGSSLMNMYCK-------------------------------AGLTPEARKVFDTMPERN 173
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+SW M++GY L EAL LMR+ + ++ +L+ + GK++H
Sbjct: 174 SVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHC 233
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+N S + V NAL+ MY KCG+L A + ++ S ++ ++W+A++TG A+ G S+
Sbjct: 234 IAVKNGLLSIVSVGNALVTMYAKCGSLDDA-LQTFETSSDKNSITWSAMITGXAQSGDSD 292
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A+ FS M RPS+FTF ++ AC+++ + +GKQ+H ++++ +E + ALV
Sbjct: 293 KALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALV 352
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC + A + F D+++ SMI G+ N +AL ++G M+ EGI P+ +
Sbjct: 353 DMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNEL 412
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
T +L AC ++ Q + KYG ++ + +Y + G +K+ R
Sbjct: 413 TMASVLKACSSLAALEQGKQIH-ARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRR 471
Query: 640 MP 641
MP
Sbjct: 472 MP 473
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 1/234 (0%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K L S HL P ++ + + C+ A E +++ L+ ++++
Sbjct: 293 KALKLFSSMHLSGIRPSEFT-FVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTAL 351
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KC ++ DAR FD + E D W +M+G Y QNG L L+ M G+ N+
Sbjct: 352 VDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNE 411
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T A+VL++ + L KQ+H VK GF V + S+L Y KC + D +F
Sbjct: 412 LTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRR 471
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+ ++ +SWN ++ G GKEA+ +F +M E +P TF N L ACS +
Sbjct: 472 MPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHM 525
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
T PS +F T L + SL++GK +H +I++ V +LV +Y KC L A
Sbjct: 2 TLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAK 60
Query: 533 RVFKESSSLDVIICNSMILGFC-HNERG-REALEVFGLMKKEGIKPDHITFHGILLAC-- 588
VF+ + DV+ N +I G+ H G +E+F M+ E P+ TF G+ A
Sbjct: 61 FVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120
Query: 589 -IHEGNVKLALQFFDSM-RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ +LA M C+ + ++ +YC+ G E + MP +V
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGS-----SLMNMYCKAGLTPEARKVFDTMPERNSV 175
Query: 647 PMLRKIFDKCRKNGYAT 663
I +GYA+
Sbjct: 176 SWATMI------SGYAS 186
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 174/596 (29%), Positives = 301/596 (50%), Gaps = 37/596 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y K G L AR +FDEM +RD W AM+G Y++ G G L +M G+ +
Sbjct: 88 VNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSP 147
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T+ +L +E +L + LH + GF ++ + +S+++ Y KC + DA+ +FD
Sbjct: 148 VTFLEMLSGISEITQL---QCLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQ 204
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++ ++ VSWN ++ + N E + + ++M + +RP TF +L + G
Sbjct: 205 MEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+H I+ F+GD + +L MY+KCG E + +L+ +++++ WT ++SG
Sbjct: 265 RMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRL 324
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
GR +A +F+EM + D+ + ++
Sbjct: 325 GRAEKALIVFSEMLH-------------------------------SGSDLSSEAIASVV 353
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA L +G VHG++ R Y+ + N+ + MY KCG+L + I F +M++ RD
Sbjct: 354 ASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNE-RDL 412
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHC 501
VSWNA+++G+A+ G +A+ F EM+++T + T +LL AC++ +L G+ IHC
Sbjct: 413 VSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHC 472
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
VIR+ + ALV++Y+KC LE A R F + DV+ ++I G+ + +G
Sbjct: 473 IVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDI 532
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
ALE++ G+KP+H+ F +L +C H G V+ L+ F SM +G+ P EH C++
Sbjct: 533 ALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L CR +++ F P++ +L I D NG + + R + EL P
Sbjct: 593 DLLCRAKRVEDAFKFYKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIELKP 648
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 236/473 (49%), Gaps = 36/473 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ ++N + Y KC + DA+ LFD+M +RD SWN M+ + L+L M
Sbjct: 179 IAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRD 238
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ +Q T+ L S +L + + LH IV GF G++ L ++L+ Y KC
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEA 298
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ R+ + I +K+ V W V++ + G ++A+++F +ML + A+ + +C+
Sbjct: 299 SYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQ 358
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G +HG +++ + D L S MY KCG L+ + L ++ +ER+++SW +I
Sbjct: 359 LGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAI 418
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG+A G + +A LF EM KT + +D
Sbjct: 419 ISGHAQHGDLCKALLLFEEMK------------------------------FKTVQQVDS 448
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T+ +L C+ + +G+ +H + R+ V AL+DMY KCG L +A+ F
Sbjct: 449 LTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNS 508
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQ 495
++ +D VSW ++ GY G+ + A+ +SE + + +P+ F +L++C++ ++Q
Sbjct: 509 ITW-KDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQ 567
Query: 496 GKQIHCFVIRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKES---SSLDVI 544
G +I ++R+ E N +V++ + +E A + +KE+ S+DV+
Sbjct: 568 GLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSIDVL 620
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 258/540 (47%), Gaps = 42/540 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQLHGL 168
+N+ + + +G + L F M + + + T+ ++L+ +S + L G+S +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLS--IHQK 71
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++ GF + + SSLV+ Y K ++ AR++FD++++++ V W ++ Y AG EA
Sbjct: 72 VLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEA 131
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +M + I+P TF L S +S + +H + FE D V+ S+ +
Sbjct: 132 CSLVKEMRFQGIKPSPVTFLEML---SGISEITQLQCLHAFALVYGFECDIAVMNSMLNL 188
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KC R+ DA+ L DQ ++R+++SW +++SG+A +
Sbjct: 189 YCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANM---------------------- 226
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
E L ++ MR DQ T G L+V + +++MG+ +H I +
Sbjct: 227 ---------SEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFD 277
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++ + AL+ MY KCG A + +D V W +++G R G++E+A+ FSE
Sbjct: 278 GDMHLRTALITMYLKCGE-EEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 469 M-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M + S +++A+CA + S + G +H +V+R Y ++ + + +Y KC
Sbjct: 337 MLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGH 396
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP-DHITFHGILL 586
L+ ++ +F+ + D++ N++I G + +AL +F MK + ++ D +T +L
Sbjct: 397 LDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQ 456
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC G + + + + + I P ++ +Y + GY++ + N + + V
Sbjct: 457 ACSSAGALPVG-RMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVV 515
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 186/394 (47%), Gaps = 18/394 (4%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y KCG + + + + +P++D W M+ + G + L +F +M HSG +
Sbjct: 287 ITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSS 346
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
A+V+ S A+ + +HG ++++G+ + +S + Y KC + + +F+
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFER 406
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYE 262
+ ++ VSWN I+ + G+ +A+++F +M + ++ ++ T + L ACS +
Sbjct: 407 MNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPV 466
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G IH ++I+ +V +L +MY KCG LE A+ + ++++SW ++++GY
Sbjct: 467 GRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGF 526
Query: 323 SGRIREARELFNE-----MPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQ 376
G+ A E+++E M +VI + A+L+ + + + ++ L F ++R + +
Sbjct: 527 HGKGDIALEIYSEFLHFGMKPNHVI-FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNH 585
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
L ++++ L K ++ F N +I V +LD G I
Sbjct: 586 EHLACVVDL---LCRAKRVEDAFKFYKENFTRPSIDVLGIILDASHANGKTEVEDIIC-- 640
Query: 437 MSQRRDKVSWNAVLTG-YARRGQSEEAMTSFSEM 469
RD + V G Y R G S AM + ++
Sbjct: 641 ----RDMIELKPVDAGHYVRLGHSFAAMKRWDDV 670
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
K+ + V L Q C+S+ A+ R + ++ + P + ++ Y KCG L
Sbjct: 440 FKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYL 499
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+ A+ F+ + +D SW ++ Y +G LE++ + H G+ N + + VL S
Sbjct: 500 EAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSC 559
Query: 154 AE 155
+
Sbjct: 560 SH 561
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/633 (29%), Positives = 309/633 (48%), Gaps = 36/633 (5%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
V AR ++ V T F N + Y K G L AR LFD MPER+ S+ ++ Y
Sbjct: 67 VHARVVQRGGVAQLDT---FCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY 123
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
G LELF + G N +L+ G++ +H K G N
Sbjct: 124 ALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNA 183
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++L+DAY C + AR +FD I K+AV+W +V Y + A+ F KM
Sbjct: 184 FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMT 243
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+P F +AL A LSS G IHG +K ++ + V G+L +MY KCG +EDA
Sbjct: 244 GFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDA 303
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ + ++I W+ ++S YA S + +A E+F M V+
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP--------------- 348
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
++ +L +L CA ++ +++G+++H + Y S +FV NAL+
Sbjct: 349 ----------------NEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM 392
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSK 477
DMY KC N+ ++ F + Q ++VSWN ++ GY + G +E+A++ F EM+ ++
Sbjct: 393 DMYAKCRNMENSLEIFSSL-QDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQ 451
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
TF ++L ACAN SS++ QIH + ++ + + + +L++ Y KC + A++VF+
Sbjct: 452 VTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFES 511
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
DV+ NS+I + + R ALE+F M K IK + +TF +L C G V
Sbjct: 512 IVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQG 571
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
L F+SM + I P +EHY C+++L R G + + F+ +P P+ + R + C
Sbjct: 572 LWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCV 631
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ LG +AA ++ ++ P + + +N +
Sbjct: 632 VHKNVALGRYAAEKVLDIEPHDETTYVLLSNMY 664
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 173/341 (50%), Gaps = 1/341 (0%)
Query: 1 MAGNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVE 60
+ G A ++S S P L + +P + L + L S A++
Sbjct: 209 IVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLG 268
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
++ T Y T P + ++ Y KCG+++DA +F+ +P D W+ ++ Y Q
Sbjct: 269 KGIHGCSVKTLYDTEP-HVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQ 327
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
+ + E+FL M S V N+ + + VL++ A L + +Q+H L +K G+ + +
Sbjct: 328 SCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFV 387
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
++L+D Y KC M ++ +F +Q+ N VSWN I+ Y +G ++A+ +F +M +
Sbjct: 388 GNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHM 447
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
TF++ L AC+ SS +QIH +I K F D +V SL + Y KCG + DA
Sbjct: 448 LSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALK 507
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ + E +++SW SI+S YA+ GR A ELF+ M + ++
Sbjct: 508 VFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDI 548
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 195/402 (48%), Gaps = 29/402 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +SL + + Q CA+ + ++ + + +F+ N ++ Y KC N++++
Sbjct: 348 PNEFSL-SGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLE 406
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + + + SWN ++ Y Q+GF L +F +M + + + Q+T+++VLR+ A
Sbjct: 407 IFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSS 466
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + Q+H LI K F + I+ +SL+D Y KC + DA ++F+ I + VSWN I+
Sbjct: 467 IKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISA 526
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-----IKI 273
Y + G A+ +F +M + DI+ + TF + L C +G+ + + IK
Sbjct: 527 YALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKP 586
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---REA 329
E ++ + + GRL DA + D P + + W +++S + + R A
Sbjct: 587 SMEHYTCIV----RLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYA 642
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
E ++ + ++ + Y + + LD V L RK+ +++ + AGL
Sbjct: 643 AEKVLDIEPHDETTYVLLSNMYAAAGI----LDEVALWRKSMRNVG-------VKKEAGL 691
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
S +++ EVH F + ++ + NA+L+ NL+++R
Sbjct: 692 SWVEIKGEVHAFSVGSADHPDMRIINAMLEWL----NLKASR 729
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/617 (29%), Positives = 305/617 (49%), Gaps = 34/617 (5%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P L + + Y KC +L AR + +EMP +D WN L + ++LF M
Sbjct: 22 PDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLM 81
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
H+ + NQ +A+++ ++A + + +H + K GF ++++ ++ V Y K +
Sbjct: 82 RHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSV 141
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
+ + F + +N S N ++ + + + ++L E P +TF + L C
Sbjct: 142 ENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTC 201
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ EG IHG +IK D + SL +Y KCG A + + ER+++SWT
Sbjct: 202 ASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWT 261
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++++G+ G R +FN+M + G+ ++ + F+
Sbjct: 262 ALITGFVAEGYGSGLR-IFNQM----------LAEGFNPNM-------YTFIS------- 296
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
IL C+ LS++ +GK+VH I +N N FV AL+DMY K L A F
Sbjct: 297 -------ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF 349
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
++ +RD +W ++ GYA+ GQ E+A+ F +MQ E +P++FT + L+ C+ I++L
Sbjct: 350 NRLI-KRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 408
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ G+Q+H I+ ++ ALV++Y KC C+E A VF S D + N++I G+
Sbjct: 409 DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGY 468
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ +G +AL+ F M EG PD +TF G+L AC H G ++ + F+S+ YGI P
Sbjct: 469 SQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPT 528
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+EHY CM+ + R G E+E F+ M V + + C+ +G GE AA +L
Sbjct: 529 IEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLF 588
Query: 674 ELNPWAPFQFKITTNRF 690
EL P + + +N F
Sbjct: 589 ELEPEIDSNYILLSNMF 605
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 208/458 (45%), Gaps = 47/458 (10%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP Y+ + + + CAS + E + + ++ P L N + Y KCG+ + A
Sbjct: 188 EPNMYT-FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 246
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F E+PERD SW A++ + G+ G L +F M G + N T+ ++LRS +
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 305
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++ + KQ+H IVK GN + ++LVD Y K + DA +F+ + ++ +W VIV
Sbjct: 306 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G G++AV F +M RE ++P FT A++L CS +++ G Q+H + IK G
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V +L +MY KCG +EDA + D R+ +SW +I+ GY+ G+ +A + F M
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + D+VT +L+ C+ + I+ GK+
Sbjct: 486 DEGTVP-------------------------------DEVTFIGVLSACSHMGLIEEGKK 514
Query: 398 VHGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
H N S ++ ++D+ + G + +M + + W VL
Sbjct: 515 -----HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLG 569
Query: 452 GYARRGQ---SEEAMTSFSEMQWETRPSKFTFETLLAA 486
G E A E++ E + + AA
Sbjct: 570 ACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAA 607
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 225/483 (46%), Gaps = 43/483 (8%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG--- 225
++K G C + L SSLV+ Y KC + AR++ +++ ++ WN + L + N
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWN----QKLSSANSPYP 70
Query: 226 -KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EAV +F+ M IR F FA+ + A + L + G IH + K FE D ++ +
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
MY+K +E+ W + F M N+ S
Sbjct: 131 FVTMYMKTQSVENG--------------W-----------------QFFKAMMIENLASR 159
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
N +L+G+ + + + + + + T IL CA ++ GK +HG + +
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIK 219
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + + + N+L+++Y KCG+ A F ++ + RD VSW A++TG+ G +
Sbjct: 220 SGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE-RDVVSWTALITGFVAEGYG-SGLR 277
Query: 465 SFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F++M E P+ +TF ++L +C+++S ++ GKQ+H +++N + N ALV++Y
Sbjct: 278 IFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYA 337
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K LE A +F D+ ++ G+ + +G +A++ F M++EG+KP+ T
Sbjct: 338 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 397
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
L C + Q SM K G + ++ +Y + G +++ E + +
Sbjct: 398 SLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR 456
Query: 644 PTV 646
TV
Sbjct: 457 DTV 459
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/650 (28%), Positives = 316/650 (48%), Gaps = 37/650 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTF--YPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
YA L Q C + R + ++V +F N + Y K G A +FD
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDG 490
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+PER+ S+ ++ + G LF + G NQ VL+ LG++
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+H K G N + S+L+DAY C V++DARR+FD I K+AV+W +V Y
Sbjct: 551 WGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCY-SE 609
Query: 223 GNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ E + F +R + LN F + L A LSS G IH +K ++ + V
Sbjct: 610 NDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHV 669
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
G+L +MY KCG +ED AR F + +V
Sbjct: 670 YGALLDMYAKCGNIED-------------------------------ARLAFEMVTNDDV 698
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
I W+ M++ Y + ++A + M +++ ++ +L +L CA + + +GK++H
Sbjct: 699 ILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNH 758
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + S +FV NAL+D+Y KC ++ S+ F + + ++VSWN ++ GY++ G E
Sbjct: 759 AIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSL-RDVNEVSWNTIIVGYSKSGFGEA 817
Query: 462 AMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A++ F EM+ + PS + T+ ++L ACA+ +S+ Q+HC + ++ + + + +L++
Sbjct: 818 ALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLID 877
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
Y KC C+ A +F+ D++ N++I G+ + + A E+F +M K IK + IT
Sbjct: 878 SYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDIT 937
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L C G V L FDSMR +GI P +EHY C+++L R G + + +F+ +
Sbjct: 938 FVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDI 997
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P P+ + R + C + LG ++A ++ E+ P + + +N +
Sbjct: 998 PSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMY 1047
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 193/408 (47%), Gaps = 33/408 (8%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
S P +SL + + Q CA+ + +++ ++ + +F+ N I+ Y KC +++
Sbjct: 727 SSVSPNEFSL-SSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDME 785
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ +F + + + SWN ++ Y+++GF L +F +M + V + Q+TY++VLR+ A
Sbjct: 786 SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+ Q+H LI K F + I+ +SL+D+Y KC + DAR +F+ ++ + VSWN
Sbjct: 846 STASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNA 905
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------H 267
I+ Y V G A +F M + I+ + TF L C +G+ + H
Sbjct: 906 IISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDH 965
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI 326
G+ ++ + + + GRL DA + D P + + W +++S + +
Sbjct: 966 GIEPSMEH------YTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNV 1019
Query: 327 REAR---ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
R E E+ ++ ++ + Y+ + +LD V RK+ ++I +
Sbjct: 1020 ELGRFSAEKVLEIEPQDETTYVLLSNMYSAA----GSLDQVAFFRKSMRNIG-------V 1068
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
GLS +++ EVH F ++ + V NA+L+ NL++ R
Sbjct: 1069 RKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWL----NLKAIR 1112
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 185/594 (31%), Positives = 307/594 (51%), Gaps = 73/594 (12%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A L C SK+ ++AR++ + ++ + +F+ NR ++ YGKCG +DAR +FD
Sbjct: 20 SPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDR 79
Query: 103 MPER-------------------------------DGGSWNAMLGAYTQNGFPGRTLELF 131
MP+R D SWNAM+ + Q+ L F
Sbjct: 80 MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+DM+ N+ ++ + L + A +L + Q+H LI K + +V + S+LVD Y KC
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
V+ A+R FD + +N VSWN ++ Y G +A+ +F M+ + P T A+ +
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVV 259
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNI 310
AC+ S+ EG+QIH ++K D +D+VLG +L +MY KC R+ +AR + D+ RN+
Sbjct: 260 SACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNV 319
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S TS+V GYA + ++ AR +F+ M E+NV+SWNA++AGYT++ +EA+ L+++
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEV------HGFIHRNDYSSNIFVSNALLDMYRKC 424
+ T G +LN CA L+++K+G++ HGF ++ S+IFV N+L+DMY KC
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKC 439
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
G + + F +M + RD VSWNA++ GYA+ G A+ F +M +P T +
Sbjct: 440 GMVEDGCLVFERMVE-RDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGV 498
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+AC++ +E+G++ Y E + K D
Sbjct: 499 LSACSHAGLVEEGRR-----------------------YFHSMRTELGLAPMK-----DH 530
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
C +LG R E L++ ++PD++ + +L AC GN++L
Sbjct: 531 FTCMVDLLG-----RAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELG 579
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 289/598 (48%), Gaps = 100/598 (16%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS---------- 211
++++H I+K F + +++ LVDAYGKC DAR++FD + +N S
Sbjct: 38 ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97
Query: 212 ---------------------WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
WN +V + +EA+ F M ED ++F +A
Sbjct: 98 FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSA 157
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC+ L+ G+QIH +I K + D + +L +MY KCG
Sbjct: 158 LSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV---------------- 201
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+ A+ F+ M RN++SWN+++ Y ++ +AL+ +M
Sbjct: 202 ---------------VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDN 246
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ D++TL +++ CA S I+ G ++H + R+ Y +++ + NAL+DMY KC +
Sbjct: 247 GVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNE 306
Query: 430 ARIWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQS 459
AR+ F +M R ++ VSWNA++ GY + G++
Sbjct: 307 ARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGEN 366
Query: 460 EEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY------EINV 512
EEA+ F ++ E+ P+ +TF LL ACAN++ L+ G+Q H ++++ + E ++
Sbjct: 367 EEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDI 426
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+L+++Y KC +E VF+ DV+ N+MI+G+ N G ALE+F M
Sbjct: 427 FVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVS 486
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G KPDH+T G+L AC H G V+ ++F SMR + G+ P +H+ CM+ L R G + E
Sbjct: 487 GQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDE 546
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
D + MP P + + C+ +G LG++ A +L E++P + + +N +
Sbjct: 547 ANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMY 604
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 37/330 (11%)
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D +L+ C + +H I + +SS IF+ N L+D Y KCG AR
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 434 FYQMSQRR------------------------------DKVSWNAVLTGYARRGQSEEAM 463
F +M QR D+ SWNA+++G+A+ + EEA+
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136
Query: 464 TSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +M E ++++F + L+ACA ++ L G QIH + ++ Y ++V ALV++Y
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC + A R F + +++ NS+I + N +ALEVF +M G++PD IT
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
++ AC ++ LQ + + L ++ +Y + + E +RMP
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
V + C GYA A RL
Sbjct: 317 RNVVSETSMV---C---GYARAASVKAARL 340
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 310/630 (49%), Gaps = 57/630 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y K ++ +F +PE++ SW+A++ QN L+ F +M +Q
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+VLRS A EL + QLH +K F + I+ ++ +D Y KC M DA+ +FD+
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+N N S+N ++ Y +G +A+++F +++ + + + AC+ + EG
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+QI+G+ IK D V + +MY KC L
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA--------------------------- 434
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F+EM R+ +SWNA++A + ++ E L M ++ + D+ T G IL
Sbjct: 435 ----EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C G S + G E+H I ++ +SN V +L+DMY KCG + A + QR +
Sbjct: 491 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 444 -------------------VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
VSWN++++GY + QSE+A F+ M + P KFT+ T+
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L CAN++S GKQIH VI+ + +V LV++Y+KC L + +F++S D
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ N+MI G+ H+ +G EA+++F M E IKP+H+TF IL AC H G + L++F
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC---RKNG 660
M+ YG+ PQL HY M+ + + G +K + + MPF + R + C R N
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNN- 788
Query: 661 YATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ E A L L+P + + +N +
Sbjct: 789 -VEVAEEATAALLRLDPQDSSAYTLLSNVY 817
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 251/463 (54%), Gaps = 14/463 (3%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K + VS S+YA + + CA+ + +L ++ + + ++ Y KC N+
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA+ LFD + S+NAM+ Y+Q + L LF + SG+ ++I+ + V R+ A
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L Q++GL +K +V + ++ +D YGKC + +A R+FD+++ ++AVSWN
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ + G G E + +F MLR I P FTF + L AC+ S Y GM+IH I+K
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKSG 512
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ V SL +MY KCG +E+A + + +R +SG + E ++ N
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA-----------NVSGTMEELEKMHN 561
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ + +SWN++++GY ++A M + D+ T +L+ CA L+ +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK++H + + + S++++ + L+DMY KCG+L +R+ F + S RRD V+WNA++ GYA
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF-EKSLRRDFVTWNAMICGYA 680
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
G+ EEA+ F M E +P+ TF ++L ACA++ +++G
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 166/585 (28%), Positives = 284/585 (48%), Gaps = 65/585 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ L L Q+ +S+ V A + + P V N+ I Y K ++ A
Sbjct: 81 PTTFVLNC-LLQVYTNSRDFVSASMVFDKM----PLRDVVSWNKMINGYSKSNDMFKANS 135
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEE 156
F+ MP RD SWN+ML Y QNG +++E+F+DM G+ + T+A +L+ S E+
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 195
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LG+ Q+HG++V+ G +V+ S+L+D Y K ++ R+F I KN+VSW+ I+
Sbjct: 196 TSLGM--QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 217 RRYLVAGNGKEAVVMFFK-MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V N + FFK M + + +A+ L +C+ LS G Q+H +K DF
Sbjct: 254 AG-CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D +V + +MY KC ++DA+ L D + N S+ ++++GY+ +A LF+
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
L L F D+++L + CA + + G
Sbjct: 373 --------------------LMSSGLGF-----------DEISLSGVFRACALVKGLSEG 401
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++G ++ S ++ V+NA +DMY KC L A F +M +RRD VSWNA++ + +
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQ 460
Query: 456 RGQSEEAMTSF-SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G+ E + F S ++ P +FTF ++L AC SL G +IH ++++ N
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV 519
Query: 515 RGALVEVYTKCCCLEYAIRVFKE-------SSSLDVI----------IC---NSMILGFC 554
+L+++Y+KC +E A ++ S +++ + +C NS+I G+
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
E+ +A +F M + GI PD T+ +L C + + L Q
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 252/565 (44%), Gaps = 70/565 (12%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
+ F D + S + ++ V + A++ L + KQ H ++ GF + + L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVR----------------------------- 217
Y A +FD + ++ VSWN ++
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 218 --RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
YL G +++ +F M RE I TFA L CSFL GMQIHG+++++
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ D V +L +MY K R ++ + E+N +SW++I++G
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV-------------- 257
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ N++S AL F M+K + Q +L CA LSE+++G
Sbjct: 258 --QNNLLSL---------------ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H ++D++++ V A LDMY KC N++ A+I F S+ ++ S+NA++TGY++
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF-DNSENLNRQSYNAMITGYSQ 359
Query: 456 RGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+A+ F M + + + ACA + L +G QI+ I++ ++V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
A +++Y KC L A RVF E D + N++I N +G E L +F M + I
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+PD TF IL AC G++ ++ S+ K G+ +I +Y + G ++E E
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 635 D----FVNRMPFNPTVPMLRKIFDK 655
F R + T+ L K+ +K
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNK 562
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 84 IECYGKCGNLDDAR-------------GLFDEMPERDGG-------SWNAMLGAYTQNGF 123
I+ Y KCG +++A G +E+ + SWN+++ Y
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
LF M G++ ++ TYA VL + A G+ KQ+H ++K+ +V + S+
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LVD Y KC + D+R MF+ ++ V+WN ++ Y G G+EA+ +F +M+ E+I+P
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGL 301
+ TF + L AC+ + +G++ + ++K D+ D + ++ ++ K G+++ A L
Sbjct: 704 HVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 762
Query: 302 L-DQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + P E + + W +++ I EA + ++ ++ + Y + +
Sbjct: 763 IREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGM 822
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W++ D MR G L G S +++ E+H F+
Sbjct: 823 WEKVSDLRRNMR-----------GFKLKKEPGCSWVELKDELHVFL 857
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 339 RNVISWNAMLA---GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
R+V+S+N L Y R + DF+ + + CA +++G
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFL----NQVNSVSTTNFSFVFKECAKQGALELG 67
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--------------- 440
K+ H + + + FV N LL +Y + SA + F +M R
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 441 ---------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
RD VSWN++L+GY + G+S +++ F +M E TF +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
C+ + G QIH V+R + +VV AL+++Y K ++RVF+ + +
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+++I G N AL+ F M+K + +L +C ++L Q
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 320/667 (47%), Gaps = 85/667 (12%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N I Y CG+L +R +F M ERD SW A++ AY + G +F M
Sbjct: 218 VFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQL 277
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV + I+++ +L A E+ ++ + + +RG V
Sbjct: 278 DGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTV------------------ 319
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
SWN I+ + G ++A+ MF +ML P T A+ L AC+
Sbjct: 320 -------------NSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTG 366
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG----------------------- 293
L + G IH + K G+ V GS+ +MY KCG
Sbjct: 367 LKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEM 426
Query: 294 --------RLEDARGLLD--QPD--ERNIISWTSIVSGYAISGRIREARELFNEMPER-- 339
++EDA GLL Q D + ++I++ +I+SG+A +G +A EL +EM +
Sbjct: 427 IAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGL 486
Query: 340 --NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ------------VTLGLILNV 385
NV+S+N +++G+ +S L EAL +M+ + + +T+ L
Sbjct: 487 KPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPA 546
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L+ GKE+HG+ RN + NIFVS+AL+DMY KC ++ SA F+++ R + VS
Sbjct: 547 CADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGR-NTVS 605
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WNA++ GY Q EEA+ F EM E +PS TF L AC +I+++ G+ +H +
Sbjct: 606 WNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAA 665
Query: 505 R-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+ E+ AL+++Y KC + A VF DV + N+MI F + R A
Sbjct: 666 KCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAF 725
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
VF M+ GI PDHITF +L AC +G V+ ++F+SM YG+ LEHY CM+ +
Sbjct: 726 AVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGI 785
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
G + E DF+ +MP+ P M + CR + +GE AA+ L EL P +
Sbjct: 786 LGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNY 845
Query: 684 KITTNRF 690
+ +N +
Sbjct: 846 MLLSNIY 852
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/569 (22%), Positives = 243/569 (42%), Gaps = 90/569 (15%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAI--VEARKLESNLVTFYPTPPVFLLN 81
+TL + L + P S L C++ + AR ++ N + + + + N
Sbjct: 65 QTLLPSFVDTLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSS----IGN 120
Query: 82 RAIECYGKCG-NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ + Y K +L+DAR L DE+P R ++ A++ +Y ++ F M + G+
Sbjct: 121 KLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGML 180
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ +L++ + L + K +HG ++++ +V + ++L+ Y C + +R +
Sbjct: 181 PDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSV 240
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +Q ++ VSW ++ Y+ G EA +F M + ++P +++ L
Sbjct: 241 FHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALL--------- 291
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +G I D+ L +L EM RGL QP + SW I+SG
Sbjct: 292 -SGFARNGEI--------DLALETLEEM--------PERGL--QP---TVNSWNGIISGC 329
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+G + +A ++F+ M LW +D + +T+
Sbjct: 330 VQNGYLEDALDMFSRM-------------------LW------------YPEDPNIITIA 358
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C GL +++GK +H ++ N++V +++DMY KCG+ A F + ++
Sbjct: 359 SILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXK-AEN 417
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
++ WN ++ Y G+ E+A+ MQ + +P T+ T+L+ A Q ++
Sbjct: 418 KNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXEL 477
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
+++ + NVV L+ + + A++VF+ S G
Sbjct: 478 LSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQS---------------PSDG 522
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLAC 588
EV L ++P+ IT G L AC
Sbjct: 523 CNPNEVLNL----SMRPNPITITGALPAC 547
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 15/283 (5%)
Query: 382 ILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGN---LRSARIWFYQM 437
+LN C+ LSE + ++H + N + N L+ +Y C N L AR ++
Sbjct: 89 LLNRCSTLSEFR---QIHARVVKLNALKWKSSIGNKLVVLY--CKNQWSLEDARKLLDEI 143
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQG 496
R ++ A++ Y R Q +E + F M +E P K+ T+L AC+ + G
Sbjct: 144 PNRTVP-AYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIG 202
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K +H FVIR E +V AL+ Y+ C L + VF DV+ ++I +
Sbjct: 203 KMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEE 262
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EA +F LM+ +G+KPD I++ +L G + LAL+ + M + G+ P +
Sbjct: 263 GLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMP-ERGLQPTVNS 321
Query: 617 YECMIKLYCRYGYMKELEDFVNRM---PFNPTVPMLRKIFDKC 656
+ +I + GY+++ D +RM P +P + + I C
Sbjct: 322 WNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPAC 364
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 141/324 (43%), Gaps = 26/324 (8%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P +F+ + ++ Y KC ++D A +F + R+ SWNA++ Y N P L+LFL+M
Sbjct: 570 PNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEM 629
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF--CGNVILESSLVDAYGKCM 192
G+ + IT+ + + + + + LHG K N I S+L+D Y KC
Sbjct: 630 LGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAI-XSALIDMYAKCG 688
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA+ +FD K+ WN ++ + V G + A +F +M I P + TF + L
Sbjct: 689 SILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLS 748
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-------- 304
AC+ +G+ G E V +L G L A GLLD+
Sbjct: 749 ACA-----RDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGA-GLLDEALDFIRQM 802
Query: 305 PDERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
P + W +++ + R A+ LF P+ N ++ + Y S +W A
Sbjct: 803 PYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPD-NATNYMLLSNIYVSSGMWDFA 861
Query: 361 LDFVFLMRK----TTKDIDQVTLG 380
+ MR T K+ +T+G
Sbjct: 862 KNLRSFMRGRKLLTIKECSYLTVG 885
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/588 (29%), Positives = 310/588 (52%), Gaps = 33/588 (5%)
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD SW+A++ Y N + F DM G N+ + V R+ + + + + K
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 165 LHGLIVKRG-FCGNVILESSLVDAYGKCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ G ++K G F +V + +L+D + K + A ++FD + ++N V+W +++ R+
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G ++AV +F M+ P FT + + AC+ + G Q H +++K + D V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL +MY KC G + +AR++F+ MP NV+
Sbjct: 184 CSLVDMYAKC----------------------------VADGSVDDARKVFDRMPVHNVM 215
Query: 343 SWNAMLAGYTRSL-LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
SW A++ GY +S +EA++ M + + T +L CA LS+I +G++V+
Sbjct: 216 SWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYAL 275
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + +S V N+L+ MY +CGN+ +AR F + ++ + VS+N ++ YA+ SEE
Sbjct: 276 VVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEK-NLVSYNTIVNAYAKSLNSEE 334
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A F+E++ T + FTF +LL+ ++I ++ +G+QIH ++++ ++ N+ AL+
Sbjct: 335 AFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALIS 394
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y++C +E A +VF E +VI SMI GF + ALE F M + G+ P+ +T
Sbjct: 395 MYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVT 454
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ +L AC H G + L+ F SM+ ++GI+P++EHY C++ L R G+++E + VN M
Sbjct: 455 YIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM 514
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
PF +LR CR +G LG+ AA + E +P P + + +N
Sbjct: 515 PFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSN 562
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 226/411 (54%), Gaps = 37/411 (9%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G+L+ A +FD MP+R+ +W M+ + Q GF ++LFLDM SG ++ T + V+
Sbjct: 93 GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVV 152
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV---MTDARRMFDDIQNK 207
+ AE L + +Q H L++K G +V + SLVD Y KC+ + DAR++FD +
Sbjct: 153 SACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH 212
Query: 208 NAVSWNVIVRRYLVAGN-GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
N +SW I+ Y+ +G +EA+ +F +M++ ++P +FTF++ L AC+ LS + G Q+
Sbjct: 213 NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
+ +++K+ + V SL MY +CG +E+AR D E+N++S+ +IV+ YA S
Sbjct: 273 YALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNS 332
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA ELFNE + ++ T +L+
Sbjct: 333 EEAFELFNE-------------------------------IEGAGTGVNAFTFASLLSGA 361
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ + I G+++H I ++ + SN+ + NAL+ MY +CGN+ +A F +M + +SW
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGD-GNVISW 420
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+++TG+A+ G + A+ +F +M + P++ T+ +L+AC+++ + +G
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEG 471
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 160/332 (48%), Gaps = 28/332 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y +CGN+++AR FD + E++ S+N ++ AY ++ ELF ++ +G
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTG 348
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T+A++L ++ +G +Q+H I+K GF N+ + ++L+ Y +C + A ++
Sbjct: 349 VNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQV 408
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+++ + N +SW ++ + G A+ F KML + P T+ L ACS +
Sbjct: 409 FNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLI 468
Query: 261 YEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS 312
EG++ HG++ +++ + ++ + G LE+A L++ P + + +
Sbjct: 469 SEGLKHFKSMKVEHGIVPRMEH------YACVVDLLGRSGHLEEAMELVNSMPFKADALV 522
Query: 313 WTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ + + G + + A E+ E + ++ + + + W+E + +RK
Sbjct: 523 LRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAE----IRK 578
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
K+ + L AG S I++ +VH F
Sbjct: 579 KMKERN-------LTKEAGCSWIEVENKVHKF 603
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 90/167 (53%), Gaps = 3/167 (1%)
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
M +RD VSW+A+++ YA ++ EA+++F +M + P+++ F + AC+N ++
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 496 GKQIHCFVIRNCYEINVVCRG-ALVEVYTKCCC-LEYAIRVFKESSSLDVIICNSMILGF 553
GK I F+++ Y + VC G AL++++ K LE A +VF +V+ MI F
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
R+A+++F M G PD T G++ AC G + L QF
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L +S AI + ++ S ++ + + N I Y +CGN++ A +F+EM
Sbjct: 354 FASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG 413
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELGVS 162
+ + SW +M+ + ++GF R LE F M +GVS N++TY VL + + + G+
Sbjct: 414 DGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGL- 472
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL-- 220
K + V+ G + + +VD G+ + +A + + + K +++R +L
Sbjct: 473 KHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADA---LVLRTFLGA 529
Query: 221 --VAGN---GKEAVVMFFKMLRED 239
V GN GK A M + D
Sbjct: 530 CRVHGNMDLGKHAAEMILEQDPHD 553
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 310/630 (49%), Gaps = 57/630 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y K ++ +F +PE++ SW+A++ QN L+ F +M +Q
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 239
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+VLRS A EL + QLH +K F + I+ ++ +D Y KC M DA+ +FD+
Sbjct: 240 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 299
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+N N S+N ++ Y +G +A+++F +++ + + + AC+ + EG
Sbjct: 300 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 359
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+QI+G+ IK D V + +MY KC L
Sbjct: 360 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA--------------------------- 392
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F+EM R+ +SWNA++A + ++ E L M ++ + D+ T G IL
Sbjct: 393 ----EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 448
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C G S + G E+H I ++ +SN V +L+DMY KCG + A + QR +
Sbjct: 449 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 507
Query: 444 -------------------VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
VSWN++++GY + QSE+A F+ M + P KFT+ T+
Sbjct: 508 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 567
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L CAN++S GKQIH VI+ + +V LV++Y+KC L + +F++S D
Sbjct: 568 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 627
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ N+MI G+ H+ +G EA+++F M E IKP+H+TF IL AC H G + L++F
Sbjct: 628 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 687
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC---RKNG 660
M+ YG+ PQL HY M+ + + G +K + + MPF + R + C R N
Sbjct: 688 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNN- 746
Query: 661 YATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ E A L L+P + + +N +
Sbjct: 747 -VEVAEEATAALLRLDPQDSSAYTLLSNVY 775
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 251/463 (54%), Gaps = 14/463 (3%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K + VS S+YA + + CA+ + +L ++ + + ++ Y KC N+
Sbjct: 232 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 291
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA+ LFD + S+NAM+ Y+Q + L LF + SG+ ++I+ + V R+ A
Sbjct: 292 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 351
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L Q++GL +K +V + ++ +D YGKC + +A R+FD+++ ++AVSWN
Sbjct: 352 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 411
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ + G G E + +F MLR I P FTF + L AC+ S Y GM+IH I+K
Sbjct: 412 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKSG 470
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ V SL +MY KCG +E+A + + +R +SG + E ++ N
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA-----------NVSGTMEELEKMHN 519
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ + +SWN++++GY ++A M + D+ T +L+ CA L+ +
Sbjct: 520 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 579
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK++H + + + S++++ + L+DMY KCG+L +R+ F + S RRD V+WNA++ GYA
Sbjct: 580 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF-EKSLRRDFVTWNAMICGYA 638
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
G+ EEA+ F M E +P+ TF ++L ACA++ +++G
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 681
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 284/585 (48%), Gaps = 65/585 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ L L Q+ +S+ V A S + P V N+ I Y K ++ A
Sbjct: 39 PTTFVLNC-LLQVYTNSRDFVSA----SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANS 93
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEE 156
F+ MP RD SWN+ML Y QNG +++E+F+DM G+ + T+A +L+ S E+
Sbjct: 94 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 153
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LG+ Q+HG++V+ G +V+ S+L+D Y K ++ R+F I KN+VSW+ I+
Sbjct: 154 TSLGM--QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 211
Query: 217 RRYLVAGNGKEAVVMFFK-MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V N + FFK M + + +A+ L +C+ LS G Q+H +K DF
Sbjct: 212 AG-CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 270
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D +V + +MY KC ++DA+ L D + N S+ ++++GY+ +A LF+
Sbjct: 271 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 330
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
L L F D+++L + CA + + G
Sbjct: 331 --------------------LMSSGLGF-----------DEISLSGVFRACALVKGLSEG 359
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++G ++ S ++ V+NA +DMY KC L A F +M +RRD VSWNA++ + +
Sbjct: 360 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQ 418
Query: 456 RGQSEEAMTSF-SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G+ E + F S ++ P +FTF ++L AC SL G +IH ++++ N
Sbjct: 419 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV 477
Query: 515 RGALVEVYTKCCCLEYAIRVFKE-------SSSLDVI----------IC---NSMILGFC 554
+L+++Y+KC +E A ++ S +++ + +C NS+I G+
Sbjct: 478 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 537
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
E+ +A +F M + GI PD T+ +L C + + L Q
Sbjct: 538 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 582
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 241/535 (45%), Gaps = 72/535 (13%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LELG KQ H ++ GF + + L+ Y A +FD + ++ VSWN ++
Sbjct: 22 LELG--KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 79
Query: 217 R-------------------------------RYLVAGNGKEAVVMFFKMLREDIRPLNF 245
YL G +++ +F M RE I
Sbjct: 80 NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR 139
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
TFA L CSFL GMQIHG+++++ + D V +L +MY K R ++ +
Sbjct: 140 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
E+N +SW++I++G + N++S AL F
Sbjct: 200 PEKNSVSWSAIIAGCV----------------QNNLLSL---------------ALKFFK 228
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M+K + Q +L CA LSE+++G ++H ++D++++ V A LDMY KC
Sbjct: 229 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 288
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLL 484
N++ A+I F S+ ++ S+NA++TGY++ +A+ F M + + +
Sbjct: 289 NMQDAQILF-DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 347
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
ACA + L +G QI+ I++ ++V A +++Y KC L A RVF E D +
Sbjct: 348 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 407
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N++I N +G E L +F M + I+PD TF IL AC G++ ++ S+
Sbjct: 408 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 466
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELED----FVNRMPFNPTVPMLRKIFDK 655
K G+ +I +Y + G ++E E F R + T+ L K+ +K
Sbjct: 467 -VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 520
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 186/367 (50%), Gaps = 5/367 (1%)
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ E +R L+ T + C+ + G Q H +I F VL L ++Y
Sbjct: 1 MAESLRLLHMTRS---VECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 57
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
A + D+ R+++SW +++GY+ S + +A FN MP R+V+SWN+ML+GY ++
Sbjct: 58 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 117
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
++++ M + + D T +IL VC+ L + +G ++HG + R +++ ++
Sbjct: 118 ESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS 177
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETR 474
ALLDMY K G + +Q ++ VSW+A++ G + A+ F EMQ
Sbjct: 178 ALLDMYAK-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 236
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
S+ + ++L +CA +S L G Q+H +++ + + + R A +++Y KC ++ A +
Sbjct: 237 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 296
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F S +L+ N+MI G+ E G +AL +F + G+ D I+ G+ AC +
Sbjct: 297 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 356
Query: 595 KLALQFF 601
LQ +
Sbjct: 357 SEGLQIY 363
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 84 IECYGKCGNLDDAR-------------GLFDEMPERDGG-------SWNAMLGAYTQNGF 123
I+ Y KCG +++A G +E+ + SWN+++ Y
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 541
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
LF M G++ ++ TYA VL + A G+ KQ+H ++K+ +V + S+
Sbjct: 542 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 601
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LVD Y KC + D+R MF+ ++ V+WN ++ Y G G+EA+ +F +M+ E+I+P
Sbjct: 602 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 661
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGL 301
+ TF + L AC+ + +G++ + ++K D+ D + ++ ++ K G+++ A L
Sbjct: 662 HVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 720
Query: 302 L-DQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + P E + + W +++ I EA + ++ ++ + Y + +
Sbjct: 721 IREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGM 780
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W++ D MR G L G S +++ E+H F+
Sbjct: 781 WEKVSDLRRNMR-----------GFKLKKEPGCSWVELKDELHVFL 815
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/627 (29%), Positives = 318/627 (50%), Gaps = 39/627 (6%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ + R++ +++ V ++N + Y KCG ++DA +F++MPE D SWN M+
Sbjct: 125 VYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISG 184
Query: 118 YTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
+ ++ R+L F M G+ N++ + + S + L +++HG++VK G
Sbjct: 185 FQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDV 244
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNK-----NAVSWNVIVRRYLVAGNGKEAVVM 231
L SSL++ Y KC + +A +F+ I +K NAV WNV++ Y+ G +A+++
Sbjct: 245 EEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLL 304
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F KM+ I+P T + CS G QIHG+I K + + V +L +MY+K
Sbjct: 305 FIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLK 364
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG + GL ++F N+I W+A+++
Sbjct: 365 CGDM--GTGL-----------------------------KIFRRSQNHNLIMWSAVISNC 393
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+S +AL+ + + D L +L C+ L+ G ++HG + + S++
Sbjct: 394 AQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDV 453
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
FV +AL+D+Y KC ++ ++ F ++SQ+ D VSWNA+++GYA+ ++EA+ +F +MQ
Sbjct: 454 FVGSALVDLYAKCRDMGYSKKVFLRLSQK-DLVSWNALISGYAQDECADEALKAFRDMQL 512
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E RP+ T +L+ CA++S + K++H ++IR V+ +L+ Y KC +
Sbjct: 513 EEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINS 572
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
++ F++ + + NS+ILG + R E + +F M GIKPDH+TF IL AC H
Sbjct: 573 SLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSH 632
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G V ++F SM + + PQLE Y CM+ L R G++ + D + MP P +
Sbjct: 633 AGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWG 692
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNP 677
+ C+ +G L E A + +L P
Sbjct: 693 SLLGSCKNHGDEILAEIVANHIFKLVP 719
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 229/451 (50%), Gaps = 38/451 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS- 110
C+S +++ R++ +V +L++ IE Y KCG++ +A +F+ + ++D
Sbjct: 221 CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRR 280
Query: 111 ----WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
WN M+ Y NG + L LF+ M G+ + T ++ +E L++ KQ+H
Sbjct: 281 NAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIH 340
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
GLI K G N+ +E++L+D Y KC M ++F QN N + W+ ++ +G
Sbjct: 341 GLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPT 400
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+A+ +F++ ED + L ACS L+ EGMQIHG+ K+ F D V +L
Sbjct: 401 KALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALV 460
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
++Y KC + ++ + + +++++SW +++SGYA EA + F +M +
Sbjct: 461 DLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEI----- 515
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
R T VT+ IL+VCA LS + + KEVHG++ R
Sbjct: 516 ---------------------RPNT-----VTIACILSVCAHLSVMTLCKEVHGYLIRQG 549
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
S + VSN+L+ Y KCG++ S+ F +M +R D VSWN+++ G +++E + F
Sbjct: 550 LGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERND-VSWNSIILGMGMHSRTDEMIVLF 608
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+M +P TF +L+AC++ +++G
Sbjct: 609 DKMVASGIKPDHVTFTAILSACSHAGRVDEG 639
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 248/487 (50%), Gaps = 40/487 (8%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL-ELGVSKQLHGLIV 170
N ++ YT++GF + ++L M GV + Y L + L ++ +Q+HG ++
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
K G +V + +SL+ Y KC V+ DA +MF+ + + VSWN ++ + + + +++
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196
Query: 231 MFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F M+ E I P +++ +CS L S G +IHGV++K + ++ ++ SL EMY
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMY 256
Query: 290 VKCGRLEDAR----GLLDQPD-ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+KCG +++A +LD+ RN + W ++SGY +G +A LF +M
Sbjct: 257 MKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKM-------- 308
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
++W D+ T+ + ++C+ +I GK++HG I +
Sbjct: 309 ----------MVWGIKPDY-------------STMVSLFSLCSESLDIAFGKQIHGLIFK 345
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+NI V ALLDMY KCG++ + + ++ SQ + + W+AV++ A+ G +A+
Sbjct: 346 FGLKNNIRVETALLDMYLKCGDMGTG-LKIFRRSQNHNLIMWSAVISNCAQSGCPTKALE 404
Query: 465 SFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F E + E +L AC++++ +G QIH + + +V ALV++Y
Sbjct: 405 LFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYA 464
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + Y+ +VF S D++ N++I G+ +E EAL+ F M+ E I+P+ +T
Sbjct: 465 KCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIAC 524
Query: 584 ILLACIH 590
IL C H
Sbjct: 525 ILSVCAH 531
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 213/446 (47%), Gaps = 53/446 (11%)
Query: 204 IQNKNAVSW-NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF-ACSFLSSPY 261
IQ +VS+ N ++R Y G +A+ ++ KML + ++ F + L A L Y
Sbjct: 67 IQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVY 126
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+G QIHG ++K+ D V+ SL MY KCG +EDA
Sbjct: 127 KGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAV---------------------- 164
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAG------YTRSLLWKEALDFVFLMRKTTKDID 375
++F +MPE +++SWN M++G YTRSL++ ++ + F + +
Sbjct: 165 ---------QMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYP-----N 210
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+V + C+ L + G+E+HG + ++ ++ ++L++MY KCG++++A F
Sbjct: 211 RVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFN 270
Query: 436 QM----SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANI 490
+ S RR+ V WN +++GY G +A+ F +M W +P T +L + C+
Sbjct: 271 SILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSES 330
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+ GKQIH + + + N+ AL+++Y KC + +++F+ S + ++I+ +++I
Sbjct: 331 LDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVI 390
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
+ +ALE+F K E D +L AC +Q + K G
Sbjct: 391 SNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQ-IHGLATKMGF 449
Query: 611 IPQLEHYECMIKLY--CR-YGYMKEL 633
+ + ++ LY CR GY K++
Sbjct: 450 VSDVFVGSALVDLYAKCRDMGYSKKV 475
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 180/445 (40%), Gaps = 33/445 (7%)
Query: 42 YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
YS LF LC+ S I +++ + F + + ++ Y KCG++ +F
Sbjct: 317 YSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFR 376
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
+ W+A++ Q+G P + LELF + A+ VLR+ +
Sbjct: 377 RSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPE 436
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
Q+HGL K GF +V + S+LVD Y KC M ++++F + K+ VSWN ++ Y
Sbjct: 437 GMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQ 496
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
EA+ F M E+IRP T A L C+ LS ++HG +I+ +V
Sbjct: 497 DECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLV 556
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL Y KCG + + ++ ERN +SW SI+ G + R E LF++M +
Sbjct: 557 SNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGI 616
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG-KEVHG 400
D VT IL+ C+ + G K
Sbjct: 617 -------------------------------KPDHVTFTAILSACSHAGRVDEGCKYFKS 645
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + + ++D+ + G+L A M D W ++L G + E
Sbjct: 646 MVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLL-GSCKNHGDE 704
Query: 461 EAMTSFSEMQWETRPSKFTFETLLA 485
+ ++ PS + LLA
Sbjct: 705 ILAEIVANHIFKLVPSSVGYRVLLA 729
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/634 (28%), Positives = 312/634 (49%), Gaps = 33/634 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
PV Y L +LC +A E ++ S + + L N + + + GNL DA
Sbjct: 103 PVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWY 162
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M +R+ SWN ++G Y + G L+L+ M GV + T+ VLR+
Sbjct: 163 VFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPN 222
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +++H +++ GF +V + ++L+ Y KC + AR +FD + N++ +SWN ++
Sbjct: 223 LVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISG 282
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G E + +F M++ + P T + + AC L G QIHG +++ +F D
Sbjct: 283 YFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRD 342
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ SL MY G +E EA +F+
Sbjct: 343 PSIHNSLIPMYSSVGLIE-------------------------------EAETVFSRTEC 371
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+++SW AM++GY L+ ++AL+ +M D++T+ ++L+ C+ L + MG +
Sbjct: 372 RDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNL 431
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + S V+N+L+DMY KC + A + + + ++ VSW +++ G +
Sbjct: 432 HEVAKQKGLVSYSIVANSLIDMYAKCKCIDKA-LEIFHSTLEKNIVSWTSIILGLRINNR 490
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EA+ F EM +P+ T +L+ACA I +L GK+IH +R + A+
Sbjct: 491 CFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAI 550
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y +C +EYA + F S +V N ++ G+ +G A E+F M + + P+
Sbjct: 551 LDMYVRCGRMEYAWKQFF-SVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNE 609
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
+TF IL AC G V L++F+SM+ KY I+P L+HY C++ L R G ++E +F+
Sbjct: 610 VTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQ 669
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+MP P + + + CR + + LGE AA +
Sbjct: 670 KMPMKPDPAVWGALLNSCRIHHHVELGELAAENI 703
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 144/281 (51%), Gaps = 8/281 (2%)
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
LD + +R +D V L + +C K G V+ ++ + ++ + NALL M
Sbjct: 94 LDSMHELRIPVEDDAYVAL---IRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSM 150
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFT 479
+ + GNL A F +M ++R+ SWN ++ GYA+ G +EA+ + M W +P +T
Sbjct: 151 FVRFGNLVDAWYVFGRM-EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYT 209
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
F +L C + +L +G++IH VIR +E +V AL+ +Y KC + A VF +
Sbjct: 210 FPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP 269
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
+ D I N+MI G+ N E L +FG+M K + PD +T ++ AC G+ +L Q
Sbjct: 270 NRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQ 329
Query: 600 FFD-SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
+R ++G P + + +I +Y G ++E E +R
Sbjct: 330 IHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEAETVFSR 368
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 28/353 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KC +D A +F E++ SW +++ N L F +M +
Sbjct: 448 NSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LK 506
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N +T VL + A L K++H ++ G + + ++++D Y +C M A +
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQ 566
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + ++ SWN+++ Y G G A +F +M+ ++ P TF + L ACS
Sbjct: 567 FFSVDHE-VTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625
Query: 261 YEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
EG++ + + K + + ++ + G+LE+A + + P + + W ++++
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL--------LWKEALDFVFLMRKT 370
S RI EL E+ N+ + GY L W + + +MR+
Sbjct: 686 ----SCRIHHHVEL-GELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQN 740
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
GLI++ G S +++ VH F+ +++ I NALL+ + K
Sbjct: 741 ---------GLIVD--PGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYK 782
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 298/606 (49%), Gaps = 35/606 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEM----PERDGGSWNAMLGAYTQNGFPGRTLELFL 132
VF+ N + YG G +D+AR +FDE ER+ SWN M+ AY +N G + +F
Sbjct: 135 VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFR 194
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M SG N+ ++ V+ + +L +Q+HG +V+ G+ +V ++LVD Y K
Sbjct: 195 EMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLG 254
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ A +F+ + + VSWN + + G+ A+ + +M + P FT ++ L
Sbjct: 255 DIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLK 314
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
AC+ + G QIHG ++K + D+ V L +MY K G L+DAR + D R++I
Sbjct: 315 ACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLIL 374
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W +++SG + GR E LF+ M KE LD
Sbjct: 375 WNALISGCSHDGRHGEVLSLFHRMR--------------------KEGLDL--------- 405
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D+++ TL +L A I ++VH + S+ V N L+D Y KCG L A I
Sbjct: 406 DVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYA-I 464
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
++ S+ D +S ++T ++ E+A+ F +M + P F +LL AC ++S
Sbjct: 465 KVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLS 524
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ EQGKQ+H +I+ + +V ALV Y KC +E A F ++ ++MI
Sbjct: 525 AYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIG 584
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G + G+ AL++F M EG+ P+HIT +L AC H G V A ++F+SM+ +GI
Sbjct: 585 GLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGID 644
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
EHY CMI + R G +++ + VN MPF + + R + LG AA +
Sbjct: 645 RTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEK 704
Query: 672 LNELNP 677
L L P
Sbjct: 705 LFTLEP 710
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 253/520 (48%), Gaps = 52/520 (10%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y +C AR +FDE+P+ SW++++ AY+ NG P L F M GV
Sbjct: 41 NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVP 100
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+ VL+ A ++ G Q+H L V +V + ++LV YG ++ +ARRM
Sbjct: 101 CNEFALPVVLK-CAPDVRFGA--QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRM 157
Query: 201 FDDI----QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
FD+ +NAVSWN ++ Y+ +A+ +F +M+ RP F F+ + AC+
Sbjct: 158 FDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTG 217
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G Q+HG +++ +E D +L +MY K G +E A + ++ +++SW +
Sbjct: 218 SRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAF 277
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG G A EL +M ++ +
Sbjct: 278 ISGCVTHGHDHRALELLLQMKSSGLVP-------------------------------NV 306
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
TL +L CAG +G+++HGF+ + + FV+ L+DMY K G L AR F
Sbjct: 307 FTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDF 366
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP---SKFTFETLLAACANISSL 493
M RRD + WNA+++G + G+ E ++ F M+ E ++ T ++L + A+ ++
Sbjct: 367 MP-RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAI 425
Query: 494 EQGKQIHCF-----VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+Q+H ++ + + IN L++ Y KC L+YAI+VFKES S D+I +
Sbjct: 426 CHTRQVHALAEKIGLLSDSHVIN-----GLIDSYWKCGQLDYAIKVFKESRSDDIISSTT 480
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
M+ + G +A+++F M ++G++PD +L AC
Sbjct: 481 MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 520
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 212/450 (47%), Gaps = 35/450 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S+ + R++ +V VF N ++ Y K G+++ A +F++MP D SW
Sbjct: 215 CTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSW 274
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA + +G R LEL L M SG+ N T ++VL++ A + +Q+HG +VK
Sbjct: 275 NAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVK 334
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+ + LVD Y K + DAR++FD + ++ + WN ++ G E + +
Sbjct: 335 AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSL 394
Query: 232 FFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F +M +E D+ T A+ L + + + Q+H + KI D V+ L + Y
Sbjct: 395 FHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSY 454
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG+L+ YAI ++F E ++IS M+
Sbjct: 455 WKCGQLD-----------------------YAI--------KVFKESRSDDIISSTTMMT 483
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
++ ++A+ M + + D L +LN C LS + GK+VH + + ++S
Sbjct: 484 ALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTS 543
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++F NAL+ Y KCG++ A + F + + R VSW+A++ G A+ G + A+ F M
Sbjct: 544 DVFAGNALVYAYAKCGSIEDADMAFSGLPE-RGIVSWSAMIGGLAQHGHGKRALDLFHRM 602
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQ 498
E P+ T ++L+AC + ++ K+
Sbjct: 603 LDEGVAPNHITLTSVLSACNHAGLVDDAKK 632
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 6/329 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + A R++ +V F+ ++ Y K G LDDAR +FD MP RD
Sbjct: 312 VLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRD 371
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQL 165
WNA++ + +G G L LF M G + N+ T A+VL+S+A + ++Q+
Sbjct: 372 LILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV 431
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L K G + + + L+D+Y KC + A ++F + ++ + +S ++ +G
Sbjct: 432 HALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHG 491
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A+ +F +MLR+ + P +F ++ L AC+ LS+ +G Q+H +IK F D +L
Sbjct: 492 EDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNAL 551
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV---- 341
Y KCG +EDA ER I+SW++++ G A G + A +LF+ M + V
Sbjct: 552 VYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNH 611
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
I+ ++L+ + L +A + M++T
Sbjct: 612 ITLTSVLSACNHAGLVDDAKKYFESMKET 640
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%), Gaps = 12/319 (3%)
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR +F+E+P+ +SW++++ Y+ + + ++AL MR ++ L ++L CA
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA- 113
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ---MSQRRDKVS 445
+++ G +VH ++FV+NAL+ +Y G + AR F + + R+ VS
Sbjct: 114 -PDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVS 172
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN +++ Y + QS +A+ F EM W RP++F F ++ AC LE G+Q+H V+
Sbjct: 173 WNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVV 232
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R YE +V ALV++Y+K +E A VF++ + DV+ N+ I G + ALE
Sbjct: 233 RTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALE 292
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC--MIK 622
+ MK G+ P+ T +L AC G L Q M + + + ++
Sbjct: 293 LLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFM---VKAVADFDEFVAVGLVD 349
Query: 623 LYCRYGYMKELEDFVNRMP 641
+Y ++G++ + + MP
Sbjct: 350 MYAKHGFLDDARKVFDFMP 368
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP S+ L + L C S A + +++ ++L+ T VF N + Y KCG+++
Sbjct: 504 KGLEPDSFVLSS-LLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIE 562
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA F +PER SW+AM+G Q+G R L+LF M GV+ N IT +VL S+
Sbjct: 563 DADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVL-SAC 621
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILE--SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVS 211
L + + +K F + E + ++D G+ + DA + +++ NA
Sbjct: 622 NHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAV 681
Query: 212 WNVIV 216
W ++
Sbjct: 682 WGALL 686
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 10/238 (4%)
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
SN LL +Y +C +AR F ++ VSW++++T Y+ G +A+ +F M+
Sbjct: 40 SNHLLTLYSRCRLPSAARAVFDEIPDPC-HVSWSSLVTAYSNNGMPRDALLAFRAMRGRG 98
Query: 474 RP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P ++F +L ++ G Q+H + +V ALV VY ++ A
Sbjct: 99 VPCNEFALPVVLKCAPDV---RFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEAR 155
Query: 533 RVFKE----SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
R+F E + + N+MI + N++ +A+ VF M G +P+ F ++ AC
Sbjct: 156 RMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNAC 215
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+++ Q ++ + G + ++ +Y + G ++ +MP V
Sbjct: 216 TGSRDLEAGRQVHGAV-VRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVV 272
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 200/678 (29%), Positives = 316/678 (46%), Gaps = 82/678 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y +CG ++DA +FD M RD SWN+M+G NG+ G ++LF M G
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGF----------CGNVILESSLVDAYGK 190
+ +T +VL + A + K +HG VK G + L S LV Y K
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362
Query: 191 CMVMTDARRMFDDIQNKNAVS-WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
C M ARR+FD + +K V WN+I+ Y G +E++ +F +M I P +
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L + LS +G+ HG I+K+ F V +L Y K + DA + ++ ++
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQD 482
Query: 310 IIS------------------------WTS--------------------------IVSG 319
IS WT +V G
Sbjct: 483 TISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG 542
Query: 320 YAI-SGRIREA-------------------RELFNEMPERNVISWNAMLAGYTRSLLWKE 359
Y++ +G I E ++F M ++NV+SW AM+ Y R+ L+ +
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
+ M D + L+ AG +K GK VHG+ RN + V+NAL++
Sbjct: 603 VAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFT 479
MY KC N+ AR+ F +++ + D +SWN ++ GY+R E+ + FS+M + RP+ T
Sbjct: 663 MYVKCRNVEEARLIFDRVTNK-DVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVT 721
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+L A A+ISSLE+G++IH + +R + + ALV++Y KC L A +F +
Sbjct: 722 MTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLT 781
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
++I MI G+ + G+ A+ +F M+ GI+PD +F IL AC H G +
Sbjct: 782 KKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRR 841
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
FF +M+ +Y I P+L+HY C++ L R G +KE +F+ MP P + + CR +
Sbjct: 842 FFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIH 901
Query: 660 GYATLGEWAARRLNELNP 677
L E A ++ +L P
Sbjct: 902 KNVKLAEKVADKVFKLEP 919
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 179/642 (27%), Positives = 278/642 (43%), Gaps = 90/642 (14%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARK----LESNLVTFYPTPPVFLLNRAIECYGK 89
L SD V Y + QLC +++ A++ + ++ L R + Y K
Sbjct: 89 LGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLK 148
Query: 90 CGNLDDARGLFDEMPER--DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
CG+L +AR +FD MP + D W +++ AY + G + LF M GVS + +
Sbjct: 149 CGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVS 208
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
VL+ + L + +HGL+ K G + ++L+ Y +C M DA R+FD + +
Sbjct: 209 CVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPR 268
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+A+SWN ++ G AV +F KM + + T + L AC+ L G +H
Sbjct: 269 DAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVH 328
Query: 268 GVIIK---------IDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDER-NIISWTSI 316
G +K + DD LGS L MYVKCG + AR + D + N+ W I
Sbjct: 329 GYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLI 388
Query: 317 VSGYAISGRIREARELFNEM------PERNVIS--------------------------- 343
+ GYA G E+ LF +M P+ + IS
Sbjct: 389 MGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGF 448
Query: 344 ------WNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQV------------------- 377
NA+++ Y +S + +A L F + R+ T + V
Sbjct: 449 GAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIR 508
Query: 378 -----------TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
TL +L CA G+ VHG+ + ++NALLDMY C +
Sbjct: 509 MWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 568
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLA 485
+S F M Q ++ VSW A++T Y R G ++ EM + RP F + L
Sbjct: 569 WQSTNQIFRSMGQ-KNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALH 627
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
A A SL+QGK +H + IRN E + AL+E+Y KC +E A +F ++ DVI
Sbjct: 628 AFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVIS 687
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
N++I G+ N E+ +F M + +P+ +T IL A
Sbjct: 688 WNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPA 728
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 218/498 (43%), Gaps = 51/498 (10%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLI-----VKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+Y V++ EE L +K+ H LI G G+V L LV AY KC + +AR
Sbjct: 99 SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSV-LGKRLVLAYLKCGDLGEART 157
Query: 200 MFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+FD + Q + W ++ Y AG+ +EAV +F +M + P + L S L
Sbjct: 158 VFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSL 217
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S EG IHG++ K+ V +L +Y +CGR+ED
Sbjct: 218 GSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMED-------------------- 257
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
A +F+ M R+ ISWN+M+ G + A+D M +I V
Sbjct: 258 -----------AARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSV 306
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHR-------NDYSSNI---FVSNALLDMYRKCGNL 427
T+ +L CAGL +GK VHG+ + + S I + + L+ MY KCG++
Sbjct: 307 TVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDM 366
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAA 486
SAR F MS + + WN ++ GYA+ G+ EE+++ F +M + P + LL
Sbjct: 367 ASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKC 426
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
+S G H ++++ + AL+ Y K + A+ VF D I
Sbjct: 427 ITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISW 486
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NS+I G N EA+E+F M +G + D +T +L AC + A +
Sbjct: 487 NSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACA-QSRYWFAGRVVHGYSV 545
Query: 607 KYGIIPQLEHYECMIKLY 624
K G+I + ++ +Y
Sbjct: 546 KTGLIGETSLANALLDMY 563
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 5/325 (1%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA S+ R + V L N ++ Y C + +F M +++ SW
Sbjct: 528 CAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSW 587
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
AM+ +Y + G + L +M G+ + + L + A + L K +HG ++
Sbjct: 588 TAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIR 647
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + ++L++ Y KC + +AR +FD + NK+ +SWN ++ Y E+ +
Sbjct: 648 NGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSL 707
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F ML + RP T L A + +SS G +IH ++ F D +L +MYVK
Sbjct: 708 FSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVK 766
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVISWNAM 347
CG L AR L D+ ++N+ISWT +++GY + G + A LF +M E + S++A+
Sbjct: 767 CGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAI 826
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTK 372
L S L E F M+K K
Sbjct: 827 LYACCHSGLAAEGRRFFKAMQKEYK 851
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 160/365 (43%), Gaps = 29/365 (7%)
Query: 316 IVSGYAISGRIREARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+V Y G + EAR +F+ MP + +V W ++++ Y ++ ++EA+ M+
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D + +L + L + G+ +HG + + V+NAL+ +Y +CG + A
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANIS 491
F M RD +SWN+++ G G A+ FS+M W T S T ++L ACA +
Sbjct: 262 FDSM-HPRDAISWNSMIGGCFSNGWHGTAVDLFSKM-WSQGTEISSVTVLSVLPACAGLG 319
Query: 492 SLEQGKQIHCFVIRN--CYEINVVCRG--------ALVEVYTKCCCLEYAIRVFKE-SSS 540
GK +H + +++ + ++ V G LV +Y KC + A RVF SS
Sbjct: 320 YGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK 379
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVK 595
+V + N ++ G+ E+L +F M + GI PD +L L+C +G V
Sbjct: 380 GNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA 439
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
K G Q +I Y + + + NRMP T+ +
Sbjct: 440 ------HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISW-NSVISG 492
Query: 656 CRKNG 660
C NG
Sbjct: 493 CSSNG 497
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 307/608 (50%), Gaps = 34/608 (5%)
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
Y + LN ++ K G L AR +FD+M RD SW ++ Y L LF
Sbjct: 52 YSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILF 111
Query: 132 LDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
+M H G +Q + L++ A + + + LHG VK G +V + S+L+D Y K
Sbjct: 112 SNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMK 171
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
+ R+F+ + +N VSW I+ + AG E ++ F +M R + + TFA A
Sbjct: 172 VGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIA 231
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L A + S + G IH IK F+ V+ +L MY KCG+ PD
Sbjct: 232 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGK----------PD---- 277
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
Y + LF +M +V+SW +++ Y + + A++ MRK+
Sbjct: 278 ---------YVM--------RLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKS 320
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
++ T +++ CA L+ K G+++HG + R + + V+N+++ +Y KCG L+SA
Sbjct: 321 YVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSA 380
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
+ F+ ++ R+D +SW+ +++ Y++ G ++EA S M+ E +P++F ++L+ C +
Sbjct: 381 SLVFHGIT-RKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGS 439
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
++ LEQGKQ+H ++ + + A++ +Y+KC ++ A ++F D+I +M
Sbjct: 440 MALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAM 499
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + +EA+ +F + G+KPD++ F G+L AC H G V L +F M Y
Sbjct: 500 INGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYR 559
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P EHY C+I L CR G + E E + MPF+ + + CR +G G W A
Sbjct: 560 ISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTA 619
Query: 670 RRLNELNP 677
+L +L+P
Sbjct: 620 EQLLQLDP 627
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 176/375 (46%), Gaps = 16/375 (4%)
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE----------RNIISWTSIVSG 319
+IK+ ++ V L ++ Y+ G + R L+ QP + N++ S +
Sbjct: 7 MIKLLYKETRVALHYISNRYILTGTATECRELIQQPIQEQPAENAYSVHNMLELNSELKQ 66
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVT 378
G++ +AR +F++M R+ ISW ++AGY + EAL F + DQ
Sbjct: 67 LVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFM 126
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ + L CA I G+ +HGF ++ ++FVS+AL+DMY K G + F +M
Sbjct: 127 ISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKM- 185
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS--KFTFETLLAACANISSLEQG 496
R+ VSW A++ G G + E + FSEM W ++ TF L A A+ S L G
Sbjct: 186 MTRNVVSWTAIIAGLVHAGYNMEGLLYFSEM-WRSKVGYDSHTFAIALKASADSSLLHHG 244
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K IH I+ ++ + L +Y KC +Y +R+F++ DV+ ++I +
Sbjct: 245 KAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQM 304
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
A+E F M+K + P+ TF ++ +C + K Q + + G++ L
Sbjct: 305 GEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHV-LRLGLVNALSV 363
Query: 617 YECMIKLYCRYGYMK 631
+I LY + G +K
Sbjct: 364 ANSIITLYSKCGLLK 378
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 142/335 (42%), Gaps = 6/335 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ +A + CA+ A ++ +++ + + N I Y KCG L A
Sbjct: 324 PNKYT-FAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASL 382
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + +D SW+ ++ Y+Q G+ + M G N+ ++VL
Sbjct: 383 VFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMAL 442
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQ+H ++ G ++ S+++ Y KC + +A ++F+ ++ + +SW ++
Sbjct: 443 LEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMING 502
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEG 277
Y G +EA+ +F K+ ++P F L AC+ G ++ +
Sbjct: 503 YAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISP 562
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
G L ++ + GRL +A ++ P + + W++++ + G + R ++
Sbjct: 563 SKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQL 622
Query: 337 PE--RNVISWNAMLAG-YTRSLLWKEALDFVFLMR 368
+ N + LA Y WKEA LM+
Sbjct: 623 LQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMK 657
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 313/625 (50%), Gaps = 40/625 (6%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ +++ +L+ F +F+ N + Y KCG +A +F+ M ERD SWN M+ +
Sbjct: 57 KGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFC 116
Query: 120 QNGFPGRTLELFLDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Q+G ++L +F M G N++ L S A L ++HG +VK+G +
Sbjct: 117 QSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSD 176
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQN-----KNAVSWNVIVRRYLVAGNGKEAVVMF 232
L S+L++ Y KC + +A +F+ I++ +N WNV++ Y+ A+ +F
Sbjct: 177 EFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELF 236
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+ML I P + T L CS L G QIHG+I+ + + D V +L EMY KC
Sbjct: 237 VEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKC 296
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G E + + + N++ W S++ A +G EA E F+E
Sbjct: 297 GDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEF---------------- 340
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
LD F D V L L C+ LS G +HGF + + S++F
Sbjct: 341 -------MLDCGF--------PDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVF 385
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW- 471
V AL+D Y KCG++ A+ FY +S R D VSWNA+++G+A+ ++EA+ +F +MQ
Sbjct: 386 VGGALVDFYGKCGDMEYAQQVFYGLSTR-DLVSWNALISGFAQNKCADEALKAFRDMQSK 444
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+ +P+ T +L+ C ++S + K++HC+++R+ +E N + +L+ Y KC + +
Sbjct: 445 QIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSS 504
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
VF++ + + NS++LGF + R E F MK+ IKPDH TF +L +C H
Sbjct: 505 RTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHS 564
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G V ++F+SM Y + P++E Y CM+ L R G + + D + MP +P +
Sbjct: 565 GKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGS 624
Query: 652 IFDKCRKNGYATLGEWAARRLNELN 676
+ C+ +G L E A + EL+
Sbjct: 625 LLASCKNHGNTKLAEVVANHIFELD 649
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 252/483 (52%), Gaps = 31/483 (6%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL-ELGVSKQLHGLIV 170
N M+ T++GF + ++LD G + + L + L ++ KQ+HG ++
Sbjct: 7 NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
K GF ++ +++SL+ Y KC +A MF+ ++ +++VSWN ++ + +G+ +++V
Sbjct: 67 KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126
Query: 231 MFFKMLREDIRPLNFTFA--NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
MF +M++E + A AL +C+ + G++IHG ++K + D+ ++ +L EM
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEM 186
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y+KCG +++A + + RIR+ NE+ RN+ WN M+
Sbjct: 187 YMKCGDIKNAENVFE---------------------RIRD-----NELVGRNMAVWNVMI 220
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY + AL+ M + D T+ ++L +C+ L ++ +GK++HG I
Sbjct: 221 LGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLD 280
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++ V AL++MY KCG+ ++ + ++ SQ + V W +V+ A+ G EA+ FSE
Sbjct: 281 DDVRVGTALMEMYFKCGDPETS-LQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSE 339
Query: 469 MQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
+ P L AC+ +S +G IH F I+ ++ +V GALV+ Y KC
Sbjct: 340 FMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGD 399
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+EYA +VF S+ D++ N++I GF N+ EAL+ F M+ + IKP+ +T IL
Sbjct: 400 MEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSV 459
Query: 588 CIH 590
C H
Sbjct: 460 CTH 462
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 230/451 (50%), Gaps = 38/451 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD-----EMPER 106
CAS K + ++ LV FL++ IE Y KCG++ +A +F+ E+ R
Sbjct: 152 CASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGR 211
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+ WN M+ Y N LELF++M G+S + T VL ++ L+L V KQ+H
Sbjct: 212 NMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIH 271
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
GLI+ G +V + ++L++ Y KC + ++F QN N V W ++ G
Sbjct: 272 GLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPN 331
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA+ F + + + P AL ACSFLS GM IHG IK+ F+ D V G+L
Sbjct: 332 EALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALV 391
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+ Y KCG +E A+ + R+++SW +++SG+A + EA + F +M + +
Sbjct: 392 DFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKP--- 448
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+ VT+ IL+VC LS + + KEVH ++ R+
Sbjct: 449 ----------------------------NTVTMACILSVCTHLSVMILCKEVHCYLLRHW 480
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ +N V+N+L+ Y KCG++ S+R F ++ R++V+WN++L G+ G+++E +F
Sbjct: 481 FETNALVNNSLISAYAKCGDIHSSRTVFEKLPV-RNEVTWNSILLGFGMHGRTDEMFATF 539
Query: 467 SEM-QWETRPSKFTFETLLAACANISSLEQG 496
+M + +P TF +LL++C++ ++ G
Sbjct: 540 EKMKEANIKPDHGTFTSLLSSCSHSGKVDAG 570
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 169/351 (48%), Gaps = 29/351 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ ++ YGKCG+++ A+ +F + RD SWNA++ + QN L+ F DM
Sbjct: 384 VFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQS 443
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ N +T A +L + + K++H +++ F N ++ +SL+ AY KC +
Sbjct: 444 KQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHS 503
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+R +F+ + +N V+WN I+ + + G E F KM +I+P + TF + L +CS
Sbjct: 504 SRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSH 563
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD----QPDERNI 310
G + +++ D+ + V + ++ + G L A L+ PD+R
Sbjct: 564 SGKVDAGWKYFNSMME-DYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDR-- 620
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNV--ISWNAMLAGYTRSLLWKEA--LDFVFL 366
W S+++ G + A + N + E + + + +LA L++++ L+ VF
Sbjct: 621 -IWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLAN-----LYEDSGNLNEVFR 674
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVS 414
+R DI Q+ L G S I++ +H F+ + +D S +I+ +
Sbjct: 675 VR---TDIKQMG----LKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYAT 718
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + +C ++ +++ L+ + + N I Y KCG++ +R +F+++P
Sbjct: 454 ACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPV 513
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFL---DMNHSGVSANQITYANVLRSSAE 155
R+ +WN++L + G GRT E+F M + + + T+ ++L S +
Sbjct: 514 RNEVTWNSILLGF---GMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSH 563
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/727 (27%), Positives = 330/727 (45%), Gaps = 127/727 (17%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR-------- 97
A + C S A+ AR L LVT VFL N + Y CG L DAR
Sbjct: 8 ADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIK 67
Query: 98 ------------------------GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
LFD MP RD SWN ++ Y Q LE F+
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127
Query: 134 MNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M+ SG S N T+ V++S ++ QL GL K F G+ +E++LVD + +C
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187
Query: 193 VMTDARRMF-------------------------------DDIQNKNAVSWNVIVRRYLV 221
+ A R+F +D+ ++ VSWN+++
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+G +EA+ + +M R+ +R + T+ ++L AC+ L S G Q+H +I+ + D V
Sbjct: 248 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV 307
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L E+Y KCG +EA+ +FN + +RN
Sbjct: 308 ASALIELYAKCGSF-------------------------------KEAKRVFNSLQDRNS 336
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SW ++ G + + ++++ MR IDQ L +++ C ++ +G+++H
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--------------------- 440
++ ++ I VSN+L+ +Y KCG+L++A F MS+R
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 456
Query: 441 ---------RDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACAN 489
R+ ++WNA+L Y + G E+ + +S M Q + P T+ TL CA+
Sbjct: 457 REFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCAD 516
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
I + + G QI ++ +NV A + +Y+KC + A ++F + DV+ N+M
Sbjct: 517 IGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAM 576
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + G++A + F M +G KPD+I++ +L C H G V+ +FD M +G
Sbjct: 577 ITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHG 636
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P LEH+ CM+ L R G++ E +D +++MP PT + + C+ +G L E AA
Sbjct: 637 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAA 696
Query: 670 RRLNELN 676
+ + EL+
Sbjct: 697 KHVFELD 703
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 203/456 (44%), Gaps = 70/456 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + IE Y KCG+ +A+ +F+
Sbjct: 271 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 330
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ SW ++G Q +++ELF M ++ +Q A ++ ++L +
Sbjct: 331 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 390
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKC-----------------------MV------ 193
+QLH L +K G +++ +SL+ Y KC M+
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 450
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANA 250
+ AR FD + +NA++WN ++ Y+ G ++ + M+ ML ++D+ P T+
Sbjct: 451 GNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ + + G QI G +K + V + MY KCGR+ +A+ L D + +++
Sbjct: 511 FRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 570
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A + F++M + + IS+ A+L+G + S L +E + +
Sbjct: 571 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDM 630
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + VHG S + + ++D+ + G+
Sbjct: 631 MTR----------------------------VHGI------SPGLEHFSCMVDLLGRAGH 656
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
L A+ +M + W A+L+ G E A
Sbjct: 657 LTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 692
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 322/665 (48%), Gaps = 75/665 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLES-NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
Y L Q C++ R+ L + + V + N ++ Y + G + AR LFDEM
Sbjct: 9 YVRLLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEM 68
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
PER+ SWN M+ Y +G G +L F DM
Sbjct: 69 PERNYFSWNTMIEGYMNSGDKGTSLR-FFDM----------------------------- 98
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+ + G+ NV+ + + K ++ ARR+FD + K+ V+ N ++ Y++ G
Sbjct: 99 ----MPERDGYSWNVV-----ISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNG 149
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA+ + FK L+ + T L AC+ L + G QIH I+ E D +
Sbjct: 150 YSEEALRL-FKELKFSADAI--TLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNS 206
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +Y KCG L A +L+Q E + S ++++SGYA GR+ E+R LF+ R VI
Sbjct: 207 SLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVIL 266
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN+M++GY + + EAL MR T + D TL ++N C GL ++ GK++H
Sbjct: 267 WNSMISGYIANNMKFEALVLFNEMRNETWE-DSRTLAAVINACIGLGFLETGKQMHCHAC 325
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSA-------------------RIWF---------- 434
+ +I V++ LLDMY KCG+ A +++F
Sbjct: 326 KFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 385
Query: 435 -YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISS 492
++ + + +SWN++ G+++ G E + FS+M P+ + + ++++ACA+ISS
Sbjct: 386 VFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISS 445
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L G+Q+ + + + +L+++Y KC +E RVF D + NSMI G
Sbjct: 446 LGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISG 505
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ N G EA+++F M GI+P ITF +L AC + G V+ F++M+ +G +P
Sbjct: 506 YATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVP 565
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
EH+ CM+ L R GY++E D V MPF+ M + C NGY +G+ A ++
Sbjct: 566 DKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEKI 625
Query: 673 NELNP 677
EL P
Sbjct: 626 IELEP 630
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 169/339 (49%), Gaps = 14/339 (4%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+ V S ++ C S +EA KL S + ++ LLN I+ Y CG +DDA
Sbjct: 331 DDIVVASTLLDMYSKCGSP---MEACKLFSEVESY----DTILLNSMIKVYFSCGRIDDA 383
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+ +F+ + + SWN+M ++QNG P TLE F M+ + ++++ ++V+ + A
Sbjct: 384 KRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASI 443
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LG+ +Q+ G + I+ SSL+D Y KC + + RR+FD + + V WN ++
Sbjct: 444 SSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMI 503
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-- 274
Y G+G EA+ +F KM IRP TF L AC++ EG + +K+D
Sbjct: 504 SGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEA-MKLDHG 562
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REAR 330
F D + ++ + G +E+A L+++ P + + W+S++ G +G ++
Sbjct: 563 FVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVA 622
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
E E+ N +++ + A + S W+ + LMR+
Sbjct: 623 EKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 661
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/727 (27%), Positives = 330/727 (45%), Gaps = 127/727 (17%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR-------- 97
A + C S A+ AR L LVT VFL N + Y CG L DAR
Sbjct: 8 ADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIK 67
Query: 98 ------------------------GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
LFD MP RD SWN ++ Y Q LE F+
Sbjct: 68 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127
Query: 134 MNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M+ SG S N T+ V++S ++ QL GL K F G+ +E++LVD + +C
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187
Query: 193 VMTDARRMF-------------------------------DDIQNKNAVSWNVIVRRYLV 221
+ A R+F +D+ ++ VSWN+++
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+G +EA+ + +M R+ +R + T+ ++L AC+ L S G Q+H +I+ + D V
Sbjct: 248 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV 307
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L E+Y KCG +EA+ +FN + +RN
Sbjct: 308 ASALIELYAKCGSF-------------------------------KEAKRVFNSLQDRNS 336
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SW ++ G + + ++++ MR IDQ L +++ C ++ +G+++H
Sbjct: 337 VSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSL 396
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--------------------- 440
++ ++ I VSN+L+ +Y KCG+L++A F MS+R
Sbjct: 397 CLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKA 456
Query: 441 ---------RDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACAN 489
R+ ++WNA+L Y + G E+ + +S M Q + P T+ TL CA+
Sbjct: 457 REFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCAD 516
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
I + + G QI ++ +NV A + +Y+KC + A ++F + DV+ N+M
Sbjct: 517 IGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAM 576
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + G++A + F M +G KPD+I++ +L C H G V+ +FD M +G
Sbjct: 577 ITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHG 636
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P LEH+ CM+ L R G++ E +D +++MP PT + + C+ +G L E AA
Sbjct: 637 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAA 696
Query: 670 RRLNELN 676
+ + EL+
Sbjct: 697 KHVFELD 703
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 203/456 (44%), Gaps = 70/456 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + IE Y KCG+ +A+ +F+
Sbjct: 271 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 330
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ SW ++G Q +++ELF M ++ +Q A ++ ++L +
Sbjct: 331 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 390
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKC-----------------------MV------ 193
+QLH L +K G +++ +SL+ Y KC M+
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 450
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANA 250
+ AR FD + +NA++WN ++ Y+ G ++ + M+ ML ++D+ P T+
Sbjct: 451 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ + + G QI G +K + V + MY KCGR+ +A+ L D + +++
Sbjct: 511 FRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 570
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A + F++M + + IS+ A+L+G + S L +E + +
Sbjct: 571 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDM 630
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + VHG S + + ++D+ + G+
Sbjct: 631 MTR----------------------------VHGI------SPGLEHFSCMVDLLGRAGH 656
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
L A+ +M + W A+L+ G E A
Sbjct: 657 LTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 692
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/619 (28%), Positives = 308/619 (49%), Gaps = 36/619 (5%)
Query: 77 VFLLNRAIECYGKC--GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
+++ N + Y KC G+L+ A LFDEMP +D +WN M+ Y ++G G E M
Sbjct: 34 IYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSM 93
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G A+ T+ ++L+ A + +Q+H LIVK G+ +V S+L+D Y KC +
Sbjct: 94 KRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERV 153
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA +F + +N VSWN ++ ++ G+ A + M +E +R + TFA L
Sbjct: 154 EDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLL 213
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
MQ+H IIK E + + + Y +CG LEDA+ + D
Sbjct: 214 DGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFD----------- 262
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ R++++WN+ML Y ++A + M+ +
Sbjct: 263 -------------------GAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEP 303
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN--LRSARI 432
D T +++ C + GK H + + ++ + NAL+ MY K N + +A
Sbjct: 304 DIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALN 363
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANIS 491
F+ M + +D+VSWN++LTG+++ G SE+A+ F M+ + + +L +C++++
Sbjct: 364 LFHSM-KSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLA 422
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
L+ G+QIH ++ ++ N +L+ +Y+KC +E A + F++++ I NS++
Sbjct: 423 ILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMF 482
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ + +G AL++F +M++ +K DH+TF +L AC H G V+ SM YGI
Sbjct: 483 AYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIP 542
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P++EHY C + L+ R GY++E + ++ MPF P +L+ + CR G L A +
Sbjct: 543 PRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQ 602
Query: 672 LNELNPWAPFQFKITTNRF 690
L E+ P + I +N +
Sbjct: 603 LLEVEPEEHCTYVILSNMY 621
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 39/361 (10%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN--LDDARGLFDEMPERDGGSW 111
S A+V R LE + V + N I Y K N ++ A LF M +D SW
Sbjct: 326 SFHALVIKRGLEES---------VTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSW 376
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N++L ++Q GF L+LF M S + Y+ VLRS ++ L + +Q+H L VK
Sbjct: 377 NSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVK 436
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF N + SSL+ Y KC ++ DA + F+D +++++WN I+ Y G G A+ +
Sbjct: 437 TGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDL 496
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV------LGSL 285
F M +++ + TF L ACS + G+ G + E D +
Sbjct: 497 FSIMREREVKLDHVTFVAVLTACSHV-----GLVEQGRCVLKSMESDYGIPPRMEHYACA 551
Query: 286 TEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEM----PERN 340
+++ + G LE+A+ L+D P + N + +++ G I A ++ +++ PE +
Sbjct: 552 VDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEH 611
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
++ + Y W + LMR+ + + +V G S I++ EVH
Sbjct: 612 C-TYVILSNMYGHLKRWDDKASVTRLMRE--RKVKKV---------PGWSWIEVKNEVHA 659
Query: 401 F 401
F
Sbjct: 660 F 660
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 296/595 (49%), Gaps = 35/595 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K G+L AR LFD MP+R +W ++G Y N +LF M S
Sbjct: 79 NTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTL 138
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE--SSLVDAYGKCMVMTDAR 198
+ +T+ +L + + Q+H VK GF N+ L + L+ +Y + + A
Sbjct: 139 PDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLAC 198
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+F++I +K++V++N ++ Y G EA+ +F KM + +P +FTF+ L A L
Sbjct: 199 VLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLH 258
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+HG+ + F D V + Y K
Sbjct: 259 DFALGQQLHGLSVTTGFSRDASVGNQILHFYSK--------------------------- 291
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
R+ E R LFNEMPE + +S+N +++ Y+++ ++E+L+ M+ D
Sbjct: 292 ----HDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFP 347
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L++ A LS +++G++VH S + V N+L+DMY KC A + F +S
Sbjct: 348 FATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLS 407
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
QR VSW A+++GY ++G + F++M+ R + TF T+L A A +SL GK
Sbjct: 408 QR-STVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGK 466
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H F+IR+ NV LV++Y KC ++ A++VF+E + + N++I + N
Sbjct: 467 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNG 526
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
G A+ F M + G++PD ++ G+L+AC H G V+ +FF +M YGI P+ +HY
Sbjct: 527 DGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHY 586
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
CM+ L R G E E ++ MPF P M + + CR +L E AA +L
Sbjct: 587 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQL 641
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 209/470 (44%), Gaps = 40/470 (8%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N + ++++ Y K ++ AR +FD + ++ V+W +++ Y + EA +F +M
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD--DVVLGSLTEMYVKCGR 294
R P TF L C+ Q+H +K+ F+ + V L + Y + R
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L+ A L ++ +++ +++ ++++GY G
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDG------------------------------ 223
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L+ EA+ MR++ T +L GL + +G+++HG +S + V
Sbjct: 224 -LYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVG 282
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ---W 471
N +L Y K + R F +M + D VS+N V++ Y++ Q EE++ F EMQ +
Sbjct: 283 NQILHFYSKHDRVLETRNLFNEMPE-LDFVSYNVVISSYSQAEQYEESLNLFREMQCMGF 341
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+ R F F T+L+ AN+SSL+ G+Q+HC I + + +LV++Y KC + A
Sbjct: 342 DRR--NFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEA 399
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+FK S + ++I G+ L++F M+ ++ D TF +L A
Sbjct: 400 ELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGF 459
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ L Q + + G + + ++ +Y + G +K+ MP
Sbjct: 460 ASLLLGKQ-LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 508
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 10/322 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + + A+ ++ R++ + + + N ++ Y KC D+A +F +
Sbjct: 348 FATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLS 407
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+R SW A++ Y Q G G L+LF M + + A+Q T+A VL++SA L + KQ
Sbjct: 408 QRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQ 467
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I++ G NV S LVD Y KC + DA ++F+++ ++NAVSWN ++ Y G+
Sbjct: 468 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGD 527
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS---FLSSPYEGMQIHGVIIKIDFEGDDVV 281
G+ A+ F KM++ ++P + + L ACS F+ E Q I I +
Sbjct: 528 GEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKH-- 585
Query: 282 LGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAI----SGRIREARELFNEM 336
+ ++ + GR +A L+D+ P E + I W+S+++ I S R A +LF+
Sbjct: 586 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSME 645
Query: 337 PERNVISWNAMLAGYTRSLLWK 358
R+ ++ +M Y + W+
Sbjct: 646 KLRDAAAYVSMSNIYAAAGKWE 667
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 149/329 (45%), Gaps = 4/329 (1%)
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
P ++ IIK F D E ++ G++ A + D+ +N +S +++SG
Sbjct: 25 PPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISG 84
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y G + AR LF+ MP+R V++W ++ Y + + EA M ++ D VT
Sbjct: 85 YVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTF 144
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF--VSNALLDMYRKCGNLRSARIWFYQM 437
+L C +VH F + + +N+F V N LL Y + L A + F ++
Sbjct: 145 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI 204
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+D V++N ++TGY + G EA+ F +M Q +PS FTF +L A + G
Sbjct: 205 LD-KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALG 263
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+Q+H + + + ++ Y+K + +F E LD + N +I +
Sbjct: 264 QQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQA 323
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGIL 585
E+ E+L +F M+ G + F +L
Sbjct: 324 EQYEESLNLFREMQCMGFDRRNFPFATML 352
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K TK +L++D+ S +A + + A +++ ++L + ++ VF +
Sbjct: 432 KLFTKMRGANLRADQ----STFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGL 487
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG++ DA +F+EMP+R+ SWNA++ AY NG + F M SG+ +
Sbjct: 488 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDS 547
Query: 144 ITYANVL 150
++ VL
Sbjct: 548 VSILGVL 554
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 296/595 (49%), Gaps = 100/595 (16%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR------- 217
+H ++K GF V +++ L+DAY KC + D R++FD + +N +WN +V
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 218 -------------------RYLVAGNGK----EAVVMFFKMLREDIRPLN-FTFANALFA 253
+V+G + E + +F M+ ++ LN +TFA+ L A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS L+ G+QIH +I K D + +L +MY KCG + D
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVND---------------- 205
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
A+++F+EM +RNV+SWN+++ Y ++ EAL +M ++ +
Sbjct: 206 ---------------AQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVE 250
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSARI 432
D+VTL +++ CA LS IK+G+EVH + + D N I +SNA +DMY KC ++ AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 433 WFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSEEA 462
F M R R+ VSWNA++ GY + G++EEA
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 463 MTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY------EINVVCR 515
++ F ++ E+ P+ +TF +L ACA+++ L G Q H V+++ + E ++
Sbjct: 371 LSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+++Y KC C+E VF++ D + N+MI+GF N G EALE+F M G K
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEK 490
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PDHIT G+L AC H G V+ +F SM +G+ P +HY CM+ L R G+++E +
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + + C+ + TLG++ A +L E+ + + +N +
Sbjct: 551 IIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMY 605
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 273/504 (54%), Gaps = 41/504 (8%)
Query: 43 SLYAHLFQLCASSK-AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
S +A L C K + ++ R + ++++ + VF+ NR I+ Y KCG+L+D R LFD
Sbjct: 20 SPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFD 79
Query: 102 EMP-------------------------------ERDGGSWNAMLGAYTQNGFPGRTLEL 130
+MP ERD +WN+M+ + Q+ L
Sbjct: 80 KMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYY 139
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M+ G N+ T+A+ L + + ++ Q+H LI K +V + S+LVD Y K
Sbjct: 140 FAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSK 199
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + DA+++FD++ ++N VSWN ++ Y G EA+ +F ML + P T A+
Sbjct: 200 CGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASV 259
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERN 309
+ AC+ LS+ G ++H ++K+D +D++L + +MY KC R+++AR + D RN
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+I+ TS+VSGYA++ + AR +F +M ERNV+SWNA++AGYT++ +EAL L+++
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEV------HGFIHRNDYSSNIFVSNALLDMYRK 423
+ T IL CA L+++ +G + HGF ++ +IFV N+L+DMY K
Sbjct: 380 ESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG + + F +M + RD VSWNA++ G+A+ G EA+ F EM +P T
Sbjct: 440 CGCVEEGYLVFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIG 498
Query: 483 LLAACANISSLEQGKQIHCFVIRN 506
+L+AC + +E+G+ + R+
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRD 522
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 209/388 (53%), Gaps = 37/388 (9%)
Query: 247 FANALFACSFLS-SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
FA L +C L S + +H +IK F + + L + Y KCG LED R L D+
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+RN+ +W S+V+G G + EA LF MPER+ +WN+M++G+ + +EAL +
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+M K +++ T L+ C+GL+++ G ++H I ++ S++++ +AL+DMY KCG
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCG 201
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETL 483
N+ A+ F +M R+ VSWN+++T Y + G + EA+ F M W P + T ++
Sbjct: 202 NVNDAQQVFDEMGD-RNVVSWNSLITCYEQNGPAVEALKVFQVMLESW-VEPDEVTLASV 259
Query: 484 LAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYA--------IR- 533
++ACA++S+++ G+++H V++ + +++ A V++Y KC ++ A IR
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 534 ----------------------VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+F + + +V+ N++I G+ N EAL +F L+K+
Sbjct: 320 VIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQ 599
E + P H TF IL AC ++ L +Q
Sbjct: 380 ESVCPTHYTFANILKACADLADLHLGMQ 407
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/616 (29%), Positives = 315/616 (51%), Gaps = 34/616 (5%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
LN I Y KCG + A +F M RD SW+AM+ + N R L F+DM +G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMV-MTD 196
N+ +A R+ + + V + G +VK G+ +V + L+D + K +
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++F+ + +NAV+W +++ R + G EA+ +F +M+ P FT + + AC+
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G Q+H I+ D V L MY KC
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC------------------------ 319
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW-KEALDFVFLMRKTTKDID 375
++ G + AR++F+++ + NV SW AM+ GY + + +EALD M T +
Sbjct: 320 ----SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPN 375
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
T L CA L+ +++G++V + +SS V+N+L+ MY + G + AR F
Sbjct: 376 HFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD 435
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLE 494
+ ++ + +S+N V+ YA+ SEEA+ F+E++ + S FTF +LL+ A+I ++
Sbjct: 436 ILFEK-NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIG 494
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G+QIH VI++ ++N AL+ +Y++C +E A +VF++ +VI S+I GF
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFA 554
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ +ALE+F M +EG++P+ +T+ +L AC H G V + F SM ++G+IP++
Sbjct: 555 KHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CM+ + R G + E F+N MP+ + R CR +G LG+ AA+ + E
Sbjct: 615 EHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674
Query: 675 LNPWAPFQFKITTNRF 690
P P + + +N +
Sbjct: 675 QEPHDPAAYILLSNLY 690
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 213/455 (46%), Gaps = 54/455 (11%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC-----YG 88
L EP ++L + + CA+ + ++ ++L S + T L+R + C Y
Sbjct: 264 LSGYEPDRFTL-SGVISACANMELLLLGQQLHSQAIRHGLT-----LDRCVGCCLINMYA 317
Query: 89 KC---GNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVSANQI 144
KC G++ AR +FD++ + + SW AM+ Y Q G + L+LF M + V N
Sbjct: 318 KCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHF 377
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+++ L++ A L + +Q+ VK GF + +SL+ Y + + DAR+ FD +
Sbjct: 378 TFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL 437
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
KN +S+N ++ Y N +EA+ +F ++ + + FTFA+ L + + + +G
Sbjct: 438 FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE 497
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QIH +IK + + V +L MY +CG +E A + + ++RN+ISWTSI++G+A G
Sbjct: 498 QIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHG 557
Query: 325 RIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+A ELF++M E N++++ A+L+ + L E
Sbjct: 558 FATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNE--------------------- 596
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
G K HG I R ++ + ++D+ + G+L A + M +
Sbjct: 597 -------GWKHFKSMYTEHGVIPRMEHYA------CMVDILGRSGSLSEAIQFINSMPYK 643
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
D + W L G R + E ++M E P
Sbjct: 644 ADALVWRTFL-GACRVHGNLELGKHAAKMIIEQEP 677
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 248/567 (43%), Gaps = 53/567 (9%)
Query: 112 NAMLGAYTQ---NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
N + G Q NG + + M H G + TY+ L+ + +H
Sbjct: 32 NPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEK 91
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKE 227
+ + + + +SL+ Y KC A +F + +++ +SW+ +V + G
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLT 286
A++ F M+ P + FA A ACS G I G ++K + DV +G L
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLI 211
Query: 287 EMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+M+VK G L A + ++ ERN ++WT +++ G EA +LF EM
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM--------- 262
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+L+GY + D+ TL +++ CA + + +G+++H R+
Sbjct: 263 -ILSGY---------------------EPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 406 DYSSNIFVSNALLDMYRKC---GNLRSARIWFYQMSQRRDKVSWNAVLTGYARR-GQSEE 461
+ + V L++MY KC G++ +AR F Q+ + SW A++TGY ++ G EE
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILD-HNVFSWTAMITGYVQKGGYDEE 359
Query: 462 AMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F M P+ FTF + L ACAN+++L G+Q+ ++ + +L+
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y + ++ A + F ++I N++I + N EALE+F ++ +G+ T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE----LEDF 636
F +L G + Q + K G+ +I +Y R G ++ ED
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARV-IKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYAT 663
+R + T I K+G+AT
Sbjct: 539 EDRNVISWT-----SIITGFAKHGFAT 560
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 176/368 (47%), Gaps = 28/368 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + CA+ A+ ++ ++ V + + N I Y + G +DDAR FD +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E++ S+N ++ AY +N LELF ++ G+ A+ T+A++L +A +G +Q
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++K G N + ++L+ Y +C + A ++F+D++++N +SW I+ + G
Sbjct: 499 IHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGF 558
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
+A+ +F KML E +RP T+ L ACS + EG + HGVI +++
Sbjct: 559 ATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEH-- 616
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELF 333
+ ++ + G L +A ++ P + + + W + + + G + + A ++
Sbjct: 617 ----YACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMI 672
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
E + ++ + Y + W E + +RK K+ + + AG S ++
Sbjct: 673 IEQEPHDPAAYILLSNLYASTSKWDEVSN----IRKAMKEKNLIKE-------AGCSWVE 721
Query: 394 MGKEVHGF 401
+ +VH F
Sbjct: 722 VENKVHKF 729
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 316/653 (48%), Gaps = 58/653 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y L + + C ++ + R + + F+ N I Y +CG+ A
Sbjct: 141 PTPYVL-SSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAER 199
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F +MP RD ++N ++ + Q LE+F +M SG+S + +T +++L + A +
Sbjct: 200 VFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGD 259
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L QLH + K G + I+E SL+D Y KC + A +F+ N V WN+I+
Sbjct: 260 LQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVA 319
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + ++ +F +M IRP FT+ L C+ G QIH + +K FE D
Sbjct: 320 FGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESD 379
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V G L +MY K G LE AR +L+ + E
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEM-------------------------------LKE 408
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW +M+AGY + K+AL M+K D + L ++ CAG+ ++ G ++
Sbjct: 409 KDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQI 468
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H ++ + YS ++ + NAL+++Y +CG +R A F ++ + +D+++WN +++G+A+ G
Sbjct: 469 HARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGL 527
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ F M Q + + FTF + L+A AN++ ++QGKQIH VI+ + A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC E A F E S + + N++I + RG EAL+ F MKKEG
Sbjct: 588 LISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEG---- 643
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
L +F SM KYGI P+ +HY C+I ++ R G + + FV
Sbjct: 644 --------------------LSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFV 683
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP + R + C+ + +GE AA+ L EL P + + +N +
Sbjct: 684 EEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAY 736
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 269/584 (46%), Gaps = 41/584 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F+E+ RD SW AML Y QNG L L+ M+ +GV
Sbjct: 81 NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVV 140
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++VL S + + +H K+GFC + ++L+ Y +C A R+
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERV 200
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ +++ V++N ++ + +G+ A+ +F +M + P T ++ L AC+ L
Sbjct: 201 FYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDL 260
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H + K D ++ GSL ++YVKCG +E A + + + N++ W I+ +
Sbjct: 261 QKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAF 320
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ ++ ELF +M + +Q T
Sbjct: 321 GQINDLAKSFELFCQMQTAGIRP-------------------------------NQFTYP 349
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C EI +G+++H + + S+++VS L+DMY K G L AR +M +
Sbjct: 350 CILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARR-VLEMLKE 408
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
+D VSW +++ GY + ++A+ +F EMQ W P + ++ CA I ++ QG
Sbjct: 409 KDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIW---PDNIGLASAISGCAGIKAMRQG 465
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH V + Y +V ALV +Y +C + A F+E D I N ++ GF +
Sbjct: 466 LQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL+VF M + G+K + TF L A + +K Q + K G + E
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEV 584
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
+I LY + G ++ + + M V I C ++G
Sbjct: 585 GNALISLYGKCGSFEDAKMEFSEMSERNEVSW-NTIITSCSQHG 627
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 244/533 (45%), Gaps = 37/533 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGV 161
M R S L + P + L LF D + +A LR+ V
Sbjct: 1 MTRRGAASLGWSLAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++H + RG + I+ + L+D Y K ++ ARR+F+++ ++ VSW ++ Y
Sbjct: 61 VPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G G+EA+ ++ +M R + P + ++ L +C+ +G +H K F + V
Sbjct: 121 NGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFV 180
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+L +Y++CG A R D P R+ +++ +++SG+A A E+F EM
Sbjct: 181 GNALITLYLRCGSFRLAERVFYDMP-HRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSG 239
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ D VT+ +L CA L +++ G ++H
Sbjct: 240 L-------------------------------SPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++ + SS+ + +LLD+Y KCG++ +A + F + R + V WN +L + +
Sbjct: 269 YLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF-NLGNRTNVVLWNLILVAFGQINDLA 327
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
++ F +MQ RP++FT+ +L C ++ G+QIH ++ +E ++ G L+
Sbjct: 328 KSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLI 387
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y+K LE A RV + DV+ SMI G+ +E ++AL F M+K GI PD+I
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNI 447
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ C ++ LQ + G + + ++ LY R G ++E
Sbjct: 448 GLASAISGCAGIKAMRQGLQIHARVYVS-GYSGDVSIWNALVNLYARCGRIRE 499
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 305/615 (49%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F N + YGK G L AR LFD MPER+ S+ ++ A+ Q G LF +
Sbjct: 96 LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRW 155
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G NQ +L+ + G++ +H K G N + S L+DAY C +++D
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ I K+AV W +V Y + A +F KM +P F + L A
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC 275
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG IK + + V G+L +MY KCG ++DAR + ++I + +
Sbjct: 276 LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFM 335
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+S YA S + +A ELF + +V+ ++
Sbjct: 336 ISRYAQSNQNEQAFELFLRLMRSSVLP-------------------------------NE 364
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L +L C + ++ GK++H + + S++FV NAL+D Y KC ++ S+ F
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ 495
+ + ++VSWN ++ G+++ G EEA++ F EMQ P ++ T+ ++L ACA+ +S+
Sbjct: 425 L-RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH 483
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
QIHC + ++ + + V +L++ Y KC + A++VF+ D+I N++I G+
Sbjct: 484 AGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYAL 543
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + +ALE+F M K ++ + ITF +L C G V L FDSMR +GI P +E
Sbjct: 544 HGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSME 603
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C+++L R G + + F+ +P P+ + R + C + LG ++A ++ E+
Sbjct: 604 HYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEI 663
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 664 EPQDETTYVLLSNMY 678
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 197/404 (48%), Gaps = 33/404 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P YSL + + Q C + + +++ ++ + +F+ N ++ Y KC ++D +
Sbjct: 362 PNEYSL-SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 420
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + + + SWN ++ ++Q+G L +F +M + + Q+TY++VLR+ A
Sbjct: 421 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 480
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + Q+H I K F + ++ +SL+D Y KC + DA ++F + ++ +SWN I+
Sbjct: 481 IRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISG 540
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQI-HGVII 271
Y + G +A+ +F +M + ++ + TF L CS S ++ M+I HG I
Sbjct: 541 YALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG--I 598
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---R 327
K E ++ + + GRL DA + D P + + W +++S I + R
Sbjct: 599 KPSMEHYTCIV----RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+ E E+ ++ ++ + Y + +LD V L+RK+ ++I +
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAA----GSLDQVALLRKSMRNIG-------VRKVP 703
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
GLS +++ E+H F + ++ V NA+L+ NL+++R
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWL----NLKTSR 743
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
A Y +L W E + + +D L C + + G+ VHG + R
Sbjct: 32 AAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGV 91
Query: 409 S--NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
++F +N LL+MY K G L SAR F +M + R+ VS+ ++ +A+RG E A F
Sbjct: 92 GRLDLFCANVLLNMYGKLGPLASARRLFDRMPE-RNMVSFVTLVQAHAQRGDFEAAAALF 150
Query: 467 SEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
++WE ++F T+L + + +H + ++ N L++ Y+ C
Sbjct: 151 RRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLC 210
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
+ A VF D ++ +M+ + N+ A VF M+ G KP+ +L
Sbjct: 211 SLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVL 270
Query: 586 LACI 589
A +
Sbjct: 271 KAAV 274
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 305/615 (49%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F N + YGK G L AR LFD MPER+ S+ ++ A+ Q G LF +
Sbjct: 96 LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRW 155
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G NQ +L+ + G++ +H K G N + S L+DAY C +++D
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ I K+AV W +V Y + A +F KM +P F + L A
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC 275
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG IK + + V G+L +MY KCG ++DAR + ++I + +
Sbjct: 276 LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFM 335
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+S YA S + +A ELF + +V+ ++
Sbjct: 336 ISRYAQSNQNEQAFELFLRLMRSSVLP-------------------------------NE 364
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L +L C + ++ GK++H + + S++FV NAL+D Y KC ++ S+ F
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ 495
+ + ++VSWN ++ G+++ G EEA++ F EMQ P ++ T+ ++L ACA+ +S+
Sbjct: 425 L-RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH 483
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
QIHC + ++ + + V +L++ Y KC + A++VF+ D+I N++I G+
Sbjct: 484 AGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYAL 543
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + +ALE+F M K ++ + ITF +L C G V L FDSMR +GI P +E
Sbjct: 544 HGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSME 603
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C+++L R G + + F+ +P P+ + R + C + LG ++A ++ E+
Sbjct: 604 HYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEI 663
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 664 EPQDETTYVLLSNMY 678
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 148/300 (49%), Gaps = 15/300 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P YSL + + Q C + + +++ ++ + +F+ N ++ Y KC ++D +
Sbjct: 362 PNEYSL-SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 420
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + + + SWN ++ ++Q+G L +F +M + + Q+TY++VLR+ A
Sbjct: 421 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 480
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + Q+H I K F + ++ +SL+D Y KC + DA ++F + ++ +SWN I+
Sbjct: 481 IRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISG 540
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQI-HGVII 271
Y + G +A+ +F +M + ++ + TF L CS S ++ M+I HG I
Sbjct: 541 YALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG--I 598
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREAR 330
K E ++ + + GRL DA + D P + + W +++S I + R
Sbjct: 599 KPSMEHYTCIV----RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 9/304 (2%)
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
A Y +L W E + + +D L C + + G+ VHG + R
Sbjct: 31 FAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGG 90
Query: 408 SS--NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++F +N LL+MY K G L SAR F +M + R+ VS+ ++ +A+RG E A
Sbjct: 91 VGRLDLFCANVLLNMYGKLGPLASARRLFDRMPE-RNMVSFVTLVQAHAQRGDFEAAAAL 149
Query: 466 FSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F ++WE ++F T+L + + +H + ++ N L++ Y+
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C + A VF D ++ +M+ + N+ A VF M+ G KP+ +
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY--ECMIKLYCRYGYMKELEDFVNRMPF 642
L A + +V L C + E + ++ +Y + G +K+ +P+
Sbjct: 270 LKAAVCLPSVVLGKGIHG---CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY 326
Query: 643 NPTV 646
+ +
Sbjct: 327 DDVI 330
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 310/640 (48%), Gaps = 82/640 (12%)
Query: 77 VFLLNRAIECYGKCG-NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
V L NR ++ Y +CG + DA LFDEMPER+ SWN M+ Y + G R+L+LF M
Sbjct: 41 VSLANRLLQMYARCGGTMTDAHNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMP 100
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
K + NV+ + + K +
Sbjct: 101 Q----------------------------------KNDYSWNVV-----ISGFAKAGELD 121
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL------NFTFAN 249
A+++F+++ +N V+WN ++ Y G +EAV +F ++ + PL F A+
Sbjct: 122 VAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKEL---NSNPLEKSCGDTFVLAS 178
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
+ AC+ L + G Q+H I+ D E D V++ SL +Y KCG L+ A +L DE +
Sbjct: 179 VIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVD 238
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
S ++++ GYA GR+ +A +F + WN++++GY + +A V M+
Sbjct: 239 DFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKN 298
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC----- 424
+D T+ +IL+ C+ + K++HG++ + ++ V++A +D Y KC
Sbjct: 299 NRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPND 358
Query: 425 --------------------------GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
G +R A+ F M + +SWN+++ G A+
Sbjct: 359 ACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSK-SLISWNSIIVGLAQNAY 417
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA+ F +M + + R +F+ ++++ACA ISSLE G+Q+ I E + +
Sbjct: 418 PLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTS 477
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV+ Y KC +E ++F D + NSM++G+ N G E L +F MK+ G++P
Sbjct: 478 LVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLRPT 537
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
ITF G+L AC H G V+ ++F+ M+ Y I P +EHY CM+ L+ R G +KE + V
Sbjct: 538 DITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLV 597
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
MPF M + C +G LG+ A+++ +LNP
Sbjct: 598 EHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNP 637
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 247/507 (48%), Gaps = 39/507 (7%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P + N I + K G LD A+ LF+EMP R+G +WN+M+ Y +NGF
Sbjct: 95 LFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYARNGFAREA 154
Query: 128 LELFLDMNHSGVS---ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
+ LF ++N + + + A+V+ + A+ + KQ+H I+ + +L SSL
Sbjct: 155 VGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSL 214
Query: 185 VDAYGKC-----------MV--------------------MTDARRMFDDIQNKNAVSWN 213
++ Y KC M+ M+DA R+F N V WN
Sbjct: 215 INLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWN 274
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y+ +A + +M ++ + T L ACS + Q+HG + K+
Sbjct: 275 SLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKV 334
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+V + + Y KC DA L + + + S+++ Y GRIR+A+ +F
Sbjct: 335 GLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIF 394
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
MP +++ISWN+++ G ++ EALD M K +D+ +L +++ CA +S ++
Sbjct: 395 ETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLE 454
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+G++V S+ VS +L+D Y KCG + + R F M + D+VSWN++L GY
Sbjct: 455 LGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMI-KTDEVSWNSMLMGY 513
Query: 454 ARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN- 511
A G E +T F+EM Q RP+ TF +L+AC + +E+G++ +++ Y I+
Sbjct: 514 ATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWF-NIMKYDYHIDP 572
Query: 512 -VVCRGALVEVYTKCCCLEYAIRVFKE 537
+ +V+++ + CL+ A+ + +
Sbjct: 573 GIEHYSCMVDLFARAGCLKEALNLVEH 599
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 131/565 (23%), Positives = 232/565 (41%), Gaps = 142/565 (25%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKC-MVMTDARRMFD 202
+ A +L+S + KQLH L +K+G V L + L+ Y +C MTDA +FD
Sbjct: 7 SLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFD 66
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
++ +N SWN ++ Y+ G+ + ++ +F D+ P
Sbjct: 67 EMPERNCFSWNTMIEGYMRVGDKERSLKLF------DLMPQ------------------- 101
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
K D+ + V+ G + K G L+ A+ L ++ RN ++W S++ GYA
Sbjct: 102 ---------KNDYSWNVVISG-----FAKAGELDVAKKLFNEMPRRNGVAWNSMIHGYAR 147
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G REA LF E+ + K+ D L +
Sbjct: 148 NGFAREAVGLFKELNSNP--------------------------LEKSCG--DTFVLASV 179
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ CA L I+ GK+VH I +D + + ++L+++Y KCG+L +A + +M D
Sbjct: 180 IGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTAN-YVLKMMDEVD 238
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSE------MQWETRPSKF------------------ 478
S +A++ GYA G+ +A+ F + W + S +
Sbjct: 239 DFSLSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKN 298
Query: 479 --------TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
T +L+AC++ + + KQ+H +V + +V+ A ++ Y+KC
Sbjct: 299 NRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPND 358
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGR------------------------------ 560
A ++F E + D ++ NSMI +C+ R R
Sbjct: 359 ACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYP 418
Query: 561 -EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EAL+VFG M K ++ D + ++ AC +++L Q F II LE +
Sbjct: 419 LEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVF-----ARAIITGLESDQA 473
Query: 620 ----MIKLYCRYGYMKELEDFVNRM 640
++ YC+ G+++ + M
Sbjct: 474 VSTSLVDFYCKCGFIENGRKLFDSM 498
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 143/286 (50%), Gaps = 12/286 (4%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+A KL S L + LLN I Y CG + DA+ +F+ MP + SWN+++
Sbjct: 358 DACKLFSELKAY----DTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLA 413
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGN 177
QN +P L++F MN + ++ + A+V+ + A LELG +Q+ + G +
Sbjct: 414 QNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELG--EQVFARAIITGLESD 471
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ +SLVD Y KC + + R++FD + + VSWN ++ Y G G E + +F +M +
Sbjct: 472 QAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQ 531
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRL 295
+RP + TF L AC EG + I+K D+ D + + +++ + G L
Sbjct: 532 AGLRPTDITFTGVLSACDHCGLVEEGRKWFN-IMKYDYHIDPGIEHYSCMVDLFARAGCL 590
Query: 296 EDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
++A L++ P E + W+S++ G G +++ ++ + N
Sbjct: 591 KEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLN 636
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 140/354 (39%), Gaps = 101/354 (28%)
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKC-GNLRSA 430
D++ +L +L S I GK++H F+ + ++ + ++N LL MY +C G + A
Sbjct: 2 DLELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDA 61
Query: 431 RIWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSE 460
F +M +R ++ SWN V++G+A+ G+ +
Sbjct: 62 HNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELD 121
Query: 461 EAMTSFSEM-----------------------------QWETRP------SKFTFETLLA 485
A F+EM + + P F +++
Sbjct: 122 VAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIG 181
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY--------------- 530
ACA++ ++E GKQ+H ++ + E++ V +L+ +Y KC L+
Sbjct: 182 ACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFS 241
Query: 531 ----------------AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
A+R+F+ S+ ++ NS+I G+ +N +A + MK +
Sbjct: 242 LSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRV 301
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY--CR 626
+ D T IL AC GN + A Q + CK G+I + I Y CR
Sbjct: 302 QVDSSTITVILSACSSTGNAQYAKQMHGYV-CKVGLIDSVIVASAFIDAYSKCR 354
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/595 (29%), Positives = 304/595 (51%), Gaps = 33/595 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKC +L+DA F M ER+ SW A + QN R LELF+ M G+ +Q
Sbjct: 178 VDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQ 237
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+V RS A L ++QLH +K F + ++ +++VD Y K + DARR F
Sbjct: 238 PAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFS 297
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N + N ++ + G G EA+ +F M R I + + AC+ + +G
Sbjct: 298 LPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQG 357
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+Q+H + IK F+ D V ++ ++Y KC L +A + + ++R+ +S
Sbjct: 358 LQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS----------- 406
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
WNA++A ++ +++ + ++ M + + D T G +L
Sbjct: 407 --------------------WNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVL 446
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAGL ++ G VHG ++ + FVS+ ++DMY KCG + A+ ++ ++
Sbjct: 447 KACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG-QEL 505
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWN++++G++ QSEEA FSEM +P FT+ T+L CAN++++E GKQIH
Sbjct: 506 VSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQ 565
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+I+ + LV++Y KC + ++ +F+++ LD + N+MI G+ + +G EA
Sbjct: 566 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEA 625
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
LE+F M++ + P+H TF +L AC H G + ++F M +Y + PQLEH+ CM+
Sbjct: 626 LEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVD 685
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R +E F+ MP + + + C+ + E AA + L+P
Sbjct: 686 ILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDP 740
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/592 (28%), Positives = 273/592 (46%), Gaps = 70/592 (11%)
Query: 45 YAHLFQLCASS--KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
++HL+QLCA + A+ + + ++ P F+ N ++ Y +CG ARG+FD
Sbjct: 5 FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELF------------------------------- 131
MP RD SWN ML AY G G LF
Sbjct: 65 MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124
Query: 132 LDMNHSGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
++M GV+ ++ T A +L++ E+L LGV Q+H + VK G +V S+LVD YG
Sbjct: 125 VEMARRGVAPDRTTLAVLLKACGGLEDLALGV--QIHAVAVKTGLEMDVRAGSALVDMYG 182
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + DA R F + +N+VSW + + + +F +M R + +A+
Sbjct: 183 KCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
+C+ ++ Q+H IK F D VV ++ ++Y K L DAR
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDAR---------- 292
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
R F+ +P V + NAM+ G R+ L EAL M +
Sbjct: 293 --------------------RAFFS-LPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTR 331
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ D V+L + + CA + G +VH ++ + ++ V NA+LD+Y KC L
Sbjct: 332 SGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVE 391
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA 488
A + F +M Q RD VSWNA++ + E+ + +EM ++ P FT+ ++L ACA
Sbjct: 392 AYLVFQEMEQ-RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACA 450
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ SLE G +H I++ ++ +V++Y KC + A ++ +++ NS
Sbjct: 451 GLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNS 510
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+I GF N++ EA + F M G+KPDH T+ +L C + ++L Q
Sbjct: 511 IISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQI 562
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 176/346 (50%), Gaps = 2/346 (0%)
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
F+ L A + S+ G H ++ F V L +MY +CG ARG+ D
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
R+ +SW ++++ YA +G A LF MP+ +V+SWNA+L+GY + ++++++
Sbjct: 64 VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
M + D+ TL ++L C GL ++ +G ++H + ++ +AL+DMY K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFET 482
C +L A +F+ M + R+ VSW A + G + Q + F +MQ S+ + +
Sbjct: 184 CRSLEDALRFFHGMGE-RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+ +CA I+ L +Q+H I+N + + V A+V+VY K L A R F +
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
V CN+M++G G EAL++F M + GI D ++ G+ AC
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSAC 348
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 165/307 (53%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+F CA K ++ ++ + V + N ++ YGKC L +A +F EM +RD
Sbjct: 344 VFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRD 403
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWNA++ A QN T+ +M G+ + TY +VL++ A L +HG
Sbjct: 404 SVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHG 463
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+K G + + S++VD Y KC ++T+A+++ D I + VSWN I+ + + +E
Sbjct: 464 KAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEE 523
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A F +ML ++P +FT+A L C+ L++ G QIHG IIK + GD+ + +L +
Sbjct: 524 AQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVD 583
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + D+ + ++ + + +SW +++ GYA+ G+ EA E+F M + NV+ +A
Sbjct: 584 MYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHAT 643
Query: 348 LAGYTRS 354
R+
Sbjct: 644 FVAVLRA 650
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 219/517 (42%), Gaps = 71/517 (13%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + H ++ GF + + L+ Y +C AR +FD + +++ VSWN ++
Sbjct: 20 LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTA 79
Query: 219 YLVAGNGKEAVVMF-------------------------------FKMLREDIRPLNFTF 247
Y AG+ A +F +M R + P T
Sbjct: 80 YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
A L AC L G+QIH V +K E D +L +MY KC LEDA E
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
RN +SW G AI+G ++ NE YTR L+ M
Sbjct: 200 RNSVSW-----GAAIAGCVQ------NEQ--------------YTR------GLELFVQM 228
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
++ + Q + CA ++ + +++H +N +S++ V A++D+Y K +L
Sbjct: 229 QRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSL 288
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS----KFTFETL 483
AR F+ + + + NA++ G R G EA+ F Q+ TR + +
Sbjct: 289 VDARRAFFSLPNHTVQ-ACNAMMVGLVRTGLGAEALQLF---QFMTRSGIGFDVVSLSGV 344
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
+ACA + QG Q+HC I++ ++++V R A++++Y KC L A VF+E D
Sbjct: 345 FSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDS 404
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ N++I NE + + M + G++PD T+ +L AC +++
Sbjct: 405 VSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYG-SVVHG 463
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
K G+ ++ +YC+ G + E + +R+
Sbjct: 464 KAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRI 500
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 1/220 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP ++ Y + + CA +++ + + F+ + ++ Y KCG + +A+
Sbjct: 436 EPDDFT-YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQ 494
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
L D + ++ SWN+++ ++ N + F +M GV + TYA VL + A
Sbjct: 495 KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLA 554
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ + KQ+HG I+K+ G+ + S+LVD Y KC M D+ MF+ Q + VSWN ++
Sbjct: 555 TIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMIC 614
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
Y + G G EA+ MF +M + ++ P + TF L ACS +
Sbjct: 615 GYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHV 654
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 279/536 (52%), Gaps = 35/536 (6%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N +SL+ Y K + DA +F ++ +++AVSW +++ +G +AV F M+
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
E P FT N L +C+ + + G ++H ++K+ V S+ MY KCG E
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
AR + ++ R++ SW +VS Y GR+ A +F M ER+++SWN ++AGY ++ L
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459
Query: 357 WKEALDFVF-LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
AL F ++ ++ + D T+ +L+ CA L +KMGK++H +I R + + N
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 416 ALLDMYRKCGNLRSAR-------------IWF-------------------YQMSQRRDK 443
AL+ Y K G++ +AR I F + + RD
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCF 502
++W A++ GY + GQ++EAM F M P+ T +L+ACA+++ L+ GKQIHC
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHNERGRE 561
IR+ E +V A++ VY + + A RVF + + I SMI+ + G +
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+ +F M + G+KPDHIT+ G+L AC H G V ++++ M+ ++GI+PQ+ HY CM+
Sbjct: 700 AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L+ R G + E +F+ RMP P + + CR A L E AA +L ++P
Sbjct: 760 DLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDP 815
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/491 (29%), Positives = 244/491 (49%), Gaps = 37/491 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+L A+ + S EAR L ++ Y F N + Y K G L DA +F E
Sbjct: 249 NLLAYYASVGVSRGCFREARCLFDDIP--YARRNAFTWNSLLSLYAKSGRLPDAHVVFAE 306
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+RD SW M+ ++G ++ FLDM G + +Q T NVL S A GV
Sbjct: 307 MPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVG 366
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+++H +VK G V + +S++ YGKC AR +F+ +Q ++ SWNV+V Y
Sbjct: 367 RKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQ 426
Query: 223 GNGKEAVVMFFKMLREDI--------------------------------RPLNFTFANA 250
G + AV MF M+ I P FT +
Sbjct: 427 GRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSV 486
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP--DER 308
L AC+ L G Q+H I++ ++ +L Y K G +E AR ++DQ +
Sbjct: 487 LSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADL 546
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
N+IS+T+++ GY G ++ARE+F+ M R+VI+W AM+ GY ++ EA++ M
Sbjct: 547 NVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMI 606
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ + TL +L+ CA L+ + GK++H R+ ++ VSNA++ +Y + G++
Sbjct: 607 LIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVP 666
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAAC 487
AR F Q+ R++ ++W +++ A+ G E+A+ F EM + +P T+ +L+AC
Sbjct: 667 LARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSAC 726
Query: 488 ANISSLEQGKQ 498
A+ +++GK+
Sbjct: 727 AHAGFVDKGKR 737
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 208/486 (42%), Gaps = 100/486 (20%)
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR----LEDARGLL 302
+A L C +P G IH +K + +L Y G +AR L
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 303 DQPD--ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
D RN +W S++S YA SGR+ +A +F EMP+R+ +SW M+ G RS + +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+ M Q TL +L+ CA + +G++VH F+ + SS + V+N++L M
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 421 YRKCGNLRSARIWFYQMSQR------------------------------RDKVSWNAVL 450
Y KCG+ +AR F +M R R VSWN ++
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451
Query: 451 TGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRN-- 506
GY + G A+ FS M + P FT ++L+ACAN+ L+ GKQ+H +++R
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGM 511
Query: 507 -------------------------------CYEINVVCRGALVEVYTKCCCLEYAIRVF 535
++NV+ AL+E Y K + A +F
Sbjct: 512 PCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIF 571
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
++ DVI +MI+G+ N + EA+E+F M G +P+ T +L AC
Sbjct: 572 DIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC-----AS 626
Query: 596 LA-LQFFDSMRCKYGIIPQLEHYE-----CMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
LA L + + CK I L+ +I +Y R G +VP+
Sbjct: 627 LAYLDYGKQIHCK--AIRSLQEQSVSVSNAIITVYARSG----------------SVPLA 668
Query: 650 RKIFDK 655
R++FD+
Sbjct: 669 RRVFDQ 674
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 202/517 (39%), Gaps = 126/517 (24%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L ++ CA+ +A RK+ +V + V + N + YGKCG+ + AR
Sbjct: 345 PSQFTL-TNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARA 403
Query: 99 LFDEMPERDGGSWNAM-------------------------------LGAYTQNGFPGRT 127
+F+ M R SWN M + Y QNG G
Sbjct: 404 VFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMA 463
Query: 128 LELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CG--------- 176
L+ F M + S + + T +VL + A L + KQ+H I++ G C
Sbjct: 464 LKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIS 523
Query: 177 -----------------------NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
NVI ++L++ Y K AR +FD + N++ ++W
Sbjct: 524 TYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWT 583
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y G EA+ +F M+ P + T A L AC+ L+ G QIH I+
Sbjct: 584 AMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS 643
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN-IISWTSIVSGYAISGRIREAREL 332
E V ++ +Y + G + AR + DQ R I+WTS++ A G +A L
Sbjct: 644 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVL 703
Query: 333 FNEMPERNV----ISWNAMLAG------------------------------------YT 352
F EM V I++ +L+ +
Sbjct: 704 FEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHA 763
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC-----AGLSEIKMGKEVHGFIHRNDY 407
R+ L EA +F+ M D V G +L C A L+E+ GK + + +
Sbjct: 764 RAGLLTEAHEFIQRMPVAP---DTVVWGSLLAACRVRKNADLAELAAGK----LLSIDPH 816
Query: 408 SSNIFVSNALLDMYRKCGNLR-SARIWFYQMSQRRDK 443
+S + +AL ++Y CG +ARIW R+DK
Sbjct: 817 NSGAY--SALANVYSACGRWNDAARIW----KLRKDK 847
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 17/295 (5%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L++ P S + L A S ++ AR++ V V +E Y K G+
Sbjct: 507 LRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVV--ADLNVISFTALLEGYVKLGDT 564
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
AR +FD M RD +W AM+ Y QNG +ELF M G N T A VL +
Sbjct: 565 KQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC 624
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSW 212
A L KQ+H ++ +V + ++++ Y + + ARR+FD I K ++W
Sbjct: 625 ASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS---FLSSP---YEGMQ- 265
++ G G++AVV+F +M+R ++P + T+ L AC+ F+ YE MQ
Sbjct: 685 TSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQN 744
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
HG++ ++ + +++ + G L +A + + P + + W S+++
Sbjct: 745 EHGIVPQMSH------YACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 300/613 (48%), Gaps = 37/613 (6%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
ARKL + P V N I Y K GNL AR LFD M +R +W ++G Y Q
Sbjct: 61 ARKLFDEM----PHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQ 116
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
+ LF DM G+ + IT A +L E + Q+HG +VK G+ +++
Sbjct: 117 HNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMV 176
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
+SL+D+Y K + A +F + K+ V++N ++ Y G +A+ +FFKM
Sbjct: 177 CNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGF 236
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
RP FTFA L A + G Q+H ++K +F + V +L + Y K
Sbjct: 237 RPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSK--------- 287
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
RI EAR+LF EMPE + IS+N ++ + +E+
Sbjct: 288 ----------------------HDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEES 325
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
L+ ++ T D Q +L++ A ++MG+++H D S + V N+L+DM
Sbjct: 326 LELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDM 385
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFT 479
Y KC A F ++ + V W A+++GY ++G E+ + F EM + T
Sbjct: 386 YAKCDKFGEANRIFADLAHQ-SSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSAT 444
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+ ++L ACAN++SL GKQ+H +IR+ NV ALV++Y KC ++ A+++F+E
Sbjct: 445 YASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMP 504
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
+ + N++I + N G AL F M G++P+ ++F IL AC H G V+ LQ
Sbjct: 505 VRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQ 564
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
+F+SM Y + P+ EHY M+ + CR G E E + RMPF P M I + CR +
Sbjct: 565 YFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIH 624
Query: 660 GYATLGEWAARRL 672
L AA +L
Sbjct: 625 KNQELAIKAADQL 637
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 252/550 (45%), Gaps = 66/550 (12%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAML 115
+++ E ++ ++V + + N ++ Y K +L A LF M E+D ++NA+L
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALL 212
Query: 116 GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
Y++ GF + LF M G ++ T+A VL + + ++ +Q+H +VK F
Sbjct: 213 TGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFV 272
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
NV + ++L+D Y K + +AR++F ++ + +S+NV++ G +E++ +F ++
Sbjct: 273 WNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFREL 332
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
F FA L + + G QIH I D + +V SL +MY KC +
Sbjct: 333 QFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKF 392
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+A + ++ + WT+++SGY G + +LF EM +
Sbjct: 393 GEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKI-------------- 438
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
D T IL CA L+ + +GK++H I R+ SN+F +
Sbjct: 439 -----------------GADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGS 481
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETR 474
AL+DMY KCG+++ A F +M R+ VSWNA+++ YA+ G A+ SF +M +
Sbjct: 482 ALVDMYAKCGSIKEALQMFQEMPV-RNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQ 540
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P+ +F ++L AC++ +E+G Q Y Y +
Sbjct: 541 PNSVSFLSILCACSHCGLVEEGLQ-----------------------YFNSMTQVYKLEP 577
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
+E + SM+ C + R EA + LM + +PD I + IL +C N
Sbjct: 578 RREHYA-------SMVDMLCRSGRFDEAEK---LMARMPFEPDEIMWSSILNSCRIHKNQ 627
Query: 595 KLALQFFDSM 604
+LA++ D +
Sbjct: 628 ELAIKAADQL 637
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 167/312 (53%), Gaps = 3/312 (0%)
Query: 257 LSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L+SP Q + +IK F+ + + +++ G L AR L D+ +N+IS +
Sbjct: 19 LTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNT 78
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++ GY SG + AR LF+ M +R+V++W ++ GY + + EA + M + D
Sbjct: 79 MIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPD 138
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+TL +L+ + +VHG + + Y S + V N+LLD Y K +L A F
Sbjct: 139 HITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFK 198
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
M++ +D V++NA+LTGY++ G + +A+ F +MQ RPS+FTF +L A + +E
Sbjct: 199 HMAE-KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIE 257
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+Q+H FV++ + NV AL++ Y+K + A ++F E +D I N +I
Sbjct: 258 FGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCA 317
Query: 555 HNERGREALEVF 566
N R E+LE+F
Sbjct: 318 WNGRVEESLELF 329
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 161/319 (50%), Gaps = 6/319 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L + A+S + R++ S + V + N ++ Y KC +A +F ++
Sbjct: 344 FATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLA 403
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ W A++ Y Q G L+LF++M+ + + A+ TYA++LR+ A L + KQ
Sbjct: 404 HQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQ 463
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I++ G NV S+LVD Y KC + +A +MF ++ +N+VSWN ++ Y G+
Sbjct: 464 LHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGD 523
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
G A+ F +M+ ++P + +F + L ACS EG+Q + ++ E
Sbjct: 524 GGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYA 583
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGR----IREARELFNEMPE 338
S+ +M + GR ++A L+ + P E + I W+SI++ I I+ A +LFN
Sbjct: 584 SMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGL 643
Query: 339 RNVISWNAMLAGYTRSLLW 357
R+ + +M Y + W
Sbjct: 644 RDAAPYVSMSNIYAAAGEW 662
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 187/674 (27%), Positives = 325/674 (48%), Gaps = 67/674 (9%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V+ + Y + + CA + + + + L ++L N I Y K G++ +
Sbjct: 76 VNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQV 135
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F M RD +W++M+ AY N P + + F M + + N+IT+ ++L++ L
Sbjct: 136 FRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSML 195
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
++++H ++ G +V + ++L+ Y KC ++ A +F ++ +N VSW I++
Sbjct: 196 EKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQAN 255
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
EA ++ KML+ I P TF + L +C+ + G +IH I + E D
Sbjct: 256 AQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDV 315
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
VV +L MY KC ++DAR D+ +R++ISW+++++GYA SG + +
Sbjct: 316 VVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSG--------YQD---- 363
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFL----MRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
KE+LD VF MR+ ++VT IL C+ ++ G
Sbjct: 364 ------------------KESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG 405
Query: 396 KEVHGFIHRNDYSS-------------------------------NIFVSNALLDMYRKC 424
+++H I + + S N+ +LL MY KC
Sbjct: 406 RQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKC 465
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETL 483
G+L SA F +MS R+ VSWN ++ GYA+ G + S M+ E +P + T ++
Sbjct: 466 GDLTSAEKVFSEMST-RNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISI 524
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L AC +S+LE+GK +H ++ E + V +L+ +Y+KC + A VF + S+ D
Sbjct: 525 LEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDT 584
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ N+M+ G+ + G EA+++F M KE + P+ ITF ++ AC G V+ + F
Sbjct: 585 VAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRI 644
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT 663
M+ + + P +HY CM+ L R G ++E E+F+ RMP P + + + C+ +
Sbjct: 645 MQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQ 704
Query: 664 LGEWAARRLNELNP 677
L EWAA + L P
Sbjct: 705 LAEWAAHHILRLEP 718
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 236/521 (45%), Gaps = 80/521 (15%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
++L + G+ N TY ++ A+ K +H + + G ++ L +SL++
Sbjct: 62 AIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLIN 121
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y K + ++F + ++ V+W+ ++ Y + +A F +M +I P T
Sbjct: 122 FYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRIT 181
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
F + L AC+ S + +IH V+ E D V +L MY KCG + A + +
Sbjct: 182 FLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMK 241
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
ERN++SWT+I+ A ++ EA EL+ +M + IS NA
Sbjct: 242 ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG-ISPNA-------------------- 280
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
VT +LN C + G+ +H I +++ V+NAL+ MY KC
Sbjct: 281 ----------VTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC 330
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRG-QSEEAMTSFSEMQWETR-----PSKFTF 480
++ AR F +MS +RD +SW+A++ GYA+ G Q +E++ ++ R P+K TF
Sbjct: 331 IQDARETFDRMS-KRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTF 389
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEI------------------------------ 510
++L AC+ +LEQG+QIH + + +E
Sbjct: 390 MSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN 449
Query: 511 -NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
NVV +L+ +Y KC L A +VF E S+ +V+ N MI G+ + + E+ M
Sbjct: 450 KNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509
Query: 570 KKEGIKPDHITFHGILLAC-----------IHEGNVKLALQ 599
K EG +PD +T IL AC +H VKL L+
Sbjct: 510 KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLE 550
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 227/542 (41%), Gaps = 94/542 (17%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L C + +A+ R++ S++ V + N I Y KC + DAR FD M
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMS 342
Query: 105 ERDGGSWNAMLGAYTQNGFPGR-----TLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
+RD SW+AM+ Y Q+G+ + +L M GV N++T+ ++L++ + L
Sbjct: 343 KRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGAL 402
Query: 160 GVSKQLHGLIVKRGF----------------CG---------------NVILESSLVDAY 188
+Q+H I K GF CG NV+ +SL+ Y
Sbjct: 403 EQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMY 462
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
KC +T A ++F ++ +N VSWN+++ Y +G+ + + M E +P T
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTII 522
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+ L AC LS+ G +H +K+ E D VV SL MY KC
Sbjct: 523 SILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKC---------------- 566
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
G + EAR +F+++ R+ ++WNAMLAGY + + EA+D M
Sbjct: 567 ---------------GEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRML 611
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGN 426
K +++T +++ C ++ G+E+ I + D+ + ++D+ + G
Sbjct: 612 KERVPPNEITFTAVISACGRAGLVQEGREIFR-IMQEDFRMKPGKQHYGCMVDLLGRAGR 670
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM----------------- 469
L+ A + +M D W+A+L + A + +
Sbjct: 671 LQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNI 730
Query: 470 -----QWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+W+ T+ K + L SS+E +IH FV +C + A +E+
Sbjct: 731 YAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEML 790
Query: 523 TK 524
TK
Sbjct: 791 TK 792
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 198/431 (45%), Gaps = 39/431 (9%)
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V R AG KEA+ + + + + + T+ + C+ L +G +H + ++
Sbjct: 50 VWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGL 109
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D + SL Y K G + + + R++++W+S+++ YA + +A + F
Sbjct: 110 AIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFER 169
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M + N+ + +++T IL C S ++
Sbjct: 170 MKDANI-------------------------------EPNRITFLSILKACNNYSMLEKA 198
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+E+H + + +++ V+ AL+ MY KCG + A F +M + R+ VSW A++ A+
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKE-RNVVSWTAIIQANAQ 257
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+ EA + +M Q P+ TF +LL +C +L +G++IH + E +VV
Sbjct: 258 HRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVV 317
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE-RGREAL-EVFGL---M 569
AL+ +Y KC C++ A F S DVI ++MI G+ + + +E+L EVF L M
Sbjct: 318 ANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERM 377
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
++EG+ P+ +TF IL AC G ++ Q + K G + +Y + G
Sbjct: 378 RREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI-SKVGFESDRSLQTAIFNMYAKCGS 436
Query: 630 MKELEDFVNRM 640
+ E E ++M
Sbjct: 437 IYEAEQVFSKM 447
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 157/322 (48%), Gaps = 15/322 (4%)
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
KEA+ + ++++ ++ T G I+ CA L + GK VH + + +I++ N+L
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPS 476
++ Y K G++ S F +M+ RD V+W++++ YA +A +F M+ P+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTL-RDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+ TF ++L AC N S LE+ ++IH V + E +V AL+ +Y+KC + A +F+
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ +V+ ++I + + EA E++ M + GI P+ +TF +L +C N
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSC----NTPE 294
Query: 597 AL---QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
AL + S + G+ + +I +YC+ +++ + +RM + I
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMI- 353
Query: 654 DKCRKNGYATLGEWAARRLNEL 675
GYA G L+E+
Sbjct: 354 -----AGYAQSGYQDKESLDEV 370
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 305/615 (49%), Gaps = 33/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F N + YGK G L AR LFD MPER+ S+ ++ A+ Q G LF +
Sbjct: 96 LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRW 155
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G NQ +L+ + G++ +H K G N + S L+DAY C +++D
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ I K+AV W +V Y + A +F KM +P F + L A
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC 275
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG IK + + V G+L +MY KCG ++DAR + ++I + +
Sbjct: 276 LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFM 335
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+S YA S + +A ELF + +V+ ++
Sbjct: 336 ISRYAQSNQNEQAFELFLRLMRSSVLP-------------------------------NE 364
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L +L C + ++ GK++H + + S++FV NAL+D Y KC ++ S+ F
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ 495
+ + ++VSWN ++ G+++ G EEA++ F EMQ P ++ T+ ++L ACA+ +S+
Sbjct: 425 L-RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH 483
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
QIHC + ++ + + V +L++ Y KC + A++VF+ D+I N++I G+
Sbjct: 484 AGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYAL 543
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + +ALE+F M K ++ + ITF +L C G V L FDSMR +GI P +E
Sbjct: 544 HGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSME 603
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C+++L R G + + F+ +P P+ + R + C + LG ++A ++ E+
Sbjct: 604 HYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEI 663
Query: 676 NPWAPFQFKITTNRF 690
P + + +N +
Sbjct: 664 EPQDETTYVLLSNMY 678
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 197/404 (48%), Gaps = 33/404 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P YSL + + Q C + + +++ ++ + +F+ N ++ Y KC ++D +
Sbjct: 362 PNEYSL-SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 420
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + + + SWN ++ ++Q+G L +F +M + + Q+TY++VLR+ A
Sbjct: 421 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 480
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + Q+H I K F + ++ +SL+D Y KC + DA ++F + ++ +SWN I+
Sbjct: 481 IRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISG 540
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQI-HGVII 271
Y + G +A+ +F +M + ++ + TF L CS S ++ M+I HG I
Sbjct: 541 YALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG--I 598
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---R 327
K E ++ + + GRL DA + D P + + W +++S I + R
Sbjct: 599 KPSMEHYTCIV----RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+ E E+ ++ ++ + Y + +LD V L+RK+ ++I +
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAA----GSLDQVALLRKSMRNIG-------VRKVP 703
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
GLS +++ E+H F + ++ V NA+L+ NL+++R
Sbjct: 704 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWL----NLKTSR 743
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 127/304 (41%), Gaps = 9/304 (2%)
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
A Y +L W E + + +D L C + + G+ VHG + R
Sbjct: 31 FAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGG 90
Query: 408 SS--NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++F +N LL+MY K G L SAR F +M + R+ VS+ ++ +A+RG E A
Sbjct: 91 VGRLDLFCANVLLNMYGKLGPLASARRLFDRMPE-RNMVSFVTLVQAHAQRGDFEAAAAL 149
Query: 466 FSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F ++WE ++F T+L + + +H + ++ N L++ Y+
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C + A VF D ++ +M+ + N+ A VF M+ G KP+ +
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY--ECMIKLYCRYGYMKELEDFVNRMPF 642
L A + +V L C + E + ++ +Y + G +K+ +P+
Sbjct: 270 LKAAVCLPSVVLGKGIHG---CAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPY 326
Query: 643 NPTV 646
+ +
Sbjct: 327 DDVI 330
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 191/669 (28%), Positives = 322/669 (48%), Gaps = 57/669 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + ++C+ + ++ +V V + ++ Y K ++ +F +P
Sbjct: 141 FAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 200
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E++ SW+A++ QN L+ F +M +Q YA+VLRS A EL + Q
Sbjct: 201 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 260
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH +K F + I+ ++ +D Y KC M DA+ +FD +N N S+N ++ Y +
Sbjct: 261 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEH 320
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G +A+++F +++ + + + AC+ + EG+QI+ + IK D V +
Sbjct: 321 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANA 380
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+MY KC L EA +F+EM R+ +SW
Sbjct: 381 AIDMYGKCQALA-------------------------------EAFRVFDEMRRRDAVSW 409
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA++A + ++ E L M ++ + D+ T G +L C G S + G E+H I +
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGS-LGYGMEIHSSIVK 468
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK-------------------VS 445
+ +SN V +L+DMY KCG + A + QR + VS
Sbjct: 469 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVS 528
Query: 446 WNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN++++GY + QSE+A F+ M + P KFT+ T+L CAN++S GKQIH VI
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ + +V LV++Y+KC L + +F++S D + N+MI G+ H+ +G EA++
Sbjct: 589 KKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQ 648
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+F M E IKP+H+TF IL AC H G + L++F M+ YG+ PQL HY M+ +
Sbjct: 649 LFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDIL 708
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC---RKNGYATLGEWAARRLNELNPWAPF 681
+ G +K + + MPF + R + C R N + E A L L+P
Sbjct: 709 GKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNN--VEVAEEATAALLRLDPQDSS 766
Query: 682 QFKITTNRF 690
+ + +N +
Sbjct: 767 AYTLLSNVY 775
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 252/463 (54%), Gaps = 14/463 (3%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K + VS S+YA + + CA+ + +L ++ + + ++ Y KC N+
Sbjct: 232 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 291
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA+ LFD+ + S+NAM+ Y+Q + L LF + SG+ ++I+ + V R+ A
Sbjct: 292 DAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 351
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L Q++ L +K +V + ++ +D YGKC + +A R+FD+++ ++AVSWN
Sbjct: 352 LVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 411
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ + G G E + +F MLR I P FTF + L AC+ S Y GM+IH I+K
Sbjct: 412 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSLGY-GMEIHSSIVKSG 470
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ V SL +MY KCG +E+A + + +R +SG + E ++ N
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRT-----------NVSGTMEELEKMHN 519
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ + +SWN++++GY ++A M + D+ T +L+ CA L+ +
Sbjct: 520 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 579
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK++H + + + S++++S+ L+DMY KCG+L +R+ F + S RRD V+WNA++ GYA
Sbjct: 580 GKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMF-EKSLRRDFVTWNAMICGYA 638
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
G+ EEA+ F M E +P+ TF ++L ACA++ +++G
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 681
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 284/585 (48%), Gaps = 65/585 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ L L Q+ +S+ V A S + P V N+ I Y K N+ A
Sbjct: 39 PTTFVLNC-LLQVYTNSRDFVSA----SMVFDRMPLRDVVSWNKMINGYAKSNNMVKASF 93
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEE 156
F+ MP RD SWN+ML Y QNG +++E+F+DM +G + T+A +L+ S E+
Sbjct: 94 FFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLED 153
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LG+ Q+HG++V+ G +V+ S+L+D Y K ++ R+F I KN+VSW+ I+
Sbjct: 154 TSLGM--QIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 211
Query: 217 RRYLVAGNGKEAVVMFFK-MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V N + FFK M + + +A+ L +C+ LS G Q+H +K DF
Sbjct: 212 AG-CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 270
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D +V + +MY KC ++DA+ L D+ + N S+ ++++GY+ +A LF+
Sbjct: 271 AADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHR 330
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
L L F D+++L + CA + + G
Sbjct: 331 --------------------LMSSGLGF-----------DEISLSGVFRACALVKGLSEG 359
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++ ++ S ++ V+NA +DMY KC L A F +M +RRD VSWNA++ + +
Sbjct: 360 LQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQ 418
Query: 456 RGQSEEAMTSF-SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G+ E + F S ++ P +FTF ++L AC SL G +IH ++++ N
Sbjct: 419 NGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSV 477
Query: 515 RGALVEVYTKCCCLEYAIRVFKE-------SSSLDVI----------IC---NSMILGFC 554
+L+++Y+KC +E A ++ S +++ + +C NS+I G+
Sbjct: 478 GCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 537
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
E+ +A +F M + GI PD T+ +L C + + L Q
Sbjct: 538 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 582
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 239/535 (44%), Gaps = 72/535 (13%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LELG KQ H ++ GF + + L+ Y A +FD + ++ VSWN ++
Sbjct: 22 LELG--KQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMI 79
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNF------------------------------- 245
Y + N +A F M D+ N
Sbjct: 80 NGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGR 139
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
TFA L CS L GMQIHGV++++ + D V +L +MY K R ++ +
Sbjct: 140 TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
E+N +SW++I++G + N++S AL F
Sbjct: 200 PEKNSVSWSAIIAGCV----------------QNNLLSL---------------ALKFFK 228
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M+K + Q +L CA LSE+++G ++H ++D++++ V A LDMY KC
Sbjct: 229 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 288
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLL 484
N++ A+I F + S+ ++ S+NA++TGY++ +A+ F M + + +
Sbjct: 289 NMQDAQILFDK-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVF 347
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
ACA + L +G QI+ I++ ++V A +++Y KC L A RVF E D +
Sbjct: 348 RACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 407
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N++I N +G E L +F M + I+PD TF +L AC G++ ++ S+
Sbjct: 408 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSI 466
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELED----FVNRMPFNPTVPMLRKIFDK 655
K G+ +I +Y + G ++E E F R + T+ L K+ +K
Sbjct: 467 -VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNK 520
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 183/361 (50%), Gaps = 2/361 (0%)
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
L F N C+ + G Q H +I F VL L ++Y A +
Sbjct: 5 LRFLRMNRAVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVF 64
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
D+ R+++SW +++GYA S + +A FN MP R+V+SWN+ML+GY ++ ++++
Sbjct: 65 DRMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIE 124
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
M + + D T +IL VC+ L + +G ++HG + R +++ ++ALLDMY
Sbjct: 125 VFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYA 184
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFE 481
K G + +Q ++ VSW+A++ G + A+ F EMQ S+ +
Sbjct: 185 K-GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 243
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
++L +CA +S L G Q+H +++ + + + R A +++Y KC ++ A +F +S +L
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENL 303
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+ N+MI G+ E G +AL +F + G+ D I+ G+ AC + LQ +
Sbjct: 304 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 363
Query: 602 D 602
D
Sbjct: 364 D 364
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 84 IECYGKCGNLDDAR-------------GLFDEMPERDGG-------SWNAMLGAYTQNGF 123
I+ Y KCG +++A G +E+ + SWN+++ Y
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 541
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
LF M G++ ++ TYA VL + A G+ KQ+H ++K+ +V + S+
Sbjct: 542 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISST 601
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LVD Y KC + D+R MF+ ++ V+WN ++ Y G G+EA+ +F +M+ E+I+P
Sbjct: 602 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 661
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGL 301
+ TF + L AC+ + +G++ + ++K D+ D + ++ ++ K G+++ A L
Sbjct: 662 HVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 720
Query: 302 L-DQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + P E + + W +++ I EA + ++ ++ + Y + +
Sbjct: 721 IREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGM 780
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W++ D MR G L G S +++ E+H F+
Sbjct: 781 WEKVSDLRRNMR-----------GFKLKKEPGCSWVELKDELHVFL 815
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 296/572 (51%), Gaps = 62/572 (10%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
TYA++L S L LG KQ+H +K GF G+ +E+ L+ YG+ + DA +F +
Sbjct: 64 TYASLLES-CRTLNLG--KQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+N SW I+ ++ G +EA+ +F K+ +DI F F L C L G
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGR 180
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+HGV+IK +C + A + +N++S+ +++ GY +G
Sbjct: 181 QLHGVVIK------------------RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 222
Query: 325 RIREARELFNEMP--ERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGL 381
+ +A+ELF++M ++ ISWN+M++GY +LL+ EAL F L+ + + D TLG
Sbjct: 223 NVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGS 282
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L CA ++ ++ GKEVH N FV AL++MY KC +L++A++ F +++R
Sbjct: 283 VLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTER- 341
Query: 442 DKVSWNAVLTGYA-----------------------------------RRGQSEEAMTSF 466
D +WN +++GYA G +E A+ F
Sbjct: 342 DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLF 401
Query: 467 SEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+EMQ + RP +T +L ACA ++++ +GKQ+H IR YE++V ALV++Y KC
Sbjct: 402 TEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKC 461
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
+++A++V+ S+ +++ N+M+ + + G E + +F M G +PDH+TF +L
Sbjct: 462 GSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVL 521
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
+C+H G V+ +FFD M Y + P L+HY C++ L R G + E + V ++P P
Sbjct: 522 SSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPD 580
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M + C G LGE AA L EL P
Sbjct: 581 SVMWGALLGGCVIWGNVELGEIAAESLIELEP 612
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/609 (27%), Positives = 285/609 (46%), Gaps = 62/609 (10%)
Query: 13 LSKSSPKPTPSKTLTKTISGHLKS---DEPVSYSLYAHLFQLCASSKAIVEARKLESNLV 69
LS SP TP T + H D+ + S YA L + C + + +++ ++ +
Sbjct: 30 LSFQSPNSTPQSMHLSTAAHHTHLSLLDKQIDSSTYASLLESC---RTLNLGKQVHAHTL 86
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
F+ + ++ YG+ G LDDA +F +MP+R+ SW A+L + +G+ L
Sbjct: 87 KTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALS 146
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR------------GF-CG 176
LF + + + VL+ L + +QLHG+++KR GF
Sbjct: 147 LFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVK 206
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQ--NKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
NV+ ++++ Y + + A+ +FD ++ K+ +SWN ++ Y EA+ MF
Sbjct: 207 NVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRD 266
Query: 235 MLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+L E+ I +FT + L AC+ ++S G ++H + + V G+L EMY KC
Sbjct: 267 LLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCE 326
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVISWNAMLA 349
L+ A+ D ER+ +W ++SGYA ++ + L +M E NV +WN +++
Sbjct: 327 DLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIIS 386
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
G+ + + AL M+ ++ D T+G+IL CA L+ I GK+VH R Y
Sbjct: 387 GHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYEL 446
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++ + AL+DMY KCG+++ A + Y + VS NA+LT YA G +E + F M
Sbjct: 447 DVHIGAALVDMYAKCGSIKHA-MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNM 505
Query: 470 QWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
RP TF ++L++C + ++E G + F + Y + + YT C+
Sbjct: 506 LGNGFRPDHVTFLSVLSSCVHAGAVETGHEF--FDLMTYYNVTPSLKH-----YT---CI 555
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ + + LD E + L+KK KPD + + +L C
Sbjct: 556 ---VDLLSRAGRLD---------------------EAYELVKKIPRKPDSVMWGALLGGC 591
Query: 589 IHEGNVKLA 597
+ GNV+L
Sbjct: 592 VIWGNVELG 600
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 310/620 (50%), Gaps = 50/620 (8%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ ++L+TFY +PP LL A + D GL RD SWN++L +++
Sbjct: 51 VSNSLITFYCSPPRPLLGAAFAVFA-----DIPAGL------RDVASWNSLLNPLSRHQ- 98
Query: 124 PGRTLELFLDMNHS--GVSANQITYANVLRSSAEELELGVSKQLHGLIVK---RGFCGNV 178
P L F M S V ++A V ++A H K NV
Sbjct: 99 PLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNV 158
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++L++ Y K ++DARR+FD + ++NAVSW +V Y +EA +F ML+E
Sbjct: 159 FVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQE 218
Query: 239 -DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+ F L A S G+Q+HG+++K G V SL MY K ++
Sbjct: 219 CPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
A + ERN I+W+++++GYA +G A +F +M AG++ +
Sbjct: 279 AMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHS----------AGFSPT--- 325
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+F F+ ILN + + + +GK+ HG + + + ++V +AL
Sbjct: 326 ----EFTFVG--------------ILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSAL 367
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+DMY KCG A+ F+Q+ D V W A++TG+ + G+ EEA+ +S M E PS
Sbjct: 368 VDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPS 427
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T ++L ACA +++LE GKQ+H +++ + + AL +Y+KC LE ++ VF+
Sbjct: 428 YLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFR 487
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
D+I NS+I GF + RGR+AL++F MK EGI PDHITF +L AC H G V
Sbjct: 488 RMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDR 547
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
+F +M YG+IP+L+HY C++ + R G +KE +DF+ + + + R + C
Sbjct: 548 GWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGAC 607
Query: 657 RKNGYATLGEWAARRLNELN 676
R +G +A +L EL
Sbjct: 608 RSLRDFDVGAYAGEQLMELG 627
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 228/491 (46%), Gaps = 35/491 (7%)
Query: 9 LKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNL 68
L N LS+ P S + S P S++ S+ A A L
Sbjct: 90 LLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKL 149
Query: 69 VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTL 128
+ + VF+ + Y K G + DAR +FD+MP R+ SW AM+ Y
Sbjct: 150 PSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAF 209
Query: 129 ELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
ELF L + + N+ VL + + L L + QLHGL++K G G V +E+SLV
Sbjct: 210 ELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTM 269
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K M A +F + +N+++W+ ++ Y G A MF +M P FTF
Sbjct: 270 YAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTF 329
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR-GLLDQPD 306
L A S + + G Q HG+++K+ FE V +L +MY KCG DA+ G D
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+++ WT++++G+ +G EA L++ M + V+
Sbjct: 390 VDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMP----------------------- 426
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+T+ +L CA L+ ++ GK++H I + + V AL MY KCGN
Sbjct: 427 --------SYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGN 478
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLA 485
L + + F +M RD +SWN++++G+++ G+ +A+ F EM+ E P TF +L
Sbjct: 479 LEDSMVVFRRMPD-RDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLC 537
Query: 486 ACANISSLEQG 496
AC+++ +++G
Sbjct: 538 ACSHMGLVDRG 548
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 227/491 (46%), Gaps = 50/491 (10%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCM----VMTDARRMFDDIQN--KNAVSWNVIVRR 218
LHG +K G + + +SL+ Y C ++ A +F DI ++ SWN ++
Sbjct: 36 LHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNP 93
Query: 219 YLVAGNGKEAVVMFFKMLR--EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DF 275
L A+ F M+ + + P +FA A + + S G H K+
Sbjct: 94 -LSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSS 152
Query: 276 EGDDVVLGS--LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
G + V S L MY K G + DAR + DQ RN +SW ++VSGYA EA ELF
Sbjct: 153 SGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELF 212
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
M + + N +A S + V LGL++ V
Sbjct: 213 RLMLQECPLEKNEFVATAVLSAV-------------------SVPLGLLIGV-------- 245
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
++HG + ++ + V N+L+ MY K + +A F S+ R+ ++W+A++TGY
Sbjct: 246 ---QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGS-SKERNSITWSAMITGY 301
Query: 454 ARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
A+ G+++ A T F +M P++FTF +L A +++ +L GKQ H +++ +E V
Sbjct: 302 AQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQV 361
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSL-DVIICNSMILGFCHNERGREALEVFGLMKK 571
+ ALV++Y KC C A F + + DV+I +MI G N EAL ++ M K
Sbjct: 362 YVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDK 421
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYECMIKLYCRYGYM 630
EG+ P ++T +L AC ++ Q ++C +G+ + + +Y + G +
Sbjct: 422 EGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVG--TALSTMYSKCGNL 479
Query: 631 KELEDFVNRMP 641
++ RMP
Sbjct: 480 EDSMVVFRRMP 490
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 14/255 (5%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS-WNAML 115
A+V ++ +V V++ + ++ Y KCG DA+ F ++ + D W AM+
Sbjct: 341 ALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMI 400
Query: 116 GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
+ QNG L L+ M+ GV + +T +VLR+ A L KQLH I+K GF
Sbjct: 401 TGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFG 460
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+ ++L Y KC + D+ +F + +++ +SWN I+ + G G++A+ +F +M
Sbjct: 461 LGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEM 520
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEM 288
E I P + TF N L ACS + G + +G+I K+D + ++
Sbjct: 521 KLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDH------YACIVDI 574
Query: 289 YVKCGRLEDARGLLD 303
+ G+L++A+ ++
Sbjct: 575 LSRAGQLKEAKDFIE 589
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR----SARIWFYQM-SQRRDKVSWN 447
+ G +HG+ ++ +S+ VSN+L+ Y C R +A F + + RD SWN
Sbjct: 31 RAGDALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADIPAGLRDVASWN 88
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETR---PSKFTFETLLAACANISSLEQGKQIHCFVI 504
++L +R Q A++ F M T P+ +F + A A + S G H F
Sbjct: 89 SLLNPLSRH-QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFAC 147
Query: 505 R---NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+ + NV AL+ +Y K + A RVF + + + +M+ G+ + E
Sbjct: 148 KLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEE 207
Query: 562 ALEVFGLMKKE 572
A E+F LM +E
Sbjct: 208 AFELFRLMLQE 218
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 310/633 (48%), Gaps = 39/633 (6%)
Query: 50 QLCASSKAIVEARKLESNLVTFYPTPPV-FLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ C +S ++++ + +E N+V V F N + GNL AR +FD+MP D
Sbjct: 13 RFCTTSISLLQ-KPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDI 71
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQITYANVLRSSAEELELGVSKQL 165
SW +++ Y L LF M +H+ VS + + VL++ + + + L
Sbjct: 72 VSWTSIIKRYVTANNSDEALILFSAMRVVDHA-VSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H VK +V + SSL+D Y + + + R+F ++ +NAV+W I+ + AG
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
KE + F +M R + +TFA AL AC+ L G IH +I F V SL
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY +CG ++D GL LF M ER+V+SW
Sbjct: 251 ATMYTECGEMQD--GLC-----------------------------LFENMSERDVVSWT 279
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+++ Y R +A++ MR + ++ T + + CA LS + G+++H +
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ ++ VSN+++ MY CGNL SA + F M + RD +SW+ ++ GY + G EE
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
FS M Q T+P+ F +LL+ N++ +E G+Q+H + E N R +L+ +Y+K
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C ++ A +F E+ D++ +MI G+ + + +EA+++F K G +PD +TF +
Sbjct: 459 CGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G + L +F+ M+ Y + P EHY CM+ L CR G + + E +N M +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK 578
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + C+ G G AA R+ EL+P
Sbjct: 579 DDVVWTTLLIACKAKGDIERGRRAAERILELDP 611
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 247/539 (45%), Gaps = 46/539 (8%)
Query: 37 DEPVS--YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
D VS S+ + + + C S I L + V V++ + ++ Y + G +D
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ +F EMP R+ +W A++ G L F +M+ S ++ T+A L++ A
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
++ K +H ++ RGF + + +SL Y +C M D +F+++ ++ VSW
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y G +AV F KM + P TFA+ AC+ LS G Q+H ++ +
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
V S+ +MY CG L A L R+IISW++I+ GY +G E + F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF- 399
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
SW MR++ L +L+V ++ I+
Sbjct: 400 --------SW----------------------MRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G++VH N V ++L++MY KCG+++ A + F + + R D VS A++ GYA
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE-TDRDDIVSLTAMINGYA 488
Query: 455 RRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEINV 512
G+S+EA+ F + ++ RP TF ++L AC + L+ G H F +++ Y +
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYFNMMQETYNMRP 546
Query: 513 VCR--GALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHN----ERGREALE 564
G +V++ + L A ++ E S D ++ ++++ C ERGR A E
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA-CKAKGDIERGRRAAE 604
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 210/459 (45%), Gaps = 36/459 (7%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+S+E +A + CA + + + + ++++ + + N Y +CG +
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ 261
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
D LF+ M ERD SW +++ AY + G + +E F+ M +S V N+ T+A++ + A
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L +QLH ++ G ++ + +S++ Y C + A +F ++ ++ +SW+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ Y AG G+E F M + +P +F A+ L ++ G Q+H + +
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E + V SL MY KCG +++A + + D +I+S T++++GYA G+ +EA +LF
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL-ILNVCAGLSEIK 393
+ ++ G+ +++ F+ ++ T Q+ LG N+ ++
Sbjct: 502 K----------SLKVGFR-----PDSVTFISVLTACTHS-GQLDLGFHYFNMMQETYNMR 545
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
KE +G ++D+ + G L A +MS ++D V W +L
Sbjct: 546 PAKEHYG---------------CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
+G E + +E E P T T L ANI S
Sbjct: 591 KAKGDIERGRRA-AERILELDP---TCATALVTLANIYS 625
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/622 (29%), Positives = 307/622 (49%), Gaps = 36/622 (5%)
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
+ + PV L + I+ Y KCG +A +F+ M D SW M+ ++ + G + L+L+
Sbjct: 147 FDSNPV-LGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLY 205
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M +GV+ N+ T+ +L +S+ L L K +H ++ N++L+++LVD Y KC
Sbjct: 206 HRMIQTGVAPNEFTFVKLLAASSF-LGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKC 264
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ DA ++ + W I+ + + +EA+ F +M + P NFT++ L
Sbjct: 265 QSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGIL 324
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
ACS + + G QIH ++ E D V SL +MY+KC
Sbjct: 325 NACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKC------------------- 365
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S I +A F + NVISW +++AG++ L +E++ M+
Sbjct: 366 -----------SNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVG 414
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ TL IL C + + +++HG+I +N+ +++ V NAL+D Y G + A
Sbjct: 415 VRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDA- 473
Query: 432 IWFY-QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
W M + RD +++ ++ T + G E A+ + M + + R F+ + L+A A
Sbjct: 474 -WHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAG 532
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
I +E GKQ+HC+ +++ + LV++Y KC C+ A R F E + D + N +
Sbjct: 533 IPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGL 592
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G N AL F M+ G++PD IT +L AC H G V + L +F SMR K+G
Sbjct: 593 IFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHG 652
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I PQL+HY C++ L R G ++E + + MPF P + + + C+ +G LGE A
Sbjct: 653 IRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMA 712
Query: 670 RRLNELNPWAPFQFKITTNRFD 691
R+ EL+P P + + N +D
Sbjct: 713 RQGLELDPSDPAFYVLLANLYD 734
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/554 (29%), Positives = 268/554 (48%), Gaps = 34/554 (6%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K + YSL + C +S+++ + + S ++ +FL N + YGKC +
Sbjct: 9 KIPSKIEYSLLKDIVSFC-NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVA 67
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+AR LFDEMP RD SW ++ AY + G LELF M SG N+ T + LRS +
Sbjct: 68 EARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCS 127
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E + L+ K GF N +L S+L+D Y KC +A R+F+ + N + VSW +
Sbjct: 128 ALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTM 187
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
+V ++ AG+ +A+ ++ +M++ + P FTF L A SFL Y G +H ++
Sbjct: 188 MVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNY-GKLVHAHLMMWR 246
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E + V+ +L +MY KC +EDA + E ++ WT+I+SG+ S + REA F+
Sbjct: 247 IELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFH 306
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
EM V+ N +G ILN C+ + + +
Sbjct: 307 EMETSGVVPNNFTYSG-------------------------------ILNACSSILALDL 335
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK++H + +++ V N+L+DMY KC N+ + ++ + +SW +++ G++
Sbjct: 336 GKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFS 395
Query: 455 RRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G EE++ F MQ RP+ FT T+L AC I SL Q +++H ++I+N + +VV
Sbjct: 396 EHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVV 455
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
ALV+ Y ++ A V DVI S+ AL + M K+
Sbjct: 456 VGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDD 515
Query: 574 IKPDHITFHGILLA 587
++ D + L A
Sbjct: 516 VRMDGFSLASFLSA 529
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 167/331 (50%), Gaps = 34/331 (10%)
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S +G+ IH IIK+ F+ D + +L +Y KC
Sbjct: 30 SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKC-------------------------- 63
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+ ++ EAR+LF+EMP R+V SW +++ Y + +EAL+ M + + ++ T
Sbjct: 64 -FGVA----EARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFT 118
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L L C+ L E G + ++ + SN + +AL+D Y KCG + A F M+
Sbjct: 119 LSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMN 178
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
D VSW +++ + G +A+ + M Q P++FTF LLAA + + L GK
Sbjct: 179 NG-DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGK 236
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+H ++ E+N+V + ALV++Y KC +E A++V K + DV + ++I GF +
Sbjct: 237 LVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSL 296
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ REA+ F M+ G+ P++ T+ GIL AC
Sbjct: 297 KFREAITAFHEMETSGVVPNNFTYSGILNAC 327
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 193/449 (42%), Gaps = 46/449 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL-DDARGLFDEM 103
Y+ + C+S A+ +++ S +V V + N ++ Y KC N+ +DA F +
Sbjct: 320 YSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGI 379
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+ SW +++ ++++G ++++F M GV N T + +L + L ++
Sbjct: 380 ASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTR 439
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+LHG I+K +V++ ++LVDAY ++ DA + +++++ +++ + R G
Sbjct: 440 KLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTG 499
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
N + A+ + M ++D+R F+ A+ L A + + G Q+H +K V
Sbjct: 500 NHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSN 559
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L ++Y KCG + DA + E + +SW ++ G A +G + A F +M
Sbjct: 560 GLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDM------- 612
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG-------K 396
LAG + DQ+T L+L C+ + MG +
Sbjct: 613 ---RLAGV---------------------EPDQITCLLVLYACSHGGLVDMGLDYFQSMR 648
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E HG + D+ +V L+D+ + G L A M + D + + +L
Sbjct: 649 EKHGIRPQLDH----YV--CLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLH 702
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLA 485
G + E PS F LLA
Sbjct: 703 GNIPLG-EHMARQGLELDPSDPAFYVLLA 730
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 15/296 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++L + + C + K++ + RKL ++ V + N ++ Y G +DDA
Sbjct: 417 PNSFTL-STILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWH 475
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+ M RD ++ ++ Q G L + MN V + + A+ L ++A
Sbjct: 476 VTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPI 535
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ KQLH VK G + + + LVD YGKC + DA R F +I +AVSWN ++
Sbjct: 536 METGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFG 595
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVII 271
G+ A+ F M + P T L+ACS G+ + HG+
Sbjct: 596 LASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRP 655
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRI 326
++D L ++ + GRLE+A +++ P + + + + +++ + G I
Sbjct: 656 QLDH------YVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNI 705
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 469 MQWETR----PSKFTFETL--LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
M W T PSK + L + + N S+ G IH +I+ ++ ++ L+ +Y
Sbjct: 1 MIWRTTVSKIPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLY 60
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC + A ++F E DV ++ + EALE+F M G P+ T
Sbjct: 61 GKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLS 120
Query: 583 GILLAC 588
L +C
Sbjct: 121 TALRSC 126
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 281/498 (56%), Gaps = 6/498 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ + D V SL MYV+ GRLEDA + D+ R+++S+T++
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GYA G I A++LF+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I + + SN+ + NAL+D+Y KCG L +A F +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLE 494
+ +D +SWN ++ GY +EA+ F EM ET P+ T ++L ACA++ +++
Sbjct: 327 LPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAID 384
Query: 495 QGKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G+ IH ++ + + R +L+++Y KC +E A +VF + N+MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F + R + ++F M+K GI+PD ITF G+L AC H G + L F +M Y + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY CMI L G KE E+ +N M P + + C+ +G LGE A L
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 564
Query: 673 NELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 565 IKIEPENPGSYVLLSNIY 582
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 68/439 (15%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F + E + WN M + + P L+L++ M G+ N T+ VL+S A+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 156 ELELGVSKQLHGLIVKRGFCG--------------------------------NVILESS 183
+Q+HG ++K G C +V+ ++
Sbjct: 147 SKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L+ Y + +A+++FD+I K+ VSWN ++ Y GN KEA+ +F M++ ++RP
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
T + AC+ S G Q+H I F + ++ +L ++Y KCG LE A GL +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ +++ISW +++ GY +EA LF E
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQE---------------------------- 357
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMY 421
M ++ + + VT+ IL CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 358 ---MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
KCG++ +A F + + SWNA++ G+A G+++ + FS M + +P TF
Sbjct: 415 AKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 481 ETLLAACANISSLEQGKQI 499
LL+AC++ L+ G+ I
Sbjct: 474 VGLLSACSHSGMLDLGRHI 492
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 36/332 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLE---------------SNLVTFY----------- 72
P SY+ + + + CA SKA E +++ ++L++ Y
Sbjct: 132 PNSYT-FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 190
Query: 73 -----PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
P V I+ Y G +++A+ LFDE+P +D SWNAM+ Y + G
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF DM + V ++ T V+ + A+ + + +Q+H I GF N+ + ++L+D
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F+ + K+ +SWN ++ Y KEA+++F +MLR P + T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G + SL +MY KCG +E A + +
Sbjct: 371 LSILPACAHLGAIDIGRWIH-VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEM 336
+++ SW +++ G+A+ GR + +LF+ M
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y KCG+++ A +F+ + + SWNAM+ + +G + +LF M G+ +
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 144 ITYANVLRSSAEE--LELG 160
IT+ +L + + L+LG
Sbjct: 471 ITFVGLLSACSHSGMLDLG 489
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
L YAI VFK +++I N+M G + AL+++ M G+ P+ TF +L +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C K Q + K G L + +I +Y + G +++ ++ P V
Sbjct: 144 CAKSKAFKEGQQIHGHV-LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 648 MLRKIFDKCRKNGYATLG--EWAARRLNEL 675
I GYA+ G E A + +E+
Sbjct: 203 YTALI------KGYASRGYIENAQKLFDEI 226
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/663 (30%), Positives = 322/663 (48%), Gaps = 45/663 (6%)
Query: 22 PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVF--- 78
PS+ L+K S HL + + + Y L Q C S K+I +++ ++ +T +
Sbjct: 4 PSQALSK--SKHLLT----ATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHH 57
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
LL+ Y CG AR LFDE+ SWNAM+ YT +G L LF+ M SG
Sbjct: 58 LLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASG 117
Query: 139 VS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ TY V+++ + L + +H V GF + +++SL+ Y C M A
Sbjct: 118 RRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVA 177
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+FD ++ + VSWN ++ Y G KEA+++F M+ + I P T + L CS+L
Sbjct: 178 RRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYL 237
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G ++H ++ + D V SL +MY KC
Sbjct: 238 KELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC------------------------- 272
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G + EA+ +F EM +R+V+SW M+ GY + + AL +M+ + + V
Sbjct: 273 ------GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFV 326
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL +L+ CA L +K G+ +HG+ R S + V AL+DMY KC N+ + F +
Sbjct: 327 TLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKX 386
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
S++R WNA+++G G S +A+ F +M E P+ T +LL A A ++ L+Q
Sbjct: 387 SKQR-TAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQA 445
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK--ESSSLDVIICNSMILGFC 554
+ +H ++IR+ + + L+++Y+KC LE A +F D+I +++I G+
Sbjct: 446 RNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYG 505
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G A+ +F M + G+KP+ ITF IL AC H G V L F M + +
Sbjct: 506 MHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRT 565
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+HY C+I L R G ++E + + M F P + + C + LGE AA+ L E
Sbjct: 566 DHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFE 625
Query: 675 LNP 677
L P
Sbjct: 626 LEP 628
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 301/590 (51%), Gaps = 38/590 (6%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P D S N+ + T L+L + G + ++ S A+ + V
Sbjct: 40 PGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGI 99
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
QLH I+K GF NV + S+LVD YGKC ++ A+R+FD++ ++N V+WN ++ YL G
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVG 159
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ A+ +F +M++ I P F+ + L C + G+Q+HG+ +K F
Sbjct: 160 CPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGF-------- 211
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
C NI+ T ++ Y+ I +R +F+ MPERN+I+
Sbjct: 212 --------C---------------YNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIIT 248
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W +M+AGY A+ V M++ ++ VT +L+ + +++ K+VH I
Sbjct: 249 WTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRII 308
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ---RRDKVSWNAVLTGYARRGQSE 460
R SN ++ L+ +Y +C + S+ F ++ R D++SWNAV+ G + G E
Sbjct: 309 REGLESNSYLEVTLVTVYSECSS--SSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGE 366
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
A+ FS+M Q FTF ++L A IS+L++GKQIH V++ Y N+ + LV
Sbjct: 367 AALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLV 426
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y +C + A RVF DVI NS++ G ++ GREA+E+F M++ G+KPD+
Sbjct: 427 SMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNT 486
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGI-IPQLEHYECMIKLYCRYGYMKELEDFVN 638
TF +L AC H G + L++FD MR Y + P EHY M+ L+ R GY+ E EDF+N
Sbjct: 487 TFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFIN 546
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
MP P + + + C+ +G + A++L ++ P P + + +N
Sbjct: 547 TMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSN 596
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 228/466 (48%), Gaps = 44/466 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA S ++ +L S ++ V++ + ++ YGKCG + A+ LFDEMP R+ +W
Sbjct: 89 CAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTW 148
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS--AEELELGVSKQLHGLI 169
N+++ Y G P +ELFL+M G+ + + VL E+ +LG+ Q+HGL
Sbjct: 149 NSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGI--QVHGLS 206
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K GFC N+++ + L+D Y K + +R MFD + +N ++W +V Y A+
Sbjct: 207 MKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAM 266
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSP--YEGMQIHGVIIKIDFEGDDVVLGSLTE 287
V+ M R IR LN+ N L + SF SS Q+H II+ E + + +L
Sbjct: 267 VLVRDMQRLGIR-LNYVTYNCLLS-SFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVT 324
Query: 288 MYVKC--GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y +C LED + + ISW +++ G + G A + F++
Sbjct: 325 VYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSK---------- 374
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
MR+ D+D T +L +S + GK++H + +
Sbjct: 375 ---------------------MRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKA 413
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y SN+ V N L+ MY +CG++ A+ F M R D +SWN++L+G A G EA+
Sbjct: 414 GYGSNLNVQNGLVSMYARCGSINDAKRVFSLM-DRHDVISWNSLLSGCAYHGYGREAVEL 472
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
F +M+ +P TF +L+AC ++ L++G + + ++RN Y +
Sbjct: 473 FEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLE-YFDLMRNDYSL 517
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 176/385 (45%), Gaps = 37/385 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y K N+D +R +FD MPER+ +W +M+ Y P + L DM G+ N
Sbjct: 222 IDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNY 281
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC--MVMTDARRMF 201
+TY +L S + +L KQ+H I++ G N LE +LV Y +C + D ++
Sbjct: 282 VTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVC 341
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ + +SWN ++ GNG+ A+ F KM + I FTF + L A +S+
Sbjct: 342 SGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLD 401
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
EG QIH +++K + + V L MY +CG + DA+ + D ++ISW S++SG A
Sbjct: 402 EGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCA 461
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
G REA ELF + MR++ D T +
Sbjct: 462 YHGYGREAVELFEQ-------------------------------MRRSGVKPDNTTFLV 490
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS---NALLDMYRKCGNLRSARIWFYQMS 438
+L+ C + + G E + RNDYS + ++++D++ + G L A + M
Sbjct: 491 VLSACRHVGLLDKGLEYFDLM-RNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMP 549
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAM 463
+ A+L+ G E A+
Sbjct: 550 IEPGPSVYKALLSACQVHGNVEIAV 574
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 156/344 (45%), Gaps = 27/344 (7%)
Query: 25 TLTKTISGHLKSDEPVS----------------YSLYAHLFQLCASSKAIVEARKLESNL 68
T T ++G+ +PV+ Y Y L +SS + +++ +
Sbjct: 248 TWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRI 307
Query: 69 VTFYPTPPVFLLNRAIECYGKCGN--LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
+ +L + Y +C + L+D + + D SWNA++G + G
Sbjct: 308 IREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEA 367
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L+ F M +G+ + T+ +VLR+ L KQ+H L++K G+ N+ +++ LV
Sbjct: 368 ALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVS 427
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y +C + DA+R+F + + +SWN ++ G G+EAV +F +M R ++P N T
Sbjct: 428 MYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTT 487
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL---GSLTEMYVKCGRLEDARGLLD 303
F L AC + +G++ +++ D+ + S+ +++ + G L +A ++
Sbjct: 488 FLVVLSACRHVGLLDKGLEYFD-LMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFIN 546
Query: 304 -QPDERNIISWTSIVSGYAISGR----IREARELFNEMPERNVI 342
P E + +++S + G +R A++L P VI
Sbjct: 547 TMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVI 590
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 210/786 (26%), Positives = 354/786 (45%), Gaps = 143/786 (18%)
Query: 42 YSLYAH--LFQLCASSKAIVEARKLESNLVTF--------------YPTPPVFLLNRAIE 85
YSLY+H L L + SK + L F P +F N I+
Sbjct: 120 YSLYSHDSLKHLTSQSKLNTRHARWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQ 179
Query: 86 CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQIT 145
G+ G +++AR +F+EM +RD SWN+M+ Y+QNG LF + V N T
Sbjct: 180 ELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----DAFVGKNIRT 235
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCG---------------------------NV 178
+ +L A+E + ++++ + +R NV
Sbjct: 236 WTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNV 295
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+S+V Y C M++AR +FD + +N+VSW V++ Y+ + EA +F KM R
Sbjct: 296 ASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRT 355
Query: 239 DIRPLNFTFANALFACSFLS--------------SPYEGMQIHGVII--------KIDF- 275
RP F L A + L + YEG + G I +D
Sbjct: 356 VARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLA 415
Query: 276 --------EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER------------------- 308
E ++ ++ + +CGRL+DA L ++ E+
Sbjct: 416 MHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQ 475
Query: 309 ------------NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
N+++W +I++GY +G ++EA++LF +MP +N SW AM+AG+ ++
Sbjct: 476 KARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEE 535
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+EAL+ + + ++ + L+ CA + ++++G+ +H + N +V N
Sbjct: 536 SREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNG 595
Query: 417 LLDMYRKCGN-------------------------------LRSARIWFYQMSQRRDKVS 445
L+ MY KCGN L AR+ F +M +RD VS
Sbjct: 596 LISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMP-KRDVVS 654
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W A+++ Y + G E A+ F +M +P++ T +LL+AC N+ +++ G+Q H +
Sbjct: 655 WTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIF 714
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ + +L+ +Y KC E VF+E D+I N++++G N G+EA++
Sbjct: 715 KLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIK 773
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+F M+ EGI PD ++F G+L AC H G V F+SM KYGI+P + HY CM+ L
Sbjct: 774 IFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLL 833
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFK 684
R GY+ E E + MP P + + CR + LG+ A RL ++ +
Sbjct: 834 GRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYV 893
Query: 685 ITTNRF 690
+ +N F
Sbjct: 894 LLSNLF 899
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/629 (28%), Positives = 317/629 (50%), Gaps = 38/629 (6%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
+ + +V R + ++ + + N + Y KCG L A +F+ + +D SWN
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 113 AMLGAYTQNGFPGRT---LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+++ Y+QNG + ++LF +M + N T A + ++ + V +Q H L+
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK G++ +++SLV Y K ++ D ++F + +N +W+ +V Y G +EA+
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTE 287
+F LRE + + S ++ Y G+ QIH + IK G + +L
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KC L EA ++F+ +RN I+W+AM
Sbjct: 265 MYSKCESL-------------------------------NEACKMFDSSGDRNSITWSAM 293
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ GY+++ EA+ M + T+ +LN C+ + ++ GK++H F+ + +
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++F + AL+DMY K G L AR F + Q RD W ++++GY + +EEA+ +
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ P+ T ++L AC+++++LE GKQ+H I++ + + V AL +Y+KC
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCG 472
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
LE VF+ + + DV+ N+MI G HN +G EALE+F M EG++PD +TF I+
Sbjct: 473 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H+G V+ +F+ M + G+ P+++HY CM+ L R G +KE ++F+ + +
Sbjct: 533 ACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGL 592
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ R + C+ +G LG +A +L L
Sbjct: 593 CLWRILLSACKNHGKCELGVYAGEKLMAL 621
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 230/462 (49%), Gaps = 38/462 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y+L A +F+ +S ++ R+ + +V +++ + Y K G ++D
Sbjct: 116 PNAYTL-AGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLE---LFLDMNHSGVSANQITYANVLRSSAE 155
+F MPER+ +W+ M+ Y G ++ LFL G ++ + + VL S A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ +G+ +Q+H + +K G G V L ++LV Y KC + +A +MFD ++N+++W+ +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V Y G EAV +F +M I+P +T L ACS + EG Q+H ++K+ F
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E +L +MY K G L DAR D ER++ WTS++SGY + EA L+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M +I + T+ +L C+ L+ +++G
Sbjct: 414 MKTAGIIP-------------------------------NDPTMASVLKACSSLATLELG 442
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K+VHG ++ + + + +AL MY KCG+L + F + + +D VSWNA+++G +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF-RRTPNKDVVSWNAMISGLSH 501
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
GQ +EA+ F EM E P TF +++AC++ +E+G
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 244/515 (47%), Gaps = 36/515 (6%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L +++ L + +HG I++ G + + LV+ Y KC + A +F+ I K+
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80
Query: 210 VSWNVIVRRYLVAG--NGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQI 266
VSWN ++ Y G + V+ F+ +R +DI P +T A A S L S G Q
Sbjct: 81 VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA 140
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H +++K+ GD V SL MY K G +ED + ERN +W+++VSGYA GR+
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA ++FN +FL K +L+
Sbjct: 201 EEAIKVFN-----------------------------LFLREKEEGSDSDYVFTAVLSSL 231
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A + +G+++H +N + +SNAL+ MY KC +L A F S R+ ++W
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF-DSSGDRNSITW 290
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+A++TGY++ G+S EA+ FS M +PS++T +L AC++I LE+GKQ+H F+++
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+E ++ ALV++Y K CL A + F DV + S+I G+ N EAL +
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
+ MK GI P+ T +L AC ++L Q K+G ++ + +Y
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
+ G +++ R P N V + NG
Sbjct: 470 KCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNG 503
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 11/294 (3%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y++ + C+ + E ++L S L+ +F ++ Y K G L DAR
Sbjct: 319 KPSEYTIVG-VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAE 155
FD + ERD W +++ Y QN L L+ M +G+ N T A+VL+ SS
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LELG KQ+HG +K GF V + S+L Y KC + D +F NK+ VSWN +
Sbjct: 438 TLELG--KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS---FLSSPYEGMQIHGVIIK 272
+ G G EA+ +F +ML E + P + TF N + ACS F+ + + I
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGR 325
+D + D + ++ + G+L++A+ ++ + + + W ++S G+
Sbjct: 556 LDPKVDH--YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 22/208 (10%)
Query: 467 SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
S Q E P T L + +L G+ +H +IR + LV Y KC
Sbjct: 4 STFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCG 63
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHN---ERGREALEVFGLMKKEGIKPDHITFHG 583
L A +F DV+ NS+I G+ N +++F M+ + I P+ T G
Sbjct: 64 KLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAG 123
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY------ECMIKLYCRYGYMKELEDFV 637
I A + +LQ R + ++ ++ + ++ +YC+ G +++
Sbjct: 124 IFKA-------ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF 176
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLG 665
MP T + +GYAT G
Sbjct: 177 AYMPERNTYTWSTMV------SGYATRG 198
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 293/585 (50%), Gaps = 32/585 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
VF+ N + YG G +D+A+ +FDE ER+ SWN M+ AY +N + +F +M
Sbjct: 135 VFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMV 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
SG N+ ++ V+ + + +Q+HG++V+ G+ +V ++LVD Y K +
Sbjct: 195 WSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIE 254
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F+ I + VSWN ++ + G+ A+ + +M + P FT ++ L AC+
Sbjct: 255 MAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACA 314
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G QIHG +IK D + D+ V L +MY K G L+DAR + D R++I W +
Sbjct: 315 GAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNA 374
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++SG + GR E LF+ M KE LD D++
Sbjct: 375 LISGCSHDGRHGEVLSLFHRMR--------------------KEGLDL---------DVN 405
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ TL +L A L I K+VH + S+ V N L+D Y KCG L A I +
Sbjct: 406 RTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYA-IKVF 464
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ S D +S +++T ++ E+A+ F +M + P F +LL ACA++S+ E
Sbjct: 465 EESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYE 524
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGKQ+H +I+ + +V ALV Y KC +E A F V+ ++MI G
Sbjct: 525 QGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLA 584
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G+ ALE+F M EG+ P++IT +L AC H G V A ++F+SM+ +GI
Sbjct: 585 QHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTE 644
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
EHY CMI + R G +K+ + VN MPF + + R N
Sbjct: 645 EHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALLGASRLN 689
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/538 (28%), Positives = 261/538 (48%), Gaps = 46/538 (8%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+ A + + L+S L+ Y N + Y +C AR +FDE+P+ SW+++
Sbjct: 22 AGAHLHSHLLKSGLLASYS-------NHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSL 74
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ AY+ NG P L F M GV N+ VL+ A ++ G Q+H L V
Sbjct: 75 VTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CAPDVRFGA--QVHALAVATRL 131
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+V + ++LV YG ++ +A+R+FD+ +NAVSWN ++ Y+ ++AV +F
Sbjct: 132 IQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFR 191
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M+ RP F F+ + AC+ G Q+HG++++ ++ D +L +MY K G
Sbjct: 192 EMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLG 251
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+E A + ++ +++SW ++++G G A EL +M V+
Sbjct: 252 DIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVP---------- 301
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+ TL +L CAG +G+++HGF+ + D S+ FV
Sbjct: 302 ---------------------NVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFV 340
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
+ L+DMY K G L AR F M RRD + WNA+++G + G+ E ++ F M+ E
Sbjct: 341 AVGLVDMYAKDGFLDDARKVFDFM-PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEG 399
Query: 474 RPSKFTFETLLAACANISSLE---QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
TL A + +SLE KQ+H + + L++ Y KC L+Y
Sbjct: 400 LDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDY 459
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
AI+VF+ES S D+I SM+ + G +A+++F M ++G++PD +L AC
Sbjct: 460 AIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 517
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 214/450 (47%), Gaps = 35/450 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S+ R++ +V VF N ++ Y K G+++ A +F+++P D SW
Sbjct: 212 CTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSW 271
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA++ +G R LEL L M GV N T ++VL++ A + +Q+HG ++K
Sbjct: 272 NALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIK 331
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+ + LVD Y K + DAR++FD + ++ + WN ++ G E + +
Sbjct: 332 ADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSL 391
Query: 232 FFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F +M +E D+ T A L + + L + Q+H + KI D V+ L + Y
Sbjct: 392 FHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSY 451
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCGRL+ A + ++ +IIS TS+++ + +A +LF +M + +
Sbjct: 452 WKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGL-------- 503
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ D L +LN CA LS + GK+VH + + ++S
Sbjct: 504 -----------------------EPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTS 540
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++F NAL+ Y KCG++ A + F + + + VSW+A++ G A+ G + A+ F M
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADMAFSGLPE-KGVVSWSAMIGGLAQHGHGKRALELFHRM 599
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQ 498
E P+ T ++L+AC + ++ K+
Sbjct: 600 LDEGVAPNNITLTSVLSACNHAGLVDDAKK 629
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 157/303 (51%), Gaps = 2/303 (0%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + A R++ ++ F+ ++ Y K G LDDAR +FD MP RD
Sbjct: 309 VLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRD 368
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQL 165
WNA++ + +G G L LF M G + N+ T A VL+S+A + +KQ+
Sbjct: 369 LILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQV 428
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L K G + + + L+D+Y KC + A ++F++ + + +S ++ +G
Sbjct: 429 HALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHG 488
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A+ +F +MLR+ + P +F ++ L AC+ LS+ +G Q+H +IK F D +L
Sbjct: 489 EDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNAL 548
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
Y KCG +EDA E+ ++SW++++ G A G + A ELF+ M + V N
Sbjct: 549 VYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNN 608
Query: 346 AML 348
L
Sbjct: 609 ITL 611
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 14/337 (4%)
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR +F+E+P+ +SW++++ Y+ + + ++AL MR ++ L ++L CA
Sbjct: 56 ARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CA- 113
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+++ G +VH ++FV+NAL+ MY G + A+ F + R+ VSWN
Sbjct: 114 -PDVRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNG 172
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++ Y + + +A+ F EM W RP++F F ++ AC E G+Q+H V+R
Sbjct: 173 MISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTG 232
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
Y+ +V ALV++Y+K +E A VF++ + DV+ N++I G + ALE+
Sbjct: 233 YDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLL 292
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----CMIKL 623
MK G+ P+ T +L AC G L Q M I + E ++ +
Sbjct: 293 QMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFM-----IKADADSDEFVAVGLVDM 347
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
Y + G++ + + MP + + + C +G
Sbjct: 348 YAKDGFLDDARKVFDFMPRRDLI-LWNALISGCSHDG 383
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP S+ L + L CAS A + +++ ++L+ T VF N + Y KCG+++
Sbjct: 501 KGLEPDSFVL-SSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIE 559
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA F +PE+ SW+AM+G Q+G R LELF M GV+ N IT +VL S+
Sbjct: 560 DADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVL-SAC 618
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILE--SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVS 211
L + + +K F + E + ++D G+ + DA + +++ NA
Sbjct: 619 NHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAV 678
Query: 212 WNVIV 216
W ++
Sbjct: 679 WGALL 683
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 298/565 (52%), Gaps = 41/565 (7%)
Query: 131 FLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
L+ HS +SA YA++L++ + Q H +VK G + + +SL+ Y
Sbjct: 47 ILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYF 106
Query: 190 KCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
K M + RR+FD + K+A+SW ++ Y+ + +A+ +F +M+ ++P FT +
Sbjct: 107 KLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLS 166
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+A+ AC L G HGV+I FE + V+ +L MY G+ +P
Sbjct: 167 SAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMY----------GVNKEP--- 213
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+AR +F+EMPE +VI W A+L+ ++++ L++EAL + M
Sbjct: 214 ------------------VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 255
Query: 369 KTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ + D T G +L C L +K GKE+HG + N SN+ V ++LLDMY K G++
Sbjct: 256 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSV 315
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
R AR F M R++ VSW+A+L GY + G+ E+A+ F EM+ + F T+L AC
Sbjct: 316 REARQVFNGMP-RKNIVSWSALLGGYCQNGEHEKAIEMFREME---EKDLYCFGTVLKAC 371
Query: 488 ANISSLEQGKQIHC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
A ++++ GK+IH +V R C+ NV+ AL+++Y K C++YA RV+ + S ++I
Sbjct: 372 AGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITW 430
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
N+M+ N RG EA+ F M K+GIKPD+I+F +L AC H G V+ +F M
Sbjct: 431 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAK 490
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA-TLG 665
YGI P EHY CMI L R G +E E+ ++R + + C N A ++
Sbjct: 491 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPCAANTDASSIA 550
Query: 666 EWAARRLNELNPWAPFQFKITTNRF 690
E A+R+ EL P + + +N +
Sbjct: 551 ERIAKRMMELEPKYHMSYVLLSNMY 575
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 230/458 (50%), Gaps = 39/458 (8%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG-NLDDARGLFD 101
+LYA L Q C + + + +++V + N + Y K G ++ + R +FD
Sbjct: 61 NLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFD 120
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
M +D SW +M+ Y + + LE+F++M G+ N+ T ++ +++ E E+ +
Sbjct: 121 GMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRL 180
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+ HG+++ GF N ++ S+L YG DARR+FD++ + + W ++ +
Sbjct: 181 GRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSK 240
Query: 222 AGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+EA+ +F+ M R + + P TF L AC L +G +IHG +I + V
Sbjct: 241 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 300
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V SL +MY K G + +AR + + +NI+SW++++ GY +G +A E+F EM E+
Sbjct: 301 VESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEK- 359
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
D G +L CAGL+ +++GKE+HG
Sbjct: 360 ----------------------------------DLYCFGTVLKACAGLAAVRLGKEIHG 385
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
R N+ V +AL+D+Y K G + A + +MS R+ ++WNA+L+ A+ G+ E
Sbjct: 386 QYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSV-RNMITWNAMLSALAQNGRGE 444
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
EA++ F++M + +P +F +L AC + +E+G+
Sbjct: 445 EAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGR 482
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S + + C + + + + +++ L+T V + + ++ YGK G++ +AR +F+
Sbjct: 265 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNG 324
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP ++ SW+A+LG Y QNG + +E+F +M + + VL++ A + +
Sbjct: 325 MPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEK----DLYCFGTVLKACAGLAAVRLG 380
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++HG V+RG GNVI+ES+L+D YGK + A R++ + +N ++WN ++
Sbjct: 381 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQN 440
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVV 281
G G+EAV F M+++ I+P +F L AC EG ++ K +
Sbjct: 441 GRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEH 500
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+ ++ + G E+A LLD+ + RN S ++ G
Sbjct: 501 YSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLG 538
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/645 (28%), Positives = 323/645 (50%), Gaps = 37/645 (5%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F L K + RK+ + LV + + + + YG G+++ AR +FD + D
Sbjct: 43 FSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDL 102
Query: 109 GSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW M+ Y N ++ + + + + ++ VL++ +E E ++LH
Sbjct: 103 YSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHC 162
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
IVK G + +L + LVD Y KC + D+RR+FD+I ++N V W ++ Y+ KE
Sbjct: 163 QIVKVGSPDSFVL-TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKE 221
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+V+F +M + +T + + AC+ L + ++G +HG +IK F+ + ++ L +
Sbjct: 222 GLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLD 281
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
+Y KCG + DA + D+ +++SWT+++ GYA G REA +LF + ER
Sbjct: 282 LYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTD--ER-------- 331
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
WK+ L + VT +L+ CA + MG+ VH +
Sbjct: 332 ---------WKDLLP------------NTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGS 370
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
F NAL+DMY KC + AR + ++ +D ++WN++++GY + G + EA+ F
Sbjct: 371 EDATF-ENALVDMYAKCHMIGDAR-YVFETVFDKDVIAWNSIISGYTQNGYAYEALELFD 428
Query: 468 EMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKC 525
+M+ ++ P T ++L+ACA++ + G +H + I+ V G AL+ Y KC
Sbjct: 429 QMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKC 488
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
E A +F E + I ++MI G+ +LE+FG M KE ++P+ + F IL
Sbjct: 489 GDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTIL 548
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G + ++F++M Y +P ++HY CM+ L R G ++E DF+ ++P P
Sbjct: 549 SACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPD 608
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V +L CR + LGE A RR+ EL+P + + +N +
Sbjct: 609 VSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLY 653
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 231/455 (50%), Gaps = 36/455 (7%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+++ + + C+ + E RKL +V +P F+L ++ Y KC ++D+R +FDE+
Sbjct: 140 VFSIVLKACSELRETDEGRKLHCQIVKV-GSPDSFVLTGLVDMYAKCREVEDSRRVFDEI 198
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+R+ W +M+ Y QN L LF M V NQ T +++ + + L K
Sbjct: 199 LDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGK 258
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+HG ++K GF N L + L+D Y KC + DA +FD++ + VSW ++ Y G
Sbjct: 259 WVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRG 318
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA+ +F +D+ P T ++ L AC+ S G +H + IK+ E D
Sbjct: 319 YPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFEN 377
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KC + DAR + + ++++I+W SI+SGY +G EA ELF++M +V
Sbjct: 378 ALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYP 437
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF-I 402
D +TL +L+ CA + ++G +HG+ I
Sbjct: 438 -------------------------------DAITLVSVLSACASVGAYRVGSSLHGYAI 466
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
S +++V ALL+ Y KCG+ SAR+ F +M + ++ ++W+A++ GY +G +
Sbjct: 467 KAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGE-KNTITWSAMIGGYGIQGDCSRS 525
Query: 463 MTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
+ F +M E P++ F T+L+AC++ L +G
Sbjct: 526 LELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEG 560
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/618 (29%), Positives = 320/618 (51%), Gaps = 37/618 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-N 135
VF+ N + YGKCG +D+A +FD MPE + SWN+M+ A+++NGF + +L ++M
Sbjct: 181 VFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLG 240
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
G+ + +T +L A E E+ + +HGL VK G V++ +++V Y KC +
Sbjct: 241 EEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLN 300
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML--REDIRPLNFTFANALFA 253
+A+ F NKN VSWN ++ + + G+ EA + +M E+++ T N L A
Sbjct: 301 EAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPA 360
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C D + L SL E++ G + +++
Sbjct: 361 CL----------------------DKLQLRSLKELH----------GYSFRHCFQHVELS 388
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+ + YA G + A ++F+ + ++ V SWNA++ G+ ++ ++AL +F M + +
Sbjct: 389 NAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQ 448
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D T+ +L CA L ++ GKE+HG++ RN ++ FV +LL Y CG SAR+
Sbjct: 449 PDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVL 508
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F +M + ++ VSWNA+++GY++ G E++ F + E + + ++ AC+ +S+
Sbjct: 509 FDRM-KDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSA 567
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GK+ H +V++ + +++++Y K C++ + +VF +V N++I+
Sbjct: 568 LRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVA 627
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ G+EA+E++ MKK G PD T+ GIL+AC H G V+ L++F M+ I P
Sbjct: 628 HGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEP 687
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY C+I + R G + + VN MP + + CR G +GE A++L
Sbjct: 688 KLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKL 747
Query: 673 NELNPWAPFQFKITTNRF 690
EL P + + +N +
Sbjct: 748 LELEPDKAENYVLLSNLY 765
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 275/545 (50%), Gaps = 35/545 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN-RAIECYGKCGNLDDARGLFDEMPER 106
L Q C + K I R+L + ++LN R I+ Y CG+ D+R +FD M +
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WNA++ YT+NG G +++F+D+ + + + T+ +V+++ L++ + + +
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG+++K G +V + ++LV YGKC + +A ++FD + N VSWN ++ + G
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 226 KEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+++ + +ML E+ + P T L C+ GM IHG+ +K+ + +V +
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+ MY KCG L +A+ + + +N++SW +++S +++ G + EA L EM I
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQ----IQG 344
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M A ++VT+ +L C +++ KE+HG+ R
Sbjct: 345 EEMKA-------------------------NEVTILNVLPACLDKLQLRSLKELHGYSFR 379
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + ++ +SNA + Y KCG L SA F+ + + SWNA++ G+A+ G +A+
Sbjct: 380 HCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVS-SWNALIGGHAQNGDPRKALH 437
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
+M + +P FT +LL ACA++ SL+ GK+IH +V+RN E + +L+ Y
Sbjct: 438 LLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYI 497
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
C A +F +++ N+MI G+ N E+L +F EGI+ I
Sbjct: 498 HCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVS 557
Query: 584 ILLAC 588
+ AC
Sbjct: 558 VFGAC 562
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 218/448 (48%), Gaps = 39/448 (8%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L++ + ++ ++LH + + + +L + L+ Y C D+R +FD+++ K
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI 266
N + WN +V Y G + V +F ++ + D +P NFTF + + AC + G I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG++IK+ D V +L MY KCG ++
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVD------------------------------ 198
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNV 385
EA ++F+ MPE N++SWN+M+ ++ + +++ D + M + D VT+ IL V
Sbjct: 199 -EAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPV 257
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CAG E+ +G +HG + S + V+NA++ MY KCG L A++ F + + ++ VS
Sbjct: 258 CAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVK-NNNKNVVS 316
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQW---ETRPSKFTFETLLAACANISSLEQGKQIHCF 502
WN +++ ++ G EA EMQ E + ++ T +L AC + L K++H +
Sbjct: 317 WNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGY 376
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
R+C++ +V A + Y KC L A +VF V N++I G N R+A
Sbjct: 377 SFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKA 435
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIH 590
L + M G +PD T +LLAC H
Sbjct: 436 LHLLFQMTYSGQQPDWFTISSLLLACAH 463
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 186/389 (47%), Gaps = 23/389 (5%)
Query: 22 PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN 81
P K L +P +++ + L CA K++ +++ ++ F+
Sbjct: 432 PRKALHLLFQMTYSGQQPDWFTI-SSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGT 490
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
+ Y CG AR LFD M +++ SWNAM+ Y+QNG P +L LF G+ +
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
++I +V + ++ L + K+ HG ++K + + S++D Y K + ++R++F
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVF 610
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D +++KN SWN I+ + + G+GKEA+ ++ +M + P FT+ L AC
Sbjct: 611 DGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVE 670
Query: 262 EGMQIHGVIIKIDF-EGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
EG++ + + E L +M + GRL+DA L+++ P+E + W+S++
Sbjct: 671 EGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRS 730
Query: 320 YAISGRI----REARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
G + + A++L P++ N + + + AG + W D V +R+ K+
Sbjct: 731 CRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGK---W----DGVRRVRQMMKE 783
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
I L AG S I++G V+ F+
Sbjct: 784 IG-------LQKDAGCSWIEVGGRVYSFV 805
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 138/261 (52%), Gaps = 6/261 (2%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA-LLDMYRKCGNLRSARIWFYQ 436
+GL+L C +I+ G+ +H F+ + + N +V N L+ MY CG+ +R+ F
Sbjct: 45 AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDN 104
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLE 494
M + ++ + WNA+++GY R G + + F ++ +T +P FTF +++ AC I +
Sbjct: 105 M-ETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVR 163
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+ IH VI+ ++V ALV +Y KC ++ A++VF +++ NSMI F
Sbjct: 164 LGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFS 223
Query: 555 HNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N R++ ++ ++ +EG+ PD +T IL C EG V + + + K G+ +
Sbjct: 224 ENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIH-GLAVKLGLSEE 282
Query: 614 LEHYECMIKLYCRYGYMKELE 634
+ M+ +Y + GY+ E +
Sbjct: 283 VMVNNAMVYMYSKCGYLNEAQ 303
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/616 (29%), Positives = 314/616 (50%), Gaps = 34/616 (5%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
LN I Y KCG + A +F M RD SW+AM+ + N R L F+DM +G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCM-VMTD 196
N+ +A R+ + + V + G ++K G+ +V + L+D + K +
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++F+ + +NAV+W +++ R + G EA+ +F M+ P FT + + AC+
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G Q+H I+ D V L MY KC
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC------------------------ 319
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW-KEALDFVFLMRKTTKDID 375
++ G + AR++F+++ + NV SW AM+ GY + + +EALD M T +
Sbjct: 320 ----SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPN 375
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
T L CA L+ +++G++V + +SS V+N+L+ MY + G + AR F
Sbjct: 376 HFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD 435
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLE 494
+ ++ + +S+N V+ YA+ SEEA+ F+E++ + S FTF +LL+ A+I ++
Sbjct: 436 ILFEK-NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIG 494
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G+QIH VI++ ++N AL+ +Y++C +E A +VF++ +VI S+I GF
Sbjct: 495 KGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFA 554
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ +ALE+F M +EG++P+ +T+ +L AC H G V + F SM ++G+IP++
Sbjct: 555 KHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRM 614
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY C++ + R G + E F+N MP+ + R CR +G LG+ AA+ + E
Sbjct: 615 EHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIE 674
Query: 675 LNPWAPFQFKITTNRF 690
P P + + +N +
Sbjct: 675 QEPHDPAAYILLSNLY 690
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 211/451 (46%), Gaps = 54/451 (11%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC-----YGKC-- 90
EP ++L + + CA+ + ++ ++L S + T L+R + C Y KC
Sbjct: 268 EPDRFTL-SGVISACANMELLLLGQQLHSQAIRHGLT-----LDRCVGCCLINMYAKCSV 321
Query: 91 -GNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVSANQITYAN 148
G++ AR +FD++ + + SW AM+ Y Q G + L+LF M + V N T+++
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
L++ A L + +Q+ VK GF + +SL+ Y + + DAR+ FD + KN
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
+S+N ++ Y N +EA+ +F ++ + + FTFA+ L + + + +G QIH
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+IK + + V +L MY +CG +E A + + ++RN+ISWTSI++G+A G +
Sbjct: 502 RVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQ 561
Query: 329 ARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
A ELF++M E V +++ A+L+ + L E
Sbjct: 562 ALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNE------------------------- 596
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
G K HG I R ++ + I +D+ + G+L A + M + D +
Sbjct: 597 ---GWKHFKSMYTEHGVIPRMEHYACI------VDILGRSGSLSEAIQFINSMPYKADAL 647
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
W L G R + E ++M E P
Sbjct: 648 VWRTFL-GACRVHGNLELGKHAAKMIIEQEP 677
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 138/567 (24%), Positives = 247/567 (43%), Gaps = 53/567 (9%)
Query: 112 NAMLGAYTQ---NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
N + G Q NG + + M H G + TY+ L+ + +H
Sbjct: 32 NPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEK 91
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKE 227
+ + + + +SL+ Y KC A +F + +++ +SW+ +V + G
Sbjct: 92 LTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFR 151
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLT 286
A++ F M+ P + FA A ACS G I G +IK + DV +G L
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211
Query: 287 EMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+M+VK G L A + ++ ERN ++WT +++ G EA +LF +M
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM--------- 262
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+ +GY + D+ TL +++ CA + + +G+++H R+
Sbjct: 263 -IFSGY---------------------EPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 406 DYSSNIFVSNALLDMYRKC---GNLRSARIWFYQMSQRRDKVSWNAVLTGYARR-GQSEE 461
+ + V L++MY KC G++ +AR F Q+ + SW A++TGY ++ G EE
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILD-HNVFSWTAMITGYVQKGGYDEE 359
Query: 462 AMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F M P+ FTF + L ACAN+++L G+Q+ ++ + +L+
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y + ++ A + F ++I N++I + N EALE+F ++ +G+ T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE----LEDF 636
F +L G + Q + K G+ +I +Y R G ++ ED
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARV-IKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYAT 663
+R + T I K+G+AT
Sbjct: 539 EDRNVISWT-----SIITGFAKHGFAT 560
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 174/368 (47%), Gaps = 28/368 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + CA+ A+ ++ ++ V + + N I Y + G +DDAR FD +
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILF 438
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E++ S+N ++ AY +N LELF ++ G+ A+ T+A++L +A +G +Q
Sbjct: 439 EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQ 498
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++K G N + ++L+ Y +C + A ++F+D++++N +SW I+ + G
Sbjct: 499 IHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGF 558
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
+A+ +F KML E +RP T+ L ACS + EG + HGVI +++
Sbjct: 559 ATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEH-- 616
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELF 333
+ ++ + G L +A ++ P + + + W + + + G + + A ++
Sbjct: 617 ----YACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMI 672
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
E + ++ + Y W E + +RK K+ + AG S ++
Sbjct: 673 IEQEPHDPAAYILLSNLYASISKWDEVSN----IRKAMKEKXLIKE-------AGCSWVE 721
Query: 394 MGKEVHGF 401
+ +VH F
Sbjct: 722 VENKVHKF 729
>gi|255547019|ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 264/470 (56%), Gaps = 9/470 (1%)
Query: 146 YANVLRSSAEELELGVSKQL-HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
Y N++ + + + ++ L G+ + F N IL AY K + + +F +
Sbjct: 46 YNNLMNAYGKLGNIAYARHLFDGMPQRNSFSWNTILS-----AYSKSGHLPKMKEIFSLM 100
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEG 263
N++ VSWN I+ Y G+ +AV + M+R+ + LN TF+ L S G
Sbjct: 101 PNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELVDLG 160
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QIHG I+K F G V L +MY K G + +A+ + D+ +RN++ ++++G
Sbjct: 161 RQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGLLKF 220
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G + +++ LF+ M ER+ ISW M+ G ++ L +EA+DF MR +DQ T G +L
Sbjct: 221 GMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFGSVL 280
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C GL+ ++ GK+VH FI R+D + N+FV +AL+DMY KC LR A F +M + ++
Sbjct: 281 TACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRM-KYKNV 339
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSW A+L GY + G SEEA+ F +MQ P FT +++++CAN++SLE+G Q HC
Sbjct: 340 VSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCR 399
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+ + ++ ALV +Y KC +E + R+F E + D + ++I G+ + RE
Sbjct: 400 ALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARET 459
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+E+F M G+KPD +TF G+LLAC G V QFFDSM +YGIIP
Sbjct: 460 IELFERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQFFDSMLEEYGIIP 509
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 252/518 (48%), Gaps = 102/518 (19%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L + C ++ +A+KL +++ P FL N + YGK GN+ AR LFD MP+R+
Sbjct: 14 LLKFCCETRNQSQAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRN 73
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVS-------------------------- 140
SWN +L AY+++G + E+F M N GVS
Sbjct: 74 SFSWNTILSAYSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMR 133
Query: 141 -----ANQITYAN--VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
N+IT++ +L SS E ++LG +Q+HG I+K GF G V + S LVD Y K +
Sbjct: 134 DGVFNLNRITFSTMLILASSRELVDLG--RQIHGHIMKFGFGGYVFVGSPLVDMYAKTGL 191
Query: 194 MTDARRMFDDIQNKNAV-------------------------------SWNVIVRRYLVA 222
+ +A+++FD++ ++N V SW ++ +
Sbjct: 192 VYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQN 251
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +EA+ F +M + I +TF + L AC L++ EG Q+H II+ D D+V +
Sbjct: 252 GLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCT-DNVFV 310
Query: 283 GS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
GS L +MY KC L A + + +N++SWT+I+ GY +G EA ++F +M +RN
Sbjct: 311 GSALVDMYCKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDM-QRNG 369
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
I + D TLG +++ CA L+ ++ G + H
Sbjct: 370 I------------------------------EPDDFTLGSVISSCANLASLEEGAQFHCR 399
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ S+I VSNAL+ +Y KCG++ + F +M+ RD+VSW A+++GYA+ G++ E
Sbjct: 400 ALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMN-FRDEVSWTALISGYAQFGKARE 458
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+ F M +P TF +L AC+ + +G+Q
Sbjct: 459 TIELFERMLAHGLKPDAVTFIGVLLACSRAGLVARGQQ 496
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 224/449 (49%), Gaps = 47/449 (10%)
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+ ++H IIK + + +L Y K G + AR L D +RN SW +I+S Y+
Sbjct: 26 QAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRNSFSWNTILSAYS 85
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLG 380
SG + + +E+F+ MP R+ +SWN +L+GY +A+ + +MR +++++T
Sbjct: 86 KSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFS 145
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L + + + +G+++HG I + + +FV + L+DMY K G + A+ F +M R
Sbjct: 146 TMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDR 205
Query: 441 ------------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
RD +SW ++TG + G EEA+ F +M+
Sbjct: 206 NVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMR 265
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ ++TF ++L AC +++L +GKQ+H F+IR+ NV ALV++Y KC L
Sbjct: 266 LDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILR 325
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
YA VFK +V+ ++++G+ N EA++VF M++ GI+PD T ++ +C
Sbjct: 326 YAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCA 385
Query: 590 HEGNVKLALQFFDSMRCKY---GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ +++ QF C+ G+I + ++ LY + G +++ + N M F V
Sbjct: 386 NLASLEEGAQF----HCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEV 441
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNEL 675
I +GYA G+ AR EL
Sbjct: 442 SWTALI------SGYAQFGK--ARETIEL 462
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 106/211 (50%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C A+ E +++ + ++ T VF+ + ++ Y KC L A +F M
Sbjct: 276 FGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCKCKILRYAEAVFKRMK 335
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW A+L Y QNGF +++F DM +G+ + T +V+ S A L Q
Sbjct: 336 YKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ 395
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H + G ++ + ++LV YGKC + D+ R+F+++ ++ VSW ++ Y G
Sbjct: 396 FHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGK 455
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+E + +F +ML ++P TF L ACS
Sbjct: 456 ARETIELFERMLAHGLKPDAVTFIGVLLACS 486
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 278/501 (55%), Gaps = 8/501 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ IQ N + WN ++R + + + A+ M+ +M+ P +++F L +C+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIH ++K+ D V SL MY + G LEDAR + D R+++S T++
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G R AR++F+E+ ER+V+SWNAM+ GY + ++EAL+ M +T D+
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFI----HRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
TL +++ CA I++G++VH ++ + +SS++ + NAL+D+Y KCG++ +A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANIS 491
F +S +D VSWN ++ GY +EA+ F EM P+ T ++L ACA++
Sbjct: 257 LFEGLSC-KDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315
Query: 492 SLEQGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+++ G+ IH ++ + + R +L+++Y KC +E A +VF + N+M
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I GF + R A ++F M+ ++PD ITF G+L AC H G + L Q F SM Y
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYN 435
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
+ P+LEHY CMI L G KE E+ ++ MP P + + C+K+G L E A
Sbjct: 436 LTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFA 495
Query: 670 RRLNELNPWAPFQFKITTNRF 690
++L ++ P + + +N +
Sbjct: 496 QKLIKIEPENSGSYVLLSNIY 516
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 237/543 (43%), Gaps = 103/543 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN ML + + P LE+++ M G N ++ +L+S A+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------------- 196
+Q+H ++K G + + +SL+ Y + + D
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 197 ------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
AR++FD+I ++ VSWN ++ Y+ G +EA+ +F +M+R ++RP
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKI----DFEGDDVVLGSLTEMYVKCGRLEDARG 300
T + + AC+ S G Q+H + F ++ +L ++Y KCG +E A G
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
L + ++++SW +++ GY T + L+KEA
Sbjct: 257 LFEGLSCKDVVSWNTLIGGY-------------------------------THTNLYKEA 285
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALL 418
L M ++ + + VTL +L CA L I +G+ +H +I + ++ + +L+
Sbjct: 286 LLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLI 345
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
DMY KCG++ +A F M R SWNA++ G+A G++ A FS M+ P
Sbjct: 346 DMYAKCGDIEAAHQVFNSM-LYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDD 404
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
TF LL+AC++ L+ G+QI + + +
Sbjct: 405 ITFVGLLSACSHSGLLDLGRQI----------------------------FKSMTQDYNL 436
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ L+ C +LG H+ +EA E+ M E PD + + +L AC GN++LA
Sbjct: 437 TPKLEHYGCMIDLLG--HSGLFKEAEEMIHTMPME---PDGVIWCSLLKACKKHGNLELA 491
Query: 598 LQF 600
F
Sbjct: 492 ESF 494
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 224/518 (43%), Gaps = 77/518 (14%)
Query: 7 TILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLES 66
T+L+ S S P + GHL P SYS + L + CA SKA E R++ +
Sbjct: 34 TMLRGHASSSDPVSALEMYVRMVSLGHL----PNSYS-FPFLLKSCAKSKAFEEGRQIHA 88
Query: 67 NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD------------------------- 101
++ ++ I Y + G L+DAR +FD
Sbjct: 89 QVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRS 148
Query: 102 ------EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
E+ ERD SWNAM+ Y +NG LELF +M + V ++ T +V+ + A+
Sbjct: 149 ARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQ 208
Query: 156 ELELGVSKQLHGLI----VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + +Q+H + GF ++ + ++L+D Y KC + A +F+ + K+ VS
Sbjct: 209 SGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVS 268
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y KEA+++F +MLR P + T + L AC+ L + G IH V I
Sbjct: 269 WNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIH-VYI 327
Query: 272 KIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+G + + SL +MY KCG +E A + + R++ SW +++ G+A+ GR
Sbjct: 328 DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANA 387
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +LF+ MR + D +T +L+ C+
Sbjct: 388 AFDLFSR-------------------------------MRGNRVEPDDITFVGLLSACSH 416
Query: 389 LSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +G+++ + ++ + + + ++D+ G + A + M D V W
Sbjct: 417 SGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWC 476
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
++L + G E A SF++ + P LL+
Sbjct: 477 SLLKACKKHGNLELA-ESFAQKLIKIEPENSGSYVLLS 513
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 311/620 (50%), Gaps = 36/620 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-- 134
VF+ N I YGK G ++ A +FD+MP+R+ SWN+++ A +NG + LF +
Sbjct: 231 VFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLN 290
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ + T V+ A + E+ + HGL +K G CG + + SSL+D Y KC +
Sbjct: 291 GDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYL 350
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFA 253
+AR +FD KN +SWN ++ Y + + A + KM ED +N T N L
Sbjct: 351 CEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPV 409
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C + +IHG ++ F D ++ +
Sbjct: 410 CEEEIQFLKLKEIHGYALRHGFIQSDELVAN----------------------------- 440
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+ V+GYA G + A +F M + V SWNA++ G+ ++ ++ALD LMR + +
Sbjct: 441 -AFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLE 499
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D T+ +L+ CA L + GKE+HG + RN + + F+ +L+ +Y +CG + A+++
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F M + ++ V WN ++ G+++ +A+ F +M + P + + L AC+ +S+
Sbjct: 560 FDNM-EEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSA 618
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GK++HCF +++ + +L+++Y KC C+E + +F + N +I G
Sbjct: 619 LRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITG 678
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + GR+A+E+F M+ G +PD +TF +L AC H G V L++ M+ +GI P
Sbjct: 679 YGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKP 738
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY C++ + R G + E + VN +P P + + CR +GE A +L
Sbjct: 739 KLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKL 798
Query: 673 NELNPWAPFQFKITTNRFDR 692
EL P + + +N + R
Sbjct: 799 LELGPDKAENYVLISNFYAR 818
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 228/499 (45%), Gaps = 41/499 (8%)
Query: 149 VLRSSAEELELGVSKQLHGLI-VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L+ E + + +++H I F +V+L + LV Y C D+ +F+ + K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQI 266
N WN ++ YL ++AV +F +M+ + P NFT + AC + G +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG +K D V +L MY K G +E A + D+ +RN++SW S++ +G
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
E+ LF +L G E L D T+ ++ +C
Sbjct: 279 EESYGLF-----------KGLLNG-------DEGL-----------MPDVATMVTVIPLC 309
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A E+++G HG + + V+++LLDMY KCG L AR+ F + ++ +SW
Sbjct: 310 ARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD--TNEKNVISW 367
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
N+++ GY++ A +MQ E + ++ T +L C + K+IH + +
Sbjct: 368 NSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYAL 427
Query: 505 RNCY-EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
R+ + + + + A V Y KC L YA VF S V N++I G N R+AL
Sbjct: 428 RHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKAL 487
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC--MI 621
+++ LM+ G++PD T +L AC ++ + SM + G +L+ + C ++
Sbjct: 488 DLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM-LRNGF--ELDEFICISLV 544
Query: 622 KLYCRYGYMKELEDFVNRM 640
LY + G + + F + M
Sbjct: 545 SLYVQCGKILLAKLFFDNM 563
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 180/381 (47%), Gaps = 39/381 (10%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP +++ A L CA K++ +++ +++ F+ + Y +CG + A+
Sbjct: 499 EPDLFTI-ASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAK 557
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
FD M E++ WN M+ ++QN FP L++F M S + ++I+ L + ++
Sbjct: 558 LFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVS 617
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + K+LH VK + + SL+D Y KC M ++ +FD + K V+WNV++
Sbjct: 618 ALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLIT 677
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-----IK 272
Y + G+G++A+ +F M RP + TF L AC+ EG++ G + IK
Sbjct: 678 GYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIK 737
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS----------GYA 321
E V+ +M + GRL +A L+++ PD+ + W+S++S G
Sbjct: 738 PKLEHYACVV----DMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEK 793
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
++ ++ EL + E V+ N Y R W E V MR+ K+I
Sbjct: 794 VANKL---LELGPDKAENYVLISNF----YARLGKWDE----VRKMRQRMKEIG------ 836
Query: 382 ILNVCAGLSEIKMGKEVHGFI 402
L AG S I++G +V F+
Sbjct: 837 -LQKDAGCSWIEIGGKVSRFL 856
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 7/259 (2%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+GL+L +C I++G+++H FI + + +++ + L+ MY C + + + F
Sbjct: 96 IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVF-NA 154
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQ 495
S+R++ WNA+L+GY R +A+ F EM T P FT ++ AC + +
Sbjct: 155 SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL 214
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+ +H F ++ +V AL+ +Y K +E A++VF + +++ NS++
Sbjct: 215 GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLE 274
Query: 556 NERGREALEVF-GLMK-KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N E+ +F GL+ EG+ PD T ++ C +G V+L + F + K G+ +
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGE 333
Query: 614 LEHYECMIKLYCRYGYMKE 632
L+ ++ +Y + GY+ E
Sbjct: 334 LKVNSSLLDMYSKCGYLCE 352
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 305/621 (49%), Gaps = 38/621 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P +F LN + Y G+L A+ LF P R+ +W M+ A+ G L LF
Sbjct: 70 PHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M GV +++T VL L LH +K G +V + ++L+DAY K
Sbjct: 130 AMLGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHG 184
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ ARR+F ++ +K+AV++N ++ G +A+ +F M R I +FTF++ L
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ ++ G Q+H ++++ + V SL + Y KC L+D R
Sbjct: 245 VAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMR------------- 291
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
LF+EMPER+ +S+N ++A Y + L M+K
Sbjct: 292 ------------------RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D + +L+V L ++ +GK++H + +S + NAL+DMY KCG L +A+
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F S++ +SW A++TGY + GQ EEA+ FS+M+ RP + TF +++ A ++++
Sbjct: 394 NFSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 452
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ G+Q+H ++IR+ Y+ +V LV++Y KC CL+ A+R F E + I N++I
Sbjct: 453 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ H + A+++F M G PD +TF +L AC H G +++F M+ +Y I
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY C+I R G +++ + MPF + I CR +G L AA +
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 632
Query: 672 LNELNPWAPFQFKITTNRFDR 692
L + P + I +N + R
Sbjct: 633 LFGMEPTDATPYVILSNIYAR 653
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 16/434 (3%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ ++ + + A ++ ++ + ++ VF+ N ++ Y KC LDD R
Sbjct: 233 PATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRR 292
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFDEMPERD S+N ++ AY N L LF +M G + YA +L + +
Sbjct: 293 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 352
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + KQ+H +V G +L ++L+D Y KC ++ A+ F + K+A+SW ++
Sbjct: 353 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 412
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G +EA+ +F M R +RP TF++ + A S L+ G Q+H +I+ ++
Sbjct: 413 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 472
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
L +MY KCG L++A D+ ERN ISW +++S YA G + A ++F M
Sbjct: 473 VFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLH 532
Query: 339 ----RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN----VCAGLS 390
+ +++ ++LA + + L E + + LM+ Q ++ V L
Sbjct: 533 CGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH------QYSISPWKEHYACVIDTLG 586
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM--SQRRDKVSWNA 448
+ +V + + ++ + ++L R GN AR+ ++ + D +
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 646
Query: 449 VLTGYARRGQSEEA 462
+ YAR GQ E+A
Sbjct: 647 LSNIYARAGQWEDA 660
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 11/287 (3%)
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
+ G L AR + DQ +NI S I+S Y+ SG + A+ LF P RN +W M+
Sbjct: 54 LSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMR 113
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV--CAGLSEIKMGKEVHGFIHRNDY 407
+ + +AL M D+VT+ +LN+ C S +H F +
Sbjct: 114 AHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGL 166
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++FV N LLD Y K G L +AR F +M +D V++NA++ G ++ G +A+ F+
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQLFA 225
Query: 468 EMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ P + FTF ++L A ++ L G Q+H V+R+ +NV +L++ Y+KC
Sbjct: 226 AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCD 285
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
CL+ R+F E D + N +I + N+ L +F M+K G
Sbjct: 286 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLG 332
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 174/566 (30%), Positives = 288/566 (50%), Gaps = 37/566 (6%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L+L ++ +SA + YA++L++ + L Q+H ++K G + + +SL+
Sbjct: 102 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 187 AYGKCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y K + R++FD + K+ +SW ++ Y+ G ++ +F+KML + P F
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
T + + ACS L G HGV++ F+ + V+ +L +M+ + L+DAR
Sbjct: 222 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDAR------ 275
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+LF+E+ E + I W ++++ TR+ + EAL F +
Sbjct: 276 -------------------------QLFDELLEPDAICWTSIISALTRNDFFDEALRFFY 310
Query: 366 LMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M++ D T G +L C L +K GKEVH + + N+ V ++L+DMY KC
Sbjct: 311 SMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKC 370
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLL 484
G++ ++ F +M + + VSW+A+L GY + G + + F +M+ + + F T+L
Sbjct: 371 GSVGESQRIFDRMPIK-NSVSWSALLGGYCQNGDFKSVIQIFRKME---KVDLYCFGTIL 426
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
CA ++++ QGK++HC IR +V+ ALV++Y KC C+EYA +F + ++I
Sbjct: 427 RTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLI 486
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
NSMI GF N RG EAL +F M KEGIKPD+I+F GIL AC H G V ++F SM
Sbjct: 487 TWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISM 546
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
YGI +EHY CM+ L R G ++E E + F + + C +
Sbjct: 547 TKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEI 606
Query: 665 GEWAARRLNELNPWAPFQFKITTNRF 690
E A+R+ EL P + + N +
Sbjct: 607 AERIAKRVMELEPDYHLSYVLLANVY 632
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 284/572 (49%), Gaps = 49/572 (8%)
Query: 26 LTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE 85
L K+I S +PV LYA L Q C A ++ ++++ F+ N +
Sbjct: 105 LLKSIDPGEISAKPV---LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 86 CYGKCG-NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
Y K G + + R +FD + +D SW +M+ Y + G P +LELF M GV N
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T + V+++ +E +L + + HG+++ RGF N ++ S+L+D +G+ + DAR++FD++
Sbjct: 222 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 281
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEG 263
+A+ W I+ EA+ F+ M R+ + P FTF L AC L +G
Sbjct: 282 LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQG 341
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++H +I F G+ VV SL +MY KCG + +++ + D+ +N +SW++++ GY +
Sbjct: 342 KEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQN 401
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G + ++F +M + +D G IL
Sbjct: 402 GDFKSVIQIFRKM-----------------------------------EKVDLYCFGTIL 426
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAGL+ ++ GKEVH R ++ V +AL+D+Y KCG + A+ F QM R+
Sbjct: 427 RTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPV-RNL 485
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
++WN+++ G+A+ G+ EEA+ F++M E +P +F +L AC++ +++G++
Sbjct: 486 ITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFIS 545
Query: 503 VIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ ++ Y I V +V++ + LE A + + S D + +LG C
Sbjct: 546 MTKD-YGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNY 604
Query: 561 EALEVFGLMKKEGIKPD-HITFHGILLACIHE 591
E E E ++PD H+++ +LLA +++
Sbjct: 605 EIAERIAKRVME-LEPDYHLSY--VLLANVYK 633
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 189/642 (29%), Positives = 307/642 (47%), Gaps = 32/642 (4%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S EP Y LF+LC +A+ + + +P+ + L N + + G +
Sbjct: 90 SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWH 149
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F +MPERD SWN M+G Y + GF L+L+ M +G+ + T+ VLR+
Sbjct: 150 AWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGG 209
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ + +++H +++ GF V + ++LV Y KC + AR++FD + + +SWN +
Sbjct: 210 IPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAM 269
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + + + +F ML +++P T + A LS ++HG +K F
Sbjct: 270 IAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGF 329
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D SL +MY GR+ DA G+I F+
Sbjct: 330 AIDVAFCNSLIQMYTSLGRMGDA-------------------------GKI------FSR 358
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M ++ +SW AM++GY ++ +AL+ LM D VT+ L CA L + +G
Sbjct: 359 METKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVG 418
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H + + V+NALL+MY K ++ A I ++ +D VSW++++ G+
Sbjct: 419 IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA-IEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 456 RGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
+S EA+ F M +P+ TF L+ACA +L GK+IH +V+R
Sbjct: 478 NHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP 537
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC YA F S DV+ N M+ GF + G AL +F M + G
Sbjct: 538 NALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEH 597
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF +L AC G V + F M K+ I+P L+HY CM+ L R G + E +
Sbjct: 598 PDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYN 657
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+NRMP P + + + CR + + LGE AA+ + EL P
Sbjct: 658 LINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEP 699
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 171/392 (43%), Gaps = 34/392 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-N 135
V + N +E Y K ++D A +F M E+D SW++M+ + N L F M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
H V N +T+ L + A L K++H +++ G + ++L+D Y KC +
Sbjct: 494 H--VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A F K+ VSWN+++ ++ G G A+ +F +M+ P TF L ACS
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611
Query: 256 FLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW 313
+G ++ H + K + + ++ + G+L +A L+++ P + + W
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671
Query: 314 TSIVSGYAISGRIREARELFNEMP---ERNVISWNAMLAG-YTRSLLWKEALDFVFLMRK 369
++++G I R E EL ++ E N ++++ +L YT + W + MR+
Sbjct: 672 GALLNGCRIH-RHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI----FVSNALLDMYRKCG 425
+ D G S +++ H F+ ++ I V + + + + CG
Sbjct: 731 KGLEQDN-----------GCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACG 779
Query: 426 NLRSARIWFYQMSQRRDK-VSWNAVLTGYARR 456
F + DK VS + +L G++ R
Sbjct: 780 --------FAPVESLEDKEVSEDDILCGHSER 803
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 267/485 (55%), Gaps = 12/485 (2%)
Query: 215 IVRRYLVAGNGKEAVVMFF--KMLREDI-------RPLNFTFANALFACSFLSSPYEGMQ 265
+V+R N KEA+ + K LRE I RP T++ L C L + EGM+
Sbjct: 51 LVKRLCKDNNFKEAIDILCEQKRLREAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMK 110
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H F V+ + +MY+KC L +A+ L D+ ER++ SW ++SGYA +GR
Sbjct: 111 VHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGR 170
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILN 384
++EAR+LF++M ER+ SW AM +GY R +EAL+ F + R ++ T+ L
Sbjct: 171 LQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALA 230
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
A + + +GKE+HG I R + V +AL DMY KCG++ AR + + RD V
Sbjct: 231 ASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEAR-HIFDKTVDRDVV 289
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SW A++ Y + G+ EE FS++ + P++FTF +L ACA+ ++ E GKQ+H ++
Sbjct: 290 SWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYM 349
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
R ++ + LV +YTKC ++ A RVF D++ S+I G+ N + EAL
Sbjct: 350 TRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEAL 409
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+ F L+ K G +PDHITF G+L AC H G V L++FDS++ K+G+ +HY C+I L
Sbjct: 410 QFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDL 469
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G ++E ED +++MP P + + CR +G L + AA L E+ P P +
Sbjct: 470 LSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATY 529
Query: 684 KITTN 688
N
Sbjct: 530 TTLAN 534
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 220/488 (45%), Gaps = 78/488 (15%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC------ 90
D P S + Y+ L QLC +A+ E K+ ++ T P V + NR ++ Y KC
Sbjct: 85 DRP-SAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNA 143
Query: 91 -------------------------GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
G L +AR LFD+M ERD SW AM Y ++
Sbjct: 144 KRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHE 203
Query: 126 RTLELFLDMN-HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
LELF M H N+ T ++ L +SA L + K++HG I++ G + ++ S+L
Sbjct: 204 EALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSAL 263
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
D YGKC + +AR +FD +++ VSW ++ RY G +E +F +L+ I P
Sbjct: 264 SDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNE 323
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FTF+ L AC+ ++ G Q+HG + +I F+ +L MY KCG +++AR + +
Sbjct: 324 FTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNG 383
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+++SWTS++SGYA +G+ P+ EAL F
Sbjct: 384 MPRPDLVSWTSLISGYAQNGQ-----------PD--------------------EALQFF 412
Query: 365 FLMRKTTKDIDQVTLGLILNVCA-------GLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
L+ K+ D +T +L+ C GL KE HG H D+ + L
Sbjct: 413 ELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYA------CL 466
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK 477
+D+ + G L+ A +M DK W ++L G G + A + +E +E P
Sbjct: 467 IDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRA-AEALFEIEPEN 525
Query: 478 FTFETLLA 485
T LA
Sbjct: 526 PATYTTLA 533
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 159/330 (48%), Gaps = 30/330 (9%)
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
+ YGKCG++ +AR +FD+ +RD SW AM+ Y + G LF D+ SG+ N+
Sbjct: 265 DMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEF 324
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T++ VL + A+ + KQ+HG + + GF + S+LV Y KC + +ARR+F+ +
Sbjct: 325 TFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGM 384
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ VSW ++ Y G EA+ F +L+ +P + TF L AC+ +G+
Sbjct: 385 PRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGL 444
Query: 265 QI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSI 316
+ HG+ D L ++ + GRL++A ++D+ P E + W S+
Sbjct: 445 EYFDSIKEKHGLTHTADH------YACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASL 498
Query: 317 VSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+ G I G + R A LF PE N ++ + Y + LW + +M
Sbjct: 499 LGGCRIHGNLKLAKRAAEALFEIEPE-NPATYTTLANIYATAGLWGGVAEVRKVMD---- 553
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
G++ GLS I++ +EVH F+
Sbjct: 554 -----ARGVVKK--PGLSWIEIKREVHVFL 576
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/516 (32%), Positives = 279/516 (54%), Gaps = 4/516 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ AY K +++ R F+ + +++ V+WNV++ Y ++G AV + M+
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 237 REDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++ L T L S G QIHG +IK+ FE +V L +MY K G +
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
DA+ + D+RN + + +++ G G I +A +LF M E++ +SW+AM+ G ++
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNG 246
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+ KEA++ M+ +DQ G +L C GL I G+++H I R + +I+V +
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGS 306
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KC L A+ F +M Q+ + VSW A++ GY + G++ EA+ F +MQ
Sbjct: 307 ALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGID 365
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P +T ++ACANISSLE+G Q H I + +LV +Y KC ++ + R+
Sbjct: 366 PDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRL 425
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E + D + +M+ + R EA+++F M + G+KPD +T G++ AC G V
Sbjct: 426 FNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLV 485
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ ++F+ M +YGI+P HY CMI L+ R G ++E F+N MPF P +
Sbjct: 486 EKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR G +G+WAA L EL+P P + + ++ +
Sbjct: 546 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 581
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 276/584 (47%), Gaps = 106/584 (18%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
H + L SS + AR++ + P P +F N + Y K G+L + F+++P+R
Sbjct: 46 HAYALIRSS---IYARRVFDGI----PQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDR 98
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN--QITYANVLRSSAEELELGVSKQ 164
DG +WN ++ Y+ +G G ++ + M S+N ++T +L+ S+ + + KQ
Sbjct: 99 DGVTWNVLIEGYSLSGLVGAAVKAYNTMMKD-FSSNLTRVTLMTMLKLSSSNGHVSLGKQ 157
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF----------------------- 201
+HG ++K GF +++ S L+D Y K ++DA+++F
Sbjct: 158 IHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGM 217
Query: 202 --DDIQ-----NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
D +Q K++VSW+ +++ G KEA+ F +M E ++ + F + L AC
Sbjct: 218 IEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPAC 277
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
L + +G QIH II+ + + V +L +MY KC L A+ + D+ ++N++SWT
Sbjct: 278 GGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWT 337
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++V GY +GR EA ++F LD M+++ D
Sbjct: 338 AMVVGYGQTGRAGEAVKIF---------------------------LD----MQRSGIDP 366
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D TLG ++ CA +S ++ G + HG I VSN+L+ +Y KCG++ + F
Sbjct: 367 DHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLF 426
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M+ RD+VSW A+++ YA+ G++ EA+ F +M Q +P T +++AC+ +
Sbjct: 427 NEMNV-RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLV 485
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E+G++ +I N Y I V C+ I +F S ++
Sbjct: 486 EKGQRYFELMI-NEYGI--------VPSNGHYSCM---IDLFSRSGRIE----------- 522
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
E G + +PD I + +L AC ++GN+++
Sbjct: 523 ----------EAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIG 556
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 179/387 (46%), Gaps = 21/387 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C AI + R++ + ++ +++ + I+ Y KC L A+ +FD M
Sbjct: 270 FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+++ SW AM+ Y Q G G +++FLDM SG+ + T + + A L Q
Sbjct: 330 QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQ 389
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HG + G + + +SLV YGKC + D+ R+F+++ ++ VSW +V Y G
Sbjct: 390 FHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGR 449
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFEGDDVVLG 283
EA+ +F KM++ ++P T + ACS +G + ++I + +
Sbjct: 450 AVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYS 509
Query: 284 SLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRI---REARELFNEMPER 339
+ +++ + GR+E+A G ++ P + I WT+++S G + + A E E+
Sbjct: 510 CMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH 569
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ + + + Y W D V +R+ K+ + + G S IK ++H
Sbjct: 570 HPAGYTLLSSIYASKGKW----DCVAQLRRGMKEKN-------VRKEPGQSWIKWKGKLH 618
Query: 400 GFIHRND---YSSNIFVSNALLDMYRK 423
F ++ YS I+ L ++Y+K
Sbjct: 619 SFSADDESSPYSDQIYAK--LEELYQK 643
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 126/318 (39%), Gaps = 65/318 (20%)
Query: 386 CAGLSEIKMGKEVHG-----------FIHRNDYSS--------------------NIFVS 414
C GL + K +HG F+H N + N+F
Sbjct: 13 CIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSW 72
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWE 472
N LL Y K G+L F ++ RD V+WN ++ GY+ G A+ +++ M +
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFS 131
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+ ++ T T+L ++ + GKQIH VI+ +E ++ L+++Y+K C+ A
Sbjct: 132 SNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAK 191
Query: 533 RVFKESSSLDVIICNS------------------------------MILGFCHNERGREA 562
+VF + ++ N+ MI G N +EA
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEA 251
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+E F MK EG+K D F +L AC G + Q + + + + +I
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI-IRTNLQDHIYVGSALID 310
Query: 623 LYCRYGYMKELEDFVNRM 640
+YC+ + + +RM
Sbjct: 311 MYCKCKCLHYAKTVFDRM 328
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 175/595 (29%), Positives = 311/595 (52%), Gaps = 37/595 (6%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
L RA+ + ++DA LFDEM + D WN M+ +T G ++ + M +GV
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
A+ TY V++S A L K++H +++K GF +V + +SL+ Y K DA +
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+++ ++ VSWN ++ YL G+G ++++F +ML+ +P F+ +AL ACS + S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
P G +IH ++ E DV++ TSI+
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMV------------------------------MTSILDM 276
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y+ G + A +FN M +RN+++WN M+ Y R+ +A F+ + + ++ Q +
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA--FLCFQKMSEQNGLQPDV 334
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+N+ S I G+ +HG+ R + ++ + AL+DMY +CG L+SA + F +M++
Sbjct: 335 ITSINLLPA-SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE 393
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGK 497
+ + +SWN+++ Y + G++ A+ F E+ W++ P T ++L A A SL +G+
Sbjct: 394 K-NVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+IH +++++ Y N + +LV +Y C LE A + F DV+ NS+I+ + +
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
GR ++ +F M + P+ TF +L AC G V ++F+SM+ +YGI P +EHY
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
CM+ L R G + F+ MPF PT + + + R + T+ E+AA ++
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 626
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 228/455 (50%), Gaps = 39/455 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + A ++ E +K+ + ++ V++ N I Y K G DA +F+EMP
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SWN+M+ Y G +L LF +M G ++ + + L + + + K+
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 165 LHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H V+ R G+V++ +S++D Y K ++ A R+F+ + +N V+WNV++ Y G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 224 NGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+A + F KM ++ ++P T N L A + L EG IHG ++ F V+
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLE 368
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY +CG+L+ A + D+ E+N+ISW SI++ Y +G+ A ELF E+
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL------ 422
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W++ L D T+ IL A + G+E+H +I
Sbjct: 423 -WDSSLVP------------------------DSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
++ Y SN + N+L+ MY CG+L AR F + +D VSWN+++ YA G +
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ FSEM P+K TF +LLAAC+ +++G
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 115/211 (54%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+ AI+E R + + P + L I+ YG+CG L A +FD M E++ SWN++
Sbjct: 343 ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSI 402
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ AY QNG LELF ++ S + + T A++L + AE L L +++H IVK +
Sbjct: 403 IAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY 462
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
N I+ +SLV Y C + DAR+ F+ I K+ VSWN I+ Y V G G+ +V +F +
Sbjct: 463 WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSE 522
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
M+ + P TFA+ L ACS EG +
Sbjct: 523 MIASRVNPNKSTFASLLAACSISGMVDEGWE 553
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 305/621 (49%), Gaps = 38/621 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P +F LN + Y G+L A+ LF P R+ +W M+ A+ G L LF
Sbjct: 70 PHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M GV +++T VL L LH +K G +V + ++L+DAY K
Sbjct: 130 AMLGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHG 184
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ ARR+F ++ +K+AV++N ++ G +A+ +F M R I +FTF++ L
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ ++ G Q+H ++++ + V SL + Y KC L+D R
Sbjct: 245 VAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMR------------- 291
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
LF+EMPER+ +S+N ++A Y + L M+K
Sbjct: 292 ------------------RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D + +L+V L ++ +GK++H + +S + NAL+DMY KCG L +A+
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F S++ +SW A++TGY + GQ EEA+ FS+M+ RP + TF +++ A ++++
Sbjct: 394 NFSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 452
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ G+Q+H ++IR+ Y+ +V LV++Y KC CL+ A+R F E + I N++I
Sbjct: 453 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ H + A+++F M G PD +TF +L AC H G +++F M+ +Y I
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 572
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY C+I R G +++ + MPF + I CR +G L AA +
Sbjct: 573 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 632
Query: 672 LNELNPWAPFQFKITTNRFDR 692
L + P + I +N + R
Sbjct: 633 LFGMEPTDATPYVILSNIYAR 653
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 16/434 (3%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ ++ + + A ++ ++ + ++ VF+ N ++ Y KC LDD R
Sbjct: 233 PATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRR 292
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFDEMPERD S+N ++ AY N L LF +M G + YA +L + +
Sbjct: 293 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 352
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + KQ+H +V G +L ++L+D Y KC ++ A+ F + K+A+SW ++
Sbjct: 353 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 412
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G +EA+ +F M R +RP TF++ + A S L+ G Q+H +I+ ++
Sbjct: 413 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 472
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
L +MY KCG L++A D+ ERN ISW +++S YA G + A ++F M
Sbjct: 473 VFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLH 532
Query: 339 ----RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG----LILNVCAGLS 390
+ +++ ++LA + + L E + + LM+ Q ++ V L
Sbjct: 533 CGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH------QYSISPWKEHYACVIDTLG 586
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM--SQRRDKVSWNA 448
+ +V + + ++ + ++L R GN AR+ ++ + D +
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 646
Query: 449 VLTGYARRGQSEEA 462
+ YAR GQ E+A
Sbjct: 647 LSNIYARAGQWEDA 660
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 11/284 (3%)
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G L AR + DQ +NI S I+S Y+ SG + A+ LF P RN +W M+ +
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 116
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV--CAGLSEIKMGKEVHGFIHRNDYSSN 410
+ +AL M D+VT+ +LN+ C S +H F + ++
Sbjct: 117 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTH 169
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+FV N LLD Y K G L +AR F +M +D V++NA++ G ++ G +A+ F+ M+
Sbjct: 170 VFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQLFAAMR 228
Query: 471 WETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
P + FTF ++L A ++ L G Q+H V+R+ +NV +L++ Y+KC CL+
Sbjct: 229 RAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
R+F E D + N +I + N+ L +F M+K G
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLG 332
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/566 (30%), Positives = 288/566 (50%), Gaps = 37/566 (6%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L+L ++ +SA + YA++L++ + L Q+H ++K G + + +SL+
Sbjct: 43 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 187 AYGKCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y K + R++FD + K+ +SW ++ Y+ G ++ +F+KML + P F
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
T + + ACS L G HGV++ F+ + V+ +L +M+ + L+DAR
Sbjct: 163 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDAR------ 216
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+LF+E+ E + I W ++++ TR+ + EAL F +
Sbjct: 217 -------------------------QLFDELLEPDAICWTSIISALTRNDFFDEALRFFY 251
Query: 366 LMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M++ D T G +L C L +K GKEVH + + N+ V ++L+DMY KC
Sbjct: 252 SMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKC 311
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLL 484
G++ ++ F +M + + VSW+A+L GY + G + + F +M+ + + F T+L
Sbjct: 312 GSVGESQRIFDRMPIK-NSVSWSALLGGYCQNGDFKSVIQIFRKME---KVDLYCFGTIL 367
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
CA ++++ QGK++HC IR +V+ ALV++Y KC C+EYA +F + ++I
Sbjct: 368 RTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLI 427
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
NSMI GF N RG EAL +F M KEGIKPD+I+F GIL AC H G V ++F SM
Sbjct: 428 TWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISM 487
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
YGI +EHY CM+ L R G ++E E + F + + C +
Sbjct: 488 TKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEI 547
Query: 665 GEWAARRLNELNPWAPFQFKITTNRF 690
E A+R+ EL P + + N +
Sbjct: 548 AERIAKRVMELEPDYHLSYVLLANVY 573
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 284/572 (49%), Gaps = 49/572 (8%)
Query: 26 LTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE 85
L K+I S +PV LYA L Q C A ++ ++++ F+ N +
Sbjct: 46 LLKSIDPGEISAKPV---LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 86 CYGKCG-NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
Y K G + + R +FD + +D SW +M+ Y + G P +LELF M GV N
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T + V+++ +E +L + + HG+++ RGF N ++ S+L+D +G+ + DAR++FD++
Sbjct: 163 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 222
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEG 263
+A+ W I+ EA+ F+ M R+ + P FTF L AC L +G
Sbjct: 223 LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQG 282
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++H +I F G+ VV SL +MY KCG + +++ + D+ +N +SW++++ GY +
Sbjct: 283 KEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQN 342
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G + ++F +M + +D G IL
Sbjct: 343 GDFKSVIQIFRKMEK-----------------------------------VDLYCFGTIL 367
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CAGL+ ++ GKEVH R ++ V +AL+D+Y KCG + A+ F QM R+
Sbjct: 368 RTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPV-RNL 426
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
++WN+++ G+A+ G+ EEA+ F++M E +P +F +L AC++ +++G++
Sbjct: 427 ITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFIS 486
Query: 503 VIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ ++ Y I V +V++ + LE A + + S D + +LG C
Sbjct: 487 MTKD-YGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNY 545
Query: 561 EALEVFGLMKKEGIKPD-HITFHGILLACIHE 591
E E E ++PD H+++ +LLA +++
Sbjct: 546 EIAERIAKRVME-LEPDYHLSY--VLLANVYK 574
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 185/659 (28%), Positives = 324/659 (49%), Gaps = 34/659 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H + P Y L + + C K + R + + + F+ N I Y G+
Sbjct: 136 HWTAVIPTPYVL-SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGS 194
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
A +F +M D ++N ++ + Q G L++F +M SG+ + +T A++L +
Sbjct: 195 FKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAA 254
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A +L KQLH ++K G + I E SL+D Y KC + A +F+ N V W
Sbjct: 255 CASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLW 314
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N+++ Y + ++ +F +M I P FT+ L C+ G QIH + IK
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
FE D V G L +MY K G L+ AR +L+
Sbjct: 375 NGFESDMYVSGVLIDMYSKYGCLDKARKILEM---------------------------- 406
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
+ +R+V+SW +M+AGY + +EAL M+ D + L + CAG+ +
Sbjct: 407 ---LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAM 463
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G ++H ++ + Y+++I + N L+++Y +CG A F ++ + +D+++WN +++G
Sbjct: 464 RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI-EHKDEITWNGLISG 522
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ + ++A+ F +M Q + + FTF + ++A AN++ ++QGKQ+H ++ +
Sbjct: 523 FGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSE 582
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
AL+ +Y KC +E A +F E S + + N++I + RG EAL++F MK+
Sbjct: 583 TEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQ 642
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
EG+KP+ +TF G+L AC H G V+ L +F SM YG+ P +HY C++ + R G +
Sbjct: 643 EGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLD 702
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
FV+ MP + R + C+ + +GE AA+ L EL P + + +N +
Sbjct: 703 RARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAY 761
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 268/584 (45%), Gaps = 41/584 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F E+ RD SW AML Y Q+G L+ M+ + V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++VL + + + +H + K+ FC + ++L+ Y A R+
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ + V++N ++ + G+G+ A+ +F +M +RP T A+ L AC+ +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H ++K D + GSL ++YVKCG +E A + + D N++ W ++ Y
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ ++ E+F + M+ T +Q T
Sbjct: 322 GQISDLAKSFEIFGQ-------------------------------MQATGIHPNQFTYP 350
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C +I++G+++H +N + S+++VS L+DMY K G L AR +M ++
Sbjct: 351 CILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARK-ILEMLEK 409
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
RD VSW +++ GY + EEA+ +F EMQ W P + +ACA I ++ QG
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW---PDNIGLASAASACAGIKAMRQG 466
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH V + Y ++ LV +Y +C E A +F+E D I N +I GF +
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQS 526
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
++AL VF M + G K + TF + A + ++K Q K G + E
Sbjct: 527 RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRA-VKTGHTSETEV 585
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
+I LY + G +++ + + M V I C ++G
Sbjct: 586 ANALISLYGKCGSIEDAKMIFSEMSLRNEVSW-NTIITSCSQHG 628
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 224/470 (47%), Gaps = 34/470 (7%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H V RG + ++ + L+D Y K ++ AR++F ++ +++ VSW ++ Y +G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
GKEA ++ +M + P + ++ L AC+ +G IH + K F + V
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +Y+ G + A + + +++ +++SG+A G A ++F+EM
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEM------- 236
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
L+G +R D VT+ +L CA + +++ GK++H ++
Sbjct: 237 ---QLSG----------------LRP-----DCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S + +LLD+Y KCG++ +A F + R + V WN +L Y + ++
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAKSF 331
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ P++FT+ +L C +E G+QIH I+N +E ++ G L+++Y
Sbjct: 332 EIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMY 391
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+K CL+ A ++ + DV+ SMI G+ ++ EAL F M+ G+ PD+I
Sbjct: 392 SKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLA 451
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
AC ++ LQ + G + + ++ LY R G +E
Sbjct: 452 SAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEE 500
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 3/243 (1%)
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E+H ++ + N L+D+Y K G + AR F ++S RD VSW A+L+GYA+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS-RDHVSWVAMLSGYAQS 122
Query: 457 GQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G +EA +S+M W P+ + ++L+AC QG+ IH V + +
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+ +Y + A RVF + D + N++I G G AL++F M+ G++
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +T +L AC G+++ Q S K G+ ++ LY + G ++ D
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQ-LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 636 FVN 638
N
Sbjct: 302 IFN 304
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 177/607 (29%), Positives = 292/607 (48%), Gaps = 34/607 (5%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T ++ N I Y KCG + A +F E +RD SWN M+ + G LE
Sbjct: 31 TASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKS 90
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G + + ++ ++L+ A + V +Q+H ++VK G+ GNV S+L+D Y KC
Sbjct: 91 MKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCER 150
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DA +F I +N+V+WN ++ Y G+ A + M E + + TFA L
Sbjct: 151 VEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTL 210
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
Q+H I+K D V ++ Y +CG +E
Sbjct: 211 LDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIE----------------- 253
Query: 314 TSIVSGYAISGRIREARELFNEMPE-RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+A +F+ E R++++WN+MLA Y + +EA M+
Sbjct: 254 --------------DAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGF 299
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR-SAR 431
+ D T +++ S GK +HG + + + +SN+L+ MY K +
Sbjct: 300 EPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEA 359
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
+ ++ + +D VSWN++LTG+++ G SE+A+ F M+ + + F +L +C+++
Sbjct: 360 LNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDL 419
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++L+ G+Q+H V+++ +E N +L+ +Y+KC +E A + F + I NS+I
Sbjct: 420 ATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLI 479
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ + RG+ AL++F LMK +K DHITF +L AC H G V+ F SM YGI
Sbjct: 480 FGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGI 539
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P++EHY CMI L R G + E + + MPF P + + + CR G L A
Sbjct: 540 PPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVAS 599
Query: 671 RLNELNP 677
L EL P
Sbjct: 600 HLLELEP 606
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 250/556 (44%), Gaps = 74/556 (13%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
+++ S +V VF + ++ Y KC ++DA +F + R+ +WNA++ Y Q
Sbjct: 119 GQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQ 178
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
G G L M GV + T+A +L + ++ Q+H IVK G + +
Sbjct: 179 VGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTV 238
Query: 181 ESSLVDAYGKCMVMTDARRMFDD-IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
++++ AY +C + DA R+FD I+ ++ V+WN ++ YLV +EA +F +M
Sbjct: 239 CNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLG 298
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
P +T+ + + A S +G +HG++IK E + SL MY+K
Sbjct: 299 FEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLK-------- 350
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ S + EA +F + ++ +SWN++L G+++S L ++
Sbjct: 351 ---------------------SHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSED 389
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL F MR ID +L C+ L+ +++G++VH + ++ + N FV+++L+
Sbjct: 390 ALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIF 449
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
MY KCG + AR F + + ++WN+++ GYA+ G+ + A+ F M+ +
Sbjct: 450 MYSKCGVIEDARKSF-DATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHI 508
Query: 479 TFETLLAACANISSLEQG---------------------------------KQIHCFVIR 505
TF +L AC++I +E+G + +
Sbjct: 509 TFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEA 568
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD------VIICNSMILGFCHNERG 559
+E + + L+ C +E A +V L+ ++ +SM F H R
Sbjct: 569 MPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSM---FGHLRRW 625
Query: 560 REALEVFGLMKKEGIK 575
E + LMK+ G+K
Sbjct: 626 NEKASIKRLMKERGVK 641
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 226/503 (44%), Gaps = 41/503 (8%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L +K G ++ ++++ Y KC + A +MF + ++AVSWN ++ ++ GN
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ A+ M R ++F + L + + G Q+H +++K+ +EG+ +L
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KC R + +A E+F + RN ++WN
Sbjct: 142 LDMYAKCER-------------------------------VEDAFEVFKSINIRNSVTWN 170
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
A+++GY + A + M +ID T +L + K+ +VH I ++
Sbjct: 171 ALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKH 230
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+S+ V NA++ Y +CG++ A F + RD V+WN++L Y Q EEA
Sbjct: 231 GLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQL 290
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ P +T+ ++++A S QGK +H VI+ E V +L+ +Y K
Sbjct: 291 FLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLK 350
Query: 525 CC--CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
++ A+ +F+ + D + NS++ GF + +AL+ F M+ + + DH F
Sbjct: 351 SHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFS 410
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L +C ++L Q + K G P +I +Y + G +++ + P
Sbjct: 411 AVLRSCSDLATLQLGQQ-VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPK 469
Query: 643 NPTVPMLRKIFDKCRKNGYATLG 665
+ ++ IF GYA G
Sbjct: 470 DSSIAWNSLIF------GYAQHG 486
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
++ ++L + HC I++ ++ ++ Y KC + A ++F E+S D + N
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL--LACIHEGNVKLALQFFDSMR 605
+MI GF + ALE MK+ G D +F IL +AC+ G V++ Q SM
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACV--GYVEVGQQ-VHSMM 126
Query: 606 CKYGIIPQLEHYECMIKLYCR 626
K G + ++ +Y +
Sbjct: 127 VKMGYEGNVFAGSALLDMYAK 147
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 189/642 (29%), Positives = 307/642 (47%), Gaps = 32/642 (4%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S EP Y LF+LC +A+ + + +P+ + L N + + G +
Sbjct: 90 SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWH 149
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F +MPERD SWN M+G Y + GF L+L+ M +G+ + T+ VLR+
Sbjct: 150 AWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGG 209
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ + +++H +++ GF V + ++LV Y KC + AR++FD + + +SWN +
Sbjct: 210 IPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAM 269
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + + + +F ML +++P T + A LS ++HG +K F
Sbjct: 270 IAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGF 329
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D SL +MY GR+ DA G+I F+
Sbjct: 330 AIDVAFCNSLIQMYTSLGRMGDA-------------------------GKI------FSR 358
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M ++ +SW AM++GY ++ +AL+ LM D VT+ L CA L + +G
Sbjct: 359 METKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVG 418
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H + + V+NALL+MY K ++ A I ++ +D VSW++++ G+
Sbjct: 419 IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKA-IEVFKFMAEKDVVSWSSMIAGFCF 477
Query: 456 RGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
+S EA+ F M +P+ TF L+ACA +L GK+IH +V+R
Sbjct: 478 NHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP 537
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC YA F S DV+ N M+ GF + G AL +F M + G
Sbjct: 538 NALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEH 597
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF +L AC G V + F M K+ I+P L+HY CM+ L R G + E +
Sbjct: 598 PDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYN 657
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+NRMP P + + + CR + + LGE AA+ + EL P
Sbjct: 658 LINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEP 699
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 191/451 (42%), Gaps = 42/451 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-N 135
V + N +E Y K ++D A +F M E+D SW++M+ + N L F M
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
H V N +T+ L + A L K++H +++ G + ++L+D Y KC +
Sbjct: 494 H--VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A F K+ VSWN+++ ++ G G A+ +F +M+ P TF L ACS
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611
Query: 256 FLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW 313
+G ++ H + K + + ++ + G+L +A L+++ P + + W
Sbjct: 612 RAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 671
Query: 314 TSIVSGYAISGRIREARELFNEMP---ERNVISWNAMLAG-YTRSLLWKEALDFVFLMRK 369
++++G I R E EL ++ E N ++++ +L YT + W + MR+
Sbjct: 672 GALLNGCRIH-RHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI----FVSNALLDMYRKCG 425
+ D G S +++ H F+ ++ I V + + + + CG
Sbjct: 731 KGLEQDN-----------GCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACG 779
Query: 426 NLRSARIWFYQMSQRRDK-VSWNAVLTGYARR--------GQSEEAMTSFSEMQWETRPS 476
F + DK VS + +L G++ R + S ++ ++ +
Sbjct: 780 --------FAPVESLEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSC 831
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNC 507
F+ + ++ KQ+HCF +C
Sbjct: 832 HVIFKAISEIVRREITVRDTKQLHCFKDGDC 862
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 175/582 (30%), Positives = 302/582 (51%), Gaps = 34/582 (5%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN L G +E F++MN + + +T VL + A +L + KQ+HG+ V
Sbjct: 872 WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAV 931
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
K G +V + +SLV+ Y K AR +F+D+++ + +SWN ++ + +E+V
Sbjct: 932 KSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVN 991
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F +L E ++P +FT A+ L ACS L I G+ I + G++ + +V
Sbjct: 992 LFIDLLHEGLKPDHFTLASVLRACSSL--------IDGLNISRQIHVHALKTGNIADSFV 1043
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
T+++ Y+ SG++ EA LF + ++ WNAM+ G
Sbjct: 1044 A----------------------TTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y K+AL+ L+ K+ + DQ+TL C L + GK++H + + S+
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM- 469
+ V++ +LDMY KCG++ +A I F +S D V+W ++++G G ++A+ + M
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAP-DDVAWTSMISGCVDNGNEDQALRIYHRMR 1200
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCL 528
Q P ++TF TL+ A + +++LEQG+Q+H VI+ +C V +LV++Y KC +
Sbjct: 1201 QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT-SLVDMYAKCGNI 1259
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
E A R+FK+ + ++ + N+M++G + EA+ +F MK GI+PD ++F GIL AC
Sbjct: 1260 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 1319
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
H G A ++ SM YGI P++EHY C++ R G ++E + + MPF + +
Sbjct: 1320 SHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASI 1379
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
R + CR G G+ A RL L P+ + + +N +
Sbjct: 1380 NRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIY 1421
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 156/563 (27%), Positives = 266/563 (47%), Gaps = 55/563 (9%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY-----TQNGFPGRTLELFL 132
FL N + Y KCG+L AR +FD PERD +WNA+LGAY + +G L LF
Sbjct: 657 FLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFR 716
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ S S ++T A VL+ L ++ +HG +K G +V + +LV+ Y KC
Sbjct: 717 LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 776
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA---N 249
M DAR +FD ++ ++ V WN++++ Y+ G KEA +F + R +RP F+ N
Sbjct: 777 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 836
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC-------GRLE------ 296
+ ++ + Q+ K+ D+ + + +C G +E
Sbjct: 837 GVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMN 896
Query: 297 ------DARGLL---------DQPD--------------ERNIISWTSIVSGYAISGRIR 327
DA LL D + + ++ S+V+ Y+ G
Sbjct: 897 GLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAY 956
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVC 386
ARE+FN+M ++ISWN+M++ +S L +E+++ F+ L+ + K D TL +L C
Sbjct: 957 FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKP-DHFTLASVLRAC 1015
Query: 387 AGLSE-IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+ L + + + +++H + ++ FV+ L+D+Y K G + A F Q D
Sbjct: 1016 SSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLF-QNKDDLDLAC 1074
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVI 504
WNA++ GY ++A+ FS + S + T T AC + L+QGKQIH I
Sbjct: 1075 WNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAI 1134
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ ++ ++++Y KC + A VF S+ D + SMI G N +AL
Sbjct: 1135 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 1194
Query: 565 VFGLMKKEGIKPDHITFHGILLA 587
++ M++ + PD TF ++ A
Sbjct: 1195 IYHRMRQSRVMPDEYTFATLIKA 1217
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 233/497 (46%), Gaps = 63/497 (12%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+LR++ L + K H IV G G+ L ++L+ Y KC ++ AR++FD ++
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 209 AVSWNVIVRRYLVA-----GNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYE 262
V+WN I+ Y + GN +E + F++LR + T A L C +
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGL-HLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
+HG IKI E D V G+L +Y KCGR+ DAR L D ER+++ W ++ GY
Sbjct: 746 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805
Query: 323 SGRIREARELFNEM------PER------------------------------------- 339
G +EA +LF+E P+
Sbjct: 806 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDD 865
Query: 340 --NVISWNAMLAGYTRSLLWK----EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+V WN L+ LW A++ M D D VTL ++L AG +++
Sbjct: 866 NPDVFCWNKKLS----ECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLE 921
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+GK+VHG ++ S++ V+N+L++MY K G AR F M + D +SWN++++
Sbjct: 922 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM-KHLDLISWNSMISSC 980
Query: 454 ARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACAN-ISSLEQGKQIHCFVIRNCYEIN 511
A+ EE++ F ++ E +P FT ++L AC++ I L +QIH ++ +
Sbjct: 981 AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIAD 1040
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
L++VY+K +E A +F+ LD+ N+M+ G+ G++ALE+F L+ K
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHK 1100
Query: 572 EGIKPDHITFHGILLAC 588
G K D IT AC
Sbjct: 1101 SGEKSDQITLATAAKAC 1117
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 152/294 (51%), Gaps = 4/294 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y K G +++A LF + D WNAM+ Y + LELF ++ S
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKS 1101
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G ++QIT A ++ + L KQ+H +K GF ++ + S ++D Y KC M +A
Sbjct: 1102 GEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA 1161
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F+ I + V+W ++ + GN +A+ ++ +M + + P +TFA + A S +
Sbjct: 1162 GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCV 1221
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G Q+H +IK+D D V SL +MY KCG +EDA L + + RNI W +++
Sbjct: 1222 TALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAML 1281
Query: 318 SGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLM 367
G A G EA LF M + +S+ +L+ + + L EA +++ M
Sbjct: 1282 VGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 1335
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ +A L + + A+ + R+L +N++ F+ ++ Y KCGN++DA
Sbjct: 1206 PDEYT-FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYR 1264
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEEL 157
LF +M R+ WNAML Q+G + LF M G+ +++++ +L + S L
Sbjct: 1265 LFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGL 1324
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+ LH + G + S LVDA G+ ++ +A ++ + + K + S N
Sbjct: 1325 TSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 1380
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 196/658 (29%), Positives = 326/658 (49%), Gaps = 39/658 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ ++ L + C ++ + + + L+ F P L N I Y K G+L A+
Sbjct: 59 PMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKD 118
Query: 99 LFDEMP---ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+F+ M +RD SW+AM+ + NG ++LF++ G+ N Y V+R+ +
Sbjct: 119 VFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSN 178
Query: 156 ELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWN 213
+GV + + G ++K G F +V + SL+D + K +A ++FD + N V+W
Sbjct: 179 SDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
+++ R + G +EA+ F M+ FT ++ AC+ L + G Q+H I+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRS 298
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D V SL +MY KC + G + + R++F
Sbjct: 299 GLADD--VECSLVDMYAKC----------------------------SADGSVDDCRKVF 328
Query: 334 NEMPERNVISWNAMLAGYTRSL-LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M + +V+SW A++ GY ++ L EA++ F ++ + + + T C +S+
Sbjct: 329 DRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSD 388
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++GK+V G + +SN VSN+++ M+ KC + AR F +S++ + VS+N L
Sbjct: 389 PRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEK-NLVSYNTFLD 447
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G R E A SE+ + E S FTF +LL+ AN+ SL +G+QIH V++
Sbjct: 448 GTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSC 507
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
N AL+ +Y+KC ++ A RVF + +VI SMI GF + LE F M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMT 567
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
KEG+KP+ +T+ IL AC H G V + F+SM + I P++EHY CM+ L CR G +
Sbjct: 568 KEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ +F+N MPF V + R CR + LG+ AAR++ E +P P + +N
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSN 685
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 189/392 (48%), Gaps = 49/392 (12%)
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ R+L AG+ + AV M R+ IRP++ TF++ L +C G +H +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEF 91
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLD---QPDERNIISWTSIVSGYAISGRIREAR 330
+ E D V+ SL +Y K G L A+ + + + +R+++SW+++++ + +GR +A
Sbjct: 92 EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+LF E E ++ + ++ C+
Sbjct: 152 KLFVEFLEMGLVP-------------------------------NDYCYTAVIRACSNSD 180
Query: 391 EIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGN-LRSARIWFYQMSQRRDKVSWNA 448
+ +G+ + GF+ + + S++ V +L+DM+ K N +A F +MS+ + V+W
Sbjct: 181 FVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE-LNVVTWTL 239
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++T + G EA+ F +M S KFT ++ +ACA + +L G+Q+H + IR+
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSG 299
Query: 508 YEINVVCRGALVEVYTKCCC---LEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREAL 563
+V C +LV++Y KC ++ +VF V+ ++I G+ N EA+
Sbjct: 300 LADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAI 357
Query: 564 EVFGLMKKEG-IKPDHITFHGILLACIHEGNV 594
+F M +G ++P+H TF AC GNV
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKAC---GNV 386
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 28/316 (8%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
ALD + R + +D VT +L C ++GK VH + + + + N+L+
Sbjct: 48 ALDL--MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLIS 105
Query: 420 MYRKCGNLRSARIWFYQMSQ--RRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPS 476
+Y K G+L A+ F M + +RD VSW+A++ + G+ +A+ F E ++ P+
Sbjct: 106 LYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPN 165
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKC-CCLEYAIRV 534
+ + ++ AC+N + G+ I F+++ + + VC G +L++++ K E A +V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + S L+V+ MI REA+ F M G + D T + AC N+
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 595 KLALQFFDSMRCKYGIIPQLEHYEC-MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
L Q S + G+ + EC ++ +Y + ++D RK+F
Sbjct: 286 SLGRQ-LHSWAIRSGLA---DDVECSLVDMYAKCSADGSVDD-------------CRKVF 328
Query: 654 DKCRKNGYATLGEWAA 669
D+ + + ++ W A
Sbjct: 329 DRMQDH---SVMSWTA 341
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 147/331 (44%), Gaps = 38/331 (11%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+ KC ++DAR F+ + E++ S+N L +N EL ++ + + T+
Sbjct: 418 FVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTF 477
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++L A L +Q+H ++K G N + ++L+ Y KC + A R+F + N
Sbjct: 478 ASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDN 537
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG--- 263
+N +SW ++ + G + + F +M +E ++P T+ L ACS + EG
Sbjct: 538 RNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 264 ----MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
+ H + K++ + ++ + G L DA ++ P + +++ W + +
Sbjct: 598 FNSMYEDHKIKPKMEH------YACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAG--------YTRSLLWKEALDFVFLMRKT 370
+ R+ EL ++ R ++ ++ Y + W+E+ + MR+
Sbjct: 652 ----ACRVHSNTEL-GKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTE----MRRK 702
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
K+ + V G G S I++G +VH F
Sbjct: 703 MKERNLVKEG-------GCSWIEVGDKVHKF 726
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 308/616 (50%), Gaps = 37/616 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF N + Y G DAR +FDEMP RD SWN+++ A NG + M
Sbjct: 147 VFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMR 206
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG+ N + +V+ + E + G +HGL++K G V L ++LVD YGK +
Sbjct: 207 SGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLES 266
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ R+F+ +Q KN VSWN + + AG ++ + MF M ++ P + T ++ L A
Sbjct: 267 SMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVD 326
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + G ++HG I+ E D + SL +MY K G LE
Sbjct: 327 LGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLE-------------------- 366
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+A +F + RNV+SWNAM+A ++ EA V M+K + +
Sbjct: 367 -----------KASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNS 415
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL +L C+ ++ +KMGK++H + IHR+ S++FVSNAL+D+Y KCG L A+ F
Sbjct: 416 FTLVNLLPACSRVASVKMGKQIHAWSIHRS-LMSDLFVSNALIDVYAKCGQLSVAQDIFD 474
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+ +D VS+N ++ GY++ E++ F +M+ +F L+ACAN+S+ +
Sbjct: 475 R--SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFK 532
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGK+IH ++R + +L+++YTK L A ++F + DV N+MILG+
Sbjct: 533 QGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYG 592
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ + A E+F LMK +G+ DH+++ +L AC H G V ++F M + I PQ
Sbjct: 593 MHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQ 651
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
HY CM+ L R G + E + + MPF + + CR +G L AA L E
Sbjct: 652 MHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFE 711
Query: 675 LNPWAPFQFKITTNRF 690
L P + + N +
Sbjct: 712 LKPEHSGYYTLLRNMY 727
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 260/563 (46%), Gaps = 57/563 (10%)
Query: 43 SLYAHLFQL--CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
SL+ H+ +L C + ++ R ++LV+ T + L + Y ++ AR +
Sbjct: 3 SLHEHVLRLHQCGGNSLLLR-RAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLIL 61
Query: 101 DEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS----- 153
P R + WN++ A G P L ++ M SGV + T+ L ++
Sbjct: 62 RHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVV 121
Query: 154 ------AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
A+ EL + GL++ F GN +LV Y DARR+FD++ +
Sbjct: 122 AEAEHPAKGAELHAAALRRGLLLADVFAGN-----TLVTFYAARGRAADARRVFDEMPAR 176
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQI 266
+ VSWN +V L G ++A M+R I P+N + + + AC G+ +
Sbjct: 177 DIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGI-PVNVASLVSVVPACGTERDEGFGLSV 235
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+++K + + +L +MY K G LE + + + E+N +SW S + +A +G
Sbjct: 236 HGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFH 295
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+ E+F M E V VTL +L
Sbjct: 296 EDVLEMFRVMSEHEVTP-------------------------------GSVTLSSLLPAL 324
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
L +GKEVHG+ R S+IF++N+L+DMY K G L A F + + R+ VSW
Sbjct: 325 VDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENI-EGRNVVSW 383
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIR 505
NA++ A+ G EA + EMQ P+ FT LL AC+ ++S++ GKQIH + I
Sbjct: 384 NAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIH 443
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
++ AL++VY KC L A +F S DV N++I+G+ ++ E+L +
Sbjct: 444 RSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDVSY-NTLIVGYSQSQCCFESLHL 502
Query: 566 FGLMKKEGIKPDHITFHGILLAC 588
F M+ GI+ D ++F G L AC
Sbjct: 503 FQQMRSAGIEYDAVSFMGCLSAC 525
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 235/477 (49%), Gaps = 44/477 (9%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSK-----AIVEARKLESNLVTFYPTPPVFLLNR 82
+ + G ++S PV+ + + C + + V L+S L + V L N
Sbjct: 199 RAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSV-----VNLGNA 253
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
++ YGK G+L+ + +F+ M E++ SWN+ LG + GF LE+F M+ V+
Sbjct: 254 LVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPG 313
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+T +++L + + + K++HG ++R ++ + +SL+D Y K + A +F+
Sbjct: 314 SVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFE 373
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+I+ +N VSWN ++ G EA + +M + P +FT N L ACS ++S
Sbjct: 374 NIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKM 433
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G QIH I D V +L ++Y KCG+L A+ + D+ E++ +S+ +++ GY+
Sbjct: 434 GKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQ 492
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
S E+ LF + MR + D V+
Sbjct: 493 SQCCFESLHLFQQ-------------------------------MRSAGIEYDAVSFMGC 521
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ CA LS K GKE+HG + R +++ F++N+LLD+Y K G L +A F +++ R+D
Sbjct: 522 LSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRIT-RKD 580
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
SWN ++ GY GQ + A F M+ + ++ +L+AC++ +++GK+
Sbjct: 581 VASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKK 637
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 223/479 (46%), Gaps = 40/479 (8%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMF--DDIQNKNAVSWNVIVRRYLVAGNGK 226
+V ++ L +L+ +Y + AR + ++ ++A WN + R AG
Sbjct: 29 LVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPS 88
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSS-----PYEGMQIHGVIIKIDFEGDDVV 281
EA+ ++ M+R +RP + TF AL A + P +G ++H ++
Sbjct: 89 EALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALR--------- 139
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
RGLL ++ + ++V+ YA GR +AR +F+EMP R++
Sbjct: 140 -----------------RGLL----LADVFAGNTLVTFYAARGRAADARRVFDEMPARDI 178
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN++++ + + ++A V M ++ ++ +L ++ C + G VHG
Sbjct: 179 VSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGL 238
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ S + + NAL+DMY K G+L S+ F M Q +++VSWN+ L +A G E+
Sbjct: 239 VLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGM-QEKNEVSWNSALGCFAHAGFHED 297
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ F M + E P T +LL A ++ GK++H + IR E ++ +L++
Sbjct: 298 VLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMD 357
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y K CLE A +F+ +V+ N+MI N EA + M+K G P+ T
Sbjct: 358 MYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFT 417
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
+L AC +VK+ Q + ++ L +I +Y + G + +D +R
Sbjct: 418 LVNLLPACSRVASVKMGKQ-IHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR 475
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 298/580 (51%), Gaps = 34/580 (5%)
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FDE+ WN ++ ++G ++ LF M SGV + T++ V +S + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+QLHG I+K GF + +SLV Y K + AR++FD++ ++ +SWN I+ Y
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ G ++ + +F +ML I T + C+ G +H + +K F +D
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+L +MY KCG L+ A+ + F EM +R
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAV-------------------------------FREMSDR 209
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V+S+ +M+AGY R L EA+ M + D T+ +LN CA + GK VH
Sbjct: 210 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 269
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+I ND +IFVSNAL+DMY KCG+++ A + F +M + +D +SWN ++ GY++ +
Sbjct: 270 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYA 328
Query: 460 EEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA++ F+ + E R P + T +L ACA++S+ ++G++IH +++RN Y + +
Sbjct: 329 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 388
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y KC L A +F + +S D++ MI G+ + G+EA+ +F M++ GI+ D
Sbjct: 389 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 448
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
I+F +L AC H G V +FF+ MR + I P +EHY C++ + R G + + F+
Sbjct: 449 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 508
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
MP P + + CR + L E A ++ EL P
Sbjct: 509 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 548
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 208/417 (49%), Gaps = 32/417 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y K +D AR +FDEM ERD SWN+++ Y NG + L +F+ M SG+
Sbjct: 83 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 142
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T +V A+ + + + +H + VK F ++L+D Y KC + A+ +
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F ++ +++ VS+ ++ Y G EAV +F +M E I P +T L C+
Sbjct: 203 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 262
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
EG ++H I + D D V +L +MY KCG +++A + + ++IISW +I+ GY
Sbjct: 263 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 322
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ + EA LFN + E S D+ T+
Sbjct: 323 SKNCYANEALSLFNLLLEEKRFS------------------------------PDERTVA 352
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L CA LS G+E+HG+I RN Y S+ V+N+L+DMY KCG L A + F ++
Sbjct: 353 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS- 411
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+D VSW ++ GY G +EA+ F++M Q + +F +LL AC++ +++G
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y++ A + CA + + E +++ + +F+ N ++ Y KCG++ +A
Sbjct: 244 PDVYTVTA-VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 302
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEEL 157
+F EM +D SWN ++G Y++N + L LF L + S ++ T A VL + A
Sbjct: 303 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 362
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+++HG I++ G+ + + +SLVD Y KC + A +FDDI +K+ VSW V++
Sbjct: 363 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 422
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-IKIDFE 276
Y + G GKEA+ +F +M + I +F + L+ACS EG + ++ + E
Sbjct: 423 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 482
Query: 277 GDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFN- 334
+ +M + G L A R + + P + W +++ G I ++ A ++
Sbjct: 483 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 542
Query: 335 --EMPERNVISWNAMLAGYTRSLLWKE 359
E+ N + M Y + W++
Sbjct: 543 VFELEPENTGYYVLMANIYAEAEKWEQ 569
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/615 (30%), Positives = 303/615 (49%), Gaps = 35/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF N + Y CG+ DAR +FDEMP RD SWN+++ ++ N + L M
Sbjct: 111 VFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMR 170
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SGV N + +V+ + E E G +HGL++K G V L ++LVD YGK +
Sbjct: 171 SGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEA 230
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ ++F+ + +N VSWN + +L AG + + +F M P + T ++ L A
Sbjct: 231 SMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVE 290
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G ++HG IK E D V SL +MY K G
Sbjct: 291 LGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGS---------------------- 328
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ +A +F ++ RNV+SWNAM+A ++ EA V M+K + +
Sbjct: 329 ---------LEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNS 379
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+TL +L C+ ++ +K GK++H + R ++F+SNAL+DMY KCG LR A+ F
Sbjct: 380 ITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-D 438
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+S+ +D VS+N ++ GY++ S E++ F ++ +F L AC N+SS +Q
Sbjct: 439 LSE-KDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQ 497
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IH ++R + L+ +YTK L+ A ++F DV N+MI+G+
Sbjct: 498 GKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGM 557
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + A +F LMK G+ DH+++ +L C H G V+ ++F M + + PQ
Sbjct: 558 HGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQM 616
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G + E + + MPF+ + + CR +G L ++AA L EL
Sbjct: 617 HYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFEL 676
Query: 676 NPWAPFQFKITTNRF 690
P + + N +
Sbjct: 677 KPEHSGYYSVLRNMY 691
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 241/515 (46%), Gaps = 40/515 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
Y +L +R L P R + WN++ A + P L ++ M SGVS +
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75
Query: 145 TYANVLRSSAEELELGVSK--QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
T+ L ++A + +K +LH ++ G +V ++LV Y C DARR+FD
Sbjct: 76 TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD 135
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPY 261
++ ++ VSWN +V +L +A M+R + P+N + + + AC
Sbjct: 136 EMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGV-PVNVASLVSVVPACGVEQEGG 194
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G+ +HG+++K + + +L +MY K G +E + + + ERN +SW S + +
Sbjct: 195 FGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFL 254
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G + LF M ER + +TL
Sbjct: 255 NAGLYGDVLALFRGMSERGFMP-------------------------------GSITLSS 283
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L L +G+EVHG+ + +IFV+N+L+DMY K G+L A F ++ + R
Sbjct: 284 LLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKI-EVR 342
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIH 500
+ VSWNA++ + G EA +MQ + P+ T LL AC+ ++SL+ GKQIH
Sbjct: 343 NVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIH 402
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ IR ++ AL+++Y KC L A +F S DV N++ILG+ +
Sbjct: 403 AWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDVSY-NTLILGYSQSPWSF 461
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E+L +F + GI+ D I+F G L AC + + K
Sbjct: 462 ESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFK 496
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 164/324 (50%), Gaps = 3/324 (0%)
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
++ + ++V+ YA G +AR +F+EMP R+V+SWN++++ + + ++ +A + M
Sbjct: 110 DVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMM 169
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
++ ++ +L ++ C E G VHG + + S + + NAL+DMY K G++
Sbjct: 170 RSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVE 229
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAAC 487
++ F M + R++VSWN+ + + G + + F M P T +LL A
Sbjct: 230 ASMKVFEGMPE-RNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPAL 288
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+ + G+++H + I+ E+++ +LV++Y K LE A VF++ +V+ N
Sbjct: 289 VELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWN 348
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI N EA + M+K+G P+ IT +L AC ++K Q + +
Sbjct: 349 AMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQ-IHAWSIR 407
Query: 608 YGIIPQLEHYECMIKLYCRYGYMK 631
G++ L +I +Y + G ++
Sbjct: 408 TGLMFDLFISNALIDMYAKCGQLR 431
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 191/392 (48%), Gaps = 10/392 (2%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N ++ Y K G+L+ A +F+++ R+ SWNAM+ QNG L + M
Sbjct: 313 IFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQK 372
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G N IT N+L + + L KQ+H ++ G ++ + ++L+D Y KC +
Sbjct: 373 DGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRL 432
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+ +FD + K+ VS+N ++ Y + E++ +F ++ I +F AL AC+
Sbjct: 433 AQSIFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTN 491
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
LSS +G +IHGV+++ + +L +Y K G L+ A + ++ E+++ SW ++
Sbjct: 492 LSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNM 551
Query: 317 VSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+ GY + G+I A LF+ M + V +S+ A+L+ + L + + M
Sbjct: 552 IMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNL 611
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ Q+ ++++ ++ E+ I + +N V ALL R GN+ A+
Sbjct: 612 EPQQMHYACMVDLLGRSGQLTESVEI---ILDMPFHANSDVWGALLGACRIHGNIELAQY 668
Query: 433 WFYQMSQRRDKVS--WNAVLTGYARRGQSEEA 462
+ + + + S ++ + YA G+ EA
Sbjct: 669 AADHLFELKPEHSGYYSVLRNMYAEAGRWNEA 700
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C + + + +++ LV + FL N + Y K G LD A +F+ + E+D SW
Sbjct: 489 CTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASW 548
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N M+ Y +G LF M GV+ + ++Y VL + HG +V+
Sbjct: 549 NNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCS-----------HGGLVE 597
Query: 172 RG--FCGNVILE---------SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRY 219
RG + +++ + + +VD G+ +T++ + D+ + N+ W ++
Sbjct: 598 RGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGAC 657
Query: 220 LVAGN 224
+ GN
Sbjct: 658 RIHGN 662
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 274/532 (51%), Gaps = 32/532 (6%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A+V+++ A+ L KQLH L++ G+ L + LV+ Y KC + A ++FD +
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+N VSW ++ EA+ F M P F F++A+ AC+ L S G Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H + +K + V +L +MY KCG + DA
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC--------------------------- 161
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
++F EMP ++ +SW AM+ GY++ ++EAL M IDQ L L C
Sbjct: 162 ----KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
L K G+ VH + + + S+IFV NAL DMY K G++ SA F S+ R+ VS+
Sbjct: 218 GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSY 277
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
++ GY Q E+ ++ F E++ + P++FTF +L+ ACAN ++LEQG Q+H V++
Sbjct: 278 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
++ + LV++Y KC LE+AI+ F E I NS++ F + G++A++
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKF 397
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M G+KP+ ITF +L C H G V+ L +F SM YG++P EHY C+I L
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 457
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G +KE ++F+NRMPF P CR +G +G+ AA +L +L P
Sbjct: 458 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEP 509
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 225/453 (49%), Gaps = 34/453 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
AH+ Q A +K + ++L + L+ TP FL N + Y KCG LD A LFD MP+
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
R+ SW AM+ +QN + F M G Q +++ +R+ A + + KQ+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L +K G + + S+L D Y KC M DA ++F+++ K+ VSW ++ Y G
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA++ F KM+ E++ + L AC L + G +H ++K+ FE D V +L
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDE-RNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
T+MY K G +E A + E RN++S+T ++ GY + +I + +F E
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE--------- 299
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+R+ + ++ T ++ CA + ++ G ++H + +
Sbjct: 300 ----------------------LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
++ + FVS+ L+DMY KCG L A F ++ + ++WN++++ + + G ++A+
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIK 396
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F M +P+ TF +LL C++ +E+G
Sbjct: 397 FFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 209/431 (48%), Gaps = 12/431 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ ++ + CAS +I +++ + F +F+ + + Y KCG + DA
Sbjct: 104 PTQFA-FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F+EMP +D SW AM+ Y++ G L F M V+ +Q + L +
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD-DIQNKNAVSWNVIVR 217
+ +H +VK GF ++ + ++L D Y K M A +F D + +N VS+ ++
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 282
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ ++ + +F ++ R+ I P FTF++ + AC+ ++ +G Q+H ++KI+F+
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 342
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V L +MY KCG LE A D+ + I+W S+VS + G ++A + F M
Sbjct: 343 DPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMV 402
Query: 338 ER----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEI 392
+R N I++ ++L G + + L +E LD+ + M KT + + ++++ +
Sbjct: 403 DRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 462
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
K KE FI+R + N F + L R G+ ++ ++ + K S VL
Sbjct: 463 KEAKE---FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 519
Query: 453 --YARRGQSEE 461
YA Q E+
Sbjct: 520 NIYANERQWED 530
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 13/237 (5%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L ++ A ++ GK++H + Y+ F++N L++MY KCG L A F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSL 493
M Q R+ VSW A+++G ++ + EA+ +F M+ P++F F + + ACA++ S+
Sbjct: 64 DTMPQ-RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E GKQ+HC ++ + L ++Y+KC + A +VF+E D + +MI G+
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHEGNVKLALQ 599
EAL F M E + D L AC +H VKL +
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 296/635 (46%), Gaps = 93/635 (14%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-----------FPGRT---------- 127
KCG +DDAR LFD MP+RD SWN M+GAY +G P R+
Sbjct: 53 KCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISG 112
Query: 128 ----------LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
LELF +M + G NQ T+ +VLR + + L KQ+H +K F N
Sbjct: 113 YCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN 172
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ + LVD Y KC + +A +F+ +K N V W +V Y G+G +A+ F M
Sbjct: 173 AFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
E I FTF + L AC +S+ G Q+HG I++ F + V +L +MY KCG L
Sbjct: 233 GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLS 292
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+AR +L+ + + +SW S++ G G EA LF M R++
Sbjct: 293 NARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHM--------------- 337
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
ID+ T +LN + + +++ VH I + + + V+NA
Sbjct: 338 ----------------KIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNA 381
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRP 475
L+DMY K G A F +M+ +D +SW +++TG G EEA+ F EM+ P
Sbjct: 382 LVDMYAKRGYFDYAFDVFEKMTD-KDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHP 440
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
+ +L+ACA ++ LE GKQ+H +++ ++ +LV +Y KC C+E A +VF
Sbjct: 441 DQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 500
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
DVI ++I+G+ N RGR+ H G V+
Sbjct: 501 DSMEIQDVITWTALIVGYAQNGRGRD----------------------------HAGLVE 532
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
+F SM YGI P EHY CMI L R G + E ++ +N+M P + + +
Sbjct: 533 HGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAA 592
Query: 656 CRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR +G LGE AA L EL P + + +N +
Sbjct: 593 CRVHGNVELGERAANNLFELEPKNAVPYVLLSNLY 627
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 213/418 (50%), Gaps = 33/418 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + ++C+ + + +++ ++ + F++ ++ Y KC + +A LF+ P
Sbjct: 141 WGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAP 200
Query: 105 E-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+ R+ W AM+ Y+QNG + +E F DM G+ NQ T+ ++L + G
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGA 260
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HG IV+ GF NV + S+LVD Y KC +++ARRM + ++ + VSWN ++ + G
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
G+EA+ +F M ++ FT+ + L SF+ M +H +I+K FE +V
Sbjct: 321 LGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNN 380
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY K G + A + ++ ++++ISWTS+V+G +G EA LF E
Sbjct: 381 ALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCE-------- 432
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
MR DQ+ + +L+ CA L+ ++ GK+VH
Sbjct: 433 -----------------------MRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFL 469
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
++ S++ V N+L+ MY KCG + A F M + +D ++W A++ GYA+ G+ +
Sbjct: 470 KSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM-EIQDVITWTALIVGYAQNGRGRD 526
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 138/269 (51%), Gaps = 7/269 (2%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + ++ Y KCG+L +AR + + M D SWN+M+ + G L LF M+
Sbjct: 275 VFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHL 334
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ ++ TY +VL + +++ + +H LIVK GF ++ ++LVD Y K
Sbjct: 335 RHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDY 394
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ + +K+ +SW +V + G+ +EA+ +F +M I P A L AC+
Sbjct: 395 AFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAE 454
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ G Q+H +K V SL MY KCG +EDA + D + +++I+WT++
Sbjct: 455 LTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTAL 514
Query: 317 VSGYAISGRIRE-------ARELFNEMPE 338
+ GYA +GR R+ R F M E
Sbjct: 515 IVGYAQNGRGRDHAGLVEHGRSYFQSMEE 543
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/678 (27%), Positives = 326/678 (48%), Gaps = 51/678 (7%)
Query: 20 PTPSKTL-TKTISGHLKSDEPV----------------SYSLYAHLFQLCASSKAIVEAR 62
PTPS ISGH +S + S +A + A+ KA VE +
Sbjct: 286 PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQ 345
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
++ + V VF+ + I Y KCG DA+ +FD E++ WNAML + QN
Sbjct: 346 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNE 405
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
P + +F M + ++ T+ ++L + + KQ+H + +K ++ + +
Sbjct: 406 LPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 465
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+ +D Y K + DA+ +F I K+++SWN + +EAV M +M I P
Sbjct: 466 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 525
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+ +F+ A+ ACS + + G QIH + IK + V SL ++Y K G +E
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE------ 579
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+R++F ++ +++ NA++AG+ ++ EA+
Sbjct: 580 -------------------------SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 614
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMY 421
+ K VT IL+ C+G +GK+VH + ++ + + +L +Y
Sbjct: 615 LFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIY 674
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTF 480
K L A +M ++ W A+++GYA+ G + ++ SF M+ R + TF
Sbjct: 675 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SS 539
++L AC+++++ GK+IH + ++ + AL+++Y+KC + + FKE +
Sbjct: 735 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 794
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D++ NSMI+GF N EAL +F M++ IKPD +TF G+L+AC H G +
Sbjct: 795 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 854
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
FF SMR YG+ P+L+HY C I L R G+++E ++ ++++PF P + CR +
Sbjct: 855 FFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 914
Query: 660 GYATLGEWAARRLNELNP 677
G+ AAR+L EL P
Sbjct: 915 KDEERGKIAARKLVELEP 932
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/645 (24%), Positives = 279/645 (43%), Gaps = 81/645 (12%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C+ + R++ ++V + VF ++ Y KCG++ +AR +FD +
Sbjct: 162 AVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC 221
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
D W++M+ Y + G L LF M+ G + +Q+T ++ + A L
Sbjct: 222 PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL------ 275
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
A + + + V+WN ++ + +G
Sbjct: 276 -----------------------------DHATALLKKMPTPSTVAWNAVISGHAQSGLE 306
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ ++ M + P TFA+ L A + + + EG Q+H + + + V SL
Sbjct: 307 FNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSL 366
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y KCG DA+ + D E+NI+ W N
Sbjct: 367 INLYAKCGCPSDAKNVFDLSCEKNIVMW-------------------------------N 395
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AML G+ ++ L +EA+ M + T D+ T IL C LS +GK+VH +N
Sbjct: 396 AMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN 455
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++FV+NA LDMY K G + A+ F + +D +SWNA+ G A+ + EEA+
Sbjct: 456 CMDISLFVANATLDMYSKYGAIGDAKALF-SLIPYKDSISWNALTVGLAQNLEEEEAVCM 514
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
M+ P +F T + AC+NI + E GKQIHC I+ N +L+++Y+K
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK 574
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+E + ++F + + ++ N++I GF N EA+++F + K+G+KP +TF I
Sbjct: 575 HGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSI 634
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE--LED---FVNR 639
L C N + Q + C Y + + + + ++ + Y+K LED +
Sbjct: 635 LSGCSGSLNSAIGKQ----VHC-YTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 689
Query: 640 MPFNPTVPMLRKIFDKCRKNGY---ATLGEWAARRLNELNPWAPF 681
MP + + I +NGY + + W R N + A F
Sbjct: 690 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 256/570 (44%), Gaps = 76/570 (13%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSAN 142
+E Y K G + A ER G+ +++L + ++G PG L F + +G +
Sbjct: 98 VELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPD 157
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
Q A VL + + L +Q+H +VK GF +V E++LVD Y KC + +ARR+FD
Sbjct: 158 QFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD 217
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I + + W+ ++ Y G +EA+ +F +M + P
Sbjct: 218 GIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP-------------------- 257
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
D V L ++ GRL+ A LL + + ++W +++SG+A
Sbjct: 258 ---------------DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQ 302
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
SG L+ +M SW LW + T +
Sbjct: 303 SGLEFNVLGLYKDMR-----SWG----------LWPT----------------RSTFASM 331
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ A + G+++H + +N+FV ++L+++Y KCG A+ F +S ++
Sbjct: 332 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKN 390
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
V WNA+LTG+ + EEA+ F M++ + +FTF ++L AC +SS GKQ+HC
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+NC +I++ A +++Y+K + A +F D I N++ +G N E
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYE 618
A+ + M+ GI PD ++F + AC N++ A + + C KYGI
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINAC---SNIR-ATETGKQIHCLAIKYGICSNHAVGS 566
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+I LY ++G ++ ++ + VP+
Sbjct: 567 SLIDLYSKHGDVESSRKIFAQVDASSIVPI 596
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ +HG I R + ++L+++Y K G + A +R + +++L+ +AR
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHAR 134
Query: 456 RGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G + + +F ++ RP +F +L+AC+ + L G+Q+HC V+++ + +V
Sbjct: 135 SGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 194
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG--REALEVFGLMKK 571
C ALV++Y KC + A RVF + D I +SMI C++ G +EAL +F M K
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIA--CYHRVGCYQEALALFSRMDK 252
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
G PD +T I+ G + A M
Sbjct: 253 MGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD- 373
S+V Y SGR+ A ER + +++L+ + RS + L +R T
Sbjct: 96 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
DQ L ++L+ C+ + + G++VH + ++ +SS++F AL+DMY KCG++ +AR
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 215
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F ++ D + W++++ Y R G +EA+ FS M + + P + T T+++ A+
Sbjct: 216 FDGIAC-PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274
Query: 493 LEQGKQI 499
L+ +
Sbjct: 275 LDHATAL 281
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 274/532 (51%), Gaps = 32/532 (6%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A+V+++ A+ L KQLH L++ G+ L + LV+ Y KC + A ++FD +
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+N VSW ++ EA+ F M P F F++A+ AC+ L S G Q+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H + +K + V +L +MY KCG + DA
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC--------------------------- 161
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
++F EMP ++ +SW AM+ GY++ ++EAL M IDQ L L C
Sbjct: 162 ----KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
L K G+ VH + + + S+IFV NAL DMY K G++ SA F S+ R+ VS+
Sbjct: 218 GALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSY 277
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
++ GY Q E+ ++ F E++ + P++FTF +L+ ACAN ++LEQG Q+H V++
Sbjct: 278 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
++ + LV++Y KC LE AI+ F E I NS++ F + G++A+++
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKI 397
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M G+KP+ ITF +L C H G V+ L +F SM YG++P EHY C+I L
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 457
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G +KE ++F+NRMPF P CR +G +G+ AA +L +L P
Sbjct: 458 RAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEP 509
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 225/453 (49%), Gaps = 34/453 (7%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
AH+ Q A +K + ++L + L+ TP FL N + Y KCG LD A LFD MP+
Sbjct: 9 AHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ 68
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
R+ SW AM+ +QN + F M G Q +++ +R+ A + + KQ+
Sbjct: 69 RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L +K G + + S+L D Y KC M DA ++F+++ K+ VSW ++ Y G
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA++ F KM+ E++ + L AC L + G +H ++K+ FE D V +L
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDE-RNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
T+MY K G +E A + E RN++S+T ++ GY + +I + +F E
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE--------- 299
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+R+ + ++ T ++ CA + ++ G ++H + +
Sbjct: 300 ----------------------LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
++ + FVS+ L+DMY KCG L A F ++ + ++WN++++ + + G ++A+
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIK 396
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F M +P+ TF +LL C++ +E+G
Sbjct: 397 IFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 210/431 (48%), Gaps = 12/431 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ ++ + CAS +I +++ + F +F+ + + Y KCG + DA
Sbjct: 104 PTQFA-FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 162
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F+EMP +D SW AM+ Y++ G L F M V+ +Q + L +
Sbjct: 163 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 222
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD-DIQNKNAVSWNVIVR 217
+ +H +VK GF ++ + ++L D Y K M A +F D + +N VS+ ++
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 282
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ ++ + +F ++ R+ I P FTF++ + AC+ ++ +G Q+H ++KI+F+
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 342
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V L +MY KCG LE A D+ + I+W S+VS + G ++A ++F M
Sbjct: 343 DPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV 402
Query: 338 ER----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEI 392
+R N I++ ++L G + + L +E LD+ + M KT + + ++++ +
Sbjct: 403 DRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 462
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
K KE FI+R + N F + L R G+ ++ ++ + K S VL
Sbjct: 463 KEAKE---FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 519
Query: 453 --YARRGQSEE 461
YA Q E+
Sbjct: 520 NIYANERQWED 530
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 114/237 (48%), Gaps = 13/237 (5%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L ++ A ++ GK++H + Y+ F++N L++MY KCG L A F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSL 493
M Q R+ VSW A+++G ++ + EA+ +F M+ P++F F + + ACA++ S+
Sbjct: 64 DTMPQ-RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E GKQ+HC ++ + L ++Y+KC + A +VF+E D + +MI G+
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHEGNVKLALQ 599
EAL F M E + D L AC +H VKL +
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 239
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/584 (30%), Positives = 303/584 (51%), Gaps = 36/584 (6%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+WN L + Q G ++ F+DM +S V+ + +T+ +L A L + KQ+HG++
Sbjct: 873 AWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIV 932
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
V+ G V + + L++ Y K ++ AR +F + + VSWN ++ ++G + +V
Sbjct: 933 VRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSV 992
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSP-YEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
MF +LR + P FT A+ L ACS L + QIH +K VVL S
Sbjct: 993 GMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAG-----VVLDSFVS- 1046
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
T+++ Y+ SG++ EA LF ++ SWNAM+
Sbjct: 1047 -------------------------TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMM 1081
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY S + +AL LM+++ + +Q+TL GL +K GK++ + + ++
Sbjct: 1082 HGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFN 1141
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++FV + +LDMY KCG + SAR F ++ D V+W +++G GQ E A+ ++
Sbjct: 1142 LDLFVISGVLDMYLKCGEMESARRIFNEIPSP-DDVAWTTMISGCVENGQEEHALFTYHH 1200
Query: 469 MQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCC 526
M+ + +P ++TF TL+ AC+ +++LEQG+QIH ++ NC + +LV++Y KC
Sbjct: 1201 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNC-AFDPFVMTSLVDMYAKCG 1259
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
+E A +FK +++ + N+MI+G + EAL+ F MK G+ PD +TF G+L
Sbjct: 1260 NIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLS 1319
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G V A + F SM+ YGI P++EHY C++ R G ++E E ++ MPF +
Sbjct: 1320 ACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASA 1379
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
M R + + CR G+ A +L L P + + +N +
Sbjct: 1380 SMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVY 1423
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 205/411 (49%), Gaps = 40/411 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y K G++ AR +F +M E D SWN M+ +G ++ +F+D+ G+ +Q
Sbjct: 948 INMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQ 1007
Query: 144 ITYANVLRSSAEELELG----VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
T A+VLR+ + LG ++ Q+H +K G + + ++L+D Y K M +A
Sbjct: 1008 FTVASVLRACSS---LGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEF 1064
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F + + SWN ++ Y+V+G+ +A+ ++ M R T ANA A L
Sbjct: 1065 LFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVG 1124
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G QI V++K F D V+ + +MY+KCG +E AR + ++ + ++WT+++SG
Sbjct: 1125 LKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISG 1184
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+G +E LF MR + D+ T
Sbjct: 1185 CVENG--QEEHALFT-----------------------------YHHMRLSKVQPDEYTF 1213
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ C+ L+ ++ G+++H + + + + FV +L+DMY KCGN+ AR F + +
Sbjct: 1214 ATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNT 1273
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
R SWNA++ G A+ G +EEA+ F EM+ P + TF +L+AC++
Sbjct: 1274 SR-IASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSH 1323
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 162/296 (54%), Gaps = 4/296 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y K G +++A LF D SWNAM+ Y +G + L L++ M S
Sbjct: 1044 FVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQES 1103
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G ANQIT AN +++ + L KQ+ ++VKRGF ++ + S ++D Y KC M A
Sbjct: 1104 GERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESA 1163
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+F++I + + V+W ++ + G + A+ + M ++P +TFA + ACS L
Sbjct: 1164 RRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLL 1223
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G QIH +K++ D V+ SL +MY KCG +EDARGL + + I SW +++
Sbjct: 1224 TALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMI 1283
Query: 318 SGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
G A G EA + F EM R V +++ +L+ + S L EA + + M+K
Sbjct: 1284 VGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQK 1339
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/571 (26%), Positives = 239/571 (41%), Gaps = 74/571 (12%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A +F++C S + A L V VF+ + Y K G + +AR LFD M
Sbjct: 731 APVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGL 790
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY---ANVLRSSAEELELGVS 162
RD WN M+ AY G L LF + N +G+ + +T A V++S LE +
Sbjct: 791 RDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQL- 849
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQL AYG + M D D+ ++WN + +L
Sbjct: 850 KQL--------------------KAYGTKLFMYDDDDDGSDV-----IAWNKTLSWFLQR 884
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G EAV F M+ + TF L + L+ G QIHG++++ + V
Sbjct: 885 GETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVG 944
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
L MYVK G + AR + Q +E +++SW +++SG A+SG + +F ++ ++
Sbjct: 945 NCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLL 1004
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL-SEIKMGKEVHGF 401
DQ T+ +L C+ L + ++H
Sbjct: 1005 P-------------------------------DQFTVASVLRACSSLGGGCHLATQIHAC 1033
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + FVS L+D+Y K G + A F D SWNA++ GY G +
Sbjct: 1034 AMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDG-FDLASWNAMMHGYIVSGDFPK 1092
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ + MQ R ++ T A + L+QGKQI V++ + +++ +++
Sbjct: 1093 ALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLD 1152
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC +E A R+F E S D + +MI G N + AL + M+ ++PD T
Sbjct: 1153 MYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYT 1212
Query: 581 FHGILLAC-----------IHEGNVKLALQF 600
F ++ AC IH VKL F
Sbjct: 1213 FATLVKACSLLTALEQGRQIHANTVKLNCAF 1243
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/584 (24%), Positives = 264/584 (45%), Gaps = 60/584 (10%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN- 206
++LR + +L + K+ H I+ G + L ++L+ Y KC ++ AR++FD +
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690
Query: 207 -KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ V+WN I+ + A ++ +F + R + T A C +SP
Sbjct: 691 SRDLVTWNAILSAH--ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAES 748
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG +KI + D V G+L +Y K GR+ +AR L D R+++ W ++ Y +G
Sbjct: 749 LHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGL 808
Query: 326 IREARELFNEM------PE----------------------------------------- 338
EA LF+E P+
Sbjct: 809 EYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDG 868
Query: 339 RNVISWNAMLAGY-TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+VI+WN L+ + R W EA+D M + D +T ++L+V AGL+ +++GK+
Sbjct: 869 SDVIAWNKTLSWFLQRGETW-EAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + R+ + V N L++MY K G++ AR F+QM++ D VSWN +++G A G
Sbjct: 928 IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNE-VDLVSWNTMISGCALSG 986
Query: 458 QSEEAMTSFSE-MQWETRPSKFTFETLLAACANI-SSLEQGKQIHCFVIRNCYEINVVCR 515
E ++ F + ++ P +FT ++L AC+++ QIH ++ ++
Sbjct: 987 LEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
L++VY+K +E A +F D+ N+M+ G+ + +AL ++ LM++ G +
Sbjct: 1047 TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGER 1106
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
+ IT A +K Q ++ K G L ++ +Y + G M+
Sbjct: 1107 ANQITLANAAKAAGGLVGLKQGKQ-IQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARR 1165
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYA--TLGEWAARRLNELNP 677
N +P +P + C +NG L + RL+++ P
Sbjct: 1166 IFNEIP-SPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQP 1208
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 30/261 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+++ ++ Y KCG ++ AR +F+E+P D +W M+ +NG L + M
Sbjct: 1144 LFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRL 1203
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V ++ T+A ++++ + L +Q+H VK + + +SLVD Y KC + D
Sbjct: 1204 SKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIED 1263
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +F SWN ++ GN +EA+ F +M + P TF L ACS
Sbjct: 1264 ARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSH 1323
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G ++E Y ++ G+ E I ++ +
Sbjct: 1324 -------------------------SGLVSEAYENFYSMQKIYGI-----EPEIEHYSCL 1353
Query: 317 VSGYAISGRIREARELFNEMP 337
V + +GRIREA ++ + MP
Sbjct: 1354 VDALSRAGRIREAEKVISSMP 1374
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+ +A L + C+ A+ + R++ +N V F++ ++ Y KCGN++DAR
Sbjct: 1207 QPDEYT-FATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1265
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
GLF SWNAM+ Q+G L+ F +M GV+ +++T+ VL +
Sbjct: 1266 GLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSA 1320
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 299/556 (53%), Gaps = 12/556 (2%)
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD--AYGKCMVMTDARRM 200
Q Y N+L + KQ+H LI+K G V ++S L+ A ++ A +
Sbjct: 28 QHPYLNLLEKCKN---INTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSL 84
Query: 201 FDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
F++ Q N WN ++R Y ++ + ++ +F +ML ++P + TF +C+
Sbjct: 85 FEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKA 144
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ +EG Q+H +K+ + V S+ MY G ++ AR + D+ R+ +S+T+++
Sbjct: 145 KATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALI 204
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+GY G + +AR LF+E+P ++V+SWNAM++GY +S ++EA+ + M++ ++
Sbjct: 205 TGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKS 264
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ ++L+ C ++GK + ++ N + SN+ ++NAL+DMY KCG AR F +
Sbjct: 265 TMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGI 324
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +D +SWN ++ GY+ EEA+ F M + +P+ TF +L ACA + +L+ G
Sbjct: 325 -EEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLG 383
Query: 497 KQIHCFVIRNCY-EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
K +H ++ +N N +L+++Y KC C+E A RVF+ S ++ N+M+ GF
Sbjct: 384 KWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAM 443
Query: 556 NERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ AL +F M +G+ +PD ITF G+L AC G V L Q+F SM YGI P+L
Sbjct: 444 HGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKL 503
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+HY CMI L R +E E + M P + + C+ +G GE+ A RL +
Sbjct: 504 QHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQ 563
Query: 675 LNPWAPFQFKITTNRF 690
L P F + +N +
Sbjct: 564 LEPENAGAFVLLSNIY 579
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 151/527 (28%), Positives = 232/527 (44%), Gaps = 80/527 (15%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLF-QLCASSKAIVEARKLESNLVT 70
+L SSP P+ I L + +P L H + L K I +++ S ++
Sbjct: 2 LLVTSSPSPS--------ILHFLPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIK 53
Query: 71 FYPTPPVFLLNRAIE--CYGKCGNLDDARGLFDEMPERDGGS---WNAMLGAYTQNGFPG 125
VF+ ++ I G+L A LF+E + + WN+++ Y+ + P
Sbjct: 54 TGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPL 113
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN-------- 177
+L LF M + GV N T+ + +S + KQLH +K N
Sbjct: 114 SSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVI 173
Query: 178 --------------VILESSLVDAYGKCMVMT---------DARRMFDDIQNKNAVSWNV 214
V +SSL DA ++T DARR+FD+I K+ VSWN
Sbjct: 174 HMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNA 233
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y+ +G +EA+V F++M ++ P T L AC S G I +
Sbjct: 234 MISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG 293
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
F + + +L +MY KCG + AR L D +E+++ISW +++ GY+ EA LF
Sbjct: 294 FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFE 353
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
M +R K D LG IL+ CA L + +
Sbjct: 354 VM------------------------------LRSNVKPNDVTFLG-ILHACACLGALDL 382
Query: 395 GKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
GK VH +I +N SSN + +L+DMY KCG + +A F M R+ SWNA+L+G+
Sbjct: 383 GKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM-HSRNLASWNAMLSGF 441
Query: 454 ARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQ 498
A G +E A+ FSEM + RP TF +L+AC ++ G Q
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQ 488
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 20/274 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N I+ Y KCG D AR LFD + E+D SWN M+G Y+ L LF M S
Sbjct: 300 LTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSN 359
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDA 197
V N +T+ +L + A L + K +H I K N L +SL+D Y KC + A
Sbjct: 360 VKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAA 419
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSF 256
R+F + ++N SWN ++ + + G+ + A+ +F +M+ + + RP + TF L AC+
Sbjct: 420 ERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQ 479
Query: 257 -----LSSPY--EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD-ER 308
L Y +Q +G+ K+ G + ++ + + E+A L+ + E
Sbjct: 480 AGLVDLGHQYFRSMIQDYGISPKLQH------YGCMIDLLARAEKFEEAEILMKNMEMEP 533
Query: 309 NIISWTSIVSGYAISGRIR----EARELFNEMPE 338
+ W S++S GR+ A LF PE
Sbjct: 534 DGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPE 567
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 181/604 (29%), Positives = 305/604 (50%), Gaps = 37/604 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + I+ Y G + DA+ LFDE+P RD WN ML Y +NG L F +M +
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V N +++ +L A + QLHGL+++ GF + + ++++ Y KC + D
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++FD + + V+WN ++ Y+ G EAV +F M+ ++ + TFA+ L +
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S ++H I++ D + +L ++Y K G +E A Q ++ T++
Sbjct: 392 SGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGY ++G EA LF + + ++ +
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVP-------------------------------NC 480
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T+ +L CA L+ +K+GKE+H I + + V +++ MY K G L A +F +
Sbjct: 481 LTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRR 540
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF---TFETLLAACANISSL 493
M + D V WN ++ +++ G+ E A+ F +M T +KF + L+ACAN +L
Sbjct: 541 MPVK-DSVCWNLMIVSFSQNGKPELAIDLFRQMG--TSGTKFDSVSLSATLSACANYPAL 597
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
GK++HCFV+RN + + L+++Y+KC L A VF + + NS+I +
Sbjct: 598 YYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAY 657
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
++ R RE L++F M + GI+PDH+TF I+ AC H G V + +F M +YGI +
Sbjct: 658 GNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICAR 717
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+EH+ CM+ LY R G + E D + MPF P + CR +G L + A++ L
Sbjct: 718 MEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLV 777
Query: 674 ELNP 677
EL+P
Sbjct: 778 ELDP 781
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/564 (29%), Positives = 258/564 (45%), Gaps = 73/564 (12%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLD 94
+P S S + L +CA+ + IV A LV F P V N I Y KCGNL
Sbjct: 275 KPNSVS-FVCLLSVCAT-RGIVRAGIQLHGLVIRSGFESDPTV--ANTIITMYSKCGNLF 330
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DAR +FD MP+ D +WN ++ Y QNGF + LF M SGV + IT+A+ L S
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVL 390
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+ L K++H IV+ G +V L+S+LVD Y K + A + F +
Sbjct: 391 KSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTA 450
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y++ G EA+ +F +++E + P T A+ L AC+ L+S G ++H I+K
Sbjct: 451 MISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKG 510
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E V S+T MY K GRL+ A + F
Sbjct: 511 LENVCQVGSSITYMYAKSGRLD-------------------------------LAYQFFR 539
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
MP ++ + WN M+ ++++ + A+D M + D V+L L+ CA +
Sbjct: 540 RMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYY 599
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GKE+H F+ RN + S+ FV++ L+DMY KCG L AR F M +++VSWN+++ Y
Sbjct: 600 GKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF-DMMDWKNEVSWNSIIAAYG 658
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G+ E + F EM + +P TF +++AC + +++G
Sbjct: 659 NHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIY--------------- 703
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
Y +C EY I + ++ C + G R E F +K
Sbjct: 704 --------YFRCMTEEYGI-----CARMEHFACMVDLYG-----RAGRLHEAFDTIKSMP 745
Query: 574 IKPDHITFHGILLACIHEGNVKLA 597
PD T+ +L AC GNV+LA
Sbjct: 746 FTPDAGTWGSLLGACRLHGNVELA 769
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 243/530 (45%), Gaps = 33/530 (6%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ R++ + ++ + L +R + Y C + D LF + WN ++ ++
Sbjct: 94 QVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFS 153
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G L F M S V+ ++ T+ V+++ + + K +H L GF ++
Sbjct: 154 MLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLF 213
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ SSL+ Y + DA+ +FD++ ++ + WNV++ Y+ G+ A+ F +M
Sbjct: 214 IGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSC 273
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
++P + +F L C+ G+Q+HG++I+ FE D V ++ MY KCG L DAR
Sbjct: 274 VKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDAR 333
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D + + ++W +++GY +G EA LF M V
Sbjct: 334 KIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGV------------------ 375
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
+D +T L +K KEVH +I R+ ++++ +AL+D
Sbjct: 376 -------------KLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVD 422
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKF 478
+Y K G++ A F Q + D A+++GY G + EA+ F + E P+
Sbjct: 423 IYFKGGDVEMACKTF-QQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCL 481
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T ++L ACA ++SL+ GK++HC +++ E ++ +Y K L+ A + F+
Sbjct: 482 TMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRM 541
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
D + N MI+ F N + A+++F M G K D ++ L AC
Sbjct: 542 PVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSAC 591
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 2/277 (0%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y + ++ LF + + WN ++ G++ + AL F F M + D+ T
Sbjct: 121 YVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTF 180
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ C GL+ + + K VH + ++F+ ++L+ +Y G + A+ F ++
Sbjct: 181 PYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPV 240
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD + WN +L GY + G A+ +F EM+ +P+ +F LL+ CA + G Q
Sbjct: 241 -RDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQ 299
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H VIR+ +E + ++ +Y+KC L A ++F D + N +I G+ N
Sbjct: 300 LHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGF 359
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
EA+ +F M G+K D ITF L + + G++K
Sbjct: 360 TDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++H + + ++ + + +L MY C + + F ++ Q + WN ++ G++
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRL-QLCYSLPWNWLIRGFSM 154
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G + A+ F M P K+TF ++ AC ++++ K +H + +++
Sbjct: 155 LGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFI 214
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+L+++YT + A +F E D I+ N M+ G+ N AL F M+ +
Sbjct: 215 GSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCV 274
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFD-SMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
KP+ ++F +L C G V+ +Q +R + P + + +I +Y + G + +
Sbjct: 275 KPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIITMYSKCGNLFDA 332
Query: 634 EDFVNRMPFNPTV 646
+ MP TV
Sbjct: 333 RKIFDIMPQTDTV 345
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/678 (27%), Positives = 326/678 (48%), Gaps = 51/678 (7%)
Query: 20 PTPSKTL-TKTISGHLKSDEPV----------------SYSLYAHLFQLCASSKAIVEAR 62
PTPS ISGH +S + S +A + A+ KA VE +
Sbjct: 296 PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQ 355
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
++ + V VF+ + I Y KCG DA+ +FD E++ WNAML + QN
Sbjct: 356 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNE 415
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
P + +F M + ++ T+ ++L + + KQ+H + +K ++ + +
Sbjct: 416 LPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 475
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+ +D Y K + DA+ +F I K+++SWN + +EAV M +M I P
Sbjct: 476 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 535
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+ +F+ A+ ACS + + G QIH + IK + V SL ++Y K G +E
Sbjct: 536 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE------ 589
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+R++F ++ +++ NA++AG+ ++ EA+
Sbjct: 590 -------------------------SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 624
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMY 421
+ K VT IL+ C+G +GK+VH + ++ + + +L +Y
Sbjct: 625 LFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIY 684
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTF 480
K L A +M ++ W A+++GYA+ G + ++ SF M+ R + TF
Sbjct: 685 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 744
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SS 539
++L AC+++++ GK+IH + ++ + AL+++Y+KC + + FKE +
Sbjct: 745 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 804
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D++ NSMI+GF N EAL +F M++ IKPD +TF G+L+AC H G +
Sbjct: 805 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 864
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
FF SMR YG+ P+L+HY C I L R G+++E ++ ++++PF P + CR +
Sbjct: 865 FFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 924
Query: 660 GYATLGEWAARRLNELNP 677
G+ AAR+L EL P
Sbjct: 925 KDEERGKIAARKLVELEP 942
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/643 (25%), Positives = 275/643 (42%), Gaps = 77/643 (11%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C+ + R++ ++V + VF ++ Y KCG++ +AR +FD +
Sbjct: 172 AVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC 231
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
D W++M+ Y + G L LF M+ G + +Q+T ++ + A L
Sbjct: 232 PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL------ 285
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
A + + + V+WN ++ + +G
Sbjct: 286 -----------------------------DHATALLKKMPTPSTVAWNAVISGHAQSGLE 316
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ ++ M + P TFA+ L A + + + EG Q+H + + + V SL
Sbjct: 317 FNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSL 376
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y KCG DA+ + D E+NI+ W N
Sbjct: 377 INLYAKCGCPSDAKNVFDLSCEKNIVMW-------------------------------N 405
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AML G+ ++ L +EA+ M + T D+ T IL C LS +GK+VH +N
Sbjct: 406 AMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN 465
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++FV+NA LDMY K G + A+ F + +D +SWNA+ G A+ + EEA+
Sbjct: 466 CMDISLFVANATLDMYSKYGAIGDAKALF-SLIPYKDSISWNALTVGLAQNLEEEEAVCM 524
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
M+ P +F T + AC+NI + E GKQIHC I+ N +L+++Y+K
Sbjct: 525 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK 584
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+E + ++F + + ++ N++I GF N EA+++F + K+G+KP +TF I
Sbjct: 585 HGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSI 644
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED---FVNRMP 641
L C N + Q K G++ + + L Y K LED + MP
Sbjct: 645 LSGCSGSLNSAIGKQVH-CYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 701
Query: 642 FNPTVPMLRKIFDKCRKNGY---ATLGEWAARRLNELNPWAPF 681
+ + I +NGY + + W R N + A F
Sbjct: 702 DHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 744
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 256/570 (44%), Gaps = 76/570 (13%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSAN 142
+E Y K G + A ER G+ +++L + ++G PG L F + +G +
Sbjct: 108 VELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPD 167
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
Q A VL + + L +Q+H +VK GF +V E++LVD Y KC + +ARR+FD
Sbjct: 168 QFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD 227
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I + + W+ ++ Y G +EA+ +F +M + P
Sbjct: 228 GIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP-------------------- 267
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
D V L ++ GRL+ A LL + + ++W +++SG+A
Sbjct: 268 ---------------DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQ 312
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
SG L+ +M SW LW + T +
Sbjct: 313 SGLEFNVLGLYKDMR-----SWG----------LWPT----------------RSTFASM 341
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ A + G+++H + +N+FV ++L+++Y KCG A+ F +S ++
Sbjct: 342 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKN 400
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
V WNA+LTG+ + EEA+ F M++ + +FTF ++L AC +SS GKQ+HC
Sbjct: 401 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 460
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+NC +I++ A +++Y+K + A +F D I N++ +G N E
Sbjct: 461 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 520
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYE 618
A+ + M+ GI PD ++F + AC N++ A + + C KYGI
Sbjct: 521 AVCMLKRMRLHGITPDDVSFSTAINAC---SNIR-ATETGKQIHCLAIKYGICSNHAVGS 576
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+I LY ++G ++ ++ + VP+
Sbjct: 577 SLIDLYSKHGDVESSRKIFAQVDASSIVPI 606
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ +HG I R + ++L+++Y K G + A +R + +++L+ +AR
Sbjct: 86 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHAR 144
Query: 456 RGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G + + +F ++ RP +F +L+AC+ + L G+Q+HC V+++ + +V
Sbjct: 145 SGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 204
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG--REALEVFGLMKK 571
C ALV++Y KC + A RVF + D I +SMI C++ G +EAL +F M K
Sbjct: 205 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIA--CYHRVGCYQEALALFSRMDK 262
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
G PD +T I+ G + A M
Sbjct: 263 MGSAPDQVTLVTIISTLASSGRLDHATALLKKM 295
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD- 373
S+V Y SGR+ A ER + +++L+ + RS + L +R T
Sbjct: 106 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 165
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
DQ L ++L+ C+ + + G++VH + ++ +SS++F AL+DMY KCG++ +AR
Sbjct: 166 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 225
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F ++ D + W++++ Y R G +EA+ FS M + + P + T T+++ A+
Sbjct: 226 FDGIAC-PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 284
Query: 493 LEQGKQI 499
L+ +
Sbjct: 285 LDHATAL 291
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/565 (30%), Positives = 290/565 (51%), Gaps = 42/565 (7%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G+ A++ +++ + + L ++LH ++ GF ++ LE++L+ Y KC
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DA+R+F+ ++ K+ +W+ I+ Y AG G+ AVV++ +M+ E + P TFA AL
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ ++ +G IH I+ DDV+ SL MY+KC DE
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC-------------DE------ 161
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK- 372
+ EAR++F M RNV S+ AM++ Y ++ EAL+ M K
Sbjct: 162 ------------MVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAI 209
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ + T IL GL ++ G++VH + + +N+ V NAL+ MY KCG+ AR
Sbjct: 210 EPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARK 269
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
F M+ R + +SW +++ YA+ G +EA+ F M E PS +F + L ACA + +
Sbjct: 270 VFDSMTAR-NVISWTSMIAAYAQHGNPQEALNLFKRMDVE--PSGVSFSSALNACALLGA 326
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L++G++IH V+ + + +L+ +Y +C L+ A RVF + D CN+MI
Sbjct: 327 LDEGREIHHRVV-EAHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAA 385
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F + R ++AL ++ M++EGI D ITF +L+AC H V FF S+ +G++P
Sbjct: 386 FTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVP 445
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+EHY CM+ + R G + + E+ V MP+ + C+++G GE AAR++
Sbjct: 446 LVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKV 505
Query: 673 NELNPWAPFQFKITTN------RFD 691
EL P + +N RFD
Sbjct: 506 FELAPAETLPYVFLSNMYAAAKRFD 530
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 223/450 (49%), Gaps = 46/450 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C +A+ E R+L +L+ + L ++ Y KCG+LDDA+ +F+ M +D
Sbjct: 16 LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W++++ AY + G + L+ M GV N +T+A L A L + +H
Sbjct: 76 LFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQ 135
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+ + +L+ SL++ Y KC M +AR++F+ ++ +N S+ ++ Y+ AG E
Sbjct: 136 RILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAE 195
Query: 228 AVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A+ +F +M + E I P +TFA L A L + +G ++H + F+ + VV +L
Sbjct: 196 ALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALV 255
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY KCG +AR + D RN+ISWTS+++ YA G +EA LF M
Sbjct: 256 TMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---------- 305
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQ--VTLGLILNVCAGLSEIKMGKEVHGFIHR 404
D++ V+ LN CA L + G+E+H HR
Sbjct: 306 --------------------------DVEPSGVSFSSALNACALLGALDEGREIH---HR 336
Query: 405 --NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ ++ + +LL MY +CG+L AR F +M + RD S NA++ + + G+ ++A
Sbjct: 337 VVEAHLASPQMETSLLSMYARCGSLDDARRVFNRM-KTRDAFSCNAMIAAFTQHGRKKQA 395
Query: 463 MTSFSEMQWETRPSK-FTFETLLAACANIS 491
+ + M+ E P+ TF ++L AC++ S
Sbjct: 396 LRIYRRMEQEGIPADGITFVSVLVACSHTS 425
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP S ++ CA A+ E R++ +V + P + + Y +CG+LDDAR
Sbjct: 308 EPSGVS-FSSALNACALLGALDEGREIHHRVVEAHLASPQ-METSLLSMYARCGSLDDAR 365
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEE 156
+F+ M RD S NAM+ A+TQ+G + L ++ M G+ A+ IT+ +VL + S
Sbjct: 366 RVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTS 425
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVI 215
L L++ G V +VD G+ + DA + + + +AV+W +
Sbjct: 426 LVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTL 485
Query: 216 V---RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+ +R+ G+ A F++ + P + F + ++A +
Sbjct: 486 LSGCKRHGDLNRGERAARKVFELAPAETLP--YVFLSNMYAAA 526
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 298/570 (52%), Gaps = 11/570 (1%)
Query: 130 LFLDMNHSGVSANQITY--ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
L L + S VS + + + A++L + + L Q+H V G + L LV
Sbjct: 29 LRLQSSPSAVSGDVVLHSAASLLSACVDVLAFVPGLQIHAHCVSSGVEYHSALVPKLVTF 88
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y + +A+ + ++ + + WNV++ Y +E V + +M+ + IRP FT+
Sbjct: 89 YSAFNLHREAQSINENSDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTY 148
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+ L AC G +HG I ++ V +L MY + G + AR L D E
Sbjct: 149 PSVLKACGETLDVASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSE 208
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDF 363
R+ +SW ++++ YA G EA ELF++M E +VI+WN + GY + + AL
Sbjct: 209 RDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGL 268
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYR 422
+ MR +D V + + L C+ + I++GKE+HG IHR+ Y V N L+ MY
Sbjct: 269 ISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHRS-YDGIDNVRNTLITMYS 327
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFE 481
KC +LR+A I F Q ++ +WN++++GYA+ +SEEA EM +P+ T
Sbjct: 328 KCDDLRNAFIVF-QKTEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLA 386
Query: 482 TLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
++L CA I++L+ GK+ HC+++R C++ + +LV+VY K + A +V S
Sbjct: 387 SILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSE 446
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+D + S+I G+ + GR AL +F M + GIKPD +T +L AC H V +
Sbjct: 447 IDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRL 506
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F M+ KYGI P L+H+ CM+ LY R G++ + +D ++RMP+ P+ + + C +G
Sbjct: 507 FMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHG 566
Query: 661 YATLGEWAARRLNELNPWAPFQFKITTNRF 690
+G+WAA +L E+ P P + + N +
Sbjct: 567 NTEIGKWAAEKLLEMKPENPGYYVLIANMY 596
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 141/575 (24%), Positives = 250/575 (43%), Gaps = 102/575 (17%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
++AH C SS + L LVTFY F L+R + ++++ + +
Sbjct: 66 IHAH----CVSS-GVEYHSALVPKLVTFYSA---FNLHREAQ------SINENSDILHPL 111
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P WN ++ +Y +N + + M G+ + TY +VL++ E L++ +
Sbjct: 112 P------WNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGR 165
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+HG I + ++ + ++L+ Y + + ARR+FD + ++AVSWN ++ Y G
Sbjct: 166 VVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVG 225
Query: 224 NGKEAVVMFFKMLREDI----------------------------RPLNF-------TFA 248
EA +F KM + R NF
Sbjct: 226 MWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMI 285
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L ACS + + G +IHG+ I ++G D V +L MY KC L +A + + +E
Sbjct: 286 IGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEEN 345
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
++ +W SI+SGYA + EA L EM +LAG+ +
Sbjct: 346 SLCTWNSIISGYAQVNKSEEASYLLREM----------LLAGFQPNF------------- 382
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNL 427
+TL IL +CA ++ ++ GKE H +I R + + N+L+D+Y K G +
Sbjct: 383 --------ITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 434
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAA 486
+A+ MS+ D+V++ +++ GY +G+ A+ F EM + +P T +L+A
Sbjct: 435 VAAKQVSNLMSE-IDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMVAVLSA 493
Query: 487 CANISSLEQGKQIHC-----FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
C++ + +G+++ + IR C + + C +V++Y + L A +
Sbjct: 494 CSHSKLVHEGQRLFMKMQPKYGIRPCLQ-HFSC---MVDLYGRAGFLAKAKDIIHRMPYE 549
Query: 542 DVIICNSMILGFCH----NERGREALEVFGLMKKE 572
+ +L CH E G+ A E MK E
Sbjct: 550 PSGATWATLLNACHIHGNTEIGKWAAEKLLEMKPE 584
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 197/478 (41%), Gaps = 69/478 (14%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + + R + ++ +++ N I Y + GN+ AR LFD M
Sbjct: 148 YPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMS 207
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV--------------- 149
ERD SWNA++ Y G ELF M SGV + IT+ +
Sbjct: 208 ERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALG 267
Query: 150 ----LRSSAEELE----------------LGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+R+ L+ + + K++HGL + R + G + ++L+ Y
Sbjct: 268 LISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYS 327
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + +A +F + + +WN I+ Y +EA + +ML +P T A+
Sbjct: 328 KCDDLRNAFIVFQKTEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLAS 387
Query: 250 ALFACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L C+ +++ G + H I++ F+ ++ SL ++Y K G++ A+ + + E
Sbjct: 388 ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEI 447
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ +++TS++ GY G R A LF+EM +R
Sbjct: 448 DEVTYTSLIDGYGNQGEGRVALALFDEM------------------------------IR 477
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH-RNDYSSNIFVSNALLDMYRKCGNL 427
K D VT+ +L+ C+ + G+ + + + + + ++D+Y + G L
Sbjct: 478 SGIKP-DPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAGFL 536
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
A+ ++M +W +L G +E + +E E +P + L+A
Sbjct: 537 AKAKDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWA-AEKLLEMKPENPGYYVLIA 593
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 313/613 (51%), Gaps = 45/613 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+ + G +D A+ +F +M +R+ + N ++ + ++F +M V N +
Sbjct: 396 FARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESL 454
Query: 147 ANVLRSSAEELELGVSK----QLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMF 201
+L + E L K ++H + + G + + ++LV+ YGKC + +A +F
Sbjct: 455 VVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVF 514
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ +K+ VSWN ++ +EAV F M R + P NF+ + L +CS L
Sbjct: 515 QLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLT 574
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G QIHG K + D V +L +Y A
Sbjct: 575 LGRQIHGEGFKWGLDLDVSVSNALLTLY-------------------------------A 603
Query: 322 ISGRIREARELFNEMPERNVISWNAM---LAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+ I E +++F +MPE + +SWN+ LA Y S+L +AL + M + ++VT
Sbjct: 604 ETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVL--QALKYFLEMMQAGWRPNRVT 661
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
IL + S + +G ++H I + + + + NALL Y KC + I F +MS
Sbjct: 662 FINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMS 721
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISSLEQGK 497
+RRD+VSWN++++GY G +AM + MQ + FTF T+L+ACA++++LE+G
Sbjct: 722 ERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGM 781
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
++H +R C E +VV ALV++Y KC ++YA R F+ ++ NSMI G+ +
Sbjct: 782 EVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHG 841
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
G++AL++F MK+ G PDH+TF G+L AC H G V + F SM YG+ P++EH+
Sbjct: 842 HGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHF 901
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEWAARRLNEL 675
CM+ L R G +K++EDF+ MP +P + + R + CR NG T LG+ AA+ L EL
Sbjct: 902 SCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIEL 961
Query: 676 NPWAPFQFKITTN 688
P + + +N
Sbjct: 962 EPQNAVNYVLLSN 974
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 167/606 (27%), Positives = 287/606 (47%), Gaps = 46/606 (7%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F +S ++ +A L L T VF N I Y + GNL AR LFDEMP+++
Sbjct: 147 FDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNL 206
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV--SKQLH 166
SW+ ++ YTQN P LF + SG+ N + LR+ + G+ Q+H
Sbjct: 207 VSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIH 266
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
I K ++IL + L+ Y C + DA R+FD+I+ +N+V+WN I+ Y G+
Sbjct: 267 AFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDA 326
Query: 226 KEAVVMFFKMLRE----DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
A +F M E ++RP +T + + A L+ D
Sbjct: 327 VSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLA--------------------DCG 366
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L L +M R+E + G L R++ +++V+G+A G + A+ +F +M +RN
Sbjct: 367 LVLLEQMLT---RIEKS-GFL-----RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNA 417
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK----E 397
++ N ++ G R +EA VF K +I+ +L ++L+ S +K GK E
Sbjct: 418 VTMNGLMVGLARQHQGEEAAK-VFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQE 476
Query: 398 VHGFIHRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
VH ++ R+ + I + NAL++MY KC + +A +Q+ +D VSWN++++G
Sbjct: 477 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNA-CSVFQLMPSKDTVSWNSMISGLDHN 535
Query: 457 GQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
+ EEA++ F M+ PS F+ + L++C+++ L G+QIH + +++V
Sbjct: 536 ERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVS 595
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG-REALEVFGLMKKEGI 574
AL+ +Y + + +VF + D + NS I E +AL+ F M + G
Sbjct: 596 NALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGW 655
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+P+ +TF IL A + L Q ++ KY + ++ Y + M++ E
Sbjct: 656 RPNRVTFINILAAVSSFSVLGLGHQ-IHALILKYSVADDNAIENALLAFYGKCEQMEDCE 714
Query: 635 DFVNRM 640
+RM
Sbjct: 715 IIFSRM 720
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 206/421 (48%), Gaps = 39/421 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + YGKC +D+A +F MP +D SWN+M+ N + F M +G+
Sbjct: 495 NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMV 554
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ + + L S + L + +Q+HG K G +V + ++L+ Y + + + +++
Sbjct: 555 PSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKV 614
Query: 201 FDDIQNKNAVSWNVIV---RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
F + + VSWN + +Y + +A+ F +M++ RP TF N L A S
Sbjct: 615 FFQMPEYDQVSWNSFIGALAKY--EASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSF 672
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNIISWTSI 316
S G QIH +I+K D+ + +L Y KC ++ED + + E R+ +SW S+
Sbjct: 673 SVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSM 732
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGY SG + +A+D V+ M + + +D
Sbjct: 733 ISGYLHSG-------------------------------ILHKAMDLVWPMMQRGQKLDG 761
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T +L+ CA ++ ++ G EVH R S++ V +AL+DMY KCG + A F++
Sbjct: 762 FTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASR-FFE 820
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+ R+ SWN++++GYAR G ++A+ F+ M Q P TF +L+AC+++ +++
Sbjct: 821 LMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDE 880
Query: 496 G 496
G
Sbjct: 881 G 881
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 229/493 (46%), Gaps = 45/493 (9%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+ LH + K GF +V ++L++ Y + + AR++FD++ KN VSW+ ++ Y
Sbjct: 159 ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 218
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP--YEGMQIHGVIIKIDFEGDD 279
EA +F ++ + P +F +AL AC S GMQIH I K+ D
Sbjct: 219 NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDM 278
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
++ L MY C SG I +A +F+E+ R
Sbjct: 279 ILSNVLMSMYSDC------------------------------SGSIDDAHRVFDEIKFR 308
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID----QVTLGLILNVCAGLSE--IK 393
N ++WN++++ Y R A +M+ +++ + TL ++ L++ +
Sbjct: 309 NSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLV 368
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ +++ I ++ + +++V +AL++ + + G + A++ F QM R + V+ N ++ G
Sbjct: 369 LLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDR-NAVTMNGLMVGL 427
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGK----QIHCFVIRN-CY 508
AR+ Q EEA F EM+ + + LL+ S+L++GK ++H ++ R+
Sbjct: 428 ARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLV 487
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ + ALV +Y KC ++ A VF+ S D + NSMI G HNER EA+ F
Sbjct: 488 DARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHT 547
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
MK+ G+ P + + L +C G + L Q K+G+ + ++ LY
Sbjct: 548 MKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGE-GFKWGLDLDVSVSNALLTLYAETD 606
Query: 629 YMKELEDFVNRMP 641
+ E + +MP
Sbjct: 607 SINECQKVFFQMP 619
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 212/457 (46%), Gaps = 48/457 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++S+ + L C+S + R++ + V + N + Y + ++++ +
Sbjct: 555 PSNFSVISTLSS-CSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQK 613
Query: 99 LFDEMPERDGGSWNAMLGAYTQ-NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F +MPE D SWN+ +GA + + L+ FL+M +G N++T+ N+L + +
Sbjct: 614 VFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFS 673
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIV 216
LG+ Q+H LI+K + +E++L+ YGKC M D +F + + ++ VSWN ++
Sbjct: 674 VLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMI 733
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
YL +G +A+ + + M++ + FTFA L AC+ +++ GM++H ++ E
Sbjct: 734 SGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLE 793
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV +L +MY KCG+++ A + RNI SW S++SGYA G ++A ++F M
Sbjct: 794 SDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRM 853
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA-------GL 389
+ + D VT +L+ C+ G
Sbjct: 854 KQHG-------------------------------QSPDHVTFVGVLSACSHVGLVDEGY 882
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
K EV+G R ++ S ++D+ + G+++ + M + + W V
Sbjct: 883 KHFKSMGEVYGLSPRIEHFS------CMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTV 936
Query: 450 LTGYAR-RGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
L R G++ E ++M E P LL+
Sbjct: 937 LGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLS 973
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 152/339 (44%), Gaps = 37/339 (10%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + YGKC ++D +F M ER D SWN+M+ Y +G + ++L M G
Sbjct: 698 NALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQ 757
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ T+A VL + A L ++H V+ +V++ S+LVD Y KC + A R
Sbjct: 758 KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASR 817
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
F+ + +N SWN ++ Y G+G++A+ +F +M + P + TF L ACS +
Sbjct: 818 FFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGL 877
Query: 260 PYEGM-------QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDER 308
EG +++G+ +I+ + M GR D + + D P +
Sbjct: 878 VDEGYKHFKSMGEVYGLSPRIE---------HFSCMVDLLGRAGDVKKIEDFIKTMPMDP 928
Query: 309 NIISWTSIVSGYA-ISGRIRE----ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
NI+ W +++ +GR E A ++ E+ +N +++ + + W++ ++
Sbjct: 929 NILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEA 988
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
MRK D AG S + M VH F+
Sbjct: 989 RLAMRKAAVKKD-----------AGCSWVNMKDGVHLFV 1016
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 295/599 (49%), Gaps = 34/599 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGV 139
N ++ K +L DAR LFD++P+RD SW ++ Y + L LF M S +
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ + L++ L LHG VK G +V + S+L+D Y K + + +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD++ +NAV+W ++ + AG + + F M R + ++ +A AL A + +
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G IH +K F+ + V SLT MY KCG+L+ + +++SWT+IV+
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y G+ + F M NVI ++ T
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIP-------------------------------NEYTF 321
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+++ CA + +K G+++H + + + + V+N+++ +Y KCG L S F M +
Sbjct: 322 SAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSM-K 380
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD ++W+ ++ Y++ G EEA S M+ E +P++F ++L+ C +++ LEQGKQ
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H V+ E + AL+ +Y KC + A ++F +S D+I +MI G+ +
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
+EA+E+F ++K G++PD +TF G+L AC H G V L +F+SM Y I P EHY
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L CR G + + E + MP + + CR +G G+ AA + +L+P
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDP 619
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 194/421 (46%), Gaps = 33/421 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + ++ Y K G + + +FDEMP R+ +W A++ + G+ L F M
Sbjct: 151 VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V + YA L++SA+ L + +H +K+GF N + +SL Y KC +
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
F ++ + VSW IV Y+ G + F +M ++ P +TF+ + C+
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G Q+H ++ + F V S+ +Y KCG L + R+II+W++I
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTI 390
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y+ GY +EA +++ MR ++
Sbjct: 391 IAAYS--------------------------QVGYG-----EEAFEYLSRMRSEGPKPNE 419
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
L +L+VC ++ ++ GK++H + V +AL+ MY KCG++ A F
Sbjct: 420 FALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD 479
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
S + D +SW A+++GYA G S+EA+ F +Q RP TF +L AC++ ++
Sbjct: 480 -SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL 538
Query: 496 G 496
G
Sbjct: 539 G 539
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 44/419 (10%)
Query: 40 VSYSLYAHLFQLCAS--SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
V Y YA+ L AS S A+ R + + + F+ N Y KCG LD
Sbjct: 213 VEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGL 272
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
F +M D SW ++ AY Q G L+ F M S V N+ T++ V+ A
Sbjct: 273 HTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFA 332
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L +QLH ++ GF + + +S++ Y KC + ++F ++ ++ ++W+ I+
Sbjct: 333 RLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIA 392
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G G+EA +M E +P F A+ L C ++ +G Q+H ++ + E
Sbjct: 393 AYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQ 452
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+V +L MY KCG + +A + + +IISWT+++SGYA G +EA ELF
Sbjct: 453 TSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFEN-- 510
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++K D VT +L C+ + +
Sbjct: 511 -----------------------------IQKVGLRPDSVTFIGVLTACSHAGMVDL--- 538
Query: 398 VHGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
GF + N S + ++ + ++D+ + G L A M + D V W+ +L
Sbjct: 539 --GFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLL 595
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 20/342 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ A + CA+ + +L ++++ + + N + Y KCG L
Sbjct: 316 PNEYTFSA-VISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M RD +W+ ++ AY+Q G+ E M G N+ A+VL
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQLH ++ G ++ S+L+ Y KC + +A ++F D + +SW ++
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G+ +EA+ +F + + +RP + TF L ACS + GM G D
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACS-----HAGMVDLGFYYFNSMSKD 549
Query: 279 DVVL------GSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI----R 327
+ G + ++ + GRL DA L+ P + + + W++++ I G + R
Sbjct: 550 YHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQR 609
Query: 328 EARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMR 368
A E+ P N + LA + WKEA + LM+
Sbjct: 610 AAAEVLKLDP--NCAGTHITLANIFAAKGKWKEAANIRMLMK 649
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 295/599 (49%), Gaps = 34/599 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGV 139
N ++ K +L DAR LFD++P+RD SW ++ Y + L LF M S +
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ + L++ L LHG VK G +V + S+L+D Y K + + +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD++ +NAV+W ++ + AG + + F M R + ++ +A AL A + +
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGA 232
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G IH +K F+ + V SLT MY KCG+L+ + +++SWT+IV+
Sbjct: 233 LNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y G+ + F M NVI ++ T
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIP-------------------------------NEYTF 321
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+++ CA + +K G+++H + + + + V+N+++ +Y KCG L S F M +
Sbjct: 322 SAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSM-K 380
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD ++W+ ++ Y++ G EEA S M+ E +P++F ++L+ C +++ LEQGKQ
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H V+ E + AL+ +Y KC + A ++F +S D+I +MI G+ +
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
+EA+E+F ++K G++PD +TF G+L AC H G V L +F+SM Y I P EHY
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L CR G + + E + MP + + CR +G G+ AA + +L+P
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDP 619
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 194/421 (46%), Gaps = 33/421 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + ++ Y K G + + +FDEMP R+ +W A++ + G+ L F M
Sbjct: 151 VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V + YA L++SA+ L + +H +K+GF N + +SL Y KC +
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
F ++ + VSW IV Y+ G + F +M ++ P +TF+ + C+
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G Q+H ++ + F V S+ +Y KCG L + R+II+W++I
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTI 390
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y+ GY +EA +++ MR ++
Sbjct: 391 IAAYS--------------------------QVGYG-----EEAFEYLSRMRSEGPKPNE 419
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
L +L+VC ++ ++ GK++H + V +AL+ MY KCG++ A F
Sbjct: 420 FALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD 479
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
S + D +SW A+++GYA G S+EA+ F +Q RP TF +L AC++ ++
Sbjct: 480 -SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDL 538
Query: 496 G 496
G
Sbjct: 539 G 539
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 44/419 (10%)
Query: 40 VSYSLYAHLFQLCAS--SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
V Y YA+ L AS S A+ R + + + F+ N Y KCG LD
Sbjct: 213 VEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGL 272
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
F +M D SW ++ AY Q G L+ F M S V N+ T++ V+ A
Sbjct: 273 HTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFA 332
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L +QLH ++ GF + + +S++ Y KC + ++F ++ ++ ++W+ I+
Sbjct: 333 RLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIA 392
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G G+EA +M E +P F A+ L C ++ +G Q+H ++ + E
Sbjct: 393 AYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQ 452
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+V +L MY KCG + +A + + +IISWT+++SGYA G +EA ELF
Sbjct: 453 TSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFEN-- 510
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++K D VT +L C+ + +
Sbjct: 511 -----------------------------IQKVGLRPDSVTFIGVLTACSHAGMVDL--- 538
Query: 398 VHGFIHRNDYSSNIFVSNA------LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
GF + N S + ++ + ++D+ + G L A M + D V W+ +L
Sbjct: 539 --GFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLL 595
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 20/342 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ A + CA+ + +L ++++ + + N + Y KCG L
Sbjct: 316 PNEYTFSA-VISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M RD +W+ ++ AY+Q G+ E M G N+ A+VL
Sbjct: 375 VFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAI 434
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQLH ++ G ++ S+L+ Y KC + +A ++F D + +SW ++
Sbjct: 435 LEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISG 494
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G+ +EA+ +F + + +RP + TF L ACS + GM G D
Sbjct: 495 YAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACS-----HAGMVDLGFYYFNSMSKD 549
Query: 279 DVVL------GSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI----R 327
+ G + ++ + GRL DA L+ P + + + W++++ I G + R
Sbjct: 550 YHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQR 609
Query: 328 EARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMR 368
A E+ P N + LA + WKEA + LM+
Sbjct: 610 AAAEVLKLDP--NCAGTHITLANIFAAKGKWKEAANIRMLMK 649
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/598 (29%), Positives = 308/598 (51%), Gaps = 34/598 (5%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
L RA+ Y + G + +A LF+ M + D WN M+ + NG ++ + M GV
Sbjct: 63 LTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGV 122
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ TY V+++ +L +++HG ++K G ++ + +SL+ Y K + A
Sbjct: 123 RGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEM 182
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F ++ ++ VSWN ++ Y+ G+G ++ F +M I+ F+ L ACS
Sbjct: 183 VFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGF 242
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G +IH +++ E D +V SL +MY KC
Sbjct: 243 LRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKC--------------------------- 275
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK-DIDQVT 378
GR+ A LF+++ ++++++WNAM+ GY+ + E+ +V M++ K D +T
Sbjct: 276 ----GRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWIT 331
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ +L CA L I +GK VHGF RN + ++ + AL+DMY +CG L+ A F QM+
Sbjct: 332 MINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMN 391
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
+R + +SWNA++ Y + G++ +AMT F ++ +T +P T ++L A A ++SL + +
Sbjct: 392 ER-NLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAE 450
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
QIH +V + + N ++V +Y KC L A +F + DVI N++I+ + +
Sbjct: 451 QIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHG 510
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
GR ++E+F M+++G +P+ TF +LL+C G V ++F+SM+ Y I P +EHY
Sbjct: 511 FGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHY 570
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
C++ L R G + ++F+ MP PT + + R G L E AA + L
Sbjct: 571 GCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSL 628
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 245/497 (49%), Gaps = 37/497 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + E ++ ++ +++ N I Y K G ++ A +F EMP
Sbjct: 129 YPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMP 188
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SWN+M+ Y G R+L F +M SG+ ++ + +L + + E L K+
Sbjct: 189 VRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKE 248
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++ +V++++SLVD Y KC M A R+FD I +K+ V+WN ++ Y +
Sbjct: 249 IHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQ 308
Query: 225 GKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
E+ KM + P T N L C+ L + G +HG I+ F V+
Sbjct: 309 SFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLET 368
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY +CG+L+ A L Q +ERN+ISW ++++ Y +G R+A LF +
Sbjct: 369 ALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQD-------- 420
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
L KT K D T+ IL A L+ ++ +++HG++
Sbjct: 421 ----------------------LCNKTLKP-DATTIASILPAYAELASLREAEQIHGYVT 457
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ SN FVSN+++ MY KCGNL AR F +M+ +D +SWN V+ YA G ++
Sbjct: 458 KLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMT-FKDVISWNTVIMAYAIHGFGRISI 516
Query: 464 TSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN--VVCRGALVE 520
FSEM+ + P+ TF +LL +C+ + +G + + R+ Y IN + G +++
Sbjct: 517 ELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRD-YNINPGIEHYGCILD 575
Query: 521 VYTKCCCLEYAIRVFKE 537
+ + L++A +E
Sbjct: 576 LIGRTGNLDHAKNFIEE 592
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 231/493 (46%), Gaps = 51/493 (10%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
SK+ +V+R N + + + +Y + M +A +F++++ + WNV++R ++
Sbjct: 48 SKRNQSFLVER----NSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVD 103
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +AV + +M +R NFT+ + AC L EG ++HG +IK + D +
Sbjct: 104 NGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYI 163
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY K G +E A + + R+++SW S++SGY G + F EM +
Sbjct: 164 GNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGI 223
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+D+ ++ IL C+ ++ GKE+H
Sbjct: 224 -------------------------------KLDRFSVIGILGACSLEGFLRNGKEIHCQ 252
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ R+ ++ V +L+DMY KCG + A F Q++ + V+WNA++ GY+ QS E
Sbjct: 253 MMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITD-KSIVAWNAMIGGYSLNAQSFE 311
Query: 462 AMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+ +MQ + P T LL CA + ++ GK +H F IRN + ++V ALV
Sbjct: 312 SFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALV 371
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y +C L+ A +F + + ++I N+MI + N R+A+ +F + + +KPD
Sbjct: 372 DMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDAT 431
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH------YECMIKLYCRYGYMKEL 633
T IL A +++ A Q +G + +L+ ++ +Y + G +
Sbjct: 432 TIASILPAYAELASLREAEQI-------HGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRA 484
Query: 634 EDFVNRMPFNPTV 646
+ +RM F +
Sbjct: 485 REIFDRMTFKDVI 497
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 185/359 (51%), Gaps = 6/359 (1%)
Query: 286 TEMYVKCGRLEDARGLLDQP--DERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
T++ +K + AR +Q ERN +S T +S Y G ++ A +LF M + +
Sbjct: 34 TDLILKPRIFKTARSKRNQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFI 93
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN M+ G+ + L+ +A+DF M D T ++ C GL ++ G+ VHG +
Sbjct: 94 WNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVI 153
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ +I++ N+L+ MY K G + SA + F +M R D VSWN++++GY G ++
Sbjct: 154 KSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVR-DLVSWNSMISGYVSVGDGWRSL 212
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ F EMQ + +F+ +L AC+ L GK+IHC ++R+ E++V+ + +LV++Y
Sbjct: 213 SCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMY 272
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITF 581
KC ++YA R+F + + ++ N+MI G+ N + E+ M++ G + PD IT
Sbjct: 273 AKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITM 332
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L C + L + + G +P L ++ +Y G +K E +M
Sbjct: 333 INLLPPCAQLEAILLG-KSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQM 390
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 186/389 (47%), Gaps = 35/389 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + ++ Y KCG +D A LFD++ ++ +WNAM+G Y+ N + M
Sbjct: 262 VMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQE 321
Query: 137 SG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
G + + IT N+L A+ + + K +HG ++ GF +++LE++LVD YG+C +
Sbjct: 322 GGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLK 381
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F + +N +SWN ++ Y G ++A+ +F + + ++P T A+ L A +
Sbjct: 382 PAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYA 441
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L+S E QIHG + K+ + + V S+ MY KCG L AR + D+ +++ISW +
Sbjct: 442 ELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNT 501
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++ YAI G R + ELF+EM E+ + +
Sbjct: 502 VIMAYAIHGFGRISIELFSEMREKGF-------------------------------EPN 530
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIW 433
T +L C+ + G E + R DY+ N + + +LD+ + GNL A+ +
Sbjct: 531 GSTFVSLLLSCSVAGLVNEGWEYFNSMKR-DYNINPGIEHYGCILDLIGRTGNLDHAKNF 589
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+M W ++LT +G E A
Sbjct: 590 IEEMPLAPTARIWGSLLTASRNKGDVELA 618
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 177/383 (46%), Gaps = 18/383 (4%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L CA +AI+ + + + P + L ++ YG+CG L A LF +M ER
Sbjct: 334 NLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER 393
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+ SWNAM+ +YT+NG + + LF D+ + + + T A++L + AE L ++Q+H
Sbjct: 394 NLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIH 453
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
G + K N + +S+V YGKC + AR +FD + K+ +SWN ++ Y + G G+
Sbjct: 454 GYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGR 513
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGS 284
++ +F +M + P TF + L +CS EG + +K D+ + + G
Sbjct: 514 ISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNS-MKRDYNINPGIEHYGC 572
Query: 285 LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREAR---ELFNEMPERN 340
+ ++ + G L+ A+ +++ P W S+++ G + A E + N
Sbjct: 573 ILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDN 632
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ + Y + W++ F M+K L G S + + +
Sbjct: 633 TGCYVLLSNMYAEAGRWEDVERIKFHMKKEG-----------LEKSVGCSVVDLSSKTFR 681
Query: 401 FIHRNDYSSNIFVSNALLDMYRK 423
F++++ + I + +LD+ K
Sbjct: 682 FVNQDRSDNEINMVYDVLDIISK 704
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 271/498 (54%), Gaps = 5/498 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ Q N + WN ++R + + + M+ +M+ P +TF L +C+
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIH ++K+ E D SL MY + GRLEDAR + D +R+++S T++
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G +R AR++F+ + ER+V+SWNAM+ GY + ++EAL+ M +T D+
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL +L+ CA I++G+E+H + + + S++ + NA + +Y KCG++ A F
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+S +D VSWN ++ GY +EA+ F EM + P+ T ++L ACA++ +++
Sbjct: 276 GLSC-KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 334
Query: 495 QGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G+ IH ++ + + R +L+++Y KC +E A +VF + N+MI G
Sbjct: 335 IGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F + R A ++F M+K GI+PD IT G+L AC H G + L F S+ Y I P
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITP 454
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY CMI L G KE E+ ++ MP P + + C+ +G L E A++L
Sbjct: 455 KLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKL 514
Query: 673 NELNPWAPFQFKITTNRF 690
E+ P + + +N +
Sbjct: 515 MEIEPENSGSYVLLSNIY 532
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 230/540 (42%), Gaps = 100/540 (18%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ E + WN ML + LE+++ M G N T+ +L+S A+
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------------- 196
+Q+H ++K G + +SL+ Y + + D
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 197 ------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
AR++FD I ++ VSWN ++ Y+ +EA+ +F +M+R ++RP
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLD 303
T + L AC+ S G +IH ++ G + ++ + +Y KCG +E A GL +
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
++++SW +++ GY T L+KEAL
Sbjct: 276 GLSCKDVVSWNTLIGGY-------------------------------THMNLYKEALLL 304
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMY 421
M ++ + + VT+ +L CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMY 364
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG++ +A F M + SWNA++ G+A G++ A FS M+ P T
Sbjct: 365 AKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITL 423
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
LL+AC++ L+ G+ I V ++ Y I +
Sbjct: 424 VGLLSACSHSGLLDLGRHIFKSVTQD-YNI---------------------------TPK 455
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
L+ C +LG H +EA E+ +M E PD + + +L AC GN++LA F
Sbjct: 456 LEHYGCMIDLLG--HAGLFKEAEEIIHMMPME---PDGVIWCSLLKACKMHGNLELAESF 510
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 224/518 (43%), Gaps = 80/518 (15%)
Query: 7 TILKNILSKSSPKPTPSKTLTKTIS-GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLE 65
T+L+ L+ SS +P + + +S GH+ P +Y+ + L + CA SK E R++
Sbjct: 53 TMLRG-LASSSDLVSPLEMYVRMVSXGHV----PNAYT-FPFLLKSCAKSKTFEEGRQIH 106
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE----------------------- 102
+ ++ + I Y + G L+DAR +FD
Sbjct: 107 AQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVR 166
Query: 103 --------MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ ERD SWNAM+ Y +N LELF +M + V ++ T +VL + A
Sbjct: 167 SARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACA 226
Query: 155 EELELGVSKQLHGLI-VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+ + + +++H L+ GF ++ + ++ + Y KC + A +F+ + K+ VSWN
Sbjct: 227 QSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWN 286
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y KEA+++F +MLR P + T + L AC+ L + G IH + I
Sbjct: 287 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIH---VYI 343
Query: 274 DFEGDDVVLG-----SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
D V G SL +MY KCG +E A + + +++ SW +++ G+A+ GR
Sbjct: 344 DKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANA 403
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +LF+ MRK + D +TL +L+ C+
Sbjct: 404 AFDLFSR-------------------------------MRKNGIEPDDITLVGLLSACSH 432
Query: 389 LSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +G+ + + ++ + + + ++D+ G + A + M D V W
Sbjct: 433 SGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWC 492
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
++L G E A SF++ E P LL+
Sbjct: 493 SLLKACKMHGNLELA-ESFAQKLMEIEPENSGSYVLLS 529
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 161/364 (44%), Gaps = 21/364 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYP-TPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+ CA S +I R++ + + + + ++N I Y KCG+++ A GLF+ + +
Sbjct: 221 VLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK 280
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
D SWN ++G YT L LF +M SG S N +T +VL + A + + + +H
Sbjct: 281 DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIH 340
Query: 167 GLIVKR--GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
I KR G L +SL+D Y KC + A ++F+ + +K+ SWN ++ + + G
Sbjct: 341 VYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGR 400
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--L 282
A +F +M + I P + T L ACS G I + + D+ +
Sbjct: 401 ANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ-DYNITPKLEHY 459
Query: 283 GSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEMPE--- 338
G + ++ G ++A ++ P E + + W S++ + G + A ++ E
Sbjct: 460 GCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEP 519
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
N S+ + Y + W++ I +V G + G S I++ V
Sbjct: 520 ENSGSYVLLSNIYATAGRWED-----------VARIREVLNGKGMKKVPGCSSIEIDSVV 568
Query: 399 HGFI 402
H FI
Sbjct: 569 HEFI 572
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 170/617 (27%), Positives = 301/617 (48%), Gaps = 38/617 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ + CY G+L ARG+ D P D ++ MLG G + L DM +
Sbjct: 59 TKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPA 118
Query: 141 ANQ--ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
A Q + + L++ + ++LH +VK G ++ +SLVD Y K + +AR
Sbjct: 119 AAQADVVLSLALKACVRSADFRYGRRLHCDVVKAGGADGFVM-NSLVDMYAKAGDLENAR 177
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++FD + +N VSW ++ + G +E +V+F +M ++++ P +T + L AC+ L
Sbjct: 178 KVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLG 237
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
++G IHG +IK + + SL +MY KC ++EDA
Sbjct: 238 GLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDA-------------------- 277
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQV 377
R +F+E+ +++ W AM+ GYT++ +AL FL +K + + V
Sbjct: 278 -----------RRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQL-FLHKKFVSIVPNSV 325
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ +++ A L + +G+ VH + + V NAL+DMY KC L A F ++
Sbjct: 326 TIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRI 385
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+D V+WN+++ GY+ G + E++ F+ M+ + P + L+AC ++ L G
Sbjct: 386 -LIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIG 444
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K H + I+ + N+ AL+ +Y+KC L A RVF + + + + ++MI G+
Sbjct: 445 KGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQ 504
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
++++F M KE I P+ + F IL AC H G V ++FDSM + I P ++H
Sbjct: 505 GDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKH 564
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ + R G ++E +F+ MP + + C+ + GE A +++ L+
Sbjct: 565 YACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALH 624
Query: 677 PWAPFQFKITTNRFDRY 693
P P + + +N + Y
Sbjct: 625 PETPDFYVLMSNLYTSY 641
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 216/422 (51%), Gaps = 33/422 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F++N ++ Y K G+L++AR +FD +PER+ SW +ML QNG L LF +M
Sbjct: 158 FVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQD 217
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
V ++ T +VL + A L + +HG ++K G N + +SL+D Y KC + DA
Sbjct: 218 NVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDA 277
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+FD+++ + V W ++ Y +A+ +F I P + T A + A + L
Sbjct: 278 RRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQL 337
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +H + +K+ DVV +L +MY KC L +A + + +++++W S++
Sbjct: 338 RHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMM 397
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+GY+ +G E+ LFN MR D +
Sbjct: 398 AGYSENGMANESLVLFNR-------------------------------MRMQGISPDAI 426
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
++ L+ C L+++ +GK H + + + SNI+V+ ALL++Y KC +L SA+ F M
Sbjct: 427 SVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDM 486
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
+ R+ V+W+A++ GY +G S ++ F+EM E P++ F ++L+AC++ + G
Sbjct: 487 TD-RNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAG 545
Query: 497 KQ 498
K+
Sbjct: 546 KE 547
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 204/440 (46%), Gaps = 36/440 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
P Y++ + + CA + + R + +++ + + F+ ++ Y KC ++DAR
Sbjct: 220 HPSEYTMVS-VLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDAR 278
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FDE+ D W AM+ YTQN P L+LFL + N +T A V+ +SA+
Sbjct: 279 RVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLR 338
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + + +H + VK G + ++ ++LVD Y KC + +A +F I K+ V+WN ++
Sbjct: 339 HLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMA 398
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G E++V+F +M + I P + NAL AC L+ + G H IK F
Sbjct: 399 GYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMS 458
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V +L +Y KC L A+ + + +RN ++W++++ GY + G + +LFNEM
Sbjct: 459 NIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEML 518
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ N+ ++V IL+ C+ + GKE
Sbjct: 519 KENI-------------------------------HPNEVVFTSILSACSHTGMVTAGKE 547
Query: 398 VHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG---Y 453
+ R+ + + ++ ++D+ + GNL A + M + W + L G +
Sbjct: 548 YFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLH 607
Query: 454 ARRGQSEEAMTSFSEMQWET 473
+R EEA+ + + ET
Sbjct: 608 SRLEFGEEAIKKMAALHPET 627
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 324/658 (49%), Gaps = 39/658 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ ++ L + C ++ + + + L+ F P L N I Y K G+ A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 99 LFDEM---PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+F+ M +RD SW+AM+ Y NG +++F++ G+ N Y V+R+ +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 156 ELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWN 213
+GV + G ++K G F +V + SL+D + K +A ++FD + N V+W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
+++ R + G +EA+ F M+ FT ++ AC+ L + G Q+H I+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D V SL +MY KC + G + + R++F
Sbjct: 299 GLVDD--VECSLVDMYAKC----------------------------SADGSVDDCRKVF 328
Query: 334 NEMPERNVISWNAMLAGYTRSL-LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M + +V+SW A++ GY ++ L EA++ F ++ + + + T C LS+
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++GK+V G + +SN V+N+++ M+ K + A+ F +S++ + VS+N L
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLD 447
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G R E+A SE+ + E S FTF +LL+ AN+ S+ +G+QIH V++
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
N AL+ +Y+KC ++ A RVF + +VI SMI GF + LE F M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG+KP+ +T+ IL AC H G V + F+SM + I P++EHY CM+ L CR G +
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ +F+N MPF V + R CR + LG+ AAR++ EL+P P + +N
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 44/385 (11%)
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ R+L AG+ + AV M R+ IRP++ TF++ L +C G +H +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 274 DFEGDDVVLGSLTEMYVKCG---RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
D E D V+ SL +Y K G + ED + + +R+++SW+++++ Y +GR +A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
++F E E ++ + R+ DFV + +VTLG ++
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRAC---SNSDFV--------GVGRVTLGFLM------- 193
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN-LRSARIWFYQMSQRRDKVSWNAV 449
K G + S++ V +L+DM+ K N +A F +MS+ + V+W +
Sbjct: 194 --KTGH----------FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE-LNVVTWTLM 240
Query: 450 LTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+T + G EA+ F +M S KFT ++ +ACA + +L GKQ+H + IR+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 509 EINVVCRGALVEVYTKCCC---LEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREALE 564
+V C +LV++Y KC ++ +VF V+ ++I G+ N EA+
Sbjct: 301 VDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 565 VFGLMKKEG-IKPDHITFHGILLAC 588
+F M +G ++P+H TF AC
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 138/302 (45%), Gaps = 25/302 (8%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
ALD + R + +D VT +L C + ++GK VH + D + + N+L+
Sbjct: 48 ALDL--MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 420 MYRKCGNLRSARIWFYQMSQ--RRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPS 476
+Y K G+ A F M + +RD VSW+A++ Y G+ +A+ F E ++ P+
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKC-CCLEYAIRV 534
+ + ++ AC+N + G+ F+++ + + VC G +L++++ K E A +V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + S L+V+ MI REA+ F M G + D T + AC N+
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 595 KLALQFFDSMRCKYGIIPQLEHYEC-MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
L Q S + G++ + EC ++ +Y + ++D RK+F
Sbjct: 286 SLGKQ-LHSWAIRSGLV---DDVECSLVDMYAKCSADGSVDD-------------CRKVF 328
Query: 654 DK 655
D+
Sbjct: 329 DR 330
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/676 (26%), Positives = 320/676 (47%), Gaps = 40/676 (5%)
Query: 22 PSKTLTKTISGHL-KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
PS T HL ++ P + L L C + ++ R L + L+ +
Sbjct: 7 PSATPDAHSVDHLPRASSPDANPLLHRLLPACTTLPSL---RALHARLLAHGLLRGLRAH 63
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ + CY G+L AR + DE P D ++ LG + G + + DM +
Sbjct: 64 TKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPA 123
Query: 141 ANQ--ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + + L+++ + G ++LH +VK G G++ + ++LVD Y K + +AR
Sbjct: 124 EQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNAR 182
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++FD I ++N VSW ++ L G KE +V+F +M +E I P +T A+ L AC+ L
Sbjct: 183 KVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLG 242
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S ++G IHG ++K + + ++ +MYVKCG EDAR + D+ +++ WT+++
Sbjct: 243 SLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIV 302
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY +G +A LF + ++ + VT
Sbjct: 303 GYTQNGSPLDALLLFVDDKFMRIVP-------------------------------NSVT 331
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ +L+ A L + +G+ +HG + N V NAL+DMY KC L A+ F ++
Sbjct: 332 IATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRV- 390
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+D V+WN+++ GYA +A+ FS M+ + + P + L+AC + L GK
Sbjct: 391 LNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGK 450
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
H + +++ + N+ AL+ +Y KC L A RVF E + + + +MI G+
Sbjct: 451 CFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQG 510
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
++++F M K+ I+P+ F IL C H G V + + F+SM + I P ++HY
Sbjct: 511 DSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHY 570
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ + R G ++E +F+ +MP + + C+ + E A R+ L+P
Sbjct: 571 ACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHP 630
Query: 678 WAPFQFKITTNRFDRY 693
P + +N + Y
Sbjct: 631 DTPDFCVMMSNLYTSY 646
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 186/589 (31%), Positives = 294/589 (49%), Gaps = 35/589 (5%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MPERD SWN+++ A+ NG + M SG N + +V+ + E E
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+H L VK G V L ++LVD YGK + + ++FD + +N VSWN + +L A
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G + + MF KM ++ P + T ++ L A L S G ++HG IK + D V
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL +MY K G LE +A +F +M +RNV+
Sbjct: 181 NSLVDMYAKFGSLE-------------------------------KASTIFEQMKDRNVV 209
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWNAM+A ++ EA V M+K+ + + +TL +L CA ++ +KMGK++H +
Sbjct: 210 SWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWS 269
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R ++F+SNAL+DMY KCG L AR F + +D VS+N ++ GY++ E+
Sbjct: 270 IRRGLMFDLFISNALIDMYSKCGQLSLARNIFER--SEKDDVSYNTLILGYSQSPWCFES 327
Query: 463 MTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F +M+ +F L+AC N+S + GK+IHC ++R + +L+++
Sbjct: 328 LLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDL 387
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
YTK L A ++F + + DV N+MILG+ + + A E+F LMK +G+ DH+++
Sbjct: 388 YTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSY 447
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V ++F M + I PQ HY CM+ L R G + + + + MP
Sbjct: 448 IAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP 506
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F + + CR +G L +WAA L EL P + + N +
Sbjct: 507 FPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMY 555
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 211/423 (49%), Gaps = 34/423 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L N ++ YGK G+++ + +FD M E++ SWN+ +G + GF G L +F M+
Sbjct: 76 VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSE 135
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
V IT +++L + E + +++HG +KR ++ + +SLVD Y K +
Sbjct: 136 HNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEK 195
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ ++++N VSWN ++ + G EA + M + P + T N L AC+
Sbjct: 196 ASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACAR 255
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
++S G QIH I+ D + +L +MY KCG+L AR + ++ E++ +S+ ++
Sbjct: 256 MASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERS-EKDDVSYNTL 314
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GY+ S E+ LF + MR D D
Sbjct: 315 ILGYSQSPWCFESLLLFKQ-------------------------------MRSVGIDYDA 343
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V+ L+ C LS K GKE+H + R S + F+SN+LLD+Y K G L +A F +
Sbjct: 344 VSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNK 403
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ 495
++ ++D SWN ++ GY GQ + A F M+ + ++ +LAAC++ +++
Sbjct: 404 IT-KKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDK 462
Query: 496 GKQ 498
GK+
Sbjct: 463 GKK 465
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 9/304 (2%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I+ Y KCG L AR +F E E+D S+N ++ Y+Q+ + +L LF M
Sbjct: 278 LFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRS 336
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ + +++ L + K++H ++V+R G+ L +SL+D Y K ++
Sbjct: 337 VGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVT 396
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++F+ I K+ SWN ++ Y + G A +F M + + + ++ L ACS
Sbjct: 397 ASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSH 456
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED-ARGLLDQPDERNIISWTS 315
+G + ++ + E + + ++ + G+L A + D P N W +
Sbjct: 457 GGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGA 516
Query: 316 IVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM--RK 369
++ I G I A LF PE + + M+ Y + W EA LM RK
Sbjct: 517 LLGACRIHGNIELAQWAAEHLFELKPEHSGY-YTLMINMYAETGRWNEANKIRKLMKSRK 575
Query: 370 TTKD 373
K+
Sbjct: 576 VQKN 579
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 1/174 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C + +++ LV + FL N ++ Y K G L A +F+++ ++D SW
Sbjct: 353 CTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASW 412
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N M+ Y +G ELF M G+ + ++Y VL + + + K+ +V
Sbjct: 413 NTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA 472
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN 224
+ + + +VD G+ ++ + D+ N+ W ++ + GN
Sbjct: 473 QNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGN 526
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 317/656 (48%), Gaps = 39/656 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P SY+ Y + AS+ A+ +++ S+ V + + N + Y K G++DDAR
Sbjct: 129 PNSYT-YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 187
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--EE 156
+FD M ERD SW M+G Q+G LFL M G N TY ++L +SA
Sbjct: 188 VFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITST 247
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L K++H K GF ++ + ++L+ Y KC + DAR +FD + +++ +SWN ++
Sbjct: 248 GALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMI 307
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDF 275
G G EA +F KM +E P + T+ +L + +E + ++H +++
Sbjct: 308 GGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYL-SLLNTHVSTGAWEWVKEVHKHAVEVGL 366
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D V + MY++CG ++DA+ +F++
Sbjct: 367 VSDLRVGSAFVHMYIRCGSIDDAQ-------------------------------LIFDK 395
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ RNV +WNAM+ G + +EAL MR+ D T IL+ G ++
Sbjct: 396 LAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV 455
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
KEVH + + ++ V NAL+ MY KCGN A+ F M +R + +W +++G A+
Sbjct: 456 KEVHSYA-IDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVER-NVTTWTVMISGLAQ 513
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G EA + F +M E P T+ ++L+ACA+ +LE K++H + ++
Sbjct: 514 HGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRV 573
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
ALV +Y KC ++ A RVF + DV MI G + RG +AL++F MK EG
Sbjct: 574 GNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGF 633
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
KP+ +F +L AC H G V + F S+ YGI P +EHY CM+ L R G ++E +
Sbjct: 634 KPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAK 693
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F+ MP P + C G + E+AA+ +L P + + + +N +
Sbjct: 694 HFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIY 749
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 164/609 (26%), Positives = 284/609 (46%), Gaps = 41/609 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C S ++ +K+ ++++ V + + Y KCG++DDA+ +FD+M
Sbjct: 33 YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMV 92
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ SW M+G G FL M G N TY ++L ++A L K+
Sbjct: 93 ERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKE 152
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H V G ++ + ++LV Y K + DAR +FD + ++ SW V++ G
Sbjct: 153 VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGR 212
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS-PYEGM-QIHGVIIKIDFEGDDVVL 282
G+EA +F +M R P T+ + L A + S+ E + ++H K F D V
Sbjct: 213 GQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVG 272
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L MY KCG ++DAR + D +R++ISW +++ G A +G EA +F +M + +
Sbjct: 273 NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV 332
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
D T +LN + KEVH
Sbjct: 333 P-------------------------------DSTTYLSLLNTHVSTGAWEWVKEVHKHA 361
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
S++ V +A + MY +CG++ A++ F +++ R+ +WNA++ G A++ EA
Sbjct: 362 VEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV-RNVTTWNAMIGGVAQQKCGREA 420
Query: 463 MTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
++ F +M+ E P TF +L+A +LE K++H + I + +++ ALV +
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAI-DAGLVDLRVGNALVHM 479
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC YA +VF + +V MI G + G EA +F M +EGI PD T+
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE----LEDFV 637
IL AC G ++ ++ S G++ L ++ +Y + G + + +D +
Sbjct: 540 VSILSACASTGALEW-VKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDML 598
Query: 638 NRMPFNPTV 646
R ++ TV
Sbjct: 599 ERDVYSWTV 607
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/540 (29%), Positives = 261/540 (48%), Gaps = 41/540 (7%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+G Y + G+ ++++ M G N+ITY ++L++ + L K++H I++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F +V +E++LV+ Y KC + DA+ +FD + +N +SW V++ G G+EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M RE P ++T+ + L A + + ++H + D V +L MY K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
++DAR + D ER+I SWT ++ G A GR +EA LF +M +
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLP---------- 230
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS--EIKMGKEVHGFIHRNDYSSNI 411
+ T ILN A S ++ KEVH + + S++
Sbjct: 231 ---------------------NLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDL 269
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V NAL+ MY KCG++ AR+ F M RD +SWNA++ G A+ G EA T F +MQ
Sbjct: 270 RVGNALIHMYAKCGSIDDARLVFDGMCD-RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQ 328
Query: 472 ET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E P T+ +LL + + E K++H + ++ A V +Y +C ++
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD 388
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A +F + + +V N+MI G + GREAL +F M++EG PD TF IL A +
Sbjct: 389 AQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVG 448
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG---YMKEL-EDFVNRMPFNPTV 646
E ++ ++ S G++ L ++ +Y + G Y K++ +D V R TV
Sbjct: 449 EEALEW-VKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTV 506
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 302/586 (51%), Gaps = 29/586 (4%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M +G + T +VL++ E HGLI GF NV + ++LV Y +C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 194 MTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLN----- 244
+ +A +FD+I + + +SWN IV ++ + N A+ +F KM L +P N
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ N L AC L + + ++HG I+ D V +L + Y KCG +E+A + +
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEA 360
+ ++++SW ++V+GY+ SG + A ELF M + N+ ++W A++AGY++ EA
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-------DYSS---N 410
L+ M + + VT+ +L+ CA L G E+H + +N D+ +
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ V NAL+DMY KC + ++AR F + + R+ V+W ++ G+A+ G S +A+ F EM
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 470 QWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YEINV-VCRGALVEVYTK 524
E P+ +T +L ACA+++++ GKQIH +V+R+ Y+ + L+ +Y+K
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C ++ A VF S I SM+ G+ + RG EAL++F M+K G PD ITF +
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V L +FDSM YG+ P+ EHY I L R+G + + V MP P
Sbjct: 481 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEP 540
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
T + + CR + L E A +L E+N + + +N +
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIY 586
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 238/481 (49%), Gaps = 93/481 (19%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPER---DGGSWNAMLGAYTQNGFPGRTLELFLD 133
VF+ N + Y +CG+L++A +FDE+ +R D SWN+++ A+ ++ L+LF
Sbjct: 45 VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK 104
Query: 134 MN------HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
M + ++ I+ N+L + + +K++HG ++ G +V + ++L+DA
Sbjct: 105 MTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDA 164
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-- 245
Y KC +M +A ++F+ ++ K+ VSWN +V Y +GN K A +F M +E+I PL+
Sbjct: 165 YAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENI-PLDMVT 223
Query: 246 ----------------------------------TFANALFACSFLSSPYEGMQIHGVII 271
T + L AC+ L + +GM+IH +
Sbjct: 224 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSL 283
Query: 272 K-------IDFEGDD---VVLGSLTEMYVKCGRLEDARGLLDQP--DERNIISWTSIVSG 319
K DF G+D +V +L +MY KC + AR + D +ERN+++WT ++ G
Sbjct: 284 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 343
Query: 320 YAISGRIREARELFNEM-PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+A G +A +LF EM E ++ NA T
Sbjct: 344 HAQYGDSNDALKLFVEMISEPYGVAPNAY------------------------------T 373
Query: 379 LGLILNVCAGLSEIKMGKEVHGFI--HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ IL CA L+ I++GK++H ++ H SS FV+N L++MY KCG++ +AR F
Sbjct: 374 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 433
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
MSQ + +SW +++TGY G+ EA+ F +M+ P TF +L AC++ ++Q
Sbjct: 434 MSQ-KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQ 492
Query: 496 G 496
G
Sbjct: 493 G 493
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 53/342 (15%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
++ C S KA+ + +++ N + VF+ N I+ Y KCG +++A +F+ M +
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 184
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELF---------LDM---------------NH------ 136
D SWNAM+ Y+Q+G ELF LDM +H
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244
Query: 137 -----SGVSANQITYANVLRSSAEELELGVSKQLHG-------LIVKRGFCG---NVILE 181
SG N +T +VL + A ++H L + F G ++++
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 182 SSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE- 238
++L+D Y KC AR +FDDI + +N V+W V++ + G+ +A+ +F +M+ E
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364
Query: 239 -DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD---VVLGSLTEMYVKCGR 294
+ P +T + L AC+ L++ G QIH +++ + D V L MY KCG
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR-HHQYDSSAYFVANCLINMYSKCGD 423
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
++ AR + D +++ ISWTS+++GY + GR EA ++F++M
Sbjct: 424 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKM 465
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTF--YPTPPVFLLNRAIECYGKCGNLDDA 96
P +Y++ + CA AI +++ + ++ Y + F+ N I Y KCG++D A
Sbjct: 369 PNAYTISC-ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTA 427
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
R +FD M ++ SW +M+ Y +G L++F M +G + IT+ VL
Sbjct: 428 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 481
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 193/650 (29%), Positives = 314/650 (48%), Gaps = 36/650 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L + +SK++ + + L +VT V++ I Y C D A+ +FD +
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 108 GGSW-NAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEELELGVSKQL 165
S N ++ YT+N L LF M + + + TY +VL++ + + + +
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +VK G ++++ SSLV Y KC A ++FD++ +K+ WN ++ Y +G
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA+ F M R P + T A+ +C+ L G +IH ++ F D V +L
Sbjct: 189 EEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG+LE A E+F +MP + V++WN
Sbjct: 249 VDMYGKCGQLE-------------------------------MAIEVFEQMPNKTVVAWN 277
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+M+ GY + M TL L C+ +++ GK VHG+I RN
Sbjct: 278 SMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRN 337
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+IF++++L+D+Y KCG + SA F ++ + VSWN +++GY G+ +A+
Sbjct: 338 RIQPDIFLNSSLMDLYFKCGKVESAETIF-KLMPKTTTVSWNVMISGYVTEGKLFDALRL 396
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EM P TF ++LAAC+ +++LE+G++IH ++ N V GAL+++Y K
Sbjct: 397 FGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAK 456
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C +E A VFK D++ SMI + + R EALE+F M + +KPD +TF I
Sbjct: 457 CGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAI 516
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP-FN 643
L AC H G V L F+ M YGIIP++EHY C+I L R G + E + + P +
Sbjct: 517 LSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEIS 576
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDRY 693
+L +F CR + LG A L + +P + I +N + +
Sbjct: 577 DDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASF 626
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 223/460 (48%), Gaps = 34/460 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P SY+ Y + + C + +V + + + LV + + + + Y KC + A
Sbjct: 103 KPDSYT-YPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAV 161
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFDEMP++D WN ++ Y Q+G L F M G + +T + S A L
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+L +++H +V GF + + ++LVD YGKC + A +F+ + NK V+WN ++
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+G + +F +M E ++P T + L ACS + EG +HG II+ +
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP 341
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D + SL ++Y KCG++E A + + +SW ++SGY G++ +A LF E
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGE-- 399
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
M K+ + D +T +L C+ L+ ++ G+E
Sbjct: 400 -----------------------------MSKSFVEPDAITFTSVLAACSQLAALEKGRE 430
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H I + +N V ALLDMY KCG + A ++ RD VSW +++T Y G
Sbjct: 431 IHNLIVERNLGNNEVVMGALLDMYAKCGAVEEA-FGVFKCLPERDLVSWTSMITAYGSHG 489
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ EA+ F+EM Q +P + TF +L+AC++ ++ G
Sbjct: 490 RVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG 529
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/634 (28%), Positives = 319/634 (50%), Gaps = 32/634 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA++ Q ++ + L +++ + +F N + Y G L+DA LFDEMP
Sbjct: 6 YANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP 65
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ S+ + ++++ R L L + G NQ + +L+
Sbjct: 66 LTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLS 125
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H + K G + + ++L+DAY C + AR++FD I K+ VSW +V Y
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++++++F +M RP NFT + AL +C+ L + G +HG +K+ ++ D V +
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIA 245
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L E+Y K G + +A+ ++ + ++I W+ ++S YA S + +EA ELF M + +V+
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVP 305
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
N T +L CA L + +G ++H + +
Sbjct: 306 N------------------------------NFTFASVLQACASLVLLNLGNQIHSCVLK 335
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
SN+FVSNAL+D+Y KCG + ++ + + S +++V+WN ++ GY + G E+A+
Sbjct: 336 VGLDSNVFVSNALMDVYAKCGEIENS-VKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALN 394
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
FS M + +P++ T+ ++L A A++ +LE G+QIH I+ Y + V +L+++Y
Sbjct: 395 LFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYA 454
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC ++ A F + D + N++I G+ + G EAL +F +M++ KP+ +TF G
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVG 514
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC + G + F SM YGI P +EHY CM+ L R G E + +PF
Sbjct: 515 VLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQ 574
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P+V + R + C + LG+ A+R+ E+ P
Sbjct: 575 PSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEP 608
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 217/445 (48%), Gaps = 34/445 (7%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
+YAN+L+ + + K LH I+K G ++ ++ L++ Y + DA ++FD++
Sbjct: 5 SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
N VS+ + + + + + A + ++ RE F F L + +
Sbjct: 65 PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+H + K+ + D V +L + Y CG ++ AR + D ++++SWT +V+ YA +
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENY 184
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
++ LF +M + GY + T+ L
Sbjct: 185 CHEDSLLLFCQMR----------IMGYRP---------------------NNFTISAALK 213
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C GL K+GK VHG + Y +++V ALL++Y K G + A+ +F +M + D +
Sbjct: 214 SCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMP-KDDLI 272
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCF 502
W+ +++ YA+ +S+EA+ F M+ + P+ FTF ++L ACA++ L G QIH
Sbjct: 273 PWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSC 332
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
V++ + NV AL++VY KC +E ++++F S+ + + N++I+G+ G +A
Sbjct: 333 VLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKA 392
Query: 563 LEVFGLMKKEGIKPDHITFHGILLA 587
L +F M I+P +T+ +L A
Sbjct: 393 LNLFSNMLGLDIQPTEVTYSSVLRA 417
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 324/658 (49%), Gaps = 39/658 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ ++ L + C ++ + + + L+ F P L N I Y K G+ A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 99 LFDEM---PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+F+ M +RD SW+AM+ Y NG +++F++ G+ N Y V+R+ +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 156 ELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWN 213
+GV + G ++K G F +V + SL+D + K +A ++FD + N V+W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
+++ R + G +EA+ F M+ FT ++ AC+ L + G Q+H I+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D V SL +MY KC + G + + R++F
Sbjct: 299 GLVDD--VECSLVDMYAKC----------------------------SADGSVDDCRKVF 328
Query: 334 NEMPERNVISWNAMLAGYTRSL-LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M + +V+SW A++ GY ++ L EA++ F ++ + + + T C LS+
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++GK+V G + +SN V+N+++ M+ K + A+ F +S++ + VS+N L
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLD 447
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G R E+A SE+ + E S FTF +LL+ AN+ S+ +G+QIH V++
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
N AL+ +Y+KC ++ A RVF + +VI SMI GF + LE F M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG+KP+ +T+ IL AC H G V + F+SM + I P++EHY CM+ L CR G +
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ +F+N MPF V + R CR + LG+ AAR++ EL+P P + +N
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 44/385 (11%)
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ R+L AG+ + AV M R+ IRP++ TF++ L +C G +H +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 274 DFEGDDVVLGSLTEMYVKCG---RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
D E D V+ SL +Y K G + ED + + +R+++SW+++++ Y +GR +A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
++F E E ++ + R+ DFV + +VTLG ++
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRAC---SNSDFV--------GVGRVTLGFLM------- 193
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN-LRSARIWFYQMSQRRDKVSWNAV 449
K G + S++ V +L+DM+ K N +A F +MS+ + V+W +
Sbjct: 194 --KTGH----------FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE-LNVVTWTLM 240
Query: 450 LTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+T + G EA+ F +M S KFT ++ +ACA + +L GKQ+H + IR+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 509 EINVVCRGALVEVYTKCCC---LEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREALE 564
+V C +LV++Y KC ++ +VF V+ ++I G+ N EA+
Sbjct: 301 VDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 565 VFGLMKKEG-IKPDHITFHGILLAC 588
+F M +G ++P+H TF AC
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 23/301 (7%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
ALD + R + +D VT +L C + ++GK VH + D + + N+L+
Sbjct: 48 ALDL--MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 420 MYRKCGNLRSARIWFYQMSQ--RRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPS 476
+Y K G+ A F M + +RD VSW+A++ Y G+ +A+ F E ++ P+
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKC-CCLEYAIRV 534
+ + ++ AC+N + G+ F+++ + + VC G +L++++ K E A +V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + S L+V+ MI REA+ F M G + D T + AC N+
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
L Q S + G++ + EC L D + + +V RK+FD
Sbjct: 286 SLGKQ-LHSWAIRSGLVDDV---EC------------SLVDMYAKCSADGSVDDCRKVFD 329
Query: 655 K 655
+
Sbjct: 330 R 330
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/727 (26%), Positives = 328/727 (45%), Gaps = 127/727 (17%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG------- 98
A + C + A+ AR L S L+ VFL N + Y CG L DAR
Sbjct: 29 ADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEIT 88
Query: 99 -------------------------LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
LF MP RD SWN ++ Y Q+G L++F+
Sbjct: 89 EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148
Query: 134 MNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M +G S N T+ V++S V+ QL GL+ K + ++++LVD +C
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 193 VMTDARRMFDDIQN-------------------------------KNAVSWNVIVRRYLV 221
M A + F I+N ++ VSWN+++
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+G +EA+ M M + +RP + T+ ++L AC+ LSS G Q+H +I+ D V
Sbjct: 269 SGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYV 328
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++ E+Y KCG ++A+ + +RN +SWT ++ G+ G E+ ELFN+
Sbjct: 329 ASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQ------ 382
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
MR +DQ L +++ C +I +G ++H
Sbjct: 383 -------------------------MRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--------------------- 440
++ ++ + VSN+L+ MY KCGNL++A + F M++R
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Query: 441 ---------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACAN 489
R+ ++WNA+L Y + G E+ + +S+M E P T+ TL CA+
Sbjct: 478 REFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCAD 537
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
I + + G QI ++ ++ A++ +Y+KC + A + F S D++ N+M
Sbjct: 538 IGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAM 597
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + G++A+E+F + +G KPD+I++ +L C H G V+ +FD M+ +
Sbjct: 598 ITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHN 657
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P LEH+ CM+ L R G++ E ++ ++ MP PT + + C+ +G L E AA
Sbjct: 658 ISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAA 717
Query: 670 RRLNELN 676
+ L +L+
Sbjct: 718 KHLFDLD 724
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 187/399 (46%), Gaps = 38/399 (9%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
++S S + L + H K P S + Y CA ++ ++L ++
Sbjct: 262 VISALSKSGRVREALDMVVDMHGKGVRPDS-TTYTSSLTACARLSSLEWGKQLHVQVIRN 320
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
P ++ + +E Y KCG +A+ +F + +R+ SW ++G + Q G ++ELF
Sbjct: 321 LPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELF 380
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M ++ +Q A ++ +++ + QLH L +K G V++ +SL+ Y KC
Sbjct: 381 NQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKC 440
Query: 192 -----------------------MV--------MTDARRMFDDIQNKNAVSWNVIVRRYL 220
M+ + AR FDD+ +N ++WN ++ Y+
Sbjct: 441 GNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYI 500
Query: 221 VAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G ++ + M+ ML E D+ P T+ C+ + + G QI G +K+ D
Sbjct: 501 QHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDT 560
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V+ ++ MY KCGR+ +AR D ++++SW ++++GY+ G ++A E+F+++ +
Sbjct: 561 SVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNK 620
Query: 340 ----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ IS+ A+L+G + S L +E F F M K +I
Sbjct: 621 GAKPDYISYVAVLSGCSHSGLVEEG-KFYFDMMKRDHNI 658
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 186/660 (28%), Positives = 319/660 (48%), Gaps = 40/660 (6%)
Query: 20 PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFL 79
P+ ++T S +L D P++YS + +++ K E Y +
Sbjct: 39 PSSLHSMTAVFSRNL--DSPLTYSSPG----TATECRELIQQAKQEQLAQNAYSVHNMLE 92
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSG 138
LN ++ K G L +R +FD+M RD SW ++ Y L LF +M G
Sbjct: 93 LNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPG 152
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ +Q + L++ + + + LHG VK G +V + S+L+D Y K +
Sbjct: 153 LQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F + +N VSW I+ + AG EA++ F +M + + TFA AL A + S
Sbjct: 213 RVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G IH IK F+ V+ +L MY KCG+ +
Sbjct: 273 LLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKAD---------------------- 310
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
Y + LF +M +V+SW ++ Y + + A++ MRK+ ++ T
Sbjct: 311 -YVM--------RLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYT 361
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+++ CA L+ K G+++HG + R + V+N+++ +Y K G L+SA + F+ ++
Sbjct: 362 FAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGIT 421
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
R+D +SW+ ++ Y++ G ++EA S M+ E +P++F ++L+ C +++ LEQGK
Sbjct: 422 -RKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGK 480
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H V+ + + AL+ +Y+KC +E A ++F ++I +MI G+ +
Sbjct: 481 QVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHG 540
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+EA+ +F + G+KPD++TF G+L AC H G V L +F M +Y I P EHY
Sbjct: 541 YSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHY 600
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C+I L CR G + E E + MP + + CR +G G W A +L L+P
Sbjct: 601 GCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDP 660
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 140/335 (41%), Gaps = 6/335 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ +A + CA+ ++ +++ + + N + Y K G L A
Sbjct: 357 PNKYT-FAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASL 415
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + +D SW+ ++ Y+Q G+ + M G N+ ++VL
Sbjct: 416 VFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMAL 475
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQ+H ++ G ++ S+L+ Y KC + +A ++F+ ++ N +SW ++
Sbjct: 476 LEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMING 535
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFEG 277
Y G +EA+ +F K+ ++P TF L ACS G ++ +
Sbjct: 536 YAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISP 595
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREAR---ELF 333
G + ++ + GRL +A ++ P + + W++++ + G + R E
Sbjct: 596 SKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQL 655
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ + + A+ Y WKEA LM+
Sbjct: 656 LRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMK 690
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/635 (27%), Positives = 314/635 (49%), Gaps = 33/635 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V Y L +LC +A E ++ + + V L N + + + GNL DA +
Sbjct: 95 VEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYV 154
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F +M ERD SWN ++G Y + G L L+ M + + N T+ +VL++ A ++
Sbjct: 155 FGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDI 214
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K++H +++ GF +V + ++L+ Y KC +++AR +FD + ++ +SWN ++ Y
Sbjct: 215 ARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGY 274
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G G E + +F M + P T AC L + G +HG ++K +F GD
Sbjct: 275 FENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDI 334
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+ SL +MY GRLE+A + + + ++++SWT++++ +A E + M
Sbjct: 335 SMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELE 394
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
++ D++TL +L+ CA + + +G +H
Sbjct: 395 GILP-------------------------------DEITLVSVLSACACIGHLDLGIRLH 423
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S++ VSN+L+DMY KC + +A F +S ++ VSW +++ G +S
Sbjct: 424 EIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG-KNVVSWTSLILGLRINNRS 482
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ F +M+ +P+ T ++L+ACA I +L +GK+IH +R + A++
Sbjct: 483 FEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y +C A+ F S DV N ++ G+ + + A+E+F M + I PD I
Sbjct: 543 DMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEI 601
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF +L AC G V L++F+ M+ KY + P L+HY C++ + R G + + DF+
Sbjct: 602 TFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQD 661
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
MP P + + + CR + LGE AA+R+ E
Sbjct: 662 MPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFE 696
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 185/659 (28%), Positives = 322/659 (48%), Gaps = 34/659 (5%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H + P Y L + + C K + R + + + F+ N I Y G+
Sbjct: 136 HWTAVIPTPYVL-SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGS 194
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
A +F +M D ++N ++ + Q G L++F +M SG+ + +T A++L +
Sbjct: 195 FKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAA 254
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A +L KQLH ++K G + I E SL+D Y KC + A +F+ N V W
Sbjct: 255 CASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLW 314
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N+++ Y + ++ +F +M I P FT+ L C+ G QIH + IK
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIK 374
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
FE D V G L +MY K L+ AR +L+
Sbjct: 375 NGFESDMYVSGVLIDMYSKYRCLDKARKILEM---------------------------- 406
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
+ +R+V+SW +M+AGY + +EAL M+ D + L + CAG+ +
Sbjct: 407 ---LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAM 463
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G ++H ++ + Y+++I + N L+++Y +CG A F ++ + D+++WN +++G
Sbjct: 464 RQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG 522
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ + E+A+ F +M Q + + FTF + ++A AN++ ++QGKQ+H ++ +
Sbjct: 523 FGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSE 582
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
AL+ +Y KC +E A +F E S + + N++I + RG EAL++F MK+
Sbjct: 583 TEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQ 642
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
EG+KP+ +TF G+L AC H G V+ L +F SM YG+ P +HY C++ + R G +
Sbjct: 643 EGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLD 702
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
FV+ MP + R + C+ + +GE AA+ L EL P + + +N +
Sbjct: 703 RARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAY 761
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 265/584 (45%), Gaps = 41/584 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y K G + AR +F E+ RD SW AML Y Q G L+ M+ + V
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++VL + + + +H + K+ FC + ++L+ Y A R+
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F D+ + V++N ++ + G+G+ A+ +F +M +RP T A+ L AC+ +
Sbjct: 202 FCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDL 261
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G Q+H ++K D + GSL ++YVKCG +E A + + D N++ W ++ Y
Sbjct: 262 QKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAY 321
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ ++ E+F + M+ T ++ T
Sbjct: 322 GQISDLAKSFEIFGQ-------------------------------MQATGIHPNKFTYP 350
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C +I++G+++H +N + S+++VS L+DMY K L AR +M ++
Sbjct: 351 CILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARK-ILEMLEK 409
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----WETRPSKFTFETLLAACANISSLEQG 496
RD VSW +++ GY + EEA+ +F EMQ W P + +ACA I ++ QG
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW---PDNIGLASAASACAGIKAMRQG 466
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QIH V + Y ++ LV +Y +C E A +F+E D I N +I GF +
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
+AL VF M + G K + TF + A + ++K Q K G + E
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRA-VKTGHTSETEV 585
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
+I LY + G +++ + + M V I C ++G
Sbjct: 586 ANALISLYGKCGSIEDAKMIFSEMSLRNEVSW-NTIITSCSQHG 628
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 223/470 (47%), Gaps = 34/470 (7%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H V RG + ++ + L+D Y K ++ AR++F ++ +++ VSW ++ Y G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
GKEA ++ +M + P + ++ L AC+ +G IH + K F + V
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +Y+ G + A + + +++ +++SG+A G A ++F+EM
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEM------- 236
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
L+G +R D VT+ +L CA + +++ GK++H ++
Sbjct: 237 ---QLSG----------------LRP-----DCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S + +LLD+Y KCG++ +A F + R + V WN +L Y + ++
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAKSF 331
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ P+KFT+ +L C +E G+QIH I+N +E ++ G L+++Y
Sbjct: 332 EIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMY 391
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+K CL+ A ++ + DV+ SMI G+ ++ EAL F M+ G+ PD+I
Sbjct: 392 SKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLA 451
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
AC ++ LQ + G + + ++ LY R G +E
Sbjct: 452 SAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEE 500
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 200/663 (30%), Positives = 321/663 (48%), Gaps = 45/663 (6%)
Query: 22 PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVF--- 78
PS+ L+K S HL + + + Y L Q C S K+I +++ ++ +T +
Sbjct: 4 PSQALSK--SKHLLT----ATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHH 57
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
LL+ Y G AR LFDE+ SWNAM+ YT +G L LF+ M SG
Sbjct: 58 LLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASG 117
Query: 139 VS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ TY V+++ + L + +H V GF + +++SL+ Y C M A
Sbjct: 118 RRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVA 177
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+FD ++ + VSWN ++ Y G KEA+++F M+ + I P T + L CS+L
Sbjct: 178 RRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYL 237
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G ++H ++ + D V SL +MY KC
Sbjct: 238 KELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC------------------------- 272
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G + EA+ +F EM +R+V+SW M+ GY + + AL +M+ + + V
Sbjct: 273 ------GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFV 326
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL +L+ CA L +K G+ +HG+ R S + V AL+DMY KC N+ + F +
Sbjct: 327 TLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKT 386
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
S++R WNA+++G G S +A+ F +M E P+ T +LL A A ++ L+Q
Sbjct: 387 SKQR-TAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQA 445
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK--ESSSLDVIICNSMILGFC 554
+ +H ++IR+ + + L+++Y+KC LE A +F D+I +++I G+
Sbjct: 446 RNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYG 505
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G A+ +F M + G+KP+ ITF IL AC H G V L F M + +
Sbjct: 506 MHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRT 565
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+HY C+I L R G ++E + + M F P + + C + LGE AA+ L E
Sbjct: 566 DHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFE 625
Query: 675 LNP 677
L P
Sbjct: 626 LEP 628
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/635 (27%), Positives = 314/635 (49%), Gaps = 33/635 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V Y L +LC +A E ++ + + V L N + + + GNL DA +
Sbjct: 95 VEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYV 154
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F +M ERD SWN ++G Y + G L L+ M + + N T+ +VL++ A ++
Sbjct: 155 FGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDI 214
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K++H +++ GF +V + ++L+ Y KC +++AR +FD + ++ +SWN ++ Y
Sbjct: 215 ARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGY 274
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G G E + +F M + P T AC L + G +HG ++K +F GD
Sbjct: 275 FENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDI 334
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+ SL +MY GRLE+A + + + ++++SWT++++ +A E + M
Sbjct: 335 SMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELE 394
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
++ D++TL +L+ CA + + +G +H
Sbjct: 395 GILP-------------------------------DEITLVSVLSACACIGHLDLGIRLH 423
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S++ VSN+L+DMY KC + +A F +S ++ VSW +++ G +S
Sbjct: 424 EIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG-KNVVSWTSLILGLRINNRS 482
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ F +M+ +P+ T ++L+ACA I +L +GK+IH +R + A++
Sbjct: 483 FEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y +C A+ F S DV N ++ G+ + + A+E+F M + I PD I
Sbjct: 543 DMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEI 601
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF +L AC G V L++F+ M+ KY + P L+HY C++ + R G + + DF+
Sbjct: 602 TFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQD 661
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
MP P + + + CR + LGE AA+R+ E
Sbjct: 662 MPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFE 696
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 187/678 (27%), Positives = 325/678 (47%), Gaps = 51/678 (7%)
Query: 20 PTPSKTL-TKTISGHLKSDEPV----------------SYSLYAHLFQLCASSKAIVEAR 62
PTPS ISGH +S + S +A + A+ KA VE +
Sbjct: 286 PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQ 345
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
++ + V VF+ + I Y KCG DA+ +FD E++ WNAML + QN
Sbjct: 346 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNE 405
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
P + +F M + ++ T+ ++L + + KQ+H + +K ++ + +
Sbjct: 406 LPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN 465
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+ +D Y K + DA+ +F I K+++SWN + +EAV M +M I P
Sbjct: 466 ATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITP 525
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+ +F+ A+ ACS + + G QIH + IK + V SL ++Y K G +E
Sbjct: 526 DDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE------ 579
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+R++F ++ +++ NA++AG+ ++ EA+
Sbjct: 580 -------------------------SSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQ 614
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMY 421
+ K VT IL+ C+G +GK+VH + ++ + + +L +Y
Sbjct: 615 LFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIY 674
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTF 480
K L A +M ++ W A+++GYA+ G + ++ SF M+ R + TF
Sbjct: 675 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SS 539
++L AC+++++ GK+IH + ++ + AL+++Y+KC + + FKE +
Sbjct: 735 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 794
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D++ NSMI+GF N EAL +F M++ IKPD +TF G+L+AC H G +
Sbjct: 795 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRH 854
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
FF MR YG+ P+L+HY C I L R G+++E ++ ++++PF P + CR +
Sbjct: 855 FFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 914
Query: 660 GYATLGEWAARRLNELNP 677
G+ AAR+L EL P
Sbjct: 915 KDEERGKIAARKLVELEP 932
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/643 (25%), Positives = 275/643 (42%), Gaps = 77/643 (11%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C+ + R++ ++V + VF ++ Y KCG++ +AR +FD +
Sbjct: 162 AVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC 221
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
D W++M+ Y + G L LF M+ G + +Q+T ++ + A L
Sbjct: 222 PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRL------ 275
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
A + + + V+WN ++ + +G
Sbjct: 276 -----------------------------DHATALLKKMPTPSTVAWNAVISGHAQSGLE 306
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ ++ M + P TFA+ L A + + + EG Q+H + + + V SL
Sbjct: 307 FNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSL 366
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y KCG DA+ + D E+NI+ W N
Sbjct: 367 INLYAKCGCPSDAKNVFDLSCEKNIVMW-------------------------------N 395
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AML G+ ++ L +EA+ M + T D+ T IL C LS +GK+VH +N
Sbjct: 396 AMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN 455
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++FV+NA LDMY K G + A+ F + +D +SWNA+ G A+ + EEA+
Sbjct: 456 CMDISLFVANATLDMYSKYGAIGDAKALF-SLIPYKDSISWNALTVGLAQNLEEEEAVCM 514
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
M+ P +F T + AC+NI + E GKQIHC I+ N +L+++Y+K
Sbjct: 515 LKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK 574
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+E + ++F + + ++ N++I GF N EA+++F + K+G+KP +TF I
Sbjct: 575 HGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSI 634
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED---FVNRMP 641
L C N + Q K G++ + + L Y K LED + MP
Sbjct: 635 LSGCSGSLNSAIGKQVH-CYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMP 691
Query: 642 FNPTVPMLRKIFDKCRKNGY---ATLGEWAARRLNELNPWAPF 681
+ + I +NGY + + W R N + A F
Sbjct: 692 DHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 256/570 (44%), Gaps = 76/570 (13%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSAN 142
+E Y K G + A ER G+ +++L + ++G PG L F + +G +
Sbjct: 98 VELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPD 157
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
Q A VL + + L +Q+H +VK GF +V E++LVD Y KC + +ARR+FD
Sbjct: 158 QFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD 217
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I + + W+ ++ Y G +EA+ +F +M + P
Sbjct: 218 GIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP-------------------- 257
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
D V L ++ GRL+ A LL + + ++W +++SG+A
Sbjct: 258 ---------------DQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQ 302
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
SG L+ +M SW LW + T +
Sbjct: 303 SGLEFNVLGLYKDMR-----SWG----------LWPT----------------RSTFASM 331
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ A + G+++H + +N+FV ++L+++Y KCG A+ F +S ++
Sbjct: 332 LSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKN 390
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
V WNA+LTG+ + EEA+ F M++ + +FTF ++L AC +SS GKQ+HC
Sbjct: 391 IVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHC 450
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+NC +I++ A +++Y+K + A +F D I N++ +G N E
Sbjct: 451 VTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEE 510
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYE 618
A+ + M+ GI PD ++F + AC N++ A + + C KYGI
Sbjct: 511 AVCMLKRMRLHGITPDDVSFSTAINAC---SNIR-ATETGKQIHCLAIKYGICSNHAVGS 566
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+I LY ++G ++ ++ + VP+
Sbjct: 567 SLIDLYSKHGDVESSRKIFAQVDASSIVPI 596
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 7/213 (3%)
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ +HG I R + ++L+++Y K G + A +R + +++L+ +AR
Sbjct: 76 RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHAR 134
Query: 456 RGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G + + +F ++ RP +F +L+AC+ + L G+Q+HC V+++ + +V
Sbjct: 135 SGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 194
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG--REALEVFGLMKK 571
C ALV++Y KC + A RVF + D I +SMI C++ G +EAL +F M K
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIA--CYHRVGCYQEALALFSRMDK 252
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
G PD +T I+ G + A M
Sbjct: 253 MGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD- 373
S+V Y SGR+ A ER + +++L+ + RS + L +R T
Sbjct: 96 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
DQ L ++L+ C+ + + G++VH + ++ +SS++F AL+DMY KCG++ +AR
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 215
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F ++ D + W++++ Y R G +EA+ FS M + + P + T T+++ A+
Sbjct: 216 FDGIAC-PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274
Query: 493 LEQGKQI 499
L+ +
Sbjct: 275 LDHATAL 281
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 306/582 (52%), Gaps = 37/582 (6%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ Y+ G G LE++ M GV + T+ VL++ A+ E+ +++HG +V
Sbjct: 10 WNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG-NGKEAV 229
K GF +V + ++L+ YG C + DA R+FD++ K+ VSWN ++ + V G + ++A+
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
MF M+ E ++P + T ++ L L G ++HG I++ E D + SL +MY
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
K SG EA +F ++ +NV+SWNAM+A
Sbjct: 189 AK-------------------------------SGHSTEASNVFYKLDAKNVVSWNAMIA 217
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ ++ A+ V M+ + + VT +L CA + ++ GKE+H +
Sbjct: 218 NFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAF 277
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++FVSNAL DMY K G+L+ AR F + RD+VS+N ++ G+++ E+++ FSEM
Sbjct: 278 DLFVSNALTDMYAKSGHLKLARNVFD--TSLRDEVSYNILIVGHSQTSDCSESLSLFSEM 335
Query: 470 Q-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
Q + +F L+ACAN+++++QGK+IH F++R + I++ +L++ YTKC +
Sbjct: 336 QLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRI 395
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A +F ++ DV N+MILG+ A+++F M+K+ ++ D ++F +L AC
Sbjct: 396 GLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSAC 455
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
H G ++ ++FD ++ + GI P HY CM+ L R G M+E + + +P P +
Sbjct: 456 SHGGLLEKGRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANI 514
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR G L WAA L EL P + + +N +
Sbjct: 515 WGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMY 556
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/545 (28%), Positives = 260/545 (47%), Gaps = 40/545 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + CA + + + R++ ++V VF+ N + YG CG L DA +FDEMP
Sbjct: 44 FPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMP 103
Query: 105 ERDGGSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
E+D SWN M+G ++ NG+ R L++F M G+ N IT ++ L E +
Sbjct: 104 EKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGR 163
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++HG ++ G ++ + +SL+D Y K T+A +F + KN VSWN ++ + A
Sbjct: 164 EVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANF--AQ 221
Query: 224 NGKE--AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
N E AV + +M P + TF N L AC+ + G +IH I + D V
Sbjct: 222 NRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFV 281
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+LT+MY K G L+ AR + D R+ +S+ ++ G++ + E+ LF+EM
Sbjct: 282 SNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEM----- 335
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
L G + D V+ L+ CA L+ IK GKE+HGF
Sbjct: 336 -----QLMGLKQ---------------------DNVSFMGALSACANLTAIKQGKEIHGF 369
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ R + ++FV+N+LLD Y KCG + AR F +M+ +D SWN ++ GY G+ +
Sbjct: 370 LLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTN-KDVASWNTMILGYGMLGELDT 428
Query: 462 AMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F M+ + +F +L+AC++ LE+G++ + E + +V+
Sbjct: 429 AIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVD 488
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+ + +E A + K + +LG C G L + +KP+H
Sbjct: 489 LLGRAGLMEEAAELIKGLPIVPDANIWGALLGAC-RIYGNLELAAWAAEHLFELKPEHSG 547
Query: 581 FHGIL 585
++ +L
Sbjct: 548 YYTLL 552
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 194/389 (49%), Gaps = 34/389 (8%)
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
A WN ++R Y +AG G + ++ +M+R +RP + TF L AC+ +G ++H
Sbjct: 6 TAFLWNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVH 64
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
G ++K+ FE D V +L Y CG L DA + D+ E++++SW +++ ++++G
Sbjct: 65 GSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNG--- 121
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
W+ +++ALD LM + +T+ L V
Sbjct: 122 ----------------WH-----------YRDALDMFRLMIDEGLKPNSITISSFLPVLV 154
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
L K G+EVHG R S+IF++N+L+DMY K G+ A FY++ ++ VSWN
Sbjct: 155 ELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDA-KNVVSWN 213
Query: 448 AVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
A++ +A+ A+ +MQ + P+ TF +L ACA + + GK+IH I
Sbjct: 214 AMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHM 273
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
++ AL ++Y K L+ A VF ++S D + N +I+G E+L +F
Sbjct: 274 GCAFDLFVSNALTDMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLF 332
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVK 595
M+ G+K D+++F G L AC + +K
Sbjct: 333 SEMQLMGLKQDNVSFMGALSACANLTAIK 361
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 166/367 (45%), Gaps = 26/367 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ ++ CA + +++ + + +F+ N + Y K G+L AR +FD
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-S 305
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD S+N ++ ++Q +L LF +M G+ + +++ L + A + K+
Sbjct: 306 LRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++++ F ++ + +SL+D Y KC + AR +FD + NK+ SWN ++ Y + G
Sbjct: 366 IHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGE 425
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+ +F M ++D+ + +F L ACS +G + + E +
Sbjct: 426 LDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYAC 485
Query: 285 LTEMYVKCGRLEDA----RGLLDQPDERNIISWTSIVSGYAISGRIR----EARELFNEM 336
+ ++ + G +E+A +GL PD NI W +++ I G + A LF
Sbjct: 486 MVDLLGRAGLMEEAAELIKGLPIVPDA-NI--WGALLGACRIYGNLELAAWAAEHLFELK 542
Query: 337 PERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
PE + + +L+ Y + W EA LM+ + G S +++G
Sbjct: 543 PEHS--GYYTLLSNMYAETGRWDEANRIRELMKSRG-----------VKKSPGCSWVQIG 589
Query: 396 KEVHGFI 402
++ H F+
Sbjct: 590 EQAHAFV 596
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 300/603 (49%), Gaps = 34/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+F+ N + YG G +D+AR +FDE ER+ SWN ++ AY +N +++F +M
Sbjct: 135 IFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMV 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
GV N+ ++ V+ + +L +++H ++++ G+ +V ++LVD Y K +
Sbjct: 195 WGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIR 254
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F + + VSWN + ++ G+ + A+ + +M + P FT ++ L AC+
Sbjct: 255 MAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G QIHG ++K + + D+ + L +MY K G L+D
Sbjct: 315 GSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDD------------------ 356
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A+++F+ +P+R+++ WNA+++G + EAL MRK D++
Sbjct: 357 -------------AKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVN 403
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ TL +L A L I ++VH + + S+ V N L+D Y KC L A F
Sbjct: 404 RTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFE 463
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ D +++ +++T ++ E+A+ F EM + P F +LL ACA++S+ E
Sbjct: 464 KHGSY-DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYE 522
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGKQ+H +I+ + +V ALV Y KC +E A F V+ ++MI G
Sbjct: 523 QGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLA 582
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G+ AL+VF M E I P+HIT +L AC H G V A ++F+SM+ +GI
Sbjct: 583 QHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTE 642
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CMI L R G + + + VN MPF + + R + LG AA +L
Sbjct: 643 EHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFI 702
Query: 675 LNP 677
L P
Sbjct: 703 LEP 705
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/534 (27%), Positives = 254/534 (47%), Gaps = 44/534 (8%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
A + A L+S L + N + Y KC AR +FDE+P+ SW++++
Sbjct: 24 AHIHAHLLKSGLFAVFR-------NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
AY+ N P L F M V N+ VL+ + + G QLH L + G G
Sbjct: 77 AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDA---GFGTQLHALAMATGLGG 133
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
++ + ++LV YG + +AR +FD+ +N VSWN ++ Y+ AV +F +M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ ++P F F+ + AC+ G ++H ++I+ ++ D +L +MY K G +
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
A + + E +++SW + +SG + G + A EL +M ++
Sbjct: 254 RMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP------------ 301
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+ TL IL CAG +G+++HGF+ + + S+ +++
Sbjct: 302 -------------------NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAF 342
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-R 474
L+DMY K G L A+ F + Q RD V WNA+++G + Q EA++ F M+ E
Sbjct: 343 GLVDMYAKHGLLDDAKKVFDWIPQ-RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFD 401
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
++ T +L + A++ ++ +Q+H + + + L++ Y KC CL YA RV
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV 461
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
F++ S D+I SMI + G +A+++F M ++G+ PD +L AC
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 212/448 (47%), Gaps = 33/448 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S+ + RK+ + ++ VF N ++ Y K G++ A +F ++PE D SW
Sbjct: 212 CTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSW 271
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NA + +G LEL L M SG+ N T +++L++ A + +Q+HG +VK
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVK 331
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+ + LVD Y K ++ DA+++FD I ++ V WN ++ EA+ +
Sbjct: 332 ANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSL 391
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M +E T A L + + L + + Q+H + K+ F D V+ L + Y K
Sbjct: 392 FCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWK 451
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
C L A + ++ +II++TS+++ + +A +LF EM + +
Sbjct: 452 CDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGL---------- 501
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
D D L +LN CA LS + GK+VH + + + S++
Sbjct: 502 ---------------------DPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDV 540
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
F NAL+ Y KCG++ A + F + + + VSW+A++ G A+ G + A+ F M
Sbjct: 541 FAGNALVYTYAKCGSIEDADLAFSGLPE-KGVVSWSAMIGGLAQHGHGKRALDVFHRMVD 599
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQ 498
E P+ T ++L AC + +++ K+
Sbjct: 600 EHISPNHITMTSVLCACNHAGLVDEAKR 627
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 153/294 (52%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA S A R++ +V ++ ++ Y K G LDDA+ +FD +P+RD
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRD 368
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WNA++ + L LF M G N+ T A VL+S+A + ++Q+H
Sbjct: 369 LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHA 428
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
L K GF + + + L+D+Y KC + A R+F+ + + +++ ++ +G++
Sbjct: 429 LAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGED 488
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +MLR+ + P F ++ L AC+ LS+ +G Q+H +IK F D +L
Sbjct: 489 AIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVY 548
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
Y KCG +EDA E+ ++SW++++ G A G + A ++F+ M + ++
Sbjct: 549 TYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHI 602
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 155/314 (49%), Gaps = 5/314 (1%)
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR +F+E+P+ +SW++++ Y+ + + ++AL MR + ++ L ++L CA
Sbjct: 56 ARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CA- 113
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+ G ++H +IFV+NAL+ MY G + AR+ F + R+ VSWN
Sbjct: 114 -PDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNG 172
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++ Y + + A+ F EM W +P++F F ++ AC LE G+++H VIR
Sbjct: 173 LMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTG 232
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
Y+ +V ALV++Y+K + A VF + DV+ N+ I G + + ALE+
Sbjct: 233 YDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLL 292
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK G+ P+ T IL AC G L Q M + ++ +Y ++
Sbjct: 293 QMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKH 351
Query: 628 GYMKELEDFVNRMP 641
G + + + + +P
Sbjct: 352 GLLDDAKKVFDWIP 365
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 173/371 (46%), Gaps = 22/371 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V+ + A + + AS +AI + R++ + ++N I+ Y KC L+ A +
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV 461
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F++ D ++ +M+ A +Q ++LF++M G+ + +++L + A
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAY 521
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
KQ+H ++KR F +V ++LV Y KC + DA F + K VSW+ ++
Sbjct: 522 EQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGL 581
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGD 278
G+GK A+ +F +M+ E I P + T + L AC+ E + + ++ E
Sbjct: 582 AQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERT 641
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAIS-----GRIREAREL 332
+ + ++ + G+L+DA L++ P + N W ++++ + GR+ A +L
Sbjct: 642 EEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRL-AAEKL 700
Query: 333 FNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
F PE++ + +LA Y + +W D V +RK KD + +S
Sbjct: 701 FILEPEKS--GTHVLLANTYASAGMW----DDVAKVRKLMKDSK-------VKKEPAMSW 747
Query: 392 IKMGKEVHGFI 402
+++ +VH FI
Sbjct: 748 VELKDKVHTFI 758
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T LL A SL QG IH ++++ + V R L+ Y+KC A RVF E
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKS--GLFAVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
+ +S++ + +N R+AL F M+ ++ + ++L C + L
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVL-PVVLKCAPDAGFGTQL 122
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
++ G+ + ++ +Y +G++ E
Sbjct: 123 H---ALAMATGLGGDIFVANALVAMYGGFGFVDE 153
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 256/468 (54%), Gaps = 33/468 (7%)
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-L 285
EAV + R +R + T A+ L C+ + EG ++H + + L + L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY KCG+ +AR + D+ RN+ SW +++SGYA G I+ AR+LF++MPE++V+SWN
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M+ + + W EAL F R+ + + +L VC L E+ + ++VHG I
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------------- 440
+ SN+ +S+++LD Y KCG + AR F +MS R
Sbjct: 222 GFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELF 281
Query: 441 -----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
++ VSW A+++GYAR G +A+ F++M + RP +FTF + L ACA+I+SL+
Sbjct: 282 VEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLK 341
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGF 553
GKQIH +++R ++ N + AL+++Y+KC L +VF + LDV++ N++I
Sbjct: 342 HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISAL 401
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G EA+++ M + G KPD ITF IL AC H G V+ L FF+SM C YGI+P
Sbjct: 402 AQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPS 461
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
EHY C+I L R G +E+ D + +MP+ P + + CR +G+
Sbjct: 462 QEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGH 509
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 179/316 (56%), Gaps = 1/316 (0%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++++ Y K ++ AR++FD + K+ VSWN +V + G EA+ + + + I+
Sbjct: 130 NNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQ 189
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
F+FA L C L Q+HG I+ F + V+ S+ + YVKCG + DAR L
Sbjct: 190 CNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKL 249
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D+ R++++WT++VSGYA G ++ A ELF EMPE+N +SW A+++GY R+ + +AL
Sbjct: 250 FDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKAL 309
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ M DQ T L CA ++ +K GK++H ++ R ++ N V +AL+DMY
Sbjct: 310 ELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMY 369
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
KCG+L R F M + D V WN +++ A+ G EEA+ +M + +P K TF
Sbjct: 370 SKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITF 429
Query: 481 ETLLAACANISSLEQG 496
+L AC++ ++QG
Sbjct: 430 VVILNACSHSGLVQQG 445
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 192/386 (49%), Gaps = 68/386 (17%)
Query: 46 AHLFQLCASSKAIVEARKLESNL-VTFYPTPPVFLLNRAIECYGKCGN------------ 92
A L Q CA S+A+ E +++ +L +T P FL N I Y KCG
Sbjct: 63 ASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMS 122
Query: 93 -------------------LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+ AR LFD+MPE+D SWN M+ A+ Q G+ L + +
Sbjct: 123 ARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSE 182
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G+ N ++A VL + E+G+++Q+HG I+ GF NV+L SS++DAY KC +
Sbjct: 183 FRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGL 242
Query: 194 MTDARRMFDDIQ-------------------------------NKNAVSWNVIVRRYLVA 222
M DAR++FD++ KN VSW ++ Y
Sbjct: 243 MGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARN 302
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G G +A+ +F KM+ +RP FTF++ L AC+ ++S G QIH +++I+F+ + +V+
Sbjct: 303 GMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVV 362
Query: 283 GSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEM----P 337
+L +MY KCG L R + D ++ +++ W +I+S A G EA ++ ++M
Sbjct: 363 SALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGA 422
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDF 363
+ + I++ +L + S L ++ L+F
Sbjct: 423 KPDKITFVVILNACSHSGLVQQGLNF 448
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 50/330 (15%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD--- 101
+A + +C K + R++ ++ V L + ++ Y KCG + DAR LFD
Sbjct: 195 FAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMS 254
Query: 102 ----------------------------EMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
EMPE++ SW A++ Y +NG + LELF
Sbjct: 255 ARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTK 314
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M V +Q T+++ L + A L KQ+H +++ F N I+ S+L+D Y KC
Sbjct: 315 MMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGS 374
Query: 194 MTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ R++FD + NK + V WN I+ G G+EA+ M M+R +P TF L
Sbjct: 375 LGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILN 434
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYVKCGRLEDARGLLD--- 303
ACS + G+ G+ D ++ S L ++ + G E+ L+
Sbjct: 435 ACS-----HSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMP 489
Query: 304 -QPDERNIISWTSIVSGYAISGRIREAREL 332
+PD+R W +++ I G I L
Sbjct: 490 YKPDDR---VWNALLGVCRIHGHIERLDSL 516
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 295/603 (48%), Gaps = 34/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
VF+ N + YG G +DDAR +FDE ER+ SWN ++ AY +N G +++F +M
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
SG+ + ++ V+ + + +Q+H ++V+ G+ +V ++LVD Y K +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD 254
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F+ + + + VSWN ++ ++ G+ A+ + +M + P F ++ L AC+
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACA 314
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G QIHG +IK + + DD + L +MY K L+DA
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM---------------- 358
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++F+ M R++I WNA+++G + EA + +RK ++
Sbjct: 359 ---------------KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 403
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ TL +L A L ++VH + + + V N L+D Y KC L A I +
Sbjct: 404 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA-IRVF 462
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ D ++ +++T ++ E A+ F EM + P F +LL ACA++S+ E
Sbjct: 463 EECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 522
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGKQ+H +I+ + + ALV Y KC +E A F V+ ++MI G
Sbjct: 523 QGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLA 582
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G+ ALE+FG M EGI P+HIT +L AC H G V A ++F+SM+ +GI
Sbjct: 583 QHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTE 642
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CMI L R G + + + VN MPF + + R + LG+ AA +L
Sbjct: 643 EHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFI 702
Query: 675 LNP 677
L P
Sbjct: 703 LEP 705
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 273/540 (50%), Gaps = 43/540 (7%)
Query: 53 ASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
A+++A++ L +NL+ F + L N I Y KC AR +FDE+P+ S
Sbjct: 15 AAAQALLPGAHLHANLLKSGFLAS----LRNHLISFYSKCRRPCCARRVFDEIPDPCHVS 70
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W++++ AY+ NG P ++ F M GV N+ VL+ + +LG Q+H + +
Sbjct: 71 WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDAQLGA--QVHAMAM 127
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAV 229
GF +V + ++LV YG M DARR+FD+ +NAVSWN ++ Y+ +A+
Sbjct: 128 ATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAI 187
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F +M+ I+P F F+ + AC+ + G Q+H +++++ +E D +L +MY
Sbjct: 188 QVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMY 247
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
VK GR++ A + ++ + +++SW +++SG ++G A EL +M ++ ML+
Sbjct: 248 VKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLS 307
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
IL CAG +G+++HGF+ + + S
Sbjct: 308 S-------------------------------ILKACAGAGAFDLGRQIHGFMIKANADS 336
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ ++ L+DMY K L A F MS RD + WNA+++G + G+ +EA + F +
Sbjct: 337 DDYIGVGLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGL 395
Query: 470 QWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ E ++ T +L + A++ + +Q+H + + + L++ Y KC CL
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCL 455
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
AIRVF+E SS D+I SMI + G A+++F M ++G++PD +L AC
Sbjct: 456 SDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 217/462 (46%), Gaps = 34/462 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P + ++ + C S+ I R++ + +V VF N ++ Y K G +D A
Sbjct: 199 QPTEFG-FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F++MP+ D SWNA++ NG R +EL L M SG+ N +++L++ A
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +Q+HG ++K + + LVD Y K + DA ++FD + +++ + WN ++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G EA +F+ + +E + T A L + + L + Q+H + KI F
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ L + Y KC L DA + ++ +II+ TS+++ + A +LF EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + + D L +LN CA LS + GK+
Sbjct: 498 RKGL-------------------------------EPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + + S+ F NAL+ Y KCG++ A + F + + R VSW+A++ G A+ G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE-RGVVSWSAMIGGLAQHG 585
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F M E P+ T ++L AC + +++ K+
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 163/330 (49%), Gaps = 4/330 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ + + + CA + A R++ ++ ++ ++ Y K LDDA +FD M
Sbjct: 305 MLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWM 364
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
RD WNA++ + G +F + G+ N+ T A VL+S+A ++
Sbjct: 365 SHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATR 424
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H L K GF + + + L+D+Y KC ++DA R+F++ + + ++ ++
Sbjct: 425 QVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCD 484
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+G+ A+ +F +MLR+ + P F ++ L AC+ LS+ +G Q+H +IK F D
Sbjct: 485 HGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER---- 339
+L Y KCG +EDA ER ++SW++++ G A G + A ELF M +
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
N I+ ++L + L EA + M++
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S Y+ R AR +F+E+P+ +SW++++ Y+ + L + A+ MR +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ L ++L + + ++G +VH + S++FV+NAL+ MY G + AR F
Sbjct: 103 EFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+ R+ VSWN +++ Y + Q +A+ F EM W +P++F F ++ AC +++
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID 219
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+Q+H V+R YE +V ALV++Y K ++ A +F++ DV+ N++I G
Sbjct: 220 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N A+E+ MK G+ P+ IL AC G L Q M
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 329
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 155/332 (46%), Gaps = 22/332 (6%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
++N I+ Y KC L DA +F+E D + +M+ A +Q ++LF++M G
Sbjct: 441 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 500
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + +++L + A KQ+H ++KR F + ++LV Y KC + DA
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F + + VSW+ ++ G+GK A+ +F +M+ E I P + T + L AC+
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 259 SPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSI 316
E + + ++ + + + ++ + G+L+DA L++ P + N W ++
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 680
Query: 317 VSGYAIS-----GRIREARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKT 370
+ + G++ A +LF PE++ + +LA Y S +W E V +RK
Sbjct: 681 LGASRVHKDPELGKL-AAEKLFILEPEKS--GTHVLLANTYASSGMWNE----VAKVRKL 733
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
KD + + +S +++ +VH FI
Sbjct: 734 MKDSN-------IKKEPAMSWVEVKDKVHTFI 758
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + L + L CAS A + +++ ++L+ F N + Y KCG+++
Sbjct: 499 KGLEPDPFVL-SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
DA F +PER SW+AM+G Q+G R LELF M G++ N IT +VL
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/591 (29%), Positives = 302/591 (51%), Gaps = 35/591 (5%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M R+ +W +++ Y + L + +M+ SG + N+ T + +L++ +
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q H ++K GF NV++ +SL+ Y + + DA ++FD + K+ +N ++ Y A
Sbjct: 61 QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
GNG++A+ +F ML ++P ++TF N + AC EG Q G+ K F + +
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
++ MY K G REA +F+ M +RN+I
Sbjct: 181 NAIINMYGK-------------------------------KGMAREAERMFSAMTDRNLI 209
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SW A+++GYTRS K+A+D + + D L IL+ C+ +++G ++HG +
Sbjct: 210 SWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLV 269
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR--RGQSE 460
+ Y+ + + AL+D+Y KCGNL SAR+ F +S +R S+NA+L G+ R E
Sbjct: 270 IKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKR-IASFNAILAGFMENSRDGEE 328
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+ + F+ + + +P TF LL+ AN S+L +G+ H + I+ +E ++ A++
Sbjct: 329 DPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVI 388
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y KC +E A R+F + D I N+MI + + +G + L +F M K+ PD I
Sbjct: 389 TMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEI 448
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
T IL AC + G + + F+ M KYGI P LEHY CM+ L R G++ E D +N+
Sbjct: 449 TILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIINK 508
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
PF+ + + R + + C+ G G+ A++ L EL+P + + +N +
Sbjct: 509 SPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLLELSPVEAGSYILVSNMY 559
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 215/454 (47%), Gaps = 31/454 (6%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
KS E ++ + + Q C+S + ++ ++ V + I Y +
Sbjct: 34 KSGEALNEHTCSVILQACSSPDYRIFGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFG 93
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA +FD M +D +N M+ Y + G + + +F++M ++G+ N T+ N++ +
Sbjct: 94 DAEKVFDSMACKDVRCFNFMILEYARAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACD 153
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+L + +Q GL K GF + +++++ YGK + +A RMF + ++N +SW
Sbjct: 154 GDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTA 213
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y +G+GK+AV F ++ + + L CS + G+QIHG++IK+
Sbjct: 214 LISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLG 273
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ + +L ++Y KCG L AR + D + I S+ +I++G+ + R E
Sbjct: 274 YACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGE------ 327
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
E ++ +N R D VT +L++ A S +
Sbjct: 328 ---EDPIVLFNH--------------------FRLDGIKPDMVTFSRLLSLSANHSTLGR 364
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G+ H + + + +++ V+NA++ MY KCG++ A F M+ D +SWNA+++ YA
Sbjct: 365 GRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMND-HDSISWNAMISAYA 423
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAAC 487
GQ + + F EM + E P + T ++L AC
Sbjct: 424 LHGQGAKVLLLFEEMIKKEFAPDEITILSILQAC 457
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 172/339 (50%), Gaps = 11/339 (3%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+ + ++ C I E + + + N I YGK G +A
Sbjct: 139 QPNDYT-FTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMAREAE 197
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE-- 155
+F M +R+ SW A++ YT++G + ++ F++++ GV+ + +L +E
Sbjct: 198 RMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECR 257
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LELG+ Q+HGL++K G+ V + ++LVD Y KC + AR +FD + +K S+N I
Sbjct: 258 NLELGL--QIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAI 315
Query: 216 VRRYLV-AGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
+ ++ + +G+E ++ F R D I+P TF+ L + S+ G H IK
Sbjct: 316 LAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKT 375
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
FE D V ++ MY KCG +E+A + + ++ + ISW +++S YA+ G+ + LF
Sbjct: 376 GFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLF 435
Query: 334 NEMPER----NVISWNAMLAGYTRSLLWKEALDFVFLMR 368
EM ++ + I+ ++L T S L+++ + +M
Sbjct: 436 EEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVME 474
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 185/633 (29%), Positives = 309/633 (48%), Gaps = 42/633 (6%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C K + + R L + ++ + N I Y KC + A +FD + +D SW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 112 NAMLGAYTQNGFPGRTLELF-----LDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
N ++ A++Q +L + L M H + N T V +++ + +Q H
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
L VK +V SSL++ Y K ++ +AR +FD++ +NAVSW ++ Y
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199
Query: 227 EAVVMFFKMLREDIRPLN---FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA +F K++R + + N F F + L A + G Q+H + +K V
Sbjct: 200 EAFELF-KLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVAN 258
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MYVKCG LEDA + + +SG +N I+
Sbjct: 259 ALVTMYVKCGSLEDA------------------LKTFELSGN-------------KNSIT 287
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W+AM+ G+ + +AL + M ++ + + TL ++N C+ I G+++HG+
Sbjct: 288 WSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSL 347
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ Y ++V +AL+DMY KCG++ AR F + Q+ D V W +++TGY + G E A+
Sbjct: 348 KLGYELQLYVLSALVDMYAKCGSIVDARKGF-ECIQQPDVVLWTSIITGYVQNGDYEGAL 406
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ +MQ P+ T ++L AC+N+++L+QGKQ+H +I+ + + + AL +Y
Sbjct: 407 NLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMY 466
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L+ R+F + DVI N+MI G N RG E LE+F M EG KPD++TF
Sbjct: 467 AKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFV 526
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V +F M ++ I P +EHY CM+ + R G + E ++F+
Sbjct: 527 NLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATV 586
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ + + R + + + LG +A +L EL
Sbjct: 587 DHGLCLWRILLAASKNHRDYDLGAYAGEKLMEL 619
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H + P ++L + C+ + AIVE R++ + +++L+ ++ Y KCG+
Sbjct: 312 HQSGELPSEFTLVG-VINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGS 370
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ DAR F+ + + D W +++ Y QNG L L+ M GV N +T A+VL++
Sbjct: 371 IVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKA 430
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L KQ+H I+K F + + S+L Y KC + D R+F + ++ +SW
Sbjct: 431 CSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISW 490
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
N ++ G G E + +F KM E +P N TF N L ACS +
Sbjct: 491 NAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHM 535
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 211/764 (27%), Positives = 354/764 (46%), Gaps = 92/764 (12%)
Query: 14 SKSSPKPTPSKTLTKTISGHLK-------SDEP---VSYSLYAHLFQLCASSKAIVEARK 63
S S P PT K L K G+L+ S P Y + L A+ KA+ + +
Sbjct: 22 SISPPDPTSLKQLCK--EGNLRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQ 79
Query: 64 LESNLVTF--YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
+ ++ V FL + + YGKCG + DAR LFD M R SWNA++GAY +
Sbjct: 80 VHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSS 139
Query: 122 GFPGRTLELFLDMN---HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
G L ++ M SGV+ + T A+VL++S E + ++HGL VK G +
Sbjct: 140 GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ ++L+ Y KC ++ A R+F+ + + ++ SWN ++ L G +A+ +F M R
Sbjct: 200 FVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR 259
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+ ++T L C+ L+ G ++H ++K E ++ +L MY KCGR++
Sbjct: 260 AVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSE-VNIQCNALLVMYTKCGRVDS 318
Query: 298 A------------------------RGLLD--------------QPDERNIISWTSIVS- 318
A GL QPD I+S +S V
Sbjct: 319 ALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGH 378
Query: 319 -----------GYAISGR--------------------IREARELFNEMPERNVISWNAM 347
YAI R I + +F+ M ++ ISW +
Sbjct: 379 LGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTI 438
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ Y +S EAL+ +K +D + +G IL C+GL I + K++H + RN
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL 498
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++ V N ++D+Y +CG + + + ++ +++D V+W +++ YA G EA+ F+
Sbjct: 499 L-DLVVKNRIIDIYGECGEVYHS-LKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFA 556
Query: 468 EMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EMQ + +P ++L A +SSL +GK++H F+IR + + +LV++Y+ C
Sbjct: 557 EMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCG 616
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
L A++VF D+++ +MI + G++A+++F M + G+ PDH++F +L
Sbjct: 617 SLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLY 676
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H V + D M Y + P EHY C++ L R G +E +F+ MP P
Sbjct: 677 ACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKS 736
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + CR + L AA RL EL P P + + +N F
Sbjct: 737 VVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVF 780
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 178/638 (27%), Positives = 322/638 (50%), Gaps = 34/638 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A + AS A E +++ + V VF+ + I Y K G + DA+ +FD
Sbjct: 328 STFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 387
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
E++ WNAML + QN T+++F M + + A+ T+ +VL + L +
Sbjct: 388 STEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIG 447
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+H + +K ++ + ++++D Y K + A+ +F I K++VSWN ++
Sbjct: 448 RQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHN 507
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+EAV M +M I P +FA A+ ACS + + G QIH IK + + V
Sbjct: 508 EEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVG 567
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL ++Y K G +E +R +L D +++ ++++G + R EA ELF ++
Sbjct: 568 SSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQV------ 621
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ G+ S T IL+ C G +GK+VH +
Sbjct: 622 ----LKDGFKPS---------------------NFTFASILSGCTGPVSSVIGKQVHSYT 656
Query: 403 HRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
++ + + + +L+ +Y KC L A ++ ++ V W A ++GYA+ G S++
Sbjct: 657 LKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQ 716
Query: 462 AMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
++ F M+ + R + TF ++L AC+ I++L GK+IH +I++ + AL++
Sbjct: 717 SLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMD 776
Query: 521 VYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y+KC + + +FKE + +++ NSMI+GF N EAL +F M++ +KPD +
Sbjct: 777 MYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEV 836
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
T G+L+AC H G + FDSM YGI+P+++HY C+I L R G+++E ++ +++
Sbjct: 837 TLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQ 896
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+PF + C+ + G+ AA++L E+ P
Sbjct: 897 LPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEP 934
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 148/544 (27%), Positives = 252/544 (46%), Gaps = 68/544 (12%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C+ A+ + R++ +++ F ++ Y KC + DAR +FD +
Sbjct: 164 AVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIAC 223
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
D W +M+ Y + G + L LF M G + +Q+TY ++
Sbjct: 224 PDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTII--------------- 268
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
S + + G+ ++DAR + IQ + V+WN ++ Y +G
Sbjct: 269 -----------------STLASMGR---LSDARTLLKRIQMPSTVAWNAVISSYSQSGLE 308
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
E ++ M R+ + P TFA+ L A + +++ EG QIH +K + + V SL
Sbjct: 309 SEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSL 368
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+YVK G + DA+ + D E+NI+ W N
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMW-------------------------------N 397
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AML G+ ++ L +E + MR+ + D T +L C L + +G++VH +N
Sbjct: 398 AMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKN 457
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+++FV+NA+LDMY K G + A+ F + +D VSWNA++ G A + EEA+
Sbjct: 458 SMDADLFVANAMLDMYSKLGAIDVAKALF-SLIPGKDSVSWNALIVGLAHNEEEEEAVYM 516
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
M+ + P + +F T + AC+NI + E GKQIHC I+ N +L+++Y+K
Sbjct: 517 LKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSK 576
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+E + +V + ++ N++I G N R EA+E+F + K+G KP + TF I
Sbjct: 577 FGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASI 636
Query: 585 LLAC 588
L C
Sbjct: 637 LSGC 640
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/540 (24%), Positives = 248/540 (45%), Gaps = 76/540 (14%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+L + ++G P L+ F + S G + +Q A VL + + L +Q+H ++K
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
GFC + ++ LVD Y KC+ + DARR+FD I + + W ++ Y G ++A+ +F
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M + P T+ ++ +L M
Sbjct: 250 SRMEKMGSAPDQVTYVT-------------------------------IISTLASM---- 274
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
GRL DAR LL + + ++W +++S Y+ SG E L+ +M + ++ T
Sbjct: 275 GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMP--------T 326
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
RS T +L+ A ++ G+++H ++ +N+F
Sbjct: 327 RS-----------------------TFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVF 363
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QW 471
V ++L+++Y K G + A+ F S ++ V WNA+L G+ + EE + F M +
Sbjct: 364 VGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRA 422
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+ FTF ++L AC N+ SL+ G+Q+HC I+N + ++ A++++Y+K ++ A
Sbjct: 423 DLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVA 482
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+F D + N++I+G HNE EA+ + MK GI PD ++F + AC
Sbjct: 483 KALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINAC--- 539
Query: 592 GNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
N++ A + + C KY + +I LY ++G ++ + + + VP+
Sbjct: 540 SNIR-ATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPI 598
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 213/487 (43%), Gaps = 74/487 (15%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD--DIQNKNAVSWNVIVRRYLVA 222
LH +++ G L +LVD YG+ + A R + + + ++ + +
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 223 GNGKEAVVMFFKMLREDI--RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ ++ V+ F+ LR I P F A L ACS L + +G Q+H ++K F
Sbjct: 138 GSPRD-VLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAF 196
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
L +MY KC ++DAR +F+ + +
Sbjct: 197 CQAGLVDMYAKCVEVKDAR-------------------------------RVFDGIACPD 225
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
I W +M+AGY R +++AL M K DQVT I++ A +
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM----------- 274
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
G L AR ++ Q V+WNAV++ Y++ G
Sbjct: 275 ------------------------GRLSDARTLLKRI-QMPSTVAWNAVISSYSQSGLES 309
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
E + +M+ + P++ TF ++L+A A++++ ++G+QIH +++ + NV +L+
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLI 369
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y K C+ A +VF S+ ++++ N+M+ GF N+ E +++F M++ ++ D
Sbjct: 370 NLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDF 429
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF +L ACI+ ++ + Q + K + L M+ +Y + G + + +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVH-CITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSL 488
Query: 640 MPFNPTV 646
+P +V
Sbjct: 489 IPGKDSV 495
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 198/670 (29%), Positives = 329/670 (49%), Gaps = 48/670 (7%)
Query: 36 SDEPVSYSLYAHLFQLCASS-KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
S EP ++ HL SS K ++++ ++T + +F+ ++ I Y
Sbjct: 28 SHEPNDFNYLNHLLSNQISSLKTLLQSHAF---IITSGYSNNIFIASKLISLYASFHKPS 84
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ LFDE+P RD WN+++ A+ NG R L+ + M S N T ++ S A
Sbjct: 85 CSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCA 144
Query: 155 EELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E + + +HGL+ K G F G+ + SS V Y KC V+ +A +FD+I ++ V+W
Sbjct: 145 ELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWT 204
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLR---EDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+V + G K + +M R + RP T AC L + EG +HG++
Sbjct: 205 ALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLV 264
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K + VV L MY KCG E+A + ++IISWTS++S Y+ G E
Sbjct: 265 VKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECI 324
Query: 331 ELFNEM------PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
++F EM P+ VIS ML+ ++ S+ EA F L+ + +DQ+ +L+
Sbjct: 325 DMFWEMLVSGIYPDGIVIS--CMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLS 382
Query: 385 V----------------------------CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+ +G + + +H ++ +N N+ V+N+
Sbjct: 383 MYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNS 442
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RP 475
L+DMY K GNL AR F ++ RD V+WN +++ YA G EA++ + +M E +P
Sbjct: 443 LIDMYGKSGNLTIARRIFCRIP--RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKP 500
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
+ T ++L+AC++++SLE+G+++H ++ +E N+ AL+++Y KC LE + +F
Sbjct: 501 NSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIF 560
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
DVI N MI G+ + R A+E F M++ KP+ +TF +L AC H G VK
Sbjct: 561 NSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVK 620
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
F M+ Y + P L+HY CM+ L R G ++E E V MP +P + +
Sbjct: 621 EGKYLFGKMQ-DYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSS 679
Query: 656 CRKNGYATLG 665
C+ + +G
Sbjct: 680 CKIHNEIEMG 689
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 295/603 (48%), Gaps = 34/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
VF+ N + YG G +DDAR +FDE ER+ SWN ++ AY +N G +++F +M
Sbjct: 42 VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 101
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
SG+ + ++ V+ + + +Q+H ++V+ G+ +V ++LVD Y K +
Sbjct: 102 WSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVD 161
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F+ + + + VSWN ++ ++ G+ A+ + +M + P F ++ L AC+
Sbjct: 162 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACA 221
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G QIHG +IK + + DD + L +MY K L+DA
Sbjct: 222 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM---------------- 265
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++F+ M R++I WNA+++G + EA + +RK ++
Sbjct: 266 ---------------KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVN 310
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ TL +L A L ++VH + + + V N L+D Y KC L A I +
Sbjct: 311 RTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA-IRVF 369
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ D ++ +++T ++ E A+ F EM + P F +LL ACA++S+ E
Sbjct: 370 EECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 429
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGKQ+H +I+ + + ALV Y KC +E A F V+ ++MI G
Sbjct: 430 QGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLA 489
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G+ ALE+FG M EGI P+HIT +L AC H G V A ++F+SM+ +GI
Sbjct: 490 QHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTE 549
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CMI L R G + + + VN MPF + + R + LG+ AA +L
Sbjct: 550 EHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFI 609
Query: 675 LNP 677
L P
Sbjct: 610 LEP 612
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 229/457 (50%), Gaps = 37/457 (8%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M GV N+ VL+ + +LG Q+H + + GF +V + ++LV YG
Sbjct: 1 MRAEGVCCNEFALPVVLKC-VPDAQLGA--QVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 194 MTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
M DARR+FD+ +NAVSWN ++ Y+ +A+ +F +M+ I+P F F+ +
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
AC+ + G Q+H +++++ +E D +L +MYVK GR++ A + ++ + +++S
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W +++SG ++G A EL +M ++ ML+
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSS---------------------- 215
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
IL CAG +G+++HGF+ + + S+ ++ L+DMY K L A
Sbjct: 216 ---------ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 266
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANIS 491
F MS RD + WNA+++G + G+ +EA + F ++ E ++ T +L + A++
Sbjct: 267 VFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 325
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ +Q+H + + + L++ Y KC CL AIRVF+E SS D+I SMI
Sbjct: 326 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 385
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ G A+++F M ++G++PD +L AC
Sbjct: 386 ALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 422
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 217/462 (46%), Gaps = 34/462 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P + ++ + C S+ I R++ + +V VF N ++ Y K G +D A
Sbjct: 106 QPTEFG-FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 164
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F++MP+ D SWNA++ NG R +EL L M SG+ N +++L++ A
Sbjct: 165 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 224
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +Q+HG ++K + + LVD Y K + DA ++FD + +++ + WN ++
Sbjct: 225 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 284
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G EA +F+ + +E + T A L + + L + Q+H + KI F
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ L + Y KC L DA + ++ +II+ TS+++ + A +LF EM
Sbjct: 345 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 404
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + + D L +LN CA LS + GK+
Sbjct: 405 RKGL-------------------------------EPDPFVLSSLLNACASLSAYEQGKQ 433
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + + S+ F NAL+ Y KCG++ A + F + + R VSW+A++ G A+ G
Sbjct: 434 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE-RGVVSWSAMIGGLAQHG 492
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F M E P+ T ++L AC + +++ K+
Sbjct: 493 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 534
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 1/217 (0%)
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+ + ++G +VH + S++FV+NAL+ MY G + AR F + R+ VSWN
Sbjct: 20 VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNG 79
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++ Y + Q +A+ F EM W +P++F F ++ AC +++ G+Q+H V+R
Sbjct: 80 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG 139
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
YE +V ALV++Y K ++ A +F++ DV+ N++I G N A+E+
Sbjct: 140 YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 199
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
MK G+ P+ IL AC G L Q M
Sbjct: 200 QMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFM 236
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 169/371 (45%), Gaps = 22/371 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V+ + A + + AS +A R++ + ++N I+ Y KC L DA +
Sbjct: 309 VNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 368
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F+E D + +M+ A +Q ++LF++M G+ + +++L + A
Sbjct: 369 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 428
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
KQ+H ++KR F + ++LV Y KC + DA F + + VSW+ ++
Sbjct: 429 EQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 488
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGD 278
G+GK A+ +F +M+ E I P + T + L AC+ E + + ++ +
Sbjct: 489 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRT 548
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAIS-----GRIREAREL 332
+ + ++ + G+L+DA L++ P + N W +++ + G++ A +L
Sbjct: 549 EEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKL-AAEKL 607
Query: 333 FNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
F PE++ + +LA Y S +W E V +RK KD + + +S
Sbjct: 608 FILEPEKS--GTHVLLANTYASSGMWNE----VAKVRKLMKDSN-------IKKEPAMSW 654
Query: 392 IKMGKEVHGFI 402
+++ +VH FI
Sbjct: 655 VEVKDKVHTFI 665
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + L + L CAS A + +++ ++L+ F N + Y KCG+++
Sbjct: 406 KGLEPDPFVL-SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 464
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
DA F +PER SW+AM+G Q+G R LELF M G++ N IT +VL
Sbjct: 465 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 296/603 (49%), Gaps = 34/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
VF+ N + YG G +DDAR +F+E ER+ SWN ++ AY +N G +++F +M
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
SG+ + ++ V+ + + +Q+H ++V+ G+ +V ++LVD Y K +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F+ + + + VSWN ++ ++ G+ A+ + +M + P FT ++ L ACS
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACS 314
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G QIHG +IK + + DD + L +MY K L+DAR + D R++I +
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNA 374
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++SG + GR EA LF E +RK ++
Sbjct: 375 LISGCSHGGRHDEALSLFYE-------------------------------LRKEGLGVN 403
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ TL +L A L ++VH + + + V N L+D Y KC L A F
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ S D ++ +++T ++ E A+ F EM + P F +LL ACA++S+ E
Sbjct: 464 ECSS-GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 522
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGKQ+H +I+ + + ALV Y KC +E A F V+ ++MI G
Sbjct: 523 QGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLA 582
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G+ ALE+FG M EGI P+HIT +L AC H G V A ++F+SM+ +GI
Sbjct: 583 QHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTE 642
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CMI L R G + + + VN MPF + + R + LG+ AA +L
Sbjct: 643 EHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFI 702
Query: 675 LNP 677
L P
Sbjct: 703 LEP 705
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 272/538 (50%), Gaps = 39/538 (7%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A+++A++ L ++L+ N I Y KC AR +FDE+P+ SW+
Sbjct: 15 AAAQALLPGAHLHASLLK--SGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+++ AY+ NG P ++ F M GV N+ VL+ + LG Q+H + +
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARLGA--QVHAMAMAT 129
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVM 231
GF +V + ++LV YG M DARR+F++ + +NAVSWN ++ Y+ +A+ +
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M+ I+P F F+ + AC+ + G Q+H +++++ ++ D +L +MY+K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
GR++ A + ++ + +++SW +++SG ++G A EL +M ++
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP-------- 301
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ TL IL C+G +G+++HGF+ + + S+
Sbjct: 302 -----------------------NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDD 338
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++ L+DMY K L AR F M RD + NA+++G + G+ +EA++ F E++
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWMFH-RDLILCNALISGCSHGGRHDEALSLFYELRK 397
Query: 472 ETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E ++ T +L + A++ + +Q+H ++ + + L++ Y KC CL
Sbjct: 398 EGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSD 457
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A RVF+E SS D+I C SMI + G A+++F M ++G++PD +L AC
Sbjct: 458 ANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 222/462 (48%), Gaps = 34/462 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P + ++ + C S+ I R++ + +V VF N ++ Y K G +D A
Sbjct: 199 QPTEFG-FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F++MP+ D SWNA++ NG R +EL L M +SG+ N T +++L++ +
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +Q+HG ++K + + LVD Y K + DAR++FD + +++ + N ++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G EA+ +F+++ +E + T A L + + L + Q+H + +KI F
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ L + Y KC L DA + ++ +II+ TS+++ + A +LF EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + + D L +LN CA LS + GK+
Sbjct: 498 RKGL-------------------------------EPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + + S+ F NAL+ Y KCG++ A + F + + R VSW+A++ G A+ G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE-RGVVSWSAMIGGLAQHG 585
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F M E P+ T ++L AC + +++ K+
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 164/326 (50%), Gaps = 4/326 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C+ + A R++ ++ ++ ++ Y K LDDAR +FD M RD
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRD 368
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
NA++ + G L LF ++ G+ N+ T A VL+S+A ++Q+H
Sbjct: 369 LILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHA 428
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
L VK GF + + + L+D+Y KC ++DA R+F++ + + ++ ++ +G+
Sbjct: 429 LAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEG 488
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +MLR+ + P F ++ L AC+ LS+ +G Q+H +IK F D +L
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVIS 343
Y KCG +EDA ER ++SW++++ G A G + A ELF M + N I+
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRK 369
++L + L EA + M++
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 150/290 (51%), Gaps = 4/290 (1%)
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S Y+ R AR +F+E+P+ +SW++++ Y+ + L + A+ MR +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ L ++L + + ++G +VH + S++FV+NAL+ MY G + AR F
Sbjct: 103 EFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+ R+ VSWN +++ Y + Q +A+ F EM W +P++F F ++ AC ++E
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+Q+H V+R Y+ +V ALV++Y K ++ A +F++ DV+ N++I G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N A+E+ MK G+ P+ T IL AC G L Q M
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + L + L CAS A + +++ ++L+ F N + Y KCG+++
Sbjct: 499 KGLEPDPFVL-SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
DA F +PER SW+AM+G Q+G R LELF M G++ N IT +VL
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/603 (30%), Positives = 296/603 (49%), Gaps = 34/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
VF+ N + YG G +DDAR +F+E ER+ SWN ++ AY +N G +++F +M
Sbjct: 135 VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
SG+ + ++ V+ + + +Q+H ++V+ G+ +V ++LVD Y K +
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVD 254
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F+ + + + VSWN ++ ++ G+ A+ + +M + P FT ++ L ACS
Sbjct: 255 IASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACS 314
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G QIHG +IK + + DD + L +MY K L+DAR + D R++I +
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNA 374
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++SG + GR EA LF E +RK ++
Sbjct: 375 LISGCSHGGRHDEALSLFYE-------------------------------LRKEGLGVN 403
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ TL +L A L ++VH + + + V N L+D Y KC L A F
Sbjct: 404 RTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFE 463
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ S D ++ +++T ++ E A+ F EM + P F +LL ACA++S+ E
Sbjct: 464 ECSS-GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 522
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGKQ+H +I+ + + ALV Y KC +E A F V+ ++MI G
Sbjct: 523 QGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLA 582
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ G+ ALE+FG M EGI P+HIT +L AC H G V A ++F+SM+ +GI
Sbjct: 583 QHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTE 642
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CMI L R G + + + VN MPF + + R + LG+ AA +L
Sbjct: 643 EHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFI 702
Query: 675 LNP 677
L P
Sbjct: 703 LEP 705
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 271/538 (50%), Gaps = 39/538 (7%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A+++A++ L ++L+ N I Y KC AR FDE+P+ SW+
Sbjct: 15 AAAQALLPGAHLHASLLK--SGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWS 72
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+++ AY+ NG P ++ F M GV N+ VL+ + LG Q+H + +
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARLGA--QVHAMAMAT 129
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVM 231
GF +V + ++LV YG M DARR+F++ + +NAVSWN ++ Y+ +A+ +
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M+ I+P F F+ + AC+ + G Q+H +++++ ++ D +L +MY+K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
GR++ A + ++ + +++SW +++SG ++G A EL +M ++
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP-------- 301
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ TL IL C+G +G+++HGF+ + + S+
Sbjct: 302 -----------------------NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDD 338
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++ L+DMY K L AR F M RD + NA+++G + G+ +EA++ F E++
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWMFH-RDLILCNALISGCSHGGRHDEALSLFYELRK 397
Query: 472 ETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E ++ T +L + A++ + +Q+H ++ + + L++ Y KC CL
Sbjct: 398 EGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSD 457
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A RVF+E SS D+I C SMI + G A+++F M ++G++PD +L AC
Sbjct: 458 ANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 222/462 (48%), Gaps = 34/462 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P + ++ + C S+ I R++ + +V VF N ++ Y K G +D A
Sbjct: 199 QPTEFG-FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F++MP+ D SWNA++ NG R +EL L M +SG+ N T +++L++ +
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ +Q+HG ++K + + LVD Y K + DAR++FD + +++ + N ++
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G EA+ +F+++ +E + T A L + + L + Q+H + +KI F
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ L + Y KC L DA + ++ +II+ TS+++ + A +LF EM
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + + D L +LN CA LS + GK+
Sbjct: 498 RKGL-------------------------------EPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + + S+ F NAL+ Y KCG++ A + F + + R VSW+A++ G A+ G
Sbjct: 527 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE-RGVVSWSAMIGGLAQHG 585
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F M E P+ T ++L AC + +++ K+
Sbjct: 586 HGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 164/326 (50%), Gaps = 4/326 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C+ + A R++ ++ ++ ++ Y K LDDAR +FD M RD
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRD 368
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
NA++ + G L LF ++ G+ N+ T A VL+S+A ++Q+H
Sbjct: 369 LILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHA 428
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
L VK GF + + + L+D+Y KC ++DA R+F++ + + ++ ++ +G+
Sbjct: 429 LAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEG 488
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +MLR+ + P F ++ L AC+ LS+ +G Q+H +IK F D +L
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVY 548
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVIS 343
Y KCG +EDA ER ++SW++++ G A G + A ELF M + N I+
Sbjct: 549 TYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 608
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRK 369
++L + L EA + M++
Sbjct: 609 MTSVLCACNHAGLVDEAKRYFNSMKE 634
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S Y+ R AR F+E+P+ +SW++++ Y+ + L + A+ MR +
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ L ++L + + ++G +VH + S++FV+NAL+ MY G + AR F
Sbjct: 103 EFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+ R+ VSWN +++ Y + Q +A+ F EM W +P++F F ++ AC ++E
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+Q+H V+R Y+ +V ALV++Y K ++ A +F++ DV+ N++I G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N A+E+ MK G+ P+ T IL AC G L Q M
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFM 329
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + L + L CAS A + +++ ++L+ F N + Y KCG+++
Sbjct: 499 KGLEPDPFVL-SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIE 557
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
DA F +PER SW+AM+G Q+G R LELF M G++ N IT +VL
Sbjct: 558 DAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/648 (27%), Positives = 321/648 (49%), Gaps = 15/648 (2%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V+ + Y + + CA ++ + + + L ++L N I Y K ++ A +
Sbjct: 54 VNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQV 113
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F M RD +W++M+ AY N P + + F M + + N+IT+ ++L++ L
Sbjct: 114 FRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSIL 173
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+++H ++ G +V + ++L+ Y KC ++ A +F + +N VSW I++
Sbjct: 174 EKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQAN 233
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
EA ++ +ML+ I P TF + L +C+ + G +IH I + E D
Sbjct: 234 AQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDM 293
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG-----RIREARELFN 334
+V +L MY KC +++AR + D+ +R++ISW+++++GYA SG I E +L
Sbjct: 294 IVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLE 353
Query: 335 EMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
M V +++ ++L T ++ + K ++D+ I N+ A
Sbjct: 354 RMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCG 413
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
I ++V + + N+ + L MY KCG+L SA F +M R+ VSWN ++
Sbjct: 414 SIYEAEQVFSKM----ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT-RNVVSWNLMI 468
Query: 451 TGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
GYA+ G + S M+ E +P + T T+L AC ++ LE+GK +H ++ E
Sbjct: 469 AGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLE 528
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+ V +L+ +Y+KC + A VF + S+ D + N+M+ G+ + G EA+++F M
Sbjct: 529 SDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRM 588
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
KE + P+ IT ++ AC G V+ + F M+ + + P+ +HY CM+ L R G
Sbjct: 589 LKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGR 648
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++E E+F+ MP P + + + C+ + L E AA + EL P
Sbjct: 649 LQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEP 696
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 160/623 (25%), Positives = 266/623 (42%), Gaps = 102/623 (16%)
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
++L + G+ N TY V+ A+ K +H + + G ++ L +SL++
Sbjct: 41 IQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINF 100
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K + A ++F + ++ V+W+ ++ Y + +A F +M +I P TF
Sbjct: 101 YSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITF 160
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+ L AC+ S +G +IH ++ + E D V +L MY KCG + A + + E
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE 220
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
RN++SWT+I+ A ++ EA EL+ +M + IS NA
Sbjct: 221 RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG-ISPNA--------------------- 258
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
VT +LN C + G+ +H I +++ V+NAL+ MY KC ++
Sbjct: 259 ---------VTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSV 309
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRG-QSEEAMTSFSEMQWETR-----PSKFTFE 481
+ AR F +MS +RD +SW+A++ GYA+ G + +E++ ++ R P+K TF
Sbjct: 310 QEAREIFDRMS-KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFM 368
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEI------------------------------- 510
++L AC +LEQG+QIH + + +E+
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK 428
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
NVV + + +Y KC L A +VF E + +V+ N MI G+ N + E+ MK
Sbjct: 429 NVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMK 488
Query: 571 KEGIKPDHITFHGILLAC-----------IHEGNVKLALQ-------FFDSMRCKYGIIP 612
EG +PD +T IL AC +H VKL L+ M K G +
Sbjct: 489 AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVA 548
Query: 613 QLE------------HYECMIKLYCRYGYMKELEDFVNRM---PFNPTVPMLRKIFDKCR 657
+ + M+ Y ++G E D RM +P L + C
Sbjct: 549 EARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACS 608
Query: 658 KNGYATLGEWAARRLNELNPWAP 680
+ G G R + E P
Sbjct: 609 RAGLVQEGREIFRMMQEDFKMTP 631
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 223/541 (41%), Gaps = 92/541 (17%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L C + +A+ R++ S++ + + N I Y KC ++ +AR +FD M
Sbjct: 261 FVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMS 320
Query: 105 ERDGGSWNAMLGAYTQNGFPGR-----TLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
+RD SW+AM+ Y Q+G+ + +L M GV N++T+ ++LR+ L
Sbjct: 321 KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGAL 380
Query: 160 GVSKQLHGLIVKRGF----------------CG---------------NVILESSLVDAY 188
+Q+H + K GF CG NV+ +S + Y
Sbjct: 381 EQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMY 440
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
KC ++ A ++F ++ +N VSWN+++ Y G+ + + M E +P T
Sbjct: 441 IKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVI 500
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L AC L+ G +H +K+ E D VV SL MY KC
Sbjct: 501 TILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKC---------------- 544
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
G++ EAR +F++M R+ ++WNAMLAGY + EA+D M
Sbjct: 545 ---------------GQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRML 589
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNL 427
K +++TL +++ C+ ++ G+E+ + + + ++D+ + G L
Sbjct: 590 KERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRL 649
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQ-------------- 470
+ A + M D W+A+L +E A E++
Sbjct: 650 QEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIY 709
Query: 471 -----WE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
W+ T+ + + L SS+E +IH FV +C + A +E T
Sbjct: 710 AQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLT 769
Query: 524 K 524
K
Sbjct: 770 K 770
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 200/431 (46%), Gaps = 39/431 (9%)
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V R AG +EA+ + + + + + T+ + C+ +G +H + ++
Sbjct: 28 VWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGV 87
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D + SL Y K + A + + R++++W+S+++ YA + +A + F
Sbjct: 88 EIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFER 147
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M + N+ + +++T IL C S ++ G
Sbjct: 148 MTDANI-------------------------------EPNRITFLSILKACNNYSILEKG 176
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++H + +++ V+ AL+ MY KCG + A F++M++ R+ VSW A++ A+
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE-RNVVSWTAIIQANAQ 235
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+ EA + +M Q P+ TF +LL +C +L +G++IH + E +++
Sbjct: 236 HRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIV 295
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE-RGREAL-EVFGL---M 569
AL+ +Y KC ++ A +F S DVI ++MI G+ + + +E++ EVF L M
Sbjct: 296 ANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERM 355
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
++EG+ P+ +TF IL AC G ++ Q + K G + +Y + G
Sbjct: 356 RREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGS 414
Query: 630 MKELEDFVNRM 640
+ E E ++M
Sbjct: 415 IYEAEQVFSKM 425
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/625 (30%), Positives = 312/625 (49%), Gaps = 47/625 (7%)
Query: 50 QLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
QLC +AR+L + P F ++ I Y K GNL AR +FD+ ER
Sbjct: 58 QLC-------QARQLLDQM----PNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVV 106
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS-KQLHGL 168
+W M+GAY+++ G +LF +M+ SG + +TY +L + +LE+ Q H
Sbjct: 107 AWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLL-TGCNDLEVAKELYQAHAQ 165
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
IVK G N + ++L+D+Y K + ARR+F ++ ++VS+NV++ Y G +EA
Sbjct: 166 IVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEA 225
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F +M +P +FTFA + A L G QIHG ++K F
Sbjct: 226 IELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFI------------ 273
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
RN+ + + Y+ + E R+LFNEMPE + +S+N ++
Sbjct: 274 -------------------RNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVII 314
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
Y KE++D ++ TT D +L++ A +++MG+++H + +
Sbjct: 315 TAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMAD 374
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ VSN+L+DMY KCG A F ++S R V W A+++ +RG E + F E
Sbjct: 375 PDFRVSNSLVDMYAKCGKFEEADRIFLRLSSR-STVPWTAMISANVQRGLHENGLKLFYE 433
Query: 469 MQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M+ + TF +L A AN++S+ GKQ+H VIR+ + +NV AL+++Y C
Sbjct: 434 MRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCAS 492
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ AI+ F+E S +V+ N+++ + N G+ L+ F M G +PD ++F IL A
Sbjct: 493 IKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTA 552
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C H V+ L++F+ M Y + P+ EHY M+ CR G E E + +MPF P
Sbjct: 553 CSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEI 612
Query: 648 MLRKIFDKCRKNGYATLGEWAARRL 672
+ + + CR + L AA +L
Sbjct: 613 VWTSVLNSCRIHKNYALARKAAGQL 637
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 248/566 (43%), Gaps = 68/566 (12%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H +P Y Y L C + E + + +V + N ++ Y K G
Sbjct: 132 HRSGSQP-DYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGG 190
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
LD AR LF EM D S+N M+ Y NG +ELF++M + G + T+A V+ +
Sbjct: 191 LDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
S + +Q+HG +VK F NV + ++ +D Y K + + R++F+++ + VS+
Sbjct: 251 SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSY 310
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
NVI+ Y G KE++ +F ++ NF F L + G Q+H ++
Sbjct: 311 NVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVV 370
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ D V SL +MY KCG+ E+A + + R+ + WT+++S G +L
Sbjct: 371 SMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKL 430
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F EM NV + DQ T +L A L+ I
Sbjct: 431 FYEMRRANVSA-------------------------------DQATFACVLKASANLASI 459
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+GK++H + R+ + N++ ALLDMY C +++ A F +MS+ R+ V+WNA+L+
Sbjct: 460 LLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSE-RNVVTWNALLSA 517
Query: 453 YARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
YA+ G + + SF EM +P +F +L AC++ +E+G +
Sbjct: 518 YAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYF----------- 566
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+ VY E+ +M+ C + R EA ++ G M
Sbjct: 567 ----NDMSGVYNLAPKREHY---------------TAMVDALCRSGRFDEAEKLMGQMPF 607
Query: 572 EGIKPDHITFHGILLACIHEGNVKLA 597
E PD I + +L +C N LA
Sbjct: 608 E---PDEIVWTSVLNSCRIHKNYALA 630
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 171/356 (48%), Gaps = 3/356 (0%)
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G+L AR LLDQ RN S I+SGY SG + AR +F++ ER V++W M+ Y+
Sbjct: 57 GQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYS 116
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+S + +A M ++ D VT +L C L K + H I + + N
Sbjct: 117 KSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHR 176
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-W 471
V N LLD Y K G L SAR F +M D VS+N ++TGYA G +EEA+ F EMQ
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLFLEMCG-WDSVSFNVMITGYANNGLNEEAIELFVEMQNL 235
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+PS FTF +++A + G+QIH FV++ + NV A ++ Y+K C+
Sbjct: 236 GFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEV 295
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
++F E LD + N +I + + +E++++F ++ + F +L
Sbjct: 296 RKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASS 355
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
++++ Q + P ++ +Y + G +E + R+ TVP
Sbjct: 356 LDLQMGRQLHAQVVVSMA-DPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVP 410
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 161/335 (48%), Gaps = 11/335 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + ASS + R+L + +V P + N ++ Y KCG ++A +F +
Sbjct: 345 FPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLS 404
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R W AM+ A Q G L+LF +M + VSA+Q T+A VL++SA + + KQ
Sbjct: 405 SRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQ 464
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH +++ GF NV +L+D Y C + DA + F+++ +N V+WN ++ Y G+
Sbjct: 465 LHSCVIRSGFM-NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGD 523
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
GK + F +M+ +P + +F L ACS EG++ + + +
Sbjct: 524 GKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYT 583
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREAR----ELFNEMPE 338
++ + + GR ++A L+ Q P E + I WTS+++ I AR +LFN
Sbjct: 584 AMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVL 643
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
R+ + M + + W D V ++K +D
Sbjct: 644 RDAAPYVTMSNIFAEAGQW----DSVVKVKKAMRD 674
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 317/658 (48%), Gaps = 65/658 (9%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
S LT+ GH+ E S++ YA+ Q C + L ++ +F N
Sbjct: 20 SAKLTQEFVGHVSPSEFNSHA-YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNI 78
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
+ Y K L DA LFDEMPER+ S+ ++ Y ++ +ELF+ ++ G N
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELN 138
Query: 143 QITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ +L+ S + ELG +H I K G N + ++L+DAY C + AR +
Sbjct: 139 PFVFTTILKLLVSMDCGELGWG--IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREV 196
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD I K+ VSW +V + KEA+ +F +M +P NFTFA+ AC L +
Sbjct: 197 FDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAF 256
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +HG +K +E D V +L ++Y K
Sbjct: 257 DVGKSVHGCALKSRYELDLYVGVALLDLYTK----------------------------- 287
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
SG I +AR F E+P+++VI W+ M+A Y +S KEA++ F MR+ +Q T
Sbjct: 288 --SGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFA 345
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L CA + + +G ++H + + S++FVSNAL+D+Y KCG + ++ F + R
Sbjct: 346 SVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHR 405
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
D WN V+ G+ + G E+A+ F M ++ + ++ T+ + L ACA++++LE G QI
Sbjct: 406 NDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQI 465
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H ++ ++ ++V AL+++Y KC ++ A VF + D + N+MI G+
Sbjct: 466 HSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGY------ 519
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
+ HG LAC + G + +F SM +GI P +EHY C
Sbjct: 520 --------------------SMHG--LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTC 557
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M+ L R G++ + ++ +PF P+V + R + C + LG +A+ + E+ P
Sbjct: 558 MVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEP 615
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKF---TFETLLAACANISSLEQGKQIHCFV 503
N L ++RRG S ++ E PS+F + L C +GK +HC +
Sbjct: 5 NNFLIRFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ +++ L+ +Y K L A ++F E + I ++I G+ + R EA+
Sbjct: 65 LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124
Query: 564 EVFGLMKKEGIKPDHITFHGIL 585
E+F + +EG + + F IL
Sbjct: 125 ELFVRLHREGHELNPFVFTTIL 146
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 197/657 (29%), Positives = 319/657 (48%), Gaps = 50/657 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L A L C+ + R++ S + L N I Y KCG+L DA+
Sbjct: 5 PNCHALIA-LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63
Query: 99 LFDEMP---ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSA 154
FD +P +RD +WNAM+ A+ +NG L+LF DM+H G N +T+ +VL S
Sbjct: 64 AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123
Query: 155 EE--LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF----DDIQNKN 208
E L L + +HG IV G + ++LVD+YGK + DA +F D+ + +
Sbjct: 124 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTS 183
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V+ + ++ G +E++ +F+ M E +P T + L ACS L
Sbjct: 184 LVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP---------- 233
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+GS T LE A ++ R+ + T++++ YA S +
Sbjct: 234 -------------VGSATAFV-----LEQAMEVVSAT--RDNVLGTTLLTTYARSNDLSR 273
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR F+ + +V+SWNAM A Y + +EAL M T L CA
Sbjct: 274 ARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAA 333
Query: 389 L---SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKV 444
+ +GK + + + V+NA L+MY KCG+L AR F ++S RRD +
Sbjct: 334 YPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCI 393
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCF 502
+WN++L Y G +EA F M+ E +P+K TF +L A + +S+ QG++IH
Sbjct: 394 TWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHAR 453
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS--LDVIICNSMILGFCHNERGR 560
V+ N +E + V + AL+ +Y KC L+ A +F +SSS DVI S++ G+ +
Sbjct: 454 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAE 513
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL++F M+++G++P+HITF L AC H G ++ + M +GI+P +H+ C+
Sbjct: 514 RALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCI 573
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G + E E + R + + + D C+ + GE A R+ +L+P
Sbjct: 574 VDLLGRCGRLDEAEKLLERTSQADVITWM-ALLDACKNSKELERGERCAERIMQLDP 629
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 158/364 (43%), Gaps = 48/364 (13%)
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
++RP + ACS L + G +IH I DFE + V+ +L MY KCG L DA
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 299 RGLLD---QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ D + +R++++W +++S + +G REA +LF +M N+
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNS--------- 112
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGKEVHGFIHRNDYSSNIFV 413
VT +L+ C AGL ++ + +HG I FV
Sbjct: 113 ---------------------VTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFV 151
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDK---VSWNAVLTGYARRGQSEEAMTSFSEMQ 470
AL+D Y K G+L A F + S V+ +A+++ + G +E++ F M
Sbjct: 152 RTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMN 211
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-----ALVEVYTK 524
E T+PS T ++L AC S L G FV+ E+ R L+ Y +
Sbjct: 212 LEGTKPSGVTLVSVLNAC---SMLPVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYAR 267
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
L A F S DV+ N+M + + R REAL +F M EG++P TF
Sbjct: 268 SNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITA 327
Query: 585 LLAC 588
L AC
Sbjct: 328 LTAC 331
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
E RP+ L+ AC+ + +L G++IH + +E N V AL+ +Y+KC L A
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 532 IRVFK---ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLA 587
+ F +S DV+ N+MI F N REAL++F M +G P+ +TF +L +
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121
Query: 588 CIHEGNVKLALQFFDSMRCKYG-IIPQLEHYECMIK--LYCRYGYMKELED----FVNRM 640
C+ G + L + +R +G I+ E ++ L YG + L+D F+ +
Sbjct: 122 CVEAGLLSL-----EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKS 176
Query: 641 PFNPTVPML--RKIFDKCRKNGY 661
P+ ++ + C +NG+
Sbjct: 177 DEEPSTSLVTCSAMISACWQNGW 199
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/662 (27%), Positives = 321/662 (48%), Gaps = 42/662 (6%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ P S + + + C + + + R++ + +V V + N + Y +C +
Sbjct: 309 LEGTAPNSVT-FVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSW 367
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQITYANVLRS 152
+D+R LFD M RD SW+ ++ A ++ R L L+ M H GV + + VL +
Sbjct: 368 EDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEA 427
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
EL K +H +++ G G+++ SLV+ Y KC + +AR++FD I N++ + W
Sbjct: 428 CGSLAELKGGKLVHAHVIESGLEGDLV-GISLVNMYAKCGTVGEARKVFDRINNRSRILW 486
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ Y + EA+ +F +M E + P TF L AC + G IH I+
Sbjct: 487 NSMITAYQ-EKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVD 545
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F D V +L MY KCG L EAR +
Sbjct: 546 SGFAADVRVATALFNMYAKCGSLG-------------------------------EARGV 574
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+ M R+V+SWN M+A Y + + A+ + M+ D+ T +LN C+ + +
Sbjct: 575 FDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRL 634
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR-----IWFYQMSQRRDKVSWN 447
G+++H +I + ++I + L+ MY CG+L +AR I+ RD W
Sbjct: 635 VDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWT 694
Query: 448 AVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+++T Y + G+ +A+ + +M + + TF ++L ACA++S L QG+ IH V+R
Sbjct: 695 SMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRR 754
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+V ++V +Y KC + A VF+++ D+ + ++I + + G +AL +F
Sbjct: 755 GLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIF 814
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
++++GI+ ++TF +L AC H G ++ +FF SM + GI P +EH+ C++ L R
Sbjct: 815 RRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASM-AELGIEPNMEHHSCLVDLLAR 873
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G++ E+F++RMP +L + CR +G A +L L+P + +
Sbjct: 874 AGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTL 933
Query: 687 TN 688
+N
Sbjct: 934 SN 935
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/617 (27%), Positives = 283/617 (45%), Gaps = 48/617 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + L C A+ E + ++ L + + N I Y KCG LD A
Sbjct: 7 PPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQ 66
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
F M RD SW M+GAY+Q+G +L+LF +M G + N +T+ ++L
Sbjct: 67 TFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSL 126
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR-RMFDDIQNKNAVSWNVIVR 217
L +Q+H L+V+ +V++ +SL+ Y +C D+R + F ++ ++ VSW V++
Sbjct: 127 LEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIG 186
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G ++ +F +ML E P + TF + L C S +G QIH ++++ E
Sbjct: 187 AYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLES 246
Query: 278 --DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D VL MYVKCG L+ A + F
Sbjct: 247 HLDIGVLNLTINMYVKCGCLDGAV-------------------------------QTFAR 275
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M R+V+SW M+ Y++ + +L M + VT IL+ C S ++ G
Sbjct: 276 MKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 335
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++H + + S++ V+N+LL MY +C + +R F +MS R D VSW+ ++ +R
Sbjct: 336 RQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVR-DSVSWSTIIMACSR 394
Query: 456 R-GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+A+ + M E P +L AC +++ L+ GK +H VI + E ++V
Sbjct: 395 EDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLV 454
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+LV +Y KC + A +VF ++ I+ NSMI + + EAL +F M+ EG
Sbjct: 455 GI-SLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEG 512
Query: 574 IKPDHITFHGILLACIHEGNVK----LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ PD ITF +L AC++ +++ + + DS G + + +Y + G
Sbjct: 513 VSPDRITFMTVLNACVNAADLENGRTIHTRIVDS-----GFAADVRVATALFNMYAKCGS 567
Query: 630 MKELEDFVNRMPFNPTV 646
+ E + M F V
Sbjct: 568 LGEARGVFDSMVFRDVV 584
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 34/357 (9%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M R I P L AC+ L + EG I + E D V MYVKCG
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L+ A + R+++SWT ++ Y+ G+ + +LF EM
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREM------------------ 102
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L+ T + VT IL+ C S ++ G+++H + + S++ V+
Sbjct: 103 -----------LLEGTAP--NSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVA 149
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-T 473
N+LL MY +C + +R+ + +RRD VSW ++ Y++ G+ ++ F EM E T
Sbjct: 150 NSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGT 209
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE--INVVCRGALVEVYTKCCCLEYA 531
P+ TF ++L+ C S LEQG+QIH V+ + E +++ + +Y KC CL+ A
Sbjct: 210 APNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGA 269
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
++ F DV+ MI + + + +L++F M EG P+ +TF IL C
Sbjct: 270 VQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGC 326
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/642 (29%), Positives = 318/642 (49%), Gaps = 44/642 (6%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
++ L + C S+ ++ + + +L+ + + L+N Y C ++ AR +FD
Sbjct: 1 MFLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLT-RLYASCNEVELARHVFD 59
Query: 102 EMPER--DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
E+P + +W+ M+ AY NGF + L+L+ M +SGV + TY VL++ A +
Sbjct: 60 EIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAI 119
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K +H + F ++ + ++LVD Y KC + A ++FD++ ++ V+WN ++ +
Sbjct: 120 EDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGF 179
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALF-ACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + + +F M R D N + +F A + EG +HG ++ F D
Sbjct: 180 SLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VV T I+ YA S I AR +F+ +
Sbjct: 240 LVV-------------------------------KTGILDVYAKSKCIIYARRVFDSDFK 268
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT---LGLILNVCAGLSEIKMG 395
+N ++W+AM+ GY + + KEA + VFL D+ VT +GLIL CA ++ G
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGE-VFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGG 327
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ VH + + + ++ V N ++ Y K G+L A F ++ + D VS+N++++G
Sbjct: 328 RCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLK-DIVSYNSLISGCVE 386
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
++EE+ F +M+ RP T +L AC+N+++L G H + + N Y +N
Sbjct: 387 NCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSI 446
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL+++YTKC L A RVF D++ N+M+ GF + G+EAL +F M+ G+
Sbjct: 447 CNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGV 506
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
PD +T IL AC H G V Q F+SM R + +IP+L+HY CM L R GY+ E
Sbjct: 507 HPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARAGYLDEA 566
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
DFVN+MPF P + +L + C LG ++++ L
Sbjct: 567 YDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSL 608
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 136/302 (45%), Gaps = 19/302 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K G+L DA F E+ +D S+N+++ +N + LF M SG+
Sbjct: 347 NTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIR 406
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T +L + + LG HG V G+ N + ++L+D Y KC + A+R+
Sbjct: 407 PDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRV 466
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ VSWN ++ + + G GKEA+ +F M + P T L ACS
Sbjct: 467 FDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLV 526
Query: 261 YEGMQIHGVIIKIDFEGDDVV-----LGSLTEMYVKCGRLEDARGLLD----QPDERNII 311
EG Q+ + + DF +V+ +T++ + G L++A ++ +PD R +
Sbjct: 527 DEGKQLFNSMSRGDF---NVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 312 SWTSIVSGYA---ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ S Y + + + + E E V+ N Y+ + W++A +
Sbjct: 584 TLLSACWTYKNVELGNEVSKKMQSLGETTESLVLLSNT----YSAAERWEDAAKIRMTQK 639
Query: 369 KT 370
K+
Sbjct: 640 KS 641
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/619 (29%), Positives = 308/619 (49%), Gaps = 38/619 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V+ N + Y KC L A LFDEMP RD SWN M+ + G + ++ M
Sbjct: 33 VYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRS 92
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G ++ T+ ++L+ A + +Q+H +I+K G+ NV S+L+D Y KC + D
Sbjct: 93 CGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLED 152
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A F I N VSWN ++ Y AG+ + A + M +E + + T+A L
Sbjct: 153 AYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDD 212
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
Q+HG IIK E + + +L Y KCG L+DA+ + D
Sbjct: 213 ADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS------------ 260
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL--MRKTTKDI 374
S IR+ +++WN++LA Y L +E L F L M++ +
Sbjct: 261 ------SAGIRD------------LVTWNSLLAAYL--LRSQEDLAFKLLIDMQEHGFEP 300
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC--GNLRSARI 432
D + I++ C + G+ +HG + + + ++ +SNAL+ MY K G+++ A
Sbjct: 301 DLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALC 360
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANIS 491
F + + +D+VSWN++LTG ++ G SE+A+ SF M+ ++F +L +C++++
Sbjct: 361 IFESL-EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLA 419
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ + G+QIH ++ E N +L+ +Y+KC +E A R F+E+S I N+++
Sbjct: 420 TFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMF 479
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G+ + + AL++F LM+++ +K DHITF +L AC H G V+ +F M YG+
Sbjct: 480 GYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVP 539
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P++EHY C + LY R G ++E + + MPF P + + CR G L A
Sbjct: 540 PRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGH 599
Query: 672 LNELNPWAPFQFKITTNRF 690
L E+ P + + +N +
Sbjct: 600 LLEMEPEEHCTYVLLSNMY 618
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 226/505 (44%), Gaps = 43/505 (8%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L VK G +V +++++ Y KC + A +FD++ +++VSWN ++ ++ GN
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGN- 79
Query: 226 KEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA + +R L+ +TF + L +F + G Q+H +IIK+ + + +
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC +LEDA + N +SW ++++GYA +G +R W
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAG-------------DRETAFW 186
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ M + + +D T +L + + ++HG I +
Sbjct: 187 ------------------LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIK 228
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + NAL+ Y KCG+L A+ F + RD V+WN++L Y R Q + A
Sbjct: 229 HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFK 288
Query: 465 SFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
+MQ P +++ ++++AC N + G+ +H VI+ +E +V AL+ +Y
Sbjct: 289 LLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYL 348
Query: 524 KC--CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
K ++ A+ +F+ D + NS++ G +A++ F M+ + DH +F
Sbjct: 349 KSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSF 408
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L +C +L Q + KYG+ +I +Y + G +++
Sbjct: 409 SAVLRSCSDLATFQLGQQIH-VLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGE 666
N ++ +F GYA G+
Sbjct: 468 KNSSITWNALMF------GYAQHGQ 486
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 173/381 (45%), Gaps = 31/381 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC--GNLDD 95
EP YS Y + C + R L ++ V + N I Y K G++ +
Sbjct: 299 EPDLYS-YTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKE 357
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + +D SWN++L +Q G ++ FL M + + + +++ VLRS ++
Sbjct: 358 ALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSD 417
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ +Q+H L +K G N + SSL+ Y KC ++ DARR F++ ++++WN +
Sbjct: 418 LATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNAL 477
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HG 268
+ Y G A+ +FF M + ++ + TF L ACS + +G + +G
Sbjct: 478 MFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYG 537
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR 327
V +++ V ++Y + GRLE+A+ L+++ P + + W + + G I
Sbjct: 538 VPPRMEHYACAV------DLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIE 591
Query: 328 EARELFN---EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
A ++ EM ++ + Y + W E LM++ + + +V
Sbjct: 592 LACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKE--RGVKKV------- 642
Query: 385 VCAGLSEIKMGKEVHGFIHRN 405
G S I++ VH FI ++
Sbjct: 643 --PGWSWIEVNNNVHAFIAQD 661
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 180/614 (29%), Positives = 312/614 (50%), Gaps = 43/614 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ + + G LD+A+ ++ + ER+ + N ++ + E+F+ S + N
Sbjct: 320 VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSA-AVNV 378
Query: 144 ITYANVLRSSAE----ELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDAR 198
TY +L + AE E L +++H +++ G + + + LV+ Y KC + A
Sbjct: 379 DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F ++ ++ +SWN I+ G + A++ + M + I P NF + L +C+ L
Sbjct: 439 RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 498
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+H +K D V +L +MY +CGR+
Sbjct: 499 LLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMS---------------------- 536
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL-WKEALDFVFLMRKTTKDIDQV 377
E E+FN M +V+SWN+++ S E++ M K+ ++V
Sbjct: 537 ---------ECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKV 587
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T L LS +++GK++H + ++ + + V NAL+ Y K G++ S F +M
Sbjct: 588 TFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRM 647
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQG 496
S RRD +SWN++++GY G +EAM M E TF +L ACA++++LE+G
Sbjct: 648 SGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERG 707
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
++H F +R+ E +VV ALV++Y+KC ++YA +VF S + NSMI G+ +
Sbjct: 708 MEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARH 767
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
GR+ALE+F M++ G PDH+TF +L AC H G V+ L +F+ M YGI+P++EH
Sbjct: 768 GLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEH 826
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT---LGEWAARRLN 673
Y C+I L R G + ++++++ RMP P + R + C+++ + LG A+R L
Sbjct: 827 YSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLL 886
Query: 674 ELNPWAPFQFKITT 687
EL P P + +++
Sbjct: 887 ELEPQNPVNYVLSS 900
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 158/586 (26%), Positives = 279/586 (47%), Gaps = 54/586 (9%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T +FL N + Y K LD AR +FD MP R+ SW ++ + +G P LF
Sbjct: 97 THDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRA 156
Query: 134 M--NHSGVSANQITYANVLRSSAEEL--ELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
M G T+ +VLR+ + LG + Q+HGL+ K F N + ++L+ YG
Sbjct: 157 MLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYG 216
Query: 190 KCMVMTD--ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPL 243
C V A+R+FD ++ ++WN ++ Y G+ +F M +D +RP
Sbjct: 217 SCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPT 276
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
TF +L ++LSS LG L +++V+ +L
Sbjct: 277 EHTFG-SLITATYLSS--------------------CSLGLLDQLFVR---------VLK 306
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
++ +++VS +A G + EA++++ + ERN ++ N ++AG + EA
Sbjct: 307 SGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQ-HGEAAAE 365
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSE----IKMGKEVHGFIHRNDY-SSNIFVSNALL 418
+F+ + + ++ T ++L+ A S ++ G+EVH + R + I VSN L+
Sbjct: 366 IFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLV 425
Query: 419 DMYRKCGNL-RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
+MY KCG + ++ R+ +Q+ + RD++SWN ++T + G E AM ++ M Q PS
Sbjct: 426 NMYAKCGAIDKACRV--FQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPS 483
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
F + L++CA + L G+Q+HC ++ ++ ALV++Y +C + +F
Sbjct: 484 NFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFN 543
Query: 537 ESSSLDVIICNSMILGFCHNERG--REALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
S+ DV+ NS I+G + + E+++VF M K G+ P+ +TF L A +
Sbjct: 544 SMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVL 602
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L Q M K+G+ ++ Y + G + E +RM
Sbjct: 603 ELGKQIHSVM-LKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRM 647
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 210/421 (49%), Gaps = 39/421 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y KCG +D A +F M RD SWN ++ A QNG+ + + M + +
Sbjct: 422 NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 481
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ + L S A L +QLH VK G + + ++LV YG+C M++ +
Sbjct: 482 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEI 541
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNG---KEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
F+ + + VSWN I+ ++A + E+V +F M++ + P TF N L A + L
Sbjct: 542 FNSMSAHDVVSWNSIMG--VMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPL 599
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSI 316
S G QIH V++K D+ V +L Y K G ++ L + R+ ISW S+
Sbjct: 600 SVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSM 659
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGY +G + +EA+D V LM + + +D
Sbjct: 660 ISGYIYNGHL-------------------------------QEAMDCVCLMMHSEQMMDH 688
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T ++LN CA ++ ++ G E+H F R+ S++ V +AL+DMY KCG + A F+
Sbjct: 689 CTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHS 748
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQ 495
MSQ +++ SWN++++GYAR G +A+ F EMQ P TF ++L+AC++ +E+
Sbjct: 749 MSQ-KNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVER 807
Query: 496 G 496
G
Sbjct: 808 G 808
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 228/497 (45%), Gaps = 43/497 (8%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ LH +VKRG ++ L + LV++Y K + ARR+FD + +NAVSW ++ ++++
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 223 GNGKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEG--MQIHGVIIKIDFEGD 278
G ++A +F MLRE RP +FTF + L AC G +Q+HG++ K +F +
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 279 DVVLGSLTEMYVKC--GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L MY C G A+ + D R++I+W +++S YA G LF M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
Y S + + F T + +LGL+
Sbjct: 265 Q-------------YDDSGIELRPTEHTFGSLITATYLSSCSLGLL-------------D 298
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++ + ++ SS+++V +AL+ + + G L A+ + + + R+ V+ N ++ G ++
Sbjct: 299 QLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKE-RNAVTLNGLIAGLVKQ 357
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ----GKQIHCFVIR--NCYEI 510
E A F + + T+ LL+A A S+ EQ G+++H V+R + Y
Sbjct: 358 QHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRK 417
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
V G LV +Y KC ++ A RVF+ + D I N++I N A+ + LM+
Sbjct: 418 IAVSNG-LVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMR 476
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFF-DSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ I P + L +C G + Q D++ K+G+ ++K+Y G
Sbjct: 477 QNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAV--KWGLYLDTSVSNALVKMYGECGR 534
Query: 630 MKELEDFVNRMPFNPTV 646
M E + N M + V
Sbjct: 535 MSECWEIFNSMSAHDVV 551
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 171/322 (53%), Gaps = 6/322 (1%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA + ++L + V + + N ++ YG+CG + + +F+ M D SW
Sbjct: 494 CAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSW 553
Query: 112 NAMLGAYTQNGFP-GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
N+++G + P ++++F +M SG+ N++T+ N L + L + KQ+H +++
Sbjct: 554 NSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVML 613
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAV 229
K G + ++++L+ Y K + R+F + + +A+SWN ++ Y+ G+ +EA+
Sbjct: 614 KHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAM 673
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
M+ + + TF+ L AC+ +++ GM++H ++ E D VV +L +MY
Sbjct: 674 DCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMY 733
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWN 345
KCGR++ A + ++N SW S++SGYA G R+A E+F EM E + +++
Sbjct: 734 SKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFV 793
Query: 346 AMLAGYTRSLLWKEALDFVFLM 367
++L+ + + L + LD+ LM
Sbjct: 794 SVLSACSHAGLVERGLDYFELM 815
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+ S++ + + ++ + CAS A+ ++ + + + V + + ++ Y KCG +
Sbjct: 680 MHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRI 739
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D A +F M +++ SWN+M+ Y ++G + LE+F +M SG S + +T+ +VL +
Sbjct: 740 DYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSAC 799
Query: 154 AEELELGVSKQLHGLIVKRGF 174
+ H +V+RG
Sbjct: 800 S-----------HAGLVERGL 809
>gi|347954532|gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
Length = 464
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 256/439 (58%), Gaps = 4/439 (0%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ I+ N + WN + R + + + A+ ++ M+ + P +++F L +C+
Sbjct: 26 AISVFETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMISLGLLPNSYSFPFLLKSCAK 85
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ ++ D V SL MY + GRLEDA + D+ R+++S+T++
Sbjct: 86 SKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 145
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GYA G + AR+LF+E+ ++++SWNAM++GY + +KEAL+ M KT D+
Sbjct: 146 ITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVKTNVKPDE 205
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA S I++G++VH I + + SN+ V NAL+DMY KCG + +A +Q
Sbjct: 206 STMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEMETA-CRLFQ 264
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+D +SWN ++ G+ +EA+ F EM + P+ T ++L+ACA++ +++
Sbjct: 265 GLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGESPNDVTMLSVLSACAHLGAIDI 324
Query: 496 GKQIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ IH ++ + + + R +L+++Y KC +E A +VF + + N+MI GF
Sbjct: 325 GRWIHVYIDKRLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDSMLARSLSSWNAMIFGF 384
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ + A ++F M+K GI+PD ITF G+L AC H G + L F SM Y I P+
Sbjct: 385 AMHGKANAAFDLFSKMRKSGIEPDDITFVGLLSACSHSGMLDLGRHIFSSMTQDYKITPK 444
Query: 614 LEHYECMIKLYCRYGYMKE 632
LEHY CMI L + KE
Sbjct: 445 LEHYGCMIDLLGQCALFKE 463
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 220/472 (46%), Gaps = 69/472 (14%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + E + WN M + N L+L++ M G+ N ++ +L+S A+
Sbjct: 26 AISVFETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMISLGLLPNSYSFPFLLKSCAK 85
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------------- 196
+Q+HG +VK G+ ++ + +SL+ Y + + D
Sbjct: 86 SKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 145
Query: 197 ------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
AR++FD+I K+ VSWN ++ Y+ N KEA+ ++ +M++ +++P
Sbjct: 146 ITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVKTNVKPDE 205
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T + AC+ S+ G Q+H +I F + V+ +L +MY KCG +E A L
Sbjct: 206 STMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEMETACRLFQG 265
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
++ ISW +++ G+ +EA LF E
Sbjct: 266 LVNKDAISWNTLIGGHTHMNLYKEALFLFQE----------------------------- 296
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYR 422
M ++ + + VT+ +L+ CA L I +G+ +H +I + +++ + +L+DMY
Sbjct: 297 --MLRSGESPNDVTMLSVLSACAHLGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDMYA 354
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KCG++ +A F M R SWNA++ G+A G++ A FS+M+ P TF
Sbjct: 355 KCGDIEAASQVFDSM-LARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGIEPDDITFV 413
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYA 531
LL+AC++ L+ G+ I + ++ Y+I + G ++++ +C + A
Sbjct: 414 GLLSACSHSGMLDLGRHIFSSMTQD-YKITPKLEHYGCMIDLLGQCALFKEA 464
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 164/337 (48%), Gaps = 36/337 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA-- 96
P SYS + L + CA SKA E +++ ++V +++ I Y + G L+DA
Sbjct: 71 PNSYS-FPFLLKSCAKSKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHK 129
Query: 97 -----------------------------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
R LFDE+ +D SWNAM+ Y +
Sbjct: 130 VFDRSSHRHVVSYTALITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEA 189
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LEL+ +M + V ++ T V+ + A+ + + +Q+H LI GF N+ + ++L+D
Sbjct: 190 LELYKEMVKTNVKPDESTMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDM 249
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC M A R+F + NK+A+SWN ++ + KEA+ +F +MLR P + T
Sbjct: 250 YSKCGEMETACRLFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGESPNDVTM 309
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G + SL +MY KCG +E A + D
Sbjct: 310 LSVLSACAHLGAIDIGRWIH-VYIDKRLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDS 368
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
R++ SW +++ G+A+ G+ A +LF++M + +
Sbjct: 369 MLARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGI 405
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA S I R++ S + + ++N ++ Y KCG ++ A LF + +D SW
Sbjct: 215 CAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEMETACRLFQGLVNKDAISW 274
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ++G +T L LF +M SG S N +T +VL + A + + + +H I K
Sbjct: 275 NTLIGGHTHMNLYKEALFLFQEMLRSGESPNDVTMLSVLSACAHLGAIDIGRWIHVYIDK 334
Query: 172 R--GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
R G + L +SL+D Y KC + A ++FD + ++ SWN ++ + + G A
Sbjct: 335 RLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDSMLARSLSSWNAMIFGFAMHGKANAAF 394
Query: 230 VMFFKMLREDIRPLNFTFANALFACS 255
+F KM + I P + TF L ACS
Sbjct: 395 DLFSKMRKSGIEPDDITFVGLLSACS 420
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y KCG+++ A +FD M R SWNAM+ + +G +LF M SG+ +
Sbjct: 350 IDMYAKCGDIEAASQVFDSMLARSLSSWNAMIFGFAMHGKANAAFDLFSKMRKSGIEPDD 409
Query: 144 ITYANVLRSSAEE--LELG 160
IT+ +L + + L+LG
Sbjct: 410 ITFVGLLSACSHSGMLDLG 428
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/648 (28%), Positives = 322/648 (49%), Gaps = 37/648 (5%)
Query: 33 HLKSDEPVSYSL----YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
HL S + + S+ Y L +LC +A E ++ S + V L N + +
Sbjct: 81 HLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFV 140
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+ G+L +A +F +M ERD SWN ++G Y + G+ L L+ M G+ + T+
Sbjct: 141 RFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPC 200
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
VLR+ +L +++H +++ GF +V + ++L+ Y KC + AR +FD + ++
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
+SWN ++ Y E + +FF M + P T + + AC L G ++HG
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHG 320
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+IK F + V SL +M+ G W E
Sbjct: 321 YVIKTGFVAEVSVNNSLIQMHSSVG------------------CWD-------------E 349
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +F++M ++++SW AM++GY ++ L ++A++ +M D++T+ +L+ CAG
Sbjct: 350 AEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAG 409
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L + G +H F R +S + V+N+L+DMY KC + A F+++ + + +SW +
Sbjct: 410 LGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK-NVISWTS 468
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++ G +S EA+ F +M +P+ T ++L+ACA I +L GK+IH +R
Sbjct: 469 IILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL 528
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ AL+++Y +C +E A F S DV N ++ G+ +G A+E+F
Sbjct: 529 GFDGFLPNALLDMYVRCGRMEPAWNQFN-SCEKDVASWNILLTGYAQQGKGGLAVELFHK 587
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M + + PD ITF +L AC G V L++F+SM K+ I P L+HY ++ L R G
Sbjct: 588 MIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAG 647
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+++ +F+ +MP +P + + + CR LGE AA+ + E++
Sbjct: 648 RLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMD 695
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 185/377 (49%), Gaps = 33/377 (8%)
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ + G+ ++A++ M + T+ L C + + EG ++H + K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
++T + V+ G +++S + G + EA +
Sbjct: 123 -----------TVTRLGVRLG--------------------NALLSMFVRFGDLVEAWYV 151
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F +M ER++ SWN ++ GY ++ + EAL+ M D T +L C GL ++
Sbjct: 152 FGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDL 211
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G+EVH + R + S++ V NAL+ MY KCG++ SAR+ F +M RRD++SWNA+++G
Sbjct: 212 ARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y E + F M ++ P T ++++AC + G+++H +VI+ +
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V +L+++++ C + A VF + D++ +MI G+ N +A+E + +M+
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 572 EGIKPDHITFHGILLAC 588
EG+ PD IT +L AC
Sbjct: 391 EGVVPDEITIASVLSAC 407
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 201/469 (42%), Gaps = 69/469 (14%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ + G D+A +F +M +D SW AM+ Y +NG P + +E + M H GV
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++IT A+VL + A L LH + G VI+ +SL+D Y KC + A +
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEV 454
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F I NKN +SW I+ + EA + FF+ + ++P + T + L AC+ + +
Sbjct: 455 FHRIPNKNVISWTSIILGLRLNYRSFEA-LFFFQQMILSLKPNSVTLVSVLSACARIGAL 513
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +IH ++ D + +L +MYV+CGR+E A + E+++ SW +++GY
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGY 572
Query: 321 AISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A G+ A ELF++M E +V I++ ++L +RS + + L++ M
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME-------- 624
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
H+ + N+ +++D+ + G L A + +
Sbjct: 625 --------------------------HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658
Query: 437 MSQRRDKVSWNAVLTG---YARRGQSEEAMTSFSEM-------------------QWE-- 472
M D W A+L Y E A EM +W+
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY-----EINVVCRG 516
R K E L S +E Q+H F+ + + EIN V G
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEG 767
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 144/290 (49%), Gaps = 3/290 (1%)
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
++AL + M++ +++ T +L +C G VH ++ + + + NAL
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNAL 135
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPS 476
L M+ + G+L A F +M++R D SWN ++ GYA+ G +EA+ + M W RP
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAER-DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+TF +L C + L +G+++H VIR +E +V AL+ +Y KC + A VF
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
D I N+MI G+ N+ E L +F +M++ + PD +T ++ AC G+ +L
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ + K G + ++ +I+++ G E E ++M F V
Sbjct: 315 GREVHGYV-IKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLV 363
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 179/616 (29%), Positives = 312/616 (50%), Gaps = 44/616 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ NR ++ Y K G L A LFDEMP+RD SWN M+ YT G LF M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG + +++ +L+ A + +Q+HGL++K G+ NV + SSLVD Y KC + D
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACS 255
A F +I N+VSWN ++ ++ + K A + M ++ + TFA L +
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL---T 211
Query: 256 FLSSPYEG---MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
L P Q+H ++K+ GL + I
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKL--------------------------GL-----QHEITI 240
Query: 313 WTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+++S YA G + +A+ +F+ + +++ISWN+M+AG+++ L + A + M++
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK--CGNLRS 429
+ D T +L+ C+G GK +HG + + +NAL+ MY + G +
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACA 488
A F + + +D +SWN+++TG+A++G SE+A+ FS ++ E + + F LL +C+
Sbjct: 361 ALSLFESL-KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICN 547
++++L+ G+QIH ++ + N +L+ +Y+KC +E A + F++ SS + N
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MILG+ + G+ +L++F M + +K DH+TF IL AC H G ++ L+ + M
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
Y I P++EHY + L R G + + ++ + MP NP +L+ CR G +
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599
Query: 668 AARRLNELNPWAPFQF 683
A L E+ P F +
Sbjct: 600 VANHLLEIEPEDHFTY 615
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 211/470 (44%), Gaps = 36/470 (7%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +K G ++ + + ++D+Y K + A +FD++ +++VSWN ++ Y G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A +F M R ++F+ L + + G Q+HG++IK +E + V SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KC R+EDA + E N +SW ++++G+ I+ A L M + ++
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT-- 200
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+D T +L + + K+VH + +
Sbjct: 201 ----------------------------MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
I + NA++ Y CG++ A+ F + +D +SWN+++ G+++ E A
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 466 FSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +MQ W +T+ LL+AC+ GK +H VI+ E AL+ +Y
Sbjct: 293 FIQMQRHW-VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYI 351
Query: 524 K--CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
+ +E A+ +F+ S D+I NS+I GF +A++ F ++ IK D F
Sbjct: 352 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
+L +C ++L Q ++ K G + +I +Y + G ++
Sbjct: 412 SALLRSCSDLATLQLGQQIH-ALATKSGFVSNEFVISSLIVMYSKCGIIE 460
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 166/348 (47%), Gaps = 18/348 (5%)
Query: 284 SLTEMY-VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SLT Y +KCG + D I I+ Y G + A LF+EMP+R+ +
Sbjct: 20 SLTHCYAIKCGSISD------------IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSV 67
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWN M++GYT ++A M+++ D+D + +L A + +G++VHG +
Sbjct: 68 SWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLV 127
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ Y N++V ++L+DMY KC + A F ++S+ + VSWNA++ G+ + + A
Sbjct: 128 IKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE-PNSVSWNALIAGFVQVRDIKTA 186
Query: 463 --MTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ EM+ TF LL + KQ+H V++ + + A++
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246
Query: 521 VYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
Y C + A RVF S D+I NSMI GF +E A E+F M++ ++ D
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
T+ G+L AC E + ++ + M K G+ +I +Y ++
Sbjct: 307 TYTGLLSACSGEEH-QIFGKSLHGMVIKKGLEQVTSATNALISMYIQF 353
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/648 (28%), Positives = 322/648 (49%), Gaps = 37/648 (5%)
Query: 33 HLKSDEPVSYSL----YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
HL S + + S+ Y L +LC +A E ++ S + V L N + +
Sbjct: 81 HLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFV 140
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+ G+L +A +F +M ERD SWN ++G Y + G+ L L+ M G+ + T+
Sbjct: 141 RFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPC 200
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
VLR+ +L +++H +++ GF +V + ++L+ Y KC + AR +FD + ++
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
+SWN ++ Y E + +FF M + P T + + AC L G ++HG
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHG 320
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+IK F + V SL +M+ G W E
Sbjct: 321 YVIKTGFVAEVSVNNSLIQMHSSVG------------------CWD-------------E 349
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +F++M ++++SW AM++GY ++ L ++A++ +M D++T+ +L+ CAG
Sbjct: 350 AEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAG 409
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L + G +H F R +S + V+N+L+DMY KC + A F+++ + + +SW +
Sbjct: 410 LGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK-NVISWTS 468
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++ G +S EA+ F +M +P+ T ++L+ACA I +L GK+IH +R
Sbjct: 469 IILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL 528
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ AL+++Y +C +E A F S DV N ++ G+ +G A+E+F
Sbjct: 529 GFDGFLPNALLDMYVRCGRMEPAWNQFN-SCEKDVASWNILLTGYAQQGKGGLAVELFHK 587
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M + + PD ITF +L AC G V L++F+SM K+ I P L+HY ++ L R G
Sbjct: 588 MIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAG 647
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+++ +F+ +MP +P + + + CR LGE AA+ + E++
Sbjct: 648 RLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMD 695
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 185/377 (49%), Gaps = 33/377 (8%)
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N ++ + G+ ++A++ M + T+ L C + + EG ++H + K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
++T + V+ G +++S + G + EA +
Sbjct: 123 -----------TVTRLGVRLG--------------------NALLSMFVRFGDLVEAWYV 151
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F +M ER++ SWN ++ GY ++ + EAL+ M D T +L C GL ++
Sbjct: 152 FGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDL 211
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G+EVH + R + S++ V NAL+ MY KCG++ SAR+ F +M RRD++SWNA+++G
Sbjct: 212 ARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270
Query: 453 YARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y E + F M ++ P T ++++AC + G+++H +VI+ +
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V +L+++++ C + A VF + D++ +MI G+ N +A+E + +M+
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 572 EGIKPDHITFHGILLAC 588
EG+ PD IT +L AC
Sbjct: 391 EGVVPDEITIASVLSAC 407
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 201/469 (42%), Gaps = 69/469 (14%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ + G D+A +F +M +D SW AM+ Y +NG P + +E + M H GV
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++IT A+VL + A L LH + G VI+ +SL+D Y KC + A +
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEV 454
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F I NKN +SW I+ + EA + FF+ + ++P + T + L AC+ + +
Sbjct: 455 FHRIPNKNVISWTSIILGLRLNYRSFEA-LFFFQQMILSLKPNSVTLVSVLSACARIGAL 513
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +IH ++ D + +L +MYV+CGR+E A + E+++ SW +++GY
Sbjct: 514 SCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGY 572
Query: 321 AISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A G+ A ELF++M E +V I++ ++L +RS + + L++ M
Sbjct: 573 AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME-------- 624
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
H+ + N+ +++D+ + G L A + +
Sbjct: 625 --------------------------HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658
Query: 437 MSQRRDKVSWNAVLTG---YARRGQSEEAMTSFSEM-------------------QWE-- 472
M D W A+L Y E A EM +W+
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY-----EINVVCRG 516
R K E L S +E Q+H F+ + + EIN V G
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEG 767
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 144/290 (49%), Gaps = 3/290 (1%)
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
++AL + M++ +++ T +L +C G VH ++ + + + NAL
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNAL 135
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPS 476
L M+ + G+L A F +M++R D SWN ++ GYA+ G +EA+ + M W RP
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAER-DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPD 194
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+TF +L C + L +G+++H VIR +E +V AL+ +Y KC + A VF
Sbjct: 195 VYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFD 254
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
D I N+MI G+ N+ E L +F +M++ + PD +T ++ AC G+ +L
Sbjct: 255 RMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERL 314
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ + K G + ++ +I+++ G E E ++M F V
Sbjct: 315 GREVHGYV-IKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLV 363
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/650 (29%), Positives = 315/650 (48%), Gaps = 37/650 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S+++ + ++ A+ + R+L + F V + ++ Y K N D R +FDE
Sbjct: 98 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDE 157
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M ER+ +W ++ Y +N L LF+ M G N T+A L AEE G
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q+H ++VK G + + +SL++ Y KC + AR +FD + K+ V+WN ++ Y
Sbjct: 218 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 277
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G EA+ MF+ M +R +FA+ + C+ L Q+H ++K F D +
Sbjct: 278 GLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L Y KC + DA L + +G+ NV+
Sbjct: 338 TALMVAYSKCMAMLDALRLFKE-------------TGFL-----------------GNVV 367
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SW AM++G+ ++ +EA+ M++ ++ T +IL +S EVH +
Sbjct: 368 SWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQV 423
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ +Y + V ALLD Y K G + A F + + D V+W+A+L GYA+ G++E A
Sbjct: 424 VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNK-DIVAWSAMLAGYAQAGETEAA 482
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACA-NISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ FSE+ + +P++FTF ++L CA +S+ QGKQ H F I++ + ++ AL+
Sbjct: 483 IKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLT 542
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y K +E A VFK D++ NSMI G+ + + +AL+VF MKK +K D +T
Sbjct: 543 MYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVT 602
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F G+ AC H G V+ ++FD M I P EH CM+ LY R G +++ ++ M
Sbjct: 603 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNM 662
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + R I CR + LG AA ++ + P + + +N +
Sbjct: 663 PNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMY 712
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 274/562 (48%), Gaps = 38/562 (6%)
Query: 81 NRAIECYGKCGN--LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
N I C+G + L A LFD+ P+RD S+ ++L ++++G LFL++ H G
Sbjct: 33 NFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLG 92
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + +++VL+ SA + +QLH +K GF +V + +SLVD Y K D R
Sbjct: 93 MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGR 152
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+FD+++ +N V+W ++ Y +E + +F +M E +P +FTFA AL +
Sbjct: 153 NVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEG 212
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G+Q+H V++K + V SL +Y+KCG
Sbjct: 213 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN------------------------ 248
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+R+AR LF++ ++V++WN+M++GY + L EAL + MR + + +
Sbjct: 249 -------VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESS 301
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
I+ +CA L E++ +++H + + + + + AL+ Y KC + A F +
Sbjct: 302 FASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETG 361
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+ VSW A+++G+ + EEA+ FSEM+ + RP++FT+ +L A IS E
Sbjct: 362 FLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE--- 418
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+H V++ YE + AL++ Y K ++ A +VF + D++ ++M+ G+
Sbjct: 419 -VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAG 477
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
A+++F + K G+KP+ TF IL C + F K + L
Sbjct: 478 ETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVS 537
Query: 618 ECMIKLYCRYGYMKELEDFVNR 639
++ +Y + G+++ E+ R
Sbjct: 538 SALLTMYAKKGHIESAEEVFKR 559
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 174/339 (51%), Gaps = 10/339 (2%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
+S S +A + +LCA+ K + +L ++V + + + Y KC + DA L
Sbjct: 297 LSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRL 356
Query: 100 FDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
F E + SW AM+ + QN + LF +M GV N+ TY+ +L + L
Sbjct: 357 FKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA----LP 412
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ ++H +VK + + + ++L+DAY K + +A ++F I NK+ V+W+ ++
Sbjct: 413 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAG 472
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-EGMQIHGVIIKIDFEG 277
Y AG + A+ +F ++ + ++P FTF++ L C+ ++ +G Q HG IK +
Sbjct: 473 YAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDS 532
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
V +L MY K G +E A + + E++++SW S++SGYA G+ +A ++F EM
Sbjct: 533 SLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 592
Query: 338 ERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+R V +++ + A T + L +E + +M + K
Sbjct: 593 KRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 631
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/616 (29%), Positives = 315/616 (51%), Gaps = 45/616 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ + + G D+A+ +F + +++ + N ++ + F +++F+ ++ V N
Sbjct: 317 VSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNA 375
Query: 144 ITYANVLRSSAE----ELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDAR 198
TY +L + AE E L + + +HG +++ G + + + LV+ Y KC + A
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++F ++ + +SWN I+ GN +EAV+ + M + I P NF ++L +C+ L
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLK 495
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+H +K + D V L +MY +CG + D W
Sbjct: 496 LLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDY--------------W----- 536
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF--LMRKTTKDIDQ 376
++FN M E + +SWN M+ S + VF +MR ++
Sbjct: 537 ------------KVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIP-NK 583
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT +L + LS +++GK+VH + ++ + V NAL+ Y K G++ S F
Sbjct: 584 VTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTN 643
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQ 495
MS RRD +SWN++++GY G +EAM M + TF +L ACA++++LE+
Sbjct: 644 MSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALER 703
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G ++H F IR+ E +VV ALV++Y+KC ++YA ++F + + NSMI G+
Sbjct: 704 GMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYAR 763
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ GR+A+E+F M + PDH+TF +L AC H G V+ L++F+ M +GI+PQ+E
Sbjct: 764 HGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMP-DHGILPQIE 822
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT---LGEWAARRL 672
HY C+I L R G + ++++++ RMP P + R + CR++ + LG A+R L
Sbjct: 823 HYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVL 882
Query: 673 NELNPWAPFQFKITTN 688
E+ P P + + +N
Sbjct: 883 LEIEPQNPVNYVLASN 898
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/587 (25%), Positives = 274/587 (46%), Gaps = 61/587 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-- 134
+FL N + Y K L A +FDEMPER+ SW ++ Y +G +F M
Sbjct: 96 LFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLR 155
Query: 135 -NHSGVSANQITYANVLRSSAE--ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+G T+ +LR+ + LG + Q+HGL+ K + N + ++L+ YG C
Sbjct: 156 EVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSC 215
Query: 192 MVMTD--ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNF 245
V A+R+FD ++ ++WN ++ Y G+ +F M R D +RP
Sbjct: 216 TVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEH 275
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL-----GSLTEMYVKCGRLEDARG 300
TF S +++ V+ D V++ G +++YV
Sbjct: 276 TFG------SLITAASLSSGSSAVL-------DQVLVWVLKSGCSSDLYVG--------- 313
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+++VS +A G EA+++F + ++N ++ N ++ G R +EA
Sbjct: 314 -------------SALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEA 360
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCA--GLSE--IKMGKEVHGFIHRNDYSS-NIFVSN 415
+ +F+ + T D++ T ++L+ A +SE +++G+ VHG + R + I VSN
Sbjct: 361 VK-IFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSN 419
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETR 474
L++MY KCG + SA F Q+ + D++SWN +++ + G EEA+ +S M Q
Sbjct: 420 GLVNMYAKCGAIESASKIF-QLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCIS 478
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
PS F + L++CA + L G+Q+HC ++ +++ LV++Y +C + +V
Sbjct: 479 PSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKV 538
Query: 535 FKESSSLDVIICNSMILGFCHNERG-REALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
F + D + N+M+ ++ E ++VF M + G+ P+ +TF +L A
Sbjct: 539 FNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSV 598
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
++L Q ++ K+G++ +I Y + G M E M
Sbjct: 599 LELGKQVHAAVM-KHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNM 644
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 197/416 (47%), Gaps = 34/416 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +++L + L CA K + +++ + V + + N ++ YG+CG + D
Sbjct: 479 PSNFALISSLSS-CAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWK 537
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFP-GRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F+ M E D SWN M+G + P +++F +M G+ N++T+ N+L + +
Sbjct: 538 VFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLS 597
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIV 216
L + KQ+H ++K G + +++++L+ Y K M +F ++ + ++A+SWN ++
Sbjct: 598 VLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMI 657
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y+ GN +EA+ + M+ TF+ L AC+ +++ GM++H I+ E
Sbjct: 658 SGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLE 717
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV +L +MY KCGR++ A L + +RN SW S++SGYA G R+A E+F E
Sbjct: 718 SDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEE- 776
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
M ++ + D VT +L+ C+ ++ G
Sbjct: 777 ------------------------------MLRSRESPDHVTFVSVLSACSHAGLVERGL 806
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
E + + I + ++D+ + G + + + +M + + W VL
Sbjct: 807 EYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVA 862
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 181/416 (43%), Gaps = 47/416 (11%)
Query: 7 TILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCA------SSKAIVE 60
T++ + S +P K + G L ++ +L A L L A+++
Sbjct: 552 TMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK 611
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYT 119
+E N+V N I CY K G++ LF M +R D SWN+M+ Y
Sbjct: 612 HGVMEDNVVD----------NALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYI 661
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
NG ++ M HSG + T++ +L + A L +LH ++ +V+
Sbjct: 662 YNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVV 721
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ES+LVD Y KC + A ++F+ + +N SWN ++ Y G G++A+ +F +MLR
Sbjct: 722 VESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSR 781
Query: 240 IRPLNFTFANALFACSFLS------SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
P + TF + L ACS +E M HG++ +I+ + ++ + G
Sbjct: 782 ESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEH------YSCVIDLLGRAG 835
Query: 294 RLEDARGLLDQ-PDERNIISWTSIVSGYAISGR------IREARELFNEMPERNVISWNA 346
+++ + + + P E N + W +++ S REA + E+ +N +++
Sbjct: 836 KIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVL 895
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ + +W++ MR+ T+ + AG S + + VH FI
Sbjct: 896 ASNFHAATGMWEDTAKARTAMRQATEKKE-----------AGRSWVTLNDGVHTFI 940
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/593 (29%), Positives = 305/593 (51%), Gaps = 37/593 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELG 160
MP+R+ S+ ++ Y Q+ ++LF ++ G N + +L+ S E EL
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
S LH I K G N + ++L+DAY C + AR+ FD I K+ VSW +V Y
Sbjct: 61 YS--LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
++++ +F +M P +FTFA L AC L + G +HG ++K +E D
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V L ++Y K G DA +L +F EMP+ +
Sbjct: 179 VGVGLLDLYTKFG---DANDVL----------------------------RVFEEMPKHD 207
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
VI W+ M++ Y +S +EA++ MR+ +Q T +L CA + +++GK+VH
Sbjct: 208 VIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHC 267
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + N+FVSNAL+D+Y KCG L ++ F ++ R ++V+WN ++ GY + G +
Sbjct: 268 HVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNR-NEVTWNTMIVGYVQSGDGD 326
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A++ + M + + + S+ T+ ++L ACA+++++E G QIH ++ Y+ +VV AL+
Sbjct: 327 KALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALI 386
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC ++ A VF S D I N+MI G+ + EAL+ F +M++ P+ +
Sbjct: 387 DMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKL 446
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF IL AC + G + + +F SM YGI P +EHY CM+ L R G++ + +
Sbjct: 447 TFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEE 506
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
+P P V + R + C + LG +A+++ +++P + +N + R
Sbjct: 507 IPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYAR 559
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 237/459 (51%), Gaps = 53/459 (11%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
++YSL+A +++L S A F+ I+ Y CG+++ AR
Sbjct: 59 LAYSLHACIYKLGHESNA--------------------FVGTALIDAYAVCGSVNSARQA 98
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD + +D SW M+ Y +N +L+LF +M G + N T+A VL++
Sbjct: 99 FDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAF 158
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
V K +HG ++K + ++ + L+D Y K D R+F+++ + + W+ ++ RY
Sbjct: 159 SVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRY 218
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ +EAV +F +M R + P FTFA+ L +C+ + + G Q+H ++K+ +G+
Sbjct: 219 AQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNV 278
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V +L ++Y KCGRL+++ L + RN ++W +++ GY SG +A L+ M E
Sbjct: 279 FVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLEC 338
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
V +VT +L CA L+ +++G ++H
Sbjct: 339 QV-------------------------------QASEVTYSSVLRACASLAAMELGTQIH 367
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ Y ++ V NAL+DMY KCG++++AR+ F +S+ RD++SWNA+++GY+ G
Sbjct: 368 SLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSE-RDEISWNAMISGYSMHGLV 426
Query: 460 EEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGK 497
EA+ +F MQ E P+K TF ++L+AC+N L+ G+
Sbjct: 427 GEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQ 465
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 183/619 (29%), Positives = 307/619 (49%), Gaps = 38/619 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V+ N + Y KC L A LFDEMP RD SWN M+ + G + ++ M
Sbjct: 33 VYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRS 92
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G ++ T+ ++L+ A + +Q+H +I+K G+ NV S+L+D Y KC + D
Sbjct: 93 CGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLED 152
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A F I N VSWN ++ Y AG+ + A + M +E + + T+A L
Sbjct: 153 AYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDD 212
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
Q+HG IIK E + + +L Y KCG L+DA+ + D
Sbjct: 213 ADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS------------ 260
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL--MRKTTKDI 374
S IR+ +++WN++LA Y L +E L F L M++ +
Sbjct: 261 ------SAGIRD------------LVTWNSLLAAYL--LRSQEDLAFKLLIDMQEHGFEP 300
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC--GNLRSARI 432
D + I++ C + G+ +HG + + + ++ +SNAL+ MY K G+++ A
Sbjct: 301 DLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALC 360
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANIS 491
F + + +D+VSWN++LTG ++ G SE+A+ SF M+ ++F +L +C++++
Sbjct: 361 IFESL-EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLA 419
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ + G+QIH ++ E N +L+ +Y+KC +E A R F+E+S I N+++
Sbjct: 420 TFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMF 479
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G+ + + AL++F LM+ + +K DHITF +L AC H G V+ +F M YG+
Sbjct: 480 GYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVP 539
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P++EHY C + LY R G ++E + + MPF P + + CR G L A
Sbjct: 540 PRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGH 599
Query: 672 LNELNPWAPFQFKITTNRF 690
L E+ P + + +N +
Sbjct: 600 LLEMEPEEHCTYVLLSNMY 618
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 226/505 (44%), Gaps = 43/505 (8%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L VK G +V +++++ Y KC + A +FD++ +++VSWN ++ ++ GN
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGN- 79
Query: 226 KEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA + +R L+ +TF + L +F + G Q+H +IIK+ + + +
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC +LEDA + N +SW ++++GYA +G +R W
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAG-------------DRETAFW 186
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ M + + +D T +L + + ++HG I +
Sbjct: 187 ------------------LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIK 228
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + NAL+ Y KCG+L A+ F + RD V+WN++L Y R Q + A
Sbjct: 229 HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFK 288
Query: 465 SFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
+MQ P +++ ++++AC N + G+ +H VI+ +E +V AL+ +Y
Sbjct: 289 LLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYL 348
Query: 524 KC--CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
K ++ A+ +F+ D + NS++ G +A++ F M+ + DH +F
Sbjct: 349 KSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSF 408
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L +C +L Q + KYG+ +I +Y + G +++
Sbjct: 409 SAVLRSCSDLATFQLGQQIH-VLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGE 666
N ++ +F GYA G+
Sbjct: 468 KNSSITWNALMF------GYAQHGQ 486
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 173/381 (45%), Gaps = 31/381 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC--GNLDD 95
EP YS Y + C + R L ++ V + N I Y K G++ +
Sbjct: 299 EPDLYS-YTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKE 357
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F+ + +D SWN++L +Q G ++ FL M + + + +++ VLRS ++
Sbjct: 358 ALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSD 417
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ +Q+H L +K G N + SSL+ Y KC ++ DARR F++ ++++WN +
Sbjct: 418 LATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNAL 477
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HG 268
+ Y G A+ +FF M + ++ + TF L ACS + +G + +G
Sbjct: 478 MFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYG 537
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR 327
V +++ V ++Y + GRLE+A+ L+++ P + + W + + G I
Sbjct: 538 VPPRMEHYACAV------DLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIE 591
Query: 328 EARELFN---EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
A ++ EM ++ + Y + W E LM++ + + +V
Sbjct: 592 LACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKE--RGVKKV------- 642
Query: 385 VCAGLSEIKMGKEVHGFIHRN 405
G S I++ VH FI ++
Sbjct: 643 --PGWSWIEVNNNVHAFIAQD 661
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 281/541 (51%), Gaps = 46/541 (8%)
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRG-----FCGNVILESSLVDAYGKCMVMTDAR 198
+ YA++L++ + +Q H +VK G F GN +L SL G ++T R
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLL--SLYFKLGSDSLLT--R 116
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+FD + K+ VSW ++ Y+ G A+ +F+ ML I P FT + + ACS +
Sbjct: 117 RVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIG 176
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G HGV+++ F+ + V+L SL +MY RN +S
Sbjct: 177 NLVLGKCFHGVVVRRGFDSNPVILSSLIDMY-----------------GRNSVS------ 213
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQV 377
+AR+LF+E+ E + + W +++ +TR+ L++EAL F +L + + D
Sbjct: 214 --------SDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNY 265
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T G +L C L ++ G+E+H + +S N+ ++L+DMY KCG + ++ F +M
Sbjct: 266 TFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRM 325
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGK 497
S R + VSW+A+L Y G E+A+ F EM+ ++F T++ ACA ++++ GK
Sbjct: 326 SNR-NSVSWSALLAVYCHNGDYEKAVNLFREMK---EVDLYSFGTVIRACAGLAAVTPGK 381
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+IHC IR +V+ ALV++Y KC C+ +A RVF + ++I NSMI GF N
Sbjct: 382 EIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNG 441
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
A+++F M KEGIKPD I+F G+L AC H G V A +FD M KYGI P +EHY
Sbjct: 442 SSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHY 501
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN-GYATLGEWAARRLNELN 676
CM+ L R G ++E E+ + + + C + E A++L EL
Sbjct: 502 NCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMELE 561
Query: 677 P 677
P
Sbjct: 562 P 562
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 231/459 (50%), Gaps = 41/459 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD--ARGLFD 101
LYA L Q C + R+ +++V F+ N + Y K G+ D R +FD
Sbjct: 62 LYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGS-DSLLTRRVFD 120
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
+ +D SW +M+ Y + G G +ELF DM SG+ N T + V+++ +E L +
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
K HG++V+RGF N ++ SSL+D YG+ V +DAR++FD++ + V W ++ +
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
Query: 222 AGNGKEAVVMFF-KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+EA+ F+ K + P N+TF + L AC L +G +IH +I F G+ V
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
SL +MY KCG +E ++ L D+ RN +SW+++++ Y +G +A LF EM
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREM---- 356
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
K++D + G ++ CAGL+ + GKE+H
Sbjct: 357 -------------------------------KEVDLYSFGTVIRACAGLAAVTPGKEIHC 385
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
R ++ V +AL+D+Y KCG + A F +M R+ ++WN+++ G+A+ G S
Sbjct: 386 QYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPT-RNLITWNSMIHGFAQNGSSG 444
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
A+ F M E +P +F LL AC++ ++Q +
Sbjct: 445 IAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARH 483
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + CA A+ +++ + V + + ++ Y KCG ++ A +FD MP
Sbjct: 364 FGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMP 423
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ +WN+M+ + QNG G +++F M G+ + I++ +L + + + ++
Sbjct: 424 TRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARH 483
Query: 165 LHGLIV-KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNVIV 216
L+ K G V + +VD G+ ++ +A + ++ + +N S W V++
Sbjct: 484 YFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLL 537
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 307/642 (47%), Gaps = 32/642 (4%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S EP Y LF+LC +A+ + ++ + + L N + + G
Sbjct: 82 SAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWH 141
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F +MPERD SWN M+G Y ++G L+L+ M +GV + T+ VLRS
Sbjct: 142 AWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGG 201
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ + +++H +++ GF V + ++L+ Y KC + AR++FD + + +SWN +
Sbjct: 202 VPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAM 261
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + G + +F ML ++++P T + A LS ++HG+ +K F
Sbjct: 262 IAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGF 321
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
GD SL +MY G + AR + + D R+ ++WT+++SGY +G +A E++
Sbjct: 322 AGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYAL 381
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M NV D +T+ L CA L + +G
Sbjct: 382 MEVNNV-------------------------------SPDDITIASALAACACLGSLDVG 410
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H + S I V+NA+L+MY K + A I ++ +D VSW++++ G+
Sbjct: 411 VKLHELAESKGFISYIVVTNAILEMYAKSKRIDKA-IEVFKCMHEKDVVSWSSMIAGFCF 469
Query: 456 RGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
++ EA+ F M + +P+ TF LAACA +L GK+IH V+R E
Sbjct: 470 NHRNFEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLP 529
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC YA F + DV+ N MI GF + G AL F M K G
Sbjct: 530 NALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGEC 589
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF +L AC G V + F SM KY I+P L+HY CM+ L R G + E +
Sbjct: 590 PDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYN 649
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F+N MP P + + + CR + + LGE AA+ + L P
Sbjct: 650 FINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEP 691
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 273/495 (55%), Gaps = 40/495 (8%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A L C S++ R + + ++ + +F+ NR I+ YGKC LDDAR LFD
Sbjct: 16 SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDR 75
Query: 103 MPER-------------------------------DGGSWNAMLGAYTQNGFPGRTLELF 131
MP+R D SWN+M+ + Q+ +LE F
Sbjct: 76 MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ M+ N+ ++ + L + A ++L + Q+H L+ K + +V + S+L+D Y KC
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ A +F + +N V+WN ++ Y G EA+ +F +M+ + P T A+ +
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNI 310
AC+ L + EG+QIH ++K + DD+VLG +L +MY KC ++ +AR + D+ RN+
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S TS+VSGYA + ++ AR +F++M +RNV+SWNA++AGYT++ +EAL L+++
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE 375
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVH------GFIHRNDYSSNIFVSNALLDMYRKC 424
+ T G +L+ CA L+++ +G++ H GF ++ S+IFV N+L+DMY KC
Sbjct: 376 SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKC 435
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
G++ F +M + RD VSWNA++ GYA+ G EA+ F +M +P T +
Sbjct: 436 GSIEDGSRVFEKMKE-RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGV 494
Query: 484 LAACANISSLEQGKQ 498
L AC++ +E+G+
Sbjct: 495 LCACSHAGLVEEGRH 509
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 175/618 (28%), Positives = 300/618 (48%), Gaps = 101/618 (16%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +A +L S ++ +H I+ F + +++ L+D YGKC + DAR++F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 202 DDIQNKNAVSWNVIVR--------------------------RYLVAGNGK-----EAVV 230
D + +N +WN ++ +V+G + E++
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
F KM RED ++F +AL AC+ L G Q+H ++ K + D + +L +MY
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYS 193
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG + A E+F+ M ERN+++WN+++
Sbjct: 194 KCGS-------------------------------VACAEEVFSGMIERNLVTWNSLITC 222
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSS 409
Y ++ EAL+ M + + D+VTL +++ CA L +K G ++H + N +
Sbjct: 223 YEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRD 282
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------------------- 440
++ + NAL+DMY KC + AR F +MS R
Sbjct: 283 DLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMT 342
Query: 441 -RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R+ VSWNA++ GY + G++EEA+ F ++ E+ P+ +TF LL+ACAN++ L G+Q
Sbjct: 343 QRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQ 402
Query: 499 IHCFVIRNCYEI------NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
H V++ +E ++ +L+++Y KC +E RVF++ D + N++I+G
Sbjct: 403 AHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG 462
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ N G EAL++F M G KPDH+T G+L AC H G V+ +F SM ++G+IP
Sbjct: 463 YAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIP 521
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+HY CM+ L R G + E ++ + MP NP + + C+ +G +G+ AA +L
Sbjct: 522 LKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKL 581
Query: 673 NELNPWAPFQFKITTNRF 690
E++PW + + +N +
Sbjct: 582 LEIDPWNSGPYVLLSNMY 599
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 211/398 (53%), Gaps = 34/398 (8%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
++R+ P + FA L +C S +H I+ F + + L ++Y KC
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L+DAR L D+ +RN +W S++S SG + EA LF MPE + SWN+M++G+ +
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
++E+L++ M + +++ + G L+ CAGL ++ MG +VH + ++ YS+++++
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-T 473
+AL+DMY KCG++ A F M + R+ V+WN+++T Y + G + EA+ F M
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIE-RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAI 532
P + T ++++ACA++ +L++G QIH V++ N + ++V ALV++Y KC + A
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 533 RVFKESS-------------------------------SLDVIICNSMILGFCHNERGRE 561
RVF S +V+ N++I G+ N E
Sbjct: 305 RVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEE 364
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
AL +F L+K+E I P H TF +L AC + ++ L Q
Sbjct: 365 ALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQ 402
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/701 (26%), Positives = 325/701 (46%), Gaps = 101/701 (14%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF-DEMP 104
A + C S A+ AR L LVT VFL N + Y CG L DAR L ++
Sbjct: 24 ADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIK 83
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG---- 160
E + + N M+ Y + G ELF M V++ ++ R + + G
Sbjct: 84 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGC 143
Query: 161 --VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF----------------- 201
++ QL GL K F G+ +E++LVD + +C + A R+F
Sbjct: 144 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAG 203
Query: 202 --------------DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
+D+ ++ VSWN+++ +G +EA+ + +M R+ +R + T+
Sbjct: 204 YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY 263
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
++L AC+ L S G Q+H +I+ + D V +L E+Y KCG
Sbjct: 264 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF------------ 311
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+EA+ +FN + +RN +SW ++ G + + ++++ M
Sbjct: 312 -------------------KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 352
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
R IDQ L +++ C ++ +G+++H ++ ++ I VSN+L+ +Y KCG+L
Sbjct: 353 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 412
Query: 428 RSARIWFYQMSQR------------------------------RDKVSWNAVLTGYARRG 457
++A F MS+R R+ ++WNA+L Y + G
Sbjct: 413 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHG 472
Query: 458 QSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
E+ + +S M Q + P T+ TL CA+I + + G QI ++ +NV
Sbjct: 473 AEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVA 532
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
A + +Y+KC + A ++F + DV+ N+MI G+ + G++A + F M +G K
Sbjct: 533 NAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAK 592
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD+I++ +L C H G V+ +FD M +GI P LEH+ CM+ L R G++ E +D
Sbjct: 593 PDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 652
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+++MP PT + + C+ +G L E AA+ + EL+
Sbjct: 653 LIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELD 693
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 203/456 (44%), Gaps = 70/456 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + IE Y KCG+ +A+ +F+
Sbjct: 261 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 320
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ SW ++G Q +++ELF M ++ +Q A ++ ++L +
Sbjct: 321 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 380
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKC-----------------------MV------ 193
+QLH L +K G +++ +SL+ Y KC M+
Sbjct: 381 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 440
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANA 250
+ AR FD + +NA++WN ++ Y+ G ++ + M+ ML ++D+ P T+
Sbjct: 441 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ + + G QI G +K + V + MY KCGR+ +A+ L D + +++
Sbjct: 501 FRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 560
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A + F++M + + IS+ A+L+G + S L +E + +
Sbjct: 561 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDM 620
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + VHG S + + ++D+ + G+
Sbjct: 621 MTR----------------------------VHGI------SPGLEHFSCMVDLLGRAGH 646
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
L A+ +M + W A+L+ G E A
Sbjct: 647 LTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELA 682
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 184/687 (26%), Positives = 321/687 (46%), Gaps = 98/687 (14%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S A+ +AR L +T P V N + Y K G+L DA LF MP RD SWN
Sbjct: 75 SCGALPDARGLLRGDIT---EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNT 131
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
++ Y Q+G +E F+ M SG S N T+ ++S V+ QL GL+ K
Sbjct: 132 LMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKF 191
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ--------------------------- 205
GF G+ + + +VD + +C + A + F I+
Sbjct: 192 GFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELF 251
Query: 206 ----NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
++ VSWN++V +G +EA+ + M +R + T+ ++L AC+ LSS
Sbjct: 252 ESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLG 311
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H +I+ D V ++ E+Y KCG
Sbjct: 312 WGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCF-------------------------- 345
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+EAR +F+ + +RN +SW ++ G+ + + E+L+ MR +DQ L
Sbjct: 346 -----KEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALAT 400
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
I++ C+ ++ + +++H ++ ++ + +SN+L+ MY KCGNL++A F M +R
Sbjct: 401 IISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERD 460
Query: 441 -----------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
R+ ++WNA+L Y + G E+ + +S M
Sbjct: 461 IVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLT 520
Query: 472 ETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
E P T+ TL CA++ + + G QI ++ ++ A++ +Y+KC +
Sbjct: 521 EKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRIS 580
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A ++F S D++ N+MI G+ + G++A+E+F M K+G KPD+I++ +L +C
Sbjct: 581 EARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS 640
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V+ +FD ++ + + P LEH+ CM+ L R G + E ++ ++ MP PT +
Sbjct: 641 HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVW 700
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELN 676
+ C+ +G L E AA+ L +L+
Sbjct: 701 GALLSACKTHGNNELAELAAKHLFDLD 727
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 242/510 (47%), Gaps = 39/510 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF-DDIQ 205
A+ LRS L ++ LHG +V G V L+++L+ AY C + DAR + DI
Sbjct: 32 ADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDIT 91
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN--------------------- 244
N ++ N+++ Y G+ +A +F +M R D+ N
Sbjct: 92 EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151
Query: 245 -----------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
FTF A+ +C L +Q+ G++ K F+GD V + +M+V+CG
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
++ A Q + + S+++GYA S + A ELF MPER+V+SWN M++ ++
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
S +EAL M +D T L CA LS + GK++H + R+ + +V
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
++A++++Y KCG + AR F + + R+ VSW ++ G+ + G E++ F++M+ E
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSL-RDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAEL 390
Query: 474 RP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+F T+++ C+N + +Q+H +++ + VV +L+ +Y KC L+ A
Sbjct: 391 MTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAE 450
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+F D++ M+ + +A E F M + IT++ +L A I G
Sbjct: 451 SIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV----ITWNAMLGAYIQHG 506
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ L+ + +M + +IP Y + +
Sbjct: 507 AEEDGLKMYSAMLTEKDVIPDWVTYVTLFR 536
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 200/428 (46%), Gaps = 34/428 (7%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQ 304
A+AL +C + +HG ++ + + +L Y+ CG L DARGLL
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
E N+I+ +++GYA G + +A ELF MP R+V SWN +++GY +S + +A++
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 365 FLMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
MR++ + + T G + C L ++ ++ G + + + + V+ ++DM+ +
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209
Query: 424 CGNLRSARIWFYQMSQ------------------------------RRDKVSWNAVLTGY 453
CG + A F Q+ + RD VSWN +++
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
++ G++ EA++ +M R T+ + L ACA +SSL GKQ+H VIR+ I+
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
A+VE+Y KC C + A RVF + + +I GF E+LE+F M+ E
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAE 389
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ D I+ C + ++ LA Q S+ K G + +I +Y + G ++
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLH-SLSLKSGHTRAVVISNSLISMYAKCGNLQN 448
Query: 633 LEDFVNRM 640
E + M
Sbjct: 449 AESIFSSM 456
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 204/456 (44%), Gaps = 70/456 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + +E Y KCG +AR +F
Sbjct: 295 TTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSS 354
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ SW ++G + Q G +LELF M ++ +Q A ++ + +++ ++
Sbjct: 355 LRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLA 414
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-------------------------- 196
+QLH L +K G V++ +SL+ Y KC + +
Sbjct: 415 RQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQV 474
Query: 197 -----ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANA 250
AR FD + +N ++WN ++ Y+ G ++ + M+ ML E D+ P T+
Sbjct: 475 GNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTL 534
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ + + G QI G +K+ D V+ ++ MY KCGR+ +AR + D +++
Sbjct: 535 FRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDL 594
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A E+F++M ++ + IS+ A+L+ + S L +E F F
Sbjct: 595 VSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEG-KFYFD 653
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M K NV GL + ++D+ + GN
Sbjct: 654 MLKRDH-----------NVSPGLEHF----------------------SCMVDLLARAGN 680
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
L A+ +M + W A+L+ G +E A
Sbjct: 681 LIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 200/669 (29%), Positives = 325/669 (48%), Gaps = 22/669 (3%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S+SL H + + S A+ + + L+ L N I Y K A
Sbjct: 62 PESHSLL-HALHVSSRSGDTHLAKTVHATLLK-RDEEDTHLSNALISTYLKLNLFPHALR 119
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEEL 157
LF +P + S+ ++ ++ L LFL M S + N+ TY VL + + L
Sbjct: 120 LFLSLPSPNVVSYTTLI-SFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLL 178
Query: 158 E-LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
QLH +K + + ++LV Y K A ++F+ I ++ SWN I+
Sbjct: 179 HHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTII 238
Query: 217 RRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
L A +F M D R +FT + L A + S EG Q+H +K+
Sbjct: 239 SAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASA---SLMEGQQVHAHAVKLGL 295
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D V L Y K G ++D L + R++I+WT +V+ Y G + A ++F+E
Sbjct: 296 ETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDE 355
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
MPE+N +S+N +LAG+ R+ EA+ M + ++ +L +++ C L + K+
Sbjct: 356 MPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVS 415
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYA 454
K+VHGF + + SN +V ALLDMY +CG + A F + + V W A++ GYA
Sbjct: 416 KQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYA 475
Query: 455 RRGQSEEAMTSFSEMQWETRP--SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
R GQ EEA+ F + + + + ++L C I L+ GKQIHC VI+ N+
Sbjct: 476 RNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNL 535
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
A+V +Y KC ++ A++VF + D++ N++I G + +G ALE++ M E
Sbjct: 536 EVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGE 595
Query: 573 GIKPDHITFHGILLACIHEGNVKLA---LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
GIKP+ +TF ++++ + N+ L F+SMR Y I P HY I + +G
Sbjct: 596 GIKPNQVTF-VLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGL 654
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN- 688
++E + +N MPF P+ + R + D CR + +G+WAA+ + L P P F + +N
Sbjct: 655 LQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNL 714
Query: 689 -----RFDR 692
R+DR
Sbjct: 715 YSASGRWDR 723
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 306/600 (51%), Gaps = 41/600 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+ + G+ D AR +F++M R+ S N ++ + +E+F + H V N +Y
Sbjct: 196 FSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETRHL-VDINVDSY 254
Query: 147 ANVLRSSAE--ELELGVSK--QLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMF 201
+L + AE L+ G K ++HG ++ G V + + L++ Y KC + AR +F
Sbjct: 255 VILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVF 314
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ +K++VSWN ++ ++AV + M + + P NFT +AL +C+ L
Sbjct: 315 GLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCIL 374
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q HG IK+ + D V +L +Y + G L
Sbjct: 375 LGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLA------------------------- 409
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLG 380
E +++F+ M ER+ +SWN ++ S EA++ M + ++VT
Sbjct: 410 ------ECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 463
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L + LS K+ ++H I + + + + NALL Y K G + + F +MS+R
Sbjct: 464 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 523
Query: 441 RDKVSWNAVLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISSLEQGKQI 499
RD+VSWN++++GY +AM + MQ R FTF T+L+ACA +++LE+G ++
Sbjct: 524 RDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEV 583
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H IR C E +VV ALV++Y+KC ++YA R F ++ NSMI G+ + G
Sbjct: 584 HACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYG 643
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
AL +F MK G PDHITF G+L AC H G V ++F SM YG++P++EHY C
Sbjct: 644 DNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSC 703
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEWAARRLNELNP 677
M+ L R G + ++++F+N+MP P + + R + CR NG T LG AA L ++P
Sbjct: 704 MVDLLGRAGELDKIDNFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDP 763
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 269/554 (48%), Gaps = 48/554 (8%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG-- 160
MP+R+G +W ++ YTQNG P + +M G N+ + + +R+ E + G
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-ARRMFDDIQNKNAVSWNVIVRRY 219
+ Q+HGLI+K + + L + L+ YGK + D AR +FD+I+ +N++ WN IV Y
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120
Query: 220 LVAGNGKEAVVMFFKMLRED----IRPLNFTFANALF-ACSFLSSPYEGMQIHGVIIKID 274
G+ +F M D ++P +TF + + ACS + S G+ + G I+
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDS---GLSLLGQIL--- 174
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
R++ + GLL N+ +++ G++ G AR++F
Sbjct: 175 ------------------ARIKKS-GLL-----ANLYVGSALAGGFSRLGSFDYARKIFE 210
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI-- 392
+M RN +S N ++ G R +EA++ VF + DI+ + ++L+ CA + +
Sbjct: 211 QMTARNAVSMNGLMVGLVRQKCGEEAVE-VFKETRHLVDINVDSYVILLSACAEFALLDE 269
Query: 393 --KMGKEVHGFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ G+EVHG+ R + + + V N L++MY KCG++ AR F M +D VSWN++
Sbjct: 270 GRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVD-KDSVSWNSM 328
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+TG + E+A+ S++ M + PS FT + L++CA++ + G+Q H I+
Sbjct: 329 ITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGL 388
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG-REALEVFG 567
+++V L+ +Y + L +VF D + N++I + EA+EVF
Sbjct: 389 DMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFL 448
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M + G P+ +TF +L KL+ Q ++ KY + ++ Y +
Sbjct: 449 EMMRAGWSPNRVTFINLLATVSSLSTSKLSHQ-IHALILKYNVKDDNAIENALLACYGKS 507
Query: 628 GYMKELEDFVNRMP 641
G M+ E+ +RM
Sbjct: 508 GEMENCEEIFSRMS 521
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 224/460 (48%), Gaps = 40/460 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESN-----LVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
Y L CA + E R+ + T V + N I Y KCG++D AR +
Sbjct: 254 YVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSV 313
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F M ++D SWN+M+ QN ++ + M +G+ + T + L S A +
Sbjct: 314 FGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFTLISALSSCASLGCI 373
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+ +Q HG +K G +V + ++L+ Y + + + +++F + ++ VSWN ++
Sbjct: 374 LLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGAL 433
Query: 220 LVAGNG-KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+G EA+ +F +M+R P TF N L S LS+ QIH +I+K + + D
Sbjct: 434 ADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDD 493
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNIISWTSIVSGYAISGRIREARELFNEMP 337
+ + +L Y K G +E+ + + E R+ +SW S++SGY + N+
Sbjct: 494 NAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGY-----------IHND-- 540
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
L +A+D V+LM + + +D T +L+ CA ++ ++ G E
Sbjct: 541 ------------------LLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGME 582
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH R S++ + +AL+DMY KCG + A F+ + R+ SWN++++GYAR G
Sbjct: 583 VHACAIRACLESDVVIGSALVDMYSKCGRIDYAS-RFFNLMPMRNLYSWNSMISGYARHG 641
Query: 458 QSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQG 496
+ A+ F+ M+ + P TF +L+AC++I +++G
Sbjct: 642 YGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 681
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 170/621 (27%), Positives = 279/621 (44%), Gaps = 92/621 (14%)
Query: 79 LLNRAIECYGK-CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF--LDMN 135
L N I YGK G +D AR +FDE+ R+ WN+++ Y+Q G ELF + M
Sbjct: 80 LCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMA 139
Query: 136 HSGVS--ANQITYANVLRSSAEELELGVS--KQLHGLIVKRGFCGNVILESSLVDAYGKC 191
SG+S N+ T+ +++ ++ ++ G+S Q+ I K G N+ + S+L + +
Sbjct: 140 DSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKSGLLANLYVGSALAGGFSRL 199
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
AR++F+ + +NAVS N ++ + G+EAV + FK R + ++ L
Sbjct: 200 GSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV-FKETRHLVDINVDSYVILL 258
Query: 252 FACSFLSSPYE----GMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPD 306
AC+ + E G ++HG I+ V +G+ L MY KCG ++ AR +
Sbjct: 259 SACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMV 318
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+++ +SW S+++G N+ E V S+N+
Sbjct: 319 DKDSVSWNSMITGLDQ-----------NKCFEDAVKSYNS-------------------- 347
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MRKT TL L+ CA L I +G++ HG + ++ VSN LL +Y + G+
Sbjct: 348 MRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGH 407
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS-EEAMTSFSEMQ---WETRPSKFTFET 482
L + F M + RD+VSWN V+ A G S EA+ F EM W P++ TF
Sbjct: 408 LAECQKVFSWMLE-RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWS--PNRVTFIN 464
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF-KESSSL 541
LLA +++S+ + QIH +++ + + AL+ Y K +E +F + S
Sbjct: 465 LLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERR 524
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IH 590
D + NSMI G+ HN+ +A+++ LM + G + D TF +L AC +H
Sbjct: 525 DEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVH 584
Query: 591 E------------------------GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
G + A +FF+ M + L + MI Y R
Sbjct: 585 ACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMR-----NLYSWNSMISGYAR 639
Query: 627 YGYMKELEDFVNRMPFNPTVP 647
+GY RM + +P
Sbjct: 640 HGYGDNALRLFTRMKLSGQLP 660
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 176/591 (29%), Positives = 287/591 (48%), Gaps = 36/591 (6%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM--NHSGVSANQITYAN 148
G L AR +FD+MP RD SW A++ Y P L LF M + GVS + +
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
L++ + + + LH K +V + S+L+D Y + + + R+F ++ +N
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+V+W + + AG E + F +M R + + F FA AL AC+ L G +IH
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
+I F V SL MY +CG ++D GL
Sbjct: 222 THVIVKGFAAILWVANSLATMYTECGEMQD--GL-------------------------- 253
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
LF M ER+V+ W +++ Y R ++A++ LMR + ++ T CA
Sbjct: 254 ---RLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACA 310
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
LS + G+++HG + ++ VSN+++ MY C L SA + F M + RD +SW+
Sbjct: 311 SLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGM-RCRDIISWS 369
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++ GY++ EE FS M Q +P+ F +LL+ ++ LEQG+Q+H +
Sbjct: 370 TIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYL 429
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
E N R AL+ +Y+KC + A +VF+E D++ +MI G+ + + EA+++F
Sbjct: 430 GLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLF 489
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
K +PD +TF +L AC H G + L Q+F+ M+ Y + P EHY CM+ L CR
Sbjct: 490 EKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCR 549
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G + + E +N MP+ + + C++ G G AA+R+ EL+P
Sbjct: 550 AGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDP 600
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/585 (24%), Positives = 256/585 (43%), Gaps = 52/585 (8%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ C S I L + + VF+ + ++ Y + G +D + +F EMP R+
Sbjct: 103 LKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNS 162
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W A + G L F M+ +S++ +A L++ A+ ++ +++H
Sbjct: 163 VTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHT 222
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++ +GF + + +SL Y +C M D R+F+ + ++ V W ++ Y+ G ++
Sbjct: 223 HVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEK 282
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
AV F M + P TFA+ AC+ LS G Q+HG + + V S+ +
Sbjct: 283 AVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMK 342
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY C +L+ A L R+IISW++I+ GY+ + E + F SW
Sbjct: 343 MYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYF---------SW--- 390
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
MR+ L +L+V ++ ++ G++VH
Sbjct: 391 -------------------MRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGL 431
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
N + +AL++MY KCG++ A F + R D VS A++ GYA G+ EEA+ F
Sbjct: 432 EQNPTIRSALINMYSKCGSIIEASKVFEE-KDRTDIVSLTAMINGYAEHGKCEEAIDLFE 490
Query: 468 E-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GALVEVYTK 524
+ ++ RP TF ++L AC++ L+ G Q + N Y + G +V++ +
Sbjct: 491 KSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQEN-YNMRPAKEHYGCMVDLLCR 549
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHN----ERGREALEVFGLMKKEGIKPDHIT 580
L A ++ E + + +L C ERGR A + ++ D +
Sbjct: 550 AGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRI-------LELDPTS 602
Query: 581 FHGIL-LACIHE--GNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
F ++ LA IH GN K A M+ K G+I + +IK
Sbjct: 603 FTTLVTLANIHSSTGNWKEAANVRKDMKSK-GVIKEPGWSSILIK 646
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 200/449 (44%), Gaps = 36/449 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA + + R++ ++++ +++ N Y +CG + D LF+ M
Sbjct: 201 FAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMS 260
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD W +++ AY + G + + FL M +S VS N+ T+A+ + A L +Q
Sbjct: 261 ERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQ 320
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LHG + G ++ + +S++ Y C + A +F ++ ++ +SW+ I+ Y A
Sbjct: 321 LHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAF 380
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G+E F M + +P +F A+ L ++ +G Q+H + + + E + + +
Sbjct: 381 GEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSA 440
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KCG + +A + ++ D +I+S T++++GYA G+ EA +LF
Sbjct: 441 LINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFE---------- 490
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+SL K + D VT +L C+ ++ +G + +
Sbjct: 491 --------KSL-------------KLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQE 529
Query: 405 N-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
N + ++D+ + G L A +M ++D V W +L +G E
Sbjct: 530 NYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGR 589
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISS 492
+ + E P+ F T L ANI S
Sbjct: 590 RAAQRI-LELDPTSF---TTLVTLANIHS 614
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 141/271 (52%), Gaps = 7/271 (2%)
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLG 380
SG++R AR++F++MP R++ SW A++ GY + +EAL MR + D L
Sbjct: 41 SGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLS 100
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL-RSARIWFYQMSQ 439
+ L C S I G+ +H + + S++FV +ALLDMY + G + +S R+ F +M
Sbjct: 101 VALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRV-FAEMP- 158
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSLEQGK 497
R+ V+W A +TG G E + FS+M + F F L ACA++ ++ G+
Sbjct: 159 FRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGR 218
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+IH VI + + +L +YT+C ++ +R+F+ S DV++ S+I +
Sbjct: 219 EIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIG 278
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ +A+ F LM+ + P+ TF AC
Sbjct: 279 QEEKAVNTFLLMRNSQVSPNEQTFASTFAAC 309
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 5/321 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A F CAS +V +L N+ + + + N ++ Y C LD A LF M
Sbjct: 302 FASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMR 361
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SW+ ++G Y+Q F + F M +G A++L S L +Q
Sbjct: 362 CRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQ 421
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L + G N + S+L++ Y KC + +A ++F++ + VS ++ Y G
Sbjct: 422 VHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGK 481
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLG 283
+EA+ +F K L+ RP + TF + L ACS G Q ++ + + G
Sbjct: 482 CEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYG 541
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+ ++ + GRL DA ++++ P +++ + WT+++ G + R + E +
Sbjct: 542 CMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPT 601
Query: 343 SWNAMLA---GYTRSLLWKEA 360
S+ ++ ++ + WKEA
Sbjct: 602 SFTTLVTLANIHSSTGNWKEA 622
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 191/620 (30%), Positives = 319/620 (51%), Gaps = 49/620 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ + + G LD+A+ +F + ER+ + N ++ + + +F+ S V N
Sbjct: 312 VSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFV-VNT 370
Query: 144 ITYANVLRSSAE----ELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDAR 198
T+ +L + AE E L +++HG I++ G + L + LV+ Y KC + A
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKAS 430
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNG-KEAVVMFFKMLRED-IRPLNFTFANALFACSF 256
R+F + ++ VSWN I+ ++ NG E +M + M+R+ I P NF + L +C+
Sbjct: 431 RVFRLLCARDRVSWNTIIS--VLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCAS 488
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G Q+H +K + D V +L +MY CG ++ + + E +I+SW SI
Sbjct: 489 LRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSI 548
Query: 317 VSGYAISGR--IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ G +S E+ E+F+ M M +G T
Sbjct: 549 M-GVMVSSHAPTAESVEVFSNM----------MRSGLTP--------------------- 576
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
++VT +L+ + LS +++GK+VH + ++ + V NAL+ Y K G++ S F
Sbjct: 577 NKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLF 636
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSL 493
MS RRD VSWN++++GY G +E M M + TF +L ACA++++L
Sbjct: 637 SSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAAL 696
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E+G ++H F IR+ E +VV AL+++Y+KC ++YA +VF S + NSMI G+
Sbjct: 697 ERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGY 756
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G +ALE+F M++ G PDH+TF +L AC H G V L +F+ M +GI+P
Sbjct: 757 ARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME-DHGILPH 815
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR--KNG-YATLGEWAAR 670
+EHY C+I L R G + ++++++NRMP P + R + CR K+G LG+ A+R
Sbjct: 816 IEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASR 875
Query: 671 RLNELNPWAPFQFKITTNRF 690
L EL P P + + +N +
Sbjct: 876 MLLELEPQNPVNYVLASNFY 895
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 209/424 (49%), Gaps = 37/424 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N + Y KCG +D A +F + RD SWN ++ QNGF + + M
Sbjct: 410 IALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQ 469
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+S + + L S A L +Q+H VK G + + ++LV YG C ++
Sbjct: 470 GCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSE 529
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNG--KEAVVMFFKMLREDIRPLNFTFANALFAC 254
+ +F+ + + VSWN I+ +V+ + E+V +F M+R + P TF N L A
Sbjct: 530 SWEIFNSMAEHDIVSWNSIM-GVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSAL 588
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW 313
S LS G Q+H V++K D+ V +L Y K G ++ L R+ +SW
Sbjct: 589 SPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSW 648
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
S++SGY +G + +E +D V+LM + +
Sbjct: 649 NSMISGYIYNGHL-------------------------------QETMDCVWLMMHSNQM 677
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D T ++LN CA ++ ++ G E+H F R+ S++ V +ALLDMY KCG + A
Sbjct: 678 LDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKV 737
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISS 492
F MSQ +++ SWN++++GYAR G E+A+ F EMQ P TF ++L+AC++
Sbjct: 738 FNSMSQ-KNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGL 796
Query: 493 LEQG 496
+++G
Sbjct: 797 VDRG 800
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 159/600 (26%), Positives = 284/600 (47%), Gaps = 59/600 (9%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+L LV T +FL N + Y K L AR +FD M ER+ SW ++ Y +G
Sbjct: 77 RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136
Query: 123 FPGRTLELFLDMNHSGVSANQ---ITYANVLRS--SAEELELGVSKQLHGLIVKRGFCGN 177
+F M G ++ T+ +VLR+ A L + Q+HGL+ K + N
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196
Query: 178 VILESSLVDAYGKCMV--MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+ ++L+ YG C V A+++FD ++ ++WN ++ Y G +F M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256
Query: 236 LRED----IRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMY 289
L +D +RP TF + + A S LSS G+ Q+ ++K GS +++Y
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKS---------GSSSDLY 306
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
V +++VS +A G + EA+++F + ERN ++ N ++
Sbjct: 307 VG----------------------SALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIV 344
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS----EIKMGKEVHGFIHRN 405
G + +EA+ +F+ + + ++ T ++L+ A S + G+EVHG I R
Sbjct: 345 GLVKQHCSEEAVG-IFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRT 403
Query: 406 DYSS-NIFVSNALLDMYRKCGNL-RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
I +SN L++MY KCG + +++R+ +++ RD+VSWN +++ + G E AM
Sbjct: 404 GLIDLKIALSNGLVNMYAKCGAIDKASRV--FRLLCARDRVSWNTIISVLDQNGFCEGAM 461
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
++ M Q PS F + L++CA++ L G+Q+HC ++ +++ ALV++Y
Sbjct: 462 MNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMY 521
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG--REALEVFGLMKKEGIKPDHIT 580
C + +F + D++ NS I+G + E++EVF M + G+ P+ +T
Sbjct: 522 GDCGARSESWEIFNSMAEHDIVSWNS-IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVT 580
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L A ++L Q ++ K+G I ++ Y + G M E + M
Sbjct: 581 FVNLLSALSPLSVLELGKQVH-AVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSM 639
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 172/322 (53%), Gaps = 6/322 (1%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS + + +++ + V + + N ++ YG CG ++ +F+ M E D SW
Sbjct: 486 CASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSW 545
Query: 112 NAMLGAYTQNGFP-GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
N+++G + P ++E+F +M SG++ N++T+ N+L + + L + KQ+H +++
Sbjct: 546 NSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVL 605
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAV 229
K G + ++++L+ Y K M ++F + ++AVSWN ++ Y+ G+ +E +
Sbjct: 606 KHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETM 665
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+ M+ + TF+ L AC+ +++ GM++H I+ E D VV +L +MY
Sbjct: 666 DCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMY 725
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWN 345
KCGR++ A + + ++N SW S++SGYA G +A E+F EM +++
Sbjct: 726 SKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFV 785
Query: 346 AMLAGYTRSLLWKEALDFVFLM 367
++L+ + + L LD+ +M
Sbjct: 786 SVLSACSHAGLVDRGLDYFEMM 807
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 31/336 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + CY K G++D LF M RD SWN+M+ Y NG T++ M HS
Sbjct: 617 NALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQ 676
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ T++ VL + A L ++H ++ +V++ES+L+D Y KC + A +
Sbjct: 677 MLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASK 736
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS- 258
+F+ + KN SWN ++ Y G G++A+ +F +M R P + TF + L ACS
Sbjct: 737 VFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGL 796
Query: 259 -----SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS 312
+E M+ HG++ I+ + ++ + G+L + +++ P + N +
Sbjct: 797 VDRGLDYFEMMEDHGILPHIEH------YSCVIDLLGRAGKLLKIQEYINRMPMKPNTLI 850
Query: 313 WTSIVSGYAIS---GRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
W +++ S RI +EA + E+ +N +++ Y + W++
Sbjct: 851 WRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAA 910
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
M + AG S + +G VH FI
Sbjct: 911 MGGAAMKKE-----------AGQSWVTLGDGVHTFI 935
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 387 AGLSEIKMGKE-----VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
AGL + G+E +H + + + ++F+SN L+++Y K L +AR F M + R
Sbjct: 62 AGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLE-R 120
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE----TRPSKFTFETLLAACANISS--LEQ 495
+ VSW +++GY G ++EA F M WE +RP+ FTF ++L AC + L
Sbjct: 121 NAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAF 180
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCC--LEYAIRVFKESSSLDVIICNSMILGF 553
Q+H V + Y N AL+ +Y C A +VF + D+I N+++ +
Sbjct: 181 AVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVY 240
Query: 554 CHNERGREALEVFGLMKKEG----IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
+F M + ++P+ TF ++ A L + K G
Sbjct: 241 AKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSG 300
Query: 610 IIPQLEHYECMIKLYCRYGYMKELED-FVN 638
L ++ + R+G + E +D F+N
Sbjct: 301 SSSDLYVGSALVSAFARHGMLDEAKDIFIN 330
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+ S++ + ++ + CAS A+ ++ + + V + + ++ Y KCG +
Sbjct: 672 MHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRI 731
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D A +F+ M +++ SWN+M+ Y ++G + LE+F +M +G + +T+ +VL +
Sbjct: 732 DYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSAC 791
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSW 212
+ + ++ G ++ S ++D G+ + + + + K N + W
Sbjct: 792 SHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIW 851
Query: 213 NVIVR--RYLVAGN----GKEAVVMFFKMLREDIRPLNFTFANALFACS 255
++ R G+ GKEA M ++ E P+N+ A+ +A +
Sbjct: 852 RTVLVACRQSKDGDRIDLGKEASRMLLEL--EPQNPVNYVLASNFYAAT 898
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 197/657 (29%), Positives = 318/657 (48%), Gaps = 50/657 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L A L C+ + R++ S + L N I Y KCG+L DA+
Sbjct: 139 PNCHALIA-LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 197
Query: 99 LFDEMP---ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSA 154
FD +P +RD +WNAM+ A+ +NG L+LF DM+ G N +T+ +VL S
Sbjct: 198 AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCV 257
Query: 155 EE--LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF----DDIQNKN 208
E L L + +HG IV G + ++LVD+YGK + DA +F D+ + +
Sbjct: 258 EAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTS 317
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V+ + ++ G +E++ +FF M E +P T + L ACS L
Sbjct: 318 LVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ---------- 367
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+GS T LE A ++ R+ + T++++ YA S +
Sbjct: 368 -------------VGSATAFV-----LEQAMEVVSAT--RDNVLGTTLLTTYARSNDLPR 407
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
AR F+ + +V+SWNAM A Y + +EAL M T L CA
Sbjct: 408 ARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAA 467
Query: 389 L---SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKV 444
+ +GK + + + V+NA L+MY KCG+L AR F ++S RRD +
Sbjct: 468 YPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCI 527
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCF 502
+WN++L Y G +EA F M+ E +P+K TF +L A + +S+ QG++IH
Sbjct: 528 TWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHAR 587
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS--LDVIICNSMILGFCHNERGR 560
V+ N +E + V + AL+ +Y KC L+ A +F +SSS DVI S+I G+ +
Sbjct: 588 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAE 647
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL++F M+++G++P+H+TF L AC H G ++ + M +GI+P +H+ C+
Sbjct: 648 RALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCI 707
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G + E E + R + + + D C+ + GE A R+ +L+P
Sbjct: 708 VDLLGRCGRLDEAEKLLERTSQADVITWM-ALLDACKNSKELERGERCAERIMQLDP 763
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 265/585 (45%), Gaps = 63/585 (10%)
Query: 26 LTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRA 83
LT +S + + S Y L Q C +A+ + ++L +++++ FL +
Sbjct: 27 LTAAVSRIIADQGHCAPSTYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDL 86
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I + KCGNL +A L D S AM+ A+ ++G P + +ELF M V N
Sbjct: 87 IVMHAKCGNLAEAEALADRFASV--YSCTAMIRAWMEHGRPDKAMELFDRME---VRPNC 141
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
++ + + L +++H I R F N +L ++L+ Y KC + DA++ FD
Sbjct: 142 HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDR 201
Query: 204 I---QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFAC--SFL 257
+ ++ V+WN ++ +L G+ +EA+ +F M R+ P N TF + L +C + L
Sbjct: 202 LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGL 261
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S + IHG I+ E + V +L + Y K G L+DA W
Sbjct: 262 LSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDA--------------W---- 303
Query: 318 SGYAISGRIREARELF----NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
E+F +E P ++++ +AM++ ++ +E+L F M
Sbjct: 304 -------------EVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTK 350
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN----DYSSNIFVSNALLDMYRKCGNLRS 429
VTL +LN C S +++G + + + + + LL Y + +L
Sbjct: 351 PSGVTLVSVLNAC---SMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPR 407
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
AR F + Q D VSWNA+ Y + +S EA+ F M E RPS TF T L ACA
Sbjct: 408 ARATFDAI-QSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACA 466
Query: 489 NI---SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL--DV 543
++ GK+I + E + A + +Y KC L A VF+ S D
Sbjct: 467 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDC 526
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLA 587
I NSM+ + H+ G+EA E+F M+ E +KP+ +TF +L A
Sbjct: 527 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA 571
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 27/300 (9%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFI--HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
T G +L C L +K G+ +H I R D ++ F+++ L+ M+ KCGNL A
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAE---- 100
Query: 436 QMSQRRDKV-SWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLE 494
++ R V S A++ + G+ ++AM F M E RP+ L+ AC+ + +L
Sbjct: 101 ALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRM--EVRPNCHALIALVNACSCLGNLA 158
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK---ESSSLDVIICNSMIL 551
G++IH + +E N V AL+ +Y+KC L A + F +S DV+ N+MI
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218
Query: 552 GFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG- 609
F N REAL++F M ++G P+ +TF +L +C+ G + L + +R +G
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSL-----EDVRAIHGR 273
Query: 610 IIPQLEHYECMIK--LYCRYGYMKELED----FVNRMPFNPTVPML--RKIFDKCRKNGY 661
I+ E ++ L YG + L+D F+ + P+ ++ + C +NG+
Sbjct: 274 IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGW 333
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 183/621 (29%), Positives = 330/621 (53%), Gaps = 41/621 (6%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
A++L + L+ V LL + + Y G+L + F + ++ SWN+M+ AY +
Sbjct: 67 AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126
Query: 121 NGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G +++ ++ + SGV + T+ VL++ L L +++H ++K GF +V
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEHDVY 183
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ +SL+ Y + + A ++F D+ ++ SWN ++ + GN EA+ + +M E+
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
++ T ++ L C+ + G+ +H +IK E D V +L MY K GRL
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRL---- 299
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
++A+ +F+ M R+++SWN+++A Y ++
Sbjct: 300 ---------------------------QDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVT 332
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALL 418
AL F M D +T+ + ++ LS+ ++G+ VHGF+ R + +I + NAL+
Sbjct: 333 ALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALV 392
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR---P 475
+MY K G++ AR F Q+ R D +SWN ++TGYA+ G + EA+ +++ M+ E R P
Sbjct: 393 NMYAKLGSIDCARAVFEQLPSR-DVISWNTLITGYAQNGLASEAIDAYNMME-EGRTIVP 450
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
++ T+ ++L A +++ +L+QG +IH +I+NC ++V L+++Y KC LE A+ +F
Sbjct: 451 NQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLF 510
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E + N++I + G +AL++F M+ +G+K DHITF +L AC H G V
Sbjct: 511 YEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVD 570
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
A FD+M+ +Y I P L+HY CM+ L+ R GY+++ + V+ MP + +
Sbjct: 571 EAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAA 630
Query: 656 CRKNGYATLGEWAARRLNELN 676
CR +G A LG +A+ RL E++
Sbjct: 631 CRIHGNAELGTFASDRLLEVD 651
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 279/565 (49%), Gaps = 33/565 (5%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
ML Y ++ L F M H V + +L+ + +L K++HG ++ G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F N+ + +V+ Y KC + DA MFD + ++ V WN ++ Y G K A+++
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M E RP + T + L A + GM +HG +++ FE V +L +MY KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+ AR +F+ M R V+SWN+M+ GY +
Sbjct: 181 S-------------------------------VSIARVIFDGMDHRTVVSWNSMIDGYVQ 209
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
S + A+ M VT+ L+ CA L +++ GK VH + + S++ V
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
N+L+ MY KC + A F + + + VSWNA++ GYA+ G EA+ +F EMQ
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNL-RNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRN 328
Query: 474 -RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+P FT +++ A A +S Q K IH VIR + NV ALV++Y KC + A
Sbjct: 329 IKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTAR 388
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
++F ++ VI N+MI G+ + G+ ++E+F MKK IKP+ ITF L AC H G
Sbjct: 389 KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSG 448
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
V+ L FF+SM+ YGI P ++HY M+ L R G + + DF+ +MP P + + +
Sbjct: 449 LVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAM 508
Query: 653 FDKCRKNGYATLGEWAARRLNELNP 677
C+ + LGE AA + +LNP
Sbjct: 509 LGACKIHKNVDLGEKAAFEIFKLNP 533
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 278/565 (49%), Gaps = 53/565 (9%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S PV Y+ + +L +LC + + +++ +++T + +F + + Y KC ++D
Sbjct: 25 SVRPVVYN-FTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQIND 83
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +FD MPERD WN M+ Y QNGF L L L M+ G + IT ++L + A+
Sbjct: 84 AYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVAD 143
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L + +HG +++ GF V + ++LVD Y KC ++ AR +FD + ++ VSWN +
Sbjct: 144 TRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSM 203
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y+ +G+ + A+++F KML E ++P N T AL AC+ L G +H ++ ++
Sbjct: 204 IDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKL 263
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ D V+ SL MY KC R++ A + + ++SW +++ GYA +G + EA F E
Sbjct: 264 DSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCE 323
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M RN+ D T+ ++ A LS +
Sbjct: 324 MQSRNIKP-------------------------------DSFTMVSVIPALAELSIPRQA 352
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K +HG + R N+FV AL+DMY KCG + +AR F M+ R ++WNA++ GY
Sbjct: 353 KWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARH-VITWNAMIDGYGT 411
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFV--IRNCYEINV 512
G + ++ F EM+ T +P+ TF L+AC++ +E+G CF ++ Y I
Sbjct: 412 HGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL---CFFESMKKDYGIEP 468
Query: 513 VCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG-----REALEV 565
GA+V++ + L A ++ I +LG C + + A E+
Sbjct: 469 TMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEI 528
Query: 566 FGLMKKEGIKPDHITFHGILLACIH 590
F L PD +H +LLA I+
Sbjct: 529 FKL------NPDDGGYH-VLLANIY 546
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 41/357 (11%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+V+ KL+S+ V ++N I Y KC +D A +F + + SWNAM+
Sbjct: 257 LVDQLKLDSD---------VSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILG 307
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Y QNG L F +M + + T +V+ + AE +K +HGL+++R N
Sbjct: 308 YAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKN 367
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
V + ++LVD Y KC + AR++FD + ++ ++WN ++ Y G GK +V +F +M +
Sbjct: 368 VFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKK 427
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVLGSLTEMYV 290
I+P + TF AL ACS EG+ + +G+ +D G++ ++
Sbjct: 428 GTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDH------YGAMVDLLG 481
Query: 291 KCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWN 345
+ GRL A + + P + I + +++ I + + A E+F P+ ++
Sbjct: 482 RAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG--GYH 539
Query: 346 AMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+LA Y + +W + +M K+ L G S +++G EVH F
Sbjct: 540 VLLANIYATASMWGKVAKVRTIMEKSG-----------LQKTPGCSLVEIGNEVHSF 585
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 292/565 (51%), Gaps = 41/565 (7%)
Query: 131 FLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
L+ HS + A YA++L++ + Q H +VK G + + +SL+ Y
Sbjct: 48 ILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYF 107
Query: 190 KCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
K M + RR+FD K+A+SW ++ Y+ +A+ +F +M+ + FT +
Sbjct: 108 KLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLS 167
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+A+ ACS L G HGV+I FE + + +L +Y G+ +P
Sbjct: 168 SAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY----------GVNREP--- 214
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+AR +F+EMPE +VI W A+L+ ++++ L++EAL + M
Sbjct: 215 ------------------VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 369 KTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ + D T G +L C L +K GKE+HG + N SN+ V ++LLDMY KCG++
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
R AR F MS +++ VSW+A+L GY + G+ E+A+ F EM+ + F T+L AC
Sbjct: 317 REARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREME---EKDLYCFGTVLKAC 372
Query: 488 ANISSLEQGKQIHC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
A ++++ GK+IH +V R C+ NV+ AL+++Y K C++ A RV+ + S ++I
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITW 431
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
N+M+ N RG EA+ F M K+GIKPD+I+F IL AC H G V +F M
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT-LG 665
YGI P EHY CMI L R G +E E+ + R + + C N A+ +
Sbjct: 492 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVA 551
Query: 666 EWAARRLNELNPWAPFQFKITTNRF 690
E A+R+ EL P + + +N +
Sbjct: 552 ERIAKRMMELEPKYHMSYVLLSNMY 576
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 233/466 (50%), Gaps = 39/466 (8%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG-NLD 94
S+ P + LYA L Q C + + + +++V + N + Y K G +
Sbjct: 55 SEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMR 114
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ R +FD +D SW +M+ Y + LE+F++M G+ AN+ T ++ +++ +
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACS 174
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E E+ + + HG+++ GF N + S+L YG DARR+FD++ + + W
Sbjct: 175 ELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 215 IVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ + +EA+ +F+ M R + + P TF L AC L +G +IHG +I
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ VV SL +MY KCG + +AR + + ++N +SW++++ GY +G +A E+F
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
EM E+ D G +L CAGL+ ++
Sbjct: 355 REMEEK-----------------------------------DLYCFGTVLKACAGLAAVR 379
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+GKE+HG R N+ V +AL+D+Y K G + SA + +MS R+ ++WNA+L+
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI-RNMITWNAMLSAL 438
Query: 454 ARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
A+ G+ EEA++ F++M + +P +F +L AC + +++G+
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 144/278 (51%), Gaps = 5/278 (1%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S + + C + + + + +++ L+T V + + ++ YGKCG++ +AR +F+
Sbjct: 266 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M +++ SW+A+LG Y QNG + +E+F +M + + VL++ A + +
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLG 381
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++HG V+RG GNVI+ES+L+D YGK + A R++ + +N ++WN ++
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVV 281
G G+EAV F M+++ I+P +F L AC EG ++ K +
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+ ++ + G E+A LL++ + RN S ++ G
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
Length = 740
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/649 (27%), Positives = 313/649 (48%), Gaps = 47/649 (7%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+L +A +FD MPERD SWN M+ + GF + L ++ M G ++ T A+
Sbjct: 50 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 109
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-ARRMFDDIQNK 207
VL + ++ L+ + HG+ VK G N+ + ++L+ Y KC + D R+F+ +
Sbjct: 110 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 169
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF------ACSFLSSPY 261
N VS+ ++ EAV MF M + ++ + +N L C LS Y
Sbjct: 170 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 229
Query: 262 E---GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QIH + +++ F GD + SL E+Y K + A + + E N++SW ++
Sbjct: 230 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 289
Query: 319 GYAI-----------------------------------SGRIREARELFNEMPERNVIS 343
G+ SG + R +F+ +P+ +V +
Sbjct: 290 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA 349
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAML+GY+ ++EA+ M+ D+ TL +IL+ CA L ++ GK++HG +
Sbjct: 350 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 409
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R + S N + + L+ +Y +C + + F D WN++++G+ +A+
Sbjct: 410 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 469
Query: 464 TSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F M P++ +F T+L++C+ + SL G+Q H V+++ Y + AL ++
Sbjct: 470 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 529
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++ A + F + +I N MI G+ HN RG EA+ ++ M G KPD ITF
Sbjct: 530 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 589
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V+ L+ SM+ +GI P+L+HY C++ R G +++ E P
Sbjct: 590 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATP 649
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + + + CR +G +L A +L L+P + + + +N +
Sbjct: 650 YKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 698
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 188/397 (47%), Gaps = 18/397 (4%)
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ D + L ++Y++CG + AR + D+ R++ SW + ++ G + EA E+F+
Sbjct: 3 MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFD 62
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
MPER+V+SWN M++ R ++AL M + TL +L+ C+ + +
Sbjct: 63 GMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVF 122
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G HG + NIFV NALL MY KCG + + ++ + ++VS+ AV+ G A
Sbjct: 123 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 182
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLA------ACANISSL---EQGKQIHCFVI 504
R + EA+ F M + + +L+ C ++S + E GKQIHC +
Sbjct: 183 RENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLAL 242
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R + ++ +L+E+Y K + A +F E ++V+ N MI+GF R +++E
Sbjct: 243 RLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE 302
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
M+ G +P+ +T +L AC G+V+ + F S+ P + + M+ Y
Sbjct: 303 FLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGY 357
Query: 625 CRYGYMKELEDFVNRMPFN---PTVPMLRKIFDKCRK 658
Y + +E +M F P L I C +
Sbjct: 358 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 394
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 220/474 (46%), Gaps = 55/474 (11%)
Query: 77 VFLLNRAIECYGKCGNLDD-ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+F+ N + Y KCG + D +F+ + + + S+ A++G + +++F M
Sbjct: 139 IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 198
Query: 136 HSGVSANQITYANVLRSSA--------EEL---ELGVSKQLHGLIVKRGFCGNVILESSL 184
GV + + +N+L SA E+ ELG KQ+H L ++ GF G++ L +SL
Sbjct: 199 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG--KQIHCLALRLGFGGDLHLNNSL 256
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++ Y K M A +F ++ N VSWN+++ + ++V +M +P
Sbjct: 257 LEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNE 316
Query: 245 FTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLG-------------------- 283
T + L AC F S E G +I I + + +L
Sbjct: 317 VTCISVLGAC-FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 375
Query: 284 --------SLTEMYVKCGR---LEDARGLLDQPDERNIISWTSIVSG----YAISGRIRE 328
+L+ + C R LE + + I + IVSG Y+ ++
Sbjct: 376 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 435
Query: 329 ARELFNE-MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVC 386
+ +F++ + E ++ WN+M++G+ ++L +AL M +T ++ + +L+ C
Sbjct: 436 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 495
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ L + G++ HG + ++ Y S+ FV AL DMY KCG + SAR F+ R++ V W
Sbjct: 496 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR-QFFDAVLRKNTVIW 554
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
N ++ GY G+ +EA+ + +M +P TF ++L AC++ +E G +I
Sbjct: 555 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 608
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + C+ +++ R+ +V F+ + Y KCG +D AR FD +
Sbjct: 488 FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVL 547
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELGVS 162
++ WN M+ Y NG + L+ M SG + IT+ +VL + + +E G+
Sbjct: 548 RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLE 607
Query: 163 -----KQLHGL--IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNV 214
+++HG+ + C +VD G+ + DA ++ + K ++V W +
Sbjct: 608 ILSSMQRIHGIEPELDHYIC--------IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEI 659
Query: 215 IVRRYLVAGNGKEAVVMFFKMLRED 239
++ V G+ A + K++R D
Sbjct: 660 LLSSCRVHGDVSLARRVAEKLMRLD 684
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/624 (28%), Positives = 317/624 (50%), Gaps = 42/624 (6%)
Query: 60 EARKLES----NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG-GSWNAM 114
E +++ S N++ F P FL I+ Y KCG +AR LF ++ +R +WN M
Sbjct: 157 EGKQIHSYIVRNMLNFDP----FLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVM 212
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+G + +NG +LE +L V ++ L + + + KQ+H +K GF
Sbjct: 213 IGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGF 272
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
+ + +SL+ YGKC ++ A ++F+++ +K WN ++ Y+ G +A+ ++ +
Sbjct: 273 EDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQ 332
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M + +FT N L + S G IH I+K + + +L MY K G
Sbjct: 333 MKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGD 392
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
S YA S +F+ M ER+V++W ++++G+ ++
Sbjct: 393 -----------------------SNYANS--------IFSTMKERDVVAWGSVISGFCQN 421
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
+KEALDF M D + I++ C GL ++ +G +HGF+ ++ ++FV+
Sbjct: 422 RKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVA 481
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWET 473
++LLDMY K G A F M ++ V+WN++++ Y R + ++ FS+ ++ +
Sbjct: 482 SSLLDMYSKFGFPERAGNIFSDMP-LKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDL 540
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P +F ++LAA +++++L +GK +H +++R ++ L+++Y KC L+YA
Sbjct: 541 YPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQH 600
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F+ S +++ NSMI G+ + +A+E+F M+ GIKPD +TF +L +C H G
Sbjct: 601 IFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGL 660
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
++ L F+ M+ K+GI P++EHY ++ LY R G + + FV MP P + +
Sbjct: 661 IEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLL 720
Query: 654 DKCRKNGYATLGEWAARRLNELNP 677
C+ + LGE A +L + P
Sbjct: 721 CSCKIHLNLELGEMVANKLLNMEP 744
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/603 (23%), Positives = 271/603 (44%), Gaps = 60/603 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L + CAS + + + S+++T ++ + I Y KCG DA +FD++P
Sbjct: 56 YPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLP 115
Query: 105 ER-----DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
+ D WN+++ Y + G + F M SG
Sbjct: 116 KSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKEG----------------- 158
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRR 218
KQ+H IV+ + LE++L+D Y KC T+AR +F ++++ N V+WNV++
Sbjct: 159 ---KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGG 215
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ G + ++ + E+++ ++ +F L AC G Q+H IK+ FE D
Sbjct: 216 FGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDD 275
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL MY KC +E A + ++ ++ I W +++S Y +G +A ++ +M
Sbjct: 276 PYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKL 335
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V+S D T+ +L + +G+ +
Sbjct: 336 CTVLS-------------------------------DSFTILNVLTSSSMAGLYDLGRLI 364
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I + S+I + +ALL MY K G+ A F M + RD V+W +V++G+ + +
Sbjct: 365 HTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTM-KERDVVAWGSVISGFCQNRK 423
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EA+ F M+ + +P ++++AC + ++ G IH FVI++ +++V +
Sbjct: 424 YKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASS 483
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y+K E A +F + +++ NS+I +C N ++ +F + + + PD
Sbjct: 484 LLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPD 543
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
++F + LA I L + + I L+ +I +Y + G +K +
Sbjct: 544 SVSFTSV-LAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIF 602
Query: 638 NRM 640
R+
Sbjct: 603 ERI 605
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 231/532 (43%), Gaps = 64/532 (12%)
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V + TY ++L++ A L K +H I+ G + + SSL++ Y KC TD
Sbjct: 47 SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTD 106
Query: 197 ARRMFDDIQNKNAVS------WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
A ++FD + K+ VS WN I+ Y G +E +V F +M
Sbjct: 107 AVKVFDQLP-KSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM--------------- 150
Query: 251 LFACSFLSSPY-EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDER 308
SS Y EG QIH I++ D + +L + Y KCGR +AR L + D
Sbjct: 151 ------QSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRS 204
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
NI++W N M+ G+ + LW+ +L++ L +
Sbjct: 205 NIVAW-------------------------------NVMIGGFGENGLWENSLEYYLLAK 233
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ + L+ C + GK+VH + + + +V +LL MY KC +
Sbjct: 234 TENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIE 293
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAAC 487
SA F ++ + ++ WNA+++ Y G + +A+ + +M+ T S FT +L +
Sbjct: 294 SAEKVFNEVPDKEIEL-WNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSS 352
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+ + G+ IH +++ + ++ + AL+ +Y+K YA +F DV+
Sbjct: 353 SMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWG 412
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
S+I GFC N + +EAL+ F M+ + +KPD I+ AC V L K
Sbjct: 413 SVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCT-IHGFVIK 471
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
G+ + ++ +Y ++G+ + + + MP V I CR N
Sbjct: 472 SGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNN 523
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 28/287 (9%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
+L CA LS ++ GK +H I S+ +++++L+++Y KCG A F Q+ +
Sbjct: 59 LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118
Query: 441 ---RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGK 497
D WN+++ GY R GQ EE M F MQ S ++GK
Sbjct: 119 VSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQ-------------------SSGYKEGK 159
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHN 556
QIH +++RN + AL++ Y KC A +FK+ +++ N MI GF N
Sbjct: 160 QIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGEN 219
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF-DSMRCKYGIIPQLE 615
+LE + L K E +K +F L AC V Q D+++ + P +
Sbjct: 220 GLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV- 278
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
+ ++ +Y + ++ E N +P + + + + NGYA
Sbjct: 279 -HTSLLTMYGKCQMIESAEKVFNEVP-DKEIELWNALISAYVGNGYA 323
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + +S A+++ + + LV + + + N I+ Y KCG L A+ +F+ +
Sbjct: 547 FTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERIS 606
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E++ +WN+M+G Y +G + +ELF +M SG+ + +T+ ++L S +
Sbjct: 607 EKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLH 666
Query: 165 LHGLI-VKRGFCGNVILESSLVDAYGKCMVMTDA 197
L ++ +K G + ++VD YG+ + DA
Sbjct: 667 LFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDA 700
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 306/642 (47%), Gaps = 32/642 (4%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S EP Y LF+LC +A+ + ++ + + L N + + G
Sbjct: 88 SAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWH 147
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F +MPERD SWN M+G Y + G L+L+ M +GV + T+ VLRS
Sbjct: 148 AWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGG 207
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ + +++H +++ GF V + ++L+ Y KC + AR++FD + + +SWN +
Sbjct: 208 VPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAM 267
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + G + +F ML+++++P T + A LS ++HG+ +K F
Sbjct: 268 IAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGF 327
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D SL +MY A G + +AR +F+
Sbjct: 328 ATDVAFCNSLIQMY-------------------------------ASLGMMGQARTVFSR 356
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M R+ +SW AM++GY ++ +AL+ LM D +T+ L CA L + +G
Sbjct: 357 MDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVG 416
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H + S + V+NALL+MY K + A I ++ +D VSW++++ G+
Sbjct: 417 VKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKA-IEVFKCMPEKDVVSWSSMIAGFCF 475
Query: 456 RGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
++ EA+ F M + +P+ TF LAACA +L GK+IH V+R
Sbjct: 476 NHRNFEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLP 535
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC YA F + DV+ N MI GF + G AL F M K G
Sbjct: 536 NALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGEC 595
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF +L AC G V + F SM KY I+P L+HY CM+ L R G + E +
Sbjct: 596 PDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYN 655
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F+N MP P + + + CR + + LGE AA+ + EL P
Sbjct: 656 FINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEP 697
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 175/389 (44%), Gaps = 27/389 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N +E Y K +D A +F MPE+D SW++M+ + F R E H
Sbjct: 432 VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFC---FNHRNFEALYYFRH 488
Query: 137 --SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ V N +T+ L + A L K++H +++ G L ++L+D Y KC
Sbjct: 489 MLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQT 548
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A F K+ VSWN+++ ++ GNG+ A+ F +M++ P TF L AC
Sbjct: 549 GYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCAC 608
Query: 255 SFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS 312
S EG ++ H + K + + ++ + G+L +A +++ P +
Sbjct: 609 SRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAV 668
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL--LWKEA--LDFVFLMR 368
W ++++G RI EL E+ + V+ AGY L L+ +A D + +R
Sbjct: 669 WGALLNGC----RIHRHVEL-GELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVR 723
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD-MYRKCGNL 427
KT ++ L+ +G S +++ VH F+ ++ I N +L+ +Y + +
Sbjct: 724 KTMREKG-------LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYER---M 773
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+++ + DKV + + G++ R
Sbjct: 774 KASGCAPVESHSPEDKVLKDDIFCGHSER 802
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/643 (28%), Positives = 306/643 (47%), Gaps = 45/643 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD---ARGL 99
SL AHL CAS + E L LV + + R + + D AR +
Sbjct: 20 SLLAHL-DACASRANLAE---LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKV 75
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD M + WN M+ Y P LELF M SGVS + T A V +SSA
Sbjct: 76 FDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASW 135
Query: 160 ---GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+H L+ + GF ++ + S L++ YG + DAR++F+++ ++ VSW +++
Sbjct: 136 KGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMI 195
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ G + +M E +P T + L AC + + +G+ ++ + + E
Sbjct: 196 SAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIE 255
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + +L MYVKCG + DA W + F M
Sbjct: 256 ADVDIRNALIGMYVKCGCMSDA--------------WKT-----------------FKGM 284
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P RN SWN ++ G+ ++ KEAL M D +TL +L+ A L +++ G+
Sbjct: 285 PIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGR 344
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H +I ++ +I + N+L++MY KCG++ +A I F M+ RRD VSW A++ GY +
Sbjct: 345 YLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMA-RRDIVSWTAMVCGYVKG 403
Query: 457 GQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
Q A F +M+ + S+ +LL+AC+ + +L++G++IH ++ ++
Sbjct: 404 LQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLE 463
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGI 574
ALV++Y KC C++ A +F + N+MI G +G+EA+ +F L+K
Sbjct: 464 SALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDP 523
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
KPD IT +L AC H G V L +F+ M GI+P EHY C++ L R G + E
Sbjct: 524 KPDAITLKVVLCACTHVGMVDEGLHYFNLM-LTLGIVPDNEHYGCIVDLLGRAGLLDEAY 582
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+F+ +MP P + + CR + LG+ + + +L P
Sbjct: 583 NFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAP 625
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/647 (27%), Positives = 319/647 (49%), Gaps = 37/647 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C V A+ + +++ +F N + Y K G DA LFDEMP
Sbjct: 52 YGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP 111
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ S+ + Y G L+ ++ G N + + L+ + +
Sbjct: 112 ERNNVSYVTLTQGYACQDPVG----LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWW 167
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH IVK G+ N + ++L++AY C + AR +F+ I K+ V W IV Y+ G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++++ + +M + P N+TF AL A L + + +HG I+K +E D V
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG 287
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L ++Y + G + DA ++FNEMP+ +V+ W
Sbjct: 288 LLQLYTQLGDMSDAF-------------------------------KVFNEMPKNDVVPW 316
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ M+A + ++ +A+D MR+ ++ TL ILN CA +G+++HG + +
Sbjct: 317 SFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +++VSNAL+D+Y KC + +A F ++S + + VSWN V+ GY G+ +A+
Sbjct: 377 VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSK-NVVSWNTVIVGYENLGEGGKALN 435
Query: 465 SFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F E ++ + ++ TF + L ACA+++S+E G Q+H I+ V +L+++Y
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYA 495
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC ++ A VF E ++DV N++I G+ + GR+AL +F +MK KP+ +TF G
Sbjct: 496 KCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLG 555
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L C + G + F+SM C +GI P LEHY CM++L+ R G + + + + +P+
Sbjct: 556 VLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYE 615
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P+V + R + +A + ++NP + + +N +
Sbjct: 616 PSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMY 662
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 238/525 (45%), Gaps = 43/525 (8%)
Query: 120 QNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
Q GF +T E + + S V + Y +LR + + +K +H I+K+G C ++
Sbjct: 25 QCGFSVQTAESSVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDL 84
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ L++AY K DA +FD++ +N VS+ + + Y ++ V ++ ++ RE
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYAC----QDPVGLYSRLHRE 140
Query: 239 --DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
++ P FT LF L +H I+K+ ++ + V +L
Sbjct: 141 GHELNPHVFTSFLKLFVS--LDKAEICWWLHSPIVKLGYDSNAFVGAAL----------- 187
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
++ Y++ G + AR +F + ++++ W +++ Y +
Sbjct: 188 --------------------INAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
++++L + M + T L GL K VHG I + Y + V
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG 287
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
LL +Y + G++ A F +M + D V W+ ++ + + G +A+ F M + P
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVP 346
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
++FT ++L CA G+Q+H V++ ++++V AL++VY KC ++ A+++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLF 406
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E SS +V+ N++I+G+ + G +AL +F + + +TF L AC +++
Sbjct: 407 AELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASME 466
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
L +Q + K ++ +I +Y + G +K + N M
Sbjct: 467 LGVQVH-GLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEM 510
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 7/285 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L + + CA K +L +V V++ N I+ Y KC +D A
Sbjct: 346 PNEFTL-SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVK 404
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE--E 156
LF E+ ++ SWN ++ Y G G+ L +F + + VS ++T+++ L + A
Sbjct: 405 LFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ELGV Q+HGL +K V + +SL+D Y KC + A+ +F++++ + SWN ++
Sbjct: 465 MELGV--QVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALI 522
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDF 275
Y G G++A+ +F M D +P TF L CS +G +I
Sbjct: 523 SGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGI 582
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
E + ++ + G+L+ A L++ P E +++ W +++S
Sbjct: 583 EPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSA 627
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 10/290 (3%)
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D G +L C ++ K +H I + ++F +N LL+ Y K G + A
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISS 492
F +M +R + VS+ + GYA ++ + +S + E + F + L ++
Sbjct: 107 FDEMPER-NNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E +H +++ Y+ N AL+ Y+ C ++ A VF+ D+++ ++
Sbjct: 162 AEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS-MRCKYGII 611
+ N ++L++ M +G P++ TF L A I G A ++ Y +
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELD 281
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
P++ +++LY + G M + N MP N VP I C +NG+
Sbjct: 282 PRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC-QNGF 328
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/650 (27%), Positives = 321/650 (49%), Gaps = 43/650 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVT-----FYPTPPVFLLNRAIECYGKCGN 92
+P+S + YA L C+ ++ + R + +L+ Y L N I YG+C
Sbjct: 36 DPLSAAAYAALVAACSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAA 95
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
D AR +FD M +R+ SW A++ A+ QN + LF M G + ++ + +R+
Sbjct: 96 PDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRA 155
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
AE +LG+ +Q+H +K G++I++++LV Y K + D +F+ I++K+ SW
Sbjct: 156 CAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSW 215
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYE-GMQIHGVI 270
I+ G +A+ +F +M+ E + P F F + ACS + + E G QIHG+
Sbjct: 216 GSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLC 275
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K + + SL +MY +C +L+ A
Sbjct: 276 VKYKLDRNSYAGCSLGDMYARCNKLD-------------------------------SAM 304
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
++F + +++SWN+++ ++ L EA+ MR ++ D +T+ +L C G
Sbjct: 305 KVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCD 364
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ G+ +H ++ + ++ V N+L+ MY +C + SA F++ + RD V+WN++L
Sbjct: 365 ALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHE-TNDRDVVTWNSIL 423
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPS--KFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
T + E+ F + + PS + + +L+A A + E KQ+H + +
Sbjct: 424 TACVQHRHMEDVFKLFRLLH-SSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGL 482
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ + AL++ Y KC L+ A ++F+ + DV +S+I+G+ +EAL++F
Sbjct: 483 VSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFA 542
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M+ G+KP+H+TF G+L+AC G V ++ M +YGI+P EH C+I L R
Sbjct: 543 RMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARA 602
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G + E FV++MPF P + M + R + +G+ AA + ++P
Sbjct: 603 GRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDP 652
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 294/573 (51%), Gaps = 9/573 (1%)
Query: 126 RTLELFLDMNHSGVSANQITY--ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
+T L + S VS + + + A++L + + Q+H + G + +L
Sbjct: 24 KTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPK 83
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LV Y + +A+ + ++ + + WNV++ Y +E + + +M+ + IRP
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPD 143
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
FT+ + L AC G +HG I ++ V +L MY + + AR L D
Sbjct: 144 AFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFD 203
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKE 359
+ ER+ +SW ++++ YA G EA ELF++M E +VI+WN + G ++ +
Sbjct: 204 RMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVG 263
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL + MR +D V + + L C+ + I++GKE+HG + Y V N L+
Sbjct: 264 ALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLIT 323
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKF 478
MY KC +LR A I F Q ++ +WN++++GYA+ +SEEA EM +P+
Sbjct: 324 MYSKCKDLRHALIVFRQ-TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 479 TFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T ++L CA I++L+ GK+ HC+++R C++ + +LV+VY K + A +V
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDL 442
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
S D + S+I G+ + G AL +F M + GIKPDH+T +L AC H V
Sbjct: 443 MSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG 502
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
+ F M+C+YGI P L+H+ CM+ LY R G++ + +D ++ MP+ P+ + + C
Sbjct: 503 ERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACH 562
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+G +G+WAA +L E+ P P + + N +
Sbjct: 563 IHGNTQIGKWAAEKLLEMKPENPGYYVLIANMY 595
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 229/522 (43%), Gaps = 78/522 (14%)
Query: 34 LKSDEPVSYSLYAH----LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
L+S VS L H L C +A + ++ ++ ++ L+ + + Y
Sbjct: 31 LQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSA 90
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
++A+ + + WN ++ +Y +N + + M G+ + TY +V
Sbjct: 91 FNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSV 150
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L++ E L++ + +HG I + ++ + ++L+ Y + M ARR+FD + ++A
Sbjct: 151 LKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDA 210
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDI----------------------------R 241
VSWN ++ Y G EA +F KM + R
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 242 PLNF-------TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
NF L ACS + + G +IHG+ I ++G D V +L MY KC
Sbjct: 271 MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKD 330
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L A + Q +E ++ +W SI+SGYA + EA L EM ++AG+
Sbjct: 331 LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM----------LVAGFQP- 379
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFV 413
+ +TL IL +CA ++ ++ GKE H +I R + +
Sbjct: 380 --------------------NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
N+L+D+Y K G + +A+ MS +RD+V++ +++ GY +G+ A+ F EM
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG 478
Query: 473 TRPSKFTFETLLAACANISSLEQGK----QIHC-FVIRNCYE 509
+P T +L+AC++ + +G+ ++ C + IR C +
Sbjct: 479 IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQ 520
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 201/497 (40%), Gaps = 75/497 (15%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + + R + ++ +++ N I Y + N+ AR LFD M
Sbjct: 147 YPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMF 206
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV--------------- 149
ERD SWNA++ Y G ELF M SGV + IT+ +
Sbjct: 207 ERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALG 266
Query: 150 ----LRSSAEELE----------------LGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+R+ L+ + + K++HGL + + G + ++L+ Y
Sbjct: 267 LISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYS 326
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + A +F + + +WN I+ Y +EA + +ML +P + T A+
Sbjct: 327 KCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLAS 386
Query: 250 ALFACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L C+ +++ G + H I++ F+ ++ SL ++Y K G++ A+ + D +R
Sbjct: 387 ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR 446
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ +++TS++ GY G A LF EM TRS +
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEM---------------TRSGI------------ 479
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSN--ALLDMYRKCG 425
D VT+ +L+ C+ + G+ + F+ +Y + + ++D+Y + G
Sbjct: 480 ----KPDHVTVVAVLSACSHSKLVHEGERL--FMKMQCEYGIRPCLQHFSCMVDLYGRAG 533
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE---EAMTSFSEMQWETRPSKFTFET 482
L A+ + M + +W +L G ++ A EM+ E
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIAN 593
Query: 483 LLAACANISSLEQGKQI 499
+ AA + S L + + I
Sbjct: 594 MYAAAGSWSKLAEVRTI 610
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/545 (30%), Positives = 282/545 (51%), Gaps = 34/545 (6%)
Query: 149 VLRSSAEELELGVSKQLHGLI-VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L++ + ++ V ++LH ++ FC + +L + ++ Y C +D+R +FD ++ K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQI 266
N WN IV Y ++A+ +F +++ + +P NFT + AC+ L G I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+ K+D D V +L MY KCG +E+A
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEA---------------------------- 262
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+ +F+ M + V SWNA+L GY ++ ++ALD M + D D T+G +L C
Sbjct: 263 --VKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ + + G+E+HGF RN + + F+ +LL +Y CG +A++ F M + R VSW
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM-EHRSLVSW 379
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
N ++ GY++ G +EA+ F +M + +P + + AC+ +S+L GK++HCF ++
Sbjct: 380 NVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK 439
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
++ +++++Y K C+ + R+F DV N +I G+ + RG+EALE+
Sbjct: 440 AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALEL 499
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M + G+KPD TF GIL+AC H G V+ L++F+ M + I P+LEHY C++ +
Sbjct: 500 FEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLG 559
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKI 685
R G + + + MP +P + + CR +G LGE A +L EL P P + +
Sbjct: 560 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVL 619
Query: 686 TTNRF 690
+N F
Sbjct: 620 ISNLF 624
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 230/453 (50%), Gaps = 36/453 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN-RAIECYGKCGNLDDARGLFDEMPER 106
L Q C K I R+L + F+LN R I Y CG+ D+R +FD++ +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WNA++ AYT+N + +F ++ + + + T V+++ A L+LG+ + +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDA-RRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HG+ K +V + ++L+ YGKC ++ +A +R+FD + K SWN ++ Y +
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++A+ ++ +M + P FT + L ACS + S + G +IHG ++ D + S
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +Y+ CG+ A+ L D + R+++SW +++GY+ +G EA LF +M + +
Sbjct: 351 LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 410
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
++ + + C+ LS +++GKE+H F +
Sbjct: 411 -------------------------------EIAIMCVCGACSQLSALRLGKELHCFALK 439
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +IFVS++++DMY K G + ++ F ++ + +D SWN ++ GY G+ +EA+
Sbjct: 440 AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALE 498
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F +M + +P FTF +L AC++ +E G
Sbjct: 499 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 531
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 177/348 (50%), Gaps = 21/348 (6%)
Query: 273 IDF---EGDDVVLGS------LTEMYVKCGRLED---ARGLLDQPDE-----RNIISWTS 315
+DF E DDVVL S + + CG+ +D R L + + + T
Sbjct: 87 LDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTR 146
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDI 374
I++ Y++ G ++R +F+++ +N+ WNA+++ YTR+ L+++A+ F L+ T
Sbjct: 147 IITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP 206
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D TL ++ CAGL ++ +G+ +HG + D S++FV NAL+ MY KCG + A
Sbjct: 207 DNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRV 266
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+ + + SWNA+L GYA+ +A+ + +M P FT +LL AC+ + SL
Sbjct: 267 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSL 326
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV-FKESSSLDVIICNSMILG 552
G++IH F +RN ++ +L+ +Y CC +A +V F ++ N MI G
Sbjct: 327 HYGEEIHGFALRNGLAVDPFIGISLLSLYI-CCGKPFAAQVLFDGMEHRSLVSWNVMIAG 385
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ N EA+ +F M +GI+P I + AC ++L +
Sbjct: 386 YSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 433
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 163/321 (50%), Gaps = 22/321 (6%)
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG A+ LFD M R SWN M+ Y+QNG P + LF M G+ +I V
Sbjct: 358 CGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCV 417
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ ++ L + K+LH +K ++ + SS++D Y K + ++R+FD ++ K+
Sbjct: 418 CGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV 477
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SWNVI+ Y + G GKEA+ +F KMLR ++P +FTF L ACS +G++
Sbjct: 478 ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 537
Query: 270 IIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR 327
++ + + E + +M + GR++DA L+++ P + + W+S++S I G +
Sbjct: 538 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLG 597
Query: 328 EARELFNEM----PER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
++ N++ PE+ N + + + AG + W D V +R KDI
Sbjct: 598 LGEKVANKLLELEPEKPENYVLISNLFAGSGK---W----DDVRRVRGRMKDIG------ 644
Query: 382 ILNVCAGLSEIKMGKEVHGFI 402
L AG S I++G +VH F+
Sbjct: 645 -LQKDAGCSWIEVGGKVHNFL 664
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ A+ ++L + + T +F+ + I+ Y K G + ++ +FD + E+D SW
Sbjct: 421 CSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASW 480
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSK-----Q 164
N ++ Y +G LELF M G+ + T+ +L S A +E G+
Sbjct: 481 NVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLN 540
Query: 165 LHGLIVKRGFCGNVILE--SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLV 221
LH + K LE + +VD G+ + DA R+ +++ + ++ W+ ++ +
Sbjct: 541 LHNIEPK--------LEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRI 592
Query: 222 AGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACS 255
GN + K+L E +P N+ + LFA S
Sbjct: 593 HGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 627
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 292/562 (51%), Gaps = 37/562 (6%)
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Y ++G + + ++ + +S YA++L++ + + Q H +K G +
Sbjct: 35 YCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTD 94
Query: 178 VILESSLVDAYGKCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ +SL+ Y K + +ARR+FD + K+ +SW ++ Y+ K+++ +F +ML
Sbjct: 95 RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
I P FT + + ACS L G HGV++ F+ +DV+ +L +MY + ++
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVD 214
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
DA I+ +F E+P+ + I W ++++ +TR+ +
Sbjct: 215 DA-----------IL--------------------VFVELPQPDAICWTSIISAFTRNDV 243
Query: 357 WKEALDFVFLM-RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+ +AL F + M RK D T G +L C L +K GKEVH + + S N+FV +
Sbjct: 244 YDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVES 303
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
+L+DMY KC + ++ F +MS + + VSW A+L GY + G E + F E + +
Sbjct: 304 SLVDMYGKCRLVNQSQCVFDRMSVK-NLVSWTALLGGYCQNGDFESVIRIFREGK---KV 359
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
++F T+L ACA ++++ QGK++HC ++ C +VV ALV++Y KC C+++A R+F
Sbjct: 360 DTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIF 419
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
S ++I NSMI GF N RG E ++F M +EGI+PD+I+F G+L AC H G V
Sbjct: 420 VRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVD 479
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
++F +M Y I P +EHY CMI L R G ++E E+ + + +
Sbjct: 480 QGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGA 539
Query: 656 CRKNGYATLGEWAARRLNELNP 677
C + ++ E A++ EL P
Sbjct: 540 CAASPHSATAERIAKKAVELKP 561
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 255/540 (47%), Gaps = 43/540 (7%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG-NLDDARGLFDE 102
YA L Q C + + + S+ + F+ N + Y K G NL +AR +FD
Sbjct: 62 FYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDG 121
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +D SW +M+ Y + P ++LELFL+M G+ N T + V+++ + +L +
Sbjct: 122 LFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLG 181
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K HG+++ RGF N ++ ++L+D YG+ + DA +F ++ +A+ W I+ +
Sbjct: 182 KCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRN 241
Query: 223 GNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+A+ F+ M R+ + P FTF L AC L +G ++H +I G+ V
Sbjct: 242 DVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFV 301
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL +MY KC + ++ + D+ +N++SWT+++ GY +G +F E
Sbjct: 302 ESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE------ 355
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
K +D + G +L CAGL+ ++ GKEVH
Sbjct: 356 -----------------------------GKKVDTYSFGTVLRACAGLAAVRQGKEVHCQ 386
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ +AL+D+Y KCG + A F +MS R+ ++WN+++ G+A+ G+ E
Sbjct: 387 YVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSV-RNLITWNSMIYGFAQNGRGGE 445
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVCRGAL 518
F EM E RP +F +L AC++ ++QGK+ + YEI + +
Sbjct: 446 VFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFA-AMTEVYEIKPGIEHYNCM 504
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++ + LE A + + ++ D +++LG C E E +KPDH
Sbjct: 505 IDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVE-LKPDH 563
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 185/388 (47%), Gaps = 41/388 (10%)
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++N + ++ +I +Y +G+ EA+ + + + F +A+ L C+ S G
Sbjct: 22 LENPQSKAYKII--QYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHG 79
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCG-RLEDARGLLDQPDERNIISWTSIVSGYAI 322
+Q H IK + D V SL +Y K G L +AR + D +++ISWTS+++GY
Sbjct: 80 IQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVK 139
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+ +++ ELF EM + + + TL +
Sbjct: 140 VEKPKKSLELFLEMLGLGI-------------------------------EPNGFTLSAV 168
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ C+GL ++++GK HG + + N +S AL+DMY + + A + F ++ Q D
Sbjct: 169 IKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQ-PD 227
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIH 500
+ W ++++ + R ++A+ F M + P FTF T+L AC N+ L+QGK++H
Sbjct: 228 AICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVH 287
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
VI + NV +LV++Y KC + + VF S +++ +++ G+C N
Sbjct: 288 AKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFE 347
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLAC 588
+ +F +EG K D +F +L AC
Sbjct: 348 SVIRIF----REGKKVDTYSFGTVLRAC 371
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/618 (28%), Positives = 300/618 (48%), Gaps = 38/618 (6%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+P V L + + K G L DA LFD MP ++ +W +++ YT+NG P L +F D
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M SGV+ N L + A+ L +Q+H L V+ GF G+ + S L++ Y +C
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGS 164
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A+ +FD + + + V + ++ + G + A +ML++ ++P T L A
Sbjct: 165 LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C + G QIHG +IK GL Q ++ S
Sbjct: 225 CPRVL----GQQIHGYLIK-------------------------KIGLRSQ----SVYSS 251
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T+++ Y+ +G + A+ +F+ + +NV+SW +M+ Y R +EAL M D
Sbjct: 252 TALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVD 311
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++ L ++L C I +G+++H ++D ++I VSNALL MY + G +
Sbjct: 312 PNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 368
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
++ + D VSW ++ + G E+A+ +M E P+ + F ++L++CA+++S
Sbjct: 369 LNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L+QG Q HC ++ + + AL+ +Y+KC + A F + DV NS+I G
Sbjct: 428 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 487
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ +ALEVF M+ GIKPD TF G+L+ C H G V+ FF M +Y P
Sbjct: 488 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 547
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
HY CMI + R G E +N MPF P + + + C+ + +G+ AA RL
Sbjct: 548 APSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRL 607
Query: 673 NELNPWAPFQFKITTNRF 690
EL+ + + +N +
Sbjct: 608 MELSDRDSASYVLMSNIY 625
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 212/474 (44%), Gaps = 37/474 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y + G A+ +FD + ++ SW +M+ Y ++G L++F DM GV N+
Sbjct: 255 IDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNE 314
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ VL + +G+ +QLH +K ++ + ++L+ YG+ ++ + M +
Sbjct: 315 FALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNK 371
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I+N + VSW + G G++A+ + +M E P + F++ L +C+ ++S +G
Sbjct: 372 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 431
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
MQ H + +K+ + + +L MY KCG++ AR D ++ SW S++ G+A
Sbjct: 432 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 491
Query: 324 GRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
G +A E+F++M + ++ +L G S + +E F LM IDQ +
Sbjct: 492 GDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM------IDQYSF 545
Query: 380 GLILNVCAGLSEIKMGK-----EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ A + ++ +G+ E I+ + + + LL + NL ++
Sbjct: 546 TPAPSHYACMIDM-LGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAA 604
Query: 435 YQMSQRRDKVSWNAVLTG--YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
++ + D+ S + VL YA G+ E+A M ET + A S
Sbjct: 605 DRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMD----------ETGVKKDAGCSW 654
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
+E ++H F R+ N +Y L ++ F E DV IC
Sbjct: 655 IEINNEVHTFASRDMSHPNS------DSIYQMLGELVAVMQDFDELEPFDVHIC 702
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/669 (29%), Positives = 326/669 (48%), Gaps = 56/669 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPP---VFLLNRAIECYGKCGNLD 94
+P +Y L L L +S + + +AR L F P F LNR + Y + G L
Sbjct: 31 DPATYRLNLLLHSLISSGR-LAQARAL------FDQMPHRNNAFSLNRMLSGYSRSGQLS 83
Query: 95 DARGLFDEMPE--RDGGSWNAMLGAYTQNGFPGR----TLELFLDMNHSGVSANQITYAN 148
A LF P RD +W M+GA+ PG + LF DM GV+ +++T A
Sbjct: 84 AAHHLFLSSPPHLRDAVTWTVMIGAFASA--PGARASDAVSLFRDMLREGVAPDRVTVAT 141
Query: 149 VLR---SSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDI 204
VL +S + LH +K G NV++ ++L+DAY K ++ ARR+F ++
Sbjct: 142 VLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEM 201
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
++++V++N ++ G+ EA+ +F M R+ + FTF+ L + + G
Sbjct: 202 PHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGR 261
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+HG++ + + V SL + Y KC L+
Sbjct: 262 QVHGLVARAT-SSNVFVNNSLLDFYSKCDCLD---------------------------- 292
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
E ++LF+EM ER+ +S+N M+AGY + L M+ + D + +L+
Sbjct: 293 ---EMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLS 349
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
V + I +GK++H + SS V NAL+DMY KCG L +A+ F + + V
Sbjct: 350 VAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTG-V 408
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SW A++TG + GQ EEA+ F M+ P + TF + + A +N++ + G+Q+H ++
Sbjct: 409 SWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYL 468
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
IR+ + +V AL+++YTKC CL+ A++ F E + I N++I + H + + A+
Sbjct: 469 IRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAI 528
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++F M G KPD +TF +L AC H G + +++F+ M +YGI P EHY C+I
Sbjct: 529 KMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDT 588
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G ++++ + MPF + I CR +G L AA +L + +
Sbjct: 589 LGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPY 648
Query: 684 KITTNRFDR 692
I +N F +
Sbjct: 649 VILSNIFAK 657
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 151/312 (48%), Gaps = 14/312 (4%)
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIRE 328
++K F+ L L + GRL AR L DQ P N S ++SGY+ SG++
Sbjct: 25 MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84
Query: 329 ARELFNEMPE--RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD---IDQVTLGLIL 383
A LF P R+ ++W M+ + S A D V L R ++ D+VT+ +L
Sbjct: 85 AHHLFLSSPPHLRDAVTWTVMIGAFA-SAPGARASDAVSLFRDMLREGVAPDRVTVATVL 143
Query: 384 NV---CAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
N+ G + + +H F + SN+ V N LLD Y K G L +AR F +M
Sbjct: 144 NLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPH 203
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD V++NA++ G ++ G EA+ F+ M+ + ++FTF T+L + L G+Q
Sbjct: 204 -RDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQ 262
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H V R NV +L++ Y+KC CL+ ++F E D + N MI G+ N
Sbjct: 263 VHGLVARATSS-NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRC 321
Query: 559 GREALEVFGLMK 570
L +F M+
Sbjct: 322 ASIVLRLFREMQ 333
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 160/333 (48%), Gaps = 13/333 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA L + S I +++ + LV + + N I+ Y KCG LD A+ F
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ G SW AM+ QNG L+LF M +G+S ++ T+++ +++S+ +G+ +Q
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH +++ G +V S+L+D Y KC + +A + FD++ +N++SWN ++ Y G
Sbjct: 464 LHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQ 523
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-----IKIDFEGDD 279
K A+ MF ML +P + TF + L ACS E M+ ++ I E
Sbjct: 524 AKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYS 583
Query: 280 VVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGR---IREARELFNE 335
V+ +L + GR + + +L + P E + I W+SI+ G R A E
Sbjct: 584 CVIDTLG----RVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFS 639
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
M + + + + ++ W++A +MR
Sbjct: 640 MGSTDATPYVILSNIFAKAGKWEDAAGVKKIMR 672
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/687 (27%), Positives = 327/687 (47%), Gaps = 98/687 (14%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S A+ +AR+L L+T P V N + Y K G L DA LF MP RD SWN
Sbjct: 51 SCGALPDARRL---LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNT 107
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQLHGLIVKR 172
++ Y Q+ +LE F+ M+ SG S+ N T+A ++S E ++ QL G++ K
Sbjct: 108 LMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKF 167
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMF------------------------------- 201
G + + ++LVD + +C + A R+F
Sbjct: 168 GSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELF 227
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + ++ VSWN++V +G +EA+ M M + +R + T+ ++L AC+ LSS
Sbjct: 228 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 287
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H +I+ D V +L E+Y KCG
Sbjct: 288 WGKQLHAQVIRNLPCIDPYVASALVELYAKCGCF-------------------------- 321
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+EA+ +FN + +RN ++W ++AG+ + + E+++ MR +DQ L
Sbjct: 322 -----KEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALAT 376
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
+++ C ++ +G+++H ++ + VSN+L+ MY KC NL+SA F M+++
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKD 436
Query: 441 -----------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEM-- 469
++ ++WNA+L Y + G E+ + ++ M
Sbjct: 437 IVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLS 496
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ + RP T+ TL CA++ + + G QI ++ ++ A++ +Y+KC +
Sbjct: 497 EKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRIL 556
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A +VF + D++ N+MI G+ + G++A+E+F + K G KPD+I++ +L C
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V+ +FD M+ + I P LEH+ CM+ L R G++ E +D ++ MP PT +
Sbjct: 617 HSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVW 676
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELN 676
+ C+ +G L E AA+ + EL+
Sbjct: 677 GALLSACKIHGNNELAELAAKHVFELD 703
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 254/529 (48%), Gaps = 39/529 (7%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR-MFDD 203
+A+ LRS L ++ LHG +V G V L+++L+ AY C + DARR + D
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI----------------------- 240
I + N ++ NV++ Y+ G +AV +F +M D+
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 241 ---------RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
P FTFA A+ +C L +Q+ G++ K + D V +L +M+V+
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG ++ A L + E I S++ GY + + A ELF+ MPER+V+SWN M++
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++S +EALD V M+ +D T L CA LS ++ GK++H + RN +
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
+V++AL+++Y KCG + A+ F + R+ V+W ++ G+ + G E++ F++M+
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSL-HDRNNVAWTVLIAGFLQHGCFTESVELFNQMRA 364
Query: 472 ETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E +F TL++ C + L G+Q+H +++ VV +L+ +Y KC L+
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A +F+ + D++ SMI +A E F M + + IT++ +L A I
Sbjct: 425 AESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNV----ITWNAMLGAYIQ 480
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
G + L+ ++ M + + P Y + K G K + + R
Sbjct: 481 HGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 209/456 (45%), Gaps = 70/456 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + +E Y KCG +A+G+F+
Sbjct: 271 TTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNS 330
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ +W ++ + Q+G ++ELF M ++ +Q A ++ ++L +
Sbjct: 331 LHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKC-----------------------MV------ 193
+QLH L +K G V++ +SL+ Y KC M+
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQV 450
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANA 250
+ AR FD + KN ++WN ++ Y+ G ++ + M+ ML E D+RP T+
Sbjct: 451 GNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTL 510
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ L + G QI G +K+ D V ++ MY KCGR+ +AR + D + ++I
Sbjct: 511 FKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDI 570
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A E+F+++ +R + IS+ A+L+G + S L +E + +
Sbjct: 571 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDM 630
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M++ + N+ GL + ++D+ + G+
Sbjct: 631 MKR------------VHNISPGLEHF----------------------SCMVDLLGRAGH 656
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
L A+ +M + W A+L+ G +E A
Sbjct: 657 LTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELA 692
>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 774
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/649 (27%), Positives = 313/649 (48%), Gaps = 47/649 (7%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+L +A +FD MPERD SWN M+ + GF + L ++ M G ++ T A+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-ARRMFDDIQNK 207
VL + ++ L+ + HG+ VK G N+ + ++L+ Y KC + D R+F+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF------ACSFLSSPY 261
N VS+ ++ EAV MF M + ++ + +N L C LS Y
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 262 E---GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QIH + +++ F GD + SL E+Y K + A + + E N++SW ++
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 319 GYAI-----------------------------------SGRIREARELFNEMPERNVIS 343
G+ SG + R +F+ +P+ +V +
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA 383
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAML+GY+ ++EA+ M+ D+ TL +IL+ CA L ++ GK++HG +
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R + S N + + L+ +Y +C + + F D WN++++G+ +A+
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 464 TSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F M P++ +F T+L++C+ + SL G+Q H V+++ Y + AL ++
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++ A + F + +I N MI G+ HN RG EA+ ++ M G KPD ITF
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V+ L+ SM+ +GI P+L+HY C++ R G +++ E P
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATP 683
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + + + CR +G +L A +L L+P + + + +N +
Sbjct: 684 YKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 196/409 (47%), Gaps = 18/409 (4%)
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G IHG I+++ + D + L ++Y++CG + AR + D+ R++ SW + ++
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
G + EA E+F+ MPER+V+SWN M++ R ++AL M + TL +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C+ + + G HG + NIFV NALL MY KCG + + ++ + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA------ACANISSL-- 493
+VS+ AV+ G AR + EA+ F M + + +L+ C ++S +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 494 -EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E GKQIHC +R + ++ +L+E+Y K + A +F E ++V+ N MI+G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F R +++E M+ G +P+ +T +L AC G+V+ + F S+ P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QP 379
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFN---PTVPMLRKIFDKCRK 658
+ + M+ Y Y + +E +M F P L I C +
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 428
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 220/474 (46%), Gaps = 55/474 (11%)
Query: 77 VFLLNRAIECYGKCGNLDD-ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+F+ N + Y KCG + D +F+ + + + S+ A++G + +++F M
Sbjct: 173 IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 136 HSGVSANQITYANVLRSSA--------EEL---ELGVSKQLHGLIVKRGFCGNVILESSL 184
GV + + +N+L SA E+ ELG KQ+H L ++ GF G++ L +SL
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG--KQIHCLALRLGFGGDLHLNNSL 290
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++ Y K M A +F ++ N VSWN+++ + ++V +M +P
Sbjct: 291 LEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNE 350
Query: 245 FTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLG-------------------- 283
T + L AC F S E G +I I + + +L
Sbjct: 351 VTCISVLGAC-FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 284 --------SLTEMYVKCGR---LEDARGLLDQPDERNIISWTSIVSG----YAISGRIRE 328
+L+ + C R LE + + I + IVSG Y+ ++
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 329 ARELFNE-MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVC 386
+ +F++ + E ++ WN+M++G+ ++L +AL M +T ++ + +L+ C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ L + G++ HG + ++ Y S+ FV AL DMY KCG + SAR F+ R++ V W
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR-QFFDAVLRKNTVIW 588
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
N ++ GY G+ +EA+ + +M +P TF ++L AC++ +E G +I
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 224/515 (43%), Gaps = 124/515 (24%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ- 205
A++LR +E K +HG IV+ G + L + L+D Y +C AR++FD++
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 206 ------------------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
++ VSWN ++ + G ++A+V++ +M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ + P FT A+ L ACS + GM+ HGV +K + + V +L MY KCG +
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 296 EDARGL-----LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
D G+ L QP+E +S+T+++ G A ++ EA ++F M E+ V
Sbjct: 190 VD-YGVRVFESLSQPNE---VSYTAVIGGLARENKVLEAVQMFRLMCEKGV--------- 236
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV------CAGLSEI---KMGKEVHGF 401
+D V L IL++ C LSEI ++GK++H
Sbjct: 237 ----------------------QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCL 274
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
R + ++ ++N+LL++Y K ++ A + F +M + + VSWN ++ G+ + +S++
Sbjct: 275 ALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE-VNVVSWNIMIVGFGQEYRSDK 333
Query: 462 AMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
++ + M+ +P++ T ++L AC +E G+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR----------------------- 370
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
R+F V N+M+ G+ + E EA+ F M+ + +KPD T
Sbjct: 371 ------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
IL +C L+F + + +G++ + E
Sbjct: 419 LSVILSSCAR-------LRFLEGGKQIHGVVIRTE 446
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + C+ +++ R+ +V F+ + Y KCG +D AR FD +
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVL 581
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELGVS 162
++ WN M+ Y NG + L+ M SG + IT+ +VL + + +E G+
Sbjct: 582 RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLE 641
Query: 163 -----KQLHGL--IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNV 214
+++HG+ + C +VD G+ + DA ++ + K ++V W +
Sbjct: 642 ILSSMQRIHGIEPELDHYIC--------IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEI 693
Query: 215 IVRRYLVAGNGKEAVVMFFKMLRED 239
++ V G+ A + K++R D
Sbjct: 694 LLSSCRVHGDVSLARRVAEKLMRLD 718
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/534 (33%), Positives = 270/534 (50%), Gaps = 45/534 (8%)
Query: 162 SKQLHGL---IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
SKQ+H + I+ GF N + LV MT AR++FD I + N WN + R
Sbjct: 51 SKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRG 110
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y + + +E V +FF+M DIRP FTF L +C +++ EG Q+H +IK F G+
Sbjct: 111 YAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 170
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L +MY G + DA + + ERN+++WTS+++GY +S + AR LF+ PE
Sbjct: 171 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPE 230
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+V+ WN M++GY G ++ K
Sbjct: 231 RDVVLWNIMVSGYIE----------------------------------GGDMVEARKLF 256
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H +R+ + N +L Y GN+ + F +M +R + SWNA++ GYA G
Sbjct: 257 HEMPNRD-----VMFWNTVLKGYATNGNVEALEGLFEEMPER-NIFSWNALIGGYAHNGL 310
Query: 459 SEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E + SF M E+ P+ T T+L+ACA + +L+ GK +H + + + NV
Sbjct: 311 FFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGN 370
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+++Y KC +E AI VF+ + D+I N++I G + RG +AL +F MK G KP
Sbjct: 371 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 430
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D ITF GIL AC H G V+ +F SM Y I+PQ+EHY CM+ + R G +++ F
Sbjct: 431 DGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAF 490
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V +MP + + CR L E A +RL EL P P + + +N +
Sbjct: 491 VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIY 544
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 233/497 (46%), Gaps = 55/497 (11%)
Query: 9 LKNILSKSSPKP--TPSKTLTKTISGHLKSDEP--VSYSLYAHLFQLCASSKAI--VEAR 62
++N L K KP P T +L P + + L Q C +SK + ++A+
Sbjct: 1 MENFLLKKDIKPFDPPGGKSCSTEIDYLAPKPPHRLLEERFISLLQSCKTSKQVHQIQAQ 60
Query: 63 KLESNL-VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
+ + Y TP + + ++ + AR LFD++P+ + WN+M Y Q+
Sbjct: 61 IIANGFQYNEYITPKLVTICATLK------RMTYARQLFDQIPDPNIALWNSMFRGYAQS 114
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
+ LF M + N T+ VL+S + L +Q+H ++K GF GN +
Sbjct: 115 ESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVG 174
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++L+D Y + DA ++F ++ +N V+W ++ Y+++ + A +F D+
Sbjct: 175 TTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF------DLA 228
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P E D V+ + Y++ G + +AR L
Sbjct: 229 P---------------------------------ERDVVLWNIMVSGYIEGGDMVEARKL 255
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
+ R+++ W +++ GYA +G + LF EMPERN+ SWNA++ GY + L+ E L
Sbjct: 256 FHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 315
Query: 362 -DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
F ++ ++ + TL +L+ CA L + +GK VH + + N++V NAL+DM
Sbjct: 316 GSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDM 375
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFT 479
Y KCG + +A F M +D +SWN ++ G A + +A+ F +M+ +P T
Sbjct: 376 YAKCGIIENAISVFRGMDT-KDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 434
Query: 480 FETLLAACANISSLEQG 496
F +L AC ++ +E G
Sbjct: 435 FIGILCACTHMGLVEDG 451
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P + E ++ + + +Q QI +I N ++ N LV + + YA ++
Sbjct: 33 PHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQL 92
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
F + ++ + NSM G+ +E RE + +F MK I+P+ TF +L +C
Sbjct: 93 FDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSC 146
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 274/536 (51%), Gaps = 36/536 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T A+++++ A EL KQLH ++++ G N L + ++ Y KC + ++FD +
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+N VSW I+ + +EA+ F +M E F ++ L AC+ L + G
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+H +++K F + V +LT+MY KCG L DA
Sbjct: 197 QVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDAC------------------------- 231
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD--IDQVTLGLI 382
+ F EMP ++ + W +M+ G+ ++ +K+AL M+ T D IDQ L
Sbjct: 232 ------KAFEEMPCKDAVLWTSMIDGFVKNGDFKKAL--TAYMKMVTDDVFIDQHVLCST 283
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C+ L GK +H I + + F+ NAL DMY K G++ SA F S
Sbjct: 284 LSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCIS 343
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
VS A++ GY Q E+A+++F +++ P++FTF +L+ ACAN + LE G Q+H
Sbjct: 344 IVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHG 403
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
V++ ++ + LV++Y KC +++I++F E + D I N+++ F + GR
Sbjct: 404 QVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRN 463
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+E F M G+KP+ +TF +L C H G V+ L +F SM YG++P+ EHY C+I
Sbjct: 464 AIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVI 523
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G +KE EDF+N MPF P V C+ +G ++AA +L +L P
Sbjct: 524 DLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEP 579
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 226/468 (48%), Gaps = 38/468 (8%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
SGH SD AHL Q A +K + + ++L + L+ P FL N + Y KC
Sbjct: 68 SGHKLSDTKT----VAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKC 123
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G LD LFD+M +R+ SW +++ + N L F M G A Q ++VL
Sbjct: 124 GELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVL 183
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ + Q+H L+VK GF + + S+L D Y KC ++DA + F+++ K+AV
Sbjct: 184 QACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAV 243
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
W ++ ++ G+ K+A+ + KM+ +D+ + L ACS L + G +H I
Sbjct: 244 LWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATI 303
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREA 329
+K+ FE + + +LT+MY K G + A + D +I+S T+I+ GY +I +A
Sbjct: 304 LKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKA 363
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
F ++ R + + ++ T ++ CA
Sbjct: 364 LSTFVDLRRRGI-------------------------------EPNEFTFTSLIKACANQ 392
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++++ G ++HG + + ++ + FVS+ L+DMY KCG L I + + D+++WN +
Sbjct: 393 AKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCG-LFDHSIQLFDEIENPDEIAWNTL 451
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +++ G A+ +F+ M +P+ TF LL C++ +E G
Sbjct: 452 VGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG 499
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 2/215 (0%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D T+ ++ A E+ GK++H + R N F+SN L++Y KCG L F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSL 493
+MSQ R+ VSW +++TG+A + +EA++SF +M+ E ++F ++L AC ++ ++
Sbjct: 134 DKMSQ-RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ G Q+HC V++ + + L ++Y+KC L A + F+E D ++ SMI GF
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N ++AL + M + + D L AC
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSAC 287
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 169/364 (46%), Gaps = 33/364 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE-RDGGS 110
C++ KA + L + ++ F+ N + Y K G++ A +F + S
Sbjct: 287 CSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVS 346
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
A++ Y + + L F+D+ G+ N+ T+ +++++ A + +L QLHG +V
Sbjct: 347 LTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVV 406
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
K F + + S+LVD YGKC + + ++FD+I+N + ++WN +V + G G+ A+
Sbjct: 407 KFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIE 466
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVLG 283
F M+ ++P TF N L CS +G+ +I+GV+ K +
Sbjct: 467 TFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEH------YS 520
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREAR----ELFNEMPE 338
+ ++ + G+L++A ++ P E N+ W S + I G + A+ +L PE
Sbjct: 521 CVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPE 580
Query: 339 RNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + +L+ Y + W++ V +RK KD + +N G S + + +
Sbjct: 581 NS--GAHVLLSNIYAKEKQWED----VQSLRKMIKDGN-------MNKLPGYSWVDIRNK 627
Query: 398 VHGF 401
H F
Sbjct: 628 THVF 631
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/587 (30%), Positives = 301/587 (51%), Gaps = 43/587 (7%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
S N +L Y G L+ F+DM S + +Q+T+ VL ++ L + +Q+H +
Sbjct: 289 SRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMA 348
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K G + + +SL++ Y K + AR +F+++ ++ +SWN ++ + EAV
Sbjct: 349 LKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAV 408
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM----QIHGVIIKIDFEGDDVVLGSL 285
+F ++LR ++P ++T + L A S L EG+ QIH IK + D V
Sbjct: 409 CLFMQLLRCGLKPDHYTMTSVLKAASSLP---EGLSLSKQIHVHAIKTNNVADSFV---- 461
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
T+++ Y+ + ++EA LF ++++WN
Sbjct: 462 ---------------------------STALIDAYSRNRCMKEAEVLFGR-NNFDLVAWN 493
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AM++GYT+S + L+ LM K + D TL +L C L I GK+VH + ++
Sbjct: 494 AMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS 553
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y +++VS+ +LDMY KCG++ +A+ F + D V+W +++G G+ E A+
Sbjct: 554 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTLISGCIENGEEERALHV 612
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYT 523
FS+M+ P +FT TL A + +++LEQG+QIH ++ NC V +LV++Y
Sbjct: 613 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV-GTSLVDMYA 671
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC ++ A +FK +++ N+M++G + G+EAL++F M+ GIKPD +TF G
Sbjct: 672 KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIG 731
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V A ++ SM YGI P++EHY C+ R G +KE E+ ++ M
Sbjct: 732 VLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSME 791
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ M R + CR G G+ A +L EL P + + +N +
Sbjct: 792 ASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 838
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/573 (25%), Positives = 261/573 (45%), Gaps = 47/573 (8%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S+ ++ + + ++ P FL+N I Y KCG+L AR +FD+MPERD SWN+
Sbjct: 58 STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117
Query: 114 MLGAYTQN--GFPGRTLELFL---DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+L AY Q+ G E FL + V +++T + +L+ + S+ HG
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGY 177
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
K G G+ + +LV+ Y K + + R +F+++ ++ V WN++++ YL G +EA
Sbjct: 178 ACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 237
Query: 229 VVMFFKMLREDIRPLNFT-------------------FANALFACS---------FLSSP 260
+ + + P T F N A + LS
Sbjct: 238 IDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGY 297
Query: 261 YEGMQIHGVI------IKIDFEGDDVVLGSLTEMYVKCGRLEDARGL----LDQPDERNI 310
Q ++ ++ D E D V + V+ L + + L + +
Sbjct: 298 LHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLML 357
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
S+++ Y +I AR +FN M ER++ISWN+++AG +S L EA+ + +
Sbjct: 358 TVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRC 417
Query: 371 TKDIDQVTLGLILNVCAGLSE-IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
D T+ +L + L E + + K++H + + ++ FVS AL+D Y + ++
Sbjct: 418 GLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKE 477
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A + F + D V+WNA+++GY + + + F+ M + R FT T+L C
Sbjct: 478 AEVLFGR--NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCG 535
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ ++ QGKQ+H + I++ Y++++ ++++Y KC + A F D + +
Sbjct: 536 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 595
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
+I G N AL VF M+ G+ PD T
Sbjct: 596 LISGCIENGEEERALHVFSQMRLMGVLPDEFTI 628
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 205/411 (49%), Gaps = 35/411 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K + AR +F+ M ERD SWN+++ Q+ + LF+ + G+
Sbjct: 361 NSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLK 420
Query: 141 ANQITYANVLRSSAEELE-LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ T +VL++++ E L +SKQ+H +K + + ++L+DAY + M +A
Sbjct: 421 PDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEV 480
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F N + V+WN ++ Y + +G + + +F M ++ R +FT A L C FL +
Sbjct: 481 LFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFA 539
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G Q+H IK ++ D V + +MYVKCG + A+ D + ++WT+++SG
Sbjct: 540 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISG 599
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+G A +F++M V+ D+ T+
Sbjct: 600 CIENGEEERALHVFSQMRLMGVLP-------------------------------DEFTI 628
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+ + L+ ++ G+++H + + +S+ FV +L+DMY KCG++ A F ++ +
Sbjct: 629 ATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRI-E 687
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN 489
+ +WNA+L G A+ G+ +EA+ F +M+ +P K TF +L+AC++
Sbjct: 688 MMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH 738
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 228/485 (47%), Gaps = 49/485 (10%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
LR + +L + K H I+ L ++L+ Y KC +T ARR+FD + ++
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 210 VSWNVIVRRYL-----VAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEG 263
VSWN I+ Y V N KEA ++F ++LR+D+ + T + L C
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVCAS 171
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
HG KI +GDD V G+L +Y+K G++++ R L ++ R+++ W ++ Y
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEM 231
Query: 324 GRIREARELF----------NEMPER----------------------------NVISWN 345
G EA +L NE+ R +IS N
Sbjct: 232 GFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRN 291
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+L+GY + + L M ++ + DQVT L+L L + +G++VH +
Sbjct: 292 KILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKL 351
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ VSN+L++MY K + AR F MS+ RD +SWN+V+ G A+ EA+
Sbjct: 352 GLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE-RDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 466 FSE-MQWETRPSKFTFETLLAACANI-SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F + ++ +P +T ++L A +++ L KQIH I+ + AL++ Y+
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
+ C++ A +F ++ D++ N+M+ G+ + G + LE+F LM K+G + D T
Sbjct: 471 RNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529
Query: 584 ILLAC 588
+L C
Sbjct: 530 VLKTC 534
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 166/336 (49%), Gaps = 5/336 (1%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y++ + L + + + ++++ + + F+ I+ Y + + +A
Sbjct: 420 KPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAE 479
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LF D +WNAM+ YTQ+ +TLELF M+ G ++ T A VL++
Sbjct: 480 VLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLF 538
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ KQ+H +K G+ ++ + S ++D Y KC M+ A+ FD I + V+W ++
Sbjct: 539 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLIS 598
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G + A+ +F +M + P FT A A S L++ +G QIH +K++
Sbjct: 599 GCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTS 658
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL +MY KCG ++DA L + + NI +W +++ G A G +EA +LF +M
Sbjct: 659 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQME 718
Query: 338 ERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ +++ +L+ + S L EA ++ M +
Sbjct: 719 SLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHR 754
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 43/341 (12%)
Query: 293 GRLEDARGL-LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
G+ AR L L++ ER +++ +++S Y+ G + AR +F++MPER+++SWN++LA Y
Sbjct: 65 GKCTHARILALEENPERFLVN--NLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAY 122
Query: 352 TRSLLW-----KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+S KEA ++R+ ++TL +L +C + + HG+ +
Sbjct: 123 AQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIG 182
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ FV+ AL+++Y K G ++ R+ F +M RD V WN +L Y G EEA+
Sbjct: 183 LDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPY-RDVVLWNLMLKAYLEMGFKEEAIDLS 241
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
S P++ T L + S + Q+ F N
Sbjct: 242 SAFHTSGLHPNEITLRLLSRISGDDS---EAGQVKSFENGN------------------- 279
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
S+ ++I N ++ G+ H + L+ F M + ++ D +TF +L
Sbjct: 280 ----------DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVL 329
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
+ ++ L Q M K G+ L +I +YC+
Sbjct: 330 ATAVRLDSLALGQQVH-CMALKLGLDLMLTVSNSLINMYCK 369
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 4/218 (1%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
A+ + R++ +N + T F+ ++ Y KCG++DDA LF + + +WNAML
Sbjct: 640 ALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 699
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHGLIVKRGFC 175
Q+G L+LF M G+ +++T+ VL + S L K + + G
Sbjct: 700 GLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIK 759
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNVIVRRYLVAGNGKEAVVMFFK 234
+ S L DA G+ ++ +A + D + + + S + ++ V G+ + + K
Sbjct: 760 PEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATK 819
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
+L ++ PL+ + L +S ++ M++ ++K
Sbjct: 820 LL--ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMK 855
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 474 RPSKFTFETLLAAC--ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
R + T + +L C A I +LE+ + F++ N L+ +Y+KC L YA
Sbjct: 54 RDAISTSDLMLGKCTHARILALEENPER--FLVNN-----------LISMYSKCGSLTYA 100
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERG-----REALEVFGLMKKEGIKPDHITFHGILL 586
RVF + D++ NS++ + + G +EA +F +++++ + +T +L
Sbjct: 101 RRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLK 160
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
C+H G V A + F CK G+ ++ +Y ++G +KE MP+ V
Sbjct: 161 LCLHSGYV-CASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVV 219
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 195/713 (27%), Positives = 326/713 (45%), Gaps = 103/713 (14%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPV--FLLNRAIECYGKCGNLD 94
D + +Y L Q C +A+ +++ ++ + ++ + + Y KC +
Sbjct: 73 DITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESE 132
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
A LF ++ ++ SW A++G ++ GF L F +M+ G+ + ++S
Sbjct: 133 IANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASG 192
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+G K +H +VK G G + + +SL+D YGKC + +A+++FD I KN V+WN
Sbjct: 193 ALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNS 252
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ + G EAV F++M E + P T ++ L A + LS EG Q H + +
Sbjct: 253 MIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSG 312
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E +++ SL Y K G +ED A +F+
Sbjct: 313 LELTNILGSSLINFYSKVGLVED-------------------------------AELVFS 341
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
EM E++ ++WN +++GY + L ALD +M+ D VTL I+ A +K+
Sbjct: 342 EMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKL 401
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR------------IW--------- 433
GKE H F RN+ S++ V+++++DMY KC L AR +W
Sbjct: 402 GKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAE 461
Query: 434 ----------FYQMSQR---RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ---------- 470
FYQM + +SWN+V+ G +G+ ++A +F EMQ
Sbjct: 462 QGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLIT 521
Query: 471 WET--------------------------RPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W T +P+ + +LL+AC+ ++SL G+ IHC++
Sbjct: 522 WTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYIT 581
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R+ ++ +LV +Y KC + A RVF ++ + N+MI G+ + + EAL
Sbjct: 582 RHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALS 641
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+F +K+E IKPD ITF IL AC H G V+ L+ F M + I+ Q EHY C++ +
Sbjct: 642 LFRRLKEECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSIL 701
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R + E + MPF P + + CR++ L E RL +L P
Sbjct: 702 SRSHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEP 754
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 237/505 (46%), Gaps = 36/505 (7%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGN 177
+ G L+L D+ ++ Y +L+ E L + +Q+HG I+K G N
Sbjct: 55 KQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKN 114
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+E+ LV Y KC A R+F +Q +N SW I+ G +EA++ F +M
Sbjct: 115 EYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHE 174
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+ NF A A L G +H ++K+ G V SL +MY KCG E+
Sbjct: 175 YGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEE 234
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
A+ + D+ E+NI++W S++ + +G EA E F EM V
Sbjct: 235 AKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAP-------------- 280
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
QVTL L+ A LS I GK+ H + + ++L
Sbjct: 281 -----------------TQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSL 323
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
++ Y K G + A + F +M + +D V+WN +++GY G + A+ MQ E R
Sbjct: 324 INFYSKVGLVEDAELVFSEMLE-KDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFD 382
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T +++AA A+ +L+ GK+ H F +RN E +V +++++Y KC LE A RVF
Sbjct: 383 SVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFD 442
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
++ D+I+ N+++ + E L++F M+ EG+ P+ I+++ ++L +++G V
Sbjct: 443 ATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQ 502
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMI 621
A F M+ GI P L + +I
Sbjct: 503 AKDTFMEMQ-SLGICPNLITWTTLI 526
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 15/296 (5%)
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIFVSNA 416
EALD V + I G +L C + +G+++HG I +N S N ++
Sbjct: 61 EALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETK 120
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
L+ Y KC A F ++ Q +++ SW A++ +R G ++EA+ F EM ++
Sbjct: 121 LVIFYSKCDESEIANRLFGKL-QVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLL 179
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
F A + + GK +H +V++ + +L+++Y KC E A +VF
Sbjct: 180 DNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVF 239
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIH 590
+ +++ NSMI+ F N EA+E F M+ EG+ P +T L L+ I
Sbjct: 240 DKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVID 299
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
EG AL + + L I Y + G +++ E + M TV
Sbjct: 300 EGKQGHALAVLSGLELTNILGSSL------INFYSKVGLVEDAELVFSEMLEKDTV 349
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 30/341 (8%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPE----RDGGSWNAMLGAYTQNGFPGRTLEL 130
P V N I G +D A+ F EM + +W ++ QNG
Sbjct: 482 PNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLT 541
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M +G+ N ++ +++L + + L + +H I + + + SLV+ Y K
Sbjct: 542 FQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAK 601
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + A+R+FD I K +N ++ Y + G EA+ +F ++ E I+P TF +
Sbjct: 602 CGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSI 661
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL------GSLTEMYVKCGRLEDA-RGLLD 303
L AC EG+++ ID + ++ G L + + L++A R +L
Sbjct: 662 LSACGHAGLVREGLELF-----IDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILG 716
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFN---EMPERNVISWNAMLAGYTRSLLWKEA 360
P E + + S+++ LF ++ N ++ A+ Y + +W EA
Sbjct: 717 MPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEA 776
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
LM++ + L+ G S I++G + H F
Sbjct: 777 SKVRGLMKERS-----------LSKIPGHSLIQIGNKTHVF 806
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/597 (28%), Positives = 291/597 (48%), Gaps = 33/597 (5%)
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
+ I + K ++ +A +F+ + + ++ ML Y +N + + M V
Sbjct: 81 KLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMP 140
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +L+ S E L+L +++HG+++ GF N+ +++V+ Y KC + DA +MF
Sbjct: 141 VVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMF 200
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ + ++ VSWN +V Y G + AV + +M +P + T + L A + L +
Sbjct: 201 ERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALR 260
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G IHG + FE V ++ + Y KCG
Sbjct: 261 IGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS--------------------------- 293
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+R AR +F M RNV+SWN M+ GY ++ +EA M + V++
Sbjct: 294 ----VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMG 349
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
L+ CA L +++ G+ VH + ++ V N+L+ MY KC + A F + + +
Sbjct: 350 ALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNL-KHK 408
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIH 500
V+WNA++ GYA+ G EA+ F EMQ + +P FT +++ A A++S Q K IH
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
IR + NV AL++ + KC ++ A ++F VI N+MI G+ N GR
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EAL++F M+ +KP+ ITF ++ AC H G V+ + +F+SM+ YG+ P ++HY M
Sbjct: 529 EALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAM 588
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G + + F+ MP P + +L + CR + LGE A L +L+P
Sbjct: 589 VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDP 645
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 270/563 (47%), Gaps = 49/563 (8%)
Query: 34 LKSDE--PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
++ DE PV Y + +L QL + + R++ ++T +F + + Y KC
Sbjct: 133 MRCDEVMPVVYD-FTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCR 191
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++DA +F+ MP+RD SWN ++ Y QNGF R +++ L M +G + IT +VL
Sbjct: 192 QIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLP 251
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ A+ L + + +HG + GF V + ++++D Y KC + AR +F + ++N VS
Sbjct: 252 AVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVS 311
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y G +EA F KML E + P N + AL AC+ L G +H ++
Sbjct: 312 WNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLD 371
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ D V+ SL MY KC R++ A + + +++W +++ GYA +G + EA
Sbjct: 372 EKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALN 431
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF EM ++ D TL ++ A LS
Sbjct: 432 LFCEMQSHDI-------------------------------KPDSFTLVSVITALADLSV 460
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ K +HG R N+FV AL+D + KCG +++AR F + Q R ++WNA++
Sbjct: 461 TRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLF-DLMQERHVITWNAMID 519
Query: 452 GYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYE 509
GY G EA+ F+EMQ +P++ TF +++AAC++ +E+G + N E
Sbjct: 520 GYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLE 579
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE-----ALE 564
+ GA+V++ + L+ A + ++ I +LG C + E A E
Sbjct: 580 PTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADE 639
Query: 565 VFGLMKKEGIKPDHITFHGILLA 587
+F L PD +H +LLA
Sbjct: 640 LFDL------DPDDGGYH-VLLA 655
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 263/565 (46%), Gaps = 80/565 (14%)
Query: 153 SAEELELGVS-KQLHG---LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
SA LEL S K+LH LI+K GF + ++ L+ + K +T+A R+F+ +++K
Sbjct: 47 SAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V ++ +++ Y ++AV + +M +++ P+ + F L G +IHG
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
++I F+ + + ++ +Y KC ++EDA + ++ +R+++SW ++V+GYA +G R
Sbjct: 167 MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARR 226
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A ++ V M++ + D +TL +L A
Sbjct: 227 AVQV-------------------------------VLQMQEAGQKPDSITLVSVLPAVAD 255
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L +++G+ +HG+ R + + V+ A+LD Y KCG++RSAR+ F MS R+ VSWN
Sbjct: 256 LKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSS-RNVVSWNT 314
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ GYA+ G+SEEA +F +M E P+ + L ACAN+ LE+G+ +H +
Sbjct: 315 MIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKK 374
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+V +L+ +Y+KC ++ A VF V+ N+MILG+ N EAL +F
Sbjct: 375 IGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFC 434
Query: 568 LMKKEGIKPDHITF-------------------HGILLACIHEGNV-------------- 594
M+ IKPD T HG+ + + + NV
Sbjct: 435 EMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCG 494
Query: 595 --KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM---PFNPTVPML 649
+ A + FD M+ ++ I + MI Y G+ +E D N M P
Sbjct: 495 AIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITF 549
Query: 650 RKIFDKCRKNGYATLGEWAARRLNE 674
+ C +G G + + E
Sbjct: 550 LSVIAACSHSGLVEEGMYYFESMKE 574
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 304/611 (49%), Gaps = 52/611 (8%)
Query: 69 VTFYPT--PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
+F P P + R + + + G + +A +F++M D WN ++ YT NG
Sbjct: 48 TSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQE 107
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
++ + M G+ ++ T+ V+++ E L L V +++HG ++K GF +V + + L+D
Sbjct: 108 AIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLID 167
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y K + A ++FD++ ++ VSWN +V Y + G+G +++ F +MLR + F
Sbjct: 168 MYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFG 227
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
+AL ACS GM+IH +I+ + E D +V SL +MY KC
Sbjct: 228 MISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKC-------------- 273
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
G++ A +FN + +N+++WNAM+ G
Sbjct: 274 -----------------GKVDYAERVFNRIYSKNIVAWNAMIGG---------------- 300
Query: 367 MRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M++ K I D +T+ +L C+ + GK +HGF R + + + AL+DMY KCG
Sbjct: 301 MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCG 360
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLL 484
L+ A F QM+++ + VSWN ++ Y + Q +EA+ F + E +P T ++L
Sbjct: 361 ELKLAEHVFNQMNEK-NMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVL 419
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
A A ++S +GKQIH ++++ N A+V +Y KC L+ A F DV+
Sbjct: 420 PAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVV 479
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+MI+ + + GR +++ F M+ +G KP+ TF +L AC G + FF+SM
Sbjct: 480 SWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSM 539
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
+ +YGI P +EHY CM+ L R G + E + F+ MP PT + + R + L
Sbjct: 540 KVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVL 599
Query: 665 GEWAARRLNEL 675
E AAR + L
Sbjct: 600 AELAARHILSL 610
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 228/453 (50%), Gaps = 48/453 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + C A++ +K+ L+ V++ N I+ Y K G ++ A +FDEMP
Sbjct: 127 FPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP 186
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SWN+M+ Y +G +L F +M G A++ + L + + E L +
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++ ++++++SL+D YGKC + A R+F+ I +KN V+WN ++ G
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI------GG 300
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E + + P T N L +CS + EG IHG I+ F V+ +
Sbjct: 301 MQE---------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETA 351
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG L+ A + +Q +E+N++SW ++V+ Y + + +EA ++F
Sbjct: 352 LVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQH--------- 402
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
++ + K D +T+ +L A L+ GK++H +I +
Sbjct: 403 ---------------------ILNEPLKP-DAITIASVLPAVAELASRSEGKQIHSYIMK 440
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
SN F+SNA++ MY KCG+L++AR +F M +D VSWN ++ YA G ++
Sbjct: 441 LGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVC-KDVVSWNTMIMAYAIHGFGRTSIQ 499
Query: 465 SFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
FSEM+ + +P+ TF +LL AC+ +++G
Sbjct: 500 FFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 185/404 (45%), Gaps = 28/404 (6%)
Query: 32 GHLKSDEPVSYSLYA--HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
G ++ D+ V + +L C+ S A++E + + + P + L ++ YGK
Sbjct: 299 GGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGK 358
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG L A +F++M E++ SWN M+ AY QN L++F + + + + IT A+V
Sbjct: 359 CGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASV 418
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L + AE KQ+H I+K G N + +++V Y KC + AR FD + K+
Sbjct: 419 LPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDV 478
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
VSWN ++ Y + G G+ ++ F +M + +P TF + L ACS EG
Sbjct: 479 VSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNS 538
Query: 270 IIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
+K+++ D + G + ++ + G L++A+ + E + T+ + G ++
Sbjct: 539 -MKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFI----EEMPLVPTARIWGSLLAASRN 593
Query: 328 EARELFNEMPERNVISWNAMLAG--------YTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+ E+ R+++S G Y + W++ +LM++
Sbjct: 594 HNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQ--------- 644
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
GL+ V G S + + FI+++ ++ + +LD+ K
Sbjct: 645 GLVKTV--GCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLK 686
>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 760
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/649 (27%), Positives = 311/649 (47%), Gaps = 47/649 (7%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+L++A +FD MPERD SWN M+ + GF + L+++ M G ++ T A+
Sbjct: 70 KVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLAS 129
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-ARRMFDDIQNK 207
VL + ++ + + + HG+ VK G N+ + ++L+ Y KC M D R+F+ +
Sbjct: 130 VLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEP 189
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF------ACSFLSSPY 261
N VS+ ++ EAV MF M + ++ +N L C LS Y
Sbjct: 190 NEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIY 249
Query: 262 E---GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QIH + ++ F G+ + SL E+Y K + A + + E N++SW +++
Sbjct: 250 GNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIA 309
Query: 319 GYAI-----------------------------------SGRIREARELFNEMPERNVIS 343
G+ SG + R +FN +P+ +V +
Sbjct: 310 GFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPSVSA 369
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAML+GY+ ++EA++ M+ D+ TL +IL+ CA L ++ GK++HG
Sbjct: 370 WNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAI 429
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R + S + + + L+ +Y +C + F D WN++++G R +A+
Sbjct: 430 RTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKAL 489
Query: 464 TSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F M + P++ T+ +L +C+ + SL G+Q H V+++ Y + A+ ++
Sbjct: 490 MLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDM 549
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC +E A + F S + +I N MI G+ HN RG EA++++ M G KPD ITF
Sbjct: 550 YCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITF 609
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V L+ SM+ +GI P+L+HY C++ R G +++ E P
Sbjct: 610 VSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATP 669
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + + + CR G +L A +L L+P + + +N +
Sbjct: 670 YKSSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLSNTY 718
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 186/400 (46%), Gaps = 18/400 (4%)
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ D + L ++Y++ G + AR L D+ R++ SW + ++ G + EA E
Sbjct: 20 RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F+ MPER+V+SWN M++ R ++ALD M + TL +L+ C+ + +
Sbjct: 80 VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+G HG + NIFV NALL MY KCG + + ++ ++VS+ V++
Sbjct: 140 GVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVIS 199
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA------ACANISSLEQ---GKQIHC 501
G AR + EA+ F M + + +L+ C ++S + GKQIH
Sbjct: 200 GLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHS 259
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+R + + +L+E+Y K + A +F E ++V+ N MI GF R +
Sbjct: 260 LALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDK 319
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
++E M+ G +P+ +T IL AC G+V+ + F+++ P + + M+
Sbjct: 320 SIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIP-----QPSVSAWNAML 374
Query: 622 KLYCRYGYMKELEDFVNRMPFN---PTVPMLRKIFDKCRK 658
Y Y + +E + +M F P L I C +
Sbjct: 375 SGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCAR 414
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 223/479 (46%), Gaps = 65/479 (13%)
Query: 77 VFLLNRAIECYGKCGNLDD-ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+F+ N + Y KCG + D +F+ + E + S+ ++ + + +F M
Sbjct: 159 IFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMC 218
Query: 136 HSGVSANQITYANVLR--------SSAEELELGV-SKQLHGLIVKRGFCGNVILESSLVD 186
GV + + +N+L S E+ V KQ+H L ++RGF G + L +SL++
Sbjct: 219 EKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLE 278
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE----AVVMFFKMLRED-IR 241
Y K M A +F ++ N VSWN+ ++AG G+E + + K +R+
Sbjct: 279 IYAKNKDMNGAELIFTEMPEVNVVSWNI-----MIAGFGQEYRSDKSIEYLKRMRDSGFE 333
Query: 242 PLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLG----------------- 283
P T + L AC F S E G +I I + + +L
Sbjct: 334 PNEVTCISILGAC-FRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQ 392
Query: 284 -----------SLTEMYVKCGRLEDARG---------LLDQPDERNIISWTSIVSGYAIS 323
+L+ + C RL G + ++ +I+S +++ Y+
Sbjct: 393 MQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVS--GLIAVYSEC 450
Query: 324 GRIREARELFNE-MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGL 381
++ +F++ + E ++ WN+M++G R+ L +AL M +T+ + ++ T +
Sbjct: 451 EKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAI 510
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L C+ L + G++ HG + ++ Y S+ FV A+ DMY KCG + SAR +F +S R+
Sbjct: 511 VLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVS-RK 569
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ V WN ++ GYA G+ +EA+ + EM +P TF ++L AC++ ++ G +I
Sbjct: 570 NTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEI 628
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 9/295 (3%)
Query: 84 IECYGKC---GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
I G C G+++ R +F+ +P+ +WNAML Y+ + F M +
Sbjct: 340 ISILGACFRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLK 399
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ T + +L S A L KQ+HG+ ++ + + S L+ Y +C M +
Sbjct: 400 PDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECI 459
Query: 201 FDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLS 258
FDD N+ + WN ++ +A+++F +M + + P T+A L +CS L
Sbjct: 460 FDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLC 519
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S G Q HG ++K + D V ++T+MY KCG +E AR D +N + W ++
Sbjct: 520 SLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIH 579
Query: 319 GYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
GYA +GR EA +L+ EM + + I++ ++L + S L L+ + M++
Sbjct: 580 GYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQR 634
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 152/331 (45%), Gaps = 19/331 (5%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE-MPERDGGS 110
CA + + +++ + + +++ I Y +C ++ +FD+ + E D
Sbjct: 412 CARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIAC 471
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLI 169
WN+M+ +N + L LF M+ + V N+ TYA VL S + L +Q HG +
Sbjct: 472 WNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQV 531
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK G+ + +E+++ D Y KC + AR+ FD + KN V WN ++ Y G G EAV
Sbjct: 532 VKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEMIHGYAHNGRGDEAV 591
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVL 282
++ +M+ +P TF + L ACS G++I HG+ ++D
Sbjct: 592 DLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHGIEPELDH------Y 645
Query: 283 GSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREAR---ELFNEMPE 338
+ + + GRLEDA L + P + + + W ++S + G + AR E +
Sbjct: 646 ICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKLMHLDP 705
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+N ++ + Y+ W +A LM K
Sbjct: 706 QNSAAYVLLSNTYSSVRQWDDAAALQELMNK 736
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 83/185 (44%), Gaps = 4/185 (2%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ YA + C+ ++V R+ +V F+ + Y KCG ++ AR FD
Sbjct: 506 TTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDT 565
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELG 160
+ ++ WN M+ Y NG ++L+ +M +G + IT+ +VL + + ++ G
Sbjct: 566 VSRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTG 625
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRY 219
+ + L + G + +VD G+ + DA + + K ++V W +++
Sbjct: 626 L-EILSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSC 684
Query: 220 LVAGN 224
V G+
Sbjct: 685 RVYGD 689
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 301/620 (48%), Gaps = 41/620 (6%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ ARK+ + P N I + K G++ AR LFD MP+R +W ++G
Sbjct: 64 VSAARKVYDEM----PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGW 119
Query: 118 YTQNGFPGRTLELFLDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
Y +N +LF M + S + +T+ +L + + Q+H VK GF
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 176 GNVILESS--LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
N L S L+ +Y + + A +F++I K++V++N ++ Y G E++ +F
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
KM + +P +FTF+ L A L G Q+H + + F D V + + Y K
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK-- 297
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
R+ E R LF+EMPE + +S+N +++ Y++
Sbjct: 298 -----------------------------HDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+ ++ +L F M+ D +L++ A LS ++MG+++H S + V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
N+L+DMY KC A + F + QR VSW A+++GY ++G + F++M+
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 474 -RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
R + TF T+L A A+ +SL GKQ+H F+IR+ NV LV++Y KC ++ A+
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF+E + + N++I N G A+ F M + G++PD ++ G+L AC H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
V+ ++F +M YGI P+ +HY CM+ L R G E E ++ MPF P M +
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 653 FDKCRKNGYATLGEWAARRL 672
+ CR + +L E AA +L
Sbjct: 628 LNACRIHKNQSLAERAAEKL 647
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 18/337 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + + A+ ++ R+L + + + N ++ Y KC ++A +F +P
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+R SW A++ Y Q G G L+LF M S + A+Q T+A VL++SA L + KQ
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I++ G NV S LVD Y KC + DA ++F+++ ++NAVSWN ++ + G+
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS---FLSSPYEGMQ----IHGVIIKIDFEG 277
G+ A+ F KM+ ++P + + L ACS F+ E Q I+G+ K
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH-- 591
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAI----SGRIREAREL 332
+ ++ + GR +A L+D+ P E + I W+S+++ I S R A +L
Sbjct: 592 ----YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
F+ R+ ++ +M Y + W++ D MR+
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 223/518 (43%), Gaps = 73/518 (14%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++++ I+K GF + + +V+ + ++ AR+++D++ +KN VS N ++ ++
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 222 AGNGKEAVVMF---------------------------FKMLREDIR------PLNFTFA 248
G+ A +F FK+ R+ R P + TF
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS--LTEMYVKCGRLEDARGLLDQPD 306
L C+ Q+H +K+ F+ + + S L + Y + RL+ A L ++
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E++ +++ ++++GY G L+ E++
Sbjct: 212 EKDSVTFNTLITGYEKDG-------------------------------LYTESIHLFLK 240
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MR++ T +L GL + +G+++H +S + V N +LD Y K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ---WETRPSKFTFETL 483
+ R+ F +M + D VS+N V++ Y++ Q E ++ F EMQ ++ R F F T+
Sbjct: 301 VLETRMLFDEMPE-LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR--NFPFATM 357
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+ AN+SSL+ G+Q+HC + + + +LV++Y KC E A +FK
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ ++I G+ L++F M+ ++ D TF +L A ++ L Q +
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH-A 476
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ G + + ++ +Y + G +K+ MP
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 178/390 (45%), Gaps = 13/390 (3%)
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++ IIK F+ D + E ++ G++ AR + D+ +N +S +++SG+ +G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLI 382
+ AR+LF+ MP+R V++W ++ Y R+ + EA M +++ D VT +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIF--VSNALLDMYRKCGNLRSARIWFYQMSQR 440
L C +VH F + + +N F VSN LL Y + L A + F ++ +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE- 212
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+D V++N ++TGY + G E++ F +M Q +PS FTF +L A + G+Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H + + + +++ Y+K + +F E LD + N +I + ++
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ---LEH 616
+L F M+ G + F +L + ++++ Q + C+ + L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ----LHCQALLATADSILHV 388
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ +Y + +E E +P TV
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K TK +L++D+ S +A + + AS +++ ++L + ++ VF +
Sbjct: 438 KLFTKMRGSNLRADQ----STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG++ DA +F+EMP+R+ SWNA++ A+ NG + F M SG+ +
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 144 ITYANVL 150
++ VL
Sbjct: 554 VSILGVL 560
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 194/656 (29%), Positives = 313/656 (47%), Gaps = 32/656 (4%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
L ++ + K + ++T VF+ ++ I Y + +FD ++D
Sbjct: 38 LSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFL 97
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN+++ ++ NG + + ++ M + NQ T ++ + AE L L K +HGL+
Sbjct: 98 WNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVS 157
Query: 171 KRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K G F N + SS V Y KC VM DA MFD+I ++ VSW +V Y+ + ++ +
Sbjct: 158 KSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGL 217
Query: 230 VMFFKMLR--EDIRPLNF-TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+M R D +N T AC L + G +HG+ +K VV SL
Sbjct: 218 ECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLL 277
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----I 342
MY KCG +E+A Q ++++ SWTS++ A G + E LF +M +V I
Sbjct: 278 SMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGI 337
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE----- 397
+ +L G+ S++ +E F L+ + +D +L++ + ++
Sbjct: 338 VVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGV 397
Query: 398 ---------------VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
VH +I +N ++ ++N+L+DMY K GNL A W +RD
Sbjct: 398 HEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIA--WKMFCRTQRD 455
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHC 501
V+WN +++ Y G EA+T F EM E P+ T +L+AC ++ SLE+GK +H
Sbjct: 456 VVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQ 515
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
++ +E+NV ALV++Y KC LE + +F DVI N MI G+ +
Sbjct: 516 YIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANS 575
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+EVF M++ +KP+ ITF +L AC H G V Q FD M+ Y I P L+H+ CM
Sbjct: 576 AMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQ-YYSIKPNLKHFACMA 634
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G ++E ED V MP P + + C+ + +G A+ E +P
Sbjct: 635 DLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDP 690
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/611 (26%), Positives = 300/611 (49%), Gaps = 32/611 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KCG + A +FD+M +D SW M+ Y +G L+L +M +
Sbjct: 266 NSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIK 325
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+I+ N + ++ E +L K++H ++ G ++++ + +V Y KC + A+
Sbjct: 326 MNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEF 385
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F ++ ++ V W+ + + AG EA+ +F +M E ++P ++ + AC+ +SS
Sbjct: 386 FLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSS 445
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +H +IK D D V +L MY +C A L ++ +++++W ++++G+
Sbjct: 446 RLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGF 505
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G R A E+F + V D T+
Sbjct: 506 TKCGDPRLALEMFLRLQLSGV-------------------------------QPDSGTMV 534
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L+ CA L ++ +G HG I +N S + V AL+DMY KCG+L +A F+
Sbjct: 535 SLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHV 594
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
+D+VSWN ++ GY G + EA+++F++M+ E+ RP+ TF T+L A + +S L +
Sbjct: 595 KDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAF 654
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H +IR + + + +L+++Y K L Y+ + F E + I N+M+ G+ + +G
Sbjct: 655 HACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQG 714
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
AL +F LM++ + D +++ +L AC H G ++ F SM K+ + P +EHY C
Sbjct: 715 EVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYAC 774
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
M+ L G E+ +++MP P + + C+ + LGE A L +L P
Sbjct: 775 MVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRN 834
Query: 680 PFQFKITTNRF 690
+ + ++ +
Sbjct: 835 AVHYIVLSDIY 845
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 158/612 (25%), Positives = 289/612 (47%), Gaps = 39/612 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP Y+ + + + C + E + ++ + VF+ ++ Y K G+LD+AR
Sbjct: 124 EPDKYT-FTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNAR 182
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEE 156
+FD+MP +D SWNAM+ +Q+ P LE+F M GV + ++ N+ + +
Sbjct: 183 KVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRL 242
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
++ K +HG +V+R G ++ +SL+D Y KC + A ++FD + K+ +SW ++
Sbjct: 243 EDVDSCKSIHGYVVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMM 300
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y+ G E + + +M R+ I+ + N++ A + +G ++H +++
Sbjct: 301 AGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMT 360
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV + MY KCG L+ A+ + R+++ W++ +S +G EA +F EM
Sbjct: 361 SDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEM 420
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+ D+ L +++ CA +S ++GK
Sbjct: 421 QHEGL-------------------------------KPDKTILSSLVSACAEISSSRLGK 449
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H ++ + D S+I V+ L+ MY +C + A F +M +D V+WN ++ G+ +
Sbjct: 450 MMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRM-HYKDVVAWNTLINGFTKC 508
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G A+ F +Q +P T +LL+ACA + L G H +I+N E + +
Sbjct: 509 GDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVK 568
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSL-DVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL+++Y KC L A +F + + D + N MI G+ HN EA+ F MK E +
Sbjct: 569 VALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESV 628
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+P+ +TF IL A + ++ A+ F + + G I +I +Y + G + E
Sbjct: 629 RPNLVTFVTILPAVSYLSILREAMAFHACI-IRMGFISSTLIGNSLIDMYAKSGQLSYSE 687
Query: 635 DFVNRMPFNPTV 646
+ M T+
Sbjct: 688 KCFHEMENKGTI 699
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 261/528 (49%), Gaps = 37/528 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN+++ AY++ ++ + M++ G+ ++ T+ VL++ L+ +H I
Sbjct: 95 WNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIA 154
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
R +V + + LVD Y K + +AR++FD + K+ SWN ++ + N EA+
Sbjct: 155 SRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALE 214
Query: 231 MFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F +M + E + P + + N A S L IHG +++ G VV SL +MY
Sbjct: 215 IFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG--VVSNSLIDMY 272
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG ++ A + DQ ++ ISW ++++GY G E +L +EM +R I N
Sbjct: 273 SKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEM-KRKHIKMN---- 327
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
K ++ L T+D+++ GKEVH + + +S
Sbjct: 328 --------KISVVNSVLAATETRDLEK------------------GKEVHNYALQLGMTS 361
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+I V+ ++ MY KCG L+ A+ +F + + RD V W+A L+ + G EA++ F EM
Sbjct: 362 DIVVATPIVSMYAKCGELKKAKEFFLSL-EGRDLVVWSAFLSALVQAGYPGEALSIFQEM 420
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
Q E +P K +L++ACA ISS GK +HC+VI+ ++ LV +YT+C
Sbjct: 421 QHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSF 480
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
YA+ +F DV+ N++I GF R ALE+F ++ G++PD T +L AC
Sbjct: 481 MYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSAC 540
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
++ L + F ++ K GI ++ +I +Y + G + E+
Sbjct: 541 ALLDDLYLGICFHGNI-IKNGIESEMHVKVALIDMYAKCGSLCTAENL 587
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 205/428 (47%), Gaps = 34/428 (7%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T + + + Y KCG L A+ F + RD W+A L A Q G+PG L +F +
Sbjct: 360 TSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQE 419
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M H G+ ++ ++++ + AE + K +H ++K ++ + ++LV Y +C
Sbjct: 420 MQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKS 479
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
A +F+ + K+ V+WN ++ + G+ + A+ MF ++ ++P + T + L A
Sbjct: 480 FMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSA 539
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIIS 312
C+ L Y G+ HG IIK E + V +L +MY KCG L A L ++ +S
Sbjct: 540 CALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVS 599
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W +++GY +G EA FN+M +V
Sbjct: 600 WNVMIAGYLHNGCANEAISTFNQMKLESVRP----------------------------- 630
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ VT IL + LS ++ H I R + S+ + N+L+DMY K G L +
Sbjct: 631 --NLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEK 688
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANIS 491
F++M + + +SWNA+L+GYA GQ E A+ FS MQ P ++ ++L+AC +
Sbjct: 689 CFHEM-ENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAG 747
Query: 492 SLEQGKQI 499
+++G+ I
Sbjct: 748 LIQEGRNI 755
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 199/463 (42%), Gaps = 47/463 (10%)
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ I N + + WN ++R Y +EA+ + M + P +TF L AC+ +
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
EG+ IH I + E D + L +MY K G L++AR + D+ +++ SW +++SG +
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLS 204
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
S EA E+F M + + D V++
Sbjct: 205 QSSNPCEALEIFQRMQMEEGV------------------------------EPDSVSILN 234
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF--VSNALLDMYRKCGNLRSARIWFYQMSQ 439
+ + L ++ K +HG++ R +F VSN+L+DMY KCG ++ A F QM
Sbjct: 235 LAPAVSRLEDVDSCKSIHGYVVRR----CVFGVVSNSLIDMYSKCGEVKLAHQIFDQM-W 289
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+D +SW ++ GY G E + EM+ + + +K + + A LE+GK+
Sbjct: 290 VKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKE 349
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H + ++ ++V +V +Y KC L+ A F D+++ ++ +
Sbjct: 350 VHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGY 409
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLE 615
EAL +F M+ EG+KPD ++ AC + +L M C K + +
Sbjct: 410 PGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLG----KMMHCYVIKADMGSDIS 465
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVP--MLRKIFDKC 656
++ +Y R NRM + V L F KC
Sbjct: 466 VATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKC 508
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 307/617 (49%), Gaps = 36/617 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
VF+ N I Y KCG+L AR LFD M + D SWN+++ A+ G L LF M
Sbjct: 183 VFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRM 242
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
GV +N T+ + L++ + + + +H +I+K +V + ++L+ Y C M
Sbjct: 243 QEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQM 302
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA R+F + K+ VSWN ++ + +A+ F M +P + N + A
Sbjct: 303 EDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAAS 362
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
++ GM++H IK + + + SL +MY KC
Sbjct: 363 GRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCC-------------------- 402
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++ F MPE+++ISW ++AGY ++ +AL+ + ++ D+
Sbjct: 403 -----------VKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDV 451
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D + +G IL C+GL K+ KE+HG++ + + +I + NA++++Y + + AR F
Sbjct: 452 DPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVF 510
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
++ + D VSW +++T G + EA+ F+ + + P T ++L A A +SSL
Sbjct: 511 ESINSK-DIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSL 569
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
++GK+IH F+IR + + + +LV++Y +C +E A +F D+I+ SMI
Sbjct: 570 KKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINAN 629
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G++A+++F M E + PDHITF +L AC H G V Q F+ M+ +Y + P
Sbjct: 630 GMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPW 689
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY C++ L R ++E FV MP P+ + + CR + LGE AA++L
Sbjct: 690 PEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLL 749
Query: 674 ELNPWAPFQFKITTNRF 690
+LN + + +N F
Sbjct: 750 QLNTENSGNYVLVSNTF 766
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 298/598 (49%), Gaps = 38/598 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESN-LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
Y+ +LCAS KA+ + ++L ++ L T VFL + + YGKCG+ DA +FD+M
Sbjct: 49 YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM 108
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ER +WNAM+GA G +EL+ +M GVS + T+ VL++ E +
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGC 168
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLV 221
++HG+ VK G+ G V + ++L+ Y KC + AR +FD ++ + VSWN I+ ++
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G EA+ +F +M + +TF +AL AC + G IH VI+K + D V
Sbjct: 229 EGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYV 288
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY CG++EDA ER +F M ++
Sbjct: 289 SNALIAMYANCGQMEDA--------ER-----------------------VFKSMLFKDC 317
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN +L+G ++ ++ +A++ M+ + + DQV++ ++ + + G EVH +
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
++ SN+ + N+L+DMY KC ++ F M + +D +SW ++ GYA+ +
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPE-KDLISWTTIIAGYAQNECHLD 436
Query: 462 AMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ ++Q E ++L AC+ + S + K+IH +V++ +++ + A+V
Sbjct: 437 ALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVN 495
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
VY + ++YA VF+ +S D++ SMI HN EALE+F + + I+PD IT
Sbjct: 496 VYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLIT 555
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
+L A ++K + + + G + ++ +Y R G M+ + N
Sbjct: 556 LVSVLYAAAALSSLKKGKEIHGFL-IRKGFFLEGLIANSLVDMYARCGTMENARNIFN 612
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 227/476 (47%), Gaps = 40/476 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
E +Y+ + L Q C I R + + ++ V++ N I Y CG ++DA
Sbjct: 248 ESNTYTFVSAL-QACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAE 306
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F M +D SWN +L QN + F DM SG +Q++ N++ +S
Sbjct: 307 RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSA 366
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L ++H +K G N+ + +SL+D YGKC + F+ + K+ +SW I+
Sbjct: 367 NLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIA 426
Query: 218 RYLVAGNGKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
Y +A+ + K+ E D+ P+ + L ACS L S +IHG ++K
Sbjct: 427 GYAQNECHLDALNLLRKVQLEKMDVDPM--MIGSILLACSGLKSEKLIKEIHGYVLKGGL 484
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D ++ ++ +Y + ++ AR + + + ++I+SWTS+++ +G EA ELFN
Sbjct: 485 -ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNS 543
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ E N+ + D +TL +L A LS +K G
Sbjct: 544 LIETNI-------------------------------EPDLITLVSVLYAAAALSSLKKG 572
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
KE+HGF+ R + ++N+L+DMY +CG + +AR F + Q RD + W +++
Sbjct: 573 KEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ-RDLILWTSMINANGM 631
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G ++A+ FS+M E P TF LL AC++ + +GKQ H +++N Y++
Sbjct: 632 HGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKL 686
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 186/403 (46%), Gaps = 35/403 (8%)
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARG 300
PL ++ AL C+ + +G Q+H +K D V L + MY KCG DA
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAV- 102
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
++F++M ER + +WNAM+ + + EA
Sbjct: 103 ------------------------------KVFDKMSERTIFTWNAMIGACVSAGRYVEA 132
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
++ MR +D T +L C E ++G E+HG + Y +FV NAL+ M
Sbjct: 133 IELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAM 192
Query: 421 YRKCGNLRSARIWFYQ-MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
Y KCG+L AR+ F + ++ D VSWN++++ + G+S EA++ F MQ + +
Sbjct: 193 YAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTY 252
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF + L AC + ++ G+ IH ++++ + +V AL+ +Y C +E A RVFK
Sbjct: 253 TFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSM 312
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
D + N+++ G N+ +A+ F M+ G KPD ++ ++ A N+ LA
Sbjct: 313 LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANL-LAG 371
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ K+GI + +I +Y + +K + MP
Sbjct: 372 MEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 163/332 (49%), Gaps = 12/332 (3%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ + N + YG+ +D AR +F+ + +D SW +M+ NG LELF +
Sbjct: 487 ILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIE 546
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + + IT +VL ++A L K++HG ++++GF ++ +SLVD Y +C M +
Sbjct: 547 TNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMEN 606
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +F+ ++ ++ + W ++ + G GK+A+ +F KM E++ P + TF L+ACS
Sbjct: 607 ARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSH 666
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLL-DQPDERNIISW 313
EG Q H I+K +++ + L ++ + LE+A + + P E + W
Sbjct: 667 SGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+++ + RI +L E+ + ++ N +G + A D + ++
Sbjct: 726 CALLG----ACRIHSNNDL-GEVAAKKLLQLNTENSGNYVLVSNTFAADGRW---NDVEE 777
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+ + G L G S I++ ++H F+ R+
Sbjct: 778 VRSIMKGNKLKKKPGCSWIEVENKIHTFMARD 809
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 132/310 (42%), Gaps = 25/310 (8%)
Query: 353 RSLLWKEALD-----FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRND 406
R + KEA F + TT+ Q L +CA + G+++H F+ +
Sbjct: 18 RPISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQN 77
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
Y ++F+ + MY KCG+ A F +MS+R +WNA++ G+ EA+ +
Sbjct: 78 YLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT-IFTWNAMIGACVSAGRYVEAIELY 136
Query: 467 SEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
EM+ FTF +L AC G +IH ++ Y V AL+ +Y KC
Sbjct: 137 KEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKC 196
Query: 526 CCLEYAIRVFKESSSL---DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
L A RV +S + D + NS+I EAL +F M++ G++ + TF
Sbjct: 197 GDLGGA-RVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFV 255
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY------ECMIKLYCRYGYMKELEDF 636
L AC EG F R + +I + H+ +I +Y G M++ E
Sbjct: 256 SALQAC--EGPT-----FIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308
Query: 637 VNRMPFNPTV 646
M F V
Sbjct: 309 FKSMLFKDCV 318
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 190/626 (30%), Positives = 309/626 (49%), Gaps = 54/626 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y KC L+ A +FDEMP RD SWNA++ A+ +G T +L M S +
Sbjct: 32 NNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHA 91
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T+ ++L+ A +L + +QLH +++K G NV S+L+D Y KC + D +
Sbjct: 92 FDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVV 151
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR-------PLNFTFANALFA 253
F + +N VSWN +V Y G+ A + M E + PL NA+F
Sbjct: 152 FQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMF- 210
Query: 254 CSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
Y+ MQ+H I+K E + V + Y +C L+DA + D
Sbjct: 211 -------YKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFD--------- 254
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF-VFL-MRKT 370
G + R++++WN+ML Y + KE L F VFL M+
Sbjct: 255 ------GAVLC---------------RDLVTWNSMLGAYL--MHEKEDLAFKVFLDMQNF 291
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN--LR 428
+ D T I+ C+ GK +HG + + +++ VSNAL+ MY + + +
Sbjct: 292 GFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCME 351
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAAC 487
A F+ M +D +WN++L GY + G SE+A+ F +M+ +TF ++ +C
Sbjct: 352 DALRIFFSM-DLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSC 410
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+++++L+ G+Q H ++ ++ N +L+ +Y+KC +E A + F+ +S + I+ N
Sbjct: 411 SDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWN 470
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
S+I G+ + +G AL++F +MK+ +K DHITF +L AC H G V+ F +SM
Sbjct: 471 SIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESD 530
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
+GI P+ EHY C I LY R G++K+ V MPF P +L+ + CR G L
Sbjct: 531 FGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQ 590
Query: 668 AARRLNELNPWAPFQFKITTNRFDRY 693
A+ L EL P + I + + R+
Sbjct: 591 IAKILLELEPEEHCTYVILSEMYGRF 616
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 205/440 (46%), Gaps = 36/440 (8%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
++L S ++ + VF + ++ Y KCG +DD +F MPER+ SWN ++ +Y++
Sbjct: 113 GQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSR 172
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
G + M GV + T + +L + ++ QLH IVK G +
Sbjct: 173 VGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTV 232
Query: 181 ESSLVDAYGKCMVMTDARRMFDD-IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
++ + AY +C + DA R+FD + ++ V+WN ++ YL+ A +F M
Sbjct: 233 CNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFG 292
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR--LED 297
P +T+ + ACS G +HG++IK + V +L MY++ +ED
Sbjct: 293 FEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMED 352
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
A + D ++ +W SI++GY G +A LF +
Sbjct: 353 ALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQ---------------------- 390
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
MR +ID T ++ C+ L+ +++G++ H + + +N +V ++L
Sbjct: 391 ---------MRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSL 441
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
+ MY KCG + AR F + + + + + WN+++ GYA+ GQ A+ F M + + +
Sbjct: 442 IFMYSKCGIIEDARKSF-EATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLD 500
Query: 477 KFTFETLLAACANISSLEQG 496
TF +L AC++ +E+G
Sbjct: 501 HITFVAVLTACSHNGLVEEG 520
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 194/438 (44%), Gaps = 34/438 (7%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +K G + ++L+ +Y KC + A ++FD++ +++ VSWN I+ + +G+
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ M R + TF + L +++ G Q+H V++K+ + +L
Sbjct: 76 DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCGR++D + ERN +SW ++V+ Y+ G A + + M V
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGV---- 191
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+ID T+ +L + K+ ++H I ++
Sbjct: 192 ---------------------------EIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKH 224
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
V NA + Y +C +L+ A F RD V+WN++L Y + + A
Sbjct: 225 GLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKV 284
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F +MQ + P +T+ ++ AC+ GK +H VI+ + +V AL+ +Y +
Sbjct: 285 FLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIR 344
Query: 525 CC--CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
C+E A+R+F D NS++ G+ +AL +F M+ I+ DH TF
Sbjct: 345 FNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFS 404
Query: 583 GILLACIHEGNVKLALQF 600
++ +C ++L QF
Sbjct: 405 AVIRSCSDLATLQLGQQF 422
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 26/319 (8%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
++DA +F M +D +WN++L Y Q G L LFL M + + T++ V+RS
Sbjct: 350 MEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRS 409
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
++ L + +Q H L +K GF N + SSL+ Y KC ++ DAR+ F+ NA+ W
Sbjct: 410 CSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVW 469
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N I+ Y G G A+ +F+ M ++ + TF L ACS + G+ G
Sbjct: 470 NSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACS-----HNGLVEEGCNFI 524
Query: 273 IDFEGDDVV------LGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGR 325
E D + ++Y + G L+ A L++ P E + + +++ G
Sbjct: 525 ESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGD 584
Query: 326 IREARELFN---EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
I A ++ E+ ++ + Y R +W E +MR+ + + +V
Sbjct: 585 IELASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRE--RGVKKV----- 637
Query: 383 LNVCAGLSEIKMGKEVHGF 401
G S I++ VH F
Sbjct: 638 ----PGWSWIEVKNNVHAF 652
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 184/605 (30%), Positives = 298/605 (49%), Gaps = 36/605 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+F+ N + YG G +D+AR +FDE +R+ SWN M+ A+ +N +ELF +M
Sbjct: 135 IFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMV 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
SGV N+ ++ V+ + +L +++H ++V+ G+ +V ++LVD Y K +
Sbjct: 195 WSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIH 254
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL--FA 253
A +F + + VSWN + ++ G+ + A+ + +M + P FT ++ L A
Sbjct: 255 MAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
+ + G QIHG +IK + DD + +L +MY K G L+DA
Sbjct: 315 GAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDA--------------- 359
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
R++F +P ++++ WNA+++G + E+L MRK D
Sbjct: 360 ----------------RKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSD 403
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
I++ TL +L A L I +VH + + S+ V N L+D Y KC LR A
Sbjct: 404 INRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKV 463
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F + S + +++ +++T ++ E+A+ F EM + P F +LL ACA++S+
Sbjct: 464 FEEHSSD-NIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 522
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
EQGKQ+H +I+ + +V ALV Y KC +E A F V+ ++MI G
Sbjct: 523 YEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGG 582
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ G+ AL+VF M E I P+HIT +L AC H G V A +F SM+ +GI
Sbjct: 583 LAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDR 642
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
EHY CMI L R G + + + VN MPF + + R + LG+ AA +L
Sbjct: 643 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKL 702
Query: 673 NELNP 677
L P
Sbjct: 703 FVLEP 707
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 249/510 (48%), Gaps = 35/510 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y KC AR +FDE P+ SW++++ AY+ N P L F M GV
Sbjct: 41 NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+ VL+ + + G+ Q+H + V G G++ + ++LV YG + +ARR+
Sbjct: 101 CNEFALPIVLKCAPDA---GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRV 157
Query: 201 FDD-IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
FD+ +++NAVSWN ++ ++ +AV +F +M+ +RP F F+ + AC+
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G ++H ++++ ++ D +L +MY K G + A + + + +++SW + +SG
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+ G + A EL +M ++ VF + K
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVP-------------------NVFTLSSILKACAGAG- 317
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+G+++HGF+ + S+ ++ AL+DMY K G L AR F +
Sbjct: 318 ---------AGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVF-EWIP 367
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R+D + WNA+++G + G E+++ F M+ E + ++ T +L + A++ ++ Q
Sbjct: 368 RKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQ 427
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H + + + L++ Y KC CL YA +VF+E SS ++I SMI +
Sbjct: 428 VHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDH 487
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLAC 588
G +A+++F M ++G++PD +L AC
Sbjct: 488 GEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 212/449 (47%), Gaps = 35/449 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S+ + RK+ + +V VF N ++ Y K G++ A +F ++P+ D SW
Sbjct: 212 CTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSW 271
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQLHGLI 169
NA + +G LEL L M SG+ N T +++L+ + A + +Q+HG +
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFM 331
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K + + +LVD Y K ++ DAR++F+ I K+ + WN ++ G E++
Sbjct: 332 IKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESL 391
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F +M +E T A L + + L + + Q+H + KI F D V+ L + Y
Sbjct: 392 SLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSY 451
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KC L A + ++ NII++TS+++ + +A +LF EM + +
Sbjct: 452 WKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGL-------- 503
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ D L +LN CA LS + GK+VH + + + +
Sbjct: 504 -----------------------EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMT 540
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++F NAL+ Y KCG++ A + F + + VSW+A++ G A+ G + A+ F M
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADLAFSGLPD-KGVVSWSAMIGGLAQHGHGKRALDVFRRM 599
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGK 497
E P+ T ++L AC + +++ K
Sbjct: 600 VDERIAPNHITLTSVLCACNHAGLVDEAK 628
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + L + L CAS A + +++ ++L+ VF N + Y KCG+++
Sbjct: 501 KGLEPDPFVLSS-LLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIE 559
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
DA F +P++ SW+AM+G Q+G R L++F M ++ N IT +VL
Sbjct: 560 DADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL 615
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
+ LL A SL G IH ++++ + R L+ Y+KC A RVF E+
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKS--GLLHAFRNHLLSFYSKCRLPGSARRVFDET 63
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
+ +S++ + +N REAL F M+ G++ + I+L C + + + +
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFAL-PIVLKCAPDAGLGVQV 122
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
++ G+ + ++ +Y +G++ E
Sbjct: 123 H---AVAVSTGLSGDIFVANALVAMYGGFGFVDE 153
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 316/617 (51%), Gaps = 42/617 (6%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + I+ Y + G +D A LFD + ++D WN ML Y + G ++ F M
Sbjct: 170 FVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMD 229
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+S N +T+ VL A +L + + QLHGL+V G +++SL+ Y KC DA
Sbjct: 230 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDA 289
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F + + V+WN ++ Y+ +G +E+++ F++M+ + P TF++ L + S
Sbjct: 290 IKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKF 349
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ QIH I++ D + +L + Y KC RG
Sbjct: 350 ENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKC------RG----------------- 386
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+ A+++F++ +V+ + AM++GY + L +AL+ + K +++
Sbjct: 387 --------VSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEI 438
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL IL V GL +K+G+E+HGFI + + + + A++DMY KCG + A F ++
Sbjct: 439 TLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRL 498
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETL-----LAACANISS 492
S +RD VSWN+++T A+ A+ F +M S F+ + L+ACAN+ S
Sbjct: 499 S-KRDIVSWNSMITRCAQSDNPSAAIDIFRQMG----VSGICFDCVSISAALSACANLPS 553
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
GK IH F+I++ ++V L+++Y KC L+ A+ VF +++ NS+I
Sbjct: 554 ESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAA 613
Query: 553 FCHNERGREALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ ++ + +++L +F +++K G +PD ITF I+ C H G+V ++FF SM YGI
Sbjct: 614 YGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQ 673
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
PQ EHY C++ L+ R G + E + V MPF P + + R + L + A+ R
Sbjct: 674 PQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSR 733
Query: 672 LNELNPWAPFQFKITTN 688
L +L+PW + + +N
Sbjct: 734 LMDLDPWNSGYYVLISN 750
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 147/628 (23%), Positives = 280/628 (44%), Gaps = 85/628 (13%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L Q C++ + + +++ + ++ + + R + Y CG+ + +F + R
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 108 GG--SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
WN+++ ++ + G + L + M GVS + T+ ++++ + L
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
+ G N + SSL+ AY + + A ++FD + K+ V WNV++ Y G
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCG-A 215
Query: 226 KEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVII--KIDFEGDDVVL 282
++V+ F ++R D I P TF L C+ G+Q+HG+++ +DFEG +
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGS--IK 273
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL MY KCGR +DA L + ++W ++SGY SG + E+ F EM V+
Sbjct: 274 NSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVL 333
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
D +T +L + ++ +++H +I
Sbjct: 334 P-------------------------------DAITFSSLLPSVSKFENLEYCRQIHCYI 362
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R+ S +IF+++AL+D Y KC + A+ F Q + D V + A+++GY G + +A
Sbjct: 363 MRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNS-VDVVVFTAMISGYLHNGLNIDA 421
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE--INVVCRGALV 519
+ F + + + P++ T ++L + +L+ G+++H F+I+ ++ N+ C A++
Sbjct: 422 LEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGC--AVI 479
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC + A +F S D++ NSMI ++ A+++F M GI D +
Sbjct: 480 DMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCV 539
Query: 580 TFHGILLAC-----------IHE------------------------GNVKLALQFFDSM 604
+ L AC IH GN+K A+ FD+M
Sbjct: 540 SISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTM 599
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ K + + +I Y +G +K+
Sbjct: 600 KEK-----NIVSWNSIIAAYGNHGKLKD 622
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 138/264 (52%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL + I+ Y KC + A+ +F + D + AM+ Y NG LE+F +
Sbjct: 371 IFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVK 430
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+S N+IT ++L L L + ++LHG I+K+GF + +++D Y KC M
Sbjct: 431 VKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 490
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + ++ VSWN ++ R + N A+ +F +M I + + AL AC+
Sbjct: 491 AYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACAN 550
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG +IK D +L +MY KCG L+ A + D E+NI+SW SI
Sbjct: 551 LPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSI 610
Query: 317 VSGYAISGRIREARELFNEMPERN 340
++ Y G+++++ LF+EM E++
Sbjct: 611 IAAYGNHGKLKDSLCLFHEMVEKS 634
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L L+L C+ L+ ++ GK+VH F+ N S + + +L MY CG+ + FY++
Sbjct: 34 LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93
Query: 439 QRRDKV-SWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
R + WN++++ + R G +A+ + +M + P TF L+ AC + + +
Sbjct: 94 SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+ + V + N +L++ Y + ++ A ++F D +I N M+ G+
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
++ F LM+ + I P+ +TF +L C + + L +Q
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 257
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 179/618 (28%), Positives = 300/618 (48%), Gaps = 38/618 (6%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+P V L + + K G L DA LFD MP ++ +W +++ YT+NG P L +F D
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M SGV+ N L + A+ L +Q+H L V+ GF G+ + S L++ Y +C
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGS 164
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A+ +FD + + + V + ++ + G + A +ML++ ++P T L A
Sbjct: 165 LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C + G QIHG +IK GL Q ++ S
Sbjct: 225 CPRVL----GQQIHGYLIK-------------------------KIGLRSQ----SVYSS 251
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T+++ Y+ +G + A+ +F+ + +NV+SW +M+ Y R +EAL M D
Sbjct: 252 TALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVD 311
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++ L ++L C I +G+++H ++D ++I VSNALL MY + G +
Sbjct: 312 PNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 368
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
++ + D VSW ++ + G E+A+ +M E P+ + F ++L++CA+++S
Sbjct: 369 LNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L+QG Q HC ++ + + AL+ +Y+KC + A F + DV NS+I G
Sbjct: 428 LDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHG 487
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ +ALEVF M+ GIKPD TF G+L+ C H G V+ FF M +Y P
Sbjct: 488 HAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTP 547
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
HY CMI + R G E +N MPF P + + + C+ + +G+ AA RL
Sbjct: 548 APSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRL 607
Query: 673 NELNPWAPFQFKITTNRF 690
EL+ + + +N +
Sbjct: 608 MELSDRDSASYVLMSNIY 625
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 201/439 (45%), Gaps = 31/439 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y + G A+ +FD + ++ SW +M+ Y ++G L++F DM GV N+
Sbjct: 255 IDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNE 314
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ VL + +G+ +QLH +K ++ + ++L+ YG+ ++ + M +
Sbjct: 315 FALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNK 371
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I+N + VSW + G G++A+ + +M E P + F++ L +C+ ++S +G
Sbjct: 372 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 431
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
MQ H + +K+ + + +L MY KCG++ AR D ++ SW S++ G+A
Sbjct: 432 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 491
Query: 324 GRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
G +A E+F++M + ++ +L G S + +E F LM IDQ +
Sbjct: 492 GDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM------IDQYSF 545
Query: 380 GLILNVCAGLSEIKMGK-----EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ A + ++ +G+ E I+ + + + LL + NL ++
Sbjct: 546 TPAPSHYACMIDM-LGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAA 604
Query: 435 YQMSQRRDKVSWNAVLTG--YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
++ + D+ S + VL YA G+ E+A M ET + A S
Sbjct: 605 DRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMD----------ETGVKKDAGCSW 654
Query: 493 LEQGKQIHCFVIRNCYEIN 511
+E ++H F R+ N
Sbjct: 655 IEINNEVHTFASRDMSHPN 673
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 270/535 (50%), Gaps = 45/535 (8%)
Query: 161 VSKQLHGL---IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
SKQ+H + I+ GF N + LV MT AR++FD I + N WN + R
Sbjct: 113 TSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFR 172
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y + + +E V +FF+M DIRP FTF L +C +++ EG Q+H +IK F G
Sbjct: 173 GYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRG 232
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V +L +MY G + DA + + ERN+++WTS+++GY +S + AR LF+ P
Sbjct: 233 NPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAP 292
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
ER+V+ WN M++GY EA RK ++
Sbjct: 293 ERDVVLWNIMVSGYIEGGDMVEA-------RKLFXEMP---------------------- 323
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+ ++ N +L Y GN+ + F +M +R + SWNA++ GYA G
Sbjct: 324 ----------NRDVMFWNTVLKGYATNGNVEALEGLFEEMPER-NIFSWNALIGGYAHNG 372
Query: 458 QSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
E + SF M E+ P+ T T+L+ACA + +L+ GK +H + + + NV
Sbjct: 373 LFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVG 432
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC +E AI VF+ + D+I N++I G + RG +AL +F MK G K
Sbjct: 433 NALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQK 492
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD ITF GIL AC H G V+ +F SM Y I+PQ+EHY CM+ + R G +++
Sbjct: 493 PDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXA 552
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
FV +MP + + CR L E A +RL EL P P + + +N +
Sbjct: 553 FVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIY 607
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 42/403 (10%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR LFD++P+ + WN+M Y Q+ + LF M + N T+ VL+S +
Sbjct: 152 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 211
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L +Q+H ++K GF GN + ++L+D Y + DA ++F ++ +N V+W +
Sbjct: 212 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 271
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y+++ + A +F D+ P
Sbjct: 272 INGYILSADLVSARRLF------DLAP--------------------------------- 292
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D V+ + Y++ G + +AR L + R+++ W +++ GYA +G + LF E
Sbjct: 293 ERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEE 352
Query: 336 MPERNVISWNAMLAGYTRSLLWKEAL-DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
MPERN+ SWNA++ GY + L+ E L F ++ ++ + TL +L+ CA L + +
Sbjct: 353 MPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDL 412
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK VH + + N++V NAL+DMY KCG + +A F M +D +SWN ++ G A
Sbjct: 413 GKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDT-KDLISWNTLIGGLA 471
Query: 455 RRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+ +A+ F +M+ +P TF +L AC ++ +E G
Sbjct: 472 MHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 514
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 147/325 (45%), Gaps = 22/325 (6%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+VEARKL + P V N ++ Y GN++ GLF+EMPER+ SWNA++G
Sbjct: 312 MVEARKLFXEM----PNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGG 367
Query: 118 YTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
Y NG L F M + S V N T VL + A L + K +H G G
Sbjct: 368 YAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKG 427
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
NV + ++L+D Y KC ++ +A +F + K+ +SWN ++ + G +A+ +FF+M
Sbjct: 428 NVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMK 487
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL-------GSLTEMY 289
+P TF L AC+ + +G + DD ++ G + +M
Sbjct: 488 NAGQKPDGITFIGILCACTHMGLVEDGFAYFQSM------ADDYLIMPQIEHYGCMVDML 541
Query: 290 VKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREAR---ELFNEMPERNVISWN 345
+ GRLE A + + P E + + W ++ I + A + E+ +N ++
Sbjct: 542 ARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYV 601
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKT 370
+ Y + W++ MR T
Sbjct: 602 MLSNIYGDAGRWEDVARLKVAMRDT 626
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/634 (27%), Positives = 320/634 (50%), Gaps = 34/634 (5%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTF--YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
L + A + + +A+ + ++ F +LN+ + Y KC + AR +FDE+P
Sbjct: 66 ELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIP 125
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW ++ T+NGF ++ F+++ + ++ + +++ + V +
Sbjct: 126 QKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEM 185
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++ RGF + +SL+ Y K + D+ ++F+ ++N+N VSWN ++ ++ G
Sbjct: 186 VHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGL 245
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA F +ML E+IRP F + A L +G I+ + +I + + V +
Sbjct: 246 YAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTA 305
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +M+ KCG + + SW+ VS ++ G +P W
Sbjct: 306 LIDMFAKCGCVTE--------------SWSVFVSNFSGCGV---------NLP------W 336
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NAM++G+T S +EA+ M + D T LN A + ++ K++HG I +
Sbjct: 337 NAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWK 396
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ S + + NAL+D Y KCG L + R F + +++SW ++T Y++ + E+A++
Sbjct: 397 SG-SIGVSLCNALMDAYAKCGELDAMRKLF-DTWEESNQISWTTLVTAYSQSSEWEDALS 454
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
FS+M + +P++ TF +LA+CA++ SLE G+Q+H + + + L+++Y
Sbjct: 455 VFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYA 514
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + AI+VF+ DVI +MI G+ + ++ALE+F M+ P+ TF
Sbjct: 515 KCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLC 574
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V L++F M +YG++P++EHY C++ + R G + E F+ +MP
Sbjct: 575 LLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIE 634
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR +G L + AA+++ NP
Sbjct: 635 PDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNP 668
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 289/598 (48%), Gaps = 40/598 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+E Y CG +D A + P R SWNA+L Y ++G + + +F + SG ++
Sbjct: 203 VEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISK 262
Query: 144 ITYANVLRSSAEELELGVSKQ---LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
T VL+ +ELG++K +HGL++KRG + +L + L++ Y KC+ DA +
Sbjct: 263 YTLPTVLKCC---MELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEV 319
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F I + V ++++ + EA +F +M ++P +TF S
Sbjct: 320 FARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDV 379
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
IH I+K F V ++ MYVK G ++DA D +I SW +++SG+
Sbjct: 380 NLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGF 439
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+F E+ V++ ++ T
Sbjct: 440 YSGNNCEHGLRIFKELICEGVLA-------------------------------NKYTYV 468
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C L +++ G +VH + ++ + + VS LLDMY + G +AR+ F ++ +R
Sbjct: 469 GILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKER 528
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
D SW V++ YA+ + E+A+ F M E RP+ T T L+ C++++ L G Q+
Sbjct: 529 -DVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQL 587
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H + I++ + +VV ALV++Y KC L A +F ES + D++ N++I G+ + G
Sbjct: 588 HSYTIKSGWNSSVV-SSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHG 646
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
+ALE F M EG PD ITF G+L AC H G + ++F + YGI P LEHY C
Sbjct: 647 YKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYAC 706
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M+ + + G + E E +N MP P + + I CR +G + E AA +L E P
Sbjct: 707 MVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQP 764
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/583 (27%), Positives = 262/583 (44%), Gaps = 45/583 (7%)
Query: 16 SSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTP 75
S+P P+P L+++E SY A Q CA+S+A+ + L + L+ P P
Sbjct: 41 SAPSPSPRDDERL----RLRAEELRSY---AAALQGCAASRALRRGKALHARLLRSGPRP 93
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
FL + + Y KCG L DAR +FD MP RD +W AM+ A T G G L LF +M+
Sbjct: 94 DAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMS 153
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
GV N A L++ +LG + Q+H VK + + SSLV+AY C +
Sbjct: 154 EEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVD 213
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A R D ++ VSWN ++ Y G+ + +++F K++ +T L C
Sbjct: 214 VAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCM 273
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G +HG++IK E D V+ L EMY KC ED
Sbjct: 274 ELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAED------------------ 315
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A E+F + E +V+ + M++ + R + EA D M +
Sbjct: 316 -------------AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPN 362
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
Q T + V + ++ + + +H I ++ +S V +A++ MY K G ++ A I +
Sbjct: 363 QYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDA-ILAF 421
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+ Q D SWN +L+G+ E + F E+ E +K+T+ +L C ++ L
Sbjct: 422 DLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLR 481
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G Q+H V+++ ++ + L+++Y + C A VF DV ++ +
Sbjct: 482 FGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYA 541
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEG 592
+ G +A+E F M +E +P+ T L LAC+ G
Sbjct: 542 KTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSG 584
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 270/495 (54%), Gaps = 40/495 (8%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A L LC ++ +AR + L+ VF+ NR I+ YGKCG LD AR +FD
Sbjct: 25 SPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDR 84
Query: 103 M-------------------------------PERDGGSWNAMLGAYTQNGFPGRTLELF 131
M PE+D SWN+M+ + Q+ L+ F
Sbjct: 85 MSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWF 144
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ M+ N ++ + L + + +L + Q+HGLI K + +V + S L+D Y KC
Sbjct: 145 VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC 204
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
++ ARR+FD ++ KN VSWN ++ Y G EA+ F +M +P T A+ +
Sbjct: 205 GLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVV 264
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNI 310
AC+ L++ EG+QIH ++K D +D++LG +L +MY KCGR+ +AR + D+ RN
Sbjct: 265 SACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNA 324
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S T++VSGYA S ++ AR +F + +++++SWNA++AGYT++ +EAL ++++
Sbjct: 325 VSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE 384
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEV------HGFIHRNDYSSNIFVSNALLDMYRKC 424
+ T G +LN A L+++++G++ HGF ++ +IFV N+L+DMY KC
Sbjct: 385 SVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKC 444
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
G++ F M + +D VSWN ++ GYA+ G EA+ F +M + +P T
Sbjct: 445 GSVEEGLRVFENMVE-KDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503
Query: 484 LAACANISSLEQGKQ 498
L AC++ +E+G++
Sbjct: 504 LCACSHAGLVEEGRR 518
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/610 (29%), Positives = 301/610 (49%), Gaps = 106/610 (17%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
LRSS + ++ +HG +++ FC V +++ L+D YGKC + AR++FD + +N
Sbjct: 37 LRSSRD------ARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNV 90
Query: 210 VSWNVIVRRYL--------------------------VAGNGK-----EAVVMFFKMLRE 238
S+N I+ + +AG + EA+ F +M R+
Sbjct: 91 FSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRD 150
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
D +++F + L ACS L G QIHG+I K + D + L + Y KCG
Sbjct: 151 DFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL---- 206
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ AR +F+ M E+NV+SWN ++ Y ++
Sbjct: 207 ---------------------------VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAI 239
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNAL 417
EAL+ M + D+VTL +++ CA L+ K G ++H + ++D + +++ + NAL
Sbjct: 240 EALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNAL 299
Query: 418 LDMYRKCGNLRSARIWFYQMSQR------------------------------RDKVSWN 447
+DMY KCG + AR F +M R +D VSWN
Sbjct: 300 VDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWN 359
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
A++ GY + G++EEA+ F ++ E+ P+ +TF LL A AN++ LE G+Q H V+++
Sbjct: 360 ALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKH 419
Query: 507 CY------EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ E ++ +L+++Y KC +E +RVF+ D + N+MI+G+ N G
Sbjct: 420 GFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGM 479
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EALE+F M + G KPDH+T G L AC H G V+ ++F SM ++G++P +HY CM
Sbjct: 480 EALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCM 539
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ L R G ++E +D + MP P + + C+ + TLG++ A ++ E++P +
Sbjct: 540 VDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSS 599
Query: 681 FQFKITTNRF 690
+ + N +
Sbjct: 600 GPYVLLANMY 609
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 226/424 (53%), Gaps = 39/424 (9%)
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
FA L C L S + +HG +I+ F + + L ++Y KCG L+ AR + D+
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
ERN+ S+ SI+S G + E+ LF+ MPE++ SWN+M+AG+ + ++EALD+
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + ++ + G L+ C+ L ++K+G ++HG I ++ YS ++F+ + L+D Y KCG
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA 485
+ AR F M + ++ VSWN ++T Y + G + EA+ +F M + +P + T ++++
Sbjct: 207 VGCARRVFDGM-EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265
Query: 486 ACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFK-------- 536
ACA +++ ++G QIH V++ + + +++ ALV++Y KC + A VF
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAV 325
Query: 537 ----------ESSSL-------------DVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+S+S+ D++ N++I G+ N EAL +F ++K+E
Sbjct: 326 SETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRES 385
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSM-----RCKYGIIPQLEHYECMIKLYCRYG 628
+ P H TF +L A + +++L Q + R + G P + +I +Y + G
Sbjct: 386 VCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCG 445
Query: 629 YMKE 632
++E
Sbjct: 446 SVEE 449
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 31/303 (10%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D +L++C L + + VHG + + + +F+ N L+D+Y KCG L AR F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 435 YQMSQR------------------------------RDKVSWNAVLTGYARRGQSEEAMT 464
+MS+R +D+ SWN+++ G+A+ + EEA+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 465 SFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M + + ++F + L+AC+ + L+ G QIH + ++ Y ++V L++ Y+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + A RVF +V+ N +I + N EALE FG M + G KPD +T
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
++ AC K +Q + L ++ +Y + G + E +RMP
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322
Query: 644 PTV 646
V
Sbjct: 323 NAV 325
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 18/152 (11%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P +F+ N I+ Y KCG++++ +F+ M E+D SWN M+ Y QNG+ LELF M
Sbjct: 429 PDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKM 488
Query: 135 NHSGVSANQITYANVL--RSSAEELELG------VSKQLHGLI-VKRGFCGNVILESSLV 185
SG + +T L S A +E G ++K+ HGL+ VK + + +V
Sbjct: 489 LESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKE-HGLLPVKDHY-------TCMV 540
Query: 186 DAYGKCMVMTDARRMFDDI-QNKNAVSWNVIV 216
D G+ + +A+ + + + + +AV W+ ++
Sbjct: 541 DLLGRAGCLEEAKDLIESMPKQPDAVVWSSLL 572
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/731 (26%), Positives = 339/731 (46%), Gaps = 82/731 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDD 95
P Y + L A +A+ E R+L ++ V FL + + YGKCG L D
Sbjct: 52 PPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPD 111
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS----GVSANQITYANVLR 151
A LFD MP R SWNA++GA +G G + ++ M S G + + T A+VL+
Sbjct: 112 AHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLK 171
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAV 210
+ E + ++HGL VK G + ++ ++LV Y KC ++ A R+F+ +++ ++
Sbjct: 172 ACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVA 231
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SWN + + G EA+ +F +M + ++T L C+ L+ G ++H +
Sbjct: 232 SWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAAL 291
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDA----RGLLDQ---------------------- 304
+K E + + +L MY +CG ++ A R + D+
Sbjct: 292 LKCGTEFN-IQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAI 350
Query: 305 ------------PDERNIISWTSIVS--GYAISGR------------------------- 325
PD I+S S V G I+GR
Sbjct: 351 DFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMY 410
Query: 326 -----IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ + +F+ M ++ +SW ++A Y +S + EA+ +K +D + +G
Sbjct: 411 IKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMG 470
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL C+GL I + K+VH + RN ++ + N ++D+Y +CG + A + ++M +
Sbjct: 471 SILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYA-LNIFEMLDK 528
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+D V+W +++ +A G EA+ F +M +P +L A A +SSL +GK+I
Sbjct: 529 KDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEI 588
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H F+IR + + +LV++Y+ C + YA++VF E+ DV++ +MI + G
Sbjct: 589 HGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHG 648
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
++A+ +F M + G+ PDH++F +L AC H V + D M KY + P EHY C
Sbjct: 649 KQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYAC 708
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
++ L R G +E F+ MP P + + CR + L A +L EL P
Sbjct: 709 VVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDN 768
Query: 680 PFQFKITTNRF 690
P + + +N F
Sbjct: 769 PGNYVLVSNVF 779
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 179/635 (28%), Positives = 313/635 (49%), Gaps = 34/635 (5%)
Query: 45 YAHLFQLCASSKA-IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
YAH+ Q + A + + L +++ + +F N + Y + +L DA LFDEM
Sbjct: 37 YAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEM 96
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+ + S+ + Y+++ + L L + G N + +L+ +
Sbjct: 97 PQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCW 156
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
LH + K G + + ++L+DAY + AR +FDDI K+ VSW +V Y
Sbjct: 157 TLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENC 216
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+E++ +F +M +P NFT + AL +C L + G +HG +K ++ D V
Sbjct: 217 FYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGI 276
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L E+Y K G + DA+ L ++ + ++I W+ +++ YA S R +EA +LF
Sbjct: 277 ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLF---------- 326
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
MR+T+ + T +L CA + +GK++H +
Sbjct: 327 ---------------------LRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ +SN+FVSNA++D+Y KCG + ++ F ++ R D V+WN ++ GY + G E AM
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTIIVGYVQLGDGERAM 424
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F+ M + + +P++ T+ ++L A A++++LE G QIH I+ Y + V +L+++Y
Sbjct: 425 NLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMY 484
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC + A F + + D + N+MI G+ + EAL +F +M+ KP+ +TF
Sbjct: 485 AKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFV 544
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC + G + F+SM Y I P +EHY CM+ L R G E + + +
Sbjct: 545 GVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAY 604
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P+V + R + C + LG A+ + E+ P
Sbjct: 605 QPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEP 639
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ D + Y+ + + AS A+ ++ S + + N I+ Y KCG +
Sbjct: 431 LEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRI 490
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+DAR FD+M +RD SWNAM+ Y+ +G L LF M H+ N++T+ VL +
Sbjct: 491 NDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSAC 550
Query: 154 A 154
+
Sbjct: 551 S 551
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 179/588 (30%), Positives = 296/588 (50%), Gaps = 40/588 (6%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+WN M+ T NGF +TL ++ M HSGV N +TY +L++ A + LHG +
Sbjct: 13 TWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGHV 72
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K GF + ++++LVD Y KC + AR++FD++ ++ VSWN +V Y + +A+
Sbjct: 73 LKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQAL 132
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYE----GMQIHGVIIKIDFEGDDVVLG-S 284
+ +M P TF + L S L S +E G IH +IK+ +V L S
Sbjct: 133 SLLKEMWVLGFEPTASTFVSILSGYSNLDS-FEFHLLGKSIHCCLIKLGIVYLEVSLANS 191
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MYV+ +++AR + D DE++IISWT+++ GY G EA LF +M ++V
Sbjct: 192 LMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSV--- 248
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+DFV + +++ C + ++ + VH + +
Sbjct: 249 ---------------GIDFVVFLN-------------LISGCIQVRDLLLASSVHSLVLK 280
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ V N L+ MY KCGNL SAR F + + +SW +++ GY G EA+
Sbjct: 281 CGCNEKDPVENLLITMYAKCGNLTSARRIF-DLIIEKSMLSWTSMIAGYVHLGHPGEALD 339
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M + + RP+ T T+++ACA++ SL G++I ++ N E + + +L+ +Y+
Sbjct: 340 LFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYS 399
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK-EGIKPDHITFH 582
KC + A VF+ + D+ + SMI + + G EA+ +F M EGI PD I +
Sbjct: 400 KCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYT 459
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+ LAC H G V+ L++F SM+ +GI P +EH C+I L R G + + + MP
Sbjct: 460 SVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPP 519
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + + CR +G LGE A RL + +P + + + N +
Sbjct: 520 DVQAQVWGPLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLY 567
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 214/458 (46%), Gaps = 38/458 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L + CA+ +I L +++ F+ ++ Y KC ++ AR +FDEMP
Sbjct: 49 YPLLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMP 108
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELG-V 161
+R SWNAM+ AY++ + L L +M G T+ ++L S+ + E +
Sbjct: 109 QRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLL 168
Query: 162 SKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
K +H ++K G V L +SL+ Y + +M +AR++FD + K+ +SW ++ Y+
Sbjct: 169 GKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYV 228
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ EA +F++M + + F N + C + +H +++K D
Sbjct: 229 KIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDP 288
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V L MY KCG L AR + D E++++SWTS+++GY G EA +LF M +
Sbjct: 289 VENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTD 348
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ A TL +++ CA L + +G+E+
Sbjct: 349 IRPNGA-------------------------------TLATVVSACADLGSLSIGQEIEE 377
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+I N S+ V +L+ MY KCG++ AR F +++ +D W +++ YA G
Sbjct: 378 YIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTD-KDLTVWTSMINSYAIHGMGN 436
Query: 461 EAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQG 496
EA++ F +M P + ++ AC++ +E+G
Sbjct: 437 EAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEG 474
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 153/298 (51%), Gaps = 5/298 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L N + Y + +D+AR +FD M E+ SW M+G Y + G LF M H
Sbjct: 186 VSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQH 245
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
V + + + N++ + +L ++ +H L++K G +E+ L+ Y KC +T
Sbjct: 246 QSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTS 305
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD I K+ +SW ++ Y+ G+ EA+ +F +M+R DIRP T A + AC+
Sbjct: 306 ARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACAD 365
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G +I I E D V SL MY KCG + AR + ++ ++++ WTS+
Sbjct: 366 LGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSM 425
Query: 317 VSGYAISGRIREARELFNEMPER-----NVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++ YAI G EA LF++M + I + ++ + S L +E L + M+K
Sbjct: 426 INSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQK 483
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 186/663 (28%), Positives = 320/663 (48%), Gaps = 51/663 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVT---FYPTPP--VFLLNRAIECYGKCGNL 93
P+ +++ + F S + EAR L + L+ F PT P ++ + Y G+L
Sbjct: 26 PIHFTVTS--FHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSL 83
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR-- 151
A F +P + +WNA+L G + + + M GV+ + TY VL+
Sbjct: 84 QHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKAC 143
Query: 152 SSAEELELG--VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
SS L+LG V + +HG NV ++ +++D + KC + DARRMF+++ +++
Sbjct: 144 SSLHALQLGRWVHETMHGKTK-----ANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDL 198
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SW ++ + G EA+++F KM E + P + A+ L AC L + GM +
Sbjct: 199 ASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVC 258
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
++ FE D V ++ +MY KCG P EA
Sbjct: 259 AVRSGFESDLYVSNAVIDMYCKCG----------DP---------------------LEA 287
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+F+ M +V+SW+ ++AGY+++ L++E+ M + + +L L
Sbjct: 288 HRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKL 347
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+K GKE+H F+ + S++ V +AL+ MY CG+++ A F + + +D + WN++
Sbjct: 348 ELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIF-ECTSDKDIMVWNSM 406
Query: 450 LTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+ GY G E A +F + W E RP+ T ++L C + +L QGK+IH +V ++
Sbjct: 407 IVGYNLVGDFESAFFTFRRI-WGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSG 465
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+NV +L+++Y+KC LE +VFK+ +V N+MI + +G + L +
Sbjct: 466 LGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYE 525
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK+EG +P+ +TF +L AC H G + ++SM YGI P +EHY CM+ L R
Sbjct: 526 QMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRA 585
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G + F+ RMP P + + CR + L E A R+ +L + + +
Sbjct: 586 GDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLS 645
Query: 688 NRF 690
N +
Sbjct: 646 NLY 648
>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
Length = 836
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/587 (27%), Positives = 290/587 (49%), Gaps = 37/587 (6%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
S + R +E L+ V + N + Y KCG+L+ AR +F+ + +D SW+ M
Sbjct: 232 SSTLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTM 291
Query: 115 LGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
+ AY Q+G +E++ M + + V N +T+ V+ + ++ Q+HG +V G
Sbjct: 292 ISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLG 351
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+V + S+LV Y KC + DA++ FD ++ ++ + WN ++ Y G+ ++ + +
Sbjct: 352 LETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYE 411
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
M D+ P T+ N L ACS + +G ++H I+ E D + +L +Y+KC
Sbjct: 412 AM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCR 468
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
L + A ++F M +++VI WN M+ GY
Sbjct: 469 SL-------------------------------KSACQVFEAMGKKDVIPWNFMMVGYID 497
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
EAL M + + + VT L C+ + +I+ G +V I + +++
Sbjct: 498 HDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVT 557
Query: 414 SNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QW 471
ALL+MY CG+L +A R++ + +RRD V W A++ YA+ G+ EEA+ + M
Sbjct: 558 DTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSE 617
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
E +P+ T+ ++L+AC+++ ++ +G++IH + E++V + +L+ +Y +C L A
Sbjct: 618 EIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDA 677
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
F + + DV M+ F H+ ALE+ M+ G+ PD +TF +L AC HE
Sbjct: 678 WSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHE 737
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
G+++ F SM Y + P +HY CM+ L R G + E + +
Sbjct: 738 GSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQ 784
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 260/512 (50%), Gaps = 39/512 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V+ N I+ +GK GN +R +FD M +++ SW+ M+GAY QNG LF M
Sbjct: 58 VYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMES 117
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ N +T +VL + + + EL K++H I F ++ L++SLV+ Y KC D
Sbjct: 118 EGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPAD 177
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+ +FD + K+ V+WN + + G + + +M + ++P T+A+ S
Sbjct: 178 AKAVFDSMARKDIVTWNAMAGASVHNGQSHK---LLREMDLQGVKPNATTYASITRGSST 234
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ Q ++ + V +L +Y KCG LE AR + ++ + +++ISW+++
Sbjct: 235 LTGCRAMEQ---RLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTM 291
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+S Y SGR EA E++ M + NA
Sbjct: 292 ISAYNQSGRHSEAIEIYRLMESETSVEPNA------------------------------ 321
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT ++ C G ++ G +VHG + +++ V +AL+ MY KCG+L A+ F +
Sbjct: 322 VTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDR 381
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQG 496
+ ++RD + WN +L+ Y+ RG ++ + ++ M E P+ T+ +L AC+ + L QG
Sbjct: 382 V-EKRDVLCWNFMLSAYSERGSPQQVIEAYEAMDVE--PNAVTYTNVLIACSAMEDLAQG 438
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+++H ++ + E ++ AL+ +Y KC L+ A +VF+ DVI N M++G+ +
Sbjct: 439 QKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDH 498
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ EAL ++ M + G++ +++TF L AC
Sbjct: 499 DCDTEALRLYARMHEAGVEANNVTFANALKAC 530
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 219/448 (48%), Gaps = 38/448 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C ++ ++ LV+ V + + ++ Y KCG+L+DA+ FD + +RD W
Sbjct: 331 CTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCW 390
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ML AY++ G P + +E + M+ V N +TY NVL + + +L +++H IV
Sbjct: 391 NFMLSAYSERGSPQQVIEAYEAMD---VEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVS 447
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G ++ +E++L+ Y KC + A ++F+ + K+ + WN ++ Y+ EA+ +
Sbjct: 448 SGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRL 507
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ +M + N TFANAL ACS + G ++ +I FE D V +L MY
Sbjct: 508 YARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAA 567
Query: 292 CGRLEDARGLLD--QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
CG LE A+ + + + R+++ WT++++ YA +GR EA L+ M +
Sbjct: 568 CGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEI-------- 619
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ VT +L+ C+ L I G+++H +
Sbjct: 620 -----------------------KPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEEL 656
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++ V N+LL MY +CG+LR A F ++ RD SW ++ +A G S A+ EM
Sbjct: 657 DVAVQNSLLSMYARCGSLRDAWSCFAKI-HNRDVFSWTGMVAAFAHHGHSARALELVREM 715
Query: 470 QW-ETRPSKFTFETLLAACANISSLEQG 496
+ P TF+++L AC++ SLE+G
Sbjct: 716 ELCGVSPDAVTFQSVLHACSHEGSLERG 743
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 201/426 (47%), Gaps = 43/426 (10%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
L+ G+ NV + L+ +GK +R +FD +Q KN SW++++ Y G+
Sbjct: 45 LYARFTGTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGH 104
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA ++F +M E IRP T + L ACS+ + G ++H I +F+ D + S
Sbjct: 105 RNEAFLLFERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTS 164
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KCG DA+ + D ++I++W ++ +G ++ +L EM + V
Sbjct: 165 LVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNG---QSHKLLREMDLQGVKPN 221
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
A TR G S + + + +
Sbjct: 222 ATTYASITR----------------------------------GSSTLTGCRAMEQRLLA 247
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ Y S++ V NAL+++Y KCG+L AR F ++ +R+D +SW+ +++ Y + G+ EA+
Sbjct: 248 SGYMSHVPVQNALVNVYAKCGDLEGARKVFNRL-ERKDVISWSTMISAYNQSGRHSEAIE 306
Query: 465 SFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ M+ ET P+ TF ++ AC + +G Q+H ++ E +V ALV++Y
Sbjct: 307 IYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMY 366
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC LE A + F DV+ N M+ + ++ +E + M ++P+ +T+
Sbjct: 367 VKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMD---VEPNAVTYT 423
Query: 583 GILLAC 588
+L+AC
Sbjct: 424 NVLIAC 429
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + C+S I+E RK+ S L V + N + Y +CG+L DA F ++
Sbjct: 626 YTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIH 685
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
RD SW M+ A+ +G R LEL +M GVS + +T+ +VL + + E L
Sbjct: 686 NRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSL 740
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 293/578 (50%), Gaps = 33/578 (5%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+G + + G F ++ G + T V+R+ + L + + +H ++ K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+ + ++LVD Y KC + DAR +FD +Q ++ V+W V++ Y G E++V+F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
KM E + P +FAC+ L + ++ I I + F+ D ++ ++ +MY KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+E AR + D+ +E+N+ISW+++++ Y G+ R+A +LF M ++
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLP---------- 230
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
D++TL +L C+ L ++MG+ +H +++ + FV
Sbjct: 231 ---------------------DKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFV 269
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
AL+DMY KC + AR F +M + RD V+W ++ GYA G + E++ F +M+ E
Sbjct: 270 CAALVDMYGKCREIEDARFLFDKMPE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEG 328
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P K T++ ACA + ++ + + I ++ R ++++V+ A+++++ KC C+E A
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAR 388
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+F +VI ++MI + ++ +GR+AL++F +M + GI P+ IT +L AC H G
Sbjct: 389 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAG 448
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
V+ L+FF M Y + ++HY C++ L R G + E + M +
Sbjct: 449 LVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAF 508
Query: 653 FDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR + L E AA L EL P P + + +N +
Sbjct: 509 LGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIY 546
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 233/459 (50%), Gaps = 34/459 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y+L + + C K + R + + F F+ ++ Y KC ++DAR
Sbjct: 28 PDNYTL-PFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD+M ERD +W M+G Y + G +L LF M GV +++ V+ + A+
Sbjct: 87 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 146
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ ++ + I ++ F +VIL ++++D Y KC + AR +FD ++ KN +SW+ ++
Sbjct: 147 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 206
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G G++A+ +F ML + P T A+ L+ACS L + G IH ++ K + D
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLD 266
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L +MY KC +EDAR L D+ ER++++WT ++ GYA G E+ LF++M E
Sbjct: 267 HFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMRE 326
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V+ D+V + ++ CA L + + +
Sbjct: 327 EGVVP-------------------------------DKVAMVTVVFACAKLGAMHKARTI 355
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+I R + ++ + A++DM+ KCG + SAR F +M + ++ +SW+A++ Y GQ
Sbjct: 356 DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE-KNVISWSAMIAAYGYHGQ 414
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+A+ F M + P+K T +LL AC++ +E+G
Sbjct: 415 GRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 453
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 204/693 (29%), Positives = 320/693 (46%), Gaps = 112/693 (16%)
Query: 39 PVSYSLYAHLFQLCASSKAIVE-------ARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
P+ Y + L L ++S ++ E + + N+ Y + +F N+ + K G
Sbjct: 72 PLGYYISTALSVLLSASPSLNEDSDDTGVQQVVMHNIADSYQS--IFHSNQLLNGLSKSG 129
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQ-----------NGFP---------------- 124
+DDAR LFD+M +RD +WN M+ Y NGF
Sbjct: 130 QIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCR 189
Query: 125 -GRTLE---LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
GR E LF M G +Q T ++LR + + + +HG +VK GF NV +
Sbjct: 190 FGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYV 249
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQ-NK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ LVD Y KC +++A +F + NK N V W +V Y G+ +A+ F M E
Sbjct: 250 VAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTE 309
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ FTF + L ACS +S+ G Q+HG I++ F + V +L +MY KCG L A
Sbjct: 310 GVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSA 369
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ +L+ ++ +++SW S++ G G EA LF +M RN+
Sbjct: 370 KRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNM----------------- 412
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
ID T +LN C + I GK VH + + + + VSNAL+
Sbjct: 413 --------------KIDHYTFPSVLNCCI-VGRID-GKSVHCLVIKTGFENYKLVSNALV 456
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
DMY K +L A F +M + +D +SW +++TGY + G EE++ +F +M+ P +
Sbjct: 457 DMYAKTEDLNCAYAVFEKMFE-KDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQ 515
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
F ++L+ACA ++ LE GKQ+H I+ ++ +LV +Y KC CL+ A +F
Sbjct: 516 FIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVS 575
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
DVI ++I+G+ N +GR++L+ F MKK
Sbjct: 576 MHVRDVITWTALIVGYARNGKGRDSLKYFQQMKK-------------------------- 609
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
YGI P EHY CMI L+ R G + E ++ +N+M P + + + CR
Sbjct: 610 ---------IYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACR 660
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+G LGE AA L EL P + + +N +
Sbjct: 661 VHGNLELGERAATNLFELEPMNAMPYVMLSNMY 693
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 236/470 (50%), Gaps = 39/470 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ +P Y+L + + C++ I + + +V V+++ ++ Y KC ++
Sbjct: 205 LEGQKPSQYTL-GSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHI 263
Query: 94 DDARGLFDEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+A LF + G W AM+ Y QNG + +E F M+ GV +NQ T+ ++L
Sbjct: 264 SEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILT 323
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + +Q+HG IV+ GF N ++S+LVD Y KC + A+R+ +++++ + VS
Sbjct: 324 ACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVS 383
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ + G +EA+++F KM +++ ++TF + L C + +G +H ++I
Sbjct: 384 WNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLVI 441
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K FE +V +L +MY K L A + ++ E+++ISWTS+V+GY +G E+ +
Sbjct: 442 KTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLK 501
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
F + MR + DQ + IL+ CA L+
Sbjct: 502 TFCD-------------------------------MRISGVSPDQFIVASILSACAELTL 530
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ GK+VH + S++ V+N+L+ MY KCG L A F M RD ++W A++
Sbjct: 531 LEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSM-HVRDVITWTALIV 589
Query: 452 GYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQI 499
GYAR G+ +++ F +M+ + P + ++ + L++ K+I
Sbjct: 590 GYARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEI 639
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 174/596 (29%), Positives = 307/596 (51%), Gaps = 39/596 (6%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
L RA+ + G ++DA LFDEM + D WN M+ +T G L+L+ M SGV
Sbjct: 63 LTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGV 122
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
A+ TY V++S L K++H +++K F +V + +SL+ Y K DA +
Sbjct: 123 KADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEK 182
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+++ ++ VSWN ++ YL +G ++++F +ML+ +P F+ +AL ACS + S
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYS 242
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
P G ++H ++ E DV++ TSI+
Sbjct: 243 PNMGKELHCHAVRSRIETGDVMV------------------------------MTSILDM 272
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQVT 378
Y+ G + A +F + +RN+++WN ++ Y R+ +A L F + + D +T
Sbjct: 273 YSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVIT 332
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L +L CA L G+ +HG+ R + +I + AL+DMY + G L+SA + F +++
Sbjct: 333 LINLLPACAILE----GRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIA 388
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQG 496
++ + +SWN+++ Y + G++ A+ F ++ W++ P T ++L A A SL +G
Sbjct: 389 EK-NLISWNSIIAAYVQNGKNYSALELFQKL-WDSSLLPDSTTIASILPAYAESLSLSEG 446
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+QIH +++++ Y N + +LV +Y C LE A + F DV+ NS+I+ + +
Sbjct: 447 RQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVH 506
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
GR ++ +F M + P+ TF +L AC G V ++F+SM+ +YGI P +EH
Sbjct: 507 GFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 566
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
Y M+ L R G + F+ MPF PT + + + R + T+ E+AA ++
Sbjct: 567 YGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQI 622
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 230/457 (50%), Gaps = 43/457 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + ++ E +K+ + ++ V++ N I Y K G DA +F+EMP
Sbjct: 129 YPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMP 188
Query: 105 ERDGGSWNAMLGAY--TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
ERD SWN+M+ Y ++GF R+L LF +M G ++ + + L + + +
Sbjct: 189 ERDIVSWNSMISGYLALEDGF--RSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMG 246
Query: 163 KQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
K+LH V+ R G+V++ +S++D Y K ++ A R+F I +N V+WNV++ Y
Sbjct: 247 KELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYAR 306
Query: 222 AGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+A + F KM ++ ++P T N L AC+ L EG IHG ++ F V
Sbjct: 307 NSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIV 362
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +L +MY + G+L+ A + D+ E+N+ISW SI++ Y +G+ A ELF ++
Sbjct: 363 LDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKL---- 418
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
W++ L D T+ IL A + G+++H
Sbjct: 419 ---WDSSLLP------------------------DSTTIASILPAYAESLSLSEGRQIHA 451
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+I ++ Y SN + N+L+ MY CG+L AR F + +D VSWN+++ YA G
Sbjct: 452 YIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHV-LLKDVVSWNSIIMAYAVHGFGR 510
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
++ FSEM + P+K TF +LLAAC+ +++G
Sbjct: 511 ISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEG 547
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T V ++ ++ Y K G + A +F + +R+ +WN ++G Y +N F
Sbjct: 260 TGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQK 319
Query: 134 MN-HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M+ +G+ + IT N+L + A + + +HG ++RGF +++L+++L+D YG+
Sbjct: 320 MSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWG 375
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ A +FD I KN +SWN I+ Y+ G A+ +F K+ + P + T A+ L
Sbjct: 376 QLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILP 435
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
A + S EG QIH I+K + + ++L SL MY CG LEDAR + ++++S
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVS 495
Query: 313 WTSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
W SI+ YA+ G R + LF+EM + N ++ ++LA + S + E ++ M+
Sbjct: 496 WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMK 555
Query: 369 K 369
+
Sbjct: 556 R 556
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 112/209 (53%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
AI+E R + + P + L I+ YG+ G L A +FD + E++ SWN+++
Sbjct: 341 AILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIA 400
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
AY QNG LELF + S + + T A++L + AE L L +Q+H IVK +
Sbjct: 401 AYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGS 460
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N I+ +SLV Y C + DAR+ F+ + K+ VSWN I+ Y V G G+ +V +F +M+
Sbjct: 461 NTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMI 520
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQ 265
+ P TFA+ L ACS EG +
Sbjct: 521 ASKVDPNKSTFASLLAACSISGMVDEGWE 549
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 193/681 (28%), Positives = 328/681 (48%), Gaps = 37/681 (5%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
+++S+ S + + L IS + +Y+ + LF+ C + L ++V
Sbjct: 19 SLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYT-FPSLFKACTNLNLFSHGLSLHQSVVV 77
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+ ++ + I Y K G + R +FD M +R+ W ++G+Y++ G +
Sbjct: 78 NGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSM 137
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M SG+ +T ++L ++ L + LH LI+ GF ++ L +S+V+ YGK
Sbjct: 138 FKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMYGK 194
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + DARR+F+ I ++ VSWN ++ Y G +E + + M EDI+P TF +A
Sbjct: 195 CGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSA 254
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L A + G +HG+++K D V +L +Y++C L+
Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD-------------- 300
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
A ++F E++V+ W AM++G ++ +AL + M ++
Sbjct: 301 -----------------PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIES 343
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
TL L CA L +G +HG++ R +I N+L+ MY KC L+ +
Sbjct: 344 NVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQS 403
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
F +M ++ D VSWNA++ G+A+ G + + F+EM+ RP T +LL AC +
Sbjct: 404 CSIFNKMVEK-DLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGS 462
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+L QGK IH FV+R+ ++ ALV++Y KC LE A + F D++ +++
Sbjct: 463 AGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTL 522
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I+G+ N +G AL + G++P+H+ F +L AC H G + L ++SM +
Sbjct: 523 IVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFR 582
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
+ P LEH C++ L R G + E F M P++ +L + D CR NG LG+ A
Sbjct: 583 MSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIA 642
Query: 670 RRLNELNPWAPFQFKITTNRF 690
R + EL P P F N +
Sbjct: 643 RDMFELKPVDPGNFVQLANSY 663
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 207/456 (45%), Gaps = 38/456 (8%)
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
S+N +V R G + + + M + + +TF + AC+ L+ G+ +H +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+ D + SL Y K G + R + D +RN++ WT+I+ Y+ G I A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +M E + Q T +L++ G+S
Sbjct: 136 SMFKQMRESGI----------------------------------QPTSVTLLSLLPGIS 161
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ + +H I + + S++ +SN++++MY KCG + AR F + RD VSWN++L
Sbjct: 162 KLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGC-RDIVSWNSLL 220
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+ Y++ G +EE + M+ E +P K TF + L+A A L GK +H ++++
Sbjct: 221 SAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLN 280
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
I+ ALV +Y +C CL+ A +VFK ++ DV++ +MI G N+ +AL VF M
Sbjct: 281 IDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQM 340
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ +KP T L AC G + + + GI+ + ++ +Y +
Sbjct: 341 IESNVKPSTATLASGLAACAQLGCCDIGASIHGYV-LRQGIMLDIPAQNSLVTMYAKCNK 399
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+++ N+M V I KNGY + G
Sbjct: 400 LQQSCSIFNKMVEKDLVSW-NAIVAGHAKNGYLSKG 434
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/677 (25%), Positives = 321/677 (47%), Gaps = 37/677 (5%)
Query: 2 AGNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEA 61
A ++ N + + + S K LK++ + + + C +S
Sbjct: 317 AAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYG 376
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
+ L ++++ + + + + Y K G+L+ A +F +MP R+ SWN+M+ Y N
Sbjct: 377 KSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHN 436
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
G +++ F DM G + I+ N+L + ++ + + K H ++ F N+ +
Sbjct: 437 GLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNIS 496
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++L+ Y C ++ + ++F + +NA+SWN ++ + G+ K+AV + KM +E +
Sbjct: 497 NALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKME 556
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
T + + C + +GM +HG IK F D ++ +L MY CG
Sbjct: 557 LDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGD------- 609
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
I + LF MP R+++SWNA++ GY L E +
Sbjct: 610 ------------------------INAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVM 645
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
M + + + VTL +L C L + GK +H F R + +L+ MY
Sbjct: 646 ASFCQMIREGQKPNYVTLLNLLPSCRTLLQ---GKSIHAFAVRTGVIVETPIITSLISMY 702
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
+ N+ S I+ ++M + D WNA+++ Y + ++E++T F E+ P TF
Sbjct: 703 ARFENINSF-IFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITF 761
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+L++AC +SSL + +VI+ ++ ++V AL++++ +C + A ++F+ SS
Sbjct: 762 LSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSS 821
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D + ++MI G+ + AL + M+ G+KPD IT+ +L AC H G +
Sbjct: 822 KDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMI 881
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F+SM + G+ ++EHY CM+ L R G + E DFV ++P P+V +L + C +G
Sbjct: 882 FNSM-VEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHG 940
Query: 661 YATLGEWAARRLNELNP 677
LGE + L EL+P
Sbjct: 941 NVKLGEKISSLLFELDP 957
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/545 (26%), Positives = 254/545 (46%), Gaps = 37/545 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y K G + AR + D++ + D +WNA++ Y+ NGF E+ +N G+ N
Sbjct: 197 VDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNV 256
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+A+++ L + K +HG +VK GF + L +L+ Y + AR +FD
Sbjct: 257 STFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDS 316
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
KN V WN ++ Y EA MF +ML+ +++P TF + + C ++ + G
Sbjct: 317 AAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYG 376
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+H ++K + V +L MY K G L A + Q RN++SW S++SGY +
Sbjct: 377 KSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHN 436
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G LW+ ++D M+ D D +++ IL
Sbjct: 437 G-------------------------------LWEASMDAFCDMQFEGFDPDAISIVNIL 465
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
+ C+ L I +GK H F R ++ SN+ +SNALL Y CG L S+ F +M R+
Sbjct: 466 SACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMP-LRNA 524
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCF 502
+SWN +++G G +++A+ +MQ E T +++ C +L QG +H +
Sbjct: 525 ISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGY 584
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
I+ + +V AL+ +Y C + +F+ ++ N++I G+ + E
Sbjct: 585 AIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEV 644
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ F M +EG KP+++T +L +C L + + + G+I + +I
Sbjct: 645 MASFCQMIREGQKPNYVTLLNLLPSC----RTLLQGKSIHAFAVRTGVIVETPIITSLIS 700
Query: 623 LYCRY 627
+Y R+
Sbjct: 701 MYARF 705
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 265/567 (46%), Gaps = 38/567 (6%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
+K K S H S+ V+ + LF LC + I + L S L+ +++
Sbjct: 40 NKQFIKNTSKHNSSNPKVTS--FLRLFDLC---RNIENLKPLGSVLIVRDLMRDEYVVAE 94
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
I G + A F+ + + N M+ +G L ++L G ++
Sbjct: 95 FIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSD 154
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
T+ V+++ + +++ +H ++++ F N++++++LVD Y K M AR + D
Sbjct: 155 DFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLD 214
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I + V+WN ++ Y + G KE + ++ ++P TFA+ + C+ +
Sbjct: 215 KISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDI 274
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G IHG ++K F D+ + +L MY G L AR L D E+N++ W S++S YA
Sbjct: 275 GKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQ 334
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+ + EA ++F +M + N+ + VT I
Sbjct: 335 NQKSSEAFKMFQQMLKANM-------------------------------QPNVVTFVSI 363
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ C + GK +H + + S + V+ ALL MY K G+L SA FYQM RR+
Sbjct: 364 IPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMP-RRN 422
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHC 501
+SWN++++GY G E +M +F +MQ+E P + +L+AC+ + ++ GK H
Sbjct: 423 LLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHA 482
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
F R ++ N+ AL+ Y+ C L + ++F++ + I N++I G HN ++
Sbjct: 483 FSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKK 542
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLAC 588
A+ + M++E ++ D +T I+ C
Sbjct: 543 AVALLHKMQQEKMELDLVTLISIIPIC 569
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/556 (24%), Positives = 249/556 (44%), Gaps = 36/556 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A + LC K + + + +V + FL I Y GNL AR LFD
Sbjct: 257 STFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDS 316
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
E++ WN+M+ AY QN ++F M + + N +T+ +++
Sbjct: 317 AAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYG 376
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K LH ++K + + ++L+ Y K + A +F + +N +SWN ++ Y
Sbjct: 377 KSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHN 436
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G + ++ F M E P + N L ACS L + G H + +F+ + +
Sbjct: 437 GLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNIS 496
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L Y CG+L + L + RN ISW +++SG +G ++A L ++M + +
Sbjct: 497 NALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKM- 555
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
++D VTL I+ +C + G +HG+
Sbjct: 556 ------------------------------ELDLVTLISIIPICRVAENLIQGMTLHGYA 585
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ ++ ++ + NAL+ MY CG++ + + F M R VSWNA++TGY E
Sbjct: 586 IKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPW-RSIVSWNALITGYRFHYLQNEV 644
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
M SF +M E +P+ T LL +C +L QGK IH F +R + +L+ +
Sbjct: 645 MASFCQMIREGQKPNYVTLLNLLPSC---RTLLQGKSIHAFAVRTGVIVETPIITSLISM 701
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y + + I +F+ D+ + N+++ + + +E++ F + ++PD+ITF
Sbjct: 702 YARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITF 761
Query: 582 HGILLACIHEGNVKLA 597
++ AC+ ++ L+
Sbjct: 762 LSLISACVQLSSLNLS 777
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 168/363 (46%), Gaps = 7/363 (1%)
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS----GRIREARELFNEMPER 339
S ++ C +E+ + L R+++ +V+ + IS G A F + +
Sbjct: 59 SFLRLFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKP 118
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V N M+ L+++ L R D T ++ C L + + + VH
Sbjct: 119 SVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVH 178
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ R + N+ + AL+D Y K G + AR+ ++SQ D V+WNA+++GY+ G
Sbjct: 179 CIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQ-PDLVTWNALISGYSLNGFD 237
Query: 460 EEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
+E ++ + +P+ TF +++ C + L+ GK IH FV+++ + + AL
Sbjct: 238 KEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPAL 297
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ +Y L A +F ++ +V+I NSMI + N++ EA ++F M K ++P+
Sbjct: 298 ISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNV 357
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
+TF I+ C + N + + KY + QL ++ +Y + G + +
Sbjct: 358 VTFVSIIPCCENSANFWYG-KSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFY 416
Query: 639 RMP 641
+MP
Sbjct: 417 QMP 419
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 152/337 (45%), Gaps = 45/337 (13%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L L S + +++ + + + V ++ I Y + N++ LF+
Sbjct: 660 YVTLLNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 719
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ D WNA++ Y Q ++ F ++ H+ V + IT+ +++ + + L +S
Sbjct: 720 KEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNS 779
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+ ++++GF ++++ ++L+D + +C ++ A+++F+ + +K+AVSW+ ++ Y + G+
Sbjct: 780 VMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGD 839
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK------------ 272
+ A+ + +M ++P T+A+ L ACS +G I +++
Sbjct: 840 SEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYAC 899
Query: 273 -IDFEGDDVVLGSLTEMY---------------------------VKCGRLEDARGLLDQ 304
+D G G L E Y VK G E LL +
Sbjct: 900 MVDLLGRT---GQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLG--EKISSLLFE 954
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
D +N S+ + + YA +GR +A + ++M ER +
Sbjct: 955 LDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQL 991
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 193/681 (28%), Positives = 327/681 (48%), Gaps = 37/681 (5%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
+++S+ S + + L IS + +Y+ + LF+ C + L ++V
Sbjct: 19 SLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYT-FPSLFKACTNLNLFSHGLSLHQSVVV 77
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+ ++ + I Y K G + R +FD M +R+ W ++G+Y++ G +
Sbjct: 78 NGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSM 137
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M SG+ +T ++L ++ L + LH LI+ GF ++ L +S+V+ YGK
Sbjct: 138 FKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMYGK 194
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + DARR+F I ++ VSWN ++ Y G +E + + M EDI+P TF +A
Sbjct: 195 CGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSA 254
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L A + G +HG+++K D V +L +Y++C L+
Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD-------------- 300
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
A ++F E++V+ W AM++G ++ +AL + M ++
Sbjct: 301 -----------------PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIES 343
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
TL L CA L +G +HG++ R +I N+L+ MY KC L+ +
Sbjct: 344 NVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQS 403
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
F +M ++ D VSWNA++ G+A+ G + + F+EM+ RP T +LL AC +
Sbjct: 404 CSIFNKMVEK-DLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGS 462
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+L QGK IH FV+R+ ++ ALV++Y KC LE A + F D++ +++
Sbjct: 463 AGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTL 522
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I+G+ N +G AL + G++P+H+ F +L AC H G + L ++SM +
Sbjct: 523 IVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFR 582
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
+ P LEH C++ L R G + E F M P++ +L + D CR NG LG+ A
Sbjct: 583 MSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIA 642
Query: 670 RRLNELNPWAPFQFKITTNRF 690
R + EL P P F N +
Sbjct: 643 RDMFELKPVDPGNFVQLANSY 663
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 207/456 (45%), Gaps = 38/456 (8%)
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
S+N +V R G + + + M + + +TF + AC+ L+ G+ +H +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+ D + SL Y K G + R + D +RN++ WT+I+ Y+ G I A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +M E + Q T +L++ G+S
Sbjct: 136 SMFKQMRESGI----------------------------------QPTSVTLLSLLPGIS 161
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ + +H I + + S++ +SN++++MY KCG + AR F Q RD VSWN++L
Sbjct: 162 KLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLF-QSIDCRDIVSWNSLL 220
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+ Y++ G +EE + M+ E +P K TF + L+A A L GK +H ++++
Sbjct: 221 SAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLN 280
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
I+ ALV +Y +C CL+ A +VFK ++ DV++ +MI G N+ +AL VF M
Sbjct: 281 IDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQM 340
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ +KP T L AC G + + + GI+ + ++ +Y +
Sbjct: 341 IESNVKPSTATLASGLAACAQLGCCDIGASIHGYV-LRQGIMLDIPAQNSLVTMYAKCNK 399
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+++ N+M V I KNGY + G
Sbjct: 400 LQQSCSIFNKMVEKDLVSW-NAIVAGHAKNGYLSKG 434
>gi|326512500|dbj|BAJ99605.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 621
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 270/536 (50%), Gaps = 34/536 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S A+ + R + V P +FL N I Y + + DAR +FDEMPER SW A
Sbjct: 98 SCGAVADVRGVHGVAVRSPDGPGIFLANNLITSYARFHEIPDARKVFDEMPERTVVSWTA 157
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ Y ++G G + LFLDM SG N +++ +L+S E+ + + +Q+H +VK G
Sbjct: 158 MMNGYQKSGNHGEVVRLFLDMIASGERGNSLSFVCLLKSCGEQCDGKLGQQVHCCVVKGG 217
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+ NVI++S++ Y +C + A MFD + +++ +SW ++ Y+ G G +A+ MF
Sbjct: 218 W-SNVIMDSAVAHFYAQCGDVDGASMMFDKMTSRDVISWTTMITAYVQHGRGDKALQMFP 276
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
M+ E P FT + L AC+ + G Q+HG ++K F+ D V +L MY +
Sbjct: 277 AMISEGFHPNEFTVCSILKACAEEKALRCGKQLHGALVKKLFKNDIHVGSALVTMYARNR 336
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
+ DA+ + D RN I+WTS++SGYA SG A LF +M R V
Sbjct: 337 EVSDAQAVFDVMPRRNTITWTSLISGYAQSGHAERAIMLFRQMKTRRV------------ 384
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
++ +T+ +L+ C L + +GKE+H + +N N+ +
Sbjct: 385 -------------------SVNNLTIVGLLSACGSLRSLCLGKELHAQVIKNSIQENLQI 425
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
+ L+ Y KCG A +M RD V+W A+++GY G S EA+ S +M W+
Sbjct: 426 GSTLVWCYCKCGEYTYAARILEEMPD-RDAVAWTAMISGYNSVGHSAEALKSLDDMLWDG 484
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P+ +T+ + L ACA + +L+ G++IH V + NV +L+++Y +C ++ A
Sbjct: 485 VTPNTYTYSSALKACAKLEALQDGRRIHGVVNKTPAFSNVFVGSSLIDMYMRCGKVDEAR 544
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
RVF +++ +I GF N EA + LM+++G D +L +C
Sbjct: 545 RVFSALPEHNLVTWKVIITGFAQNGLCEEAFKYMYLMQQQGYDADDFMLSKVLTSC 600
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 168/342 (49%), Gaps = 31/342 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA KA+ ++L LV + + + + Y + + DA+ +FD MP R+
Sbjct: 293 ILKACAEEKALRCGKQLHGALVKKLFKNDIHVGSALVTMYARNREVSDAQAVFDVMPRRN 352
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W +++ Y Q+G R + LF M VS N +T +L + L + K+LH
Sbjct: 353 TITWTSLISGYAQSGHAERAIMLFRQMKTRRVSVNNLTIVGLLSACGSLRSLCLGKELHA 412
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++K N+ + S+LV Y KC T A R+ +++ +++AV+W ++ Y G+ E
Sbjct: 413 QVIKNSIQENLQIGSTLVWCYCKCGEYTYAARILEEMPDRDAVAWTAMISGYNSVGHSAE 472
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ ML + + P +T+++AL AC+ L + +G +IHGV+ K + V SL +
Sbjct: 473 ALKSLDDMLWDGVTPNTYTYSSALKACAKLEALQDGRRIHGVVNKTPAFSNVFVGSSLID 532
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY++CG++++AR + E N+++W I++G+A +G
Sbjct: 533 MYMRCGKVDEARRVFSALPEHNLVTWKVIITGFAQNG----------------------- 569
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
L +EA +++LM++ D D L +L C L
Sbjct: 570 --------LCEEAFKYMYLMQQQGYDADDFMLSKVLTSCGDL 603
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D TL L C +++++ VHG R+ IF++N L+ Y + + AR F
Sbjct: 88 DAETLASWLRSCGAVADVR---GVHGVAVRSPDGPGIFLANNLITSYARFHEIPDARKVF 144
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M +R VSW A++ GY + G E + F +M R + +F LL +C
Sbjct: 145 DEMPER-TVVSWTAMMNGYQKSGNHGEVVRLFLDMIASGERGNSLSFVCLLKSCGEQCDG 203
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ G+Q+HC V++ + NV+ A+ Y +C ++ A +F + +S DVI +MI +
Sbjct: 204 KLGQQVHCCVVKGGWS-NVIMDSAVAHFYAQCGDVDGASMMFDKMTSRDVISWTTMITAY 262
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ RG +AL++F M EG P+ T IL AC E ++ Q ++ K
Sbjct: 263 VQHGRGDKALQMFPAMISEGFHPNEFTVCSILKACAEEKALRCGKQLHGAL-VKKLFKND 321
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+ ++ +Y R + + + + MP T+ I +GYA G
Sbjct: 322 IHVGSALVTMYARNREVSDAQAVFDVMPRRNTITWTSLI------SGYAQSGH 368
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C S +++ ++L + ++ + + + + CY KCG A + +EMP+RD
Sbjct: 394 LLSACGSLRSLCLGKELHAQVIKNSIQENLQIGSTLVWCYCKCGEYTYAARILEEMPDRD 453
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W AM+ Y G L+ DM GV+ N TY++ L++ A+ L +++HG
Sbjct: 454 AVAWTAMISGYNSVGHSAEALKSLDDMLWDGVTPNTYTYSSALKACAKLEALQDGRRIHG 513
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++ K NV + SSL+D Y +C + +ARR+F + N V+W VI+ + G +E
Sbjct: 514 VVNKTPAFSNVFVGSSLIDMYMRCGKVDEARRVFSALPEHNLVTWKVIITGFAQNGLCEE 573
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
A + M ++ +F + L +C L + + G
Sbjct: 574 AFKYMYLMQQQGYDADDFMLSKVLTSCGDLQWKSDSISFSG 614
>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 680
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 190/670 (28%), Positives = 306/670 (45%), Gaps = 58/670 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA+ +A + + L F VFL N I Y + N+ DA +FDEM +R+ +W
Sbjct: 13 CATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTW 72
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
M+ A+T G P + L+ DM S + N Y+ VL++ +LG+ K + I +
Sbjct: 73 TTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLIQERIYE 131
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG-------- 223
+ IL +SL+D + KC + DA +F +I +WN+IV Y AG
Sbjct: 132 DKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKL 191
Query: 224 ---------------------NGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPY 261
NG + + F M+ + I+ +FTF AL + +
Sbjct: 192 FHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLF 251
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H + K+ +E L +L +MY C L +A L DQ
Sbjct: 252 IGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSS-------------- 297
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
FN N+ WN+ML+GY + + AL+ + + + +D T G
Sbjct: 298 -----------FNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGG 346
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
L VC L ++G ++HG I Y + V + L+D+Y K N+ A F+++ R+
Sbjct: 347 ALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLP-RK 405
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
D ++W+ ++ G A+ G + A + F M + F T+L C+N++SL GKQ+H
Sbjct: 406 DIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVH 465
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+++ YE+ +L+++Y+KC +E A+ +F D++ +I+G N +
Sbjct: 466 ALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAA 525
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EA+ F M + GI P+ ITF G+L AC + G V+ A F+SM+ YG+ P LEHY CM
Sbjct: 526 EAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCM 585
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ L G +E E + MPF P R + C L A L E P P
Sbjct: 586 VDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDP 645
Query: 681 FQFKITTNRF 690
+ +N +
Sbjct: 646 STYVTLSNAY 655
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 184/434 (42%), Gaps = 77/434 (17%)
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
A L C+ + + G IH + K D + +L MY + + DA + D+ +
Sbjct: 7 AKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTD 66
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
RNI++WT++VS + GR EA L+N+MP+ + GY S
Sbjct: 67 RNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSETPN------GYMYS------------- 107
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+L C + ++ +GK + I+ + ++ + N+L+DM+ KCG+L
Sbjct: 108 -------------AVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGSL 154
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWET-------- 473
A F+ +S R +WN +++GY++ G EA F M W +
Sbjct: 155 NDAVEVFHNIS-RATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFADN 213
Query: 474 -----------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ FTF L A L GKQ+H +V + YE +
Sbjct: 214 GSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTLS 273
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIIC------NSMILGFCHNERGREALEVFGLMK 570
AL+++Y+ C L A+++F + SS + I NSM+ G+ N + AL + +
Sbjct: 274 ALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEIH 333
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLEHY--ECMIKLYCRY 627
G D TF G L CI+ + ++ LQ + C Y +L++ ++ LY +
Sbjct: 334 CSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGY----ELDYVVGSILVDLYAKL 389
Query: 628 GYMKELEDFVNRMP 641
+ + +R+P
Sbjct: 390 ANIDDALAIFHRLP 403
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/654 (25%), Positives = 317/654 (48%), Gaps = 34/654 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + + +A + LC S + V ++ S ++ V + N I +G G + DA
Sbjct: 142 PCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEK 201
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD M E D SWNAM+ Y+ G + +F DM H G+ + T +++ A
Sbjct: 202 LFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDH 261
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+H L ++ +V + ++LV+ Y ++DA +F ++ ++ +SWN ++
Sbjct: 262 FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISS 321
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ N +A+ ++ + P + TF++AL ACS + +G +H +++++ + +
Sbjct: 322 YVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN 381
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+V SL MY KC +E +A ++F MP
Sbjct: 382 LLVGNSLITMYGKCNSME-------------------------------DAEKVFQSMPT 410
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI-KMGKE 397
+++S+N ++ GY +A+ MR + +T+ I A +++ G+
Sbjct: 411 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 470
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H +I R + S+ +V+N+L+ MY KCGNL S+ F ++ + + VSWNA++ + G
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAANVQLG 529
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EEA+ F +MQ + + L++CA+++SLE+G Q+H +++ + +
Sbjct: 530 HGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 589
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
A +++Y KC ++ ++V + + N++I G+ +EA E F M G KP
Sbjct: 590 AAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKP 649
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D++TF +L AC H G V + +++SM +G+ P ++H C++ L R G E E F
Sbjct: 650 DYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKF 709
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + R + R + +G A++L EL+P+ + + +N +
Sbjct: 710 IEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLY 763
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 229/485 (47%), Gaps = 40/485 (8%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL-----RSSAEEL 157
M +R +W + + G G E+ M GV + A+++ R E +
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
G + +H L + G GNV + ++L+ YG +++DA+R+F ++ +N VSW ++
Sbjct: 61 ACGAA--IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMV 118
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G +EA+ + +M R+ + FA + C L + G+Q+ +I +
Sbjct: 119 ALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 178
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
V SL M+ GR+ DA L D+ +E + ISW +++S Y+ G + +F++
Sbjct: 179 QVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD-- 236
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
MR D TL +++VCA G
Sbjct: 237 -----------------------------MRHHGLRPDATTLCSLMSVCASSDHFSHGSG 267
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H R+ S++ V NAL++MY G L A F+ MS RRD +SWN +++ Y +
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMS-RRDLISWNTMISSYVQNC 326
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
S +A+ + ++ P+ TF + L AC++ +L GK +H V++ + N++
Sbjct: 327 NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN 386
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+L+ +Y KC +E A +VF+ + D++ N +I G+ E G +A++VF M+ GIKP
Sbjct: 387 SLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKP 446
Query: 577 DHITF 581
++IT
Sbjct: 447 NYITM 451
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 251/571 (43%), Gaps = 37/571 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + YG G + DA+ LF EMPER+ SW A++ A + NG+ L + M
Sbjct: 79 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 138
Query: 137 SGVSANQITYANVLRSSAEELELGVSK-QLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
GV N +A V+ S LE V Q+ ++ G V + +SL+ +G +
Sbjct: 139 DGVPCNANAFATVV-SLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 197
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
DA ++FD ++ + +SWN ++ Y G + ++F M +RP T + + C+
Sbjct: 198 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 257
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
G IH + ++ + V+ +L MY G+L DA L R++ISW +
Sbjct: 258 SSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNT 317
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S Y +N S +A+ + L +F T + +
Sbjct: 318 MISSYV-----------------QNCNSTDAL-----------KTLGQLF---HTNESPN 346
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T L C+ + GK VH + + N+ V N+L+ MY KC ++ A F
Sbjct: 347 HLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQ 406
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
M D VS+N ++ GYA +AM FS M+ +P+ T + + A+ + L
Sbjct: 407 SMPT-HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLH 465
Query: 495 Q-GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ +H ++IR + + +L+ +Y KC LE + +F ++ +++ N++I
Sbjct: 466 NYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAAN 525
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
G EAL++F M+ G K D + L +C +++ +Q + K G+
Sbjct: 526 VQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH-GLGMKSGLDSD 584
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
+ +Y + G M E+ V P
Sbjct: 585 SYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 615
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 206/428 (48%), Gaps = 11/428 (2%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
N + S + S KT+ ++E ++ ++ C+S A+++ + + + ++
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQ 375
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+ + N I YGKC +++DA +F MP D S+N ++G Y + +++
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQV 435
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELEL-GVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
F M +G+ N IT N+ S A +L + LH I++ GF + + +SL+ Y
Sbjct: 436 FSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 495
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + + +F+ I NKN VSWN I+ + G+G+EA+ +F M + A
Sbjct: 496 KCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAE 555
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L +C+ L+S EGMQ+HG+ +K + D V+ + +MY KCG++++ ++ R
Sbjct: 556 CLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 615
Query: 310 IISWTSIVSGYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVF 365
W +++SGYA G +EA E F +M + + +++ A+L+ + + L + +D+
Sbjct: 616 QQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYN 675
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGK--EVHGFIHRNDYSSNIFVSNALLDMYRK 423
M + V+ G+ VC ++G+ E FI N + +LL R
Sbjct: 676 SMASSFG----VSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRT 731
Query: 424 CGNLRSAR 431
NL R
Sbjct: 732 HKNLEIGR 739
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 3/339 (0%)
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
N+ T+++ Y G + +A+ LF EMPERNV+SW A++ + + +EAL MR
Sbjct: 78 NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 137
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ + ++++C L G +V + + + + V+N+L+ M+ G +
Sbjct: 138 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 197
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAAC 487
A F +M + D +SWNA+++ Y+ +G + FS+M+ RP T +L++ C
Sbjct: 198 DAEKLFDRM-EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVC 256
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
A+ G IH +R+ + +V ALV +Y+ L A +F S D+I N
Sbjct: 257 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 316
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI + N +AL+ G + P+H+TF L AC G + + + ++ +
Sbjct: 317 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGAL-IDGKMVHAIVLQ 375
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ L +I +Y + M++ E MP + V
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIV 414
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA--GLSE-I 392
M +R +W ++G R A + + MR+ + L ++ C G E I
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G +H HR N+++ ALL +Y G + A+ F++M + R+ VSW A++
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE-RNVVSWTALMVA 119
Query: 453 YARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ G EEA+ ++ +M+ + P + F T+++ C ++ + G Q+ VI + +
Sbjct: 120 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 179
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V +L+ ++ + A ++F D I N+MI + H + VF M+
Sbjct: 180 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 239
Query: 572 EGIKPDHITFHGILLAC 588
G++PD T ++ C
Sbjct: 240 HGLRPDATTLCSLMSVC 256
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 192/656 (29%), Positives = 311/656 (47%), Gaps = 39/656 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P SY+ Y + AS+ A+ +++ S+ V + + N + Y K G++DDAR
Sbjct: 318 PNSYT-YVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 376
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--EE 156
+FD M ERD SW M+G Q+G LFL M +G N TY ++L +SA
Sbjct: 377 VFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST 436
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L K +H + GF ++ + ++L+ Y KC + DAR +FD + +++ +SWN ++
Sbjct: 437 SALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMM 496
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
G G EA +F +M +E + P + T+ + L + ++H ++
Sbjct: 497 GGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V + MY++CG ++DAR LF+++
Sbjct: 557 SDFRVGSAFIHMYIRCGSIDDAR-------------------------------LLFDKL 585
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
R+V +WNAM+ G + +EAL M++ D T IL+ ++ K
Sbjct: 586 SVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVK 645
Query: 397 EVHGFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
EVH H D ++ V NAL+ Y KCGN++ A+ F M +R + +W ++ G A+
Sbjct: 646 EVHS--HATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVER-NVTTWTMMIGGLAQ 702
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G +A + F +M E P T+ ++L+ACA+ +LE K++H + ++
Sbjct: 703 HGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRV 762
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
ALV +Y KC ++ A VF + DV MI G + RG EAL+ F MK EG
Sbjct: 763 GNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGF 822
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
KP+ ++ +L AC H G V + F SM YGI P +EHY CM+ L R G ++E E
Sbjct: 823 KPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAE 882
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F+ MP P + C G + E+AA+ +L P + + + +N +
Sbjct: 883 LFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIY 938
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 161/550 (29%), Positives = 266/550 (48%), Gaps = 35/550 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y ++ Q C + I+ A+++ ++ +++ N+ + Y +CG L AR +FD++
Sbjct: 121 YVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLL 180
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+++ W M+G Y + G + ++ M N+ITY ++L++ + L K+
Sbjct: 181 KKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKK 240
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H I++ GF +V +E++LV+ Y KC + DA+ +FD + +N +SW V++ G
Sbjct: 241 IHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGR 300
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G+EA +F +M RE P ++T+ + L A + + ++H + D V +
Sbjct: 301 GQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNA 360
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY K G ++DAR + D ER+I SWT ++ G A GR +EA LF +M
Sbjct: 361 LVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQR------ 414
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGKEVHGFI 402
N L T L ILN A S ++ K VH
Sbjct: 415 NGCLPNLTTYL-------------------------SILNASAIASTSALEWVKVVHKHA 449
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ S++ + NAL+ MY KCG++ AR+ F M RD +SWNA++ G A+ G EA
Sbjct: 450 EEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCD-RDVISWNAMMGGLAQNGCGHEA 508
Query: 463 MTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
T F +MQ E P T+ +LL + +LE ++H + + A + +
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHM 568
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y +C ++ A +F + S V N+MI G GREAL +F M++EG PD TF
Sbjct: 569 YIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTF 628
Query: 582 HGILLACIHE 591
IL A + E
Sbjct: 629 INILSANVDE 638
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 247/501 (49%), Gaps = 42/501 (8%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G++ + +Y N+L+ ++ ++ ++KQ+H I+K G N+ + + L+ Y +C + A
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD + KN W ++ Y G+ ++A+ ++ KM +E +P T+ + L AC
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCP 232
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G +IH II+ F+ D V +L MYVKCG +EDA+ + D+ ERN+ISWT ++
Sbjct: 233 VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G A GR +EA LF +M I +
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIP-------------------------------NSY 321
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T ILN A ++ KEVH + ++ V NAL+ MY K G++ AR+ F M
Sbjct: 322 TYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM 381
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL--AACANISSLE 494
++ RD SW ++ G A+ G+ +EA + F +MQ P+ T+ ++L +A A+ S+LE
Sbjct: 382 TE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
K +H + ++ AL+ +Y KC ++ A VF DVI N+M+ G
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLA 500
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR---CKYGII 611
N G EA VF M++EG+ PD T+ L+ ++ AL++ + + + G+I
Sbjct: 501 QNGCGHEAFTVFLQMQQEGLVPDSTTY----LSLLNTHGSTDALEWVNEVHKHAVETGLI 556
Query: 612 PQLEHYECMIKLYCRYGYMKE 632
I +Y R G + +
Sbjct: 557 SDFRVGSAFIHMYIRCGSIDD 577
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
F++ +L C + KQ+H +I++ E N+ L+ VY +C L+ A +VF +
Sbjct: 119 FSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDK 178
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
++ I +MI G+ +A+ V+ M++E +P+ IT+ IL AC N+K
Sbjct: 179 LLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWG 238
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ + + G + ++ +Y + G +++ + ++M
Sbjct: 239 KKIHAHI-IQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 320/641 (49%), Gaps = 36/641 (5%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S L + L + S+K++ + + ++T V L I Y C + AR +F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 101 DEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELE 158
+ R D WN+++ Y++N TLE+F + N S + T+ NV+++
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + +H L+VK G+ +V++ SSLV Y K + ++ ++FD++ ++ SWN ++
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ +G ++A+ +F +M P + + A+ ACS L G +IH +K FE D
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ V +L +MY KC LE ARE+F +MP
Sbjct: 243 EYVNSALVDMYGKCDCLE-------------------------------VAREVFQKMPR 271
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+++++WN+M+ GY K ++ + M Q TL IL C+ + GK +
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG++ R+ +++I+V+ +L+D+Y KCG A F + +Q+ SWN +++ Y G
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVGN 390
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+A+ + +M +P TF ++L AC+ +++LE+GKQIH + + E + + A
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y+KC + A R+F DV+ MI + + + REAL F M+K G+KPD
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+T +L AC H G + L+FF MR KYGI P +EHY CMI + R G + E + +
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Query: 638 NRMP-FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ P + +L +F C + +LG+ AR L E P
Sbjct: 571 QQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYP 611
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/588 (31%), Positives = 303/588 (51%), Gaps = 38/588 (6%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE--ELELGVSKQLHGL 168
WN ++ P L LF M + + T+ V ++ E ELG S +HG
Sbjct: 94 WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGAS--IHGC 151
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK---NAVSWNVIVRRYLVAGNG 225
+++ GF NV + ++++ YGKC + AR++FD++ + ++V+WN IV Y
Sbjct: 152 VIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211
Query: 226 KEAVVMFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
AV +F +M + I P N L C +L G Q+HG ++ D V +
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----N 340
L +MY KCG++EDA + ++ +++++W ++V+GY+ +GR +A LF +M E +
Sbjct: 272 LVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 331
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH- 399
V++W+++++GY + EA+D M + VTL +L+ CA + + GKE H
Sbjct: 332 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 391
Query: 400 ---GFI---HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTG 452
FI ND + ++ V NAL+DMY KC +L AR F ++ + RD V+W ++ G
Sbjct: 392 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 451
Query: 453 YARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-Y 508
YA+ G + A+ FSEM P+ FT +L ACA +++L+ GKQIH +V+R
Sbjct: 452 YAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRI 511
Query: 509 EINVV-CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +V+ L+++Y+K ++ A VF S + + S++ G+ + R +A VF
Sbjct: 512 DSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFD 571
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M+KE + D ITF +L AC H G +G+ P +EHY CM+ L R
Sbjct: 572 EMRKEALVLDGITFLVVLYACSHSG-------------MDFGVDPGVEHYACMVDLLGRA 618
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
G + E +N MP PT + + CR + L E+AA++L EL
Sbjct: 619 GRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLEL 666
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 234/494 (47%), Gaps = 94/494 (19%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER-- 106
F+L AS V ESN VF+ N I YGKC + AR +FDE+ R
Sbjct: 142 FELGASIHGCVIRLGFESN---------VFVCNAVISMYGKCKAVVHARKVFDELCYRGI 192
Query: 107 -DGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGV-SK 163
D +WN+++ Y+ P + LF +M G+ + + N+L L LG+ +
Sbjct: 193 CDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCG-YLGLGLCGR 251
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HG V+ G +V + ++LVD Y KC M DA ++F+ ++ K+ V+WN +V Y G
Sbjct: 252 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 311
Query: 224 NGKEAVVMFFKMLREDI-----------------------------------RPLNFTFA 248
++A+ +F KM E I RP T
Sbjct: 312 RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLM 371
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEG-------DDVVLGSLTEMYVKCGRLEDARGL 301
+ L AC+ + + G + H +K +G D V+ +L +MY KC LE AR +
Sbjct: 372 SLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAM 431
Query: 302 LDQ--PDERNIISWTSIVSGYAISGRIREARELFNEMPE-RNVISWNAMLAGYTRSLLWK 358
D+ P +R++++WT ++ GYA G A +LF+EM + N I N
Sbjct: 432 FDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPN------------- 478
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNA 416
DF T+ +L CA L+ +K GK++H ++ R S +FV+N
Sbjct: 479 ---DF--------------TISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANC 521
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP- 475
L+DMY K G++ +A++ F MS +R+ VSW ++LTGY G+SE+A F EM+ E
Sbjct: 522 LIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVL 580
Query: 476 SKFTFETLLAACAN 489
TF +L AC++
Sbjct: 581 DGITFLVVLYACSH 594
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 160/346 (46%), Gaps = 41/346 (11%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFY-------PTPPVFLLNRAIECYGKCGNLDDARGLF 100
L CAS A++ ++ V F T + ++N I+ Y KC +L+ AR +F
Sbjct: 373 LLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMF 432
Query: 101 DEM--PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH--SGVSANQITYANVLRSSAEE 156
DE+ +RD +W M+G Y Q+G L+LF +M + + N T + VL + A
Sbjct: 433 DEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARL 492
Query: 157 LELGVSKQLHGLIVKRGFCGNVIL--ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L KQ+H +++R + +L + L+D Y K + A+ +FD + +NAVSW
Sbjct: 493 AALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTS 552
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y + G ++A +F +M +E + TF L+ACS + GM D
Sbjct: 553 LLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS-----HSGM---------D 598
Query: 275 FEGDDVV--LGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARE 331
F D V + ++ + GRL +A L+ D P E + W +++S + RI E
Sbjct: 599 FGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLS----ACRIHSNEE 654
Query: 332 LFN-------EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
L E+ N ++ + Y + WK+ +LM++T
Sbjct: 655 LAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRT 700
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 302/617 (48%), Gaps = 37/617 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPE--RDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
+ N I Y KCG LD A +F+ + + RD SWN+++ QNG L LF M
Sbjct: 199 TLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGM 258
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+G N T VL+ AE L + ++LH ++K G N+ + LV Y K +
Sbjct: 259 QSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRV 317
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A R+F I K+ +SWN ++ Y+ EA+ F +ML+ +P + + A
Sbjct: 318 DSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSAL 377
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
LS G + H IK D V +L +MY+KCG +E + + + R+ ISWT
Sbjct: 378 GHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWT 437
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+I++ +A S R EA E+ E+ + ++ +
Sbjct: 438 TILACFAQSSRHSEALEMILELQKEGIM-------------------------------V 466
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D + +G IL C GL I + K+VH + RN ++ + N L+D+Y +CG + +
Sbjct: 467 DSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHS-LNL 524
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSL 493
+Q +++D VSW +++ G+ A+ F+EMQ +P ++L A A +SSL
Sbjct: 525 FQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSL 584
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+GKQ+H F+IR + I +LV++Y+ C + YAIRVF+ + DV++ +MI
Sbjct: 585 TKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINAT 644
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G++A+++F M + G+ PDH++F +L AC H V+ + D M KY + P
Sbjct: 645 GMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPW 704
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY C++ + R G +E +F+ MP +P + + CR + L AA +L
Sbjct: 705 QEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLL 764
Query: 674 ELNPWAPFQFKITTNRF 690
EL P P + + +N F
Sbjct: 765 ELEPDNPGNYILVSNVF 781
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 268/564 (47%), Gaps = 43/564 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGK 89
L + P + Y + L A+ +A E R++ ++ VT FL + + YG+
Sbjct: 48 QLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGR 107
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS---GVSANQITY 146
CG +DDAR LF+ MP R SWNA++GAY +G G + ++ M S G + + T
Sbjct: 108 CGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTL 167
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A+VL++ E + ++HGL VK G + ++ ++L+ Y KC ++ A R+F+ +Q
Sbjct: 168 ASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQ 227
Query: 207 --KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
++ SWN +V + G EA+ +F M ++T L C+ L G
Sbjct: 228 DARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGR 287
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++H ++K E ++ +L MY K GR++ A + Q E++ ISW S++S Y +
Sbjct: 288 ELHAALLKCGSE-LNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNS 346
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
EA + F EM + +A + + +L
Sbjct: 347 FYAEAIDFFGEMLQHGFQPDHACVVSLSSAL----------------------------- 377
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
LS + G+E H + + +++ V N L+DMY KCG++ + F M RD +
Sbjct: 378 --GHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGI-RDHI 434
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SW +L +A+ + EA+ E+Q E ++L C + S+ KQ+HC+
Sbjct: 435 SWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYA 494
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
IRN ++++ L+++Y +C ++++ +F+ D++ SMI +N R A+
Sbjct: 495 IRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAV 553
Query: 564 EVFGLMKKEGIKPDHITFHGILLA 587
+F M+K I+PD + IL+A
Sbjct: 554 FLFTEMQKANIQPDSVALVSILVA 577
>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Cucumis sativus]
Length = 688
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/670 (28%), Positives = 306/670 (45%), Gaps = 58/670 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA+ +A + + L F VFL N I Y + N+ DA +FDEM +R+ +W
Sbjct: 13 CATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTW 72
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
M+ A+T G P + L+ DM S + N Y+ VL++ +LG+ K + I +
Sbjct: 73 TTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGKLIQERIYE 131
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG-------- 223
+ IL +SL+D + KC + DA +F +I +WN+IV Y AG
Sbjct: 132 DKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKL 191
Query: 224 ---------------------NGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPY 261
NG + + F M+ + I+ +FTF AL + +
Sbjct: 192 FHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLF 251
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H + K+ +E L +L +MY C L +A L DQ
Sbjct: 252 IGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSS-------------- 297
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
FN N+ WN+ML+GY + + AL+ + + + +D T G
Sbjct: 298 -----------FNASISDNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGG 346
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
L VC L ++G ++HG I Y + V + L+D+Y K N+ A F+++ R+
Sbjct: 347 ALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRL-PRK 405
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
D ++W+ ++ G A+ G + A + F M + F T+L C+N++SL GKQ+H
Sbjct: 406 DIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVH 465
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+++ YE+ +L+++Y+KC +E A+ +F D++ +I+G N +
Sbjct: 466 ALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAA 525
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EA+ F M + GI P+ ITF G+L AC + G V+ A F+SM+ YG+ P LEHY CM
Sbjct: 526 EAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCM 585
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ L G +E E + MPF P R + C L A L E P P
Sbjct: 586 VDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDP 645
Query: 681 FQFKITTNRF 690
+ +N +
Sbjct: 646 STYVTLSNAY 655
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 77/435 (17%)
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
A L C+ + + G IH + K D + +L MY + + DA + D+
Sbjct: 6 IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+RNI++WT++VS + GR EA L+N+MP+ + GY S
Sbjct: 66 DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSETPN------GYMYS------------ 107
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+L C + ++ +GK + I+ + ++ + N+L+DM+ KCG+
Sbjct: 108 --------------AVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKCGS 153
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWET------- 473
L A F+ +S R +WN +++GY++ G EA F M W +
Sbjct: 154 LNDAVEVFHNIS-RATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFAD 212
Query: 474 ------------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
+ FTF L A L GKQ+H +V + YE +
Sbjct: 213 NGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCFTL 272
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIIC------NSMILGFCHNERGREALEVFGLM 569
AL+++Y+ C L A+++F + SS + I NSM+ G+ N + AL + +
Sbjct: 273 SALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLLSEI 332
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLEHY--ECMIKLYCR 626
G D TF G L CI+ + ++ LQ + C Y +L++ ++ LY +
Sbjct: 333 HCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGY----ELDYVVGSILVDLYAK 388
Query: 627 YGYMKELEDFVNRMP 641
+ + +R+P
Sbjct: 389 LANIDDALAIFHRLP 403
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/654 (25%), Positives = 317/654 (48%), Gaps = 34/654 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + + +A + LC S + V ++ S ++ V + N I +G G + DA
Sbjct: 444 PCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEK 503
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD M E D SWNAM+ Y+ G + +F DM H G+ + T +++ A
Sbjct: 504 LFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDH 563
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+H L ++ +V + ++LV+ Y ++DA +F ++ ++ +SWN ++
Sbjct: 564 FSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISS 623
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ N +A+ ++ + P + TF++AL ACS + +G +H +++++ + +
Sbjct: 624 YVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN 683
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+V SL MY KC +E +A ++F MP
Sbjct: 684 LLVGNSLITMYGKCNSME-------------------------------DAEKVFQSMPT 712
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI-KMGKE 397
+++S+N ++ GY +A+ MR + +T+ I A +++ G+
Sbjct: 713 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 772
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H +I R + S+ +V+N+L+ MY KCGNL S+ F ++ + + VSWNA++ + G
Sbjct: 773 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAANVQLG 831
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EEA+ F +MQ + + L++CA+++SLE+G Q+H +++ + +
Sbjct: 832 HGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 891
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
A +++Y KC ++ ++V + + N++I G+ +EA E F M G KP
Sbjct: 892 AAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKP 951
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D++TF +L AC H G V + +++SM +G+ P ++H C++ L R G E E F
Sbjct: 952 DYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKF 1011
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + R + R + +G A++L EL+P+ + + +N +
Sbjct: 1012 IEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLY 1065
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 234/489 (47%), Gaps = 40/489 (8%)
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL-----RSS 153
LFDEM +R +W + + G G+ E+ M GV + A+++ R
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E + G + +H L + G GNV + ++L+ YG +++DA+R+F ++ +N VSW
Sbjct: 359 DEGIACGAA--IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWT 416
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ G +EA+ + +M R+ + FA + C L + G+Q+ +I
Sbjct: 417 ALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 476
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ V SL M+ GR+ DA L D+ +E + ISW +++S Y+ G + +F
Sbjct: 477 GLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVF 536
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
++ MR D TL +++VCA
Sbjct: 537 SD-------------------------------MRHHGLRPDATTLCSLMSVCASSDHFS 565
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G +H R+ S++ V NAL++MY G L A F+ MS RRD +SWN +++ Y
Sbjct: 566 HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMS-RRDLISWNTMISSY 624
Query: 454 ARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
+ S +A+ + ++ P+ TF + L AC++ +L GK +H V++ + N+
Sbjct: 625 VQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 684
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+ +L+ +Y KC +E A +VF+ + D++ N +I G+ E G +A++VF M+
Sbjct: 685 LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA 744
Query: 573 GIKPDHITF 581
GIKP++IT
Sbjct: 745 GIKPNYITM 753
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/571 (24%), Positives = 251/571 (43%), Gaps = 37/571 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + YG G + DA+ LF EMPER+ SW A++ A + NG+ L + M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 137 SGVSANQITYANVLRSSAEELELGVSK-QLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
GV N +A V+ S LE V Q+ ++ G V + +SL+ +G +
Sbjct: 441 DGVPCNANAFATVV-SLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
DA ++FD ++ + +SWN ++ Y G + ++F M +RP T + + C+
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
G IH + ++ + V+ +L MY G+L DA L R++ISW +
Sbjct: 560 SSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNT 619
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S Y +N S +A+ + L +F T + +
Sbjct: 620 MISSYV-----------------QNCNSTDAL-----------KTLGQLF---HTNESPN 648
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T L C+ + GK VH + + N+ V N+L+ MY KC ++ A F
Sbjct: 649 HLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQ 708
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
M D VS+N ++ GYA +AM FS M+ +P+ T + + A+ + L
Sbjct: 709 SMPT-HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLH 767
Query: 495 Q-GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G+ +H ++IR + + +L+ +Y KC LE + +F ++ +++ N++I
Sbjct: 768 NYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAAN 827
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
G EAL++F M+ G K D + L +C +++ +Q + K G+
Sbjct: 828 VQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLH-GLGMKSGLDSD 886
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
+ +Y + G M E+ V P
Sbjct: 887 SYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 917
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 201/411 (48%), Gaps = 11/411 (2%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
KT+ ++E ++ ++ C+S A+++ + + + ++ + + N I Y
Sbjct: 635 KTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMY 694
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
GKC +++DA +F MP D S+N ++G Y + +++F M +G+ N IT
Sbjct: 695 GKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 754
Query: 148 NVLRSSAEELEL-GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
N+ S A +L + LH I++ GF + + +SL+ Y KC + + +F+ I N
Sbjct: 755 NIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 814
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
KN VSWN I+ + G+G+EA+ +F M + A L +C+ L+S EGMQ+
Sbjct: 815 KNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL 874
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+ +K + D V+ + +MY KCG++++ ++ R W +++SGYA G
Sbjct: 875 HGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYF 934
Query: 327 REARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+EA E F +M + + +++ A+L+ + + L + +D+ M + V+ G+
Sbjct: 935 KEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFG----VSPGIK 990
Query: 383 LNVCAGLSEIKMGK--EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
VC ++G+ E FI N + +LL R NL R
Sbjct: 991 HCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGR 1041
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 196/449 (43%), Gaps = 31/449 (6%)
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+FD++ ++ +W V + G+ +A F+MLR P
Sbjct: 298 HLFDEMADRTPSTWYTAVSGCVRCGSHGKA----FEMLRGMREP---------------G 338
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
P G + ++ + G D + ++ L GL+ N+ T+++
Sbjct: 339 VPLSGFALASLVTACERRGRDEGIACGAAIHA----LTHRAGLMG-----NVYIGTALLH 389
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
Y G + +A+ LF EMPERNV+SW A++ + + +EAL MR+ +
Sbjct: 390 LYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANA 449
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
++++C L G +V + + + + V+N+L+ M+ G + A F +M
Sbjct: 450 FATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRM- 508
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+ D +SWNA+++ Y+ +G + FS+M+ RP T +L++ CA+ G
Sbjct: 509 EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGS 568
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
IH +R+ + +V ALV +Y+ L A +F S D+I N+MI + N
Sbjct: 569 GIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNC 628
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+AL+ G + P+H+TF L AC G + + + ++ + + L
Sbjct: 629 NSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGAL-IDGKMVHAIVLQLSLQRNLLVG 687
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+I +Y + M++ E MP + V
Sbjct: 688 NSLITMYGKCNSMEDAEKVFQSMPTHDIV 716
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 287/533 (53%), Gaps = 18/533 (3%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
S+ LH ++K G G I + L++ Y K + A +MF++I + SW V++ +
Sbjct: 307 SEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFAR 364
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF-LSSPYEGMQIHGVIIKIDFEGDDV 280
G + + +F KM + + P FT + L +CS ++ G IHG I++ + D V
Sbjct: 365 IGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAV 424
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ S+ + YVKC A L E++ +SW ++S Y G ++++ +LF ++P ++
Sbjct: 425 LNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKD 484
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
SWN M+ G R+ + AL+ ++ M +++T + L + + LS + +GK++H
Sbjct: 485 AASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHT 544
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR--------------DKVSW 446
+ + + FV N+L+DMY KCG + A + F + Q + VSW
Sbjct: 545 QVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSW 604
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+++++GY + G+ E+A+ +FS M + KFT ++++ACA+ LE G+Q+H ++ +
Sbjct: 605 SSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK 664
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ ++V +++++Y KC L A +F ++ +V++ SMI G + +GREA+ +
Sbjct: 665 IGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRL 724
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F LM EGI P+ ++F G+L AC H G ++ ++F MR YGI P EH+ CM+ LY
Sbjct: 725 FELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYG 784
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
R G + E+++F++ + + R CR + +G W ++L EL P+
Sbjct: 785 RAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPF 837
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 222/464 (47%), Gaps = 80/464 (17%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y K NL+ A +F+E+P+ D SW ++ + + G L LF M GV
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 141 ANQITYANVLRSSAEEL-ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
NQ T + VL+S + + + + K +HG I++ G + +L +S++D Y KC A +
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN--------------- 244
+F + K+ VSWN+++ YL G+ +++V +F ++ +D N
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 245 ----------------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
TF+ AL S LS G QIH ++K+ D V SL +M
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM 564
Query: 289 YVKCGRLEDARGLLDQ-PDERNI--------------ISWTSIVSGYAISGRIREARELF 333
Y KCG +E A + P E ++ +SW+S+VSGY +GR +A + F
Sbjct: 565 YCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTF 624
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+ M V ++D+ TL +++ CA ++
Sbjct: 625 SFMICSQV-------------------------------EVDKFTLTSVVSACASAGVLE 653
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+G++VHG+I + + ++F+ ++++DMY KCG+L A + F Q ++ R+ V W ++++G
Sbjct: 654 LGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQ-AKDRNVVLWTSMISGC 712
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
A GQ EA+ F M E P++ +F +L AC++ LE+G
Sbjct: 713 ALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 756
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 21/310 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y + G++ + LF ++P +D SWN M+ +NG LEL M +G +
Sbjct: 458 NIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPA 517
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N++T++ L ++ LG+ KQ+H ++K G + + +SL+D Y KC M A +
Sbjct: 518 FNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVI 577
Query: 201 FDDIQNKN---------------AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
F + ++ +VSW+ +V Y+ G ++A+ F M+ + F
Sbjct: 578 FKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKF 637
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQ 304
T + + AC+ G Q+HG I KI G DV LG S+ +MYVKCG L DA + +Q
Sbjct: 638 TLTSVVSACASAGVLELGRQVHGYIQKIG-HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQ 696
Query: 305 PDERNIISWTSIVSGYAISGRIREARELF----NEMPERNVISWNAMLAGYTRSLLWKEA 360
+RN++ WTS++SG A+ G+ REA LF NE N +S+ +L + + L +E
Sbjct: 697 AKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 756
Query: 361 LDFVFLMRKT 370
+ LMR+
Sbjct: 757 CKYFRLMREV 766
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPER---------------DGGSWNAMLGAYTQNG 122
F+ N I+ Y KCG ++ A +F +P+ + SW++M+ Y QNG
Sbjct: 556 FVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNG 615
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
L+ F M S V ++ T +V+ + A L + +Q+HG I K G +V L S
Sbjct: 616 RFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGS 675
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
S++D Y KC + DA +F+ +++N V W ++ + G G+EAV +F M+ E I P
Sbjct: 676 SIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITP 735
Query: 243 LNFTFANALFACSFLSSPYEG 263
+F L ACS EG
Sbjct: 736 NEVSFVGVLTACSHAGLLEEG 756
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
KT S + S V + CAS+ + R++ + VFL + I+ Y
Sbjct: 622 KTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMY 681
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KCG+L+DA +F++ +R+ W +M+ +G + LF M + G++ N++++
Sbjct: 682 VKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFV 741
Query: 148 NVLR--SSAEELELG 160
VL S A LE G
Sbjct: 742 GVLTACSHAGLLEEG 756
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/643 (28%), Positives = 318/643 (49%), Gaps = 46/643 (7%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
++ L + C S+ +V + + +L+ + + L+N Y C ++ AR +FD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLT-RLYASCNEVELARHVFD 59
Query: 102 EMPER--DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
E+P + +W+ M+ AY N F + L+L+ M +SGV + TY VL++ A +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K +H + F ++ + ++LVD Y KC + A ++FD++ ++ V+WN ++ +
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALF-ACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + + +F M R D N + +F A + EG +HG ++ F D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VV T I+ YA S I AR +F+ +
Sbjct: 240 LVV-------------------------------KTGILDVYAKSKCIIYARRVFDLDFK 268
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVF--LMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+N ++W+AM+ GY + + KEA + F L+ + V +GLIL CA ++ G+
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ--RRDKVSWNAVLTGYA 454
VH + + + ++ V N ++ Y K G+L A F Q S+ +D +S+N+++TG
Sbjct: 329 CVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA---FRQFSEIGLKDVISYNSLITGCV 385
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ EE+ F EM+ RP T +L AC+++++L G H + + + Y +N
Sbjct: 386 VNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTS 445
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL+++YTKC L+ A RVF D++ N+M+ GF + G+EAL +F M++ G
Sbjct: 446 ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG 505
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ PD +T IL AC H G V Q F+SM R + +IP+++HY CM L R GY+ E
Sbjct: 506 VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDE 565
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
DFVN+MPF P + +L + C A LG ++++ L
Sbjct: 566 AYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL 608
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 226/468 (48%), Gaps = 43/468 (9%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y + + CA +AI + + + S++ +++ ++ Y KCG L+ A
Sbjct: 101 PTKYT-YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEEL 157
+FDEMP+RD +WNAM+ ++ + + LFLDM G+S N T + +
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L K +HG + GF ++++++ ++D Y K + ARR+FD KN V+W+ ++
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 218 RYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
Y+ KEA +FF+ML D + P+ L C+ G +H +K
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKA 337
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
F D V ++ Y K G L DA + +++IS+ S+++G ++ R E+ LF
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+E MR + D TL +L C+ L+ +
Sbjct: 398 HE-------------------------------MRTSGIRPDITTLLGVLTACSHLAALG 426
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G HG+ + Y+ N + NAL+DMY KCG L A+ F M +RD VSWN +L G+
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGF 485
Query: 454 ARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQI 499
G +EA++ F+ MQ ET P + T +L+AC++ +++GKQ+
Sbjct: 486 GIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K G+L DA F E+ +D S+N+++ N P + LF +M SG+
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T VL + + LG HG V G+ N + ++L+D Y KC + A+R+
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV 466
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ VSWN ++ + + G GKEA+ +F M + P T L ACS
Sbjct: 467 FDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLV 526
Query: 261 YEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD----QPDERNIISWT 314
EG Q+ + + DF + +T++ + G L++A ++ +PD R + +
Sbjct: 527 DEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLL 586
Query: 315 SIVSGYA---ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
S Y + + + + E E V+ N Y+ + W++A + +K
Sbjct: 587 SACWTYKNAELGNEVSKKMQSLGETTESLVLLSNT----YSAAERWEDAARIRMIQKK 640
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 282/557 (50%), Gaps = 44/557 (7%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
Y +L+ + ++ +HG ++K G N + S LV+ Y KC M DARR+FD++
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N V+W ++ ++ K A+ +F +ML P +T + L ACS L S G Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
H IIK + D V +L +Y KCGRLEDA + E+N+ISWTS VS A +G
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ LF EM ++ ++ TL L+
Sbjct: 250 PVKGLRLFVEMIAVDI-------------------------------KPNEFTLTSALSQ 278
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C + +++G +V+ + Y SN+ V N+LL +Y K G + A F +M V+
Sbjct: 279 CCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDD-ASMVT 337
Query: 446 WNAVLTGYARR-----------GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
WNA++ G+A+ + EA+ FS++ +P FT ++L+ C+ + ++
Sbjct: 338 WNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAI 397
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
EQG+QIH I+ + +V+ +L+ +Y+KC +E A + F E S+ +I SMI GF
Sbjct: 398 EQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGF 457
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ ++AL +F M G++P+ +TF G+L AC H G V AL +F+ M+ KY I P
Sbjct: 458 SQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPA 517
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++HYECM+ ++ R G +++ +F+ +M + P+ + C+ +G LG +AA +L
Sbjct: 518 MDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLL 577
Query: 674 ELNPWAPFQFKITTNRF 690
L P P + + N +
Sbjct: 578 SLKPKDPETYVLLLNMY 594
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 229/454 (50%), Gaps = 22/454 (4%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
Y L Q C +++ E + + +++ F+++ + Y KCGN++DAR +FD M
Sbjct: 69 FYVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNM 128
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
R+ +W ++ + QN P + +F +M ++G + T + VL + + L +
Sbjct: 129 LRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGD 188
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q H I+K + + S+L Y KC + DA + F I+ KN +SW V G
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNG 248
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ + +F +M+ DI+P FT +AL C + S G Q++ + IK +E + V
Sbjct: 249 APVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +Y+K G + +A L ++ D+ ++++W ++++G+A +M E +
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHA-------------QMMELTKDN 355
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+A G EAL + + D TL +L+VC+ + I+ G+++H
Sbjct: 356 LSACHRG-------SEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTI 408
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + S++ VS +L+ MY KCG++ A F +MS R ++W +++TG+++ G S++A+
Sbjct: 409 KTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMST-RTMIAWTSMITGFSQHGMSQQAL 467
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
F +M RP+ TF +L+AC++ + Q
Sbjct: 468 HIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQA 501
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/633 (30%), Positives = 315/633 (49%), Gaps = 46/633 (7%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
L SS A+ L + LV +F+ R + Y G++ +R FD++P++D +
Sbjct: 125 LFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYA 184
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
WN+M+ AY NG + F + S + + T+ VL++ ++ +++H
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 241
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K GF NV + +SL+ Y + AR +FDD+ ++ SWN ++ + GN +A+
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301
Query: 230 VMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +M E I+ +NF T + L C L M IH +IK E D V +L M
Sbjct: 302 DVLDEMRLEGIK-MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y K G LEDAR Q +++SW SI++ Y + A F +M L
Sbjct: 361 YAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM----------QL 410
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY- 407
G+ LL TL + ++ A + K + VHGFI R +
Sbjct: 411 NGFQPDLL---------------------TLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++ + NA++DMY K G L SA F ++ +D +SWN ++TGYA+ G + EA+ +
Sbjct: 450 MEDVVIGNAVVDMYAKLGLLDSAHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 468 EMQW--ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
M+ E P++ T+ ++L A A++ +L+QG +IH VI+ ++V L++VY KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR--EALEVFGLMKKEGIKPDHITFHG 583
L A+ +F + + N++I CH G + L++FG M EG+KPDH+TF
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIIS--CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVS 626
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V+ F M+ +YGI P L+HY CM+ L R GY++ DF+ MP
Sbjct: 627 LLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQ 685
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
P + + CR +G LG++A+ RL E++
Sbjct: 686 PDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YAH+ L K + R +++NL VF+ I+ YGKCG L DA LF ++P
Sbjct: 530 YAHVGALQQGMK--IHGRVIKTNLHL-----DVFVATCLIDVYGKCGRLVDAMSLFYQVP 582
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ +WNA++ + +G +TL+LF +M GV + +T+ ++L + + + K
Sbjct: 583 QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAG 223
L+ + G ++ +VD G+ + A D+ +A W ++ + G
Sbjct: 643 CFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 702
Query: 224 N---GKEAVVMFFKMLREDI 240
N GK A F++ +++
Sbjct: 703 NIELGKFASDRLFEVDSKNV 722
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/575 (32%), Positives = 309/575 (53%), Gaps = 47/575 (8%)
Query: 129 ELFLDMNHSGVSANQITYANVLRS-----SAEELELGVSKQLHGLIVKRGFCGNVI-LES 182
+LF+DMN S + + +Y +L S AE++ L +++HG ++ G ++ + +
Sbjct: 15 KLFMDMN-SMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVGIGN 73
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
LV+ Y KC + DARR+F + K++VSWN ++ G EAV + M R +I P
Sbjct: 74 GLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILP 133
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+FT ++L +C+ L G QIHG +K+ G D+
Sbjct: 134 GSFTLISSLSSCASLKWAKLGQQIHGESLKL---GIDL---------------------- 168
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM---LAGYTRSLLWKE 359
N+ ++++ YA +G + E R++F+ MPE + +SWN++ LA RSL E
Sbjct: 169 ------NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSL--PE 220
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A+ + + ++++T +L+ + LS ++GK++HG + + + NAL+
Sbjct: 221 AVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIA 280
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT-SFSEMQWETRPSKF 478
Y KCG + F +MS+RRD V+WN++++GY +A+ + +Q R F
Sbjct: 281 CYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 340
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
+ T+L+A A++++LE+G ++H +R C E +VV ALV++Y+KC L+YA+R F
Sbjct: 341 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 400
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLACIHEGNVKLA 597
+ NSMI G+ + +G EAL++F MK +G PDH+TF G+L AC H G ++
Sbjct: 401 PVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 460
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-C 656
+ F+SM YG+ P++EH+ CM L R G + +LEDF+++MP P V + R + C
Sbjct: 461 FKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACC 520
Query: 657 RKNG-YATLGEWAARRLNELNPWAPFQFKITTNRF 690
R NG A LG+ AA L +L P + + N +
Sbjct: 521 RANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 555
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 212/442 (47%), Gaps = 40/442 (9%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
V + + LV F V + N + Y KCG++ DAR +F M E+D SWN+M+
Sbjct: 55 VHGHVITTGLVDFM----VGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGL 110
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
QNG +E + M + T + L S A + +Q+HG +K G NV
Sbjct: 111 DQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 170
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG-KEAVVMFFKMLR 237
+ ++L+ Y + + + R++F + + VSWN I+ + EAV F LR
Sbjct: 171 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALR 230
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+ TF++ L A S LS G QIHG+ +K + + +L Y KCG ++
Sbjct: 231 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDG 290
Query: 298 ARGLLDQPDE-RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + E R+ ++W S++SGY + NE L
Sbjct: 291 CEKIFSRMSERRDDVTWNSMISGY-----------IHNE--------------------L 319
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+ALD V+ M +T + +D +L+ A ++ ++ G EVH R S++ V +A
Sbjct: 320 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSA 379
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETR 474
L+DMY KCG L A + F+ R+ SWN++++GYAR GQ EEA+ F+ M+ +T
Sbjct: 380 LVDMYSKCGRLDYA-LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTP 438
Query: 475 PSKFTFETLLAACANISSLEQG 496
P TF +L+AC++ LE+G
Sbjct: 439 PDHVTFVGVLSACSHAGLLEEG 460
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 205/459 (44%), Gaps = 51/459 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++L + L CAS K +++ + V + N + Y + G L++ R
Sbjct: 133 PGSFTLISSLSS-CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 191
Query: 99 LFDEMPERDGGSWNAMLGAY--TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F MPE D SWN+++GA ++ P + FL+ +G N+IT+++VL + +
Sbjct: 192 IFSSMPEHDQVSWNSIIGALASSERSLP-EAVACFLNALRAGQKLNRITFSSVLSAVSSL 250
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVI 215
+ KQ+HGL +K E++L+ YGKC M ++F + + ++ V+WN +
Sbjct: 251 SFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSM 310
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y+ +A+ + + ML+ R +F +A L A + +++ GM++H ++
Sbjct: 311 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 370
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D VV +L +MY KCGRL+ A + RN SW S++SGYA G+ EA +LF
Sbjct: 371 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFAN 430
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIK 393
M L G T D VT +L+ C AGL E
Sbjct: 431 MK----------LDGQTPP--------------------DHVTFVGVLSACSHAGLLE-- 458
Query: 394 MGKEVHGFIHRNDYSSNIFVS------NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
GF H S + ++ + + D+ + G L + +M + + + W
Sbjct: 459 -----EGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWR 513
Query: 448 AVLTGYAR-RGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
VL R G+ E +EM ++ P LL
Sbjct: 514 TVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 552
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 151/337 (44%), Gaps = 32/337 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N I CYGKCG +D +F M ER D +WN+M+ Y N + L+L M +G
Sbjct: 276 NALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 335
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ YA VL + A L ++H V+ +V++ S+LVD Y KC + A R
Sbjct: 336 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 395
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLS 258
F+ + +N+ SWN ++ Y G G+EA+ +F M L P + TF L ACS
Sbjct: 396 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAG 455
Query: 259 SPYEGMQ-------IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNI 310
EG + +G+ +I+ + ++ + G L+ +D+ P + N+
Sbjct: 456 LLEEGFKHFESMSDSYGLAPRIEH------FSCMADLLGRAGELDKLEDFIDKMPVKPNV 509
Query: 311 ISWTSIVSGYA-ISGRIRE----ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+ W +++ +GR E A E+ ++ N +++ + Y W++ +
Sbjct: 510 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVK--- 566
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
RK KD D + AG S + M VH F+
Sbjct: 567 -ARKKMKDAD-------VKKEAGYSWVTMKDGVHMFV 595
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 20/233 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L++ + + +YA + AS + ++ + V V + + ++ Y KCG L
Sbjct: 331 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 390
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLR- 151
D A F+ MP R+ SWN+M+ Y ++G L+LF +M G + +T+ VL
Sbjct: 391 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSA 450
Query: 152 -SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
S A LE G K + G + S + D G+ + +D +K V
Sbjct: 451 CSHAGLLEEGF-KHFESMSDSYGLAPRIEHFSCMADLLGRAGELDK----LEDFIDKMPV 505
Query: 211 SWNVIVRRYLV----------AGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
NV++ R ++ A GK+A M F++ E+ +N+ ++A
Sbjct: 506 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN--AVNYVLLGNMYA 556
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 295/580 (50%), Gaps = 42/580 (7%)
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR---RMFDDIQNKNA 209
S+ L ++Q H LI++ + L +SL+ Y + ++ + + + +
Sbjct: 10 SSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTL 69
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
S++ ++ + + + + F + + P F +A+ +C+ L + G Q+H
Sbjct: 70 FSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAF 129
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
F D +V SLT MY+KC R+ DAR L D+ +R+++ W+++++GY+ G + EA
Sbjct: 130 AAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEA 189
Query: 330 RELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ELF EM E N++SWN MLAG+ + + EA+ +M D T+ +L
Sbjct: 190 KELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPA 249
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS-ARIW----------- 433
L ++ +G +VHG++ + S+ FV +A+LDMY KCG ++ +R++
Sbjct: 250 VGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSL 309
Query: 434 ----------------------FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ- 470
F + V+W +++ ++ G+ EA+ F +MQ
Sbjct: 310 NAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA 369
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+ P+ T +L+ AC NIS+L GK+IHCF +R +V AL+++Y KC ++
Sbjct: 370 YGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQL 429
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A R F + S+L+++ N+++ G+ + + +E +E+F +M + G KPD +TF +L AC
Sbjct: 430 ARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQ 489
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G + + ++SM ++GI P++EHY C++ L R G ++E + MPF P +
Sbjct: 490 NGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWG 549
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR + +LGE AA +L L P P + + +N +
Sbjct: 550 ALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIY 589
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 213/438 (48%), Gaps = 41/438 (9%)
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
L +P S+++++ A+ ++ L F ++ + + + ++S A
Sbjct: 60 LSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRA 119
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +QLH GF + I+ SSL Y KC + DAR++FD + +++ V W+ ++
Sbjct: 120 LDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAG 179
Query: 219 Y------------------------LVAGNG-----------KEAVVMFFKMLREDIRPL 243
Y LV+ NG EAV MF ML + P
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
T + L A L G Q+HG +IK D V+ ++ +MY KCG +++ + D
Sbjct: 240 GSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFD 299
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKE 359
+ +E I S + ++G + +G + A E+FN+ ++ NV++W +++A +++ E
Sbjct: 300 EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLE 359
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL+ M+ + + VT+ ++ C +S + GKE+H F R +++V +AL+D
Sbjct: 360 ALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALID 419
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKF 478
MY KCG ++ AR F +MS + VSWNAV+ GYA G+++E M F M Q +P
Sbjct: 420 MYAKCGRIQLARRCFDKMSA-LNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLV 478
Query: 479 TFETLLAACANISSLEQG 496
TF +L+ACA E+G
Sbjct: 479 TFTCVLSACAQNGLTEEG 496
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 203/470 (43%), Gaps = 98/470 (20%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
SG L +D V+ SL H++ C I++ARKL + P V + + I Y +
Sbjct: 133 SGFL-TDSIVASSL-THMYLKC---DRILDARKLFDRM----PDRDVVVWSAMIAGYSRL 183
Query: 91 GNLDDARGLFDEMPERDGG------SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
G +++A+ LF EM R GG SWN ML + NGF + +F M G +
Sbjct: 184 GLVEEAKELFGEM--RSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGS 241
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T + VL + ++ V Q+HG ++K+G + + S+++D YGKC + + R+FD++
Sbjct: 242 TVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEV 301
Query: 205 Q---------------------------NK--------NAVSWNVIVRRYLVAGNGKEAV 229
+ NK N V+W I+ G EA+
Sbjct: 302 EEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEM 288
+F M + P T + + AC +S+ G +IH ++ DDV +GS L +M
Sbjct: 362 ELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGI-FDDVYVGSALIDM 420
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KCGR++ AR D+ N++SW +++ GYA+ G+ +E E+F+
Sbjct: 421 YAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFH-------------- 466
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA--GLSE-----IKMGKEVHGF 401
+M ++ + D VT +L+ CA GL+E E HG
Sbjct: 467 -----------------MMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGI 509
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ ++ + L+ + + G L A +M D W A+L+
Sbjct: 510 EPKMEHYA------CLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 293/573 (51%), Gaps = 37/573 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I YGKCG LD+A LFD+MPE++ SWN+++ +++NGF F +
Sbjct: 245 LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
Query: 137 SG--VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
SG + + T +L + E + V +HG+ VK G +++ ++L+D Y KC +
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL 364
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLN-FTFANALF 252
++A +F I+NK+ VSWN ++ Y G E + KM + E++ +N T N L
Sbjct: 365 SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
AC S +HG ++ F+ +++ + Y KCG L
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL----------------- 467
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
A +F M ++V SWNA++ G+ ++ +ALDF F M +
Sbjct: 468 --------------VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGI 513
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D ++ +L C L ++ GKE+HGF+ RN N FV+ +LL +Y C R
Sbjct: 514 LPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT 573
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
+F +M + + V WNA+L+GY++ EA++ F +M + P + ++L AC+ +S
Sbjct: 574 YFERMGDK-NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS 632
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L GK++HCF ++N + +L+++Y K L ++ R+F + +V N MI
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
GF + +G +A+E+F MK+ +PD TF G+L AC H G V L + M+ Y +
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLE 752
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
P+LEHY C+I + R G + E +F+N MP P
Sbjct: 753 PELEHYACVIDMLGRAGRLNEALNFINEMPEEP 785
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/546 (27%), Positives = 267/546 (48%), Gaps = 35/546 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN-RAIECYGKCGNLDDARGLFDEMPER 106
L Q C K + RKL+ L F+LN R I Y CG ++R +FD + +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WNA++ Y +N + FL++ + + + T+ ++++ + ++ + K +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG+ VK G ++ + ++++ YGKC + +A +FD + +N +SWN ++R + G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 226 KEAVVMFFKMLR--EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA F +L + + P T L CS + GM IHG+ +K+ + +V
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG L +A L + + ++++SW S++ Y+ G + E +L +M
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM------- 405
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W M + ++++VT+ +L C SE+ + +HG+
Sbjct: 406 W----------------------MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSL 443
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R+ + ++NA + Y KCG+L A F+ M+ + SWNAV+ G+A+ G +A+
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS-SWNAVIGGHAQNGDPIKAL 502
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ EM + P F+ +LL AC + L+ GK+IH FV+RN E+N +L+ +Y
Sbjct: 503 DFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLY 562
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
C Y F+ + + N+M+ G+ NE EAL +F M +G++PD I
Sbjct: 563 FHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIA 622
Query: 583 GILLAC 588
IL AC
Sbjct: 623 SILGAC 628
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + Y C R F+ M +++ WNAML Y+QN P L LF M
Sbjct: 553 FVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSD 612
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ ++I A++L + ++ LG+ K++H +K + + SL+D Y K + +
Sbjct: 613 GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHS 672
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+R+F+ + K SWNV++ + V G G +AV +F M R D +P FTF L AC
Sbjct: 673 QRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHA 732
Query: 258 SSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW 313
EG+ + + E + + +M + GRL +A +++ P+E + W
Sbjct: 733 GLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 483 LLAACANISSLEQGKQI-HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL C ++E G+++ + + + + V L+ +Y+ C + VF +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 542 DVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
++ N+++ G+ NE EA+ F L+ +PD+ TF ++ AC + ++ L +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG-KS 231
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
M K G+I L MI LY + G++ E + ++MP
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/616 (28%), Positives = 301/616 (48%), Gaps = 54/616 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F N + YGK G L AR LFD MPER+ S+ ++ A+ Q G LF +
Sbjct: 96 LFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRW 155
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G NQ +L+ + G++ +H K G N + S L+DAY C +++D
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACS 255
A +F+ I K+AV W +V Y E+ P N F A +CS
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCY-----------------SENDCPENAFRCAQ---SCS 255
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L+ IHG IK + + V G+L +MY KCG ++DAR + ++I +
Sbjct: 256 LLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF 315
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S YA S + +A ELF + +V+ +
Sbjct: 316 MISRYAQSNQNEQAFELFLRLMRSSVLP-------------------------------N 344
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ +L +L C + ++ GK++H + + S++FV NAL+D Y KC ++ S+ F
Sbjct: 345 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFS 404
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLE 494
+ + ++VSWN ++ G+++ G EEA++ F EMQ P ++ T+ ++L ACA+ +S+
Sbjct: 405 SL-RDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 463
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QIHC + ++ + + V +L++ Y KC + A++VF+ D+I N++I G+
Sbjct: 464 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 523
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ + +ALE+F M K ++ + ITF +L C G V L FDSMR +GI P +
Sbjct: 524 LHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY C+++L R G + + F+ +P P+ + R + C + LG ++A ++ E
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 643
Query: 675 LNPWAPFQFKITTNRF 690
+ P + + +N +
Sbjct: 644 IEPQDETTYVLLSNMY 659
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 196/404 (48%), Gaps = 33/404 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P YSL + + Q C + + +++ ++ + +F+ N ++ Y KC ++D +
Sbjct: 343 PNEYSL-SSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLK 401
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F + + + SWN ++ ++Q+G L +F +M + + Q+TY++VLR+ A
Sbjct: 402 IFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTAS 461
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + Q+H I K F + ++ +SL+D Y KC + DA ++F + ++ +SWN I+
Sbjct: 462 IRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISG 521
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS------SPYEGMQI-HGVII 271
Y + G +A+ +F +M + ++ + TF L C S ++ M+I HG I
Sbjct: 522 YALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHG--I 579
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---R 327
K E ++ + + GRL DA + D P + + W +++S I + R
Sbjct: 580 KPSMEHYTCIV----RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 635
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+ E E+ ++ ++ + Y + +LD V L+RK+ ++I +
Sbjct: 636 FSAEKILEIEPQDETTYVLLSNMYAAA----GSLDQVALLRKSMRNIG-------VRKVP 684
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
GLS +++ E+H F + ++ V NA+L+ NL+++R
Sbjct: 685 GLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWL----NLKTSR 724
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
A Y +L W E + + +D L C + + G+ VHG + R
Sbjct: 31 FAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGG 90
Query: 408 SS--NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++F +N LL+MY K G L SAR F +M + R+ VS+ ++ +A+RG E A
Sbjct: 91 VGRLDLFCANVLLNMYGKLGPLASARRLFDRMPE-RNMVSFVTLVQAHAQRGDFEAAAAL 149
Query: 466 FSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F ++WE ++F T+L + + +H + ++ N L++ Y+
Sbjct: 150 FRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
C + A VF D ++ +M+ + N+
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEND 242
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 294/585 (50%), Gaps = 43/585 (7%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N L Y +G L+ F DM S V +Q+T+ +L ++ + L + +Q+H + +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + +SL++ Y K AR +FD++ ++ +SWN ++ G EAV +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGM----QIHGVIIKIDFEGDDVVLGSLTE 287
F ++LR ++P +T + L A S L EG+ Q+H IKI+ D V
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSLSKQVHVHAIKINNVSDSFV------ 454
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
T+++ Y+ + ++EA LF E ++++WNAM
Sbjct: 455 -------------------------STALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAM 488
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+AGYT+S + L LM K + D TL + C L I GK+VH + ++ Y
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++VS+ +LDMY KCG++ +A+ F + D V+W +++G G+ E A FS
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTMISGCIENGEEERAFHVFS 607
Query: 468 EMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKC 525
+M+ P +FT TL A + +++LEQG+QIH ++ NC V +LV++Y KC
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT-SLVDMYAKC 666
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
++ A +FK +++ N+M++G + G+E L++F MK GIKPD +TF G+L
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V A + SM YGI P++EHY C+ R G +K+ E+ + M +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
M R + CR G G+ A +L EL P + + +N +
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 260/572 (45%), Gaps = 47/572 (8%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
+S ++ + + ++TF P FL+N I Y KCG+L AR +FD+MP+RD SWN+
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 114 MLGAYTQNG-----FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+L AY Q+ + LF + V +++T + +L+ + S+ HG
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
K G G+ + +LV+ Y K + + + +F+++ ++ V WN++++ YL G +EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 229 VVMFFKMLREDIRPLNFT-------------------FANA---------LFACSFLSSP 260
+ + + P T FAN +F LS
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 261 YEGMQIHGVI------IKIDFEGDDVVLGSLTEMYVKCGRLEDARGL----LDQPDERNI 310
Q ++ ++ D E D V + VK L + + L + +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
S+++ Y + AR +F+ M ER++ISWN+++AG ++ L EA+ + +
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 371 TKDIDQVTLGLILNVCAGLSE-IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
DQ T+ +L + L E + + K+VH + + S+ FVS AL+D Y + ++
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A I F + D V+WNA++ GY + + + F+ M + R FT T+ C
Sbjct: 471 AEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ ++ QGKQ+H + I++ Y++++ ++++Y KC + A F D + +
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
MI G N A VF M+ G+ PD T
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 205/411 (49%), Gaps = 35/411 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K AR +FD M ERD SWN+++ QNG + LF+ + G+
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 141 ANQITYANVLRSSAEELE-LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+Q T +VL++++ E L +SKQ+H +K + + ++L+DAY + M +A
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+ N + V+WN ++ Y + +G + + +F M ++ R +FT A C FL +
Sbjct: 474 LFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G Q+H IK ++ D V + +MYVKCG + A+ D + ++WT+++SG
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+G A +F++M V+ D+ T+
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLP-------------------------------DEFTI 621
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+ + L+ ++ G+++H + + +++ FV +L+DMY KCG++ A F ++ +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI-E 680
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN 489
+ +WNA+L G A+ G+ +E + F +M+ +P K TF +L+AC++
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 227/485 (46%), Gaps = 49/485 (10%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
LR++ +L + K H I+ L ++L+ Y KC +T ARR+FD + +++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 210 VSWNVIVRRYL-----VAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEG 263
VSWN I+ Y V N ++A ++F ++LR+D+ T + L C +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
HG KI +GD+ V G+L +Y+K G++++ + L ++ R+++ W ++ Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 324 GRIREARELF----------NEMPER----------------------------NVISWN 345
G EA +L NE+ R +I N
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRN 284
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
L+ Y S + L M ++ + DQVT L+L + + +G++VH +
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ VSN+L++MY K AR F MS+ RD +SWN+V+ G A+ G EA+
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE-RDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 466 FSE-MQWETRPSKFTFETLLAACANI-SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F + ++ +P ++T ++L A +++ L KQ+H I+ + AL++ Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
+ C++ A +F E + D++ N+M+ G+ + G + L++F LM K+G + D T
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 584 ILLAC 588
+ C
Sbjct: 523 VFKTC 527
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 160/327 (48%), Gaps = 5/327 (1%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y++ + L + + + ++++ + + F+ I+ Y + + +A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LF E D +WNAM+ YTQ+ +TL+LF M+ G ++ T A V ++
Sbjct: 473 ILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ KQ+H +K G+ ++ + S ++D Y KC M+ A+ FD I + V+W ++
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G + A +F +M + P FT A A S L++ +G QIH +K++
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL +MY KCG ++DA L + + NI +W +++ G A G +E +LF +M
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 338 ERNV----ISWNAMLAGYTRSLLWKEA 360
+ +++ +L+ + S L EA
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEA 738
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 158/362 (43%), Gaps = 46/362 (12%)
Query: 284 SLTEMYVKCGRLEDARGL-LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
++T + G+ AR L ++ ER +I+ +++S Y+ G + AR +F++MP+R+++
Sbjct: 49 AITSSDLMLGKCTHARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 343 SWNAMLAGYTRSLL-----WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
SWN++LA Y +S ++A ++R+ ++TL +L +C + +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
HG+ + + FV+ AL+++Y K G ++ ++ F +M RD V WN +L Y G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKAYLEMG 225
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EEA+ S P++ T L + S Q+ F N
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS---DAGQVKSFANGN---------- 272
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
SS ++I N + + H+ + L+ F M + ++
Sbjct: 273 -------------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC---RYGYMKEL 633
D +TF +L + ++ L Q M K G+ L +I +YC ++G+ + +
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVH-CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 634 ED 635
D
Sbjct: 373 FD 374
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF-----CHNERGREALEVFGLMKKE 572
L+ +Y+KC L YA RVF + D++ NS++ + C E ++A +F +++++
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ +T +L C+H G V A + F CK G+ ++ +Y ++G +KE
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 633 LEDFVNRMPFNPTV 646
+ MP+ V
Sbjct: 199 GKVLFEEMPYRDVV 212
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 186/650 (28%), Positives = 316/650 (48%), Gaps = 40/650 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM--PE 105
L + C S + + L L+ LLN I Y KCG+ ++A +F M +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQITYANVLRSSAEELELGVS 162
RD SW+A++ + N R L FL M + + + N+ + +LRS + L
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 163 KQLHGLIVKRG-FCGNVILESSLVDAYGKC-MVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ ++K G F +V + +L+D + K + + AR +FD +Q+KN V+W +++ RY
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +AV +F ++L + P FT + L AC L G Q+H +I+ D
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L +MY K S + +R++FN M N
Sbjct: 285 VGCTLVDMYAK-------------------------------SAAVENSRKIFNTMLHHN 313
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V+SW A+++GY +S +EA+ M + T +L CA L + +GK++HG
Sbjct: 314 VMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ S+ V N+L++MY + G + AR F + ++ + +S+N A+ S+
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEK-NLISYNTAADANAKALDSD 432
Query: 461 EAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
E+ E S FT+ LL+ A I ++ +G+QIH ++++ + N+ AL+
Sbjct: 433 ESFNHEVE-HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALIS 491
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y+KC E A++VF + +VI S+I GF + +ALE+F M + G+KP+ +T
Sbjct: 492 MYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVT 551
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ +L AC H G + A + F+SM + I P++EHY CM+ L R G + E +F+N M
Sbjct: 552 YIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSM 611
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
PF+ + R CR + LGE AA+++ E P P + + +N +
Sbjct: 612 PFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLY 661
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
A+ + E + S + T LL AC +LE GK +H +I + ++ V
Sbjct: 16 AKDLKFESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSV 75
Query: 514 CRGALVEVYTKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGREALEVFGLM-- 569
+L+ +Y+KC E A+ +F+ D++ +++I F +N AL F M
Sbjct: 76 LLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQ 135
Query: 570 -KKEGIKPDHITFHGILLAC 588
+ I P+ F +L +C
Sbjct: 136 CSRNIIYPNEYCFTALLRSC 155
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 287/566 (50%), Gaps = 47/566 (8%)
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
++ Y +L+ ++ ++ +HG ++K G N + S LV+ Y KC M DARR+F+
Sbjct: 64 KLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFE 123
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
++ +N V+W ++ ++ K A+ +F +ML P +T + L ACS L S
Sbjct: 124 NMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKL 183
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G Q H IIK + D V +L +Y KCGRLEDA + E+N+ISWTS VS
Sbjct: 184 GDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGD 243
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G + LF EM ++ ++ TL
Sbjct: 244 NGAPVKGLRLFVEMISEDI-------------------------------KPNEFTLTSA 272
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C + +++G +V + Y SN+ V N+LL +Y K G + A +F +M
Sbjct: 273 LSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDD-VS 331
Query: 443 KVSWNAVLTGYARR-----------GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANI 490
V+WNA++ G+A+ + EA+ FS++ Q +P FT ++L+ C+ +
Sbjct: 332 MVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRM 391
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++EQG+QIH I+ + +V+ +L+ +Y KC +E A + F E S+ +I SMI
Sbjct: 392 LAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMI 451
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
GF + ++AL +F M G++P+ +TF G+L AC H G V AL +F+ M+ KY I
Sbjct: 452 TGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKI 511
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P ++HYECM+ ++ R G +++ +F+ +M + P+ + CR +G LG +A+
Sbjct: 512 KPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASE 571
Query: 671 RLNELNPWAPFQFKITTNRF---DRY 693
+L L P P + + N + DR+
Sbjct: 572 QLLSLKPKDPETYVLLLNMYLSADRF 597
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 250/498 (50%), Gaps = 27/498 (5%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
Y L Q C ++ + + +++ F+++ + Y KCGN++DAR +F+ M
Sbjct: 66 FYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENM 125
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P R+ +W ++ + QN P + +F +M ++G + T + VL + + L +
Sbjct: 126 PRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGD 185
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q H I+K + + S+L Y KC + DA + F I+ KN +SW V G
Sbjct: 186 QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNG 245
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ + +F +M+ EDI+P FT +AL C + S G Q+ + IK +E + V
Sbjct: 246 APVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRN 305
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +Y+K G + +A ++ D+ ++++W ++++G+A +M E +
Sbjct: 306 SLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHA-------------QMMELTKDN 352
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+A G EAL + ++ D TL +L+VC+ + I+ G+++H
Sbjct: 353 LSACQRG-------SEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTI 405
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + S++ VS +L+ MY KCG++ A F +MS R ++W +++TG+++ G S++A+
Sbjct: 406 KTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMST-RTMIAWTSMITGFSQHGMSQQAL 464
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEINVVCRG--ALV 519
F +M RP+ TF +L+AC++ + Q ++ F +++ Y+I V +V
Sbjct: 465 HIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQA--LNYFEIMQKKYKIKPVMDHYECMV 522
Query: 520 EVYTKCCCLEYAIRVFKE 537
+++ + LE A+ K+
Sbjct: 523 DMFVRLGRLEQALNFIKK 540
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 6/284 (2%)
Query: 361 LDF---VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
LDF + L ++ T++ +++ +L C + VHG + + N FV + L
Sbjct: 46 LDFGEALLLNKEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFL 105
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+++Y KCGN+ AR F M RR+ V+W ++ G+ + Q + A+ F EM + + PS
Sbjct: 106 VNVYAKCGNMEDARRVFENMP-RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPS 164
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+T +L AC+++ SL+ G Q H ++I+ + + AL +Y+KC LE A++ F
Sbjct: 165 IYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFS 224
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+VI S + N + L +F M E IKP+ T L C +++L
Sbjct: 225 RIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLEL 284
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
Q S+ K+G L ++ LY + G++ E F NRM
Sbjct: 285 GTQVC-SLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRM 327
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 193/721 (26%), Positives = 333/721 (46%), Gaps = 106/721 (14%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y + Q C + + +++ + ++ FY ++ + + Y KC L+ A+ LF
Sbjct: 48 IYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNE-YIETKLVIFYAKCDALEIAQVLF 106
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
++ R+ SW A++G + G L F++M +G+ + NV ++
Sbjct: 107 SKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSR 166
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +HG + K G V + SSL D YGKC V+ DAR++FD I ++NAV+WN ++ Y+
Sbjct: 167 FGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYV 226
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +EA+ + +M +E I P T + L A + + EG Q H + I E D++
Sbjct: 227 QNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNI 286
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
LG TSI++ Y G I A +F+ M E++
Sbjct: 287 -LG------------------------------TSILNFYCKVGLIEYAEMIFDGMIEKD 315
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V++WN +++GY + L +EA+ LMR+ D VTL +++ +K+GKE+
Sbjct: 316 VVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 375
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSAR------------IW--------------- 433
+ R+ S+I +++ +DMY KCG++ +A+ +W
Sbjct: 376 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 435
Query: 434 ----FYQM---SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----------WET--- 473
FY+M S + ++WN ++ R GQ EA F +MQ W T
Sbjct: 436 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMN 495
Query: 474 -----------------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YE 509
RP+ FT L+AC N++SL G+ IH ++IRN Y
Sbjct: 496 GLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYS 555
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+ +LV++Y KC + A RVF ++ + N+MI + + REA+ ++ +
Sbjct: 556 FSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 615
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ G+KPD+IT +L AC + +V A++ F M K+G+ P LEHY M+ L G
Sbjct: 616 EDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGE 675
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNR 689
+ + MP+ P M++ +F+ C K L E+ ++ L E P + + +N
Sbjct: 676 TDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNA 735
Query: 690 F 690
+
Sbjct: 736 Y 736
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 252/531 (47%), Gaps = 36/531 (6%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGN 177
+NG L L +M++ + Y +L+ E +L +Q+H I+K+G + N
Sbjct: 23 KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 82
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+E+ LV Y KC + A+ +F ++ +N SW I+ G G+ A++ F +ML
Sbjct: 83 EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 142
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
I P NF N AC L G +HG + K V SL +MY KCG L+D
Sbjct: 143 NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDD 202
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR + D +RN ++W +++ GY +G EA L +E
Sbjct: 203 ARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSE---------------------- 240
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
MRK + +VT+ L+ A + I+ GK+ H N + + ++
Sbjct: 241 ---------MRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSI 291
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
L+ Y K G + A + F M + +D V+WN +++GY ++G EEA+ M+ E +
Sbjct: 292 LNFYCKVGLIEYAEMIFDGMIE-KDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFD 350
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T TL++A + +L+ GK+I C+ IR+ E ++V V++Y KC + A +VF
Sbjct: 351 CVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFD 410
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ D+I+ N+++ + + EAL +F M+ E + P+ IT++ I+L+ + G V
Sbjct: 411 STVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNE 470
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
A + F M+ GI P L + M+ + G +E F+ +M + P
Sbjct: 471 AKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRP 520
>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
Length = 708
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 298/602 (49%), Gaps = 34/602 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + + Y K G+++DA +F+ M G WNAM+G Y Q + +L++ M +
Sbjct: 94 FVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYK 153
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+S + T+ N L+ L +Q+HGLI++ + + +SL+D Y K A
Sbjct: 154 GISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYA 213
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++FD +Q+K+ +SWN + + +E F K++ ++P TF+ C
Sbjct: 214 LKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEA 273
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G+Q H + + + V SL M+ +CG +
Sbjct: 274 LDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAM---------------------- 311
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
R A +F+ P +++ + N M++GY + EAL+ + + D+
Sbjct: 312 ---------RMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADEC 362
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T L C K+G+++HG I ++ ++S +V ++LL Y G L + F+
Sbjct: 363 TFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDS-FEFFNG 421
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+R D VSW A+++ +G S EA+ + + + +P +F F ++ CA I++ Q
Sbjct: 422 VERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQT 481
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL-DVIICNSMILGFCH 555
K +H V++ YE +V A+++ Y KC +E A RVF ++S DVI+ N+M++ + H
Sbjct: 482 KSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAH 541
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ REA+E F MK ++P TF ++ AC H G V+ FF SM YG+ P +
Sbjct: 542 HGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPD 601
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+Y C++ L+ R G++++ + + MPF P + R + + CR +G LGEWAA++L +L
Sbjct: 602 NYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQL 661
Query: 676 NP 677
P
Sbjct: 662 VP 663
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 224/505 (44%), Gaps = 37/505 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y KCG L +F EMP ++ SW ++ QNG L ++L+M +G+ N+
Sbjct: 2 YTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFAL 61
Query: 147 ANVLRSSAE--ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
V ++ A ELG+ +H +K G N + SS+++ Y K + DA R+F+ +
Sbjct: 62 GCVTKACAALGGKELGLC--VHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECM 119
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
N WN ++ Y G E++ + M + I FTF NAL C + + G
Sbjct: 120 DNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGR 179
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QIHG+II+ + V+ SL +MY K G A + D+ +++IISW ++ +G +
Sbjct: 180 QIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGD 239
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
RE F+++ ML G L + F L R + +D V+
Sbjct: 240 DAREIGRFFHKL----------MLTG-----LKPNCVTFSILFRFCGEALDLVS------ 278
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
G + H R S V+++L++M+ +CG +R A + F + +
Sbjct: 279 ----------GLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVF-DSAPFKSIH 327
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+ N +++GY + EA+ F + + TF + L AC + + G+Q+H +
Sbjct: 328 TCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTI 387
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+++ + +L++ Y L+ + F LD++ +MI H EA+
Sbjct: 388 VKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAI 447
Query: 564 EVFGLMKKEGIKPDHITFHGILLAC 588
+ +K+ G KPD F I C
Sbjct: 448 GLLNRLKEAGGKPDEFIFGSIFNCC 472
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ LF+ C + +V + F + + + I + +CG + A +FD P
Sbjct: 263 FSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAP 322
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ + N M+ Y N L LF ++N G+ A++ T+++ L + + +Q
Sbjct: 323 FKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQ 382
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG IVK GF + SSL+ Y ++ D+ F+ ++ + VSW ++ + G
Sbjct: 383 MHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGY 442
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA+ + ++ +P F F + C+ +++ + +H +++K+ +E V +
Sbjct: 443 SSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASA 502
Query: 285 LTEMYVKCGRLEDARGLLDQPDE-RNIISWTSIVSGYAISGRIREARELFNEM 336
+ + Y KCG +E+AR + DQ R++I + ++V YA G +REA E F +M
Sbjct: 503 VIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKM 555
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 34/356 (9%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L + + +N++SWT +VSG +G ++ EM ++
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVP---- 56
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
++ LG + CA L ++G VH F +
Sbjct: 57 ---------------------------NEFALGCVTKACAALGGKELGLCVHCFALKVGM 89
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
N FV +++L+MY K G++ A F M WNA++ GYA+ E++ S
Sbjct: 90 EKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGC-WNAMIGGYAQCSYGFESLKIVS 148
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
MQ++ FTF L C + +L G+QIH +I++ + +L+++Y K
Sbjct: 149 VMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNG 208
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
YA++VF D+I N++ G + RE F + G+KP+ +TF +
Sbjct: 209 GGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFR 268
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
C ++ LQ F + ++GI + +I ++ R G M+ + PF
Sbjct: 269 FCGEALDLVSGLQ-FHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPF 323
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 155/335 (46%), Gaps = 14/335 (4%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L++DE ++ + C ++ R++ +V ++ + ++CY G L
Sbjct: 357 LEADECT----FSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLL 412
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
DD+ F+ + D SW AM+ A G+ + L + +G ++ + ++
Sbjct: 413 DDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCC 472
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSW 212
A +K +H L+VK G+ +V + S+++DAY KC + +ARR+FD ++ + +
Sbjct: 473 AGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILF 532
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N +V Y G +EAV F KM + P TF + + ACS L +G I +
Sbjct: 533 NTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQG-DIFFKSMN 591
Query: 273 IDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIR-- 327
+D+ D G L +++ + G LEDA+ +++ P W S+++G I G
Sbjct: 592 LDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELG 651
Query: 328 --EARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
A++L +PE N ++ + Y+ W +A
Sbjct: 652 EWAAKKLLQLVPE-NDAAYVLLSKVYSEEGSWSDA 685
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 204/755 (27%), Positives = 339/755 (44%), Gaps = 130/755 (17%)
Query: 13 LSKSSP-KPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASS--KAIVEARKLESNLV 69
LS P +PTP++ ++ + ++H++QLCAS+ A+ + + ++
Sbjct: 11 LSPGCPGRPTPAQAAF------------LATATFSHVYQLCASAGHSALATGQAAHARML 58
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
P +F+ N ++ Y +CG A G+FD MP RD SWN ML AY G G
Sbjct: 59 VSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATS 118
Query: 130 LF-------------------------------LDMNHSGVSANQITYANVLRSSAEELE 158
L ++M GV+ ++ T A +L++ +
Sbjct: 119 LLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDD 178
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + Q+H L VK G +V S+LVD YGKC + DA F + +N+VSW +
Sbjct: 179 LALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAV--- 235
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+AG + M R L L C ++ Q+H IK F D
Sbjct: 236 --IAGCVQNEQYM---------RGLEL-----LCRCKAITCLSTARQLHAHAIKNKFSSD 279
Query: 279 DVVLGSLTEMYVKCGRLEDAR----GLLDQPDER-------------------------- 308
VV ++ ++Y K L DAR GL + E
Sbjct: 280 RVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTR 339
Query: 309 -----NIISWTSI------VSGYAISGRIR--------------EARELFNEMPERNVIS 343
++S + + V G+ + +R EA +F EM +R+ +S
Sbjct: 340 SGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS 399
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN ++A ++ +++ + + M ++ + D T G +L CAGL ++ G VHG
Sbjct: 400 WNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAI 459
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ + FVS+ ++DMY KCG + A + + ++ VSWN+++ G++ QSEEA
Sbjct: 460 KSGLGLDAFVSSTVVDMYCKCGMITEA-LKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQ 518
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
FSEM +P FT+ T+L +CAN++++E GKQIH +I+ + LV++Y
Sbjct: 519 KFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMY 578
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC + + +F++ LD + N+MI G+ + +G EALE+F +K + P+H TF
Sbjct: 579 AKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFV 638
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G + ++F M +Y + PQLEH+ CM +E F+ MP
Sbjct: 639 AVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMPL 690
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + + C+ + E AA + L+P
Sbjct: 691 EADAVIWKTLLSICKIRQDVEVAETAASNVLRLDP 725
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 312/613 (50%), Gaps = 45/613 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+ + G +D A+ +F++M +R+ + N ++ + ++F +M V N +Y
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSY 353
Query: 147 ANVLRSSAEELELGVSK----QLHGLIVKRGFCGN-VILESSLVDAYGKCMVMTDARRMF 201
A +L + E L K ++H +++ +++ ++LV+ Y KC + +AR +F
Sbjct: 354 AVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIF 413
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ +K+ VSWN I+ +EAV F M R + P F+ + L +C+ L
Sbjct: 414 QLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIM 473
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G QIHG IK + D V +L +Y + +E
Sbjct: 474 LGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCME------------------------- 508
Query: 322 ISGRIREARELFNEMPERNVISWNAM---LAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
E +++F MPE + +SWN+ LA S+L +A+ + M + ++VT
Sbjct: 509 ------EYQKVFFLMPEYDQVSWNSFIGALATSEASVL--QAIKYFLEMMQAGWKPNRVT 560
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
IL+ + LS +++G+++H I ++ + + + N LL Y KC + I F +MS
Sbjct: 561 FINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMS 620
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAM-TSFSEMQWETRPSKFTFETLLAACANISSLEQGK 497
+RRD+VSWNA+++GY G +AM + MQ R FT T+L+ACA++++LE+G
Sbjct: 621 ERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGM 680
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
++H IR C E VV ALV++Y KC ++YA R F+ ++ NSMI G+ +
Sbjct: 681 EVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHG 740
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
G +AL++F MK+ G PDH+TF G+L AC H G V + F SM Y + P++EH+
Sbjct: 741 HGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHF 800
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEWAARRLNEL 675
CM+ L R G +K+LE+F+ MP NP + R I CR N T LG AA+ L EL
Sbjct: 801 SCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIEL 860
Query: 676 NPWAPFQFKITTN 688
P + + +N
Sbjct: 861 EPLNAVNYVLLSN 873
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 267/547 (48%), Gaps = 51/547 (9%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
S + +A +L + T VF N + + + GNL A+ LFDEMP+++ SW+ +
Sbjct: 52 SCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE----ELELGVSKQLHGLIV 170
+ Y QNG P LF + +G+ N + LR+ E L+LG+ ++HGLI
Sbjct: 112 VSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGM--EIHGLIS 169
Query: 171 KRGFCGNVILESSLVDAYGKCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K + +++L + L+ Y C + DARR+F++I+ K + SWN I+ Y G+ A
Sbjct: 170 KSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAF 229
Query: 230 VMFFKMLRE----DIRPLNFTFANAL-FACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLG 283
+F M RE + RP +TF + + ACS + + Q+ I K F D V
Sbjct: 230 KLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGS 289
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP---ERN 340
+L + + G ++ A+ + +Q D+RN ++ ++ G A + EA ++F EM E N
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEIN 349
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
S+ +L+ +T KE RK G+EVH
Sbjct: 350 ASSYAVLLSAFTEFSNLKEG------KRK-------------------------GQEVHA 378
Query: 401 FIHRNDYSSN-IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
++ RN I + NAL+++Y KC + +AR F Q+ +D VSWN++++G +
Sbjct: 379 YLIRNALVDVWILIGNALVNLYAKCNAIDNARSIF-QLMPSKDTVSWNSIISGLDHNERF 437
Query: 460 EEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EEA+ F M+ PSKF+ + L++CA++ + G+QIH I+ +++V AL
Sbjct: 438 EEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNAL 497
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG-REALEVFGLMKKEGIKPD 577
+ +Y + C+E +VF D + NS I +E +A++ F M + G KP+
Sbjct: 498 LTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPN 557
Query: 578 HITFHGI 584
+TF I
Sbjct: 558 RVTFINI 564
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 211/423 (49%), Gaps = 35/423 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ + N + Y KC +D+AR +F MP +D SWN+++ N + F M
Sbjct: 390 ILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRR 449
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+G+ ++ + + L S A + + +Q+HG +K G +V + ++L+ Y + M +
Sbjct: 450 NGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEE 509
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVA-GNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+++F + + VSWN + + + +A+ F +M++ +P TF N L A S
Sbjct: 510 YQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVS 569
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNIISWT 314
LS G QIH +I+K D+ + +L Y KC ++ED + + E R+ +SW
Sbjct: 570 SLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWN 629
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++SGY +G + +A+ V+LM + + +
Sbjct: 630 AMISGYIHNG-------------------------------ILHKAMGLVWLMMQKGQRL 658
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D TL +L+ CA ++ ++ G EVH R + + V +AL+DMY KCG + A F
Sbjct: 659 DDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYAS-RF 717
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSL 493
+++ R+ SWN++++GYAR G +A+ F++M+ + P TF +L+AC+++ +
Sbjct: 718 FELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLV 777
Query: 494 EQG 496
++G
Sbjct: 778 DEG 780
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 138/296 (46%), Gaps = 20/296 (6%)
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ ++H I++ +S++F N L++++ + GNL SA+ F +M Q ++ VSW+ +++
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ-KNLVSWSCLVS 113
Query: 452 GYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISS--LEQGKQIHCFVIRNCY 508
GYA+ G +EA F + P+ + + L AC + L+ G +IH + ++ Y
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173
Query: 509 EINVVCRGALVEVYTKC-CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
++V L+ +Y+ C ++ A RVF+E NS+I +C A ++F
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233
Query: 568 LMKKEGI----KPDHITFHGIL-LACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYEC 619
M++E +P+ TF ++ +AC V L + M K + L
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVAC---SLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
++ + RYG + + +M V M + R++ GE AA+ E+
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQ----GEEAAKIFKEM 342
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 33/227 (14%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + CAS + ++ + + V + + ++ Y KCG +D A F+ MP
Sbjct: 664 ATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPV 723
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
R+ SWN+M+ Y ++G G+ L+LF M G + +T+ VL + +
Sbjct: 724 RNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACS----------- 772
Query: 166 HGLIVKRGF-----CGNVILESSLVDAYGKCMV-----MTDARRMFDDIQ----NKNAVS 211
H +V GF G V + ++ + CMV D +++ + I+ N NA+
Sbjct: 773 HVGLVDEGFEHFKSMGEVYELAPRIEHFS-CMVDLLGRAGDVKKLEEFIKTMPMNPNALI 831
Query: 212 WNVIVRRYLVAGN-----GKEAVVMFFKMLREDIRPLNFTFANALFA 253
W I+ A + G+ A M ++ E + +N+ + + A
Sbjct: 832 WRTILGACCRANSRNTELGRRAAKMLIEL--EPLNAVNYVLLSNMHA 876
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 194/721 (26%), Positives = 334/721 (46%), Gaps = 107/721 (14%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y + Q C + + +++ + ++ FY ++ + + Y KC L+ A+ LF
Sbjct: 36 IYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNE-YIETKLVIFYAKCDALEIAQVLF 94
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
++ R+ SW A++G + G L F++M +G+ + NV ++
Sbjct: 95 SKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSR 154
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +HG + K G V + SSL D YGKC V+ DAR++FD I ++NAV+WN ++ Y+
Sbjct: 155 FGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYV 214
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +EA+ + +M +E I P T + L A + + EG Q H + I E D++
Sbjct: 215 QNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNI 274
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
LG TSI++ Y G I A +F+ M E++
Sbjct: 275 -LG------------------------------TSILNFYCKVGLIEYAEMIFDGMIEKD 303
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V++WN +++GY + L +EA+ LMR+ D VTL +++ +K+GKE+
Sbjct: 304 VVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 363
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSAR------------IW--------------- 433
+ R+ S+I +++ +DMY KCG++ +A+ +W
Sbjct: 364 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 423
Query: 434 ----FYQM---SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----------WET--- 473
FY+M S + ++WN ++ R GQ EA F +MQ W T
Sbjct: 424 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMN 483
Query: 474 -----------------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YE 509
RP+ FT L+ACAN++SL G+ IH ++IRN Y
Sbjct: 484 GLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYS 543
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+ +LV++Y KC + A RVF ++ + N+MI + + REA+ ++ +
Sbjct: 544 FSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 603
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ G+KPD+IT LL+C + +V A++ F M K+G+ P LEHY M+ L G
Sbjct: 604 EDGGVKPDNITITS-LLSCNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGE 662
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNR 689
+ + MP+ P M++ +F+ C K L E+ ++ L E P + + +N
Sbjct: 663 TDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNA 722
Query: 690 F 690
+
Sbjct: 723 Y 723
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 250/524 (47%), Gaps = 36/524 (6%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGN 177
+NG L L +M++ + Y +L+ E +L +Q+H I+K+G + N
Sbjct: 11 KNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARN 70
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+E+ LV Y KC + A+ +F ++ +N SW I+ G G+ A++ F +ML
Sbjct: 71 EYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLE 130
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
I P NF N AC L G +HG + K V SL +MY KCG L+D
Sbjct: 131 NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDD 190
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR + D +RN ++W +++ GY +G EA L +E
Sbjct: 191 ARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSE---------------------- 228
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
MRK + +VT+ L+ A + I+ GK+ H N + + ++
Sbjct: 229 ---------MRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSI 279
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
L+ Y K G + A + F M + +D V+WN +++GY ++G EEA+ M+ E +
Sbjct: 280 LNFYCKVGLIEYAEMIFDGMIE-KDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFD 338
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T TL++A + +L+ GK+I C+ IR+ E ++V V++Y KC + A +VF
Sbjct: 339 CVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFD 398
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ D+I+ N+++ + + EAL +F M+ E + P+ IT++ I+L+ + G V
Sbjct: 399 STVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNE 458
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
A + F M+ GI P L + M+ + G +E F+ +M
Sbjct: 459 AKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 501
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 181/644 (28%), Positives = 320/644 (49%), Gaps = 61/644 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPP-------VFLLNRAIECYGKCGNLDDAR 97
YA L C+ +++ + R++ +LV + P L N I YG
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG--------- 97
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
R+ SW +++ A+ QNG G L LF M SG +A+Q + +R+ E
Sbjct: 98 --------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++G +Q+H +K ++I++++LV Y K ++ D +F+ I++K+ +SW I+
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 218 RYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ G EA+ +F +M+ E P F F +A AC + S G QIHG+ IK +
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V SL++MY +C L+ AR V+ Y I E
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSAR-----------------VAFYRI------------EA 300
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P+ ++SWN+++ Y+ L EAL MR + D +T+ +L C G + G+
Sbjct: 301 PD--LVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 358
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H ++ + ++ V N+LL MY +C +L SA F+++ + +D V+WN++LT A+
Sbjct: 359 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEI-KDQDVVTWNSILTACAQH 417
Query: 457 GQSEEAMTSFSEMQWETRPS--KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
EE + FS + ++ PS + + +L+A A + E KQ+H + + + +
Sbjct: 418 NHPEEVLKLFSLLN-KSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRML 476
Query: 515 RGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L++ Y KC L+ A+R+F+ ++ DV +S+I+G+ +EA ++F M+ G
Sbjct: 477 SNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLG 536
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I+P+H+TF G+L AC G V ++ M +YGI+P EH C++ L R G + E
Sbjct: 537 IRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEA 596
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+F+++MPF P + M + + + + +G+ AA + ++P
Sbjct: 597 ANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 640
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 309/615 (50%), Gaps = 34/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + Y K G +D AR +FD + + +W A++ YT++G +L+LF M
Sbjct: 177 VYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMME 236
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S V ++ +++L + + L KQ+H +++ +V + L+D Y KC +
Sbjct: 237 SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKA 296
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ +FD + KN +SW ++ Y+ EAV + +M R +P + ++ L +C
Sbjct: 297 GKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGS 356
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ + G QIH +IK+ E D+ V +L +MY KC L+DA+
Sbjct: 357 VDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAK----------------- 399
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+F+ + +V+ +NAM+ GY+R AL+ MR
Sbjct: 400 --------------RVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSF 445
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T +L + A L +++ K++HG I + +S + F S+AL+D+Y KC +R AR + ++
Sbjct: 446 LTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDAR-YVFE 504
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
+ +D V WN++ +GY + +SEEA +S++Q RP++FTF L A + ++SL
Sbjct: 505 GTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPH 564
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+Q H V++ E + ALV++Y KC +E A ++F S D NSMI +
Sbjct: 565 GQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQ 624
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ + EAL +F M I P+++TF +L AC H G V+ LQ ++SM +YGI P +E
Sbjct: 625 HGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSM-ARYGIEPGIE 683
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY ++ L R G + E +F+ +M P + R + CR G L + AA +
Sbjct: 684 HYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISI 743
Query: 676 NPWAPFQFKITTNRF 690
+P + + +N F
Sbjct: 744 DPMDSGSYVMLSNIF 758
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 165/591 (27%), Positives = 294/591 (49%), Gaps = 35/591 (5%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A+L S+K+I+ RK+ +V + VFL N + Y K G++ DA LFD+MP
Sbjct: 44 ANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPN 103
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQ 164
R+ SW++++ YTQ G+ + L FL+ + V N+ A+++R+ + Q
Sbjct: 104 RNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQ 163
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++K GF +V + +SLV Y K + AR +FD + K V+W I+ Y +G
Sbjct: 164 VHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGR 223
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ ++ +F M+ ++ P + ++ L ACS L G QIH +++ + + D
Sbjct: 224 SEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNV 283
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L + Y KCGR++ + L D+ D +NIISWT++++GY + EA EL EM
Sbjct: 284 LIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMG---- 339
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
WK D+ +L C + ++ G+++H ++ +
Sbjct: 340 ------------WKP---------------DEYACSSVLTSCGSVDALQHGRQIHSYVIK 372
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ FV+NAL+DMY KC L A+ F + V +NA++ GY+R+G A+
Sbjct: 373 VCLEHDNFVTNALIDMYSKCNALDDAKRVF-DVVTCHSVVYYNAMIEGYSRQGYLCGALE 431
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F EM+ + PS TF +LL A + L+ KQIH +I+ + ++ AL++VY+
Sbjct: 432 VFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYS 491
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC C+ A VF+ +++ D+++ NS+ G+ + EA +++ ++ +P+ TF
Sbjct: 492 KCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAA 551
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+ A ++ QF + + K G+ ++ +Y + G ++E E
Sbjct: 552 LTTAASILASLPHGQQFHNQVM-KMGLESDPFITNALVDMYAKCGSVEEAE 601
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 199/424 (46%), Gaps = 32/424 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S A+ R++ S ++ F+ N I+ Y KC LDDA+ +FD + +
Sbjct: 354 CGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYY 413
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAM+ Y++ G+ LE+F +M VS + +T+ ++L SA L L +SKQ+HGLI+K
Sbjct: 414 NAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF + S+L+D Y KC + DAR +F+ NK+ V WN + Y + +EA +
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKL 533
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ + RP FTFA A S L+S G Q H ++K+ E D + +L +MY K
Sbjct: 534 YSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAK 593
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG +E+A + ++ W S++S YA G++ EA +F M N+
Sbjct: 594 CGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNI---------- 643
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ + VT +L+ C+ + ++ G + + + R I
Sbjct: 644 ---------------------NPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGI 682
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
+++ + + G L AR + +M+ R + W ++L+ G E A + +EM
Sbjct: 683 EHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHA-AEMAI 741
Query: 472 ETRP 475
P
Sbjct: 742 SIDP 745
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 15/332 (4%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F + I+ Y KC + DAR +F+ +D WN++ Y +L+ D+ S
Sbjct: 481 FTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLS 540
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
N+ T+A + +++ L +Q H ++K G + + ++LVD Y KC + +A
Sbjct: 541 RERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEA 600
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F K+ WN ++ Y G +EA+ MF M+ +I P TF + L ACS +
Sbjct: 601 EKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHV 660
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWTSI 316
+G+Q + + + E S+ + + GRL +AR +++ R + W S+
Sbjct: 661 GFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSL 720
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+S + G + A+ IS + M +G L +F + D+ +
Sbjct: 721 LSACRVFGNVELAKH-----AAEMAISIDPMDSGSYV------MLSNIFASKGMWGDVKR 769
Query: 377 VTLGLILNVCA---GLSEIKMGKEVHGFIHRN 405
+ L + +N G S I++ EVH F+ R+
Sbjct: 770 LRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRD 801
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++F+SN LL Y K G++ A F +M R + VSW++V++ Y + G +E+A+ F E
Sbjct: 74 DVFLSNLLLHSYFKIGSVFDAGTLFDKMPNR-NLVSWSSVVSMYTQLGYNEKALLYFLEF 132
Query: 470 QWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
Q + +++ +++ AC E G Q+H +VI++ + +V +LV +Y K
Sbjct: 133 QRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGE 192
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ A VF + ++I G+ + R +L++F LM + + PD IL A
Sbjct: 193 IDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNA 252
Query: 588 CIHEGNVKLALQFFD-SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
C G +K Q +R + + + Y +I Y + G +K + +R+
Sbjct: 253 CSVLGYLKGGKQIHAYVLRSETKM--DVSTYNVLIDFYTKCGRVKAGKALFDRL 304
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 319/642 (49%), Gaps = 40/642 (6%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S + LFQ C + +++ +L S + F + Y KC +L AR +F
Sbjct: 3 SRQVLVDLFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELEL 159
DE P + WN+ L +Y + TL LF L + +G + + T L++ A L
Sbjct: 60 DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119
Query: 160 GVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ K +HG K G ++ + S+LV+ Y KC M +A ++F++ Q + V W +V
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y + +EA+ +F +M+ D L+ T + + AC+ L + G +HG++I+ +F+G
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDG 239
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D ++ SL +Y K +G + A LF++MP
Sbjct: 240 DLPLVNSLLNLYAK-------------------------------TGCEKIAANLFSKMP 268
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
E++VISW+ M+A Y + EAL+ M + + + VT+ L CA ++ GK+
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 328
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + + VS AL+DMY KC A + +Q ++D VSW A+L+GYA+ G
Sbjct: 329 IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEA-VDLFQRLPKKDVVSWVALLSGYAQNG 387
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ ++M F M + +P +LAA + + +Q +H +V+R+ + NV
Sbjct: 388 MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGA 447
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM-KKEGIK 575
+L+E+Y+KC L A+++FK DV+I +SMI + + RG EALE+F M K ++
Sbjct: 448 SLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVR 507
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+++TF IL AC H G V+ L+ FD M Y + P EH+ M+ L R G + + D
Sbjct: 508 PNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMD 567
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+NRMP + + CR + +GE AA+ L L+P
Sbjct: 568 IINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDP 609
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 194/359 (54%), Gaps = 2/359 (0%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y RI A +F ++P WN M+ G+ + +L+ M + D+
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
L CAGLS+++ GK +H + S+++FV AL+DMY KCG++ +AR+ F +M+
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R D VSW ++++GYA G + E + F M+ P++ + ++L AC N+ +L +G+
Sbjct: 882 R-DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H +VI+ +E +++ A++++Y+KC L+ A +F E++ D++ ++MI + +
Sbjct: 941 FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
GR+A+++F M K G++P H+TF +L AC H G ++ +F M ++ I +L +Y
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ L R G + E D + MP P + + CR + L E A L L+P
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDP 1119
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 186/409 (45%), Gaps = 66/409 (16%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+DI N + WNV++R + G ++ ++ KM+ + ++P F F AL +C+
Sbjct: 771 ASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAG 830
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
LS G IH ++ D V +L +MY KCG +E
Sbjct: 831 LSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIE-------------------- 870
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
AR +F++M R+++SW +M++GY + E L F LMR + ++
Sbjct: 871 -----------AARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNR 919
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V++ +L C L ++ G+ H ++ + + +I V+ A++DMY KCG+L AR F +
Sbjct: 920 VSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDE 979
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
+ +D V W+A++ Y G +A+ F +M + RPS TF +L+AC++ LE+
Sbjct: 980 -TAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEE 1038
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK +Y + E+ I + L C +LG
Sbjct: 1039 GK-----------------------MYFQLMTEEFVI-----ARKLSNYACMVDLLG--- 1067
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
R + E L++ ++PD + +L AC N+ LA + D +
Sbjct: 1068 --RAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL 1114
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+D A +F+++P WN M+ + +G +LEL+ M G+ ++ + L+S
Sbjct: 768 IDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKS 827
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A +L K +H +V G ++ ++++LVD Y KC + AR +FD + ++ VSW
Sbjct: 828 CAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSW 887
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y G E + F M + P + + L AC L + +G H +I+
Sbjct: 888 TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQ 947
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
FE D +V ++ +MY KCG L+ AR L D+ ++++ W+++++ Y I G R+A +L
Sbjct: 948 TGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDL 1007
Query: 333 FNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLM 367
F++M + V +++ +L+ + S L +E + LM
Sbjct: 1008 FDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLM 1046
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 157/327 (48%), Gaps = 39/327 (11%)
Query: 27 TKTISGHLKSDEPVSYSLYAHLFQL--CASSKAIVEARKLESNLVTFYPTPPVFLLNRAI 84
+K + LK D+ +A F L CA + + + +LV + +F+ +
Sbjct: 807 SKMMEKGLKPDK------FAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALV 860
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
+ Y KCG+++ AR +FD+M RD SW +M+ Y NG+ TL F M SGV N++
Sbjct: 861 DMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRV 920
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
+ +VL + L + H +++ GF ++++ ++++D Y KC + AR +FD+
Sbjct: 921 SILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDET 980
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
K+ V W+ ++ Y + G+G++A+ +F +M++ +RP + TF L ACS EG
Sbjct: 981 AGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEG- 1039
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
K+ F+ +TE +V R + ++ +V +G
Sbjct: 1040 -------KMYFQ-------LMTEEFVIA---------------RKLSNYACMVDLLGRAG 1070
Query: 325 RIREARELFNEMP-ERNVISWNAMLAG 350
++ EA +L MP E + W ++L
Sbjct: 1071 QLSEAVDLIENMPVEPDASIWGSLLGA 1097
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 301/602 (50%), Gaps = 33/602 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F + I+ Y G + DAR +FDE+P RD WN ML Y ++G + F +M
Sbjct: 147 LFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRT 206
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S N +TY +L A QLHGL++ GF + + ++LV Y KC +
Sbjct: 207 SYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLY 266
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++F+ + + V+WN ++ Y+ G EA +F M+ ++P + TFA+ L +
Sbjct: 267 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 326
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S ++H I++ D + +L ++Y K G +E AR + Q ++ T++
Sbjct: 327 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAM 386
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGY + G +A F + + +++ +
Sbjct: 387 ISGYVLHGLNIDAINTFRWLIQEGMVT-------------------------------NS 415
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T+ +L CA ++ +K GKE+H I + + + V +A+ DMY KCG L A +F +
Sbjct: 416 LTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRR 475
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
MS R D V WN++++ +++ G+ E A+ F +M + + + L+A AN+ +L
Sbjct: 476 MSDR-DSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYY 534
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK++H +VIRN + + L+++Y+KC L A VF + + NS+I + +
Sbjct: 535 GKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGN 594
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ RE L+++ M + GI PDH+TF I+ AC H G V + +F M +YGI ++E
Sbjct: 595 HGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARME 654
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ LY R G + E D + MPF P + + CR +G L + A+R L EL
Sbjct: 655 HYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLEL 714
Query: 676 NP 677
+P
Sbjct: 715 DP 716
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 161/595 (27%), Positives = 266/595 (44%), Gaps = 72/595 (12%)
Query: 7 TILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLES 66
TIL N++ + K T S V+ Y + +CA+ +L
Sbjct: 178 TILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHG 237
Query: 67 NLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP 124
++ F P V N + Y KCGNL AR LF+ MP+ D +WN ++ Y QNGF
Sbjct: 238 LVIGSGFEFDPQV--ANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFT 295
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
LF M +GV + +T+A+ L S E L K++H IV+ +V L+S+L
Sbjct: 296 DEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSAL 355
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+D Y K + AR++F + ++ Y++ G +A+ F +++E + +
Sbjct: 356 IDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNS 415
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T A+ L AC+ +++ G ++H I+K E V ++T+MY KCGRL+ A +
Sbjct: 416 LTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRR 475
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+R+ + W S++S ++ +G+ A +LF +
Sbjct: 476 MSDRDSVCWNSMISSFSQNGKPEIAIDLFRQ----------------------------- 506
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M + D V+L L+ A L + GKE+HG++ RN +SS+ FV++ L+DMY KC
Sbjct: 507 --MGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKC 564
Query: 425 GNLRSARIW-FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
GNL A W + + +++VSWN+++ Y G E + + EM + P TF
Sbjct: 565 GNL--ALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLV 622
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+++AC + +++G IH Y C EY I + ++
Sbjct: 623 IISACGHAGLVDEG--IH---------------------YFHCMTREYGI-----GARME 654
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
C + G R E F +K PD + +L AC GNV+LA
Sbjct: 655 HYACMVDLYG-----RAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELA 704
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 249/533 (46%), Gaps = 33/533 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF+ C+ + + +AR++ + ++ +R + Y CG DA LF E+ R
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN M+ G+ L + M S VS ++ T+ V+++ + + +H
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
GF ++ S+L+ Y + DARR+FD++ ++ + WNV++R Y+ +G+
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ F +M + T+ L C+ + G Q+HG++I FE D V +L
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L AR L + + + ++W +++GY +G EA LFN M V +
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
A + S+L +L + KEVH +I R+
Sbjct: 317 FASFLPSILESGSL-------------------------------RHCKEVHSYIVRHRV 345
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++++ +AL+D+Y K G++ AR F Q + D A+++GY G + +A+ +F
Sbjct: 346 PFDVYLKSALIDVYFKGGDVEMARKIF-QQNILVDVAVCTAMISGYVLHGLNIDAINTFR 404
Query: 468 EMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+ E + T ++L ACA +++L+ GK++HC +++ E V A+ ++Y KC
Sbjct: 405 WLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCG 464
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
L+ A F+ S D + NSMI F N + A+++F M G K D +
Sbjct: 465 RLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 223/443 (50%), Gaps = 35/443 (7%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS-LVDAYGKCMVMTDARRMFDDIQN 206
++ R+ ++ + ++Q+H ++ G G+V SS ++ Y C DA +F +++
Sbjct: 16 SLFRACSDASMVQQARQVHTQVIVGGM-GDVCAPSSRVLGLYVLCGRFRDAGNLFFELEL 74
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+ A+ WN ++R + G A++ +FKML ++ P +TF + AC L++ M +
Sbjct: 75 RYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVV 134
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H + F D + + ++++ YA +G I
Sbjct: 135 HDTARSLGFHVD-------------------------------LFAGSALIKLYADNGYI 163
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
R+AR +F+E+P R+ I WN ML GY +S + A+ MR + ++ VT IL++C
Sbjct: 164 RDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSIC 223
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A G ++HG + + + + V+N L+ MY KCGNL AR F M Q D V+W
Sbjct: 224 ATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQ-TDTVTW 282
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
N ++ GY + G ++EA F+ M +P TF + L + SL K++H +++R
Sbjct: 283 NGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVR 342
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ +V + AL++VY K +E A ++F+++ +DV +C +MI G+ + +A+
Sbjct: 343 HRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINT 402
Query: 566 FGLMKKEGIKPDHITFHGILLAC 588
F + +EG+ + +T +L AC
Sbjct: 403 FRWLIQEGMVTNSLTMASVLPAC 425
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 2/277 (0%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y + GR R+A LF E+ R + WN M+ G + AL F F M + D+ T
Sbjct: 56 YVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTF 115
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ C GL+ + + VH + ++F +AL+ +Y G +R AR F ++
Sbjct: 116 PYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPL 175
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R D + WN +L GY + G + A+ +F EM+ + + T+ +L+ CA + G Q
Sbjct: 176 R-DTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQ 234
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H VI + +E + LV +Y+KC L YA ++F D + N +I G+ N
Sbjct: 235 LHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGF 294
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
EA +F M G+KPD +TF L + + G+++
Sbjct: 295 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLR 331
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 147/308 (47%), Gaps = 7/308 (2%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + CA+ A+ ++L +++ V + + + Y KCG LD A F M +
Sbjct: 419 ASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD 478
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
RD WN+M+ +++QNG P ++LF M SG + ++ ++ L ++A L K++
Sbjct: 479 RDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEM 538
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG +++ F + + S+L+D Y KC + A +F+ + KN VSWN I+ Y G
Sbjct: 539 HGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCP 598
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGS 284
+E + ++ +MLR I P + TF + AC EG+ H + +
Sbjct: 599 RECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYAC 658
Query: 285 LTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+ ++Y + GR+ +A + P + W +++ + G + A+ + R+++
Sbjct: 659 MVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAK-----LASRHLLE 713
Query: 344 WNAMLAGY 351
+ +GY
Sbjct: 714 LDPKNSGY 721
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 118/283 (41%), Gaps = 5/283 (1%)
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ + T D L + C+ S ++ ++VH + S+ +L +Y CG
Sbjct: 1 MAKPETLDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCG 60
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
R A F+++ + R + WN ++ G G + A+ + +M P K+TF ++
Sbjct: 61 RFRDAGNLFFEL-ELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 119
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
AC ++++ +H + +++ AL+++Y + A RVF E D I
Sbjct: 120 KACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTI 179
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD-S 603
+ N M+ G+ + A+ F M+ + +T+ IL C GN Q
Sbjct: 180 LWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLV 239
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ + PQ+ + ++ +Y + G + N MP TV
Sbjct: 240 IGSGFEFDPQVAN--TLVAMYSKCGNLLYARKLFNTMPQTDTV 280
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 292/573 (50%), Gaps = 37/573 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I YGKCG LD+A LFD+MPE++ SWN+++ +++NGF F +
Sbjct: 245 LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
Query: 137 SG--VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
SG + + T +L + E + V +HG+ VK G +++ ++L+D Y KC +
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL 364
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLN-FTFANALF 252
++A +F I+NK+ VSWN ++ Y G E + KM + E++ +N T N L
Sbjct: 365 SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
AC S +HG ++ F+ +++ + Y KCG L
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL----------------- 467
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
A +F M ++V SWNA++ G+ ++ +ALDF F M +
Sbjct: 468 --------------VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGI 513
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D ++ +L C L ++ GKE+HGF+ RN N FV+ +LL +Y C R
Sbjct: 514 LPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT 573
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
+F M + + V WNA+L+GY++ EA++ F +M + P + ++L AC+ +S
Sbjct: 574 YFETMGDK-NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLS 632
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L GK++HCF ++N + +L+++Y K L ++ R+F + +V N MI
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
GF + +G +A+E+F MK+ +PD TF G+L AC H G V L + M+ Y +
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLE 752
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
P+LEHY C+I + R G + E +F+N MP P
Sbjct: 753 PELEHYACVIDMLGRAGRLNEALNFINEMPEEP 785
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/546 (27%), Positives = 267/546 (48%), Gaps = 35/546 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN-RAIECYGKCGNLDDARGLFDEMPER 106
L Q C K + RKL+ L F+LN R I Y CG ++R +FD + +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WNA++ Y +N + FL++ + + + T+ ++++ + ++ + K +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG+ VK G ++ + ++++ YGKC + +A +FD + +N +SWN ++R + G
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 226 KEAVVMFFKMLR--EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA F +L + + P T L CS + GM IHG+ +K+ + +V
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG L +A L + + ++++SW S++ Y+ G + E +L +M
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM------- 405
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W M + ++++VT+ +L C SE+ + +HG+
Sbjct: 406 W----------------------MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSL 443
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R+ + ++NA + Y KCG+L A F+ M+ + SWNAV+ G+A+ G +A+
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS-SWNAVIGGHAQNGDPIKAL 502
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ EM + P F+ +LL AC + L+ GK+IH FV+RN E+N +L+ +Y
Sbjct: 503 DFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLY 562
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
C Y F+ + + N+M+ G+ NE EAL +F M +G++PD I
Sbjct: 563 FHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIA 622
Query: 583 GILLAC 588
IL AC
Sbjct: 623 SILGAC 628
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + Y C R F+ M +++ WNAML Y+QN P L LF M
Sbjct: 553 FVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSD 612
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ ++I A++L + ++ LG+ K++H +K + + SL+D Y K + +
Sbjct: 613 GLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHS 672
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+R+F+ + K SWNV++ + V G G +AV +F M R D +P FTF L AC
Sbjct: 673 QRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHA 732
Query: 258 SSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW 313
EG+ + + E + + +M + GRL +A +++ P+E + W
Sbjct: 733 GLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 483 LLAACANISSLEQGKQI-HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
LL C ++E G+++ + + + + V L+ +Y+ C + VF +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 542 DVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
++ N+++ G+ NE EA+ F L+ +PD+ TF ++ AC + ++ L +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG-KS 231
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
M K G+I L MI LY + G++ E + ++MP
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 197/684 (28%), Positives = 322/684 (47%), Gaps = 29/684 (4%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
N ++ ++ + TL S L+ P + + L C S+++ R + + ++
Sbjct: 171 NAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSAL-NACIGSRSLSNGRLIHALVLE 229
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
V L + YG+CG L+ AR +F MPER+ SWNAM+ + T N +EL
Sbjct: 230 RGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIEL 289
Query: 131 FLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
F M V ++++ VL + L +++H +I +R + + ++LV YG
Sbjct: 290 FKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYG 349
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
+C + DA R+F ++ ++ VSWN ++ Y +G +E V +F +M E + P TF
Sbjct: 350 RCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLM 409
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
AL AC+ + G +H + ++ F V + +Y C + L
Sbjct: 410 ALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSL------- 462
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+V+G +F M R+VISWN M+ GY ++ AL M
Sbjct: 463 ----MEVVAG------------IFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLL 506
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI--HRNDYSSNIFVSNALLDMYRKCGNL 427
+QVT +L+VC + ++ G+ +H + + SS+ V+ A+++MY KCG L
Sbjct: 507 EGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGEL 566
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAA 486
+AR F S R + SWN++++ YA G++E+A M+ E P + TF TLL A
Sbjct: 567 DTARHLFEDTSHR-NLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNA 625
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C ++ GK IH +I + E + V ALV Y+KC L+ A +F DV+
Sbjct: 626 CVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSW 685
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
N +I GF HN REAL+ LM+++G++PD ITF IL A H G ++ F SM
Sbjct: 686 NGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAV 745
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+ + +EHY CMI L R G + + E FV+ M + C +G +
Sbjct: 746 DHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERAK 805
Query: 667 WAARRLNELNPWAPFQFKITTNRF 690
A + E+NP + +N +
Sbjct: 806 RVAGSIVEMNPQHSSAYVALSNLY 829
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 266/556 (47%), Gaps = 45/556 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA L + C S A+ + R++ ++ +F NR + Y +C +LD+AR +FD M
Sbjct: 1 YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELGVS 162
ERD SW AM+ AY Q G + L+LF +M S + N++T+ +L + S E LE G
Sbjct: 61 ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDG-- 118
Query: 163 KQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
KQ+H + +V + ++++ Y KC A +F +++ ++ +SWN +
Sbjct: 119 KQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAE 178
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+G+ + + M E + P TF +AL AC S G IH ++++ EGD V+
Sbjct: 179 SGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVL 238
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY +CG LE AR + + ERN++SW ++V+ ++ EA ELF M
Sbjct: 239 GTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRM----- 293
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
M + T+ V+ +LN + G+ +H
Sbjct: 294 ---------------------VAVAMVEPTR----VSFITVLNAVTTPEALAEGRRIHAM 328
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I S I V+NAL+ MY +CG + A F M +RRD VSWNA+++ YA+ G + E
Sbjct: 329 IQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAM-ERRDLVSWNAMISAYAQSGLARE 387
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ F M+ E P + TF L ACA I L+ G+ +H + + + + A +
Sbjct: 388 VVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMH 447
Query: 521 VY--------TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+Y + +E +F+ ++ DVI N+MI G+ AL +F M E
Sbjct: 448 LYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLE 507
Query: 573 GIKPDHITFHGILLAC 588
GI+ + +TF +L C
Sbjct: 508 GIRGNQVTFMSLLSVC 523
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 168/345 (48%), Gaps = 15/345 (4%)
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
D+R++ +V+ Y + EAR++F+ M ER+V+SW AM++ Y ++ ++ALD
Sbjct: 27 HADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDL 86
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR-NDYSSNIFVSNALLDMYR 422
M ++ D ++VT +L C ++ GK++H + S++ V+NA++ MYR
Sbjct: 87 FTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYR 146
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
KC A F +M +R D +SWN + A G + MQ E P K TF
Sbjct: 147 KCERADLAMAVFSEMRER-DLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFV 205
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+ L AC SL G+ IH V+ E +VV ALV +Y +C CLE A +F
Sbjct: 206 SALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPER 265
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLA-----CIHEGNVK 595
+V+ N+M+ N EA+E+F M ++P ++F +L A + EG
Sbjct: 266 NVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEG--- 322
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+ +M + ++ Q+E ++ +Y R G + + E + M
Sbjct: 323 ---RRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAM 364
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/658 (27%), Positives = 307/658 (46%), Gaps = 39/658 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +L L CA+ ++ R L + L+ + + + CY G+L AR
Sbjct: 20 PHGGALLHRLLPACATLPSL---RALHARLLAHGLLRALRARTKLLSCYAALGDLASARR 76
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ--ITYANVLRSSAEE 156
+ DE P D ++ LG + G L L M A+ + + L++S
Sbjct: 77 VLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRS 136
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ ++LH VK G ++ + LVD Y K + +AR++FD I +N VSW ++
Sbjct: 137 ADFRYGRRLHCNAVKAGGADGFVM-NCLVDMYAKAGDLENARKVFDRILGRNVVSWTSML 195
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
L G +E + +F +M E + P +T A+ L AC+ L S ++G +HG +IK
Sbjct: 196 SGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMV 255
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ + ++ +MYVKCG +EDAR L D+ +++ WT+++ GY +G +A LF++
Sbjct: 256 FNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDK 315
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+++ + VT+ +L+ A L + +G+
Sbjct: 316 KFVHIVP-------------------------------NSVTIATVLSASAQLRNLSLGR 344
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H + N V NAL+DMY KC L A F ++S +D V+WN+++ GY
Sbjct: 345 LIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISN-KDVVTWNSLIAGYVEN 403
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
EA+ FS+M+ + + P + L+AC + L GK H + ++ + NV
Sbjct: 404 DMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVN 463
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+ +Y KC L A RVF E S + + +MI G+ ++++ M K+ I+
Sbjct: 464 TALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQ 523
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ + F IL C H G V + FDSM + I P ++HY CM+ + R G ++E +
Sbjct: 524 PNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALE 583
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDRY 693
F+ +MP + + C+ + GE A R+ L+P P + + +N + Y
Sbjct: 584 FIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSY 641
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 186/651 (28%), Positives = 318/651 (48%), Gaps = 37/651 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ CA S A L ++ + +F+ + I Y K + +AR LFD+MP
Sbjct: 44 YSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMP 103
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS----GVSANQITYANVLRSSAEELELG 160
ERD SWN+M+ Y+Q G LF M +S + + T A VL++
Sbjct: 104 ERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSR 163
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ K +HG VK GF ++ + S V Y KC ++ A FD I+NK+ V+WN ++ Y
Sbjct: 164 IGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYA 223
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+EA+ +F++M E +P + TF L A + +S G H ++K+ D
Sbjct: 224 QNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVF 283
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L +MY K +ED ER F EM +RN
Sbjct: 284 VATALVDMYSKFYDIEDV--------ER-----------------------AFGEMSKRN 312
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
++S+NA++ GY+ ++EAL ++ + D T + + C+ S + G +VH
Sbjct: 313 LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHV 372
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ S++ V N++++ Y KCG SA F ++ R + V W +++G+A+ G+ E
Sbjct: 373 HSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCWAGIISGFAQNGEGE 431
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A+ F +M ++ + +F+ +++ A ++ +++EQG+ +H V+++ + + A++
Sbjct: 432 KALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVI 491
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y+KC +E A +VF +V+ NSMI G+ N +EAL +F M GI P +
Sbjct: 492 DMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAV 551
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF GIL AC H G V+ F++ M YGI P +EH CM+ L R GY++E E F+
Sbjct: 552 TFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLS 611
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F+ + + C + + +G AA+ L P + +N +
Sbjct: 612 SSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIY 662
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 151/544 (27%), Positives = 263/544 (48%), Gaps = 38/544 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M E + W + + + G + L FL M +G+ N ITY+ + + A+ ++
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
LH LI+K+GF + + S L+ Y K + +AR +FDD+ ++ VSWN ++ Y
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 223 GNGKEAVVMFFKMLR--EDIRPL--NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G +EA +F M+ E+ + L +FT A L AC L G +HG +KI F+ D
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V GS MY KCG L+ A DQ + ++I++W ++++GYA + EA ELF +M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME- 239
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
L G+ + T +L +S+ +G+
Sbjct: 240 ---------LEGFKP---------------------NDTTFCCVLKASTAMSDSAVGRCF 269
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + + S ++FV+ AL+DMY K ++ F +MS +R+ VS+NA++TGY+ G+
Sbjct: 270 HAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMS-KRNLVSFNALITGYSLMGK 328
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EEA+ +S++Q E P FTF L ++C+ S++ +G Q+H ++ + +V +
Sbjct: 329 YEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNS 388
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
+V Y+KC + A+ F+ + + + +I GF N G +AL F M+K K D
Sbjct: 389 IVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTD 448
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+ ++ A V+ + K G+ + +I +Y + G +++ +
Sbjct: 449 EFSSSSVIKAVSSWAAVEQGRHLHAHVM-KSGLDCTIYVGSAVIDMYSKCGMVEDAQKVF 507
Query: 638 NRMP 641
+ MP
Sbjct: 508 SVMP 511
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 187/626 (29%), Positives = 304/626 (48%), Gaps = 75/626 (11%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P + N+AI + + G+ D A +F+ MP R S+NAM+ Y +N LF M
Sbjct: 47 PDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM 106
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ + + +R+ LG +++L L+ ++ +V+ +SL+ Y + +
Sbjct: 107 PERDLFSWNVMLTGYVRNC----RLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYV 158
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-----FTFAN 249
+AR +FD++ KN++SWN ++ Y+ G +EA ++F D+ N F
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKK 218
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L +L ++ M + D + ++ Y + G L AR L D+ R+
Sbjct: 219 KLGDARWL---FDKMPVR----------DAISWNTMISGYAQGGGLSQARRLFDESPTRD 265
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ +WT++VSGY +G + EA+ F+EMPE+N +S+NAM+AGY +
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQ---------------- 309
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS----NIFVSNALLDMYRKCG 425
TK +D I R + S NI N ++ Y + G
Sbjct: 310 -TKKMD--------------------------IARELFESMPCRNISSWNTMITGYGQIG 342
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLL 484
++ AR +F M QR D VSW A++ GYA+ G EEA+ F E++ + ++ TF L
Sbjct: 343 DIAQARKFFDMMPQR-DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ CA+I++LE GKQIH ++ Y AL+ +Y KC ++ A F+ DV+
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+M+ G+ + GR+AL VF MK G+KPD IT G+L AC H G + ++F SM
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSM 521
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
YG+IP +HY CMI L R G ++E +D + MPF P + R +G L
Sbjct: 522 TKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581
Query: 665 GEWAARRLNELNPWAPFQFKITTNRF 690
GE AA + ++ P + + +N +
Sbjct: 582 GEKAAEMVFKMEPQNSGMYVLLSNLY 607
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 227/438 (51%), Gaps = 22/438 (5%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
L NL P +F N + Y + L DAR LFD MPE+D SWN++L Y QNG+
Sbjct: 98 LARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157
Query: 124 PGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
E+F +M + +S N + A V EE L+ + ++I +
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA---------CLLFESKSDWDLISWN 208
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
L+ + + + DAR +FD + ++A+SWN ++ Y G +A +F D P
Sbjct: 209 CLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF------DESP 262
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDF-EGDDVVLGSLTEMYVKCGRLEDARGL 301
F ++ + GM + E ++V ++ YV+ +++ AR L
Sbjct: 263 TRDVFTWTAMVSGYVQN---GMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL 319
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
+ RNI SW ++++GY G I +AR+ F+ MP+R+ +SW A++AGY +S ++EAL
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ +++ + +++ T G L+ CA ++ +++GK++HG + Y + FV NALL MY
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG++ A F + + +D VSWN +L GYAR G +A+T F M+ +P + T
Sbjct: 440 FKCGSIDEANDTFEGI-EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498
Query: 481 ETLLAACANISSLEQGKQ 498
+L+AC++ L++G +
Sbjct: 499 VGVLSACSHTGLLDRGTE 516
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 28/355 (7%)
Query: 59 VEARKLE--SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
V+ +K++ L P + N I YG+ G++ AR FD MP+RD SW A++
Sbjct: 308 VQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
Y Q+G L +F+++ G S N+ T+ L + A+ L + KQ+HG VK G+
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ ++L+ Y KC + +A F+ I+ K+ VSWN ++ Y G G++A+ +F M
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYV 290
++P T L ACS + G+ G D V+ + + ++
Sbjct: 488 TAGVKPDEITMVGVLSACS-----HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLG 542
Query: 291 KCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNA 346
+ GRLE+A+ L+ + P + SW +++ I G +A E+ +M +N +
Sbjct: 543 RAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 602
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ Y S W +A MR +DI + G S +++ ++H F
Sbjct: 603 LSNLYAASGRWVDADK----MRSKMRDIG-------VQKVPGYSWVEVQNKIHTF 646
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 187/626 (29%), Positives = 304/626 (48%), Gaps = 75/626 (11%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P + N+AI + + G+ D A +F+ MP R S+NAM+ Y +N LF M
Sbjct: 47 PDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM 106
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ + + +R+ LG +++L L+ ++ +V+ +SL+ Y + +
Sbjct: 107 PERDLFSWNVMLTGYVRN----CRLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYV 158
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-----FTFAN 249
+AR +FD++ KN++SWN ++ Y+ G +EA ++F D+ N F
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKK 218
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L +L ++ M + D + ++ Y + G L AR L D+ R+
Sbjct: 219 KLGDARWL---FDKMPVR----------DAISWNTMISGYAQGGGLSQARRLFDESPTRD 265
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ +WT++VSGY +G + EA+ F+EMPE+N +S+NAM+AGY +
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQ---------------- 309
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS----NIFVSNALLDMYRKCG 425
TK +D I R + S NI N ++ Y + G
Sbjct: 310 -TKKMD--------------------------IARELFESMPCRNISSWNTMITGYGQIG 342
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLL 484
++ AR +F M QR D VSW A++ GYA+ G EEA+ F E++ + ++ TF L
Sbjct: 343 DIAQARKFFDMMPQR-DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCAL 401
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ CA+I++LE GKQIH ++ Y AL+ +Y KC ++ A F+ DV+
Sbjct: 402 STCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVV 461
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+M+ G+ + GR+AL VF MK G+KPD IT G+L AC H G + ++F SM
Sbjct: 462 SWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSM 521
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
YG+IP +HY CMI L R G ++E +D + MPF P + R +G L
Sbjct: 522 TKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTEL 581
Query: 665 GEWAARRLNELNPWAPFQFKITTNRF 690
GE AA + ++ P + + +N +
Sbjct: 582 GEKAAEMVFKMEPQNSGMYVLLSNLY 607
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 227/438 (51%), Gaps = 22/438 (5%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
L NL P +F N + Y + L DAR LFD MPE+D SWN++L Y QNG+
Sbjct: 98 LARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157
Query: 124 PGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
E+F +M + +S N + A V EE L+ + ++I +
Sbjct: 158 VDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA---------CLLFESKSDWDLISWN 208
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
L+ + + + DAR +FD + ++A+SWN ++ Y G +A +F D P
Sbjct: 209 CLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF------DESP 262
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDF-EGDDVVLGSLTEMYVKCGRLEDARGL 301
F ++ + GM + E ++V ++ YV+ +++ AR L
Sbjct: 263 TRDVFTWTAMVSGYVQN---GMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL 319
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
+ RNI SW ++++GY G I +AR+ F+ MP+R+ +SW A++AGY +S ++EAL
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ +++ + +++ T G L+ CA ++ +++GK++HG + Y + FV NALL MY
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG++ A F + + +D VSWN +L GYAR G +A+T F M+ +P + T
Sbjct: 440 FKCGSIDEANDTFEGI-EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITM 498
Query: 481 ETLLAACANISSLEQGKQ 498
+L+AC++ L++G +
Sbjct: 499 VGVLSACSHTGLLDRGTE 516
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 28/355 (7%)
Query: 59 VEARKLE--SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
V+ +K++ L P + N I YG+ G++ AR FD MP+RD SW A++
Sbjct: 308 VQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIA 367
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
Y Q+G L +F+++ G S N+ T+ L + A+ L + KQ+HG VK G+
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT 427
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ ++L+ Y KC + +A F+ I+ K+ VSWN ++ Y G G++A+ +F M
Sbjct: 428 GCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMK 487
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYV 290
++P T L ACS + G+ G D V+ + + ++
Sbjct: 488 TAGVKPDEITMVGVLSACS-----HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLG 542
Query: 291 KCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNA 346
+ GRLE+A+ L+ + P + SW +++ I G +A E+ +M +N +
Sbjct: 543 RAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 602
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ Y S W +A MR +DI + G S +++ ++H F
Sbjct: 603 LSNLYAASGRWVDADK----MRSKMRDIG-------VQKVPGYSWVEVQNKIHTF 646
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 263/498 (52%), Gaps = 33/498 (6%)
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
M A +F I ++ ++N+++R + + + EA+++F +M ++P FTF L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS L + EG QIH +I+K F V +L MY CG +E
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVE----------------- 176
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
AR +F+EM ERNV +WN+M AGYT+S W+E + M +
Sbjct: 177 --------------VARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIR 222
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+VTL +L C L+++++G+ ++ ++ N + +L+DMY KCG + +AR
Sbjct: 223 FDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRL 282
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISS 492
F QM RRD V+W+A+++GY++ + EA+ F EMQ P++ T ++L++CA + +
Sbjct: 283 FDQM-DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA 341
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
LE GK +H F+ + ++ V AL++ Y KC +E +I VF + +V+ +I G
Sbjct: 342 LETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQG 401
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
N +G++ALE F LM ++ ++P+ +TF G+L AC H G V F SM +GI P
Sbjct: 402 LASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEP 461
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
++EHY CM+ + R G ++E F+ MP P + R + C+ + +GE + ++L
Sbjct: 462 RIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL 521
Query: 673 NELNPWAPFQFKITTNRF 690
L P + + +N +
Sbjct: 522 IILEPTHSGDYILLSNIY 539
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 235/447 (52%), Gaps = 34/447 (7%)
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++D A +F ++ E D ++N M+ +T P + LF +M+ + V ++ T+ +L+
Sbjct: 73 SMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK 132
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ L +Q+H LI+K GF + ++++L+ Y C + ARR+FD++ +N +
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN + Y +GN +E V +F +ML DIR T + L AC L+ G I+ +
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ +G+ ++ SL +MY KCG+++ AR L DQ D R++++W++++SGY+ + R REA +
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF+EM + N+ D +++T+ IL+ CA L
Sbjct: 313 LFHEMQKANI-------------------------------DPNEITMVSILSSCAVLGA 341
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ GK VH FI + + + AL+D Y KCG++ S+ F +M ++ +SW ++
Sbjct: 342 LETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV-KNVLSWTVLIQ 400
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYE 509
G A GQ ++A+ F M + P+ TF +L+AC++ +++G+ + + R+ E
Sbjct: 401 GLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIE 460
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFK 536
+ G +V++ + +E A + K
Sbjct: 461 PRIEHYGCMVDILGRAGLIEEAFQFIK 487
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 231/486 (47%), Gaps = 26/486 (5%)
Query: 5 AATILKNILSKSSP-----------KPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCA 53
A +I + I SP K +P + + H S +P ++ + + ++C+
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFT-FPCILKVCS 135
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
+A+ E ++ + ++ F+ N I Y CG ++ AR +FDEM ER+ +WN+
Sbjct: 136 RLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNS 195
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M YT++G ++LF +M + +++T +VL + +L + + ++ + ++G
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
GN L +SLVD Y KC + ARR+FD + ++ V+W+ ++ Y A +EA+ +F
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M + +I P T + L +C+ L + G +H I K + + +L + Y KCG
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCG 375
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLA 349
+E + + + +N++SWT ++ G A +G+ ++A E F M E+NV +++ +L+
Sbjct: 376 SVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLS 435
Query: 350 GYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGKEVHGFIHRND 406
+ + L E D FV + R + G ++++ AGL E E FI
Sbjct: 436 ACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIE-----EAFQFIKNMP 490
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQSEEAMT 464
N + LL + N+ Q+ S + +L YA G+ E+A+
Sbjct: 491 IQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALK 550
Query: 465 SFSEMQ 470
EM+
Sbjct: 551 VRGEMK 556
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/633 (28%), Positives = 292/633 (46%), Gaps = 84/633 (13%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QLCA K+I + R++ S + + L ++ + Y CG+L + R +FD++
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVA 163
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
WN ++ Y + G +L LF M ELG+ +
Sbjct: 164 NEKVFLWNLLMNGYAKIGNFRESLSLFKRMR----------------------ELGIRR- 200
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+ AR++FD++ +++ +SWN ++ Y+ G
Sbjct: 201 -----------------------------VESARKLFDELGDRDVISWNSMISGYVSNGL 231
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++ + +F +ML I T + + CS G +HG IK F + +
Sbjct: 232 SEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNC 291
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY K SG + A ++F M ER+V+SW
Sbjct: 292 LLDMYSK-------------------------------SGNLNSAIQVFETMGERSVVSW 320
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+M+AGY R L ++ M K D T+ IL+ CA ++ GK+VH +I
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE 380
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N S++FVSNAL+DMY KCG++ A F +M Q +D VSWN ++ GY++ EA+
Sbjct: 381 NKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEM-QVKDIVSWNTMIGGYSKNSLPNEALN 439
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ+ ++P+ T +L ACA++++LE+G++IH ++RN + ++ ALV++Y K
Sbjct: 440 LFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 499
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L A +F D++ MI G+ + G EA+ F M+ GI+PD ++F I
Sbjct: 500 CGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISI 559
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G + FF+ MR I P+ EHY C++ L R G + + F+ MP P
Sbjct: 560 LYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEP 619
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + CR L E A + EL P
Sbjct: 620 DATIWGALLCGCRIYHDVKLAEKVAEHVFELEP 652
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 205/396 (51%), Gaps = 23/396 (5%)
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
+N+ + R+ GN + A+ + + + D+ T+ + L C+ L S +G +IH +I
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQ 128
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE--- 328
D E D V+ L MYV CG L + R + D+ + W +++GYA G RE
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLS 188
Query: 329 ---------------ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
AR+LF+E+ +R+VISWN+M++GY + L ++ LD M +
Sbjct: 189 LFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGIN 248
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D T+ ++ C+ + +G+ +HG+ + + + ++N LLDMY K GNL SA I
Sbjct: 249 TDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSA-IQ 307
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
++ R VSW +++ GYAR G S+ ++ F EM+ E P FT T+L ACA
Sbjct: 308 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL 367
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
LE GK +H ++ N + ++ AL+++Y KC + A VF E D++ N+MI G
Sbjct: 368 LENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ N EAL +F M+ KP+ IT IL AC
Sbjct: 428 YSKNSLPNEALNLFVEMQYNS-KPNSITMACILPAC 462
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 10/319 (3%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ CA + + + + + + +F+ N ++ Y KCG++ DA +F EM +D
Sbjct: 358 ILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKD 417
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN M+G Y++N P L LF++M ++ N IT A +L + A L +++HG
Sbjct: 418 IVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHG 476
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I++ GF + + ++LVD Y KC + AR +FD I K+ VSW V++ Y + G G E
Sbjct: 477 HILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSE 536
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFEGDDVVLGSLT 286
A+ F +M I P +F + L+ACS EG ++ E +
Sbjct: 537 AIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIV 596
Query: 287 EMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARE----LFNEMPERNV 341
++ + G L A + P E + W +++ G I ++ A + +F PE
Sbjct: 597 DLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENT- 655
Query: 342 ISWNAMLAG-YTRSLLWKE 359
+ +LA Y + W+E
Sbjct: 656 -GYYVLLANIYAEAEKWEE 673
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 49/269 (18%)
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR- 431
D++ T +L +CA L I+ G+ +H I ND + + + L+ MY CG+LR R
Sbjct: 98 DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRR 157
Query: 432 -----------IW-------------------FYQMSQ-----------------RRDKV 444
+W F +M + RD +
Sbjct: 158 IFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVI 217
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFV 503
SWN++++GY G SE+ + F +M + T +++A C+N L G+ +H +
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYA 277
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
I+ + + L+++Y+K L AI+VF+ V+ SMI G+ ++
Sbjct: 278 IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 337
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEG 592
+F M+KEGI PD T IL AC G
Sbjct: 338 RLFHEMEKEGISPDIFTITTILHACACTG 366
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 184/647 (28%), Positives = 305/647 (47%), Gaps = 49/647 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL-NRAIECYGKCGNLDDARGLFDEM 103
YA L Q CA ++A+ E RK+ S V P +L N + Y C + DA+ FD +
Sbjct: 46 YARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDAL 105
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+R+ SW ++ A+ +G TL M GV + +T+ L S + L
Sbjct: 106 EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGI 165
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVA 222
++H ++V + + ++L++ Y KC ++ A+R+F ++ +N +SW+++ + +
Sbjct: 166 RIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALH 225
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
GN EA+ F ML I+ L ACS + +G IH I FE + +V
Sbjct: 226 GNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVA 285
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDE--RNIISWTSIVSGYAISGRIREARELFNEMPERN 340
++ MY +CG +E+AR + D DE R+++SW ++S Y + R ++A +L+ M R
Sbjct: 286 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLR- 344
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
D+VT +L+ C+ ++ +G+ +H
Sbjct: 345 ---------------------------------ADKVTYVSLLSACSSAEDVGLGRVLHK 371
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
I ++ N+ V NAL+ MY KCG+ AR F +M Q R +SW +++ Y RR
Sbjct: 372 QIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQ-RSIISWTTIISAYVRRRLVA 430
Query: 461 EAMTSFSEM--------QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
EA F +M +P F T+L ACA++S+LEQGK + +
Sbjct: 431 EACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDK 490
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
A+V +Y KC +E R+F S DV + N+MI + + EAL++F M+
Sbjct: 491 AVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEM 550
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY-GIIPQLEHYECMIKLYCRYGYM 630
EG++PD +F ILLAC H G +F SM +Y + ++H+ C+ L R G +
Sbjct: 551 EGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRL 610
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
KE E+F+ ++P P + CR + + A +L L P
Sbjct: 611 KEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEP 657
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 173/381 (45%), Gaps = 35/381 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C+S++ + R L +V V + N + Y KCG+ +AR +FD+M
Sbjct: 350 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 409
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELF---LDMNHSG----VSANQITYANVLRSSAEEL 157
+R SW ++ AY + LF L++ +G V + + + +L + A+
Sbjct: 410 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 469
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNVIV 216
L K + G + + +++V+ YGKC + + RR+FD + ++ V WN ++
Sbjct: 470 ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMI 529
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG--VIIKID 274
Y G EA+ +F++M E +RP +F+F + L ACS + G++ G +
Sbjct: 530 AVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS-----HTGLEDQGKSYFTSMT 584
Query: 275 FEGDDVV-----LGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIRE 328
E +V G + ++ + GRL++A L++ P + + ++WTS+++ ++
Sbjct: 585 TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKR 644
Query: 329 ARELFNEM---PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
A+E+ N++ R + A+ Y W M + ++
Sbjct: 645 AKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKER--------- 695
Query: 386 CAGLSEIKMGKEVHGFIHRND 406
G+S I++GK +H F +D
Sbjct: 696 --GVSTIEIGKYMHDFATGDD 714
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 128/294 (43%), Gaps = 7/294 (2%)
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSS 409
+T SL + V + K + T +L CA + G+++H + N
Sbjct: 18 HTASLDRSDIASAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPG 77
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
N+ + N ++ MY C + A+ F + Q R+ SW ++ +A GQS+E + + M
Sbjct: 78 NLILGNHIVSMYAHCDSPGDAKAAFDALEQ-RNLYSWTGLVAAFAISGQSKETLRALERM 136
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ + RP TF T L +C + SL G +IH V+ + EI+ AL+ +Y KC L
Sbjct: 137 RQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSL 196
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGR--EALEVFGLMKKEGIKPDHITFHGILL 586
+A RVF + +I S++ G H G EAL F M GIK IL
Sbjct: 197 SHAKRVFAKMERTRNVISWSIMAG-AHALHGNVWEALRHFRFMLLLGIKATKSAMVTILS 255
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
AC V+ + S G +L ++ +Y R G ++E + M
Sbjct: 256 ACSSPALVQDG-RLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAM 308
>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
Length = 811
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 282/587 (48%), Gaps = 51/587 (8%)
Query: 84 IECYGKCGNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLEL---FLDMNHSG 138
++ Y KCG+LDDAR +FD+ + + W AM+ Y +G + LEL FL ++
Sbjct: 67 VDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSSEP 126
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ A SSAE L+ G + +H I R + L + LV+ YG+C + AR
Sbjct: 127 PDTVMLLSAITACSSAEFLDDG--RAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRAR 184
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+ F+ I KN VSWNVI+ Y G+ A+ +F +M E + TF + L AC +
Sbjct: 185 KAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVE 244
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ + +IH + E D V SL Y KCG L
Sbjct: 245 AAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLA---------------------- 282
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
EA+ +F+ MP +N ++ +MLA Y + L +EAL+ M + D+VT
Sbjct: 283 ---------EAKRVFDTMPLKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVT 333
Query: 379 LGLILNVCAGLSEIKMGKEVH------GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
L+ C+ + + G+ +H G I + D + + ALL+MY +CG L +A+
Sbjct: 334 FISALDACSSIGALSQGRAIHSRLLVSGIIQQPD----VVLGTALLNMYGRCGVLDAAKS 389
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
F M+ + + ++WNA++ YA+ G +EA+ + M + +P+ TF +L AC+ + +
Sbjct: 390 LFDGMADK-NTITWNALMGSYAQWGYGKEALNLYHSM--DAQPNSLTFLAMLTACSTVGA 446
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L QG+ H + +E V ALV +Y KC LE A+ F + V+ +L
Sbjct: 447 LLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLA 506
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
H+ RE L +F M+ +G+ PD + L AC H G +K +F +M YG+ P
Sbjct: 507 LAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYFTNMIQDYGVSP 566
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
L HY+C++ L CR G + E+ ++ MPF P+ + CR +
Sbjct: 567 TLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTTLLAACRTH 613
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 231/475 (48%), Gaps = 40/475 (8%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S EP + C+S++ + + R + + + + L N + YG+C L
Sbjct: 123 SSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHR 182
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
AR F+++ ++ SWN ++GAY Q G G +ELF M+ GV+A+ +T+ +VL +
Sbjct: 183 ARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGG 242
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
G +++H + G +V + SSLV+AYGKC + +A+R+FD + KN V+ +
Sbjct: 243 VEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSM 302
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG-VIIKID 274
+ Y G G+EA+ ++ +M + + TF +AL ACS + + +G IH +++
Sbjct: 303 LAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGI 362
Query: 275 FEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ DVVLG+ L MY +CG L+ A+ L D ++N I+W +++ YA G +EA L+
Sbjct: 363 IQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLY 422
Query: 334 NEM-PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
+ M + N +++ AM L C+ + +
Sbjct: 423 HSMDAQPNSLTFLAM-----------------------------------LTACSTVGAL 447
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G+ H + + + V AL++MY KCG+L A F ++ +R+ V+W +
Sbjct: 448 LQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKL-ERKTVVTWTVAMLA 506
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
A G+ E + F+EM+ + P L AC++ L++G+ +I++
Sbjct: 507 LAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYFTNMIQD 561
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 198/416 (47%), Gaps = 41/416 (9%)
Query: 179 ILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
++ ++LVD Y KC + DARR+FDD + +K W +V Y + G+ ++A+ ++ + L
Sbjct: 61 LVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFL 120
Query: 237 REDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
P + +A+ ACS +G IH I + + + L MY +C L
Sbjct: 121 SVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKEL 180
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
AR ++ +N++SW I+ YA G A ELF M V +
Sbjct: 181 HRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAA------------ 228
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
D VT +L+ C G+ + +H + + ++FV++
Sbjct: 229 -------------------DAVTFLHVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVAS 269
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
+L++ Y KCG L A+ F M ++ V+ ++L YA+ G EEA+ + EM+ + R
Sbjct: 270 SLVNAYGKCGCLAEAKRVFDTMPL-KNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRK 328
Query: 476 S-KFTFETLLAACANISSLEQGKQIHCFVIRN--CYEINVVCRGALVEVYTKCCCLEYAI 532
+ + TF + L AC++I +L QG+ IH ++ + + +VV AL+ +Y +C L+ A
Sbjct: 329 ADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAK 388
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+F + + I N+++ + G+EAL ++ M + P+ +TF +L AC
Sbjct: 389 SLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHSMDAQ---PNSLTFLAMLTAC 441
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 194/481 (40%), Gaps = 91/481 (18%)
Query: 247 FANALFACSFLSSPY--EGMQIHG-------------VIIKIDFEGDDVVLGSLTEMYVK 291
+++ AC+ L S + +G ++H V + + E DD+V +L +MY K
Sbjct: 13 LVSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVATALVDMYSK 72
Query: 292 CGRLEDARGLLD--QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
CG L+DAR + D D + + WT++VSGYA+ G R+A EL+
Sbjct: 73 CGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQR-------------- 118
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ +++ D V L + C+ + G+ +H I +
Sbjct: 119 ----------------FLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDH 162
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ + N L++MY +C L AR F +++ ++ VSWN ++ YA+ G AM F M
Sbjct: 163 HTHLGNGLVNMYGRCKELHRARKAFEKITA-KNLVSWNVIIGAYAQEGHRGHAMELFQRM 221
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
E TF +L AC + + ++IH + + E +V +LV Y KC CL
Sbjct: 222 DPEGVAADAVTFLHVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCL 281
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A RVF + + SM+ + + G EALE++ M+ +G K D +TF L AC
Sbjct: 282 AEAKRVFDTMPLKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDAC 341
Query: 589 -----------IHE--------------------------GNVKLALQFFDSMRCKYGII 611
IH G + A FD M K I
Sbjct: 342 SSIGALSQGRAIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTIT 401
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
+ ++ Y ++GY KE + + M P + C G G A R
Sbjct: 402 -----WNALMGSYAQWGYGKEALNLYHSMDAQPNSLTFLAMLTACSTVGALLQGRAAHAR 456
Query: 672 L 672
L
Sbjct: 457 L 457
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 132/274 (48%), Gaps = 11/274 (4%)
Query: 52 CASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
C+S A+ + R + S L+ P V L + YG+CG LD A+ LFD M +++
Sbjct: 341 CSSIGALSQGRAIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTI 400
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+WNA++G+Y Q G+ L L+ M+ N +T+ +L + + L + H +
Sbjct: 401 TWNALMGSYAQWGYGKEALNLYHSMD---AQPNSLTFLAMLTACSTVGALLQGRAAHARL 457
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
GF V + +LV+ YGKC + DA F ++ K V+W V + G +E +
Sbjct: 458 APAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETL 517
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS---LT 286
+F +M + + P + ALFACS EG +I+ D+ G L +
Sbjct: 518 RLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYFTNMIQ-DY-GVSPTLAHYDCVV 575
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
++ + G L A L+D P E + ++WT++++
Sbjct: 576 DLLCRTGLLGRAEELIDSMPFEPSAVTWTTLLAA 609
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 180/656 (27%), Positives = 315/656 (48%), Gaps = 45/656 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNL-VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+A L S + EAR+L + L V + L + + Y + G A + D M
Sbjct: 42 HASLLLRLRSCPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGM 101
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVS 162
P R+ +WNA + +G LE + M G V+A+ TY V+++ A LGV
Sbjct: 102 PMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAA---LGVV 158
Query: 163 KQ-------LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+Q + +V+ +V ++ +LVD + KC + +AR +F+ + ++ +W +
Sbjct: 159 EQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAM 218
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + AG+ +A+ +F +M E + A + AC GM +HG ++
Sbjct: 219 IGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGV 278
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D V +L +MY KCG L G+ D+ +F
Sbjct: 279 GDDTCVSNALVDMYCKCGCL----GMADR---------------------------VFWS 307
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ ++V+SW+ ++AGY+++ +++ M + T+ IL + + + G
Sbjct: 308 IGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHG 367
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
KE+HGF RN + + F+ +A +D Y + G++R A I ++ +RD V WN+++ GYA
Sbjct: 368 KEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEI-VLELMPKRDLVIWNSMVAGYAV 426
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G ++ A+ +F +Q RP T ++L C + S L QGK++H +V+R+
Sbjct: 427 NGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSV 486
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL+++Y KCCCLE +F+ + D N++I F + EA+ +F LMK++GI
Sbjct: 487 SNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGI 546
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PD +TF +L +C H G ++ L F+D M Y I P EHY C++ LY R G + +
Sbjct: 547 APDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAW 606
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
FV+ + + +L + CR + + E A+R+ E NP P + +N +
Sbjct: 607 KFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIY 662
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 317/643 (49%), Gaps = 63/643 (9%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+L+A + A+S A V ++L+ FY + P LL A +FD+
Sbjct: 33 ALHAWALKSGAASHAPVA-----NSLINFYSSLPRPLLAAAF-------------AVFDD 74
Query: 103 MP--ERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELEL 159
+P RD SWN++L +++ P L F M + S V + ++A ++A
Sbjct: 75 IPPAARDVASWNSLLNPLSRHR-PLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASA 133
Query: 160 GVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
H L K NV + +SL++ Y K +++DARRMFD + +N+ SW+ +V
Sbjct: 134 PAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAG 193
Query: 219 YLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---ID 274
Y +EA +F ML E F L A S G Q+HG+I+K +D
Sbjct: 194 YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLD 253
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
F V SL MY K G + A + + ERN I+W+++++GYA +G A +F+
Sbjct: 254 FVS---VENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFS 310
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+M AG+T + +F F+ +LN + L + +
Sbjct: 311 QMHA----------AGFTPT-------EFTFVG--------------VLNASSDLGALAV 339
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK+ HG + + + I+V +AL+DMY KCG + A+ F Q+ + D V W A+++G+
Sbjct: 340 GKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE-VDIVLWTAMVSGHV 398
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G+ EEA+T ++ M E PSK T + L ACA I++LE GKQ+H +++ +
Sbjct: 399 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL +Y+KC LE + VF+ DVI NS+I GF N G AL++F MK EG
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
PD+ITF IL AC H G V ++F M YG+ P+L+HY CM+ + R G +KE
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+DF+ + + + R + CR +G +A RL EL
Sbjct: 579 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELG 621
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/602 (29%), Positives = 307/602 (50%), Gaps = 34/602 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + I+ Y + G +D LFD + ++D WN ML Y + G ++ F M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+S N +T+ VL A +L + + QLHGL+V G +++SL+ Y KC DA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F + + V+WN ++ Y+ +G +E++ F++M+ + P TF++ L + S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ QIH I++ D + +L + Y KC RG
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC------RG----------------- 390
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+ A+ +F++ +V+ + AM++GY + L+ ++L+ + K +++
Sbjct: 391 --------VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL IL V L +K+G+E+HGFI + + + + A++DMY KCG + A F ++
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQG 496
S +RD VSWN+++T A+ A+ F +M + L+ACAN+ S G
Sbjct: 503 S-KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K IH F+I++ +V L+++Y KC L+ A+ VFK +++ NS+I ++
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 557 ERGREALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ +++L +F +++K GI+PD ITF I+ +C H G+V ++FF SM YGI PQ E
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L+ R G + E + V MPF P + + CR + L E A+ +L +L
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDL 741
Query: 676 NP 677
+P
Sbjct: 742 DP 743
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 204/426 (47%), Gaps = 35/426 (8%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD--DIQNKNAVSWNVIVRRYL 220
KQ+H ++ G+ + ++ Y C +D +MF D++ + WN I+ ++
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFV 114
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +A+ +FKML + P TF + AC L +F+G D
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK---------------NFKGIDF 159
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +++ + + C N +S++ Y G+I +LF+ + +++
Sbjct: 160 LSDTVSSLGMDC----------------NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ WN ML GY + + +MR + VT +L+VCA I +G ++HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + + N+LL MY KCG A F MS R D V+WN +++GY + G E
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISGYVQSGLME 322
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
E++T F EM P TF +LL + + +LE KQIHC+++R+ +++ AL+
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+ Y KC + A +F + +S+DV++ +MI G+ HN ++LE+F + K I P+ I
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 580 TFHGIL 585
T IL
Sbjct: 443 TLVSIL 448
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 151/625 (24%), Positives = 282/625 (45%), Gaps = 57/625 (9%)
Query: 15 KSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT 74
KS P S+ L +TI P SL L Q C++ + + +++ + L+ +
Sbjct: 19 KSLPLRNSSRFLEETI--------PRRLSL---LLQACSNPNLLRQGKQVHAFLIVNSIS 67
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG--SWNAMLGAYTQNGFPGRTLELFL 132
+ R + Y CG+ D +F + R WN+++ ++ +NG + L +
Sbjct: 68 GDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYF 127
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M GVS + T+ ++++ L + G N + SSL+ AY +
Sbjct: 128 KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG 187
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANAL 251
+ ++FD + K+ V WNV++ Y G ++V+ F ++R D I P TF L
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG-ALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 252 FACSFLSSPYEGMQIHGVII--KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
C+ G+Q+HG+++ +DFEG + SL MY KCGR +DA L +
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++W ++SGY SG + E+ F EM V+
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP-------------------------- 338
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
D +T +L + ++ K++H +I R+ S +IF+++AL+D Y KC +
Sbjct: 339 -----DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA 488
A+ F Q + D V + A+++GY G +++ F + + + P++ T ++L
Sbjct: 394 AQNIFSQCNS-VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 489 NISSLEQGKQIHCFVIRNCYE--INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
+ +L+ G+++H F+I+ ++ N+ C A++++Y KC + A +F+ S D++
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGC--AVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NSMI ++ A+++F M GI D ++ L AC + + M
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM-I 569
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMK 631
K+ + + +I +Y + G +K
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLK 594
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 139/266 (52%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL + I+ Y KC + A+ +F + D + AM+ Y NG +LE+F +
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+S N+IT ++L L L + ++LHG I+K+GF + +++D Y KC M
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ + ++ VSWN ++ R + N A+ +F +M I + + AL AC+
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG +IK D +L +MY KCG L+ A + E+NI+SW SI
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 317 VSGYAISGRIREARELFNEMPERNVI 342
++ G+++++ LF+EM E++ I
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGI 640
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 271/543 (49%), Gaps = 62/543 (11%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+F+ I+N N WN+++R Y+ + A ++ ML + N+T+ + ACS
Sbjct: 31 TRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSI 90
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S +E Q+H ++K+ F+ D V +L + C + DA + ++ + +SW SI
Sbjct: 91 RRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSI 150
Query: 317 VSGYAISGRIREARELFNEMPERNVI-------------------------------SWN 345
++GY G + EA+ ++++MPER++I +W+
Sbjct: 151 LAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 210
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
A++A + ++ +++EA+ M K +D+V L+ CA L + MGK +H +
Sbjct: 211 ALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKI 270
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWF------------------------------Y 435
S I + NAL+ MY KCG++ AR F +
Sbjct: 271 GTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 330
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
+D VSW+++++GYA+ +E + F EMQ +P + T ++++ACA +++LE
Sbjct: 331 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALE 390
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGK +H ++ RN INV+ L+++Y KC C+E A+ VF + N++ILG
Sbjct: 391 QGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLA 450
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N +L++F MKK + P+ ITF G+L AC H G V F SM + I P +
Sbjct: 451 MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNV 510
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+HY CM+ L R G ++E E+ +NRMP P V + C+K+G + +G R+L E
Sbjct: 511 KHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE 570
Query: 675 LNP 677
L P
Sbjct: 571 LQP 573
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 283/570 (49%), Gaps = 50/570 (8%)
Query: 20 PTPSKTLTKT-ISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVF 78
P + TL K+ +S +L +D +Y+ Y L Q C+ ++ EA+++ ++++ V+
Sbjct: 59 PHFAFTLYKSMLSNYLGAD---NYT-YPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVY 114
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+ N I C+ C N+ DA +F+E D SWN++L Y + G
Sbjct: 115 VRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG---------------- 158
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ EE +K ++ + +R ++I +S++ +G ++ +A
Sbjct: 159 --------------NVEE-----AKHIYHQMPER----SIIASNSMIVLFGMRGLVVEAC 195
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++FD++ K+ V+W+ ++ + +EA+ F M + + +AL AC+ L
Sbjct: 196 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 255
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G IH + +KI E + +L MY KCG + AR L D+ ++ISW S++S
Sbjct: 256 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY + A+ +F+ MPE++V+SW++M++GY ++ L+ E L M+ + D+ T
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 375
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L +++ CA L+ ++ GK VH +I RN + N+ + L+DMY KCG + +A FY M
Sbjct: 376 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 435
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
++ +WNA++ G A G E ++ FS M + P++ TF +L AC ++ +++G+
Sbjct: 436 EKGIS-TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQ 494
Query: 498 QIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
H + + + ++I NV G +V++ + L+ A + + +LG C
Sbjct: 495 H-HFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 553
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGIL 585
E G E ++PDH FH +L
Sbjct: 554 KHGDSEMGRRVGRKLIE-LQPDHDGFHVLL 582
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 11/297 (3%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y KC +D+A+ +FD MPE+D SW++M+ Y QN TL LF +M SG
Sbjct: 311 NSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK 370
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ T +V+ + A L K +H I + G NVIL ++L+D Y KC + A +
Sbjct: 371 PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEV 430
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + K +WN ++ + G + ++ MF M + + P TF L AC +
Sbjct: 431 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 490
Query: 261 YEGM-QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
EG + +I + + G + ++ + G+L++A LL++ P ++ +W +++
Sbjct: 491 DEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 550
Query: 319 -----GYAISGRIREARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRK 369
G + GR R R+L P+ + ++ +L+ Y W + L+ +M K
Sbjct: 551 ACKKHGDSEMGR-RVGRKLIELQPDHD--GFHVLLSNIYASKGKWDDVLEIRGMMTK 604
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/616 (28%), Positives = 315/616 (51%), Gaps = 35/616 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
VF+ N + Y KC ++ AR LFD M ER D SWN+++ AY+ NG L LF +M
Sbjct: 45 VFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQ 104
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+GV AN T L++ + + ++H I+K +V + ++LV + + M+
Sbjct: 105 KAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMS 164
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A R+FD++ K+ ++WN ++ + G EA+ F + +++P + + L A
Sbjct: 165 YAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASG 224
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G +IH +K + + + +L +MY KC + A + D+ +++ISWT+
Sbjct: 225 RLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTT 284
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ YA + EA +L ++ + + D+D
Sbjct: 285 VIAAYAQNNCHTEALKLLRKVQTKGM-------------------------------DVD 313
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ +G L C+GL + KEVHG+ + S++ + N ++D+Y CGN+ A F
Sbjct: 314 TMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFE 372
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ + +D VSW ++++ Y G + EA+ F M + P T ++L+A A++S+L
Sbjct: 373 SI-KCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALN 431
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK+IH F+ R + + +LV++Y C LE A +VF + S +++ +MI +
Sbjct: 432 KGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYG 491
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ RG+ A+E+F +M+ + + PDHITF +L AC H G + + ++M+CKY + P
Sbjct: 492 MHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWP 551
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY C++ L R +++E FV M PT + CR + LGE AA++L +
Sbjct: 552 EHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLD 611
Query: 675 LNPWAPFQFKITTNRF 690
L+P +P + + +N F
Sbjct: 612 LDPDSPGSYVLISNVF 627
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 218/460 (47%), Gaps = 35/460 (7%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y+L A L Q C S ++ + ++ V++ N + + + G + A +F
Sbjct: 112 TYTLVAAL-QACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIF 170
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
DE+ E+D +WN+M+ +TQNG L+ F + + + ++++ ++L +S L
Sbjct: 171 DELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLL 230
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
K++H +K N+ + ++L+D Y KC + A +FD + NK+ +SW ++ Y
Sbjct: 231 NGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYA 290
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
EA+ + K+ + + + L ACS L ++HG +K D +
Sbjct: 291 QNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLM 349
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ + ++Y CG + A + + ++++SWTS++S Y +G
Sbjct: 350 MQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNG---------------- 393
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
L EAL +LM++T+ + D +TL IL+ A LS + GKE+HG
Sbjct: 394 ---------------LANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHG 438
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
FI R + N+L+DMY CG+L +A F ++ + V W ++ Y G+ +
Sbjct: 439 FIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFI-CTRSKSLVLWTTMINAYGMHGRGK 497
Query: 461 EAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQI 499
A+ FS M+ + P TF LL AC++ + +GK++
Sbjct: 498 AAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 119/222 (53%), Gaps = 1/222 (0%)
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MR D T +L C + +I G E+HG I + Y S +FV+N+L+ MY KC +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLA 485
+ AR F +M++R D VSWN++++ Y+ GQ EA+ F EMQ + +T L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
AC + S + G +IH ++++ ++V ALV ++ + + YA R+F E D I
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
NSMI GF N EAL+ F ++ +KPD ++ IL A
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAA 222
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF-K 536
FTF +L AC + + +G +IH +I+ Y+ V +LV +Y KC + A ++F +
Sbjct: 11 FTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDR 70
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ DV+ NS+I + N + EAL +F M+K G+ + T L AC KL
Sbjct: 71 MNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
++ ++ K + + ++ ++ R+G M
Sbjct: 131 GMEIHAAI-LKSNQVLDVYVANALVAMHVRFGKM 163
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/637 (28%), Positives = 314/637 (49%), Gaps = 38/637 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L + +++++ ++L ++L+T + + + + Y CG + +AR LFDE+
Sbjct: 24 YQSLLKHYGAAQSLTSTKQLHAHLIT-SGLLSIDIRSVLVATYAHCGYVHNARKLFDELR 82
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSK 163
+R +N M+ Y G +++FL+M S + TY V+++ +E L + +
Sbjct: 83 QRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGR 142
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
LHGL + F ++ + +SL+ Y C + +AR++FD ++ K+ VSWN ++ Y G
Sbjct: 143 VLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNG 202
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
A+V+F +M+ + + + L AC +L G ++HG +++ G +V
Sbjct: 203 FANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LVEEKVLGKKIVSN 261
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG ++ EAR +F+ M ER+V+S
Sbjct: 262 ALVDMYAKCGSMD-------------------------------EARLVFDNMVERDVVS 290
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W +M+ GY + K AL +M+ + VT+ LIL CA L+ +K G+ +HG++
Sbjct: 291 WTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVM 350
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S + V +L+DMY KC N + + R+ V WNA+L+G + EA+
Sbjct: 351 KQRLYSEVAVETSLIDMYAKC-NCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAI 409
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +M E + T +LL A ++ L+ I+ +++R+ + N+ +L+++Y
Sbjct: 410 GLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIY 469
Query: 523 TKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+KC LE A ++F D+ + + +I G+ + G A+ +F M + G+KP+ +T
Sbjct: 470 SKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVT 529
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L +C H G V L F M + IP +HY CM+ L R G M E D + M
Sbjct: 530 FTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTM 589
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
PF P + + C + LGE AAR L EL P
Sbjct: 590 PFMPGHAVWGALLGACVMHENVELGEVAARWLFELEP 626
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 276/605 (45%), Gaps = 72/605 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y+ Y + + C+ + R L + +F+LN + Y CG +++AR
Sbjct: 120 PDNYT-YPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARK 178
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD M E+ SWN M+ Y +NGF L +F M SGV + + +VL + E
Sbjct: 179 VFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKE 238
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L V +++HGL+ ++ G I+ ++LVD Y KC M +AR +FD++ ++ VSW ++
Sbjct: 239 LEVGRRVHGLVEEK-VLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMING 297
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y++ G+ K A+ +F M E +RP + T A L AC+ L++ +G +HG ++K +
Sbjct: 298 YILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSE 357
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL +MY KC L + + + + + W +++SG + EA LF +M
Sbjct: 358 VAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLM 417
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V +I+ T +L L++++ +
Sbjct: 418 EGV-------------------------------EINAATCNSLLPAYGILADLQPVNNI 446
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRG 457
+ ++ R+ + SNI V+ +L+D+Y KCG+L SA F + +D W+ ++ GY G
Sbjct: 447 NSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHG 506
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E A++ F +M Q +P+ TF ++L +C++ ++ G + F++++ I
Sbjct: 507 HGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTI------ 560
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+ D C +LG R E + L+K P
Sbjct: 561 ----------------------PNDDHYTCMVDLLG-----RAGRMDEAYDLIKTMPFMP 593
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP-QLEHYECMIKLYCRYGYMKELED 635
H + +L AC+ NV+L + R + + P +Y + KLY G ++ E+
Sbjct: 594 GHAVWGALLGACVMHENVELGEV---AARWLFELEPGNTGNYVLLAKLYAALGRWEDAEN 650
Query: 636 FVNRM 640
RM
Sbjct: 651 VRQRM 655
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/638 (28%), Positives = 316/638 (49%), Gaps = 35/638 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V ++ L +LC +A E K+ S ++ + V L N + + + GNL DA +
Sbjct: 92 VDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYV 151
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELE 158
F +M ER+ SWN ++G Y + G+ + L+ M GV + T+ VLR+ +
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +++H +V+ G+ ++ + ++L+ Y KC + AR +FD + ++ +SWN ++
Sbjct: 212 LARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G G E + +FF M + P T + + AC L G IH +I F D
Sbjct: 272 YFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SLT+MY+ G +A L + D ++I+SWT+++SGY +N +PE
Sbjct: 332 ISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE-----------YNFLPE 380
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+ A+D +M + + D++T+ +L+ CA L ++ G E+
Sbjct: 381 K--------------------AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + S + V+N L++MY KC + A F+ + R++ +SW +++ G +
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EA+ F +M+ +P+ T LAACA I +L GK+IH V+R ++ AL
Sbjct: 480 CFEALIFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y +C + A F S DV N ++ G+ +G +E+F M K ++PD
Sbjct: 540 LDMYVRCGRMNIAWNQFN-SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDE 598
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
ITF +L C V+ L +F M +YG+ P L+HY C++ L R G ++E F+
Sbjct: 599 ITFISLLCGCGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+MP P + + + CR + LGE +A+R+ EL+
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELD 695
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 142/285 (49%), Gaps = 4/285 (1%)
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+EA+ + M++ +D+ ++ +C + G +V+ + S ++ + NA
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAF 135
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRP 475
L M+ + GNL A F +MS+ R+ SWN ++ GYA++G +EA+ + M W +P
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
+TF +L C I L +G+++H V+R YE+++ AL+ +Y KC ++ A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
D+I N+MI G+ N G E L++F M+ + PD +T ++ AC G+ +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
L + + G + + ++Y G +E E +RM
Sbjct: 315 LG-RDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM 358
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 158/370 (42%), Gaps = 26/370 (7%)
Query: 59 VEARKL--ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
VE KL ++ L+++ V + N I Y KC +D A +F +P ++ SW +++
Sbjct: 418 VELHKLAIKARLISY-----VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
N L F M + + N IT L + A L K++H +++ G
Sbjct: 473 GLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGL 531
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ L ++L+D Y +C M A F+ Q K+ SWN+++ Y G G V +F +M+
Sbjct: 532 DDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMV 590
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+ +RP TF + L C +G+ + + + + ++ + G L+
Sbjct: 591 KARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQ 650
Query: 297 DARGLLDQ-PDERNIISWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGY 351
+A + + P + W ++++ I I A+ +F E+ + +V + + Y
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIF-ELDKGSVGYYILLCNLY 709
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
W+E +M++ +D AG S +++ +VH F+ + Y
Sbjct: 710 ADCGKWREVAKVRRMMKENGLTVD-----------AGCSWVEVKGKVHAFLSDDKYHPQT 758
Query: 412 FVSNALLDMY 421
N +LD +
Sbjct: 759 KEINTVLDGF 768
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 280/550 (50%), Gaps = 11/550 (2%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY-GKCMVMTDARRMFDDIQ 205
A +L L LGV QLH L + G + IL L+ Y ++ A + D
Sbjct: 79 AALLHHHRSHLRLGV--QLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAAD-- 134
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+ + +NV++ L G +A+ + +M + + P FT+ + L AC+ G
Sbjct: 135 STLPLPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRA 194
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H +G+ +L MY KCG L AR + D +R+++SW S++S YA G+
Sbjct: 195 VHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQ 254
Query: 326 IREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
EA ELF M E N ++WN + GY + ++ A+ + M + ++D VTL +
Sbjct: 255 WAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVI 314
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
LN C+ + +++GKE+HG R VSNAL+ MY +C ++ AR+ F +M +
Sbjct: 315 GLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLF-RMLECP 373
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
V+WN +L+ +A +EEA + F EM +P+ T T LA CA +++L+ G+++H
Sbjct: 374 GVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELH 433
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
++++ ++ + +L+++Y+K L A VF D+I SMI G+ +G
Sbjct: 434 GHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGT 493
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL +F M GIKPDHI +L AC H G V + F+ M YGI PQ+EHY CM
Sbjct: 494 VALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCM 553
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
I LY R G +++ E+ ++ PF PT M + C G +GE AAR+L E+
Sbjct: 554 IDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENA 613
Query: 681 FQFKITTNRF 690
+ + N +
Sbjct: 614 GHYVLIANMY 623
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 221/483 (45%), Gaps = 69/483 (14%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+N ++ + ++G P + L + +M +GV + TY +VLR+ AE EL + + +H
Sbjct: 141 YNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAA 200
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
G GN+ +++L+ Y KC + AR++FD + ++ VSWN ++ Y G EA+
Sbjct: 201 GAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAME 260
Query: 231 MFFKM-------------------------------LREDIR---PLNF-TFANALFACS 255
+F +M +RE +R +++ T L ACS
Sbjct: 261 LFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACS 320
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G +IHG+ +++ + + V +L MY +C +E AR L + +++W +
Sbjct: 321 RVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNT 380
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S +A+S EA +F EM R V +
Sbjct: 381 MLSSFALSDCAEEASSIFREMICRGV-------------------------------KPN 409
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT+ L +CA ++ ++ G+E+HG I ++ + + N+L+DMY K G L A+ F
Sbjct: 410 YVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFD 469
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
M D +S+ +++ GY +G+ A+ F +M +P T+L+AC++ +
Sbjct: 470 TMDD-CDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVL 528
Query: 495 QGKQI-HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+G+++ + VI + + ++++Y + LE A + + + ++G
Sbjct: 529 EGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGA 588
Query: 554 CHN 556
CH+
Sbjct: 589 CHD 591
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 155/333 (46%), Gaps = 37/333 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + CA ++ +V R + + +F N + Y KCG+L AR +FD M
Sbjct: 176 YPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMV 235
Query: 105 ERDGGSWNAML-----------------------------------GAYTQNGFPGRTLE 129
+RD SWN+M+ G Y Q +
Sbjct: 236 QRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVG 295
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV-ILESSLVDAY 188
L +M G + +T L + + L + K++HGL V R C V + ++L+ Y
Sbjct: 296 LIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAV-RMCCDQVESVSNALITMY 354
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
+C M AR +F ++ V+WN ++ + ++ +EA +F +M+ ++P T
Sbjct: 355 ARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVV 414
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L C+ +++ G ++HG I+K F+G ++ SL +MY K GRL A+ + D D+
Sbjct: 415 TYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDC 474
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++IS+TS+++GY + G+ A LF +M + +
Sbjct: 475 DMISYTSMIAGYGMQGKGTVALRLFEQMIDSGI 507
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 7/294 (2%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y +C +++ AR LF + +WN ML ++ + +F +M GV
Sbjct: 348 NALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVK 407
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N +T L A L ++LHG IVK GF G +L +SL+D Y K ++ A+ +
Sbjct: 408 PNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNV 467
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + + + +S+ ++ Y + G G A+ +F +M+ I+P + L ACS
Sbjct: 468 FDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLV 527
Query: 261 YEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
EG ++ + ++I + + ++Y + G LE A +LD P W ++V
Sbjct: 528 LEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVG 587
Query: 319 GYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
G I R AR+L EM N + + Y + W E LMR
Sbjct: 588 ACHDRGNIEIGERAARKLL-EMRTENAGHYVLIANMYAAAGCWDELATVRKLMR 640
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
LCA + ++L ++V L N I+ Y K G L A+ +FD M + D
Sbjct: 417 LALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDM 476
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHG 167
S+ +M+ Y G L LF M SG+ + I VL + S L L + +
Sbjct: 477 ISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNK 536
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN-- 224
+++ G + S ++D Y + ++ A M D + W +V GN
Sbjct: 537 MVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIE 596
Query: 225 -GKEAVVMFFKMLRED 239
G+ A +M E+
Sbjct: 597 IGERAARKLLEMRTEN 612
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 291/557 (52%), Gaps = 12/557 (2%)
Query: 131 FLDMNHSGVSANQITYA---NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
F+ + H S+ I + ++L L KQ+H I+ G N IL S L++
Sbjct: 77 FIHIQHHHASSFDIIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINF 136
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y ++ DA+ + + + + + WN+++ Y+ ++A+ ++ +ML + + P ++T+
Sbjct: 137 YASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTY 196
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+ L AC L G+ +H I + + V +L MY + G+LE AR L D
Sbjct: 197 PSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPA 256
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPE----RNVISWNAMLAGYTRSLLWKEALDF 363
R+ +SW +++S YA G EA LF M E RN+I WN + G + +K AL
Sbjct: 257 RDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKL 316
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
MR + +D V + + LN C+ + +K+GKE+HG R + V N L+ MY +
Sbjct: 317 FSQMRAVIQ-LDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSR 375
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
C +L A + F ++ ++ ++WNA+L+G+A +SEE EM E P+ T +
Sbjct: 376 CRDLNHAYLLFRKIDEK-GLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIAS 434
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+L CA I++L+ GK+ HC++++ + ++ +LVE+Y++ + A +VF S
Sbjct: 435 ILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSR 494
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D + SMI+G+ + G AL++F M++ IKPDH+T +L+AC H G V
Sbjct: 495 KDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVL 554
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F M YGI P++EHY CM+ L+ R G + + ++ + M PT + + C+ +G
Sbjct: 555 FRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHG 614
Query: 661 YATLGEWAARRLNELNP 677
+GEWAA +L E+ P
Sbjct: 615 NTVIGEWAAGKLLEMKP 631
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 134/592 (22%), Positives = 254/592 (42%), Gaps = 73/592 (12%)
Query: 30 ISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
I H S + + HL C + K++ + +++ +++++ L+++ I Y
Sbjct: 80 IQHHHASSFDIIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYAS 139
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
L DA+ + + D WN ++ Y +N + ++ M GV + TY +V
Sbjct: 140 VDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSV 199
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L++ E L+ +H I + ++ + ++LV YG+ + AR +FD + ++
Sbjct: 200 LKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDD 259
Query: 210 VSWNVIVRRYLVAGNGKEAVVMF----------------------------------FKM 235
VSWN ++ Y G EA +F F
Sbjct: 260 VSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQ 319
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+R I+ + L ACS + + G +IHG ++ F+ D V +L MY +C L
Sbjct: 320 MRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDL 379
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
A L + DE+ +I+W +++SG+A R E L EM V
Sbjct: 380 NHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGV-------------- 425
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND--YSSNIFV 413
+ + VT+ IL +CA ++ ++ GKE H ++ + + + + +
Sbjct: 426 -----------------EPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLL 468
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWE 472
N+L++MY + G + AR F +S R+D+V++ +++ GY G E A+ F+EM +
Sbjct: 469 WNSLVEMYSRSGKVLEARKVFDSLS-RKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLN 527
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEY 530
+P T +L AC++ + QG+ + +I Y I+ V +V+++ + L+
Sbjct: 528 IKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIE-VYGIDPRVEHYSCMVDLFGRAGLLDK 586
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
A V S + ++G C G + + K +KPDH ++
Sbjct: 587 AKEVITGMSCKPTSAIWATLIGAC-KIHGNTVIGEWAAGKLLEMKPDHSGYY 637
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 305/643 (47%), Gaps = 73/643 (11%)
Query: 62 RKLESNLV-----TFYPTPP-----VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
R+L S++ T YP P +AI + + G+ D A +FD MP R+ S+
Sbjct: 8 RQLHSSIFHVQRPTNYPKPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSY 67
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAM+ Y +N +LF M H +
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDL-------------------------------- 95
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
F N++L Y + + DAR +FD + K+ VSWN ++ Y+ +G+ EA +
Sbjct: 96 --FSWNLMLT-----GYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDV 148
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M + N N L A S E + + + + + + L YVK
Sbjct: 149 FDRMPHK-----NSISWNGLLAAYVRSGRLEEAR---RLFESKSDWELISCNCLMGGYVK 200
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
L DAR L DQ R++ISW +++SGYA G + +AR LF E P R+V +W AM+ Y
Sbjct: 201 RNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAY 260
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQ---VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
+ + EA R+ ++ Q ++ +++ A + MG+E +
Sbjct: 261 VQDGMLDEA-------RRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRE----LFEEMPF 309
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
NI N ++ Y + G+L AR F M QR D VSW A++ GYA+ G EEAM E
Sbjct: 310 PNIGSWNIMISGYCQNGDLAQARNLFDMMPQR-DSVSWAAIIAGYAQNGLYEEAMNMLVE 368
Query: 469 MQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M+ + ++ TF L+ACA+I++LE GKQ+H V+R YE + ALV +Y KC C
Sbjct: 369 MKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGC 428
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ A VF+ D++ N+M+ G+ + GR+AL VF M G+KPD IT G+L A
Sbjct: 429 IDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSA 488
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C H G ++F SM YGI P +HY CMI L R G ++E ++ + MPF P
Sbjct: 489 CSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAA 548
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ R +G LGE AA + ++ P + + +N +
Sbjct: 549 TWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLY 591
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 5/302 (1%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P P + N I Y + G+L AR LFD MP+RD SW A++ Y QNG + + +
Sbjct: 308 PFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLV 367
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M G S N+ T+ L + A+ L + KQ+HG +V+ G+ ++ ++LV Y KC
Sbjct: 368 EMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCG 427
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ +A +F +Q+K+ VSWN ++ Y G G++A+ +F M+ ++P T L
Sbjct: 428 CIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLS 487
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNI 310
ACS G + H + + + ++ + G LE+A+ L+ + P E +
Sbjct: 488 ACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDA 547
Query: 311 ISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+W +++ I G + +A E+ +M N + + Y S W + M
Sbjct: 548 ATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKM 607
Query: 368 RK 369
R+
Sbjct: 608 RQ 609
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 285/597 (47%), Gaps = 67/597 (11%)
Query: 148 NVLRSSAEELELGVSKQL-HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
N+L+ S + + QL H ++K G +V L ++L++ Y K AR++FD++
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 207 KNAVSWNVIVRRYLVAGNG-------------------------------KEAVVMFFKM 235
+ A SWN ++ Y G+ +A+ + +M
Sbjct: 78 RTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEM 137
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+RE I P FT N L + + G ++H I+K+ G+ V SL MY KCG
Sbjct: 138 MREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
A+ + D+ ++I SW ++++ + G++ A F +M ER++++WN+M++GY +
Sbjct: 198 MMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRG 257
Query: 356 LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
ALD F ++R + D+ TL +L+ CA L ++ +G+++H I + + V
Sbjct: 258 YDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVL 317
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQR--------------------------------RD 442
NAL+ MY +CG + +AR Q + RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRD 377
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
V+W A++ GY + G EA+ F M E RP+ +T +L+ ++++SL GKQIH
Sbjct: 378 VVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHG 437
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGR 560
+++ +V AL+ +Y K + A R F D + SMI+ +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EALE+F M EG++PDHIT+ G+ AC H G V Q+FD M+ IIP L HY CM
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L+ R G ++E ++F+ +MP P V + CR LG+ AA RL L P
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEP 614
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 257/523 (49%), Gaps = 39/523 (7%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
N+L KS K T +KS S L +L + + + + ARKL +
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEM-- 75
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
P F N + Y K G++D + FD +P+RD SW M+ Y G + + +
Sbjct: 76 --PLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRI 133
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
+M G+ +Q T NVL S A L K++H IVK G GNV + +SL++ Y K
Sbjct: 134 MGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 191 C------------MVMTD-------------------ARRMFDDIQNKNAVSWNVIVRRY 219
C MV+ D A F+ + ++ V+WN ++ Y
Sbjct: 194 CGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGY 253
Query: 220 LVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G A+ MF KMLR+ + P FT A+ L AC+ L G QIH I+ F+
Sbjct: 254 NQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDIS 313
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERN--IISWTSIVSGYAISGRIREARELFNEM 336
+VL +L MY +CG +E AR L++Q ++ I +T+++ GY G + EA+ +F+ +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSL 373
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+R+V++W AM+ GY + L+ EA++ M + + TL +L+V + L+ + GK
Sbjct: 374 KDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGK 433
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++HG ++ ++ VSNAL+ MY K G++ SA F + RD VSW +++ A+
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
G +EEA+ F M E RP T+ + +AC + + QG+Q
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 190/635 (29%), Positives = 294/635 (46%), Gaps = 73/635 (11%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y KC AR L + E D SW+A++ Y QNG L + +M G N+
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 144 ITYANVLR--SSAEELELG--------------------------------------VSK 163
T+++VL+ S LELG
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++HG ++K G+ + ++L+D Y K A +F +I + VSWN ++ ++
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
A+ + KM + P FT ++AL AC+ + G Q+H ++K+D E D V
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L +MY KCG L+DA R +F+ MP ++VI
Sbjct: 329 GLIDMYSKCGLLQDA-------------------------------RMVFDLMPXKDVIV 357
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN++++GY+ EA+ M K + +Q TL IL AG ++VH
Sbjct: 358 WNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISI 417
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ Y + +V+N+LLD Y KC L A F ++ D V++ +++T Y++ G EEA+
Sbjct: 418 KSGYQYDGYVANSLLDSYGKCCLLEDAAKVF-EVCPAEDLVAYTSMITAYSQYGLGEEAL 476
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ MQ + +P F F +L ACAN+S+ EQGKQIH V++ +V +LV +Y
Sbjct: 477 KMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMY 536
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC ++ A +F E S ++ ++MI G + GR+AL++F M K GI P+HIT
Sbjct: 537 AKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLV 596
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V A +FF M +GI P EHY CM+ + R G + E V MPF
Sbjct: 597 SVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPF 656
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + + R + LG AA L L P
Sbjct: 657 QASAAVWGALLGAARIHKNIELGRHAAEMLLTLEP 691
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 219/451 (48%), Gaps = 40/451 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L + L + CA+ + R+L S L+ P F+ I+ Y KCG L DAR
Sbjct: 287 PSMFTLSSAL-KACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARM 345
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD MP +D WN+++ Y+ G+ + LF +M G+ NQ T + +L+S+A
Sbjct: 346 VFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQA 405
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
G +Q+H + +K G+ + + +SL+D+YGKC ++ DA ++F+ ++ V++ ++
Sbjct: 406 NGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITA 465
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G G+EA+ M+ +M DI+P F F++ AC+ LS+ +G QIH ++K D
Sbjct: 466 YSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSD 525
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
SL MY KCG ++DA + ++ R I+SW++++ G A G R+A +LF +M +
Sbjct: 526 VFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLK 585
Query: 339 R----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
N I+ ++L+ + L EA F LM K
Sbjct: 586 NGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK------------------------- 620
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+ G ++ + ++D+ + G L A + +M + W A+L G A
Sbjct: 621 ---LFGITPTQEHYA------CMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL-GAA 670
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
R ++ E +EM P K LLA
Sbjct: 671 RIHKNIELGRHAAEMLLTLEPEKSGTHILLA 701
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/622 (29%), Positives = 308/622 (49%), Gaps = 39/622 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-- 134
VF+ N + YG G++ DA +F MPER+ SWN+M+ ++ NG L M
Sbjct: 219 VFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMME 278
Query: 135 --NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ + + T A VL A + E+GV K +HGL +K V++ ++L+D Y KC
Sbjct: 279 KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCG 338
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE--DIRPLNFTFANA 250
+ DA+ +F NKN VSWN +V + AG+ + + +ML D+R T NA
Sbjct: 339 CINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNA 398
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
+ C FE + VL +L E++ L + N
Sbjct: 399 VPVC--------------------FE--ESVLPNLKELH--------CYSLKQEFVHNNE 428
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+ + V+ YA G + A +F + + V SWNA++ GY++S + +LD F M+ +
Sbjct: 429 LVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSS 488
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D T+ +L+ C+ + +K+GKEVHG I RN + FV +LL +Y CG L +A
Sbjct: 489 GLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTA 548
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN 489
+ F M + + VSWN ++ GY + G E A++ F +M + +P + + ++ AC+
Sbjct: 549 HVLFDAM-EDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSL 607
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ SL G++ H + ++ E N +++++Y K + + +VF V N+M
Sbjct: 608 LPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAM 667
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
++G+ + R +EA+++F M++ G PD +TF G+L AC H G V L + D M+ +G
Sbjct: 668 VMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFG 727
Query: 610 IIPQLEHYECMIKLYCRYGYMKE-LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
+ P L+HY C+I + R G + E L+ M P V + + CR + +GE
Sbjct: 728 MNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKI 787
Query: 669 ARRLNELNPWAPFQFKITTNRF 690
A +L P P + + +N +
Sbjct: 788 AAKLFVSEPEKPENYVLLSNLY 809
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 257/517 (49%), Gaps = 37/517 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHS 137
L R I Y CG+ DD+R +FD + +++ WNA++ +Y++N LE+F+ M S
Sbjct: 119 LCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITES 178
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ + T+ V+++ A E+ V +HGL+VK +V + ++LV YG ++DA
Sbjct: 179 GLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDA 238
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFA 253
R+F + +N VSWN ++R + G +E ++ +M+ +D P T A L
Sbjct: 239 LRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPV 298
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ G +HG+ +K+ + + VV +L +MY KCG + DA+ + + +N++SW
Sbjct: 299 CARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSW 358
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
++V G++ +G I + +L + MLAG
Sbjct: 359 NTMVGGFSAAGDIHKTFDLLRQ-----------MLAG------------------GGDLR 389
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMYRKCGNLRSARI 432
D+VT+ + VC S + KE+H + + ++ +N V+NA + Y KCG+L A
Sbjct: 390 ADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHR 449
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F + + SWNA++ GY++ ++ ++ +M+ P FT +LL+AC+ I
Sbjct: 450 VFCSIRSKTVN-SWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIK 508
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
SL+ GK++H +IRN E + +L+ +Y C L A +F ++ N+M+
Sbjct: 509 SLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVN 568
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
G+ N AL +F M G++P I+ + AC
Sbjct: 569 GYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGAC 605
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 230/471 (48%), Gaps = 40/471 (8%)
Query: 34 LKSDEPVSYS----LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
++ D+ ++++ A + +CA + I + + + V + N ++ Y K
Sbjct: 277 MEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSK 336
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYA 147
CG ++DA+ +F ++ SWN M+G ++ G +T +L M G + A+++T
Sbjct: 337 CGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTIL 396
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
N + EE L K+LH +K+ F N ++ ++ V +Y KC ++ A R+F I++
Sbjct: 397 NAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRS 456
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K SWN ++ Y + + + ++ +F+M + P FT + L ACS + S G ++
Sbjct: 457 KTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEV 516
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+II+ E D V SL +Y+ CG L A L D +++ ++SW ++V+GY +G
Sbjct: 517 HGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFP 576
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
A LF +M +L G ++++ + C
Sbjct: 577 ERALSLFRQM----------VLYGVQPC---------------------EISMMSVFGAC 605
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ L +++G+E HG+ + N F++ +++DMY K G++ + F + + R SW
Sbjct: 606 SLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKE-RSVASW 664
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQG 496
NA++ GY G+++EA+ F EMQ P + TF +L AC + + +G
Sbjct: 665 NAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEG 715
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 212/453 (46%), Gaps = 34/453 (7%)
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNV-ILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
++S ++ + +++H L+ + N +L + ++ Y C D+R +FD ++ KN
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHG 268
WN ++ Y + MF KM+ E + P NFTF + AC+ +S G+ +HG
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+++K D V +L Y G + DA + ERN++SW S++ ++ +G E
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
L +M E++ + + F T D+ TL +L VCA
Sbjct: 269 CFLLLGQMMEKD------------------DEIAF-------TPDV--ATLATVLPVCAR 301
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
EI +GK VHG + + V+NAL+DMY KCG + A++ F +++ ++ VSWN
Sbjct: 302 DREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIF-KLNNNKNVVSWNT 360
Query: 449 VLTGYARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
++ G++ G + +M + R + T + C S L K++HC+ ++
Sbjct: 361 MVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLK 420
Query: 506 NCY-EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ N + A V Y KC L YA RVF S V N++I G+ + R +L+
Sbjct: 421 QEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLD 480
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ MK G+ PD T +L AC ++KL
Sbjct: 481 AYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLG 513
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 168/365 (46%), Gaps = 25/365 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C+ K++ +++ ++ F+ + Y CG L A LFD M ++
Sbjct: 500 LLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT 559
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN M+ Y QNGFP R L LF M GV +I+ +V + + L + ++ HG
Sbjct: 560 LVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHG 619
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+K N + S++D Y K + ++ ++F+ ++ ++ SWN +V Y + G KE
Sbjct: 620 YALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKE 679
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSL 285
A+ +F +M R P TF L AC+ +EG+ +K F + + +
Sbjct: 680 AIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQ-MKTLFGMNPTLKHYACV 738
Query: 286 TEMYVKCGRLEDARGLL--DQPDERNIISWTSIVSGYAISGRI----REARELFNEMPER 339
+M V+ G+L++A + + +E + W ++S I + + A +LF PE+
Sbjct: 739 IDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEK 798
Query: 340 --NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
N + + + AG + W E +RK + + +++ L AG S I++ +
Sbjct: 799 PENYVLLSNLYAGSGK---WDE-------VRKVRQRMKEMS----LRKDAGCSWIELNGK 844
Query: 398 VHGFI 402
V F+
Sbjct: 845 VFSFV 849
>gi|125545042|gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group]
Length = 885
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 288/549 (52%), Gaps = 46/549 (8%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R++ + V + F+ N I Y + + DAR +FDEMPER SW AM+ AY +
Sbjct: 369 RRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDARKVFDEMPERSVVSWTAMMNAYLKL 428
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
G G + LF DM SGV N +T+ +L+S E + + +Q+H IVK G+ NVI++
Sbjct: 429 GHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW-SNVIVD 487
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S++ Y +C + A +FD + +++ +SW ++ Y+ G+G +A+ MF +M+ E R
Sbjct: 488 SAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAYVQHGHGGQALRMFSEMVSEGFR 547
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P FT + L AC+ + G Q+H ++K ++ D + +L MY +CG + D
Sbjct: 548 PNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFD---- 603
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
A+ +F+ MP RN I+W +M++GY +S ++A
Sbjct: 604 ---------------------------AQAVFDMMPRRNTITWTSMISGYAQSGHGEKA- 635
Query: 362 DFVFLMRKTTKD---IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
+FL RK ++ +T+ +L+ C L + +GKE+H I +N N+ + + L+
Sbjct: 636 --IFLFRKMKMRRVFVNNLTIVGLLSACGSLQSLYLGKELHAQIIKNSMEDNLQIGSTLV 693
Query: 419 DMYRKCGNLR-SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
Y KCG +ARI + RD +SW A+++GY G + EA+ S +M W+ +P+
Sbjct: 694 WFYCKCGEYTYAARI--LEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPN 751
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+T+ + L ACA + +L+ G++IH FV + NV +L+++Y +C ++ A RVF
Sbjct: 752 TYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARRVFD 811
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+++ +I GF N EAL+ LM++EG + D +L +C G+++
Sbjct: 812 AMPEHNLVTWKVIITGFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSC---GDLQW 868
Query: 597 -ALQFFDSM 604
++ F DS+
Sbjct: 869 KSISFSDSV 877
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 170/342 (49%), Gaps = 31/342 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA KA+ ++L ++ + + + + Y +CG + DA+ +FD MP R+
Sbjct: 556 VLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRN 615
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W +M+ Y Q+G + + LF M V N +T +L + L + K+LH
Sbjct: 616 TITWTSMISGYAQSGHGEKAIFLFRKMKMRRVFVNNLTIVGLLSACGSLQSLYLGKELHA 675
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K N+ + S+LV Y KC T A R+ + + +++A+SW ++ Y G+ E
Sbjct: 676 QIIKNSMEDNLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHNVE 735
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ ML + ++P +T+++AL AC+ L + G +IHG + K + V SL +
Sbjct: 736 ALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLID 795
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY++CG++++AR + D E N+++W I++G+A +G
Sbjct: 796 MYMRCGKVDEARRVFDAMPEHNLVTWKVIITGFAQNG----------------------- 832
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
L +EAL +++LM++ ++D L +L C L
Sbjct: 833 --------LCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDL 866
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 13/293 (4%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L L C G ++ VH R+ S FV+N L+ Y + + AR F
Sbjct: 351 DAEALASSLRDCGGADGVR---RVHAVAVRSLDSLGTFVANNLISAYARFDEVSDARKVF 407
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M +R VSW A++ Y + G E + F +M + + TF LL +C
Sbjct: 408 DEMPER-SVVSWTAMMNAYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDA 466
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ G+Q+HC +++ + NV+ A+ Y +C + A +F + +S DVI +MI +
Sbjct: 467 KLGQQVHCCIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAY 525
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G +AL +F M EG +P+ T +L AC E V+ Q ++ K
Sbjct: 526 VQHGHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAV-LKKMYKND 584
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+ ++ +Y R G + + + + MP T+ I +GYA G
Sbjct: 585 IHIGSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMI------SGYAQSGH 631
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 300/597 (50%), Gaps = 50/597 (8%)
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFDEMP+RD SWN M+ YT G + LF DM G + +++ +L+ A
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ +Q+HGL+VK G+ NV + SSLVD Y KC + DA F +I N+VSWN ++
Sbjct: 63 FDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAG 122
Query: 219 YLVAGNGKEAVVMFFKM-LREDIRPLNFTFANAL------FACSFLSSPYEGMQIHGVII 271
++ + K A + M ++ + + TFA L C+ L Q+H ++
Sbjct: 123 FVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLK------QVHAKVL 176
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K+ GL E I +++S YA G + +A+
Sbjct: 177 KL--------------------------GL-----EHEITICNAMISSYANCGLVSDAKR 205
Query: 332 LFNEMP-ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F+ + +++ISWN+M+AG ++ + A + M + + D T I++ C+G
Sbjct: 206 VFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEE 265
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK--CGNLRSARIWFYQMSQRRDKVSWNA 448
GK +HG + + VSNAL+ MY + G ++ A F + + +D VSWN+
Sbjct: 266 HQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESL-KPKDLVSWNS 324
Query: 449 VLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++TG+++ G SE+A+ F ++ + F +L +C+++++L+ G+Q H ++
Sbjct: 325 IMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSS 384
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVF 566
+E N +L+ +Y+KC +E A + F++ SS + I N+MILG+ + G+ +L++F
Sbjct: 385 FESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLF 444
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M + +K DH+TF IL AC H G ++ L+ +SM Y I P++EHY + L R
Sbjct: 445 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGR 504
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
G + ++++ + MP NP +L+ CR G + A L E+ P F +
Sbjct: 505 AGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFAY 561
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 217/428 (50%), Gaps = 36/428 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN- 135
V++ + ++ Y KC ++DA G F E+ E + SWNA++ + Q L M
Sbjct: 82 VYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAFWLLGLMEM 141
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+ V+ + T+A +L + + + KQ+H ++K G + + ++++ +Y C +++
Sbjct: 142 KAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLVS 201
Query: 196 DARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DA+R+FD + +K+ +SWN ++ + A +F +M R I +T+ + AC
Sbjct: 202 DAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSAC 261
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK--CGRLEDARGLLDQPDERNIIS 312
S G +HG++IK E V +L MY++ G ++DA L + ++++S
Sbjct: 262 SGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVS 321
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W SI++G++ +G L ++A+ F +R +
Sbjct: 322 WNSIMTGFSQNG-------------------------------LSEDAVKFFRYLRSSNI 350
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
++D +L C+ L+ +++G++ H ++ + SN FV+++L+ MY KCG + +AR
Sbjct: 351 EVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARK 410
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
F Q+S + + ++WNA++ GYA+ G + ++ FS+M + TF +L AC++
Sbjct: 411 CFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTG 470
Query: 492 SLEQGKQI 499
+++G ++
Sbjct: 471 LIQEGLEL 478
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 163/305 (53%), Gaps = 10/305 (3%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+ + N I Y CG + DA+ +FD + +D SWN+M+ +++ ELF +M+
Sbjct: 184 ITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMH 243
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK--CMV 193
+ + + TY ++ + + E K LHGL++K+G + ++L+ Y + V
Sbjct: 244 RNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGV 303
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALF 252
M DA +F+ ++ K+ VSWN I+ + G ++AV FF+ LR +I ++ F+ L
Sbjct: 304 MKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAV-KFFRYLRSSNIEVDDYAFSAVLR 362
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNII 311
+CS L++ G Q H + K FE ++ V SL MY KCG +E+AR +Q + N I
Sbjct: 363 SCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTI 422
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLM 367
+W +++ GYA G + + +LF++M +NV +++ A+L + + L +E L+ + M
Sbjct: 423 AWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSM 482
Query: 368 RKTTK 372
K
Sbjct: 483 EPVYK 487
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 184/405 (45%), Gaps = 35/405 (8%)
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+FD++ +++VSWN ++ Y G + + +F M R ++F+ L +
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G Q+HG+++K +E + V SL +MY KC R+EDA G + E N +SW ++++
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G+ ++R+ T++ W L + K +D T
Sbjct: 122 GFV---QVRD-----------------------TKTAFWLLGL----MEMKAAVTMDDGT 151
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L + + K+VH + + I + NA++ Y CG + A+ F +
Sbjct: 152 FAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLG 211
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQG 496
+D +SWN+++ G ++ Q E A F+EM W +T+ +++AC+ G
Sbjct: 212 GSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNW-IETDIYTYTGIVSACSGEEHQSFG 270
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTK--CCCLEYAIRVFKESSSLDVIICNSMILGFC 554
K +H VI+ E AL+ +Y + ++ A+ +F+ D++ NS++ GF
Sbjct: 271 KSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFS 330
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
N +A++ F ++ I+ D F +L +C ++L Q
Sbjct: 331 QNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQ 375
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 253/458 (55%), Gaps = 3/458 (0%)
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
++L + +P ++ + +C +G ++H I F +L L EMY KC
Sbjct: 59 LQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKC 118
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
L D++ L D+ ER++ SW ++SGYA G ++EA+ LF++MPER+ SW AM++GY
Sbjct: 119 DSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYV 178
Query: 353 RSLLWKEALDFVFLMRKT-TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
R EAL+ +M+++ ++ T+ L A + +++GKE+HG+I R S+
Sbjct: 179 RHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDE 238
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-Q 470
V +AL DMY KCG++ AR F +M R D V+W A++ Y + G+ +E F+++ +
Sbjct: 239 VVWSALSDMYGKCGSIEEARHIFDKMVDR-DIVTWTAMIDRYFQDGRRKEGFDLFADLLR 297
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
RP++FTF +L ACAN +S E GK++H ++ R ++ ALV +Y+KC +
Sbjct: 298 SGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVS 357
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A RVFKE+ D+ S+I G+ N + EA+ F L+ K G +PDHITF G+L AC H
Sbjct: 358 AERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAH 417
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G V L +F S++ +YG+ +HY C+I L R G E E+ +++M P +
Sbjct: 418 AGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWA 477
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ CR +G L + AA L E+ P P + N
Sbjct: 478 SLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLAN 515
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 227/494 (45%), Gaps = 80/494 (16%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+P S S+Y+ L Q C S+ + + +K+ ++ P +F+LNR +E Y KC +L D+
Sbjct: 66 DKP-SASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDS 124
Query: 97 RGLFDEMPERDGGSWN-------------------------------AMLGAYTQNGFPG 125
+ LFDEMPERD SWN AM+ Y ++ P
Sbjct: 125 QKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPN 184
Query: 126 RTLELFLDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
LELF M S S +N+ T ++ L ++A L + K++HG I++ G + ++ S+L
Sbjct: 185 EALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSAL 244
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
D YGKC + +AR +FD + +++ V+W ++ RY G KE +F +LR IRP
Sbjct: 245 SDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNE 304
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FTF+ L AC+ +S G ++HG + ++ F+ +L MY KCG + A + +
Sbjct: 305 FTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKE 364
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+ ++ SWTS+++GYA +G+ EA F
Sbjct: 365 TPQPDLFSWTSLIAGYAQNGQPDEAIRYFE------------------------------ 394
Query: 365 FLMRKTTKDIDQVTLGLILNVCA-------GLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
L+ K+ D +T +L+ CA GL KE +G H D+ + I
Sbjct: 395 -LLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACI------ 447
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETR 474
+D+ + G A +MS + DK W ++L G G ++ A + E++ E
Sbjct: 448 IDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENP 507
Query: 475 PSKFTFETLLAACA 488
+ T + A
Sbjct: 508 ATYVTLANIYATAG 521
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 216/489 (44%), Gaps = 106/489 (21%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
Y+ +++S + L K++H I GF + + + L++ Y KC + D++++FD++
Sbjct: 73 YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMP 132
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE--- 262
++ SWN+++ Y G +EA +F KM D NF++ + P E
Sbjct: 133 ERDLCSWNILISGYAKMGLLQEAKSLFDKMPERD----NFSWTAMISGYVRHDRPNEALE 188
Query: 263 ---------------------------------GMQIHGVIIKIDFEGDDVVLGSLTEMY 289
G +IHG I++ + D+VV +L++MY
Sbjct: 189 LFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMY 248
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG +E+AR + D+ +R+I++WT+++ Y GR +E +LF +
Sbjct: 249 GKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFAD-------------- 294
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
L+R + ++ T +LN CA + ++GK+VHG++ R +
Sbjct: 295 ----------------LLRSGIRP-NEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDP 337
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
F ++AL+ MY KCGN+ SA F + Q D SW +++ GYA+ GQ +EA+ F +
Sbjct: 338 FSFAASALVHMYSKCGNMVSAERVFKETPQ-PDLFSWTSLIAGYAQNGQPDEAIRYFELL 396
Query: 470 -QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ T+P TF +L+ACA+ +++G Y ++ + L C+
Sbjct: 397 VKSGTQPDHITFVGVLSACAHAGLVDKGLD---------YFHSIKEQYGLTHTADHYACI 447
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
I + S D E ++ K +KPD + +L C
Sbjct: 448 ---IDLLARSGQFD---------------------EAENIISKMSMKPDKFLWASLLGGC 483
Query: 589 IHEGNVKLA 597
GN+KLA
Sbjct: 484 RIHGNLKLA 492
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/633 (30%), Positives = 314/633 (49%), Gaps = 46/633 (7%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
L SS A+ L + LV +F+ R + Y G++ +R FD++P++D +
Sbjct: 125 LFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYT 184
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
WN+M+ AY NG + F + S + + T+ VL++ ++ +++H
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWA 241
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K GF NV + +SL+ Y + AR +FDD+ ++ SWN ++ + GN +A+
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301
Query: 230 VMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +M E I+ +NF T + L C L M IH +IK E D V +L M
Sbjct: 302 DVLDEMRLEGIK-MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINM 360
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y K G LEDAR Q +++SW SI++ Y + A F +M L
Sbjct: 361 YAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM----------QL 410
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY- 407
G+ LL TL + ++ A + K + VHGFI R +
Sbjct: 411 NGFQPDLL---------------------TLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++ + NA++DMY K G L SA F ++ +D +SWN ++TGYA+ G + EA+ +
Sbjct: 450 MEDVVIGNAVVDMYAKLGLLDSAHKVF-EIILVKDVISWNTLITGYAQNGLASEAIEVYK 508
Query: 468 EMQW--ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
M+ E P++ T+ ++L A A++ +L+QG +IH VI+ ++V L++VY KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC 568
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR--EALEVFGLMKKEGIKPDHITFHG 583
L A+ +F + + N++I CH G + L++FG M EG+KPDH+TF
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIIS--CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVS 626
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V+ F M+ +YGI P L+HY CM+ L R GY++ F+ MP
Sbjct: 627 LLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQ 685
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
P + + CR +G LG++A+ RL E++
Sbjct: 686 PDASIWGALLGACRIHGNIELGKFASDRLFEVD 718
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 284/529 (53%), Gaps = 6/529 (1%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+ LI+ + + L++A + AR++FD I + + + Y
Sbjct: 19 KQIQALIIIKYLSLTPLFIRRLLNAS----FIQYARQVFDQIPHPDQGVHCSFITAYSRL 74
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
EA+ F M + ++R + FT +C+ L + G Q+H ++I+ F
Sbjct: 75 SLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQ 134
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L Y K L A + D ++ I++ ++S Y+ SG + ARELF++M +R+++
Sbjct: 135 NALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIV 194
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWNAM++ Y ++ + + M+ + +++TL +L++CA L +++MG +
Sbjct: 195 SWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLN 254
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ SN+ VS A+L+MY KCG + R+ F M+ RRD V+W+A++ GYA+ G+S EA
Sbjct: 255 DNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMA-RRDVVTWSAMIAGYAQNGRSNEA 313
Query: 463 MTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F M+ + +P+ T ++L+ACA + S+E G++I +V NV AL+ +
Sbjct: 314 LELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGM 373
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y+KC + A ++F + D + NSMI+G N +A+ ++ MK+ +KP++ITF
Sbjct: 374 YSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITF 433
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G++ AC H G+V+L L+FF SMR + I P +EH+ C++ L+CR G + + +F+ RM
Sbjct: 434 VGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRME 493
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P V + + R + L E A ++L EL P + I +N +
Sbjct: 494 VEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIY 542
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 234/486 (48%), Gaps = 76/486 (15%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPT-PPVF---LLNRAIECYGKCGNLDDARGLFDE 102
+L L S I + +++++ ++ Y + P+F LLN + Y AR +FD+
Sbjct: 4 YLIDLLHCSLPINQLKQIQALIIIKYLSLTPLFIRRLLNASFIQY--------ARQVFDQ 55
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+P D G + + AY++ L F+ M+ + V T + +S A L + V
Sbjct: 56 IPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVG 115
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGK-----------------------CMV------ 193
KQ+H L+++ GF +V +++L++ Y K C++
Sbjct: 116 KQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRS 175
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ AR +FD +++++ VSWN ++ Y G+ + ++F +M E P T A L
Sbjct: 176 GEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVL 235
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
C+ L G++I + + + +V ++ EMYVKCG ++D R + D R+++
Sbjct: 236 SICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVV 295
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W+++++GYA +GR EA ELF M +
Sbjct: 296 TWSAMIAGYAQNGRSNEALELFENMKSAQI------------------------------ 325
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ VTL +L+ CA L ++ G+ + ++ SN++V++ALL MY KCGN+ AR
Sbjct: 326 -KPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKAR 384
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANI 490
F ++ Q RD V+WN+++ G A G +E+A+ ++ M + E +P+ TF L+ AC +
Sbjct: 385 QIFDKLPQ-RDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHA 443
Query: 491 SSLEQG 496
+E G
Sbjct: 444 GHVELG 449
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 179/387 (46%), Gaps = 4/387 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y + G + AR LFD+M +R SWNAM+ Y QNG + +F M
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+IT A VL A+ +L + ++ L + N+I+ +++++ Y KC + D R +
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 285
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V+W+ ++ Y G EA+ +F M I+P + T + L AC+ L S
Sbjct: 286 FDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSV 345
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +I + + V +L MY KCG + AR + D+ +R+ ++W S++ G
Sbjct: 346 ETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGL 405
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
AI+G +A L+N M E V N G + ++ ++ + ++
Sbjct: 406 AINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPN 465
Query: 381 LILNVCAGLSEIKMGK--EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ C + G+ + + FI R + N+ + LL R N+ A + ++
Sbjct: 466 IEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLL 525
Query: 439 QRRDKVSWNAVLTG--YARRGQSEEAM 463
+ S N V+ YA G+ +EA+
Sbjct: 526 ELEPDNSGNYVILSNIYASAGRWQEAL 552
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
VE+R L SN V++ + + Y KCGN+ AR +FD++P+RD +WN+M+
Sbjct: 355 VESRGLISN---------VYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGL 405
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGV 161
NGF + L+ M V N IT+ ++ + A +ELG+
Sbjct: 406 AINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGL 450
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/601 (30%), Positives = 283/601 (47%), Gaps = 94/601 (15%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y + G + AR LFDEMPERD SWN M+ Y +N G+ ELF M
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERM------ 147
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARR 199
+R C N IL Y + + DARR
Sbjct: 148 -----------------------------PERDVCSWNTIL-----SGYAQNGCVDDARR 173
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD + KN VSWN ++ Y+ +EA V+F + N + + +
Sbjct: 174 VFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEA 233
Query: 260 P--YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ M++ V+ + ++ G Y + G +++AR L D+ ++ +WT++V
Sbjct: 234 RQFFDSMKVRDVV-----SWNTIITG-----YAQNGEIDEARQLFDESPVHDVFTWTAMV 283
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGY + + EARELF+ MPERN +SWNAMLAGY +
Sbjct: 284 SGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQG----------------------- 320
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
++M KE+ + N+ N ++ Y +CG + A+ F +M
Sbjct: 321 ------------ERVEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKM 364
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
+RD VSW A++ GY++ G S EA+ F M+ E R ++ +F + L+ CA++ +LE G
Sbjct: 365 P-KRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELG 423
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
KQ+H +++ YE AL+ +Y KC +E A +FKE + D++ N+MI G+ +
Sbjct: 424 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 483
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G EAL F MK+EG+KPD T +L AC H G V Q+F +M YG+ P +H
Sbjct: 484 GFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQH 543
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ L R G ++E + + MPF P + + R +G L E AA ++ +
Sbjct: 544 YACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 603
Query: 677 P 677
P
Sbjct: 604 P 604
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 229/468 (48%), Gaps = 54/468 (11%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P V N + Y + G +DDAR +FD MPE++ SWNA+L AY QN
Sbjct: 148 PERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQN----------- 196
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+++ A VL S E L L G VK+
Sbjct: 197 ---------SKLEEACVLFGSRENWALVSWNCLLGGFVKK-------------------K 228
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ +AR+ FD ++ ++ VSWN I+ Y G EA +F D P++ F
Sbjct: 229 KIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLF------DESPVHDVFTWTAM 282
Query: 253 ACSFLSSPY--EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
++ + E ++ + E ++V ++ YV+ R+E A+ L D RN+
Sbjct: 283 VSGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV 338
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+W ++++GYA G+I EA+ LF++MP+R+ +SW AM+AGY++S EAL LM +
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMERE 398
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+++ + L+ CA + +++GK++HG + + Y + FV NALL MY KCG++ A
Sbjct: 399 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 458
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACAN 489
F +M+ +D VSWN ++ GY+R G EEA+ F M+ E +P T +L+AC++
Sbjct: 459 NDLFKEMAG-KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH 517
Query: 490 ISSLEQGKQ-IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+++G+Q H N +V++ + LE A + K
Sbjct: 518 TGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMK 565
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 140/285 (49%), Gaps = 6/285 (2%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
E ++ L P V N I Y +CG + +A+ LFD+MP+RD SW AM+ Y+
Sbjct: 321 ERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 380
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+G L LF+ M G N+ ++++ L + A+ + L + KQLHG +VK G+
Sbjct: 381 QSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 440
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ ++L+ Y KC + +A +F ++ K+ VSWN ++ Y G G+EA+ F M RE
Sbjct: 441 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG 500
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
++P + T L ACS +G Q H + + + ++ + G LE+A
Sbjct: 501 LKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEA 560
Query: 299 RGLL-DQPDERNIISWTSIVSGYAISGRIR----EARELFNEMPE 338
L+ + P E + W +++ + G A ++F PE
Sbjct: 561 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 605
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 79/416 (18%)
Query: 53 ASSKAIVEARKL--ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
A + I EAR+L ES P VF + Y + +++AR LFD MPER+ S
Sbjct: 256 AQNGEIDEARQLFDES------PVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVS 309
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WNAML Y Q E +E+ +K+L ++
Sbjct: 310 WNAMLAGYVQ---------------------------------GERVEM--AKELFDVMP 334
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
C NV ++++ Y +C +++A+ +FD + ++ VSW ++ Y +G+ EA+
Sbjct: 335 ----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALR 390
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F M RE R +F++AL C+ + + G Q+HG ++K +E V +L MY
Sbjct: 391 LFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 450
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG +E+A L + ++I+SW ++++GY+ G F E
Sbjct: 451 KCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG--------FGE--------------- 487
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE-VHGFIHRNDYSS 409
EAL F M++ D T+ +L+ C+ + G++ H
Sbjct: 488 --------EALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRP 539
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
N ++D+ + G L A M D W +L G +E A T+
Sbjct: 540 NSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETA 595
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 153/342 (44%), Gaps = 29/342 (8%)
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
L + + +I W +S Y +GR EA +F MP + +S+NAM++GY R+
Sbjct: 51 LPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRN----GEF 106
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ ++ + D V+ +++ + +E+ + D S N +L Y
Sbjct: 107 ELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCS----WNTILSGY 162
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTF 480
+ G + AR F +M ++ D VSWNA+L+ Y + + EEA F S W + ++
Sbjct: 163 AQNGCVDDARRVFDRMPEKND-VSWNALLSAYVQNSKLEEACVLFGSRENW----ALVSW 217
Query: 481 ETLLAACANISSLEQGKQ-IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
LL + + +Q +R+ N + G Y + ++ A ++F ES
Sbjct: 218 NCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITG-----YAQNGEIDEARQLFDESP 272
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
DV +M+ G+ N EA E+F M + + ++++ +L + V++A +
Sbjct: 273 VHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKE 328
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
FD M C+ + + MI Y + G + E ++ ++MP
Sbjct: 329 LFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMP 365
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/625 (29%), Positives = 308/625 (49%), Gaps = 46/625 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-- 134
VF+ N + YG G + DA LFD MPER+ SWN+M+ ++ NGF + L +M
Sbjct: 577 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 636
Query: 135 -NHSGVSANQI-TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
N G + T VL A E E+G+ K +HG VK ++L ++L+D Y KC
Sbjct: 637 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 696
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR--EDIRPLNFTFANA 250
+T+A+ +F NKN VSWN +V + G+ + +ML ED++ T NA
Sbjct: 697 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 756
Query: 251 LFAC---SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+ C SFL S E +H +K +F +++V + Y KCG L
Sbjct: 757 VPVCFHESFLPSLKE---LHCYSLKQEFVYNELVANAFVASYAKCGSLS----------- 802
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
A+ +F+ + + V SWNA++ G+ +S + +LD M
Sbjct: 803 --------------------YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 842
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ + D T+ +L+ C+ L +++GKEVHGFI RN ++FV ++L +Y CG L
Sbjct: 843 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 902
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAA 486
+ + F M + + VSWN V+TGY + G + A+ F +M + + + + A
Sbjct: 903 CTVQALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 961
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C+ + SL G++ H + +++ E + +L+++Y K + + +VF
Sbjct: 962 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 1021
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
N+MI+G+ + +EA+++F M++ G PD +TF G+L AC H G + L++ D M+
Sbjct: 1022 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 1081
Query: 607 KYGIIPQLEHYECMIKLYCRYGYM-KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+G+ P L+HY C+I + R G + K L M V + + + CR + +G
Sbjct: 1082 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG 1141
Query: 666 EWAARRLNELNPWAPFQFKITTNRF 690
E A +L EL P P + + +N +
Sbjct: 1142 EKVAAKLFELEPEKPENYVLLSNLY 1166
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 257/518 (49%), Gaps = 40/518 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHS 137
L R I Y CG+ DD+R +FD + ++ WNA++ +Y++N LE F++M + +
Sbjct: 477 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 536
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + TY V+++ A ++G+ +HGL+VK G +V + ++LV YG +TDA
Sbjct: 537 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 596
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFA 253
++FD + +N VSWN ++R + G +E+ ++ +M+ E+ P T L
Sbjct: 597 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 656
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ G +HG +K+ + + V+ +L +MY KCG + +A+ + + +N++SW
Sbjct: 657 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 716
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
++V G++ G ++ + MLAG +D
Sbjct: 717 NTMVGGFSAEGDTHGTFDVLRQ-----------MLAG--------------------GED 745
Query: 374 I--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D+VT+ + VC S + KE+H + + ++ N V+NA + Y KCG+L A+
Sbjct: 746 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 805
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F+ + + SWNA++ G+A+ ++ + +M+ P FT +LL+AC+ +
Sbjct: 806 RVFHGIRSKTVN-SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
SL GK++H F+IRN E ++ +++ +Y C L +F ++ N++I
Sbjct: 865 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 924
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
G+ N AL VF M GI+ I+ + AC
Sbjct: 925 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 962
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 221/458 (48%), Gaps = 41/458 (8%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNV-ILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L++S + ++ + +++H L+ N +L + ++ Y C D+R +FD +++K
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI 266
N WN ++ Y E + F +M+ D+ P +FT+ + AC+ +S G+ +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG++ VK G +ED + ++VS Y G +
Sbjct: 565 HGLV-------------------VKTGLVED------------VFVGNALVSFYGTHGFV 593
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD----IDQVTLGLI 382
+A +LF+ MPERN++SWN+M+ ++ + +E+ + M + D D TL +
Sbjct: 594 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 653
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L VCA EI +GK VHG+ + + ++NAL+DMY KCG + +A++ F +M+ ++
Sbjct: 654 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKN 712
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQI 499
VSWN ++ G++ G + +M + + + T + C + S L K++
Sbjct: 713 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 772
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
HC+ ++ + N + A V Y KC L YA RVF S V N++I G +
Sbjct: 773 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 832
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
R +L+ MK G+ PD T +L AC +++L
Sbjct: 833 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 870
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 244/510 (47%), Gaps = 40/510 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +CA + I + + V + L N ++ Y KCG + +A+ +F ++
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQL 165
SWN M+G ++ G T ++ M G V A+++T N + E L K+L
Sbjct: 713 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 772
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +K+ F N ++ ++ V +Y KC ++ A+R+F I++K SWN ++ + + +
Sbjct: 773 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 832
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ ++ +M + P +FT + L ACS L S G ++HG II+ E D V S+
Sbjct: 833 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 892
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+Y+ CG L + L D ++++++SW ++++GY +G A +F +M + +
Sbjct: 893 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-----VLYG 947
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
L G +++ + C+ L +++G+E H + ++
Sbjct: 948 IQLCG--------------------------ISMMPVFGACSLLPSLRLGREAHAYALKH 981
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ F++ +L+DMY K G++ + F + + + SWNA++ GY G ++EA+
Sbjct: 982 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKL 1040
Query: 466 FSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVY 522
F EMQ P TF +L AC + + +G + + +++ + + N+ ++++
Sbjct: 1041 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR-YLDQMKSSFGLKPNLKHYACVIDML 1099
Query: 523 TKCCCLEYAIRVFKE--SSSLDVIICNSMI 550
+ L+ A+RV E S DV I S++
Sbjct: 1100 GRAGQLDKALRVVAEEMSEEADVGIWKSLL 1129
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 209/468 (44%), Gaps = 56/468 (11%)
Query: 30 ISGHLKSDEPVSYSLYAHL-----------------FQLCASSKAIVEARKLESNLVTFY 72
I GH +S++P SL AHL C+ K++ +++ ++ +
Sbjct: 823 IGGHAQSNDP-RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 881
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
+F+ + Y CG L + LFD M ++ SWN ++ Y QNGFP R L +F
Sbjct: 882 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 941
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ I+ V + + L + ++ H +K + + SL+D Y K
Sbjct: 942 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 1001
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+T + ++F+ ++ K+ SWN ++ Y + G KEA+ +F +M R P + TF L
Sbjct: 1002 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 1061
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL--DQPDERN 309
AC+ +EG++ + + + + + +M + G+L+ A ++ + +E +
Sbjct: 1062 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 1121
Query: 310 IISWTSIVSGYAISGRI----REARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDF 363
+ W S++S I + + A +LF PE+ N + + + AG + W++
Sbjct: 1122 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK---WED---- 1174
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+RK + +++++ L AG S I++ ++V F+ V LD + +
Sbjct: 1175 ---VRKVRQRMNEMS----LRKDAGCSWIELNRKVFSFV----------VGERFLDGFEE 1217
Query: 424 CGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYAR----RGQSEEAMTSF 466
+L S + +M R D +S L+ + RG SE+ ++
Sbjct: 1218 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 1265
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 16/231 (6%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIH-----RNDYSSNIFVSNALLDMYRKCGNLRSARI 432
LGL+L +I+MG+++H + RND + ++ MY CG+ +R
Sbjct: 441 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD----VLCTRIITMYAMCGSPDDSRF 496
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANI 490
F + + ++ WNAV++ Y+R +E + +F EM T P FT+ ++ ACA +
Sbjct: 497 VFDAL-RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 555
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
S + G +H V++ +V ALV Y + A+++F +++ NSMI
Sbjct: 556 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 615
Query: 551 LGFCHNERGREALEVFGLMKKE----GIKPDHITFHGILLACIHEGNVKLA 597
F N E+ + G M +E PD T +L C E + L
Sbjct: 616 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 666
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 483 LLAACANISSLEQGKQIHCFV-----IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
LL A +E G++IH V +RN +V+C ++ +Y C + + VF
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRN---DDVLCT-RIITMYAMCGSPDDSRFVFDA 500
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S ++ N++I + NE E LE F ++ + PDH T+ ++ AC +V +
Sbjct: 501 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 560
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L + K G++ + ++ Y +G++ + + MP
Sbjct: 561 GLAVH-GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 604
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 278/535 (51%), Gaps = 39/535 (7%)
Query: 163 KQLHGLIVKRGFCGNVILE-SSLVDAYGKCMVMTDAR---RMFDDIQNKNAVSWNVIVRR 218
KQ+H I+K + L S+ + A + D R + ++ N +N I+R
Sbjct: 39 KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRG 98
Query: 219 YLVAGNGK-EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ N E +V++ +ML + I P N+T L AC+ + EG ++HG IK+
Sbjct: 99 LATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLAS 158
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V +L MY C IR AR++F+ P
Sbjct: 159 DVYVSNTLMRMYAVCDV-------------------------------IRSARKVFDTSP 187
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+R+++SW M+ GY + +E + F M D +TL ++L+ CA L ++++G++
Sbjct: 188 QRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRK 247
Query: 398 VHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H +I RN + + ++FV NAL+DMY KCG+ AR F +M + + VSWN++++G A++
Sbjct: 248 LHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK-NVVSWNSMISGLAQK 306
Query: 457 GQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
GQ +E++ F +MQ +P T +L +CAN+ LE GK +H ++ RN +
Sbjct: 307 GQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIG 366
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
ALV++Y KC ++ A VF+ + DV +MI+G + +G +AL++F M K GI+
Sbjct: 367 NALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIE 426
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF G+L AC H G V+ ++F+ M Y + PQLEHY CM+ L R G + E E+
Sbjct: 427 PDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEE 486
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F+ MP P +L + C+ +G LGE +++ ++ P + + +N +
Sbjct: 487 FIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIY 541
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 42/457 (9%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLL--NRAIECYGKCGNLDD--ARGLFDEMP 104
Q C S K + +++ ++++ P+P L R + +D A L ++
Sbjct: 29 LQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 85
Query: 105 ERDGGSWNAML-GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+ +NA++ G T N L ++ M G+ + T VL++ AE + +
Sbjct: 86 TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGE 145
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++HG +K G +V + ++L+ Y C V+ AR++FD ++ VSW +++ Y+ G
Sbjct: 146 EVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMG 205
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+E V +FF+M E+++ T L +C+ L G ++H II+ DV +G
Sbjct: 206 FAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVG 265
Query: 284 -SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY+KCG AR + + +N++SW S++SG A G+ +E+ +F +M V
Sbjct: 266 NALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV- 324
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
D VTL +LN CA L +++GK VH ++
Sbjct: 325 ------------------------------KPDDVTLVAVLNSCANLGVLELGKWVHAYL 354
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
RN ++ F+ NAL+DMY KCG++ A W +Q R+D S+ A++ G A GQ +A
Sbjct: 355 DRNQIRADGFIGNALVDMYAKCGSIDQA-CWVFQAMNRKDVYSYTAMIVGLAMHGQGGKA 413
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ FSEM + P + TF +L AC+++ +E+G++
Sbjct: 414 LDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 450
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y++ + + CA S+A+ E ++ + V++ N + Y C + AR
Sbjct: 123 PDNYTI-PFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARK 181
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD P+RD SW M+ Y + GF + LF +M + A+ +T VL S A +
Sbjct: 182 VFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGD 241
Query: 159 LGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + ++LH I++ +V + ++LVD Y KC AR++F ++ KN VSWN ++
Sbjct: 242 LRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMIS 301
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G KE++ MF KM R ++P + T L +C+ L G +H + +
Sbjct: 302 GLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRA 361
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D + +L +MY KCG ++ A + + +++ S+T+++ G A+ G+ +A +LF+EMP
Sbjct: 362 DGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMP 421
Query: 338 ERNV 341
+ +
Sbjct: 422 KMGI 425
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 16/330 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N ++ Y KCG+ + AR +F EMP ++ SWN+M+ Q G +L +F M
Sbjct: 262 VFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQR 321
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV + +T VL S A L + K +H + + + + ++LVD Y KC +
Sbjct: 322 LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQ 381
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + K+ S+ ++ + G G +A+ +F +M + I P TF L ACS
Sbjct: 382 ACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSH 441
Query: 257 LSSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWT 314
+ EG + + I + G + ++ + G + +A + + P E +
Sbjct: 442 VGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLG 501
Query: 315 SIVSGYAISGRIREARELFNEMPE---RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+++ I G++ + ++ + R ++ M Y+ + W++AL +RKT
Sbjct: 502 ALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALK----LRKTM 557
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
K+ + L G S I++ +H F
Sbjct: 558 KERN-------LEKTPGCSSIELDGVIHEF 580
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/633 (29%), Positives = 292/633 (46%), Gaps = 73/633 (11%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
EARKL + P + N I Y GNL +AR LF+E P ++ +W++++ Y
Sbjct: 55 EARKLFDQM----PYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYC 110
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+NG L F M G +Q T +VLR+ + L K +H +K N+
Sbjct: 111 KNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIF 170
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ + LVD Y KC + +A +F + + KN V W ++ Y G +A+ F +M +
Sbjct: 171 VATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQ 230
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ +FTF + L AC+ +S+ G Q+HG II F + V +L +MY KCG L A
Sbjct: 231 GMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASA 290
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R +LD + +++ W S++ G G + EA LF++M R++
Sbjct: 291 RMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDI----------------- 333
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
ID T +L A +K+G+ VH + + + VSNAL+
Sbjct: 334 --------------RIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALV 379
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
DMY K GNL A F ++ +D +SW +++TGY G E+A+ F +M+ +
Sbjct: 380 DMYAKQGNLSCALDVFNKILD-KDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQ 438
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
F + +ACA ++ +E G+Q+H I++ + +L+ +Y KC CLE AIRVF
Sbjct: 439 FVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDS 498
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ +VI ++I+G+ N G V+
Sbjct: 499 METRNVISWTAIIVGYAQN-----------------------------------GLVETG 523
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
+F+SM YGI P +HY CMI L R G + E E +NRM P + + + CR
Sbjct: 524 QSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACR 583
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+G LGE A + L +L P + + +N F
Sbjct: 584 VHGNLELGERAGKNLIKLEPSNSLPYVLLSNMF 616
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 212/434 (48%), Gaps = 34/434 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+L + + C++ + + + + +F+ ++ Y KC L +A
Sbjct: 131 KPSQYTL-GSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAE 189
Query: 98 GLFDEMPERDG-GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
LF +P+R W AML Y QNG + ++ F +M + G+ +N T+ ++L +
Sbjct: 190 YLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSI 249
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+Q+HG I+ GF NV ++S+LVD Y KC + AR + D ++ + V WN ++
Sbjct: 250 SAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMI 309
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ G +EA+V+F KM DIR +FT+ + L + + + G +H + IK F+
Sbjct: 310 VGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFD 369
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L +MY K G L A + ++ ++++ISWTS+V+GY +G +A +LF +
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCD- 428
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
MR D+DQ + + + CA L+ I+ G+
Sbjct: 429 ------------------------------MRTARVDLDQFVVACVFSACAELTVIEFGR 458
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+VH ++ S + N+L+ MY KCG L A I + + R+ +SW A++ GYA+
Sbjct: 459 QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDA-IRVFDSMETRNVISWTAIIVGYAQN 517
Query: 457 GQSEEAMTSFSEMQ 470
G E + F M+
Sbjct: 518 GLVETGQSYFESME 531
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 209/399 (52%), Gaps = 9/399 (2%)
Query: 245 FTFANALFACSF-LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
F +N C+F P IHG+ + +L L+ K GR+++AR L D
Sbjct: 6 FQTSNFFTKCNFHFKHPLFIRCIHGIAHYSSNLDSNQLLSELS----KNGRVDEARKLFD 61
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
Q R+ +W ++S YA G + EAR+LFNE P +N I+W+++++GY ++ E L
Sbjct: 62 QMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQ 121
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
M + Q TLG +L C+ LS + GK +H + + +NIFV+ L+DMY K
Sbjct: 122 FSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSK 181
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFET 482
C L A F+ + R++ V W A+LTGYA+ G+S +A+ F EM+ + S FTF +
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPS 241
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L AC +IS+ G+Q+H +I + + NV + ALV++Y KC L A R+ ++ +D
Sbjct: 242 ILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASA-RMILDTMEID 300
Query: 543 VIIC-NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
++C NSMI+G + EAL +F M I+ D T+ +L + N+K+ +
Sbjct: 301 DVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIG-ESV 359
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
S+ K G ++ +Y + G + D N++
Sbjct: 360 HSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 296/597 (49%), Gaps = 34/597 (5%)
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
+ I + K G+ +A +F+ + + ++ ML Y +N G L FL M V
Sbjct: 84 KVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRL 143
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
YA +L+ E L+L +++HGLI+ GF N+ + ++++ Y KC + +A +MF
Sbjct: 144 VVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMF 203
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ +Q+K+ VSW +V Y G+ K A+ + +M +P + T + L A + + +
Sbjct: 204 ERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALR 263
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G IHG + FE V +L +MY KCG
Sbjct: 264 IGRSIHGYAFRSGFESLVNVTNALLDMYFKCG---------------------------- 295
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
S RI AR +F M + V+SWN M+ G ++ +EA M + +VT+
Sbjct: 296 -SARI--ARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L CA L +++ G VH + + SN+ V N+L+ MY KC + A F + +
Sbjct: 353 VLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL--EK 410
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
V+WNA++ GYA+ G +EA+ F MQ + + FT ++ A A+ S Q K IH
Sbjct: 411 TNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIH 470
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+R C + NV ALV++Y KC ++ A ++F VI N+MI G+ + G+
Sbjct: 471 GLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGK 530
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
E L++F M+K +KP+ ITF ++ AC H G V+ L F SM+ Y + P ++HY M
Sbjct: 531 ETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAM 590
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G + + +F+ MP P + +L + C+ + LGE AA++L +L+P
Sbjct: 591 VDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDP 647
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 264/551 (47%), Gaps = 37/551 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA L QLC + + + R++ ++T +F++ + Y KC +D+A +F+ M
Sbjct: 148 YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ 207
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SW ++ Y QNG R L+L L M +G + +T ++L + A+ L + +
Sbjct: 208 HKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRS 267
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG + GF V + ++L+D Y KC AR +F +++K VSWN ++ G
Sbjct: 268 IHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGE 327
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA F KML E P T L AC+ L G +H ++ K+ + + V+ S
Sbjct: 328 SEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNS 387
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KC R++ A + + ++ N ++W +++ GYA +G ++EA LF M + +
Sbjct: 388 LISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGI--- 443
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+D TL ++ A S + K +HG R
Sbjct: 444 ----------------------------KLDCFTLVGVITALADFSVNRQAKWIHGLAVR 475
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+N+FVS AL+DMY KCG +++AR F M Q R ++WNA++ GY G +E +
Sbjct: 476 ACMDNNVFVSTALVDMYAKCGAIKTARKLF-DMMQERHVITWNAMIDGYGTHGVGKETLD 534
Query: 465 SFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY-EINVVCRGALVEVY 522
F+EMQ +P+ TF ++++AC++ +E+G + + + Y E + A+V++
Sbjct: 535 LFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLL 594
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+ L+ A +E I +LG C + E E K + PD +H
Sbjct: 595 GRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEK-AAQKLFKLDPDEGGYH 653
Query: 583 GILLACIHEGN 593
+LLA I+ N
Sbjct: 654 -VLLANIYASN 663
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 263/550 (47%), Gaps = 77/550 (14%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+ I+K GF + ++ ++ + K ++A R+F+ ++ K V ++++++ Y
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ +A+ F +M+ +++R + +A L C +G +IHG+II FE + V+
Sbjct: 125 SLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMT 184
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
++ +Y KC ++++A + ++ ++++SWT++V+GYA +G
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHA----------------- 227
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
K AL V M++ + D VTL IL A + +++G+ +HG+
Sbjct: 228 --------------KRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAF 273
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R+ + S + V+NALLDMY KCG+ R AR+ F M + + VSWN ++ G A+ G+SEEA
Sbjct: 274 RSGFESLVNVTNALLDMYFKCGSARIARLVFKGM-RSKTVVSWNTMIDGCAQNGESEEAF 332
Query: 464 TSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+F +M E P++ T +L ACAN+ LE+G +H + + + NV +L+ +Y
Sbjct: 333 ATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMY 392
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC ++ A +F +V N+MILG+ N +EAL +F +M+ +GIK D T
Sbjct: 393 SKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLV 451
Query: 583 GILLAC-----------IHE------------------------GNVKLALQFFDSMRCK 607
G++ A IH G +K A + FD M+ +
Sbjct: 452 GVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQER 511
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM---PFNPTVPMLRKIFDKCRKNGYATL 664
+ I + MI Y +G KE D N M P + C +G+
Sbjct: 512 HVIT-----WNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEE 566
Query: 665 GEWAARRLNE 674
G + + E
Sbjct: 567 GLLLFKSMQE 576
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 284/540 (52%), Gaps = 18/540 (3%)
Query: 19 KPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAI--VEARKLESNLVTFYPTPP 76
KP T+ T S LKS P ++ L + L + C S + V + ++ L P
Sbjct: 18 KPKQMTTIAAT-SSALKSFSPPTHPLIS-LLETCESMDQLQQVHCQAIKKGL----NANP 71
Query: 77 VFLLNRAIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
V L NR + C + G+ AR LFDE+PE + WN M+ Y++ FP + L+L+M
Sbjct: 72 V-LQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM 130
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
GV ++ T+ + + ++ L +QLHG ++K G NV + ++LV Y C +
Sbjct: 131 LRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQL 190
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
AR +FD + ++WN+I+ Y G +E+ +F M + + P T L AC
Sbjct: 191 DTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 250
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S L G ++H + E + V+ ++ +MY CG ++ A G+ + R+IISWT
Sbjct: 251 SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWT 310
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+IVSG+ G I AR F++MPE++ +SW AM+ GY RS +KEAL+ M+ T
Sbjct: 311 TIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKP 370
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D+ T+ +L CA L +++G+ + +I RN +++FV NAL+DMY KCG++ A F
Sbjct: 371 DEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIF 430
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+MSQ RDK +W A++ G A G E+A+ FS M + P + T+ +L+AC + +
Sbjct: 431 REMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 489
Query: 494 EQGKQIHC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++G++ ++ E N+ G LV++ + L+ A V + I NS++ G
Sbjct: 490 DKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP----IKANSIVWG 545
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 264/551 (47%), Gaps = 70/551 (12%)
Query: 163 KQLHGLIVKRGFCGNVILESSLV-----DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+Q+H +K+G N +L++ ++ YG ARR+FD+I N WN ++R
Sbjct: 56 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD---FQYARRLFDEIPEPNLFIWNTMIR 112
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y + V ++ +MLR ++P +TF + + G Q+HG ++K
Sbjct: 113 GYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLK----- 167
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
GL + N+ T++V Y + G++ AR +F+ P
Sbjct: 168 ---------------------HGL-----QYNVFVHTALVQMYLLCGQLDTARGVFDVCP 201
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ +VI+WN +++ Y + ++E+ +M VTL L+L+ C+ L +++ GK+
Sbjct: 202 KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK 261
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------- 440
VH ++ SN+ + NA++DMY CG + SA F M+ R
Sbjct: 262 VHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE 321
Query: 441 -------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAA 486
+D VSW A++ GY R + +EA+ F MQ +P +FT ++L A
Sbjct: 322 IDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 381
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA++ +LE G+ I ++ RN + ++ R AL+++Y KC ++ A +F+E S D
Sbjct: 382 CAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTW 441
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
+MI+G N G +AL++F M K I PD IT+ G+L AC H G V ++F M
Sbjct: 442 TAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTS 501
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
++GI P + HY C++ L R G +KE + + MP + + CR + + E
Sbjct: 502 QHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 561
Query: 667 WAARRLNELNP 677
+++ EL P
Sbjct: 562 MVVKQILELEP 572
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM--YRKCGNLRSARIWFYQMSQ 439
+L C + +++ +VH + ++N + N ++ + G+ + AR F ++ +
Sbjct: 45 LLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ WN ++ GY+R + ++ + EM + +P ++TF L +LE G+Q
Sbjct: 102 P-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 160
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H V+++ + NV ALV++Y C L+ A VF DVI N +I + +
Sbjct: 161 LHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK 220
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLAC 588
E+ +F +M+ + + P +T +L AC
Sbjct: 221 FEESRRLFLVMEDKQVLPTTVTLVLVLSAC 250
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 294/616 (47%), Gaps = 34/616 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
LLN +E YGKCG + DAR +F + + SW +L AY QNG LEL M+
Sbjct: 117 LLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLL 176
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTD 196
GV N +T A V+ + +E + ++++H +V+L ++L+D Y KC +
Sbjct: 177 GVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFH 236
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD +NK+ N ++ Y+ G +AV F ++ ++P T+A AC+
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ H I D VV +L MY +C
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRC------------------------ 332
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
G + +AR +F+ MP +NV++WN M+AGY + EAL M + D+
Sbjct: 333 -------GSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDE 385
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T +L C+ + G+++H + Y S++ V +AL+ MY CG+L A F++
Sbjct: 386 ITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHK 445
Query: 437 -MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
++ +SW A+LT R G+ A+ F +M E + + TF + + AC++I +L
Sbjct: 446 GVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALV 505
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G I VI Y I+VV +L+ +Y KC L+YA+ VF S +++ N+++
Sbjct: 506 EGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASS 565
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N + E+ M +G +P+ +T +L C H G V A+ +F SM + ++P
Sbjct: 566 QNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTS 625
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY C++ L R G ++E+E F++ PF+ + + C + G AARR+
Sbjct: 626 EHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLG 685
Query: 675 LNPWAPFQFKITTNRF 690
L+P + + +N F
Sbjct: 686 LDPKNASPYVLLSNMF 701
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 235/524 (44%), Gaps = 46/524 (8%)
Query: 60 EARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
EARK+ + T T V L+ I+ Y KCG++ A +FD+ +D NAM+ AY
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
Q G+ + F + SG+ NQ+TYA + R+ A ++ H + +V
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDV 319
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
++ ++LV Y +C + DARR+FD + KN V+WNV++ Y G EA+ ++ M
Sbjct: 320 VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ P TF N L +CS G IH ++ ++ VL +L MY CG L DA
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439
Query: 299 RGLLDQ--PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + ++ISWT++++ +G R A LF +M V +
Sbjct: 440 VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKA------------- 486
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+ VT ++ C+ + + G + + Y ++ + +
Sbjct: 487 ------------------NVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTS 528
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRP 475
L+++Y KCG L A F+ +S ++ V+WN +L ++ G+ + EM + +P
Sbjct: 529 LINLYGKCGRLDYALEVFHHLS-FKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQP 587
Query: 476 SKFTFETLLAACANISSLEQG-KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
++ T +L C++ + + V +C G LV++ + LE +
Sbjct: 588 NEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLE-EVEA 646
Query: 535 FKESS--SLDVIICNSMILGFC--HN--ERG-REALEVFGLMKK 571
F S SLD ++ S+ LG C H+ ERG R A V GL K
Sbjct: 647 FISSKPFSLDSVLWMSL-LGSCVIHSDVERGLRAARRVLGLDPK 689
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 237/536 (44%), Gaps = 43/536 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
Y ++L+ + + L + Q H KR F G+ +L + +V+AYGKC + DAR +F I
Sbjct: 85 AYVSLLKQAGDVTALK-TIQAHISHSKR-FSGDRLLLNCVVEAYGKCGCVKDARLVFSSI 142
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
++ N SW +++ Y G+ K + + +M + P T A + A S L E
Sbjct: 143 RHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEAR 202
Query: 265 QIHG-VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+IH D V++ +L +MY KCG + A + DQ +++ +++S Y
Sbjct: 203 KIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQL 262
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G +A FN ++ + +QVT L+
Sbjct: 263 GYTVDAVSTFNR-------------------------------IQPSGLQPNQVTYALLF 291
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA + H + ++ V+ AL+ MY +CG+L AR F +M ++
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPG-KNV 350
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
V+WN ++ GYA+ G ++EA+ + M+ P + TF +L +C+ L G+ IH
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKH 410
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGR 560
V+ Y+ ++ AL+ +Y+ C L A+ VF + ++ VI +M+ N GR
Sbjct: 411 VVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGR 470
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL +F M EG+K + +TF + AC G + F+ + G + + +
Sbjct: 471 SALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVT-GYLIDVVLGTSL 529
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
I LY + G + + + + F V I +NG TL +A L E++
Sbjct: 530 INLYGKCGRLDYALEVFHHLSFKNIVTW-NTILAASSQNGEETL---SAELLQEMD 581
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 165/325 (50%), Gaps = 6/325 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA LF+ CA++ +AR + P V + + Y +CG+L+DAR +FD MP
Sbjct: 287 YALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMP 346
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ +WN M+ Y Q G+ L+L++ M +GV ++IT+ NVL S + L +
Sbjct: 347 GKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRD 406
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLVA 222
+H +V G+ ++ + S+L+ Y C + DA +F + + +SW ++
Sbjct: 407 IHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRN 466
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G G+ A+ +F KM E ++ TF + + ACS + + EG I +I + D V+
Sbjct: 467 GEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLG 526
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM----PE 338
SL +Y KCGRL+ A + +NI++W +I++ + +G + EL EM +
Sbjct: 527 TSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQ 586
Query: 339 RNVISWNAMLAGYTRSLLWKEALDF 363
N ++ ML G + + L +A+ +
Sbjct: 587 PNEMTLLNMLFGCSHNGLVAKAVSY 611
>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/682 (26%), Positives = 323/682 (47%), Gaps = 44/682 (6%)
Query: 4 NAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARK 63
N ++ N + ++ SK+ + S ++D + H A+SK I+ +
Sbjct: 42 NHLSLFTNKMLRNQHHVYTSKSCNCSSSLSFRNDPTALSTALTH----SANSKCILLGSQ 97
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ + ++ +F N I Y KCG L +F EMP ++ SW ++ QNG
Sbjct: 98 IHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGE 157
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAE------ELELGVSKQLHGLIVKRGFCGN 177
L ++L+M +G+ N+ V ++ A L +Q+HGLI++ +
Sbjct: 158 FEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFS 217
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ +SL+D Y K A ++FD +Q+K+ +SWN + + +E F K++
Sbjct: 218 TAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLML 277
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
++P TF+ C G+Q H + + + V SL M+ +CG +
Sbjct: 278 TGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAM-- 335
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
R A +F+ P +++ + N M++GY +
Sbjct: 336 -----------------------------RMACLVFDSAPFKSIHTCNEMISGYNLNCHN 366
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
EAL+ + + D+ T L C K+G+++HG I ++ ++S +V ++L
Sbjct: 367 AEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSL 426
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
L Y G L + F+ +R D VSW A+++ +G S EA+ + + + +P
Sbjct: 427 LKCYVGFGLLDDS-FEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPD 485
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+F F ++ CA I++ Q K +H V++ YE +V A+++ Y KC +E A RVF
Sbjct: 486 EFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFD 545
Query: 537 ESSSL-DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
++S DVI+ N+M++ + H+ REA+E F MK ++P TF ++ AC H G V+
Sbjct: 546 QTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVE 605
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
FF SM YG+ P ++Y C++ L+ R G++++ + + MPF P + R + +
Sbjct: 606 QGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNG 665
Query: 656 CRKNGYATLGEWAARRLNELNP 677
CR +G LGEWAA++L +L P
Sbjct: 666 CRIHGNKELGEWAAKKLLQLVP 687
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/616 (28%), Positives = 292/616 (47%), Gaps = 107/616 (17%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++LRS+ L ++ H I+K G L ++LV Y + + DARR+FD+I
Sbjct: 24 ADLLRSAPN---LSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPL 80
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMF--------------------------------FK 234
+N S+N ++ Y G EA +F
Sbjct: 81 RNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLA 140
Query: 235 MLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+ D LN ++FA+AL AC+ G Q+HG++ + D + +L +MY KC
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCE 200
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
R EDA R +F+ MPERNV+SWN+++ Y +
Sbjct: 201 RPEDA-------------------------------RRVFDAMPERNVVSWNSLITCYEQ 229
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIF 412
+ EAL M D+VTL +++ CAGL+ + G++VH + + D ++
Sbjct: 230 NGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMV 289
Query: 413 VSNALLDMYRKCG-------------------------------NLRSARIWFYQMSQRR 441
++NAL+DMY KCG N+ A++ F QM ++
Sbjct: 290 LNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEK- 348
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIH 500
+ ++WN ++ YA+ G+ EEA+ F +++ ++ P+ +T+ +L AC NI+ L+ G+Q H
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAH 408
Query: 501 CFVIRNCY------EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
V++ + E +V +LV++Y K ++ +VF+ ++ D + N+MI+G+
Sbjct: 409 VHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYA 468
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N R ++AL +F M PD +T G+L AC H G V ++F SM +GI P
Sbjct: 469 QNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSR 528
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
+HY CM+ L R G++KE E+ +N MP P + + CR + LGEW A RL E
Sbjct: 529 DHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFE 588
Query: 675 LNPWAPFQFKITTNRF 690
L+P + + +N +
Sbjct: 589 LDPQNSGPYVLLSNMY 604
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 270/512 (52%), Gaps = 50/512 (9%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
+ + HL++ P L L S+ + AR + ++ FLLN + Y
Sbjct: 11 QELVAHLRASSP--------LADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTY 62
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF---------------- 131
+ G L DAR +FDE+P R+ S+NA+L AY + G P LF
Sbjct: 63 ARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVA 122
Query: 132 -LDMNHSGVSA----------------NQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
L + G +A N ++A+ L + A E + +Q+HGL+ +
Sbjct: 123 ALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPH 182
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
+V + S+LVD Y KC DARR+FD + +N VSWN ++ Y G EA+++F +
Sbjct: 183 ADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVE 242
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL-GSLTEMYVKCG 293
M+ P T ++ + AC+ L++ EG Q+H ++K D DD+VL +L +MY KCG
Sbjct: 243 MMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCG 302
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
R +AR + D R+I+S TSI++GYA S + +A+ +F++M E+NVI+WN ++A Y +
Sbjct: 303 RTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 362
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY------ 407
+ +EA+ +++ + T G +LN C ++++++G++ H + + +
Sbjct: 363 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGP 422
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S++FV N+L+DMY K G++ F +M+ RD VSWNA++ GYA+ G++++A+ F
Sbjct: 423 ESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA-RDNVSWNAMIVGYAQNGRAKDALHLFE 481
Query: 468 EMQWETR-PSKFTFETLLAACANISSLEQGKQ 498
M P T +L+AC + +++G++
Sbjct: 482 RMLCSNENPDSVTMIGVLSACGHSGLVDEGRR 513
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 176/420 (41%), Gaps = 111/420 (26%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+YS +A CA+ K ++ + V + + ++ Y KC +DAR +F
Sbjct: 151 AYS-FASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVF 209
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D MPER+ SWN+++ Y QNG G L LF++M +G S +++T ++V+ + A
Sbjct: 210 DAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADR 269
Query: 161 VSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN------------- 206
+Q+H +VK +++L ++LVD Y KC +AR +FD + +
Sbjct: 270 EGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGY 329
Query: 207 ------------------KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
KN ++WNV++ Y G +EA+ +F ++ R+ I P ++T+
Sbjct: 330 AKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYG 389
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGD-----DVVLG-SLTEMYVKC---------- 292
N L AC ++ G Q H ++K F D DV +G SL +MY+K
Sbjct: 390 NVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVF 449
Query: 293 ---------------------GRLEDARGLLDQ-------PDERNIIS------------ 312
GR +DA L ++ PD +I
Sbjct: 450 ERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVD 509
Query: 313 ---------------------WTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLAG 350
+T +V +G ++EA EL N+MP E + + W ++L
Sbjct: 510 EGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGA 569
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/644 (27%), Positives = 316/644 (49%), Gaps = 38/644 (5%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF--DEMPERDGG 109
C SSK + + + + + + + L I Y C + A +F ++ P D
Sbjct: 13 CTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCP-LDVS 71
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
WNA+L AYT N L+LF +N +S V + TY VL++ + +++H
Sbjct: 72 LWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNH 131
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++K G +V + SSL++ Y KC DA ++FD+ ++ WN ++ Y G + A
Sbjct: 132 LLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMA 191
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ F KM P + TF + +C+ L + G ++H +I+ D VL +L +M
Sbjct: 192 LKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDM 251
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KCG LE A+E+F ++P +N I+WNAM+
Sbjct: 252 YGKCGCLE-------------------------------MAKEVFEKIPRKNAITWNAMI 280
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY+ + ++ + M +TL I+ + +++ GK +HG+I RN
Sbjct: 281 TGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRID 340
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+IF+ +L+D Y KCG + SA F +S + + VSWN +++G+ G +A+ +
Sbjct: 341 VDIFIDVSLIDFYFKCGYVSSAETIFRTIS-KNEVVSWNVMISGHVMVGNHIQALHIYDN 399
Query: 469 M-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M + +P TF + L+AC+ +++L++G+++H +I + E N + GAL+++Y KC
Sbjct: 400 MKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGD 459
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
++ A ++F + D++ SMI + + + EAL +F M+K ++ D +TF +L A
Sbjct: 460 VDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSA 519
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT-V 646
C H G V +F+ M +Y I P +EHY C+I L R G + E + + R + +
Sbjct: 520 CSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDI 579
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+L +F C + LG + L E++P P + + +N +
Sbjct: 580 GLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMY 623
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 220/453 (48%), Gaps = 33/453 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C ++ R++ ++L+ VF+ + + Y KC DA LFDE P
Sbjct: 109 YPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFP 168
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD G WNA++ Y ++G L+ F M G N +T+ V+ S L L K+
Sbjct: 169 QRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKE 228
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++R + + S+LVD YGKC + A+ +F+ I KNA++WN ++ Y + G+
Sbjct: 229 VHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGD 288
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ + + +M E +P T + ++A S G IHG I++ + D + S
Sbjct: 289 SRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVS 348
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L + Y KCG + A + + ++SW ++SG+ + G +A +++ M E +V
Sbjct: 349 LIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHV--- 405
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
D +T L+ C+ L+ + G+E+H I
Sbjct: 406 ----------------------------KPDALTFSSTLSACSQLAALDKGRELHYCIIN 437
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +N V ALLDMY KCG++ AR F+Q+ +RD VSW +++ Y GQ+ EA+
Sbjct: 438 HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSMIFAYGSHGQASEALR 496
Query: 465 SFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
F EMQ R TF +L+AC++ +++G
Sbjct: 497 LFDEMQKLNVRADSVTFLAVLSACSHAGLVDEG 529
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 236/521 (45%), Gaps = 48/521 (9%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +T + LR+ L K +H I GF N++L SL+ Y C A +F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 202 DDIQNKNAVS-WNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLSS 259
VS WN ++ Y EA+ +F ++ +RP +T+ L AC L
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G +IH ++K D V SL MY KC + DA L D+ +R++ W +++S
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y G+ A + F++M E L F + + VT
Sbjct: 182 YFKDGKAEMALKTFDKMKE----------------------LGF---------EPNSVTF 210
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++++ C L ++ GKEVH + + FV +AL+DMY KCG L A+ F ++
Sbjct: 211 TVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIP- 269
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R++ ++WNA++TGY+ +G S + M E T+P+ T +++ A + L GK
Sbjct: 270 RKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKF 329
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH +++RN ++++ +L++ Y KC + A +F+ S +V+ N MI G
Sbjct: 330 IHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGN 389
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR-CKYGII-PQLEH 616
+AL ++ MK+ +KPD +TF L AC L D R Y II +LE
Sbjct: 390 HIQALHIYDNMKEHHVKPDALTFSSTLSACSQ-------LAALDKGRELHYCIINHKLEA 442
Query: 617 YE----CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
E ++ +Y + G + E +++P V IF
Sbjct: 443 NEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIF 483
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D VTL L C +K GK +H I + SNI +S +L+ Y C + SA +
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANIS 491
F D WNA+L+ Y + EA+ F ++ + RP +T+ +L AC +
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ G++IH +++ +V +L+ +Y KC AI++F E DV N++I
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ + + AL+ F MK+ G +P+ +TF ++ +C
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSC 217
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/647 (27%), Positives = 324/647 (50%), Gaps = 36/647 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER- 106
L + C ++K++ +A+ + ++T V L I Y C + AR +F+ + R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRS 68
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQL 165
D WN+++ Y++N TL++F + + + + TY NV+++ + + +
Sbjct: 69 DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H ++VK G +V++ SSLV Y K + D+ ++FD++ ++ SWN ++ + G+
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDA 188
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A+ +F +M R D P + + A+ ACS L G +IH +K +FE D+ V +L
Sbjct: 189 EKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSAL 248
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY +C LE ARE+F +M +++++WN
Sbjct: 249 VDMYGRCDFLE-------------------------------MAREVFQQMRRKSLVAWN 277
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+M+ GY K ++ + M Q TL IL C+ + GK VHG++ R+
Sbjct: 278 SMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRS 337
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++I+++ +L+D+Y KCG ++ A F + +Q+ SWN +++GY G +A+
Sbjct: 338 VVDADIYINCSLIDLYFKCGEVKLAETVFLK-TQKDVVESWNVMISGYVSVGNWFKAVDV 396
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ +M +P TF ++L+ C+ +++LE+GKQIH + + E + + AL+++Y+K
Sbjct: 397 YDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 456
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C ++ A R+F DV+ MI + + + REAL F M+K G+KPD +TF +
Sbjct: 457 CGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAV 516
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP-FN 643
L AC H G + +++F MR KYGI +E Y C+I + R G + E + + P
Sbjct: 517 LSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETR 576
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+L +F C + LG A+ L E P + + N +
Sbjct: 577 DNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLY 623
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 244/506 (48%), Gaps = 44/506 (8%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++LR L +K +H I+ G +V+L SL++ Y C AR +F++I +
Sbjct: 8 SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67
Query: 208 NAVS-WNVIVRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQ 265
+ V WN +V Y + + +F ++L I P +FT+ N + A L + G
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IH V++K D VV SL MY K ED+ + D+ ER++ SW +++S + G
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A ELF M E DF + + V++ + ++
Sbjct: 188 AEKALELFGRM----------------------ERSDF---------EPNSVSITVAISA 216
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C+ L ++ GKE+H + ++ + +V++AL+DMY +C L AR F QM +R+ V+
Sbjct: 217 CSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQM-RRKSLVA 275
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN+++ GY RG S+ + + M E TRPS+ T ++L AC+ +L GK +H +VI
Sbjct: 276 WNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVI 335
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R+ + ++ +L+++Y KC ++ A VF ++ V N MI G+ +A++
Sbjct: 336 RSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVD 395
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----CM 620
V+ M G++PD +TF +L C ++ Q S+ +LE E +
Sbjct: 396 VYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSIS-----ESRLETDELLLSAL 450
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTV 646
+ +Y + G +KE N +P V
Sbjct: 451 LDMYSKCGNVKEASRIFNSIPKKDVV 476
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S + + C+ S+ ++ + + ++ +++ I+ Y KCG + A +F
Sbjct: 307 SQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVF 366
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+ + SWN M+ Y G + ++++ M GV + +T+ +VL + ++ L
Sbjct: 367 LKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALE 426
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
KQ+H I + + +L S+L+D Y KC + +A R+F+ I K+ VSW V++ Y
Sbjct: 427 KGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYG 486
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-IKIDFEGDD 279
G +EA+ F +M + ++P TF L AC EG++ + K E
Sbjct: 487 SHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASI 546
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQ-PDERN 309
L ++ + GRL +A G+L Q P+ R+
Sbjct: 547 EQYSCLIDILGRAGRLLEAYGILQQKPETRD 577
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/650 (27%), Positives = 307/650 (47%), Gaps = 72/650 (11%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P+ V N + Y + DAR LF++MPER+ SW M+ Y + G+ ++F
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK-C 191
M+ G+ +Q +A+ L + L V + L L +K GF +V++ +++++ Y +
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
V+ A + F+ + +N +W+ ++ G A+ ++ R+ ++ +
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSI-------- 322
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC +L +CGR++DAR L +Q E ++
Sbjct: 323 -ACR---------------------------TALITGLAQCGRIDDARILFEQIPEPIVV 354
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW ++++GY +G + EA+ELF++MP RN ISW M+AGY ++ +EAL + + ++
Sbjct: 355 SWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSG 414
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+L I C+ + ++ G +VH + N F NAL+ MY KC N+ AR
Sbjct: 415 MLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYAR 474
Query: 432 IWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSEE 461
F +M + RD VSW +++ YA QS E
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNE 534
Query: 462 AMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
AM +F M E P+ LL C ++ + + G+QIH I+ + ++ AL+
Sbjct: 535 AMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC C + + R+F D+ N++I G+ + GREA++++ M+ G+ P+ +T
Sbjct: 595 MYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F G+L AC H G V +FF SM YG+ P EHY CM+ L R G ++ E F+ M
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P P + + C+ + A +G+ AA +L + P + + +N +
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIY 763
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 189/436 (43%), Gaps = 27/436 (6%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S+ + G+ + +AR +FD + ++ ++WN ++ Y G A ++ + ++R
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
T A L L E ++ ++ E + V ++ YV+ G + AR L
Sbjct: 98 ----TGAILLSGYGRLGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRL 149
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D R++ SW S+++GY S ++ +AR LF +MPERN++SW M++GY R +A
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
D M + DQ L+ GL + + + + + + ++ + A+L++Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFE 481
+ ++ I F++ R++ +W+ ++ + G+ + A+ + ++ +
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
T LA C I + E VV AL+ Y + + A +F +
Sbjct: 330 TGLAQCGRIDDAR-------ILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IH 590
+ I MI G+ N R EAL + + + G+ P + I AC +H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442
Query: 591 EGNVKLALQFFDSMRC 606
VK+ Q F+S C
Sbjct: 443 SLAVKVGCQ-FNSFAC 457
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L +C S A +++ + + + + N I Y KCG D+R +FD M ERD
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERD 615
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+WN ++ Y Q+G ++++ M +GV N++T+ +L +
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/650 (27%), Positives = 307/650 (47%), Gaps = 72/650 (11%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P+ V N + Y + DAR LF++MPER+ SW M+ Y + G+ ++F
Sbjct: 154 PSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK-C 191
M+ G+ +Q +A+ L + L V + L L +K GF +V++ +++++ Y +
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
V+ A + F+ + +N +W+ ++ G A+ ++ R+ ++ +
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY---ERDPVKSI-------- 322
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC +L +CGR++DAR L +Q E ++
Sbjct: 323 -ACR---------------------------TALITGLAQCGRIDDARILFEQIPEPIVV 354
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW ++++GY +G + EA+ELF++MP RN ISW M+AGY ++ +EAL + + ++
Sbjct: 355 SWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSG 414
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+L I C+ + ++ G +VH + N F NAL+ MY KC N+ AR
Sbjct: 415 MLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYAR 474
Query: 432 IWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSEE 461
F +M + RD VSW +++ YA QS E
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNE 534
Query: 462 AMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
AM +F M E P+ LL C ++ + + G+QIH I+ + ++ AL+
Sbjct: 535 AMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC C + + R+F D+ N++I G+ + GREA++++ M+ G+ P+ +T
Sbjct: 595 MYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F G+L AC H G V +FF SM YG+ P EHY CM+ L R G ++ E F+ M
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P P + + C+ + A +G+ AA +L + P + + +N +
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIY 763
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 189/436 (43%), Gaps = 27/436 (6%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S+ + G+ + +AR +FD + ++ ++WN ++ Y G A ++ + ++R
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
T A L L E ++ ++ E + V ++ YV+ G + AR L
Sbjct: 98 ----TGAILLSGYGRLGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRL 149
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D R++ SW S+++GY S ++ +AR LF +MPERN++SW M++GY R +A
Sbjct: 150 FDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAW 209
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
D M + DQ L+ GL + + + + + + ++ + A+L++Y
Sbjct: 210 DIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVY 269
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFE 481
+ ++ I F++ R++ +W+ ++ + G+ + A+ + ++ +
Sbjct: 270 SRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALI 329
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
T LA C I + E VV AL+ Y + + A +F +
Sbjct: 330 TGLAQCGRIDDAR-------ILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IH 590
+ I MI G+ N R EAL + + + G+ P + I AC +H
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442
Query: 591 EGNVKLALQFFDSMRC 606
VK+ Q F+S C
Sbjct: 443 SLAVKVGCQ-FNSFAC 457
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L +C S A +++ + + + + N I Y KCG D+R +FD M ERD
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERD 615
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+WN ++ Y Q+G ++++ M +GV N++T+ +L +
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 298/617 (48%), Gaps = 34/617 (5%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
K E T Y P + LN ++ K G + +AR +F++M RD SW ++ Y
Sbjct: 70 KPEQRAPTAYYVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAA 129
Query: 123 FPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
L LF +M SG+ +Q + L++ A + + + LHG VK G +V +
Sbjct: 130 NSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVS 189
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S+LVD Y K +F+++ +N VSW ++ + AG + + F +M R +
Sbjct: 190 SALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVG 249
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
+ TFA AL A + + G IH IK F V+ +L MY KC +
Sbjct: 250 YDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRK------- 302
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
PD Y + LF +M +V+SW ++ Y + + AL
Sbjct: 303 ---PD-------------YVM--------RLFGKMSTPDVVSWTNLIMTYVQMGDEERAL 338
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
D MRK+ ++ T +++ CA L+ K G+++HG R + VSN+++ +Y
Sbjct: 339 DAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLY 398
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG L+ A + F M+ R+D +SW+ +++ Y + ++EA S M E +P++F
Sbjct: 399 SKCGLLQEASLVFDGMT-RKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFAL 457
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
++L+ C +++ LE GKQ+H + + + + AL+ +Y++ L+ A ++F +
Sbjct: 458 ASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKN 517
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D++ +MI G+ + +EA+ +F + G+ PD++TF GIL AC H G V L +
Sbjct: 518 NDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYY 577
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
+ M +Y I P EHY C+I L CR G + E E V MPF + + CR +G
Sbjct: 578 YKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHG 637
Query: 661 YATLGEWAARRLNELNP 677
WAA ++ L+P
Sbjct: 638 DLDRAIWAAEQMLRLHP 654
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 186/633 (29%), Positives = 311/633 (49%), Gaps = 39/633 (6%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
+EA +++++L V+L ++ YGK G + A+ LF+EMP RD SWNA++ Y
Sbjct: 70 IEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGY 129
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
++NG+ LE+F+ M G Q T ++ S + K +HG +K G +
Sbjct: 130 SRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDC 189
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
++++L Y KC + A +F++I K VSWN ++ Y G EA+++F +M +E
Sbjct: 190 RVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKE 249
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ T + L A + L S H +IK F D V+
Sbjct: 250 RVEVNYVTIISLLSANAHLDST------HCYVIKTGFATDASVI---------------- 287
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
TS+V YA G I A L+N MP+RN++S AM++GY
Sbjct: 288 ---------------TSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMG 332
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
++ M + D V + IL+ + I G +H + + ++ V N L+
Sbjct: 333 LVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLI 392
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSK 477
MY K G++ + F +M +++ +SWN+V++ + G++ +AM F +M+ + P
Sbjct: 393 SMYSKFGDIETVFSLFSEMGEKQ-LISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDA 451
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T +LLA C+ + L+ G+++H +V+RN ++ ALV++Y KC LE A RVFK
Sbjct: 452 ITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKS 511
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ N+MI G+ + AL + M+++G+KPD ITF G+L AC H G V
Sbjct: 512 IKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEG 571
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
++F SMR +G+IP L+H CM+ L R G+++E FV M P + + C
Sbjct: 572 KRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCC 631
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ LGE A+RL L+ ++ + + +N +
Sbjct: 632 IHQELKLGECLAKRLLLLDYYSGGLYVLMSNLY 664
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 253/465 (54%), Gaps = 6/465 (1%)
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
KEAV + R D RP ++ + AC + G ++H +F + L
Sbjct: 72 KEAVELLH---RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG L DA+ L D+ R++ SW +++ GYA GR+ +AR+LF+EMP+R+ SWN
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWN 188
Query: 346 AMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
A ++GY +EAL+ F + R ++ TL L A + +++GKE+HG++ R
Sbjct: 189 AAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIR 248
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + + V +ALLD+Y KCG+L AR F QM R D VSW ++ G+ EE
Sbjct: 249 TELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR-DVVSWTTMIHRCFEDGRREEGFL 307
Query: 465 SFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F + MQ RP+++TF +L ACA+ ++ GK++H +++ Y+ ALV +Y+
Sbjct: 308 LFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYS 367
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC A RVF E D++ S+I+G+ N + EAL F L+ + G KPD +T+ G
Sbjct: 368 KCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVG 427
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V L++F S++ K+G++ +HY C+I L R G KE E+ ++ MP
Sbjct: 428 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVK 487
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
P + + CR +G L + AA+ L E+ P P + N
Sbjct: 488 PDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLAN 532
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 227/493 (46%), Gaps = 79/493 (16%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
++D S +Y+ L C +A+ R++ ++ P VF+ NR ++ Y KCG+L
Sbjct: 80 RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLV 139
Query: 95 DA-------------------------------RGLFDEMPERDGGSWNAMLGAYTQNGF 123
DA R LFDEMP+RD SWNA + Y +
Sbjct: 140 DAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQ 199
Query: 124 PGRTLELFLDMN-HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
P LELF M H S+N+ T ++ L +SA L + K++HG +++ + ++ S
Sbjct: 200 PREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWS 259
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+D YGKC + +AR +FD +++++ VSW ++ R G +E ++F +++ +RP
Sbjct: 260 ALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRP 319
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+TFA L AC+ ++ + G ++HG ++ ++ + +L MY KCG AR +
Sbjct: 320 NEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVF 379
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
++ + +++SWTS++ GYA +G+ P+ EAL
Sbjct: 380 NEMHQPDLVSWTSLIVGYAQNGQ-----------PD--------------------EALH 408
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCA-------GLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
F L+ ++ DQVT +L+ C GL KE HG +H D+ +
Sbjct: 409 FFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA------ 462
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE---EAMTSFSEMQWE 472
++D+ + G + A M + DK W ++L G G E A + E++ E
Sbjct: 463 CVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPE 522
Query: 473 TRPSKFTFETLLA 485
+ T + A
Sbjct: 523 NPATYITLANIYA 535
>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
Length = 604
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 178/570 (31%), Positives = 300/570 (52%), Gaps = 46/570 (8%)
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVS 162
++D SWN+M+ AY+Q+G LELF M+ V + ITYA++L S+ E LELG
Sbjct: 1 DKDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSAMELLELG-- 55
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++H + + F + L ++L++ Y KC V+ ARR+FD IQ+ + WN ++ +
Sbjct: 56 KEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQH 115
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFAN-------ALFACSFLSSPY-------------E 262
G +EA+ +F +M E +R + +N ++ A + + S Y
Sbjct: 116 GRAREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFH 175
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW-TSIVSGYA 321
M + GV K D V+G+ + + LE R + +Q I T+++S YA
Sbjct: 176 QMSLEGV--KPDARTFVSVIGACSSLQA----LEKGRAVEEQATSMGIEEGRTALLSLYA 229
Query: 322 ISGRIREARELFNEMPER-NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G + AR++F+++ R NV+SWN+M+A Y +S +EAL+ LM++ D +T
Sbjct: 230 KCGNLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYA 289
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
L C G E+H I + +++F+ A+++MY KCG L +A +F +M +R
Sbjct: 290 GALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKM-RR 348
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
++ V+W+A++ + + G EA+ + M E +PS+ T LAAC+ I +L++GK I
Sbjct: 349 KNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAI 408
Query: 500 HCFV-----IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
H + ++NC + + +L+ +Y KC CL A +F D N++I+G
Sbjct: 409 HSRIQATETLQNC----LFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHA 464
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
H+ E L + G M ++G+ PD++TF +LLAC H G + F SM ++G+
Sbjct: 465 HHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDT 524
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
EHY CM+ L R G ++ E+ V+ MP+ P
Sbjct: 525 EHYLCMVDLLSRAGRVESAEELVHSMPYEP 554
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 228/476 (47%), Gaps = 60/476 (12%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN------RAIECYG-------K 89
+L A L + + + AR++ + + P+P +++ RA E G +
Sbjct: 72 ALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAE 131
Query: 90 CGNLDDA-RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+D A R FD M ++ +WNAM+ +Y Q+G ++L LF M+ GV + T+ +
Sbjct: 132 SVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSLEGVKPDARTFVS 191
Query: 149 VLR--SSAEELELG--VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
V+ SS + LE G V +Q + ++ G ++L+ Y KC + AR +FD +
Sbjct: 192 VIGACSSLQALEKGRAVEEQATSMGIEEG-------RTALLSLYAKCGNLEAARDIFDKL 244
Query: 205 Q-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ KN VSWN ++ Y +G G+EA+ ++ M E ++P + T+A AL AC+ +G
Sbjct: 245 KYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKG 304
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++IH I + D + ++ MY KCG LE A ++ +N ++W+++V +
Sbjct: 305 VEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAF--- 361
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ GY R EALD M ++TL L
Sbjct: 362 -----------------------IQHGYDR-----EALDLYLRMVSEGFQPSEITLAGAL 393
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
C+ + ++ GK +H I + N +F+ N+LL+MY KCG L A F + QRRD
Sbjct: 394 AACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNL-QRRD 452
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
SWN ++ G+A G +E ++ EM Q P TF +L AC++ L++G+
Sbjct: 453 SFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGR 508
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 165/343 (48%), Gaps = 6/343 (1%)
Query: 1 MAGNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVE 60
M + T ++S + SK+L L+ +P + + + + C+S +A+ +
Sbjct: 146 MEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSLEGVKPDART-FVSVIGACSSLQALEK 204
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG-GSWNAMLGAYT 119
R +E + L + Y KCGNL+ AR +FD++ R SWN+M+ AY
Sbjct: 205 GRAVEEQATSMGIEEGRTAL---LSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIAAYA 261
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+G LEL+ M GV + ITYA L + ++H I + +V
Sbjct: 262 QSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRTDVF 321
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
L++++V+ Y KC + A F+ ++ KNAV+W+ +V ++ G +EA+ ++ +M+ E
Sbjct: 322 LDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEG 381
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL-GSLTEMYVKCGRLEDA 298
+P T A AL ACS + + EG IH I + + + L SL MY KCG L A
Sbjct: 382 FQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIA 441
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ R+ SW +I+ G+A G + E L EM + V
Sbjct: 442 NTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGV 484
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA C S + ++ S + VFL + Y KCG L+ A F++M
Sbjct: 288 YAGALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMR 347
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ +W+AM+GA+ Q+G+ L+L+L M G ++IT A L + + L K
Sbjct: 348 RKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKA 407
Query: 165 LHGLIVKRGFCGN-VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H I N + L++SL++ Y KC + A MF ++Q +++ SWN I+ + G
Sbjct: 408 IHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHG 467
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVV 281
+ E + + +M+++ + P TFA L ACS G + H + ++++F D
Sbjct: 468 DVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRG-RSHFLSMEMEFGVAHDTEH 526
Query: 282 LGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIV 317
+ ++ + GR+E A L+ P E + WT+++
Sbjct: 527 YLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLL 563
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 297/588 (50%), Gaps = 42/588 (7%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+D R LFD MP+R+ SWN + G Y + G P LELF+ M G +++ N+ +
Sbjct: 163 VDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPA 222
Query: 153 SAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ + + QL+GL+VK G + ++ + SS +D + + + ARR+FD KN
Sbjct: 223 AVAD-DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTE 281
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGV 269
WN ++ Y+ G EA+ +F K+L PL+ TF +AL A S G Q+HG
Sbjct: 282 VWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGY 341
Query: 270 IIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+IK V+LG +L MY +CG ++
Sbjct: 342 LIKGMHRTLPVILGNALVVMYSRCGN-------------------------------VQT 370
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +LF+ +PE+++++WN M+ + ++ E L V+ M+K+ D VTL +L+ +
Sbjct: 371 AFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSN 430
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWN 447
++++GK+ HG++ R+ S L+DMY K G + A R++ + +RD+V+WN
Sbjct: 431 TGDLQIGKQAHGYLIRHGIEGEGLESY-LIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWN 489
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS-LEQGKQIHCFVIR 505
A++ GY + GQ E+A+ F M + P+ T ++L AC + + GKQIHCF +R
Sbjct: 490 AMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVR 549
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
C + NV AL+++Y+KC + A VF + + +MI G + G++AL +
Sbjct: 550 RCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALAL 609
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M+++G+KPD +TF + AC + G V L + SM +GI +H+ C+ L
Sbjct: 610 FNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMD-SFGISATPQHHCCVADLLA 668
Query: 626 RYGYMKELEDFVNRMPFNPT-VPMLRKIFDKCRKNGYATLGEWAARRL 672
+ G ++E +F+ + V + + C+ G L + ++L
Sbjct: 669 KAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKL 716
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLNRAIECYGKCGNLDDAR 97
P+ + + S+ + ++L L+ + T PV L N + Y +CGN+ A
Sbjct: 313 PLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAF 372
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFD +PE+D +WN M+ A+ QN F L L +M SG +A+ +T VL +S+
Sbjct: 373 DLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTG 432
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN--KNAVSWNVI 215
+L + KQ HG +++ G G LES L+D Y K + A+R+FD +N ++ V+WN +
Sbjct: 433 DLQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAM 491
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP-YEGMQIHGVIIKID 274
+ Y +G ++A+++F ML + P + T A+ L AC + Y G QIH ++
Sbjct: 492 IAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRC 551
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ + V +L +MY KCG + A + ++ +++T+++SG G ++A LFN
Sbjct: 552 LDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFN 611
Query: 335 EMPERNV 341
M E+ +
Sbjct: 612 SMQEKGL 618
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 152/335 (45%), Gaps = 20/335 (5%)
Query: 324 GRIREARELFNEMPERN--VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD---IDQVT 378
GR+ AR L E R + NA+L Y L +EAL L+ + D T
Sbjct: 48 GRLDHARRLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAARPPVRSDHYT 107
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIFVSNALLDMYRKCGNLRSARI---- 432
L CA +++G+ VH + R S + N+LL++Y R AR+
Sbjct: 108 YSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVR 167
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLL-AACANI 490
+ +R+ VSWN + Y + G+ +EA+ F M + RP+ +F + AA A+
Sbjct: 168 RLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADD 227
Query: 491 SSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
S Q++ +++ E ++ + ++++++ ++ A RVF ++ + + N+
Sbjct: 228 PSWP--FQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNT 285
Query: 549 MILGFCHNERGREALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM-RC 606
MI G+ N + EA+++F ++ + D +TF L A +V L Q + +
Sbjct: 286 MITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKG 345
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ +P + ++ +Y R G ++ D +R+P
Sbjct: 346 MHRTLPVILG-NALVVMYSRCGNVQTAFDLFDRLP 379
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRP----SKFTFETLLAACANISSLEQGKQIHCF 502
NA+L YA R EEA+ + + RP +T+ L ACA L G+ +H
Sbjct: 71 NALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAH 130
Query: 503 VIRNCYEI--NVVCRGALVEVYTKC-----CCLEYAIRVFKESSSLDVIICNSMILGFCH 555
++R + V R +L+ +Y ++ R+F +V+ N++ +
Sbjct: 131 MLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVK 190
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI--IPQ 613
R +EALE+F M ++G +P ++F I A + + + Q + + KYG+ I
Sbjct: 191 TGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVAD-DPSWPFQLY-GLLVKYGVEYIND 248
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
L I ++ +G V R++FD+ K
Sbjct: 249 LFVVSSAIDMFSEFG----------------DVQSARRVFDRAAK 277
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 182/633 (28%), Positives = 309/633 (48%), Gaps = 39/633 (6%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R + V +L N + Y G+L DARG+FDEMP R+ SW+ ++ A ++
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 122 GFPGRTLELFLDMNHSGVS--ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G G L LF M G N T A ++ A + +Q+H VK G +
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG---KEAVVMFFKML 236
+ +LVD Y KC + + R F ++ +SW ++ + G+ A+V+F KML
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+ P N TF+ L G Q+HG ++K+ E D + +L MY +CG ++
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ L + + S TS+++ YA +G EA +F +M L G+
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDM-----------LMGHM---- 305
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
IDQ + +L VC+ L ++++ KE+H + +N + + + NA
Sbjct: 306 ----------------PIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNA 349
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
++ +Y KCG++ S+ I F + + +D +SW A+LT Y + S+EA+ F EM +
Sbjct: 350 IVTVYGKCGDIASSEIVFNTL-ENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLES 408
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
S F ++L AC+ SSL G QIH V++ + + ALV +Y KC ++ A+++F
Sbjct: 409 SIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIF 468
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ +I N++I F + A+++F +M++E + PD TF G+L +C G V
Sbjct: 469 NSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVA 528
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
++F M+ KY + P++EHY CM+ L+ R G + F++ MP P + +
Sbjct: 529 EGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588
Query: 656 CRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
CR +G LG AA+++ E+ P P + I ++
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSPYIILSS 621
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 12/304 (3%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
GH+ P+ S L Q+C+S + +++ + + LLN + YGKCG
Sbjct: 303 GHM----PIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++ + +F+ + +D SW A+L Y QN L F +M G+ ++ +VLR
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + L Q+H +VK G + +E++LV Y KC V+ A ++F+ ++N+ +S
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS 478
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVI 270
WN ++ + GN A+ +F M E + P ++TF L +CS + EG + +
Sbjct: 479 WNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMK 538
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNIISWTSIVSGYAISGRI 326
K + E + +++ + GR DA +D QPD+ + W ++++ + G +
Sbjct: 539 TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ---LVWEALLASCRVHGNL 595
Query: 327 REAR 330
R
Sbjct: 596 DLGR 599
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 180/644 (27%), Positives = 322/644 (50%), Gaps = 43/644 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKL------ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
S A + C+ +A+ E +++ ES L P L N I+ Y +CG D A
Sbjct: 11 SACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDES-LLENIVIQMYLRCGCTDLA 69
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL-RSSAE 155
+FD M +++ +W +++ A+T G G + LF M SGVS ++IT+ ++L + S
Sbjct: 70 LDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGR 129
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
E L K++H I++ G+ G+ ++ + +V+ YGKC + A +FD IQ+ N SW +I
Sbjct: 130 ERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTII 189
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-ID 274
+ Y G+ E + + +M + ++P +TF L AC+ + + E +H I
Sbjct: 190 IAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTG 249
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ D V +L +Y KCG LE+A G +F
Sbjct: 250 LDRDAAVGTALINLYGKCGALEEAFG-------------------------------VFV 278
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
++ ++++SW++M+A + +S K A+ + LM + VT +L L +
Sbjct: 279 QIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQY 338
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GKE+H I + YS ++ +++AL+ MY G + +AR F + S+ RD VSW++++ GY+
Sbjct: 339 GKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIF-ESSRERDVVSWSSMIAGYS 397
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ A++ F EM+ + +P+ TF + + ACA + +L +G Q+H V + +V
Sbjct: 398 QNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVP 457
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
ALV +Y KC LE A VF +++ S+ + + N G +L++ M+ +G
Sbjct: 458 VATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQG 517
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
+KPD I F IL++C + G + L +++ M +GI P +EH CM+ + R G ++
Sbjct: 518 MKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAA 577
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
E +N M F ++ + + C+ + AA ++ +L P
Sbjct: 578 EQLINTMKFESSLAWM-MLLTACKAHNDTARAARAAEKIFQLEP 620
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 174/367 (47%), Gaps = 17/367 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ ++ + S KA +++ + +V + V L + ++ Y G ++ AR +F+
Sbjct: 323 FVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSR 382
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SW++M+ Y+QN P R L LF +M GV N +T+ + + + A L Q
Sbjct: 383 ERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH + G +V + ++LV+ YGKC + +A +F ++ KN ++W I Y G+
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--L 282
G ++ + M + ++P F L +C++ +G+ + ++ + DF V
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQ-DFGIAPAVEHC 561
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS---GYAISGRIREARELFNEMPER 339
G + ++ + G+LE A L++ + ++W +++ + + R A E ++ +
Sbjct: 562 GCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPK 621
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
N + + + + + W+ A +T + +D + +L G S I++G VH
Sbjct: 622 NATPYVLLSSVFCAAGSWEAA-------EETRRRMDGRGVQRLL----GRSSIEIGDRVH 670
Query: 400 GFIHRND 406
F+ +D
Sbjct: 671 EFVAASD 677
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 297/588 (50%), Gaps = 42/588 (7%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+D R LFD MP+R+ SWN + G Y + G P LELF+ M G +++ N+ +
Sbjct: 163 VDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPA 222
Query: 153 SAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ + + QL+GL+VK G + ++ + SS +D + + + ARR+FD KN
Sbjct: 223 AVAD-DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTE 281
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGV 269
WN ++ Y+ G EA+ +F K+L PL+ TF +AL A S G Q+HG
Sbjct: 282 VWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGY 341
Query: 270 IIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+IK V+LG +L MY +CG ++
Sbjct: 342 LIKGMHRTLPVILGNALVVMYSRCGN-------------------------------VQT 370
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +LF+ +PE+++++WN M+ + ++ E L V+ M+K+ D VTL +L+ +
Sbjct: 371 AFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSN 430
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWN 447
++++GK+ HG++ R+ S L+DMY K G + A R++ + +RD+V+WN
Sbjct: 431 TGDLQIGKQAHGYLIRHGIEGEGLESY-LIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWN 489
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS-LEQGKQIHCFVIR 505
A++ GY + GQ E+A+ F M + P+ T ++L AC + + GKQIHCF +R
Sbjct: 490 AMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVR 549
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
C + NV AL+++Y+KC + A VF + + +MI G + G++AL +
Sbjct: 550 RCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALAL 609
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M+++G+KPD +TF + AC + G V L + SM +GI +H+ C+ L
Sbjct: 610 FNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMD-SFGISATPQHHCCVADLLA 668
Query: 626 RYGYMKELEDFVNRMPFNPT-VPMLRKIFDKCRKNGYATLGEWAARRL 672
+ G ++E +F+ + V + + C+ G L + ++L
Sbjct: 669 KAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKL 716
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 255/518 (49%), Gaps = 51/518 (9%)
Query: 89 KCGNLDDARGLFDEMPERDGGSW--NAMLGAYTQNGFPGRTLELFLDMNHSG---VSANQ 143
K G LD AR L E R + NA+L AY P L L+ +NH+ V ++
Sbjct: 46 KQGRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDH 105
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDA---- 197
TY+ L + A L + + +H +++R +L +SL++ Y + +A
Sbjct: 106 YTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDV 165
Query: 198 -RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+FD + +N VSWN + Y+ G +EA+ +F +ML + RP +F N +F +
Sbjct: 166 VRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVN-IFPAAV 224
Query: 257 LSSPYEGMQIHGVIIK--IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
P Q++G+++K +++ D V+ S +M+ + G ++ AR + D+ ++N W
Sbjct: 225 ADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWN 284
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++++GY +G+ EA +LF++ ++ +
Sbjct: 285 TMITGYVQNGQFSEAIDLFSK------------------------------ILGSREVPL 314
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIW 433
D VT L + ++ +G+++HG++ + + + + + NAL+ MY +CGN+++A
Sbjct: 315 DVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDL 374
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F ++ + +D V+WN ++T + + E + EMQ T +L+A +N
Sbjct: 375 FDRLPE-KDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGD 433
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK--ESSSLDVIICNSMI 550
L+ GKQ H ++IR+ E + L+++Y K +E A RVF +++ D + N+MI
Sbjct: 434 LQIGKQAHGYLIRHGIEGEGL-ESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMI 492
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
G+ + + +A+ VF M + G++P +T +L AC
Sbjct: 493 AGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 530
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLNRAIECYGKCGNLDDAR 97
P+ + + S+ + ++L L+ + T PV L N + Y +CGN+ A
Sbjct: 313 PLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAF 372
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFD +PE+D +WN M+ A+ QN F L L +M SG +A+ +T VL +S+
Sbjct: 373 DLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTG 432
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN--KNAVSWNVI 215
+L + KQ HG +++ G G LES L+D Y K + A+R+FD +N ++ V+WN +
Sbjct: 433 DLQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAM 491
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP-YEGMQIHGVIIKID 274
+ Y +G ++A+++F ML + P + T A+ L AC + Y G QIH ++
Sbjct: 492 IAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRC 551
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ + V +L +MY KCG + A + ++ +++T+++SG G ++A LFN
Sbjct: 552 LDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFN 611
Query: 335 EMPERNV 341
M E+ +
Sbjct: 612 SMQEKGL 618
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 152/335 (45%), Gaps = 20/335 (5%)
Query: 324 GRIREARELFNEMPERN--VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD---IDQVT 378
GR+ AR L E R + NA+L Y L +EAL L+ + D T
Sbjct: 48 GRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDHYT 107
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIFVSNALLDMYRKCGNLRSARI---- 432
L CA +++G+ VH + R S + N+LL++Y R AR+
Sbjct: 108 YSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVR 167
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLL-AACANI 490
+ +R+ VSWN + Y + G+ +EA+ F M + RP+ +F + AA A+
Sbjct: 168 RLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADD 227
Query: 491 SSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
S Q++ +++ E ++ + ++++++ ++ A RVF ++ + + N+
Sbjct: 228 PSWP--FQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNT 285
Query: 549 MILGFCHNERGREALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM-RC 606
MI G+ N + EA+++F ++ + D +TF L A +V L Q + +
Sbjct: 286 MITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKG 345
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ +P + ++ +Y R G ++ D +R+P
Sbjct: 346 MHRTLPVILG-NALVVMYSRCGNVQTAFDLFDRLP 379
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRP----SKFTFETLLAACANISSLEQGKQIHCF 502
NA+L YA R EEA+ ++ + RP +T+ L ACA L G+ +H
Sbjct: 71 NALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAH 130
Query: 503 VIRNCYEI--NVVCRGALVEVYTKC-----CCLEYAIRVFKESSSLDVIICNSMILGFCH 555
++R + V R +L+ +Y ++ R+F +V+ N++ +
Sbjct: 131 MLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVK 190
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI--IPQ 613
R +EALE+F M ++G +P ++F I A + + + Q + + KYG+ I
Sbjct: 191 TGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVAD-DPSWPFQLY-GLLVKYGVEYIND 248
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
L I ++ +G V R++FD+ K
Sbjct: 249 LFVVSSAIDMFSEFG----------------DVQSARRVFDRAAK 277
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 188/657 (28%), Positives = 317/657 (48%), Gaps = 46/657 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + CA + + +V VF+ N + YG G + DA LFD MP
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQI-TYANVLRSSAEELELG 160
ER+ SWN+M+ ++ NGF + L +M N G + T VL A E E+G
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ K +HG VK ++L ++L+D Y KC +T+A+ +F NKN VSWN +V +
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 221 VAGNGKEAVVMFFKMLR--EDIRPLNFTFANALFAC---SFLSSPYEGMQIHGVIIKIDF 275
G+ + +ML ED++ T NA+ C SFL S E +H +K +F
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE---LHCYSLKQEF 426
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+++V + Y KCG L A+ +F+
Sbjct: 427 VYNELVANAFVASYAKCGSLS-------------------------------YAQRVFHG 455
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ + V SWNA++ G+ +S + +LD M+ + D T+ +L+ C+ L +++G
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
KEVHGFI RN ++FV ++L +Y CG L + + F M + + VSWN V+TGY +
Sbjct: 516 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQ 574
Query: 456 RGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G + A+ F +M + + + + AC+ + SL G++ H + +++ E +
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+L+++Y K + + +VF N+MI+G+ + +EA+++F M++ G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM-KEL 633
PD +TF G+L AC H G + L++ D M+ +G+ P L+HY C+I + R G + K L
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
M V + + + CR + +GE A +L EL P P + + +N +
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 257/518 (49%), Gaps = 40/518 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHS 137
L R I Y CG+ DD+R +FD + ++ WNA++ +Y++N LE F++M + +
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + TY V+++ A ++G+ +HGL+VK G +V + ++LV YG +TDA
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFA 253
++FD + +N VSWN ++R + G +E+ ++ +M+ E+ P T L
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ G +HG +K+ + + V+ +L +MY KCG + +A+ + + +N++SW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
++V G++ G ++ + MLAG +D
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQ-----------MLAG--------------------GED 390
Query: 374 I--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D+VT+ + VC S + KE+H + + ++ N V+NA + Y KCG+L A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F+ + + SWNA++ G+A+ ++ + +M+ P FT +LL+AC+ +
Sbjct: 451 RVFHGIRSKTVN-SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
SL GK++H F+IRN E ++ +++ +Y C L +F ++ N++I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
G+ N AL VF M GI+ I+ + AC
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 217/449 (48%), Gaps = 41/449 (9%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNV-ILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L++S + ++ + +++H L+ N +L + ++ Y C D+R +FD +++K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI 266
N WN ++ Y E + F +M+ D+ P +FT+ + AC+ +S G+ +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG++ VK G +ED + ++VS Y G +
Sbjct: 210 HGLV-------------------VKTGLVED------------VFVGNALVSFYGTHGFV 238
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD----IDQVTLGLI 382
+A +LF+ MPERN++SWN+M+ ++ + +E+ + M + D D TL +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L VCA EI +GK VHG+ + + ++NAL+DMY KCG + +A++ F +M+ ++
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKN 357
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQI 499
VSWN ++ G++ G + +M + + + T + C + S L K++
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
HC+ ++ + N + A V Y KC L YA RVF S V N++I G +
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLAC 588
R +L+ MK G+ PD T +L AC
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 209/468 (44%), Gaps = 56/468 (11%)
Query: 30 ISGHLKSDEPVSYSLYAHL-----------------FQLCASSKAIVEARKLESNLVTFY 72
I GH +S++P SL AHL C+ K++ +++ ++ +
Sbjct: 468 IGGHAQSNDP-RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
+F+ + Y CG L + LFD M ++ SWN ++ Y QNGFP R L +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ I+ V + + L + ++ H +K + + SL+D Y K
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+T + ++F+ ++ K+ SWN ++ Y + G KEA+ +F +M R P + TF L
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL--DQPDERN 309
AC+ +EG++ + + + + + +M + G+L+ A ++ + +E +
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 310 IISWTSIVSGYAISGRI----REARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDF 363
+ W S++S I + + A +LF PE+ N + + + AG + W++
Sbjct: 767 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK---WED---- 819
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+RK + +++++ L AG S I++ ++V F+ V LD + +
Sbjct: 820 ---VRKVRQRMNEMS----LRKDAGCSWIELNRKVFSFV----------VGERFLDGFEE 862
Query: 424 CGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYAR----RGQSEEAMTSF 466
+L S + +M R D +S L+ + RG SE+ ++
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 910
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 16/231 (6%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIH-----RNDYSSNIFVSNALLDMYRKCGNLRSARI 432
LGL+L +I+MG+++H + RND + ++ MY CG+ +R
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD----VLCTRIITMYAMCGSPDDSRF 141
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANI 490
F + + ++ WNAV++ Y+R +E + +F EM T P FT+ ++ ACA +
Sbjct: 142 VFDAL-RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
S + G +H V++ +V ALV Y + A+++F +++ NSMI
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 551 LGFCHNERGREALEVFGLMKKE----GIKPDHITFHGILLACIHEGNVKLA 597
F N E+ + G M +E PD T +L C E + L
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 483 LLAACANISSLEQGKQIHCFV-----IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
LL A +E G++IH V +RN +V+C ++ +Y C + + VF
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRN---DDVLCT-RIITMYAMCGSPDDSRFVFDA 145
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S ++ N++I + NE E LE F ++ + PDH T+ ++ AC +V +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L + K G++ + ++ Y +G++ + + MP
Sbjct: 206 GLA-VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 172/597 (28%), Positives = 296/597 (49%), Gaps = 43/597 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDG-GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQIT 145
Y KCG++ AR +FD MP + WN ++G Y + +L LF M+ G++ ++
Sbjct: 353 YVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHA 412
Query: 146 YANVLR-----SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ +L+ S A + + HG +VK GF + ++L+ Y K ++ +A +
Sbjct: 413 LSCLLKCITCLSCARDGLVA-----HGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLV 467
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + +++ +SWN ++ G EA+ +F +M + + T + L AC+
Sbjct: 468 FDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYW 527
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+ G +HG +K G+ + +L +MY C W S
Sbjct: 528 FVGRVVHGYSVKTGLIGETSLANALLDMYSNCS------------------DWHS----- 564
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
++F M ++NV+SW AM+ YTR+ L+ + + M D +
Sbjct: 565 --------TNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVT 616
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L+ AG +K GK VHG+ RN + V+NAL++MY C N+ AR+ F ++ +
Sbjct: 617 SVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNK 676
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIH 500
D +SWN ++ GY+R + E+ + FS+M + +P+ T +L A A+ISSLE+G++IH
Sbjct: 677 -DIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIH 735
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ +R + + ALV++Y KC L A +F + ++I MI G+ + G+
Sbjct: 736 AYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGK 795
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
+A+ +F M+ G++PD +F IL AC H G +FF++MR +Y I P+L+HY C+
Sbjct: 796 DAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCI 855
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L G +KE +F+ MP P + + CR + L E A R+ +L P
Sbjct: 856 VDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEP 912
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 163/619 (26%), Positives = 270/619 (43%), Gaps = 70/619 (11%)
Query: 1 MAGNAATILKNILSKSSPKPTPSKTLTKTISGHLK----------------SDEPVSYSL 44
+A A +++ + SP+ PS+ L+ ++ ++ SD V
Sbjct: 37 LAPPAGQVIEAAAAAPSPRNPPSRVLSSDVNLRIQRLCQAGDLAAALRLLGSDGGVGVRS 96
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPV--FLLNRAIECYGKCGNLDDARGLFDE 102
Y + QLC +++ AR+ + LV + L R + Y KCG+L AR +FDE
Sbjct: 97 YCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155
Query: 103 MPER--DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
MP R D W +++ AY + G + LF M GVS + + VL+ A +
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +HGL+ K G + ++L+ Y +C M DA ++FD + ++A+SWN + Y
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI----DFE 276
G AV +F KM E + T + L AC+ L G +HG +K D E
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335
Query: 277 ----GDDVVLGS-LTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREAR 330
G D LGS L MYVKCG + AR + D P + N+ W I+ GYA + E+
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LF +M E + D+ L +L LS
Sbjct: 396 LLFEQMHELGITP-------------------------------DEHALSCLLKCITCLS 424
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G HG++ + + + V NAL+ Y K + +A + F +M +D +SWN+V+
Sbjct: 425 CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH-QDTISWNSVI 483
Query: 451 TGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+G G + EA+ F M + T ++L ACA G+ +H + ++
Sbjct: 484 SGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLI 543
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
AL+++Y+ C ++F+ + +V+ +MI + R +V GL+
Sbjct: 544 GETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSY---TRAGLFDKVAGLL 600
Query: 570 KK---EGIKPDHITFHGIL 585
++ +GIKPD +L
Sbjct: 601 QEMVLDGIKPDVFAVTSVL 619
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 203/459 (44%), Gaps = 48/459 (10%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI---LESSLVDAYGKCMVMTDARRMF 201
+Y V++ EE L +++ H L+ R G +I L LV AY KC + AR +F
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHALV--RAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVF 153
Query: 202 DDIQNK--NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
D++ + + W ++ Y AG+ +E V +F +M + P + L + L S
Sbjct: 154 DEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGS 213
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
EG IHG++ K+ V +L +Y +CG +EDA
Sbjct: 214 ITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAM-------------------- 253
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
++F+ M R+ ISWN+ ++GY + A+D M +I VT+
Sbjct: 254 -----------QVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTV 302
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRN----DYSS-----NIFVSNALLDMYRKCGNLRSA 430
+L CA L +GK VHG+ ++ D S + + + L+ MY KCG++ SA
Sbjct: 303 LSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSA 362
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
R F M + + WN ++ GYA+ + EE++ F +M + P + LL
Sbjct: 363 RRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITC 422
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+S G H ++++ + AL+ Y K ++ A+ VF D I NS+
Sbjct: 423 LSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSV 482
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
I G N EA+E+F M +G + D T +L AC
Sbjct: 483 ISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPAC 521
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 5/298 (1%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N ++ Y C + +F M +++ SW AM+ +YT+ G + L +M G
Sbjct: 548 LANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDG 607
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + +VL A + L K +HG ++ G + + ++L++ Y C M +AR
Sbjct: 608 IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEAR 667
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+FD + NK+ +SWN ++ Y E+ +F ML + +P T L A + +S
Sbjct: 668 LVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASIS 726
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S G +IH ++ F D +L +MYVKCG L AR L D+ ++N+ISWT +++
Sbjct: 727 SLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIA 786
Query: 319 GYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
GY + G ++A LF +M E + S++A+L S L E F MRK K
Sbjct: 787 GYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYK 844
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 159/363 (43%), Gaps = 26/363 (7%)
Query: 316 IVSGYAISGRIREARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+V Y G + AR +F+EMP R +V W ++++ Y ++ ++E + M+
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D + +L A L I G+ +HG + + V+NAL+ +Y +CG + A
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F M RD +SWN+ ++GY G + A+ FS+M E T S T ++L ACA +
Sbjct: 256 FDSM-HARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314
Query: 493 LEQGKQIHCFVIRN--CYEINVVCRG-------ALVEVYTKCCCLEYAIRVFKE-SSSLD 542
GK +H + +++ +++ V G LV +Y KC + A RVF S +
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVKLA 597
V + N ++ G+ E+L +F M + GI PD +L L+C +G V
Sbjct: 375 VHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVA-- 432
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
K G Q +I Y + + +RMP T+ + C
Sbjct: 433 ----HGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISW-NSVISGCT 487
Query: 658 KNG 660
NG
Sbjct: 488 SNG 490
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 17/262 (6%)
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVS-WNAVLTGYARRGQSEEAMTSFSEMQW-ETR 474
L+ Y KCG+L AR+ F +M R V W ++++ YA+ G +E ++ F +MQ
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P +L A++ S+ +G+ IH + + AL+ +Y++C C+E A++V
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + D I NS I G+ N A+++F M EG + +T +L AC G
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG-F 314
Query: 595 KLALQFFDSMRCKYGIIPQLEHYEC---------MIKLYCRYGYMKELEDFVNRMPFNPT 645
+L + K G++ LE + ++ +Y + G M + MP
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374
Query: 646 VPMLRKIFDKCRKNGYATLGEW 667
V + I GYA E+
Sbjct: 375 VHVWNLIM-----GGYAKAAEF 391
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 326/636 (51%), Gaps = 45/636 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF C + A +KL + L+ F + + L + I Y G++ +R FD + +++
Sbjct: 28 LFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84
Query: 108 GGSWNAMLGAYTQNGFPGRTL----ELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
SWN+++ AY + G + +LF + + T+ +L++ ++ K
Sbjct: 85 IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H + K GF +V + +SLV Y + V+ A ++F D+ K+ SWN ++ + G
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
N A+ + +M E ++ T A+ L C+ G+ IH ++K + D V
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY K GRL+D A+ +F++M R+++S
Sbjct: 262 ALINMYSKFGRLQD-------------------------------AQMVFDQMEVRDLVS 290
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN+++A Y ++ AL F M+ D +T+ + ++ + LS+ ++ + + GF+
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 404 RNDY-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R ++ ++ + NAL++MY K G + A F Q+ R+D +SWN ++TGY + G + EA
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNGLASEA 409
Query: 463 MTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ +++ M+ +T P++ T+ +++ A +++ +L+QG +IH +I+N ++V L++
Sbjct: 410 IDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLID 469
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC LE A+ +F E + N++I + RG EAL++F M E +K DHIT
Sbjct: 470 LYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHIT 529
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L AC H G V + FD M+ +YGI P L+HY CM+ L R GY+++ + V M
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM 589
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
P P + + C+ G A LG A+ RL E++
Sbjct: 590 PIQPDASIWGALLSACKIYGNAELGTLASDRLLEVD 625
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 8/331 (2%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + +CA S ++ + +++ VF+ N I Y K G L DA+ +FD+M
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
RD SWN+++ AY QN P L F M G+ + +T ++ ++ + +S+ +
Sbjct: 286 RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345
Query: 166 HGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
G +++R + +V++ ++LV+ Y K M A +FD + K+ +SWN +V Y G
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGL 405
Query: 225 GKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
EA+ + M+ E D P T+ + + A S + + +GM+IH +IK D V
Sbjct: 406 ASEAIDA-YNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA 464
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV- 341
L ++Y KCGRLEDA L + + W +I++ I GR EA +LF +M V
Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVK 524
Query: 342 ---ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
I++ ++L+ + S L E +M+K
Sbjct: 525 ADHITFVSLLSACSHSGLVDEGQKCFDIMQK 555
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 245/428 (57%), Gaps = 3/428 (0%)
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G ++H +F V+ L MY KCG L DA+ L D+ ++++ SW +++SGYA
Sbjct: 82 GKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYAN 141
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT-TKDIDQVTLGL 381
GRI +AR+LF+EMP R+ SWNA+++GY + EALD +M++ + + + TL
Sbjct: 142 VGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
L A +S ++ GKE+HG++ R+ + V ALLD+Y KCG+L AR F QM+ +
Sbjct: 202 ALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADK- 260
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIH 500
D VSW ++ G+ +E + F + M RP+++TF +L ACA++++ + GK++H
Sbjct: 261 DIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVH 320
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
++ R Y+ ALV VY+KC E A RVF + D++ S+I+G+ N +
Sbjct: 321 GYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPD 380
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL+ F + + G KPD ITF G+L AC H G V + L++F S++ K+G++ +HY C+
Sbjct: 381 MALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACV 440
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
I L R G KE E+ ++ MP P + + CR +G L E AA+ L EL P P
Sbjct: 441 IDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENP 500
Query: 681 FQFKITTN 688
+ +N
Sbjct: 501 ATYITLSN 508
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 222/472 (47%), Gaps = 53/472 (11%)
Query: 26 LTKTISGHLKSDEPVSYSLYAH-LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI 84
L K + H K+ + + ++ L + A ++V+A+ L + P + N I
Sbjct: 81 LGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEI----PQKDLCSWNTMI 136
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQ 143
Y G ++ AR LFDEMP RD SWNA++ Y G+ L+LF M + S N
Sbjct: 137 SGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNM 196
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T ++ L ++A L K++HG +++ G + ++ ++L+D YGKC + +AR +FD
Sbjct: 197 FTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQ 256
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +K+ VSW ++ R G KE +F ++ +RP +TFA L AC+ L++ G
Sbjct: 257 MADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMG 316
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++HG + ++ ++ +L +Y KCG E AR + +Q +++SWTS++ GYA +
Sbjct: 317 KEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQN 376
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G+ A + F L+R TK D++T +L
Sbjct: 377 GQPDMALQFFES------------------------------LLRSGTKP-DEITFVGVL 405
Query: 384 NVC--AGLSEIKMG-----KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ C AGL +I + KE HG +H D+ + ++D+ + G + A
Sbjct: 406 SACTHAGLVDIGLEYFHSVKEKHGLVHTADHYA------CVIDLLARSGRFKEAENIIDN 459
Query: 437 MSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTFETLLA 485
M + DK W ++L G G +E A + E++ E + T + A
Sbjct: 460 MPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYA 511
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 219/485 (45%), Gaps = 98/485 (20%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
Y+ ++ + +L + K++H F +++ + L+ Y KC + DA+ +FD+I
Sbjct: 66 YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN--------------------- 244
K+ SWN ++ Y G ++A +F +M D N
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRM 185
Query: 245 -----------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
FT ++AL A + +SS G +IHG +I+ E D+VV +L ++Y KCG
Sbjct: 186 MQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG 245
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
L +ARG+ DQ +++I+SWT+++ GR +E LF ++ V
Sbjct: 246 SLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRP---------- 295
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
++ T +LN CA L+ +MGKEVHG++ R Y F
Sbjct: 296 ---------------------NEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWE 472
++AL+ +Y KCGN +AR F QM R D VSW +++ GYA+ GQ + A+ F S ++
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSG 393
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
T+P + TF +L+AC + ++ G + Y +V + LV C+
Sbjct: 394 TKPDEITFVGVLSACTHAGLVDIGLE---------YFHSVKEKHGLVHTADHYACV---- 440
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+D++ + R +EA + M +KPD + +L C G
Sbjct: 441 --------IDLL---------ARSGRFKEAENIIDNMP---MKPDKFLWASLLGGCRIHG 480
Query: 593 NVKLA 597
N++LA
Sbjct: 481 NIELA 485
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+PS + TL+AAC LE GK++H + + +V L+ +Y KC L A
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F E D+ N+MI G+ + R +A ++F M D+ +++ ++ + +G
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGW 175
Query: 594 VKLALQFFDSMR 605
AL F M+
Sbjct: 176 YMEALDLFRMMQ 187
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 188/623 (30%), Positives = 313/623 (50%), Gaps = 41/623 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ + + + + G DDA+ +F++M R+ S N ++ + ++F +M
Sbjct: 317 LYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK- 375
Query: 137 SGVSANQITYANVLRSSAE--ELELGVSK--QLHGLIVKRGFCGN-VILESSLVDAYGKC 191
V N +Y +L + +E LE G K ++H +++ G N V + + LV+ Y K
Sbjct: 376 DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 435
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ DA +F+ + K++VSWN ++ ++A F +M R P NFT + L
Sbjct: 436 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTL 495
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+C+ L G QIH +K+ + D V +L +Y
Sbjct: 496 SSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALY---------------------- 533
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKT 370
A +G E ++F+ MPE + +SWN+++ + S +A+ + M +
Sbjct: 534 ---------AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRG 584
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+ +VT IL+ + LS ++ ++H + + S + + NALL Y KCG +
Sbjct: 585 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNEC 644
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACAN 489
F +MS+ RD+VSWN++++GY +AM + MQ R FTF T+L+ACA+
Sbjct: 645 EKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACAS 704
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+++LE+G ++H IR C E +VV ALV++Y+KC ++YA R F+ +V NSM
Sbjct: 705 VATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSM 764
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + G +AL++F M +G PDH+TF G+L AC H G V+ + F SM Y
Sbjct: 765 ISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYR 824
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEW 667
+ P++EH+ CM+ L R G + E+ DF+N MP P V + R + CR NG T LG
Sbjct: 825 LSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRR 884
Query: 668 AARRLNELNPWAPFQFKITTNRF 690
AA L EL P + + N +
Sbjct: 885 AAEMLLELEPQNAVNYVLLANMY 907
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 175/659 (26%), Positives = 299/659 (45%), Gaps = 66/659 (10%)
Query: 9 LKNILSKSSPKPTPSKTLT------KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEAR 62
LK++L K +K+L KT + H + S + L S EAR
Sbjct: 32 LKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEAR 91
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+L + + +FL N I Y + G+L A+ LFDEM R+ +W ++ YTQNG
Sbjct: 92 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 151
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEE----LELGVSKQLHGLIVKRGFCGNV 178
P F DM +G N + + LR+ E +LGV Q+HGLI K + +V
Sbjct: 152 KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGV--QIHGLISKTRYGSDV 209
Query: 179 ILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
++ + L+ YG C+ DAR +FD I +N++SWN I+ Y G+ A +F M +
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 238 EDI----RPLNFTFANAL-FACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLGSLTEMYVK 291
E + +P +TF + + ACS + + Q+ + K F D V +L + +
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER---NVISWNAML 348
G +DA+ + +Q RN++S ++ G + A ++F+EM + N S+ +L
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLL 389
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
+ ++ + +E + G+EVH + R +
Sbjct: 390 SAFSEFSVLEEGR-------------------------------RKGREVHAHVIRTGLN 418
Query: 409 SN-IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
N + + N L++MY K G + A F M + +D VSWN++++G + SE+A SF
Sbjct: 419 DNKVAIGNGLVNMYAKSGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAESFH 477
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ + PS FT + L++CA++ + G+QIHC ++ + +V AL+ +Y +
Sbjct: 478 RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 537
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERG-REALEVFGLMKKEGIKPDHITFHGIL 585
C ++VF D + NS+I +E +A++ F M + G +TF IL
Sbjct: 538 CFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINIL 597
Query: 586 LAC----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
A +HE + ++ ++ KY + ++ Y + G M E E RM
Sbjct: 598 SAVSSLSLHEVSHQI-----HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 651
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 227/494 (45%), Gaps = 47/494 (9%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+++LH +K GF GN+ L ++L++ Y + + A+++FD++ N+N V+W ++ Y
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFAC--SFLSSPYEGMQIHGVIIKIDFEGDD 279
G EA F M+R P ++ F +AL AC S S G+QIHG+I K + D
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 280 VVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VV L MY C DAR + D RN ISW SI+S Y+ G A +LF+ M
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ- 268
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG-LILNVCAGLSEIKMG-- 395
KE L F F ++ T G LI C S + G
Sbjct: 269 -------------------KEGLGFSF-------KPNEYTFGSLITTAC---SSVDFGLC 299
Query: 396 --KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+++ + ++ + +++VS+AL+ + + G A+ F QM R+ VS N ++ G
Sbjct: 300 VLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGV-RNVVSMNGLMVGL 358
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ----GKQIHCFVIRNCYE 509
++ Q E A F EM+ + ++ LL+A + S LE+ G+++H VIR
Sbjct: 359 VKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 418
Query: 510 INVVCRG-ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
N V G LV +Y K + A VF+ D + NS+I G NE +A E F
Sbjct: 419 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHR 478
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFF-DSMRCKYGIIPQLEHYECMIKLYCRY 627
M++ G P + T L +C G + L Q D + K G+ + ++ LY
Sbjct: 479 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL--KLGLDTDVSVSNALLALYAET 536
Query: 628 GYMKELEDFVNRMP 641
G E + MP
Sbjct: 537 GCFTECLKVFSLMP 550
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+E+H + + N+F+SN L+++Y + G+L SA+ F +MS R+ V+W +++GY
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSN-RNLVTWACLISGYT 148
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAAC--ANISSLEQGKQIHCFVIRNCYEIN 511
+ G+ +EA F +M + P+ + F + L AC + S + G QIH + + Y +
Sbjct: 149 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 208
Query: 512 VVCRGALVEVYTKCC-CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
VV L+ +Y C A VF + I NS+I + A ++F M+
Sbjct: 209 VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 268
Query: 571 KEGI----KPDHITFHGIL-LACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIK 622
KEG+ KP+ TF ++ AC +V L + M K G + L ++
Sbjct: 269 KEGLGFSFKPNEYTFGSLITTAC---SSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVS 325
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPM 648
+ R+G + ++ +M V M
Sbjct: 326 GFARFGLTDDAKNIFEQMGVRNVVSM 351
>gi|147773389|emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 186/637 (29%), Positives = 313/637 (49%), Gaps = 71/637 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + CA + + + R++ +V VF+ N + YG CG L DA +FDEMP
Sbjct: 44 FPFVLKACADAFEVRKGREVHGXVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMP 103
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEELELGVSK 163
E+D SWN M+G ++ NG L+LF +M SG+ N ++ +VL A + +
Sbjct: 104 EKDLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTAS 163
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++HG +VK G VI+ ++L+D YGKC + +++F ++ KN VSWN I+ + G
Sbjct: 164 EIHGYVVKVGLEFQVIVGNALLDVYGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKG 223
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ ++A+ MF M+ E ++P + T ++ L L G ++HG I++ E D +
Sbjct: 224 HYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIAN 283
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY K SG EA +F ++ +NV+S
Sbjct: 284 SLIDMYAK-------------------------------SGHSTEASNVFYKLDAKNVVS 312
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAM+A + ++ A+ V M+ + + VT +L CA + ++ GKE+H
Sbjct: 313 WNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSI 372
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ ++FVSNAL DMY K G+L+ AR F + RD+VS+N ++ G ++ E++
Sbjct: 373 HMGCAFDLFVSNALTDMYAKSGHLKLARNVFD--TSLRDEVSYNILIVGXSQTSDCSESL 430
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ FSEMQ + +F L+ACAN+++++QGK+IH F++R + I++ +L++ Y
Sbjct: 431 SLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFY 490
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL-MKKEGIKPDH-IT 580
TKC + A +F ++ DV N+MILG+ A+++ M+K+ ++ D ++
Sbjct: 491 TKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLLTENMRKDDVESDDSVS 550
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L AC H R G M+E + + +
Sbjct: 551 FIAVLSACSH----------------------------------GRAGLMEEAAELIKGL 576
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P P + + CR G L WAA L EL P
Sbjct: 577 PIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKP 613
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 207/428 (48%), Gaps = 42/428 (9%)
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
A WN ++R Y +AG G + ++ +M+R +RP + TF L AC+ +G ++HG
Sbjct: 7 AFLWNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHG 65
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
++K+ FE D V +L Y CG L D +GR+
Sbjct: 66 XVVKLGFESDVFVGNTLLSFYGNCGGLRD-------------------------AGRV-- 98
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR-KTTKDIDQVTLGLILNVCA 387
F+EMPE++++SWN M+ ++ + W E LD MR ++ + V++ +L VCA
Sbjct: 99 ----FDEMPEKDLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCA 154
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
G+ + E+HG++ + + V NALLD+Y KCGN+ + + F +M ++ + VSWN
Sbjct: 155 GVEDEVTASEIHGYVVKVGLEFQVIVGNALLDVYGKCGNVAALKQVFGEMVEK-NLVSWN 213
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
A++T + +G +A+ F M E +P+ T + L + + G+++H IR
Sbjct: 214 AIITSFGYKGHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRM 273
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
E ++ +L+++Y K A VF + + +V+ N+MI F N A+ +
Sbjct: 274 GLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLV 333
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD---SMRCKYGIIPQLEHYECMIKL 623
M+ G P+ +TF +L AC G V+ + M C + + + +
Sbjct: 334 RQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVS----NALTDM 389
Query: 624 YCRYGYMK 631
Y + G++K
Sbjct: 390 YAKSGHLK 397
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 147/297 (49%), Gaps = 17/297 (5%)
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN ++ GY+ + + L+ M + D T +L CA E++ G+EVHG +
Sbjct: 10 WNTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGXVV 68
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + S++FV N LL Y CG LR A F +M ++ D VSWN ++ ++ G E +
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK-DLVSWNTMIGVFSVNGCWXEVL 127
Query: 464 TSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F EM+ + RP+ + ++L CA + +IH +V++ E V+ AL++V
Sbjct: 128 DLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGNALLDV 187
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC + +VF E +++ N++I F + R+AL++F LM EG+KP+ IT
Sbjct: 188 YGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSITI 247
Query: 582 HGILLACIHEGNVKLALQFFDSMR------CKYGIIPQLEHYECMIKLYCRYGYMKE 632
L V + L+FF + R + G+ + +I +Y + G+ E
Sbjct: 248 SSFL-------PVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTE 297
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 182/633 (28%), Positives = 310/633 (48%), Gaps = 39/633 (6%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R + V +L N + Y G+L DARG+FDEMP R+ SW+ ++ A ++
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81
Query: 122 GFPGRTLELFLDMNHSGVS--ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G G L LF M G N T A ++ A + +Q+H VK G +
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG---KEAVVMFFKML 236
+ +LVD Y KC + + R F ++ +SW ++ + G+ A+V+F KML
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+ P N TF+ L G Q+HG ++K+ E D + +L MY +CG ++
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ L + + S TS+++ YA +G EA +F +M L G+
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDM-----------LMGHM---- 305
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
IDQ + +L VC+ L ++++ KE+H + +N + + + NA
Sbjct: 306 ----------------PIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNA 349
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
++ +Y KCG++ S+ I F + + +D +SW A+LT Y + S+EA+ F EM +
Sbjct: 350 IVTVYGKCGDIASSEIVFNTL-ENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLES 408
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
S F ++L AC+ SSL G QIH V++ + + ALV +Y KC ++ A+++F
Sbjct: 409 SIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIF 468
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ + +I N++I F + A+++F +M++E + PD TF G+L +C G V
Sbjct: 469 NSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVA 528
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
++F M+ KY + P++EHY CM+ L+ R G + F++ MP P + +
Sbjct: 529 EGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588
Query: 656 CRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
CR +G LG AA+++ E+ P P + I ++
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSPYIILSS 621
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
GH+ P+ S L Q+C+S + +++ + + LLN + YGKCG
Sbjct: 303 GHM----PIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++ + +F+ + +D SW A+L Y QN L F +M G+ ++ +VLR
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + L Q+H +VK G + +E++LV Y KC V+ A ++F+ +N+ +S
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIIS 478
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVI 270
WN ++ + GN A+ +F M E + P ++TF L +CS + EG + +
Sbjct: 479 WNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMK 538
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNIISWTSIVSGYAISGRI 326
K + E + +++ + GR DA +D QPD+ + W ++++ + G +
Sbjct: 539 TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ---LVWEALLASCRVHGNL 595
Query: 327 REAR 330
R
Sbjct: 596 DLGR 599
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 182/633 (28%), Positives = 309/633 (48%), Gaps = 39/633 (6%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R + V +L N + Y G+L DARG+FDEMP R+ SW+ ++ A ++
Sbjct: 22 RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81
Query: 122 GFPGRTLELFLDMNHSGVS--ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G G L LF M G N T A ++ A + +Q+H VK G +
Sbjct: 82 GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG---KEAVVMFFKML 236
+ +LVD Y KC + + R F ++ +SW ++ + G+ A+V+F KML
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKML 201
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+ P N TF+ L G Q+HG ++K+ E D + +L MY +CG ++
Sbjct: 202 VLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMD 261
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ L + + S TS+++ YA +G EA +F +M L G+
Sbjct: 262 EITRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDM-----------LMGHM---- 305
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
IDQ + +L VC+ L ++++ KE+H + +N + + + NA
Sbjct: 306 ----------------PIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNA 349
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRP 475
++ +Y KCG++ S+ I F + + +D +SW A+LT Y + S+EA+ F EM +
Sbjct: 350 IVTVYGKCGDIASSEIVFNTL-ENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLES 408
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
S F ++L AC+ SSL G QIH V++ + + ALV +Y KC ++ A+++F
Sbjct: 409 SIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIF 468
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ +I N++I F + A+++F +M++E + PD TF G+L +C G V
Sbjct: 469 NSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVA 528
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
++F M+ KY + P++EHY CM+ L+ R G + F++ MP P + +
Sbjct: 529 EGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588
Query: 656 CRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
CR +G LG AA+++ E+ P P + I ++
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSPYIILSS 621
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 12/304 (3%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
GH+ P+ S L Q+C+S + +++ + + LLN + YGKCG
Sbjct: 303 GHM----PIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCG 358
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++ + +F+ + +D SW A+L Y QN L F +M G+ ++ +VLR
Sbjct: 359 DIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLR 418
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + L Q+H +VK G + +E++LV Y KC V+ A ++F+ ++N+ +S
Sbjct: 419 ACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIIS 478
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVI 270
WN ++ + GN A+ +F M E + P ++TF L +CS + EG + +
Sbjct: 479 WNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMK 538
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNIISWTSIVSGYAISGRI 326
K + E + +++ + GR DA +D QPD+ + W ++++ + G +
Sbjct: 539 TKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQ---LVWEALLASCRVHGNL 595
Query: 327 REAR 330
R
Sbjct: 596 DLGR 599
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 177/641 (27%), Positives = 309/641 (48%), Gaps = 39/641 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ L+ + LC + ++E + + LV T + + + YG G LD AR
Sbjct: 2 PLPPILHNFFYSLCDNINTLME---MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARL 58
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD +P D SW ++ Y N + + M + + +++VL++ +E
Sbjct: 59 VFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRN 118
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+++H IVK G + + + LVD Y KC + +R +FD+ ++N SW+ ++
Sbjct: 119 FDEGRKVHCQIVKFGNPDSFVF-TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAG 177
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ ++ +V+F +M E I T + AC L + ++G +HG +IK E
Sbjct: 178 YVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELG 237
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
++ +L ++Y KCG + DAR + D+ +I+SWT+++ GY +G EA +LF + +
Sbjct: 238 SYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQ 297
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V+ + VT+ + + C+ L + +G+ +
Sbjct: 298 VAVLP-------------------------------NDVTIASVFSSCSQLLNLNLGRSI 326
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG + S + V+N+L+D Y KC R AR F +S RD V+WN++++ +++ G
Sbjct: 327 HGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISD-RDVVAWNSIISAFSQNGS 384
Query: 459 SEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVI-RNCYEINVVCRG 516
+ EA+ F +M+ P T ++L+ACA++++L+ G H + + R NV
Sbjct: 385 AYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGT 444
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+ Y KC E A +F + ++MI G+ GR +L +FG M K +KP
Sbjct: 445 ALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKP 504
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+ F IL AC H G + + F + Y ++P +HY CM+ L R G +KE DF
Sbjct: 505 NEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDF 564
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ +MP P V + C + LGE A +R+ EL+P
Sbjct: 565 IQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHP 605
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 297/588 (50%), Gaps = 42/588 (7%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+D R LFD MP+R+ SWN + G Y + G P LELF+ M G +++ N+ +
Sbjct: 33 VDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPA 92
Query: 153 SAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ + + QL+GL+VK G + ++ + SS +D + + + ARR+FD KN
Sbjct: 93 AVAD-DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTE 151
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGV 269
WN ++ Y+ G EA+ +F K+L PL+ TF +AL A S G Q+HG
Sbjct: 152 VWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGY 211
Query: 270 IIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+IK V+LG +L MY +CG ++
Sbjct: 212 LIKGMHRTLPVILGNALVVMYSRCGN-------------------------------VQT 240
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +LF+ +PE+++++WN M+ + ++ E L V+ M+K+ D VTL +L+ +
Sbjct: 241 AFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSN 300
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWN 447
++++GK+ HG++ R+ S L+DMY K G + A R++ + +RD+V+WN
Sbjct: 301 TGDLQIGKQAHGYLIRHGIEGEGLESY-LIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWN 359
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS-LEQGKQIHCFVIR 505
A++ GY + GQ E+A+ F M + P+ T ++L AC + + GKQIHCF +R
Sbjct: 360 AMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVR 419
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
C + NV AL+++Y+KC + A VF + + +MI G + G++AL +
Sbjct: 420 RCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALAL 479
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M+++G+KPD +TF + AC + G V L + SM +GI +H+ C+ L
Sbjct: 480 FNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLA 538
Query: 626 RYGYMKELEDFVNRMPFNPT-VPMLRKIFDKCRKNGYATLGEWAARRL 672
+ G ++E +F+ + V + + C+ G L + ++L
Sbjct: 539 KAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKL 586
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 162/307 (52%), Gaps = 5/307 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLNRAIECYGKCGNLDDAR 97
P+ + + S+ + ++L L+ + T PV L N + Y +CGN+ A
Sbjct: 183 PLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAF 242
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFD +PE+D +WN M+ A+ QN F L L +M SG +A+ +T VL +S+
Sbjct: 243 DLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTG 302
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN--KNAVSWNVI 215
+L + KQ HG +++ G G LES L+D Y K + A+R+FD +N ++ V+WN +
Sbjct: 303 DLQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAM 361
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP-YEGMQIHGVIIKID 274
+ Y +G ++A+++F ML + P + T A+ L AC + Y G QIH ++
Sbjct: 362 IAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRC 421
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ + V +L +MY KCG + A + ++ +++T+++SG G ++A LFN
Sbjct: 422 LDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFN 481
Query: 335 EMPERNV 341
M E+ +
Sbjct: 482 SMQEKGL 488
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 216/431 (50%), Gaps = 41/431 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD-MN 135
+F+++ AI+ + + G++ AR +FD +++ WN M+ Y QNG ++LF +
Sbjct: 119 LFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILG 178
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN--VILESSLVDAYGKCMV 193
V + +T+ + L ++++ ++ + +QLHG ++K G VIL ++LV Y +C
Sbjct: 179 SREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGN 237
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A +FD + K+ V+WN +V ++ E +++ ++M + + T L A
Sbjct: 238 VQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSA 297
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD--QPDERNII 311
S G Q HG +I+ EG+ + L +MY K GR+E A+ + D + +R+ +
Sbjct: 298 SSNTGDLQIGKQAHGYLIRHGIEGEGLE-SYLIDMYAKSGRVEMAQRVFDSFKNAKRDEV 356
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W ++++GY SG+ PE+ ++ + AML +
Sbjct: 357 TWNAMIAGYTQSGQ-----------PEKAILVFRAML--------------------EAG 385
Query: 372 KDIDQVTLGLILNVCAGL-SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+ VTL +L C + + GK++H F R +N+FV AL+DMY KCG + +A
Sbjct: 386 LEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTA 445
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
F M+ + V++ +++G + G ++A+ F+ MQ + +P TF + ++AC
Sbjct: 446 ENVFGGMTG-KSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNY 504
Query: 490 ISSLEQGKQIH 500
+++G ++
Sbjct: 505 SGLVDEGLALY 515
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 182/347 (52%), Gaps = 25/347 (7%)
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR-----ELFNEMPERNVISWNAMLA 349
L AR L D RN S+++ YA S R REAR LF+ MP+RNV+SWN +
Sbjct: 2 LRRARSLPDTAVLRN-----SLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFG 56
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV--CAGLSEIKMGKEVHGFIHRN-- 405
Y ++ +EAL+ L + +D + T +N+ A + +++G + +
Sbjct: 57 WYVKTGRPQEALE---LFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPFQLYGLLVKYGV 113
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+Y +++FV ++ +DM+ + G+++SAR F + +++ +V WN ++TGY + GQ EA+
Sbjct: 114 EYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEV-WNTMITGYVQNGQFSEAIDL 172
Query: 466 FSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVCRGALVEVY 522
FS++ E TF + L A + + G+Q+H ++I+ + + V+ ALV +Y
Sbjct: 173 FSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMY 232
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
++C ++ A +F D++ N+M+ F N+ E L + M+K G D +T
Sbjct: 233 SRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLT 292
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQ-LEHYECMIKLYCRYG 628
+L A + G++++ Q + ++GI + LE Y +I +Y + G
Sbjct: 293 AVLSASSNTGDLQIGKQAHGYL-IRHGIEGEGLESY--LIDMYAKSG 336
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 182/669 (27%), Positives = 324/669 (48%), Gaps = 41/669 (6%)
Query: 27 TKTISGHLKSDEPVSYSLYAH----LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
KT + L+S + + L +H + + C + A+ + +++ +F N
Sbjct: 30 VKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNI 89
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
+ Y K G DA LFDEMPER+ S+ + Y G L+ ++ G N
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIG----LYSRLHREGHELN 145
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ + L+ + + LH IVK G+ N + ++L++AY C + AR +F+
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE 205
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I K+ V W IV Y+ G ++++ + M P N+TF AL A L +
Sbjct: 206 GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
+HG I+K + D V L ++Y + G + DA
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF----------------------- 302
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
++FNEMP+ +V+ W+ M+A + ++ EA+D MR+ ++ TL I
Sbjct: 303 --------KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
LN CA +G+++HG + + + +I+VSNAL+D+Y KC + +A F ++S + +
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-N 413
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
+VSWN V+ GY G+ +A + F E ++ + ++ TF + L ACA+++S++ G Q+H
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+ V +L+++Y KC +++A VF E ++DV N++I G+ + GR+
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL + +MK KP+ +TF G+L C + G + + F+SM +GI P LEHY CM+
Sbjct: 534 ALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
+L R G + + + +P+ P+V + R + +A + ++NP
Sbjct: 594 RLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEA 653
Query: 682 QFKITTNRF 690
+ + +N +
Sbjct: 654 TYVLVSNMY 662
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 240/532 (45%), Gaps = 57/532 (10%)
Query: 120 QNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
Q GF +T L L+ + S + + Y +LR ++ + +K +H I+K+G C ++
Sbjct: 25 QCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ L++AY K DA +FD++ +N VS+ + + Y ++ + ++ ++ RE
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHRE 140
Query: 239 --DIRPLNFTFANALFA-------CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
++ P FT LF C +L SP I+K+ ++ + V +L Y
Sbjct: 141 GHELNPHVFTSFLKLFVSLDKAEICPWLHSP---------IVKLGYDSNAFVGAALINAY 191
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
CG ++ AR + + ++I+ W IVS Y +G ++ +L + M +A
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM----------RMA 241
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
G+ + T L GL K VHG I + Y
Sbjct: 242 GFMP---------------------NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ V LL +Y + G++ A F +M + D V W+ ++ + + G EA+ F M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ P++FT ++L CA G+Q+H V++ +++++ AL++VY KC +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ A+++F E SS + + N++I+G+ + G +A +F + + +TF L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
++ L +Q + K ++ +I +Y + G +K + N M
Sbjct: 460 ASLASMDLGVQVH-GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 177/615 (28%), Positives = 299/615 (48%), Gaps = 38/615 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPE--RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
N + Y KC + AR +FD MP RD SW AM ++NG L LF + G
Sbjct: 88 NSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEG 147
Query: 139 VSANQITYANVLRSS-AEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTD 196
+ N T ++ A EL + GL+ K GF G +V + +L+D + K +
Sbjct: 148 LLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVA 207
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+FD + + V W +++ RY +G EAV +F ML +P +T ++ L AC+
Sbjct: 208 MRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTE 267
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G Q+H + +++ E D V L +MY K +
Sbjct: 268 LGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQS------------------- 308
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL-MRKTTKDID 375
+ ARE+FN MP+ NV++W A+L+GY + + +F M +
Sbjct: 309 ---------LHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPN 359
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T +L CA L + G+++H +++ + V NAL+ MY + G++ AR F
Sbjct: 360 HITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFD 419
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ 495
Q+ ++ + VS++ L G R ++ + + E S FTF +L++A A++ L +
Sbjct: 420 QLYEK-NMVSFSGNLDGDGRSNTYQD----YQIERMELGISTFTFGSLISAAASVGMLTK 474
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+++H ++ + + +LV +Y++C L A +VF E + +VI SMI G
Sbjct: 475 GQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK 534
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ ALE+F M G+KP+ +T+ +L AC H G VK + F M+ +G+IP++E
Sbjct: 535 HGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRME 594
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G +++ DF+N MP + + + C+ + +GE AA + +L
Sbjct: 595 HYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQL 654
Query: 676 NPWAPFQFKITTNRF 690
P P + + +N +
Sbjct: 655 EPQDPAPYVLLSNLY 669
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 326/636 (51%), Gaps = 45/636 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF C + A +KL + L+ F + + L + I Y G++ +R FD + +++
Sbjct: 28 LFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84
Query: 108 GGSWNAMLGAYTQNGFPGRTL----ELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
SWN+++ AY + G + +LF + + T+ +L++ ++ K
Sbjct: 85 IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H + K GF +V + +SLV Y + V+ A ++F D+ K+ SWN ++ + G
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
N A+ + +M E ++ T A+ L C+ G+ IH ++K + D V
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY K GRL+D A+ +F++M R+++S
Sbjct: 262 ALINMYSKFGRLQD-------------------------------AQMVFDQMEVRDLVS 290
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN+++A Y ++ AL F M+ D +T+ + ++ + LS+ ++ + + GF+
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 404 RNDY-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R ++ ++ + NAL++MY K G + A F Q+ R+D +SWN ++TGY + G + EA
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTGYTQNGLASEA 409
Query: 463 MTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ +++ M+ +T P++ T+ +++ A +++ +L+QG +IH +I+N ++V L++
Sbjct: 410 IDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLID 469
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC LE A+ +F E + N++I + RG EAL++F M E +K DHIT
Sbjct: 470 LYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHIT 529
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L AC H G V + FD M+ +YGI P L+HY CM+ L R GY+++ + V M
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM 589
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
P P + + C+ G A LG A+ RL E++
Sbjct: 590 PIQPDASIWGALLSACKIYGNAELGTLASDRLLEVD 625
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 8/331 (2%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + +CA S ++ + +++ VF+ N I Y K G L DA+ +FD+M
Sbjct: 226 ASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
RD SWN+++ AY QN P L F M G+ + +T ++ ++ + +S+ +
Sbjct: 286 RDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSI 345
Query: 166 HGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
G +++R + +V++ ++LV+ Y K M A +FD + K+ +SWN +V Y G
Sbjct: 346 LGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGL 405
Query: 225 GKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
EA+ + M+ E D P T+ + + A S + + +GM+IH +IK D V
Sbjct: 406 ASEAIDA-YNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA 464
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV- 341
L ++Y KCGRLEDA L + + W +I++ I GR EA +LF +M V
Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVK 524
Query: 342 ---ISWNAMLAGYTRSLLWKEALDFVFLMRK 369
I++ ++L+ + S L E +M+K
Sbjct: 525 ADHITFVSLLSACSHSGLVDEGQKCFDIMQK 555
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 289/537 (53%), Gaps = 43/537 (8%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+VL++ + + K++HG ++K+G +V + ++L+ YG+C + AR +FD + +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ VSW+ ++R KE F M E IR +NF MQ+
Sbjct: 159 DVVSWSTMIRSL---SRNKE-----FDMALELIREMNF------------------MQV- 191
Query: 268 GVIIKIDFEGDDVVLGSLTEMY-----VKCGRLEDARGLLDQPDER-NIISWTSIVSGYA 321
+V + S+ ++ ++ G+ A + + +E + + T+++ YA
Sbjct: 192 --------RPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYA 243
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
G + AR+LFN + ++ V+SW AM+AG RS +E M++ +++T+
Sbjct: 244 KCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLS 303
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
++ C +++GK++H +I RN +S ++ ++ AL+DMY KC ++R+AR F +Q R
Sbjct: 304 LIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALF-DSTQNR 362
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
D + W A+L+ YA+ ++A F +M+ RP+K T +LL+ CA +L+ GK +H
Sbjct: 363 DVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVH 422
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
++ + E++ + ALV++Y KC + A R+F E+ S D+ + N++I GF + G
Sbjct: 423 SYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE 482
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EAL++F M+++G+KP+ ITF G+L AC H G V + F+ M +G++PQ+EHY CM
Sbjct: 483 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCM 542
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G + E + + MP P + + CR + LGE AA +L E+ P
Sbjct: 543 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEP 599
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 218/426 (51%), Gaps = 35/426 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N + YG+C ++ AR +FD+M ERD SW+ M+ + ++N LEL +MN
Sbjct: 129 VFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNF 188
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN--VILESSLVDAYGKCMVM 194
V +++ +++ A+ + + K +H +++ + V ++L+D Y KC +
Sbjct: 189 MQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHL 248
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
AR++F+ + K VSW ++ + + +E +F +M E+I P T + + C
Sbjct: 249 GLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVEC 308
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
F + G Q+H I++ F + +L +MY KC + +AR L D R+++ WT
Sbjct: 309 GFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWT 368
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++S YA + I +A LF++M V R T
Sbjct: 369 AMLSAYAQANCIDQAFNLFDQMRTSGV--------------------------RPT---- 398
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+VT+ +L++CA + +GK VH +I + + ++ AL+DMY KCG++ +A F
Sbjct: 399 -KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+ + RD WNA++TG+A G EEA+ F+EM+ + +P+ TF LL AC++ +
Sbjct: 458 IE-AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLV 516
Query: 494 EQGKQI 499
+GK++
Sbjct: 517 TEGKKL 522
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 35/357 (9%)
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
NF + L AC +S G +IHG ++K + D V +L MY +C +E AR + D
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ER+++SW++++ + + A EL EM
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMN-------------------------- 187
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV--SNALLDMY 421
M+ ++ V++ +N+ A + ++MGK +H ++ RN + ++ V + ALLDMY
Sbjct: 188 --FMQVRPSEVAMVSM---VNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 242
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTF 480
KCG+L AR F ++Q + VSW A++ G R + EE F MQ E P++ T
Sbjct: 243 AKCGHLGLARQLFNGLTQ-KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITM 301
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+L+ C +L+ GKQ+H +++RN + +++ ALV++Y KC + A +F + +
Sbjct: 302 LSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQN 361
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
DV+I +M+ + +A +F M+ G++P +T +L C G + L
Sbjct: 362 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 418
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 181/392 (46%), Gaps = 45/392 (11%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C + A+ ++L + ++ + + L ++ YGKC ++ +AR LFD RD W
Sbjct: 308 CGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIW 367
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
AML AY Q + LF M SGV ++T ++L A L + K +H I K
Sbjct: 368 TAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 427
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+ IL ++LVD Y KC + A R+F + +++ WN I+ + + G G+EA+ +
Sbjct: 428 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDI 487
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-----IH--GVIIKIDFEGDDVVLGS 284
F +M R+ ++P + TF L ACS EG + +H G++ +I+ G
Sbjct: 488 FAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEH------YGC 541
Query: 285 LTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIR----EARELFNEMPER 339
+ ++ + G L++A ++ P + N I W ++V+ + + A +L PE
Sbjct: 542 MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPEN 601
Query: 340 NVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGL-------ILNVCAGLSE 391
+N +++ Y + W +A +RKT K T+G+ ++ V + E
Sbjct: 602 --CGYNVLMSNIYAAANRWSDAAG----VRKTMK-----TVGMKKEPGHSVIEVNGTVHE 650
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
MG + H I R ++ L +M RK
Sbjct: 651 FLMGDQSHPQIRR--------INEMLAEMRRK 674
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/616 (29%), Positives = 297/616 (48%), Gaps = 37/616 (6%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+ N I+ Y K G+LD A+ FD +D SWN M+ NG L F+ +
Sbjct: 84 IANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAH 143
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N + V+++ E HG I + GF + +++SL+ Y + M A
Sbjct: 144 FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAY 202
Query: 199 RMFDDIQNKN-AVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSF 256
++F ++ +N VSW+V++ ++ G ++ +MF M+ E I P T + L AC+
Sbjct: 203 KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTN 262
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G +HG++I E D V SL +MY KC
Sbjct: 263 LKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFN---------------------- 300
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ A + F E+PE+N+ISWN ML+ Y + EAL + M + + D+
Sbjct: 301 ---------VHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDE 351
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VTL +L + + + VHG I R Y SN + N+++D Y KC + AR+ F
Sbjct: 352 VTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQG 496
M+ ++D V+W+ ++ G+AR G+ +EA++ F +M E P+ + L+ ACA + L Q
Sbjct: 412 MN-KKDVVAWSTMIAGFARNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQS 470
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K H +R V +++++Y+KC +E +IR F + +V+ ++MI F N
Sbjct: 471 KWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRIN 530
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL +F +K+ G KP+ +T +L AC H G ++ L FF SM K+GI P LEH
Sbjct: 531 GLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEH 590
Query: 617 YECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
Y C++ + R G E + + ++P + + CR G +LG AA R+ +
Sbjct: 591 YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQ 650
Query: 675 LNPWAPFQFKITTNRF 690
L P + + + +N +
Sbjct: 651 LEPLSSAGYMLASNLY 666
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 159/291 (54%), Gaps = 5/291 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I+ Y KC N+ A F E+PE++ SWN ML AY N L L M
Sbjct: 285 LFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVR 344
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G +++T ANVL+ + L+ + +HG+I+++G+ N +L +S++DAY KC ++
Sbjct: 345 EGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVEL 404
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD + K+ V+W+ ++ + G EA+ + FK + E++ P N + N + AC+
Sbjct: 405 ARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISV-FKQMNEEVIPNNVSIMNLMEACAV 463
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ + HG+ ++ + + S+ +MY KCG +E + +Q ++N++ W+++
Sbjct: 464 SAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAM 523
Query: 317 VSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDF 363
+S + I+G EA LF ++ + N ++ ++L+ + L +E L F
Sbjct: 524 ISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSF 574
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 234/539 (43%), Gaps = 37/539 (6%)
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
L+L+ ++ SG + + + + +HG ++K+G + + +S +
Sbjct: 30 EALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTI 89
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
D Y K + A+R FD +NK++VSWNV+V G+ + F K +P
Sbjct: 90 DFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNIS 149
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
+ + A L +G HG I + F V SL +Y + + A L +
Sbjct: 150 SLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGEM 208
Query: 306 DERN-IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
RN ++SW+ ++ G+ G + +F RN+++
Sbjct: 209 SVRNDVVSWSVMIGGFVQIGEDEQGFLMF-----RNMVT--------------------- 242
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
+ D VT+ +L C L +I +G VHG + ++FV N+L+DMY KC
Sbjct: 243 ----EAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKC 298
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
N+ SA F ++ + ++ +SWN +L+ Y EA+ M E + T +
Sbjct: 299 FNVHSAFKAFKEIPE-KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANV 357
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L + + + +H +IR YE N + ++++ Y KC +E A VF + DV
Sbjct: 358 LQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDV 417
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ ++MI GF N + EA+ VF M +E I P++++ ++ AC ++ + ++
Sbjct: 418 VAWSTMIAGFARNGKPDEAISVFKQMNEEVI-PNNVSIMNLMEACAVSAELRQS-KWAHG 475
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
+ + G+ ++ +I +Y + G ++ N++P V + R NG A
Sbjct: 476 IAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMISAFRINGLA 533
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 193/664 (29%), Positives = 326/664 (49%), Gaps = 60/664 (9%)
Query: 81 NRAIECYGKC--GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
N I YG C G A+ +FD P RD +WNA++ Y + G T LF+DM
Sbjct: 205 NALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQRED 264
Query: 139 ----VSANQITYANVLRSSAEELELGVSKQLHGL---IVKRGFCGNVILESSLVDAYGKC 191
+ + T+ +++ +A L G S L + ++K G ++ + S+LV A+ +
Sbjct: 265 SRIQLRPTEHTFGSLI--TATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFARH 322
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
++ +A+ +F ++ KNAV+ N ++ LV + E V F R I T+ L
Sbjct: 323 GLIDEAKDIFLSLKEKNAVTLNGLIVG-LVKQHCSEEAVKIFVGTRNTIVVNADTYVVLL 381
Query: 252 FACSFLSSPYEGM----QIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPD 306
A + S P EG+ + HG +++ + + + L MY KCG ++ A + +
Sbjct: 382 SAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLME 441
Query: 307 ERNIISWTSIVSG-------------------------------------YAISGRIREA 329
+ ISW +I+S Y G + +
Sbjct: 442 ATDRISWNTIISALDQNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDC 501
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLL-WKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
++FN M + + +SWN+M+ S E ++ M + ++VT +L +
Sbjct: 502 WKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSP 561
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
LS +++GK+ H + ++ + V NAL+ Y K G++ S F MS RRD VSWN+
Sbjct: 562 LSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNS 621
Query: 449 VLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFVIRNC 507
+++GY G +EAM M + TF +L ACA++++LE+G ++H F IR+
Sbjct: 622 MISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSH 681
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E +VV ALV++Y+KC ++YA ++F + + NSMI G+ + GR+ALE F
Sbjct: 682 LESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFE 741
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M + PDH+TF +L AC H G V+ L++F+ M +GI+PQ+EHY C+I L R
Sbjct: 742 EMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRA 800
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT---LGEWAARRLNELNPWAPFQFK 684
G + ++++++ RMP P + R + CR++ + LG A R L E+ P P +
Sbjct: 801 GKIDKIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYV 860
Query: 685 ITTN 688
+ +N
Sbjct: 861 LASN 864
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 254/582 (43%), Gaps = 84/582 (14%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-- 134
+FL N + Y K L A +FDEMP+R+ SW +L Y G +F M
Sbjct: 95 LFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEAFRVFRAMLR 154
Query: 135 -NHSGVSANQITYANVLRSSAE--ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
G T+ +LR+ + LG + Q+HGL+ K + N + ++L+ YG C
Sbjct: 155 EVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGSC 214
Query: 192 MVMTD--ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNF 245
V A+R+FD ++ ++WN ++ Y G+ +F M RED +RP
Sbjct: 215 TVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEH 274
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
TF + + A S S G VL + +K G D
Sbjct: 275 TFGSLITATSLSS------------------GSSAVLDQVFVSVLKSGCSSD-------- 308
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+ +++VS +A G I EA+++F + E+N ++ N ++ G + +EA+ +F
Sbjct: 309 ----LYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVK-IF 363
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLS----EIKMGKEVHGFIHRNDYSS-NIFVSNALLDM 420
+ + T ++ T ++L+ A S ++ GKE HG + R + I VSN L++M
Sbjct: 364 VGTRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNM 423
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTF 480
Y KCG + SA F Q+ + D++SWN +++ + G
Sbjct: 424 YAKCGAIDSASKIF-QLMEATDRISWNTIISALDQNG----------------------- 459
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+ L G+Q+HC ++ +++ LV++Y +C + +VF +
Sbjct: 460 ---------LKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMAD 510
Query: 541 LDVIICNSMILGFCHNERG--REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
D + NSM +G + + E +EVF M + G+ P+ +TF +L A ++L
Sbjct: 511 HDEVSWNSM-MGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGK 569
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
QF ++ K+G++ +I Y + G M E + M
Sbjct: 570 QFHAAV-LKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNM 610
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 145/305 (47%), Gaps = 20/305 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N I CY K G+++ LF M RD SWN+M+ Y NG+ ++ M HSG
Sbjct: 588 NALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQ 647
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ T++ +L + A L ++H ++ +V++ES+LVD Y KC + A +
Sbjct: 648 IMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASK 707
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS- 258
+F+ + +N SWN ++ Y G G++A+ F +MLR P + TF + L ACS
Sbjct: 708 LFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGL 767
Query: 259 -----SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS 312
+E M HG++ +I+ + ++ + G+++ + + + P + N +
Sbjct: 768 VERGLEYFEMMPDHGILPQIEH------YSCVIDLLGRAGKIDKIKEYIQRMPMKPNALI 821
Query: 313 WTSIVSGYAIS---GRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
W +++ S +I REA + E+ +N +++ + + +W++
Sbjct: 822 WRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARAG 881
Query: 367 MRKTT 371
MR+ T
Sbjct: 882 MRQAT 886
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 13/231 (5%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S + + ++ + CAS A+ ++ + + + V + + ++ Y KCG +
Sbjct: 643 LHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRV 702
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR-- 151
D A LF+ M +R+ SWN+M+ Y ++G + LE F +M S S + +T+ +VL
Sbjct: 703 DYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSAC 762
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAV 210
S A +E G+ + ++ G + S ++D G+ + + + K NA+
Sbjct: 763 SHAGLVERGL--EYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNAL 820
Query: 211 SWNVIVR--RYLVAGN----GKEAVVMFFKMLREDIRPLNFTFANALFACS 255
W ++ R G+ G+EA+ + ++ E P+N+ A+ A +
Sbjct: 821 IWRTVLVACRQSKDGSKIELGREALRVLLEI--EPQNPVNYVLASNFHAAT 869
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 321/657 (48%), Gaps = 63/657 (9%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+L+A + A+S A V ++L+ FY + P LL A +FD+
Sbjct: 33 ALHAWALKSGAASHAPVA-----NSLINFYSSLPRPLLAAAF-------------AVFDD 74
Query: 103 MP--ERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELEL 159
+P RD SWN++L + + P L F M + S V + ++A ++A
Sbjct: 75 IPPAARDVTSWNSLLNPLSGH-RPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASA 133
Query: 160 GVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
H L K NV + +SL++ Y K +++DARR+FD + +N+ SW+ +V
Sbjct: 134 PAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAG 193
Query: 219 YLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---ID 274
Y +EA +F ML E F L A S G Q+HG+I+K +D
Sbjct: 194 YAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLD 253
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
F V SL MY K G + A + + ERN I+W+++++GYA +G A +F+
Sbjct: 254 FVS---VENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFS 310
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+M AG+T + +F F+ +LN + L + +
Sbjct: 311 QMHA----------AGFTPT-------EFTFVG--------------VLNASSDLGALAV 339
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK+ HG + + + I+V +AL+DMY KCG + A+ F Q+ + D V W A+++G+
Sbjct: 340 GKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE-VDIVLWTAMVSGHV 398
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G+ EEA+T ++ M E PSK T + L ACA I++LE GKQ+H +++ +
Sbjct: 399 QNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP 458
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL +Y+KC LE + VF+ DVI NS+I GF N G AL++F MK EG
Sbjct: 459 VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEG 518
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
PD+ITF IL AC H G V ++F M YG+ P+L+HY CM+ + R G +KE
Sbjct: 519 TIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA 578
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+DF+ + + + R + CR +G +A RL EL + + +N +
Sbjct: 579 KDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIY 635
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 195/735 (26%), Positives = 320/735 (43%), Gaps = 148/735 (20%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA--------------- 96
CAS ++I ARKL + L+ +FL N + Y CG + DA
Sbjct: 14 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 73
Query: 97 ----------------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
LF++MPERD SWN+M+ Y NG EL + SG
Sbjct: 74 NTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG------ELEATIKASG-- 125
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR- 199
+ Y L ++ QLHG K F + +E+S++D Y KC M A++
Sbjct: 126 --SLGY------------LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKV 171
Query: 200 ------------------------------MFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+F + ++ VSWN ++ G G E +
Sbjct: 172 FCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETL 231
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F +M + RP + T+A+ L AC+ + G +H I++++ D L +MY
Sbjct: 232 NTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMY 291
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCGRLE AR++F+ + E N +SW +++
Sbjct: 292 AKCGRLES-------------------------------ARQVFDGLTEHNAVSWTSLIG 320
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
G ++ +EAL MR+ DQ TL +L VC +I +G+++H S
Sbjct: 321 GVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDS 380
Query: 410 NIFVSNALLDMYRKCGNL-------------------------------RSARIWFYQMS 438
++ V+NAL+ MY KCG++ AR +F +M
Sbjct: 381 SVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMP 440
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+R + +SWN++L Y +RG EE + + +M E + TF T ++ACA+++ L G
Sbjct: 441 ER-NVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGN 499
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
QI + + NV ++V +Y++C +E A ++F +++ N+M+ G+ N
Sbjct: 500 QILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNG 559
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+GR+ +E+F M G PD I++ +L C H G V +F SM +GI P EH+
Sbjct: 560 QGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHF 619
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ L R G +++ ++ +N+MPF P + + CR +G L E A + L EL+
Sbjct: 620 VCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDA 679
Query: 678 WAPFQFKITTNRFDR 692
P + + N +
Sbjct: 680 EGPGSYCLLANIYSE 694
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 247/526 (46%), Gaps = 43/526 (8%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
++ A + ++++LH ++ G ++ L++ L++ Y C +++DA R+F I N
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT----FANALFACSFLSSPYEG-- 263
SWN ++ + +G +EA +F KM D N F N + +S G
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYL 130
Query: 264 ---MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+Q+HG K DF D V S+ +MY+KCG ++ A+ + + ++ W S++ GY
Sbjct: 131 KLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGY 190
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ G +++A ELF +MPER+ +SWN M++ ++ E L+ M + +T
Sbjct: 191 SKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYA 250
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L+ C + +++ G +H I R + +++ L+DMY KCG L SAR F +++
Sbjct: 251 SVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE- 309
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ VSW +++ G A+ G EEA+ F++M + +FT T+L C + + G+Q+
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF------ 553
H I + +V ALV +Y KC + A F+ D+I +MI F
Sbjct: 370 HAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDV 429
Query: 554 -----------------------CHNERG--REALEVFGLMKKEGIKPDHITFHGILLAC 588
+ +RG E L+V+ M +EG+K D ITF + AC
Sbjct: 430 EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISAC 489
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+ L Q K G + ++ +Y R G ++E +
Sbjct: 490 ADLAVLILGNQILAQAE-KLGFSSNVSVANSVVTMYSRCGQIEEAQ 534
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 192/434 (44%), Gaps = 60/434 (13%)
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
F ++ C+ L S ++H +I + + + L MY CG + DA +
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
N+ SW +++SG+A SG++REA +LF +MPER+ +SWN+M++GY
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGY--------------- 111
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
L + L +K+ ++HGF + D+ + V ++LDMY KCG
Sbjct: 112 -------FHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGA 164
Query: 427 LRSARIWF---------------YQMSQ---------------RRDKVSWNAVLTGYARR 456
+ A+ F Y S+ RD VSWN +++ ++
Sbjct: 165 MDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQH 224
Query: 457 GQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIR--NCYEINV 512
G E + +F EM W RP+ T+ ++L+AC +I LE G +H ++R C ++
Sbjct: 225 GFGAETLNTFLEM-WNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYA 283
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
C L+++Y KC LE A +VF + + + S+I G EAL +F M++
Sbjct: 284 GC--GLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV 341
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ D T +L C+ + ++ + Q + G+ + ++ +Y + G + +
Sbjct: 342 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITR-GLDSSVPVANALVTMYAKCGDVWK 400
Query: 633 LEDFVNRMPFNPTV 646
MP +
Sbjct: 401 ANHAFELMPIRDII 414
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/595 (26%), Positives = 291/595 (48%), Gaps = 38/595 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
YGKCG++ DA +F + + SW ++ A+ +NG L + M G+ + +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ + +L + LH +I++ R ++IL ++L+ Y +C + AR+ FD++
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR---EDIRPLNFTFANALFACSFLSSPYE 262
K V+WN ++ Y G+ + A+ ++ M+ E ++P TF++AL+AC+ + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G +I + + D +V +L MY KCG LE
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLE-------------------------- 215
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
AR++F+ + R+VI+WN M++GY + +AL+ M + VT +
Sbjct: 216 -----SARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN-LRSARIWFYQMSQRR 441
L C L +++ G+ +H + + Y S++ + N LL+MY KC + L AR F +M + R
Sbjct: 271 LTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERM-RTR 329
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
D ++WN ++ Y + GQ+++A+ F +MQ E P++ T +L+ACA + + QGK +H
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ + +VV +L+ +Y +C L+ + VF ++ +++I + + R
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
LE F + +EG+ D +T L AC H G +K +Q F SM +G+ P H+ CM
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCM 509
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ L R G ++ E+ ++ MPF P + C+ + A +L EL
Sbjct: 510 VDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 230/460 (50%), Gaps = 50/460 (10%)
Query: 51 LCASSK-----AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
+C+SSK ++ A LE+ L+ F + L I Y +C +L+ AR FDEM +
Sbjct: 67 VCSSSKDLKQGQLLHAMILETRLLEF----DIILGTALITMYARCRDLELARKTFDEMGK 122
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQITYANVLRSSAEELELGVS 162
+ +WNA++ Y++NG L+++ DM + G+ + IT+++ L + ++
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQG 182
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+++ V G+ + I++++L++ Y KC + AR++FD ++N++ ++WN ++ Y
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +A+ +F +M D +P TF L AC+ L +G IH + + +E D V+
Sbjct: 243 GAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIG 302
Query: 283 GSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L MY KC LE+AR + ++ R++I+W ++ Y G+ ++A ++F +M NV
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENV 362
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+++TL +L+ CA L + GK VH
Sbjct: 363 AP-------------------------------NEITLSNVLSACAVLGAKRQGKAVHAL 391
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK--VSWNAVLTGYARRGQS 459
I +++ + N+L++MY +CG+L F + RDK VSW+ ++ YA+ G S
Sbjct: 392 IASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI---RDKSLVSWSTLIAAYAQHGHS 448
Query: 460 EEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQ 498
+ F E+ E + T + L+AC++ L++G Q
Sbjct: 449 RTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 203/422 (48%), Gaps = 54/422 (12%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S +LYA C I + R++E+ V + N I Y KCG+L+ AR +F
Sbjct: 167 SSALYA-----CTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVF 221
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELE 158
D + RD +WN M+ Y + G + LELF M + N +T+ +L ++ E+LE
Sbjct: 222 DRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLE 281
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC-MVMTDARRMFDDIQNKNAVSWNVIVR 217
G + +H + + G+ ++++ + L++ Y KC + +AR++F+ ++ ++ ++WN+++
Sbjct: 282 QG--RAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIV 339
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ G K+A+ +F +M E++ P T +N L AC+ L + +G +H +I +
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ SL MY +CG L+D G+ +++++SW+++++ YA G R E F E+
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + + D VT+ L+ C+ +K G +
Sbjct: 460 QEGLAA-------------------------------DDVTMVSTLSACSHGGMLKEGVQ 488
Query: 398 V-------HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
HG DY + ++D+ + G L +A + M D V+W ++L
Sbjct: 489 TFLSMVGDHGLA--PDYRHFL----CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542
Query: 451 TG 452
+G
Sbjct: 543 SG 544
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 175/401 (43%), Gaps = 78/401 (19%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + DA + + N +SWT IV+ +A +G REA
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREA------------------ 42
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
GY R ++ + +R D + + VC+ ++K G+ +H I
Sbjct: 43 -LGYYRRMVLEG-------LRP-----DGAMFVVAIGVCSSSKDLKQGQLLHAMILETRL 89
Query: 408 SS-NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+I + AL+ MY +C +L AR F +M ++ V+WNA++ GY+R G A+ +
Sbjct: 90 LEFDIILGTALITMYARCRDLELARKTFDEMG-KKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 467 SEMQWET----RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+M ++ +P TF + L AC + + QG++I + + Y + + + AL+ +Y
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC LE A +VF + DVI N+MI G+ +ALE+F M KP+ +TF
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 583 GILLAC-----------IHE-------------GNVKL------------ALQFFDSMRC 606
G+L AC IH GNV L A Q F+ MR
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRT 328
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+ I + +I Y +YG K+ D +M P
Sbjct: 329 RDVIT-----WNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
>gi|302809936|ref|XP_002986660.1| hypothetical protein SELMODRAFT_124564 [Selaginella moellendorffii]
gi|300145548|gb|EFJ12223.1| hypothetical protein SELMODRAFT_124564 [Selaginella moellendorffii]
Length = 691
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 198/667 (29%), Positives = 314/667 (47%), Gaps = 31/667 (4%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+ +LY H C + +VE R + ++LV FL + I Y + G+L DAR L
Sbjct: 31 AITLYRHQLVNC---RRLVEGRSIHADLVRDGLDRDEFLASYVIHMYLRLGSLYDARQLL 87
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA---NQITYANVLRSSAEEL 157
+ D G W M+ A+ Q G L+LF M G + ++ ++ + + +E
Sbjct: 88 RQFDLDDTGLWTTMISAFAQRGQHREALDLFHAMQQCGDGSSRPDKTSFVVAISACSETR 147
Query: 158 ELGVSKQLHGLIVKRGFCG------NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+L K +H F G +V + S+LV+ Y KC + A R+F + K+ V+
Sbjct: 148 DLEQGKSIHA-----SFAGVNEIETDVAVASTLVNMYNKCGDLPQACRIFARMPEKSLVT 202
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN+++ Y+ G +++ + +M E IRP TF N+L CS L G IH
Sbjct: 203 WNIMIAAYIHHGFPTKSLQLLDQMQLEGIRPQKVTFINSLNGCSILGKLRPGKTIHSCAA 262
Query: 272 KIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ--PDERNIISWTSIVSGYAISGRIRE 328
+ DVVL + L MY KCG +++AR + D D +N ISW ++++GYA + R +
Sbjct: 263 EQRLIDRDVVLSTALITMYSKCGSVDEARKIFDSMAGDVKNTISWNAMLAGYAQNSRSSD 322
Query: 329 ARELFNEM------PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
A +LF M E +V+ W ML GY+ AL+ L R+ D +
Sbjct: 323 AIQLFRSMDLEAQCKEEDVVLWTTMLGGYSDRGDHAAALE---LFREMRIKPDAIAFVAA 379
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
++ CA I+ G+E+ I S+ V AL M+ + G L A F ++ + +
Sbjct: 380 IDACANAGSIRDGEEILARIRGCGCESDDRVGTALCYMFAQFGLLDRASQIFDRL-ESKS 438
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
+SWNA+L A +G + EAM F M E +RP + TF +L SSL +G+ +H
Sbjct: 439 AISWNAMLGAMAAQGLAIEAMELFRRMLGEGSRPDEITFAAMLDCFVGQSSLGEGRFVHG 498
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+ + + V AL+ +Y KC L +I +F S + I N++I N R E
Sbjct: 499 LIAESGRDRGVFLGTALLNMYGKCGSLADSIAIFANLSHRNTISWNALIAAHASNGRFLE 558
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
+L++F ++ EG + ITF ++ AC H G + M +GI+P EHY CMI
Sbjct: 559 SLDLFQELQNEGFLANTITFQSVIAACGHAGLADRGCDYMVLMIEDHGIVPLPEHYGCMI 618
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
L R G++ E ED V R P + CR +G G A+ L ++ P
Sbjct: 619 DLLGRAGWLGEAEDLVLRTPQEERAFNGMALLSSCRTHGDFERGRRVAQMLMKIAPGRTG 678
Query: 682 QFKITTN 688
+ + +N
Sbjct: 679 AYALLSN 685
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 298/642 (46%), Gaps = 32/642 (4%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S EP Y LF LC +A + + + T + L N + + G
Sbjct: 88 SPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWH 147
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F +MPERD SWN M+G Y + GF L+L+ M +G + T+ VLRS
Sbjct: 148 AWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGG 207
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+L + +++H +++ G V + ++LV Y KC + AR++FD + + +SWN +
Sbjct: 208 VPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAM 267
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + + + +F ML +++ P T + A LS +IH + +K F
Sbjct: 268 IAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGF 327
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D SL +MY GR+ EA +F+
Sbjct: 328 ATDVAFCNSLIQMYSSLGRM-------------------------------GEACTVFSR 356
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M R+ +SW AM++GY ++ +AL+ LM D VT+ L CA L + +G
Sbjct: 357 METRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVG 416
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H + I V+NAL++MY K + A I ++ +D +SW++++ G+
Sbjct: 417 IKLHELATSKGFIRYIVVANALVEMYAKSKIIEKA-IEVFKYMPDKDVISWSSMIAGFCF 475
Query: 456 RGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
++ EA+ F M + +P+ TF LAACA SL GK+IH V+R
Sbjct: 476 NHKNFEALYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVP 535
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC YA F + DV+ N M+ GF + G AL F M + G
Sbjct: 536 NALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEH 595
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF +L C G V + F SM KY I+P L+HY CM+ L R G + E +
Sbjct: 596 PDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYN 655
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F+NRMP P + + + CR + LGE AA+ + EL P
Sbjct: 656 FINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEP 697
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 303/616 (49%), Gaps = 32/616 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y G++ A LFD MP+ D SWNA++ Y Q G +++LF++M GVS
Sbjct: 87 NTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVS 146
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
++ T+A +L+S + EEL LGV Q+H L VK G +V S+LVD YGKC + DA
Sbjct: 147 PDRTTFAVLLKSCSALEELSLGV--QVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDAL 204
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F + +N VSW + + + +F +M R + ++A+A +C+ +S
Sbjct: 205 CFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMS 264
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR-GLLDQPDERNIISWTSIV 317
G Q+H IK F D VV ++ ++Y K L DAR P+ S +V
Sbjct: 265 CLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMV 324
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGY-----TRSLLWKEALDF--------- 363
+ I IR F+ + V S A GY L K LD
Sbjct: 325 GLFMIRSSIR-----FDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALME 379
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYR 422
+L+ + K D V+ I+ A L + G +H N+ + FV++ ++DMY
Sbjct: 380 AYLIFQGMKQKDSVSWNAII---AALEQ--NGHYDDTILHFNEMLRFDAFVASTVVDMYC 434
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFE 481
KCG + A+ ++ ++ VSWNA+L+G++ +SE A FSEM +P FTF
Sbjct: 435 KCGIIDEAQKLHDRIGGQQ-VVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFA 493
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
T+L CAN++++E GKQIH +I+ + LV++Y KC + ++ VF++
Sbjct: 494 TVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR 553
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
D + N+MI G+ + G EAL +F M+KE + P+H TF +L AC H G ++F
Sbjct: 554 DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYF 613
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY 661
M Y + PQLEH+ CM+ + R +E F+N MPF + + + C+
Sbjct: 614 HLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQD 673
Query: 662 ATLGEWAARRLNELNP 677
+ E AA + L+P
Sbjct: 674 VEIAELAASNVLLLDP 689
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 156/595 (26%), Positives = 257/595 (43%), Gaps = 146/595 (24%)
Query: 45 YAHLFQLCASS--KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
++ +FQ CA + +A+ R + +V P F+ N ++ Y +C AR +FD
Sbjct: 18 FSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDA 77
Query: 103 MPERDGGSWNAMLGAYTQNG--------FPG-----------------------RTLELF 131
MP RD SWN ML AY+ G F G +++LF
Sbjct: 78 MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 137
Query: 132 LDMNHSGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
++M GVS ++ T+A +L+S + EEL LGV Q+H L VK G +V S+LVD YG
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGV--QVHALAVKTGLEIDVRTGSALVDMYG 195
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + DA F + +N VSW + + + +F +M R + ++A+
Sbjct: 196 KCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYAS 255
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR----GLLDQP 305
A +C+ +S G Q+H IK F D VV ++ ++Y K L DAR GL +
Sbjct: 256 AFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHT 315
Query: 306 DER-----------------NIISWTSIVSG------------------------YAISG 324
E +++S + + S Y
Sbjct: 316 VETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCK 375
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRS-------LLWKEALDFVFLMRKTTKDI--- 374
+ EA +F M +++ +SWNA++A ++ L + E L F + T D+
Sbjct: 376 ALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCK 435
Query: 375 -------------------------------------------DQVTLGL---------I 382
+ + +GL +
Sbjct: 436 CGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATV 495
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ CA L+ I++GK++HG I + + + ++S+ L+DMY KCG++ + + F ++ ++RD
Sbjct: 496 LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV-EKRD 554
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
VSWNA++ GYA G EA+ F MQ E P+ TF +L AC+++ + G
Sbjct: 555 FVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 609
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 156/305 (51%), Gaps = 16/305 (5%)
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY +C AR + D R+ +SW ++++ Y+ +G I A LF+ MP+ +V+SW
Sbjct: 58 LLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSW 117
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA+++GY + +++E++D M + D+ T ++L C+ L E+ +G +VH +
Sbjct: 118 NALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVK 177
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
++ +AL+DMY KC +L A +FY M + R+ VSW + + G + Q +
Sbjct: 178 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE-RNWVSWGSAIAGCVQNEQYVRGLE 236
Query: 465 SFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F EMQ S+ ++ + +CA +S L G+Q+H I+N + + V A+V+VY
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K L A R F + V N+M++G M + I+ D ++ G
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGL--------------FMIRSSIRFDVVSLSG 342
Query: 584 ILLAC 588
+ AC
Sbjct: 343 VFSAC 347
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 208/546 (38%), Gaps = 131/546 (23%)
Query: 139 VSANQITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
V+ ++T++ V +S A+ E ++V GF + + L+ Y +C
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVS-GFVPTAFVSNCLLQMYARCAGAA 69
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGN------------------------------- 224
ARR+FD + ++ VSWN ++ Y AG+
Sbjct: 70 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGM 129
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E+V +F +M R + P TFA L +CS L G+Q+H + +K E D +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC L+DA ERN +SW S ++G + + ELF E
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIE--------- 240
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M++ + Q + CA +S + G+++H +
Sbjct: 241 ----------------------MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 278
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N +SS+ V A++D+Y K +L AR F+ + + S NA++ G
Sbjct: 279 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVG------------ 325
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-------- 516
++ R + + +ACA G+Q+HC I++ ++ C+
Sbjct: 326 -LFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIF 384
Query: 517 -------------------------------------------ALVEVYTKCCCLEYAIR 533
+V++Y KC ++ A +
Sbjct: 385 QGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQK 444
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+ V+ N+++ GF N+ A + F M G+KPDH TF +L C +
Sbjct: 445 LHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLAT 504
Query: 594 VKLALQ 599
++L Q
Sbjct: 505 IELGKQ 510
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ V ++ Y+ + A+ +F DV+ N+++ G+C +E++++F M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ G+ PD TF +L +C + L +Q ++ K G+ + ++ + YG
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVH-ALAVKTGLEIDVRTGSALVDM---YGKC 197
Query: 631 KELED---FVNRMP 641
+ L+D F MP
Sbjct: 198 RSLDDALCFFYGMP 211
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 277/547 (50%), Gaps = 64/547 (11%)
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ + ++F I+N N N +++ Y+ + +A+ ++ ML ++ N+T+ +
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS + ++G I ++K+ F+ D + +L MY CG L DAR + D +++SW
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSW 195
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVI------------------------------- 342
S+++GY + G + EA+++++ MPERNVI
Sbjct: 196 NSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLV 255
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SW+A+++ Y ++ +++EAL M +D+V + +L+ C+ L + GK VHG +
Sbjct: 256 SWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLV 315
Query: 403 HRNDYSSNIFVSNALLDMYR-------------------------------KCGNLRSAR 431
+ + + + NAL+ MY KCG + AR
Sbjct: 316 VKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKAR 375
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F M + D VSW+A+++GYA++ + E + F EMQ E T+P + ++++AC ++
Sbjct: 376 ALFDSMPDK-DNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHL 434
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++L+QGK IH ++ +N +IN++ L+ +Y K C+E A+ VFK V N++I
Sbjct: 435 AALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALI 494
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
LG N ++L+ F MK+ G+ P+ ITF +L AC H G V + F+SM ++ I
Sbjct: 495 LGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKI 554
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P ++HY CM+ L R G +KE E+ + MP P V + C+K G GE R
Sbjct: 555 GPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGR 614
Query: 671 RLNELNP 677
+L EL+P
Sbjct: 615 KLVELHP 621
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 278/582 (47%), Gaps = 47/582 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+S+ Y LFQ C+ A + + ++ +++ V++ N I Y CGNL
Sbjct: 118 LESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNL 177
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
DAR +FD D SWN+ML Y VL +
Sbjct: 178 SDARKVFDGSSVLDMVSWNSMLAGY------------------------------VLVGN 207
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
EE +K ++ + +R NVI +S++ +GK + +A ++F++++ K+ VSW+
Sbjct: 208 VEE-----AKDVYDRMPER----NVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWS 258
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y +EA+++F +M I + L ACS L G +HG+++K+
Sbjct: 259 ALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV 318
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
E + +L MY C + A+ L + + ISW S++SGY G I +AR LF
Sbjct: 319 GIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALF 378
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+ MP+++ +SW+AM++GY + + E L M+ D+ L +++ C L+ +
Sbjct: 379 DSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALD 438
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
GK +H +I +N NI + L++MY K G + A + ++ + + +WNA++ G
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA-LEVFKGLEEKGVSTWNALILGL 497
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG-KQIHCFVIRNCYEIN 511
A G ++++ +FSEM+ P++ TF +L AC ++ +++G + + + + N
Sbjct: 498 AMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPN 557
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+ G +V++ + L+ A + + + +LG C E E G
Sbjct: 558 IKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLV 617
Query: 572 EGIKPDHITFHGILLACIH--EGNVKLALQFFDSMRCKYGII 611
E + PDH F+ +LL+ I+ +GN L+ MR ++G++
Sbjct: 618 E-LHPDHDGFN-VLLSNIYASKGNWVDVLEVRGMMR-QHGVV 656
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/635 (29%), Positives = 324/635 (51%), Gaps = 47/635 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF C + + A++L + LV F+ R + Y G++ +RG FD++ +D
Sbjct: 82 LFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKD 138
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLH 166
+WN+M+ AY +NG ++ F + + A+ T+ VL++ ++ +++H
Sbjct: 139 VYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIH 195
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+ K GF +V + +SL+ Y + + AR +FDD+ ++ SWN ++ + GN
Sbjct: 196 CWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAA 255
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+A+ + +M E I + T A+ L C+ L IH +IK E + V +L
Sbjct: 256 QALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALI 315
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY K G L DA+ ++F +M R+V+SWN+
Sbjct: 316 NMYAKFGNLGDAQ-------------------------------KVFQQMFLRDVVSWNS 344
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
++A Y ++ A F F M+ + D +TL + ++ A + K + VHGFI R
Sbjct: 345 IIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRG 404
Query: 407 Y-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ + + NA++DMY K G + SA F + +D VSWN +++GY + G + EA+
Sbjct: 405 WLMEAVVIGNAVMDMYAKLGVIDSAHKVF-NLIPVKDVVSWNTLISGYTQNGLASEAIEV 463
Query: 466 FSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
+ M+ E + ++ T+ ++LAA A++ +L+QG +IH +I+ ++V L+++Y
Sbjct: 464 YRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYG 523
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCH--NERGREALEVFGLMKKEGIKPDHITF 581
KC L A+ +F + + N++I CH + G +AL++F M+ EG+KPDH+TF
Sbjct: 524 KCGRLVDAMCLFYQVPRESSVPWNAIIS--CHGIHGHGEKALKLFREMQDEGVKPDHVTF 581
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V FF M+ +YGI P L+HY CM+ L R G+++ DF+ MP
Sbjct: 582 ISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMP 640
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+P + + CR +G LG++A+ RL E++
Sbjct: 641 LHPDASIWGALLGACRIHGNIELGKFASDRLFEVD 675
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 282/548 (51%), Gaps = 41/548 (7%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
++++L S + L Q+H +V G + L + V+A + AR++FD+
Sbjct: 74 FSSLLDHSVHKRHL---NQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFP 130
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+ WN I+R Y +A+ M+ +M + P FT L ACS + G +
Sbjct: 131 EPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKR 190
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG I ++ FE D V L +Y KCGR+E AR + + D+RNI+SWTS++SGY +G
Sbjct: 191 VHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGL 250
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
EA +F +M +RNV D + L +L
Sbjct: 251 PMEALRIFGQMRQRNV-------------------------------KPDWIALVSVLRA 279
Query: 386 CAGLSEIKMGKEVHGFIHRN--DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
+ +++ GK +HG + + ++ ++ +S L MY KCG + AR +F QM + +
Sbjct: 280 YTDVEDLEQGKSIHGCVVKMGLEFEPDLLIS--LTAMYAKCGQVMVARSFFDQM-EIPNV 336
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
+ WNA+++GYA+ G + EA+ F EM R T + + ACA + SL+ K + +
Sbjct: 337 MMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDY 396
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+ + Y +V AL++++ KC ++ A VF + DV++ ++MI+G+ + RG++A
Sbjct: 397 INKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDA 456
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+++F MK+ G+ P+ +TF G+L AC H G V+ + F SM+ YGI + +HY C++
Sbjct: 457 IDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYACVVD 515
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
L R G++ E DF+ MP P V + + C+ + TLGE+AA +L L+P+
Sbjct: 516 LLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGH 575
Query: 683 FKITTNRF 690
+ +N +
Sbjct: 576 YVQLSNLY 583
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 220/423 (52%), Gaps = 33/423 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
FL+ + + G + AR +FDE PE WNA++ Y+ + F G +E++ M S
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV+ + T VL++ + L V K++HG I + GF +V +++ LV Y KC + A
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R +F+ + ++N VSW ++ Y G EA+ +F +M + +++P + L A + +
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+G IHG ++K+ E + +L SLT MY KCG++ AR DQ + N++ W +++
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMI 343
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGYA +G EA LF EM +N+ + D +
Sbjct: 344 SGYAKNGYTNEAVGLFQEMISKNIRT-------------------------------DSI 372
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ + CA + + + K + +I++ +Y +++FV+ AL+DM+ KCG++ AR F
Sbjct: 373 TVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVF-DR 431
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +D V W+A++ GY G+ ++A+ F M Q P+ TF LL AC + +E+G
Sbjct: 432 TLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEG 491
Query: 497 KQI 499
++
Sbjct: 492 WEL 494
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C+ + +++ + VF+ N + Y KCG ++ AR +F+ + +R+
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRN 234
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW +M+ Y QNG P L +F M V + I +VLR+ + +L K +HG
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+VK G L SL Y KC + AR FD ++ N + WN ++ Y G E
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNE 354
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
AV +F +M+ ++IR + T +A+ AC+ + S + I K ++ D V +L +
Sbjct: 355 AVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALID 414
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----IS 343
M+ KCG ++ AR + D+ +++++ W++++ GY + GR ++A +LF M + V ++
Sbjct: 415 MFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVT 474
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMR 368
+ +L S L +E + M+
Sbjct: 475 FVGLLTACNHSGLVEEGWELFHSMK 499
>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
Length = 699
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/649 (28%), Positives = 316/649 (48%), Gaps = 41/649 (6%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ES L+T + + N + YGKCG+L AR +FD M RD SWNA++ AY Q G
Sbjct: 37 IESGLLT-----QISVGNALVNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGH 91
Query: 124 PGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILE 181
+ELF M G + + +T+ V+ + + L + ++ L+ +RG +V+L
Sbjct: 92 CKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAANRIFALVEERGLLDSDVVLG 151
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED- 239
++LV+ Y KC + A +F+ ++ + V W ++ Y G + A+ +F +M +E+
Sbjct: 152 NALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMISVYAQDGYSEAALELFQQMEKEEA 211
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ P FT A+AL AC+ EG +IH ++I+ E + VV +L MY CG L+DA
Sbjct: 212 LLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDAL 271
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSL 355
+ +RN++SW ++++ Y +EA +F +M + N +++ L+ +
Sbjct: 272 ECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPA 331
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI--------KMGKE---------- 397
+++ L + K + +D + +L+ A L ++ +M K+
Sbjct: 332 AFEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAV 391
Query: 398 VHGFIHRNDY--------SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ G + ++ N+ N LL Y G L R F +M + RD ++WN +
Sbjct: 392 IEGSVRNGEFRNALELMPQKNLGSWNGLLGAYIHVGRLADTRKLFEEM-EERDVITWNMI 450
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
L Y R ++EA+ F M E T P+ T+ T+L ACA +SL +G+++H +
Sbjct: 451 LGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLGACAGEASLAEGRRVHELIAERGA 510
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ + ALV+++ KC L A + F+ + D N ++ N EAL+ F
Sbjct: 511 DSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNVLVAALAQNGDAEEALKQFLR 570
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M++EGIKP +TF + AC H G ++ A F S+R YGI P HY M L R G
Sbjct: 571 MQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAG 630
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++ E E+ + R+PF+ + C+ +G G A ++ NP
Sbjct: 631 FLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVERGRKVAGQVLRWNP 679
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 256/548 (46%), Gaps = 58/548 (10%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ + +++ L+S L K +H L+++ G + + ++LV+ YGKC + A
Sbjct: 5 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 64
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACS 255
R +FD + +++ +SWN ++ Y AG+ KEA+ + F+ ++ED I P + TF + AC
Sbjct: 65 REVFDGMDHRDVISWNAVITAYAQAGHCKEAMEL-FQAMQEDGRIEPDSVTFVAVVSACC 123
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDER-NIISW 313
S+ +I ++ + DVVLG +L MY KCG L+ A + ++ R +++ W
Sbjct: 124 DPSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLW 183
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T+++S YA G A ELF +M + A+L
Sbjct: 184 TTMISVYAQDGYSEAALELFQQMEKE-----EALLP------------------------ 214
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D TL L C G ++ G+E+H + S + V NAL+ MY CG L+ A
Sbjct: 215 -DGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALEC 273
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F +M+Q R+ VSWNA++ Y +EA F +MQ E +P+ TF T L+ C+ ++
Sbjct: 274 FQKMAQ-RNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAA 332
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK--ESSSLDVIICNSMI 550
E G V + ++ + AL+ Y K L+ RVF+ E DV+ N++I
Sbjct: 333 FEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVI 392
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G N R ALE LM ++ + +++G+L A IH G + + F+ M + I
Sbjct: 393 EGSVRNGEFRNALE---LMPQKNLG----SWNGLLGAYIHVGRLADTRKLFEEMEERDVI 445
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP---MLRKIFDKCRKNGYATLGEW 667
+ ++ Y KE RM T P + C G A+L E
Sbjct: 446 T-----WNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLGAC--AGEASLAE- 497
Query: 668 AARRLNEL 675
RR++EL
Sbjct: 498 -GRRVHEL 504
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 196/414 (47%), Gaps = 44/414 (10%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
ML + P N +F AL +C + S G IH ++I+ V +L MY KCG
Sbjct: 1 MLLHGLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGS 60
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L AR + D D R++ISW ++++ YA +G +EA ELF M E I
Sbjct: 61 LALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRI------------ 108
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFV 413
+ D VT +++ C S ++ + + R S++ +
Sbjct: 109 ------------------EPDSVTFVAVVSACCDPSALEAANRIFALVEERGLLDSDVVL 150
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
NAL++MY KCG+L+SA + F +M R D V W +++ YA+ G SE A+ F +M+ E
Sbjct: 151 GNALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMISVYAQDGYSEAALELFQQMEKEE 210
Query: 474 R--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P FT + LAAC LE+G++IH VI E +V ALV +Y C L+ A
Sbjct: 211 ALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDA 270
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ F++ + +V+ N+MI + H+ +EA +F M+ EG++P+ +TF L C
Sbjct: 271 LECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQPNSVTFVTFLSTC--- 327
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMI-----KLYCRYGYMKELEDFVNRM 640
F D + + ++E + ++ Y + G + E++ RM
Sbjct: 328 ---STPAAFEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQRM 378
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP S + + + CA ++ E R++ + +F+ N ++ +GKC +L AR
Sbjct: 476 EPNSIT-WTTMLGACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGAR 534
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
F+ + +D SWN ++ A QNG L+ FL M G+ +T+
Sbjct: 535 QAFERIRAKDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTF 583
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/643 (28%), Positives = 304/643 (47%), Gaps = 41/643 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L A + + C+ ++ +V ++ + +E Y CG LD A
Sbjct: 149 PNGFTL-ASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAET 207
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+ +PER SWNA+L Y ++G R + + + SG ++ T VL+ +E
Sbjct: 208 VLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCC---ME 264
Query: 159 LGVSK---QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LG++K +H ++KRG + +L S LV+ Y +C+ +A +F I + V + +
Sbjct: 265 LGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAM 324
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + EA+ +F KM ++P ++ F S +H I+K F
Sbjct: 325 ISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGF 384
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
V ++ MYVK G ++DA F+
Sbjct: 385 AMLKGVGDAILNMYVKVGAVQDAT-------------------------------VTFDL 413
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ E + SWN +L+ + ++ L M ++ T +L C L ++ G
Sbjct: 414 IHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFG 473
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+VH I ++ ++ VS L+DMY + G SA + F Q+ +R D SW +++GYA+
Sbjct: 474 TQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKER-DAFSWTVIMSGYAK 532
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
++E+ + F M E RPS T L+ C++++SL G Q+H + I++ + +VV
Sbjct: 533 TEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVV- 591
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
GALV++Y KC + A +F ES + D + N++I G+ + G +AL+ F M EG
Sbjct: 592 SGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGK 651
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+PD ITF G+L AC H G + ++F S+ YGI P +EHY CM+ + + G + E E
Sbjct: 652 RPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAE 711
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+N+MP P + R I CR + + E AA RL EL P
Sbjct: 712 SLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEP 754
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/588 (25%), Positives = 264/588 (44%), Gaps = 41/588 (6%)
Query: 14 SKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYP 73
++SSP ++ T + L+ L+A Q CA + + ++L + L+
Sbjct: 30 ARSSPSHANARLHTVAHAEELR--------LHAAALQDCAVRRTLRRGQELHARLLRSAL 81
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
P FLL+ + Y KCG L DAR +FD MP RD +W AM+ A+T G + L++F
Sbjct: 82 HPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFAR 141
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
MN G++ N T A+VL++ + + Q+HG +VK + + SSLV+AY C
Sbjct: 142 MNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGE 201
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A + + ++ VSWN ++ Y G+ + +++ K++ +T L
Sbjct: 202 LDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKC 261
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C L G +H +IK E D+V+ L EMY +C E
Sbjct: 262 CMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAE----------------- 304
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
EA E+F + E +V+ +AM++ + R + EALD M
Sbjct: 305 --------------EAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVK 350
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+ I V + + + + VH +I ++ ++ V +A+L+MY K G ++ A +
Sbjct: 351 PNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVT 410
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F + D SWN +L+ + E+ + F +M E +K+T+ ++L C ++ +
Sbjct: 411 F-DLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMN 469
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L G Q+H ++++ + + LV++Y + C A VF++ D ++ G
Sbjct: 470 LRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSG 529
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ E + +E F M +E I+P T L C ++ LQ
Sbjct: 530 YAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/616 (29%), Positives = 297/616 (48%), Gaps = 37/616 (6%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+ N I+ Y K G+LD A+ FD +D SWN M+ NG L F+ +
Sbjct: 84 IANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAH 143
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N + V+++ E HG I + GF + +++SL+ Y + M A
Sbjct: 144 FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAH 202
Query: 199 RMFDDIQNKN-AVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSF 256
++F ++ +N VSW+V++ ++ G ++ +MF M+ E I P T + L AC+
Sbjct: 203 KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTN 262
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G +HG++I E D V SL +MY KC
Sbjct: 263 LKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFN---------------------- 300
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ A + F E+PE+N+ISWN ML+ Y + EAL + M + + D+
Sbjct: 301 ---------VHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDE 351
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VTL +L + + + VHG I R Y SN + N+++D Y KC + AR+ F
Sbjct: 352 VTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQG 496
M+ ++D V+W+ ++ G+AR G+ +EA++ F +M E P+ + L+ ACA + L Q
Sbjct: 412 MN-KKDVVAWSTMIAGFARNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQS 470
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K H +R V +++++Y+KC +E +IR F + +V+ ++MI F N
Sbjct: 471 KWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRIN 530
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
EAL +F +K+ G KP+ +T +L AC H G ++ L FF SM K+GI P LEH
Sbjct: 531 GLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEH 590
Query: 617 YECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
Y C++ + R G E + + ++P + + CR G +LG AA R+ +
Sbjct: 591 YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQ 650
Query: 675 LNPWAPFQFKITTNRF 690
L P + + + +N +
Sbjct: 651 LEPLSSAGYMLASNLY 666
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 159/291 (54%), Gaps = 5/291 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I+ Y KC N+ A F E+PE++ SWN ML AY N L L M
Sbjct: 285 LFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVR 344
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G +++T ANVL+ + L+ + +HG+I+++G+ N +L +S++DAY KC ++
Sbjct: 345 EGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVEL 404
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD + K+ V+W+ ++ + G EA+ + FK + E++ P N + N + AC+
Sbjct: 405 ARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISV-FKQMNEEVIPNNVSIMNLMEACAV 463
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ + HG+ ++ + + S+ +MY KCG +E + +Q ++N++ W+++
Sbjct: 464 SAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAM 523
Query: 317 VSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDF 363
+S + I+G EA LF ++ + N ++ ++L+ + L +E L F
Sbjct: 524 ISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSF 574
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 235/539 (43%), Gaps = 37/539 (6%)
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
L+L+ ++ SG + + + + +HG ++K+G + + +S +
Sbjct: 30 EALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTI 89
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
D Y K + A+R FD +NK++VSWNV+V G+ + F K +P
Sbjct: 90 DFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNIS 149
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
+ + A L +G HG I + F V SL +Y + + A L +
Sbjct: 150 SLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGEM 208
Query: 306 DERN-IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
RN ++SW+ ++ G+ G + +F RN+++
Sbjct: 209 SVRNDVVSWSVMIGGFVQIGEDEQGFLMF-----RNMVT--------------------- 242
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
+ D VT+ +L C L +I +G VHG + ++FV N+L+DMY KC
Sbjct: 243 ----EAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKC 298
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
N+ SA F ++ + ++ +SWN +L+ Y EA+ M E + T +
Sbjct: 299 FNVHSAFKAFKEIPE-KNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANV 357
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L + + + +H +IR YE N + ++++ Y KC +E A VF + DV
Sbjct: 358 LQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDV 417
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ ++MI GF N + EA+ VF M +E I P++++ ++ AC ++ + ++
Sbjct: 418 VAWSTMIAGFARNGKPDEAISVFKQMNEEVI-PNNVSIMNLMEACAVSAELRQS-KWAHG 475
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
+ + G+ +++ +I +Y + G ++ N++P V + R NG A
Sbjct: 476 IAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMISAFRINGLA 533
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/556 (31%), Positives = 286/556 (51%), Gaps = 41/556 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + I Y KC L+ A+ +FD + ER+ WNAM+G Y QNG+ +EL +M
Sbjct: 220 VYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKS 279
Query: 137 SGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G ++ TY ++L + A E +E G +QLH +I+K F N+ + ++L+D Y K +
Sbjct: 280 CGFHPDEFTYTSILSACACLEHVEGG--RQLHSIIIKNKFASNLFVGNALIDMYAKSGFL 337
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
DAR+ F+ +++++ VSWN I+ Y+ + EA +MF KM I P + A+ L AC
Sbjct: 338 EDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSAC 397
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ + +G IH + +K E SL +MY KC
Sbjct: 398 ANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKC---------------------- 435
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
G + A+++ MPE +V+S NA++AGY L +EA+ M+ +
Sbjct: 436 ---------GDVGSAQKILKSMPEHSVVSINALIAGYAPVNL-EEAIILFEKMQAEGLNP 485
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++T +L+ C G ++ +G ++H I R + F+ +LL MY K ARI
Sbjct: 486 SEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARIL 545
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISS 492
F + S + + W A+++G A+ S+EA+ + EM+ P + TF ++L ACA +SS
Sbjct: 546 FSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSS 605
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMIL 551
+ G++IH + R +++ AL+++Y KC + +++VF++ S DVI NSMI+
Sbjct: 606 IGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIV 665
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
GF N AL +F MK+ + PD +TF G+L AC H G V Q FD M+ +
Sbjct: 666 GFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQIFD-MKPSFVTA 724
Query: 612 PQ-LEHYECMIKLYCR 626
P L E + K Y +
Sbjct: 725 PACLVREEVLTKAYAK 740
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/556 (27%), Positives = 253/556 (45%), Gaps = 69/556 (12%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA ++ R + N+V F + I+ Y K + D R +FD
Sbjct: 21 FAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDGGV 80
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
D SW +++ Y + G P LE+F M G +Q+ + V
Sbjct: 81 SLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTV--------------- 125
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
++AY + DA +F + N N V+WNV++ + G+
Sbjct: 126 --------------------INAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGH 165
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+++ +F M + I+ T + L A + L+ G+ +H IK + + V S
Sbjct: 166 ETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSS 225
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY KC LE A+++F+ + ERNV+ W
Sbjct: 226 LINMYAKCKELE-------------------------------AAKKVFDPIDERNVVLW 254
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NAM+ GY ++ E ++ + M+ D+ T IL+ CA L ++ G+++H I +
Sbjct: 255 NAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIK 314
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N ++SN+FV NAL+DMY K G L AR F ++ + RD VSWNA++ GY + EA
Sbjct: 315 NKFASNLFVGNALIDMYAKSGFLEDARKQF-ELMKSRDNVSWNAIIVGYVQEEDEVEAFL 373
Query: 465 SFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +M P + + ++L+ACAN+ EQGK IHC +++ E ++ +L+++Y
Sbjct: 374 MFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYA 433
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC + A ++ K V+ N++I G+ EA+ +F M+ EG+ P ITF
Sbjct: 434 KCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNL-EEAIILFEKMQAEGLNPSEITFAS 492
Query: 584 ILLACIHEGNVKLALQ 599
+L C + L +Q
Sbjct: 493 LLDGCGGPEQLILGIQ 508
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 224/458 (48%), Gaps = 35/458 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + CA + + R+L S ++ +F+ N I+ Y K G L+DAR F+ M
Sbjct: 289 YTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMK 348
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SWNA++ Y Q +F M+ G+ ++++ A++L + A K
Sbjct: 349 SRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKP 408
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L VK G ++ SSL+D Y KC + A+++ + + VS N ++ Y N
Sbjct: 409 IHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPV-N 467
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG- 283
+EA+++F KM E + P TFA+ L C G+QIH +I+K + DD LG
Sbjct: 468 LEEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGV 527
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL MYVK R DAR L + + ++ I WT+++SG A + EA + + EM N +
Sbjct: 528 SLLGMYVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNAL 587
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
DQ T +L CA LS I G+E+H I
Sbjct: 588 P-------------------------------DQATFVSVLRACAVLSSIGDGREIHSLI 616
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R + +AL+DMY KCG++RS+ F M + D +SWN+++ G+A+ G +E A
Sbjct: 617 FRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENA 676
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ F+EM Q P TF +L AC++ + +G+QI
Sbjct: 677 LRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI 714
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 218/443 (49%), Gaps = 38/443 (8%)
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P FTFA L C+ L S G +H ++K+ FE +G+L +MY K R+ D R +
Sbjct: 16 PNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRV 75
Query: 302 LDQPDERNIISWTSIVSGYAIS-----------------------------------GRI 326
D + +SWTS+++GY + GR+
Sbjct: 76 FDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALGRL 135
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+A LF +MP NV++WN M++G+ + ++++ MRK + TLG +L+
Sbjct: 136 DDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAI 195
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A L+++ G VH + SN++V ++L++MY KC L +A+ F + + R+ V W
Sbjct: 196 ASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDE-RNVVLW 254
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
NA++ GYA+ G + E + S M+ P +FT+ ++L+ACA + +E G+Q+H +I+
Sbjct: 255 NAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIK 314
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
N + N+ AL+++Y K LE A + F+ S D + N++I+G+ E EA +
Sbjct: 315 NKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLM 374
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M GI PD ++ IL AC + + + + K G+ L +I +Y
Sbjct: 375 FQKMHLVGILPDEVSLASILSACANVEGFEQG-KPIHCLSVKSGLETSLYAGSSLIDMYA 433
Query: 626 RYGYMKELEDFVNRMPFNPTVPM 648
+ G + + + MP + V +
Sbjct: 434 KCGDVGSAQKILKSMPEHSVVSI 456
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/607 (28%), Positives = 287/607 (47%), Gaps = 41/607 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y +CG +D A FD+ E WNA++ A G R +ELF M S
Sbjct: 192 VTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRS 251
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
A ++A L G+ Q+H I V++ ++L+ Y +C + +A R+F D
Sbjct: 252 CAIALGACAAAGHLRGGI--QIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFAD 309
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-- 261
+ ++N VSW ++ +G+ AV +F M+ E I P T+A+ + A + L
Sbjct: 310 MPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAIL 369
Query: 262 -EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ--PDERNIISWTSIVS 318
G +IH I + D +V SL MY + G L +AR + D + + ++S+T++++
Sbjct: 370 DRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIA 429
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
YA +G R+A E+F EM R V +++T
Sbjct: 430 AYAHNGHPRQALEIFREMTARGVAP-------------------------------NEIT 458
Query: 379 LGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+L C + ++ G +H I SS+ F N+L+DMY KCG+L A F M
Sbjct: 459 FATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +D V+W ++ + G + A+ + M Q P T TLL ACAN+ L G
Sbjct: 519 -KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMG 577
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
++IH +R+ E + + AL +Y KC LE A R+++ DV SM+
Sbjct: 578 EKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQ 637
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
ALE++ M+ EG++P+ +TF +L++C G V +FF S+ YG P EH
Sbjct: 638 GLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEH 697
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ CM+ + R G +++ E+ ++ MPF P + + C+ + A +G AA L EL+
Sbjct: 698 FGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELD 757
Query: 677 PWAPFQF 683
P + QF
Sbjct: 758 PESTSQF 764
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 160/607 (26%), Positives = 283/607 (46%), Gaps = 51/607 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
LYA+L + C + +A+ R++ +++V+ L + Y +C D A LFD M
Sbjct: 52 LYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAM 111
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+R WN ++ + P TLEL+ M+ + + + + +L +
Sbjct: 112 PDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGR 171
Query: 164 QLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+H + RG N ++S+LV Y +C + A FDD + WN I+ A
Sbjct: 172 SIHYRVATGRGI--NSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGA 229
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV-V 281
G+ + A+ +FF+M E + + + A AL AC+ G+QIH I+ + G V V
Sbjct: 230 GHHRRAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDK-IQSEIHGTRVLV 286
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
L +L MYV+CG+L++A R D P RN++SWTS+++ A SG A +LF+ M
Sbjct: 287 LNALISMYVRCGKLDEALRVFADMP-HRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEG 345
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE---IKMGKE 397
+ + ++ T +++ A L + G++
Sbjct: 346 I-------------------------------NPNEKTYASVVSAIAHLGRDAILDRGRK 374
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ-MSQRRDKVSWNAVLTGYARR 456
+H I + ++ V N+L++MY + G L AR F + + VS+ ++ YA
Sbjct: 375 IHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHN 434
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVC 514
G +A+ F EM P++ TF T+LAAC I L G IH +I + + +
Sbjct: 435 GHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFA 494
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+LV++Y KC L +A RVF+ + D++ ++I + R AL+++ M + GI
Sbjct: 495 YNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGI 554
Query: 575 KPDHITFHGILLACIHEGNVKLALQFF-DSMRCKYGIIPQLEHYE-CMIKLYCRYGYMKE 632
PD T +L+AC + G++ + + ++R K + Q H++ + +Y + G +++
Sbjct: 555 HPDIATLSTLLVACANLGDLAMGEKIHRQALRSK---LEQDAHFQNALAAMYAKCGSLEK 611
Query: 633 LEDFVNR 639
R
Sbjct: 612 ATRLYRR 618
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 213/429 (49%), Gaps = 39/429 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V +LN I Y +CG LD+A +F +MP R+ SW +M+ A Q+G ++LF M
Sbjct: 284 VLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIA 343
Query: 137 SGVSANQITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G++ N+ TYA+V+ + A + L +++H I G + I+++SL++ Y + +
Sbjct: 344 EGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGL 403
Query: 194 MTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ +AR +FD I +K VS+ ++ Y G+ ++A+ +F +M + P TFA L
Sbjct: 404 LAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVL 463
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDD-VVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
AC + G IH +I+ + D SL +MY KCG L A + + +++
Sbjct: 464 AACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDL 523
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
++WT+I++ SG R A +L++ M + +
Sbjct: 524 VAWTTIIAANVQSGNNRAALDLYDRMLQSGI----------------------------- 554
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D TL +L CA L ++ MG+++H R+ + NAL MY KCG+L A
Sbjct: 555 --HPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKA 612
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
Y+ + D +W ++L ++++G + A+ ++EM+ E RP++ TF +L +C+
Sbjct: 613 -TRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQ 671
Query: 490 ISSLEQGKQ 498
+ +G++
Sbjct: 672 AGLVAEGRE 680
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/600 (23%), Positives = 251/600 (41%), Gaps = 87/600 (14%)
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
L LD ++ + YAN+LR + L +++H IV R N +L + Y
Sbjct: 37 LRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYA 96
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
+C A +FD + ++ WNV+++ +L A ++ + ++ +M E+ +P F
Sbjct: 97 RCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMW 156
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
A+ AC + +G IH + + + +L MY +CGR++ A D E
Sbjct: 157 AIVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELG 215
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
W +I+S A +G R A ELF +M +
Sbjct: 216 TAPWNAIMSALAGAGHHRRAIELFFQMEQHQC---------------------------- 247
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ + L CA ++ G ++H I + + + V NAL+ MY +CG L
Sbjct: 248 -----SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDE 302
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A F M R+ VSW +++ A+ G A+ F M E P++ T+ ++++A A
Sbjct: 303 ALRVFADMPH-RNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIA 361
Query: 489 NISS---LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLDV 543
++ L++G++IH + + + + + + +L+ +Y + L A VF +S V
Sbjct: 362 HLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTV 421
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHE- 591
+ +MI + HN R+ALE+F M G+ P+ ITF +L AC IHE
Sbjct: 422 VSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHER 481
Query: 592 ------------------------GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
G++ A + F++M+ K L + +I +
Sbjct: 482 MIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTK-----DLVAWTTIIAANVQS 536
Query: 628 GYMKELEDFVNRM---PFNPTVPMLRKIFDKCRKNGYATLGEWAARRL--NELNPWAPFQ 682
G + D +RM +P + L + C G +GE R+ ++L A FQ
Sbjct: 537 GNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQ 596
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 12/270 (4%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
+S A + R +ES L + P F N ++ Y KCG+L A +F+ M +D +W
Sbjct: 473 ASGAWIHERMIESGLDSSDP----FAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTT 528
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ A Q+G L+L+ M SG+ + T + +L + A +L + +++H ++
Sbjct: 529 IIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSK 588
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+ +++L Y KC + A R++ + + +W ++ + G A+ ++
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYA 648
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M E +RP TF L +CS EG + H + + G + ++ +
Sbjct: 649 EMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRA 708
Query: 293 GRLEDARGLLDQ----PDERNIISWTSIVS 318
G+L DA LLD PDE I+W S++S
Sbjct: 709 GKLRDAEELLDSMPFYPDE---IAWQSLLS 735
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 58/129 (44%)
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
++A+ +++ + + LL C N +L+ G+++H ++ N + +
Sbjct: 33 DDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVF 92
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y +C C + AI +F N ++ F +R R+ LE++ M E +P
Sbjct: 93 QMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSAC 152
Query: 580 TFHGILLAC 588
F ++AC
Sbjct: 153 GFMWAIVAC 161
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 290/595 (48%), Gaps = 38/595 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
YGKCG++ DA +F + + SW ++ A+ +NG L + M G+ + +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ + +L + LH +I++ ++IL ++L+ Y +C + AR+ FD++
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR---EDIRPLNFTFANALFACSFLSSPYE 262
K V+WN ++ Y G+ + A+ ++ M+ E ++P TF++AL+ACS + +
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G +I + + D +V +L MY KCG LE
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLE-------------------------- 215
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
AR++F+ + R+VI+WN M++GY + +AL+ M + VT +
Sbjct: 216 -----SARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGL 270
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN-LRSARIWFYQMSQRR 441
L C L +++ G+ +H + + Y S++ + N LL+MY KC + L AR F ++ + R
Sbjct: 271 LTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERL-RTR 329
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
D ++WN ++ Y + GQ+++A+ F +MQ E P++ T +L+ACA + + QGK +H
Sbjct: 330 DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVH 389
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ + +VV +L+ +Y +C L+ + VF ++ +++I + + R
Sbjct: 390 ALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSR 449
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
LE F + +EG+ D +T L AC H G +K +Q F SM +G+ P H+ CM
Sbjct: 450 TGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCM 509
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ L R G ++ E+ ++ MPF P + C+ + A +L EL
Sbjct: 510 VDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 231/460 (50%), Gaps = 50/460 (10%)
Query: 51 LCASSK-----AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
+C+SSK ++ A LE+ L+ F + L I Y +C +L+ AR FDEM +
Sbjct: 67 VCSSSKDLKQGQLLHAMILETQLLEF----DIILGTALITMYARCRDLELARKTFDEMGK 122
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQITYANVLRSSAEELELGVS 162
+ +WNA++ Y++NG L+++ DM + G+ + IT+++ L + + ++
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQG 182
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+++ V G+ + I++++L++ Y KC + AR++FD ++N++ ++WN ++ Y
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +A+ +F +M D +P TF L AC+ L +G IH + + +E D V+
Sbjct: 243 GAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIG 302
Query: 283 GSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L MY KC LE+AR + ++ R++I+W ++ Y G+ ++A ++F +M NV
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENV 362
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+++TL +L+ CA L + GK VH
Sbjct: 363 AP-------------------------------NEITLSNVLSACAVLGAKRQGKAVHAL 391
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK--VSWNAVLTGYARRGQS 459
I +++ + N+L++MY +CG+L F + RDK VSW+ ++ YA+ G S
Sbjct: 392 IASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAI---RDKSLVSWSTLIAAYAQHGHS 448
Query: 460 EEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQ 498
+ F E+ E + T + L+AC++ L++G Q
Sbjct: 449 RTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ 488
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 204/422 (48%), Gaps = 54/422 (12%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S +LYA C+ I + R++E+ V + N I Y KCG+L+ AR +F
Sbjct: 167 SSALYA-----CSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVF 221
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELE 158
D + RD +WN M+ Y + G + LELF M + N +T+ +L ++ E+LE
Sbjct: 222 DRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLE 281
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC-MVMTDARRMFDDIQNKNAVSWNVIVR 217
G + +H + + G+ ++++ + L++ Y KC + +AR++F+ ++ ++ ++WN+++
Sbjct: 282 QG--RAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIV 339
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ G K+A+ +F +M E++ P T +N L AC+ L + +G +H +I +
Sbjct: 340 AYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKA 399
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ SL MY +CG L+D G+ +++++SW+++++ YA G R E F E+
Sbjct: 400 DVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELL 459
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ + + D VT+ L+ C+ +K G +
Sbjct: 460 QEGLAA-------------------------------DDVTMVSTLSACSHGGMLKEGVQ 488
Query: 398 V-------HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
HG DY + ++D+ + G L +A + M D V+W ++L
Sbjct: 489 SFLSMVGDHGLA--PDYRHFL----CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542
Query: 451 TG 452
+G
Sbjct: 543 SG 544
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 176/401 (43%), Gaps = 78/401 (19%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + DA + + N +SWT IV+ +A +G REA
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREA------------------ 42
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
GY R ++ + +R D + + VC+ ++K G+ +H I
Sbjct: 43 -LGYYRRMVLEG-------LRP-----DGAMFVVAIGVCSSSKDLKQGQLLHAMILETQL 89
Query: 408 SS-NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+I + AL+ MY +C +L AR F +M ++ V+WNA++ GY+R G A+ +
Sbjct: 90 LEFDIILGTALITMYARCRDLELARKTFDEMG-KKTLVTWNALIAGYSRNGDHRGALKIY 148
Query: 467 SEMQWET----RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+M ++ +P TF + L AC+ + + QG++I + + Y + + + AL+ +Y
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMY 208
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC LE A +VF + DVI N+MI G+ +ALE+F M KP+ +TF
Sbjct: 209 SKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFI 268
Query: 583 GILLAC-----------IHE-------------GNVKL------------ALQFFDSMRC 606
G+L AC IH GNV L A Q F+ +R
Sbjct: 269 GLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+ I + +I Y +YG K+ D +M P
Sbjct: 329 RDVIT-----WNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 287/544 (52%), Gaps = 36/544 (6%)
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+SG+ ++ YA+++ S+ + +L KQ+H ++ G + L + L+ A +
Sbjct: 14 TNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
T AR++FDD+ WN I+R Y + ++A++M+ M + P +FTF + L AC
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S LS G +H + ++ F+ D V L +Y KC RL AR
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR--------------- 174
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++ G +PER ++SW A+++ Y ++ EAL+ MRK
Sbjct: 175 TVFEGLP--------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D V L +LN L ++K G+ +H + + + +L MY KCG + +A+I F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M + + + WNA+++GYA+ G + EA+ F EM + RP + + ++ACA + SL
Sbjct: 281 DKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
EQ + ++ +V R+ Y +V AL++++ KC +E A VF + DV++ ++MI+G+
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R REA+ ++ M++ G+ P+ +TF G+L+AC H G V+ FF+ M + I PQ
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQ 458
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY C+I L R G++ + + + MP P V + + C+K+ + LGE+AA++L
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 674 ELNP 677
++P
Sbjct: 519 SIDP 522
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 234/459 (50%), Gaps = 38/459 (8%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S S YA L A+ KA + +++ + L+ FL+ + I G++ AR +F
Sbjct: 20 SDSFYASLID-SATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D++P WNA++ Y++N L ++ +M + VS + T+ ++L++ + L
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRR 218
+ + +H + + GF +V +++ L+ Y KC + AR +F+ + + VSW IV
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G EA+ +F +M + D++P + L A + L +G IH ++K+ E +
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+L SL MY KCG++ A+ L D+ N+I W +++SGYA +G REA ++F+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V D +++ ++ CA + ++ + +
Sbjct: 317 KDVRP-------------------------------DTISITSAISACAQVGSLEQARSM 345
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ ++ R+DY ++F+S+AL+DM+ KCG++ AR+ F + RD V W+A++ GY G+
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF-DRTLDRDVVVWSAMIVGYGLHGR 404
Query: 459 SEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+ EA++ + M+ P+ TF LL AC + + +G
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 157/305 (51%), Gaps = 3/305 (0%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++ + HL + C+ + R + + + VF+ N I Y KC L AR
Sbjct: 117 PDSFT-FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 99 LFD--EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ +PER SW A++ AY QNG P LE+F M V + + +VL +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+L + +H +VK G L SL Y KC + A+ +FD +++ N + WN ++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G +EA+ MF +M+ +D+RP + +A+ AC+ + S + ++ + + D+
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + +L +M+ KCG +E AR + D+ +R+++ W++++ GY + GR REA L+ M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 337 PERNV 341
V
Sbjct: 416 ERGGV 420
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y KCG + A+ LFD+M + WNAM+ Y +NG+ +++F +M + V + I+
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+ + + A+ L ++ ++ + + + +V + S+L+D + KC + AR +FD +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V W+ ++ Y + G +EA+ ++ M R + P + TF L AC+ EG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG 319
+ + ++ + G L+ A ++ P + + W +++S
Sbjct: 447 FNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 290/551 (52%), Gaps = 38/551 (6%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N+ T +L++ ++ ++ + +Q+HG ++K GF NV + +SL+ Y + +A ++F
Sbjct: 9 NEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVF 68
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ + K+ N ++ Y AG K A+ +F ++ + P ++TF N + C+
Sbjct: 69 NGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCNV----E 124
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
EG Q+HG+ +K G+L Q N ++++ Y
Sbjct: 125 EGKQLHGLAVK--------------------------YGVLLQTSVGN-----AVITMYG 153
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G + EA +F+ M ++N+ISW A+++GYTR+ ++A+D +R + D L
Sbjct: 154 KNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLAT 213
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
IL+ C+ + +G ++HG + + Y +I + AL+D+Y KC N +SAR F +S R
Sbjct: 214 ILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRS 273
Query: 442 DKVSWNAVLTGYARRGQSEE-AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
S+NA+L G+ +EE M S+++ +P +F LL+ AN +SL +G+ +
Sbjct: 274 -TASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGL 332
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H + I+ + ++ AL+ +Y KC +E A + F S+ D I N++I + + +G
Sbjct: 333 HAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQG 392
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
+AL ++ M+++G PD IT IL AC + G + L F++M KYGI P LEHY C
Sbjct: 393 EKALLLYQEMEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYAC 452
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
M+ L R GY+ + D +NR PF+ + + R + + C+ G LG+ A++ L +L+P
Sbjct: 453 MVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDE 512
Query: 680 PFQFKITTNRF 690
+ + +N +
Sbjct: 513 AGSYVLVSNIY 523
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 234/501 (46%), Gaps = 50/501 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ Q C+ +V ++ ++ VF+ I Y + GN D+A +F+ + +D
Sbjct: 16 ILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKD 75
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLH 166
N M+ Y + G+ R + +F+ + G+ N T+ N++ + + EE KQLH
Sbjct: 76 LRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCNVEE-----GKQLH 130
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
GL VK G + ++++ YGK ++ +A RMF + KN +SW ++ Y G G+
Sbjct: 131 GLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGE 190
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+AV F ++ + + A L CS + G QIHG++IK+ + D + +L
Sbjct: 191 KAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALI 250
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
++Y KC + AR +FN + R+ S+NA
Sbjct: 251 DLYAKCKNFQSAR-------------------------------TVFNGLSPRSTASFNA 279
Query: 347 MLAGYTRSLLWKE-ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+L G+ + +E + F+ +R D V+ +L++ A + + G+ +H + +
Sbjct: 280 ILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKT 339
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++ +I VSNAL+ MY KCG + A F MS D +SWNA+++ Y+ GQ E+A+
Sbjct: 340 GFAGHISVSNALITMYAKCGIVEDAYQAFNSMSA-NDCISWNAIISAYSLHGQGEKALLL 398
Query: 466 FSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEINVVCRGALVEVYT 523
+ EM+ + P + T +L AC E G +H F + + Y I L+E Y
Sbjct: 399 YQEMEEKGFTPDEITILVILQACTYSGLSEDG--LHLFNTMESKYGIQ-----PLLEHYA 451
Query: 524 KCCCLEYAIRVFKESSSLDVI 544
C ++ R S ++D+I
Sbjct: 452 --CMVDLLGRAGYLSQAMDII 470
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 218/464 (46%), Gaps = 19/464 (4%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+ F S+ + E ++L V + + N I YGK G +++A +F M ++
Sbjct: 112 YTFTNIISTCNVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKK 171
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+ SW A++ YT+NG+ + ++ FL++ GV + A +L +E L + Q+H
Sbjct: 172 NLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIH 231
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
GL++K G+ ++ + ++L+D Y KC AR +F+ + ++ S+N I+ ++ + +
Sbjct: 232 GLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNE 291
Query: 227 EAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
E ++F LR I+P + +F+ L + +S +G +H IK F G V +L
Sbjct: 292 EDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNAL 351
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NV 341
MY KCG +EDA + + ISW +I+S Y++ G+ +A L+ EM E+ +
Sbjct: 352 ITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDE 411
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
I+ +L T S L ++ L M +K Q L + L +
Sbjct: 412 ITILVILQACTYSGLSEDGLHLFNTME--SKYGIQPLLEHYACMVDLLGRAGYLSQAMDI 469
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQS 459
I+R+ +S + + L+++ + CG+L ++ + + + VL YA G
Sbjct: 470 INRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMI 529
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+EA S+++ + K + E A S +E +H FV
Sbjct: 530 DEA----SKVRTTMKDLKLSKE------AGSSWVEIDNMVHYFV 563
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/668 (27%), Positives = 302/668 (45%), Gaps = 99/668 (14%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPER--DGGSWNAMLGAYTQNGFPGRTLELF--- 131
+F N I + DA LFDEMP R D SW M+ Y+QNGF R+ E F
Sbjct: 74 IFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLM 133
Query: 132 -LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
D N G + + ++ +V+++ + ++ QLH L+ K GF +++S+V Y K
Sbjct: 134 IRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVK 193
Query: 191 CMVMTDARRMFDDIQ-------------------------------NKNAVSWNVIVRRY 219
C + A +F DI+ ++ VSWN ++ +
Sbjct: 194 CGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIF 253
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G G + + MF +M + P T+ + L AC+ S G +H I++++ D
Sbjct: 254 SQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDL 313
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V L +MY KCG L+ A+ +F + E
Sbjct: 314 VFGNGLIDMYAKCGCLD-------------------------------LAKRVFKSLREH 342
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ ISWN+++ G L ++AL MR+++ +D+ L IL VC+G G+ +H
Sbjct: 343 DHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLH 402
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGN------------LRSARIW-------------- 433
G+ ++ S+ V NA++ MY KCG+ LR+ W
Sbjct: 403 GYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIG 462
Query: 434 ----FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
++ M R+ V+WN++L+ Y + G SEE + + M+ +P TF T + ACA
Sbjct: 463 KARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACA 522
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+++ ++ G Q+ + +NV ++V +Y++C ++ A F D+I N+
Sbjct: 523 DLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNA 582
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
M+ F N G + ++ F M K KP+HI++ +L C H G V +FDSM +
Sbjct: 583 MLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVF 642
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
GI P EH+ CM+ L R G +++ +D + MPF P + + CR + L E A
Sbjct: 643 GISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETA 702
Query: 669 ARRLNELN 676
A++L EL+
Sbjct: 703 AKKLMELD 710
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 228/425 (53%), Gaps = 2/425 (0%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P +F N I Y + A +F+ MPERD SWN ++ ++Q+GF + L +F++M
Sbjct: 210 PSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEM 269
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ G S N +TY +VL + A +L LH I++ +++ + L+D Y KC +
Sbjct: 270 CNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCL 329
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
A+R+F ++ + +SWN ++ + G G++A+++F +M R + F L C
Sbjct: 330 DLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVC 389
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S G +HG IK V ++ MY KCG + A + RN ISWT
Sbjct: 390 SGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWT 449
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++++ ++ SG I +AR F+ MPERN+++WN+ML+ Y ++ +E L MR
Sbjct: 450 AMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQP 509
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D +T + CA L+ +K+G +V + S N+ V+N+++ MY +CG ++ A+ F
Sbjct: 510 DWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTF 569
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+ +D +SWNA+L +A+ G + + +F +M + E +P+ ++ ++L+ C+++ +
Sbjct: 570 DSIDD-KDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLV 628
Query: 494 EQGKQ 498
+GK
Sbjct: 629 AEGKH 633
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 238/499 (47%), Gaps = 44/499 (8%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
N+ ++++ A M+DA ++FD+ ++ K++VSW ++ Y G + F
Sbjct: 73 NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132
Query: 235 MLRE------DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
M+R+ + P F+F + + AC L +Q+H ++ K+ F + + S+ M
Sbjct: 133 MIRDTNDGGKNYDP--FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGM 190
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
YVKCG ++ A + + ++ W S++ GY+ +A ++FN MPER+ +SWN ++
Sbjct: 191 YVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLI 250
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
+ +++ + L M + +T G +L+ CA S++K G +H I R ++S
Sbjct: 251 SIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHS 310
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++ N L+DMY KCG L A+ F + + D +SWN+++TG G E+A+ F++
Sbjct: 311 LDLVFGNGLIDMYAKCGCLDLAKRVFKSL-REHDHISWNSLITGVVHFGLGEDALILFNQ 369
Query: 469 MQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M+ + +F T+L C+ G+ +H + I++ + A++ +Y KC
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGD 429
Query: 528 LEYA------------------IRVFKESSSL-------------DVIICNSMILGFCHN 556
+ A I F S + +++ NSM+ + N
Sbjct: 430 TDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQN 489
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
E L+++ M+ G++PD ITF + AC VKL +Q + K+G+ +
Sbjct: 490 GFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV-THATKFGLSLNVSV 548
Query: 617 YECMIKLYCRYGYMKELED 635
++ +Y R G +KE ++
Sbjct: 549 ANSIVTMYSRCGLIKEAKN 567
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 181/380 (47%), Gaps = 38/380 (10%)
Query: 247 FANALFACSFL-SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
F +A CSF SP+ ++H +I + +L +L MY CG DA + +
Sbjct: 10 FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDF 363
RNI +W +++ S R+ +A +LF+EMP R + +SW M++GY+++ + +
Sbjct: 70 HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129
Query: 364 VFLMRKTTKD----IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
LM + T D D + ++ C L + ++ ++H + + + + N+++
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189
Query: 420 MYRKCGNLRSARIWFYQMSQ------------------------------RRDKVSWNAV 449
MY KCG++ A F+ + + RD+VSWN +
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
++ +++ G + + F EM P+ T+ ++L+ACA+ S L+ G +H ++R +
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+++V L+++Y KC CL+ A RVFK D I NS+I G H G +AL +F
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369
Query: 569 MKKEGIKPDHITFHGILLAC 588
M++ + D IL C
Sbjct: 370 MRRSSVVLDEFILPTILGVC 389
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 153/345 (44%), Gaps = 35/345 (10%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
++ Y + CAS+ + L + ++ + + N I+ Y KCG LD A+ +F
Sbjct: 277 NFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVF 336
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+ E D SWN+++ G L LF M S V ++ +L +
Sbjct: 337 KSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAS 396
Query: 161 VSKQLHGLIVKRGF----------------CG---------------NVILESSLVDAYG 189
+ LHG +K G CG N I ++++ A+
Sbjct: 397 TGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFS 456
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
+ + AR FD + +N V+WN ++ Y+ G +E + ++ M ++P TF
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
++ AC+ L+ GMQ+ K + V S+ MY +CG +++A+ D D+++
Sbjct: 517 SIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKD 576
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAG 350
+ISW ++++ +A +G + + F +M + N IS+ ++L+G
Sbjct: 577 LISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSG 621
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA + ++ ++ F + V + N + Y +CG + +A+ FD + ++D SW
Sbjct: 521 CADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISW 580
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAML A+ QNG + ++ F DM + N I+Y +VL S + L + + +
Sbjct: 581 NAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVL-SGCSHMGLVAEGKHYFDSMT 639
Query: 172 RGFCGNVILE--SSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEA 228
R F + E S +VD G+ ++ A+ + + + K NA W+ ++ V + + A
Sbjct: 640 RVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLA 699
Query: 229 VVMFFKMLREDI 240
K++ D+
Sbjct: 700 ETAAKKLMELDV 711
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/614 (27%), Positives = 295/614 (48%), Gaps = 100/614 (16%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
++ +L A + ++H I+K F +++ L+D YGKC + AR++FD +
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN--------------------- 244
+N SWN I+ + +G +AV +F KM + D N
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 245 ----------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
++F +AL AC+ L G QIH ++ + ++ D + +L +MY KCGR
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+ A+ +F+EM R+ +SWN+++ Y ++
Sbjct: 202 -------------------------------VEYAQSVFDEMTVRSRVSWNSLITCYEQN 230
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFV 413
EAL M K + D+VTL +++ CA +S IK G+++H + + D + +++ +
Sbjct: 231 GPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLIL 290
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQR------------------------------RDK 443
NALLDMY KC + ARI F M R +D
Sbjct: 291 GNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDV 350
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCF 502
++WNA++ G + G++EEA+ F ++ E+ P+ +TF LL ACAN++ L+ G+Q H
Sbjct: 351 ITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSH 410
Query: 503 VIRNCYEI------NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
V+++ + +V +L+++Y KC +E RVF+ D + N+MI+G+ N
Sbjct: 411 VLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQN 470
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G +ALEVF M + G PDH+T G+L AC H G + +F SM ++G++P +H
Sbjct: 471 GFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDH 530
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ L R GY++E ++ + M P + + C+ + LGE+ ++L E++
Sbjct: 531 YTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVD 590
Query: 677 PWAPFQFKITTNRF 690
P + + +N +
Sbjct: 591 PENSGPYVLLSNMY 604
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/605 (29%), Positives = 313/605 (51%), Gaps = 74/605 (12%)
Query: 33 HLKSDEP-VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
HLK D + S ++ L CA S++ + ++ + ++ F+ NR I+ YGKCG
Sbjct: 9 HLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCG 68
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGF---------------------------- 123
+D AR LFD M ER+ SWN+++ A+T++GF
Sbjct: 69 CVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQ 128
Query: 124 PGR---TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
GR L F M+ G N+ ++ + L + A +L + Q+H L+ + + +V +
Sbjct: 129 HGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYM 188
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
S+LVD Y KC + A+ +FD++ ++ VSWN ++ Y G EA+ +F +M++ +
Sbjct: 189 GSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGV 248
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDAR 299
P T A+ + AC+ +S+ EG QIH ++K D +D++LG +L +MY KC R+ +AR
Sbjct: 249 EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEAR 308
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D R+++S TS+VSGYA + +++ AR +F+ M ++VI+WNA++AG T++ +E
Sbjct: 309 IIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEE 368
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY------SSNIFV 413
AL L+++ + T G +LN CA L+++++G++ H + ++ + S++FV
Sbjct: 369 ALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFV 428
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWE 472
N+L+DMY KCG++ + F M + +D VSWNA++ GYA+ G +A+ F +M +
Sbjct: 429 GNSLIDMYMKCGSVENGCRVFQHMLE-KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESG 487
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P T +L AC++ L++G+ Y + ++ +
Sbjct: 488 EAPDHVTMIGVLCACSHAGLLDEGR-----------------------YYFRSMTAQHGL 524
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
K D C +LG R E L+++ ++PD I + +L AC
Sbjct: 525 MPLK-----DHYTCMVDLLG-----RAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHR 574
Query: 593 NVKLA 597
N++L
Sbjct: 575 NIQLG 579
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 222/413 (53%), Gaps = 41/413 (9%)
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFT-FANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+AGNG K L+ D+ L+ + F+ L C+ S + ++H IIK F +
Sbjct: 1 MAGNG------LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASET 54
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+ L ++Y KCG ++ AR L D+ ERNI SW SI+ + SG + +A +F +MP+
Sbjct: 55 FIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQV 114
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ SWN+M++G+ + + EAL + M +++ + G L+ CAGL ++K+G ++H
Sbjct: 115 DQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIH 174
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
++R++Y S++++ +AL+DMY KCG + A+ F +M+ R +VSWN+++T Y + G
Sbjct: 175 SLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTV-RSRVSWNSLITCYEQNGPV 233
Query: 460 EEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR------------- 505
+EA+ F EM + P + T ++++ACA IS++++G+QIH V++
Sbjct: 234 DEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNA 293
Query: 506 ------NCYEIN-------------VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C IN VV ++V Y K ++ A +F DVI
Sbjct: 294 LLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITW 353
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
N++I G N EAL +F L+K+E + P H TF +L AC + +++L Q
Sbjct: 354 NALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQ 406
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 280/534 (52%), Gaps = 17/534 (3%)
Query: 25 TLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAI--VEARKLESNLVTFYPTPPVFLLNR 82
T S LKS P ++ L + L + C S + V + ++ L PV L NR
Sbjct: 2 TTIAATSSALKSFSPPTHPLIS-LLETCESMDQLQQVHCQAIKKGL----NANPV-LQNR 55
Query: 83 AIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+ C + G+ AR LFDE+PE + WN M+ Y++ FP + L+L+M GV
Sbjct: 56 VMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVK 115
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ T+ + + ++ L +QLHG ++K G NV + ++LV Y C + AR +
Sbjct: 116 PDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGV 175
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++WN+I+ Y G +E+ +F M + + P T L ACS L
Sbjct: 176 FDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDL 235
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G ++H + E + V+ ++ +MY CG ++ A G+ + R+IISWT+IVSG+
Sbjct: 236 RTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGF 295
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G I AR F++MPE++ +SW AM+ GY RS +KEAL+ M+ T D+ T+
Sbjct: 296 TNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMV 355
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L CA L +++G+ + +I RN +++FV NAL+DMY KCG++ A F +MSQ
Sbjct: 356 SVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ- 414
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
RDK +W A++ G A G E+A+ FS M + P + T+ +L+AC + +++G++
Sbjct: 415 RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKY 474
Query: 500 HC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++ E N+ G LV++ + L+ A V + I NS++ G
Sbjct: 475 FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMP----IKANSIVWG 524
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 264/551 (47%), Gaps = 70/551 (12%)
Query: 163 KQLHGLIVKRGFCGNVILESSLV-----DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+Q+H +K+G N +L++ ++ YG ARR+FD+I N WN ++R
Sbjct: 35 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD---FQYARRLFDEIPEPNLFIWNTMIR 91
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y + V ++ +MLR ++P +TF + + G Q+HG ++K
Sbjct: 92 GYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLK----- 146
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
GL + N+ T++V Y + G++ AR +F+ P
Sbjct: 147 ---------------------HGL-----QYNVFVHTALVQMYLLCGQLDTARGVFDVCP 180
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ +VI+WN +++ Y + ++E+ +M VTL L+L+ C+ L +++ GK+
Sbjct: 181 KADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK 240
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------- 440
VH ++ SN+ + NA++DMY CG + SA F M+ R
Sbjct: 241 VHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE 300
Query: 441 -------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAA 486
+D VSW A++ GY R + +EA+ F MQ +P +FT ++L A
Sbjct: 301 IDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTA 360
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA++ +LE G+ I ++ RN + ++ R AL+++Y KC ++ A +F+E S D
Sbjct: 361 CAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTW 420
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
+MI+G N G +AL++F M K I PD IT+ G+L AC H G V ++F M
Sbjct: 421 TAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTS 480
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
++GI P + HY C++ L R G +KE + + MP + + CR + + E
Sbjct: 481 QHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAE 540
Query: 667 WAARRLNELNP 677
+++ EL P
Sbjct: 541 MVVKQILELEP 551
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 119/253 (47%), Gaps = 10/253 (3%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM--YRKCGNLRSARIWFYQMSQ 439
+L C + +++ +VH + ++N + N ++ + G+ + AR F ++ +
Sbjct: 24 LLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ WN ++ GY+R + ++ + EM + +P ++TF L +LE G+Q
Sbjct: 81 P-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 139
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H V+++ + NV ALV++Y C L+ A VF DVI N +I + +
Sbjct: 140 LHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGK 199
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR-CKYGIIPQLEHY 617
E+ +F +M+ + + P +T +L AC +++ + ++ CK LE+
Sbjct: 200 FEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN- 258
Query: 618 ECMIKLYCRYGYM 630
MI +Y G M
Sbjct: 259 -AMIDMYADCGEM 270
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 282/534 (52%), Gaps = 41/534 (7%)
Query: 163 KQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTD----ARRMFDDIQNKNAVSWNVIVR 217
+Q+H ++K R +I E+ L A +++ D A +F+ I + ++NV++R
Sbjct: 38 QQVHAHLLKTRRLLDPIITEAVLESA---ALLLPDTIDYALSIFNHIDKPESSAYNVMIR 94
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ A+++F KM + ++ FTF++ L ACS + + EG Q+H +I+K F+
Sbjct: 95 GLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKS 154
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
++ V +L +MY CG+ I AR +F+ MP
Sbjct: 155 NEFVENTLIQMYANCGQ-------------------------------IGVARHVFDGMP 183
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
ER++++WN+ML+GYT++ LW E + + + + D VT+ +L C L+ +++G+
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGEL 243
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+ +I N ++ +L+DMY KCG + +AR F +M +RD V+W+A+++GYA+
Sbjct: 244 IGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISGYAQAD 302
Query: 458 QSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ +EA+ F EMQ P++ T ++L +CA + + E GK +H ++ + ++ V
Sbjct: 303 RCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L++ Y KC ++ ++ VFKE S +V ++I G +N G+ ALE F M + +KP
Sbjct: 363 QLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKP 422
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+ +TF G+L AC H V F+SMR + I P++EHY CM+ + R G+++E F
Sbjct: 423 NDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQF 482
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
++ MPF P + R + CR + + E + + L P + + +N +
Sbjct: 483 IDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTY 536
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 222/442 (50%), Gaps = 34/442 (7%)
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+D A +F+ + + + ++N M+ P L LF M+ V ++ T+++VL+
Sbjct: 70 TIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLK 129
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + L +Q+H LI+K GF N +E++L+ Y C + AR +FD + ++ V+
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ Y G E V +F K+L I + T + L AC L++ G I I+
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV 249
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
++ + SL +MY KCG+++ AR L D+ D+R++++W++++SGYA + R +EA
Sbjct: 250 SKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALN 309
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF+EM + NV ++VT+ +L CA L
Sbjct: 310 LFHEMQKGNVYP-------------------------------NEVTMVSVLYSCAMLGA 338
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ GK VH +I + + + L+D Y KCG + + F +MS ++ +W A++
Sbjct: 339 YETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS-FKNVFTWTALIQ 397
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-YE 509
G A G+ + A+ FS M + + +P+ TF +L+AC++ ++QG+ + + R+ E
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIE 457
Query: 510 INVVCRGALVEVYTKCCCLEYA 531
+ G +V++ + LE A
Sbjct: 458 PRIEHYGCMVDILGRAGFLEEA 479
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 217/455 (47%), Gaps = 17/455 (3%)
Query: 19 KPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVF 78
K +P L H KS + ++ ++ + + C+ KA+ E ++ + ++ F
Sbjct: 99 KRSPDNALLLFKKMHEKSVQHDKFT-FSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+ N I+ Y CG + AR +FD MPER +WN+ML YT+NG ++LF +
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + +T +VL + L + + + IV +G N L +SL+D Y KC + AR
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++FD++ ++ V+W+ ++ Y A KEA+ +F +M + ++ P T + L++C+ L
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G +H I K + + L + Y KCG ++ + + + +N+ +WT+++
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397
Query: 319 GYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
G A +G + A E F+ M E +V +++ +L+ + + L + MR+ DI
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDF-DI 456
Query: 375 DQVT--LGLILNVC--AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+ G ++++ AG E E + FI + N V LL R N+ A
Sbjct: 457 EPRIEHYGCMVDILGRAGFLE-----EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMA 511
Query: 431 RIWFYQMSQRRDKVSWNAVLTG--YARRGQSEEAM 463
+++ S + +L YA G+ E+A+
Sbjct: 512 EKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAI 546
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 272/521 (52%), Gaps = 37/521 (7%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+I + L+D Y KC A ++FD + +N VSW ++ +++ G+ ++ +F +M
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
R+ I P FTF+ L AC L++ +G+QIHG +KI FE V SL +MY KCGR
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR-- 520
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
I EA ++F M R++ISWNAM+AGY +
Sbjct: 521 -----------------------------INEAEKVFRWMVGRSLISWNAMIAGYVHAGY 551
Query: 357 WKEALDFVFLMR--KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY--SSNIF 412
AL +M+ K + D+ TL +L C+ I GK++HGF+ R+ + S+
Sbjct: 552 GSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 611
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-W 471
++ +L+D+Y KCGNL SAR F Q+ ++ +SW++++ GYA+ G EAM F +Q
Sbjct: 612 ITGSLVDLYVKCGNLFSARKAFDQIKEKT-MISWSSLILGYAQEGDFVEAMGLFKRLQEL 670
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
++ F +++ A+ + L+QGKQ+ V++ + +LV++Y KC ++ A
Sbjct: 671 SSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEA 730
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ F E DVI MI G+ + G++A+ +F M + I+PD + + +L AC H
Sbjct: 731 EKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHS 790
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G +K + F + GI P++EHY C++ L R G +KE + V+ MP P V + +
Sbjct: 791 GMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQT 850
Query: 652 IFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
+ CR +G LG+ + L ++ P + + +N + +
Sbjct: 851 LLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQ 891
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 215/426 (50%), Gaps = 41/426 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KC A +FD MPER+ SW A++ + NG +L LF +M G+
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIY 467
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N+ T++ L++ LE G+ Q+HG +K GF V + +SLVD Y KC + +A
Sbjct: 468 PNEFTFSTNLKACGLLNALEKGL--QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 525
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI--RPLNFTFANALFACSF 256
++F + ++ +SWN ++ Y+ AG G A+ F M I RP FT + L ACS
Sbjct: 526 KVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSS 585
Query: 257 LSSPYEGMQIHGVIIKIDFE--GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
Y G QIHG +++ F + GSL ++YVKCG L AR DQ E+ +ISW+
Sbjct: 586 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWS 645
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ GYA G EA LF + E + I
Sbjct: 646 SLILGYAQEGDFVEAMGLFKRLQE-------------------------------LSSQI 674
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L I+ V A + ++ GK++ + + VSN+L+DMY KCG + A F
Sbjct: 675 DSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCF 734
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M Q +D +SW ++TGY + G ++A++ F++M + P + + +L+AC++ +
Sbjct: 735 AEM-QLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMI 793
Query: 494 EQGKQI 499
++G+++
Sbjct: 794 KEGEEL 799
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+N++ L+++Y KC A +VF +V+ +++ G N +L +F M
Sbjct: 402 LNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEM 461
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
++GI P+ TF L AC ++ LQ K G +E ++ +Y + G
Sbjct: 462 GRQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGR 520
Query: 630 MKELE 634
+ E E
Sbjct: 521 INEAE 525
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 175/607 (28%), Positives = 286/607 (47%), Gaps = 41/607 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y +CG +D A FD+ E WNA++ A G R +ELF M S
Sbjct: 192 VTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRS 251
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
A ++A L G+ Q+H I V++ ++L+ Y +C + +A R+F D
Sbjct: 252 CAIALGACAAAGHLRGGI--QIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFAD 309
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-- 261
+ ++N VSW ++ G+ +V +F M+ E I P T+A+ + A + L
Sbjct: 310 MPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAIL 369
Query: 262 -EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ--PDERNIISWTSIVS 318
G +IH I + D +V SL MY + G L +AR + D + + ++S+T+++S
Sbjct: 370 DRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIS 429
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
YA +G R+A E+F EM R V +++T
Sbjct: 430 AYAHNGHPRQALEIFREMTARGVAP-------------------------------NEIT 458
Query: 379 LGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+L C + ++ G +H I SS+ F N+L+DMY KCG+L A F M
Sbjct: 459 FATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +D V+W ++ + G + A+ + M Q P T TLL ACAN+ L G
Sbjct: 519 -KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMG 577
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
++IH +R+ E + + AL +Y KC LE A R+++ DV SM+
Sbjct: 578 EKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQ 637
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
ALE++ M+ EG++P+ +TF +L++C G V +FF S+ YG P EH
Sbjct: 638 GLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEH 697
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ CM+ + R G +++ E+ ++ MPF P + + C+ + A +G AA L EL+
Sbjct: 698 FGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELD 757
Query: 677 PWAPFQF 683
P + QF
Sbjct: 758 PESTSQF 764
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 158/607 (26%), Positives = 284/607 (46%), Gaps = 51/607 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
LYA+L + C + +A+ R++ +++V+ L + Y +C D A LFD M
Sbjct: 52 LYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAM 111
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+R WN ++ + P TLEL+ M+ + + + + +L +
Sbjct: 112 PDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGR 171
Query: 164 QLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+H + RG N ++S+LV Y +C + A FDD + WN I+ A
Sbjct: 172 SIHYRVATGRGI--NSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGA 229
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV-V 281
G+ + A+ +FF+M E + + + A AL AC+ G+QIH I+ + G V V
Sbjct: 230 GHHRRAIELFFQM--EQHQCSDRSCAIALGACAAAGHLRGGIQIHDK-IQSEIHGTRVLV 286
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
L +L MYV+CG+L++A R D P RN++SWTS+++ A +G + +LF+ M
Sbjct: 287 LNALISMYVRCGKLDEALRVFADMP-HRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEG 345
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE---IKMGKE 397
+ + ++ T +++ A L + G++
Sbjct: 346 I-------------------------------NPNEKTYASVVSAIAHLGRDAILDRGRK 374
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ-MSQRRDKVSWNAVLTGYARR 456
+H I + ++ V N+L++MY + G L AR F + + VS+ +++ YA
Sbjct: 375 IHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHN 434
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVC 514
G +A+ F EM P++ TF T+LAAC I L G IH +I + + +
Sbjct: 435 GHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFA 494
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+LV++Y KC L +A RVF+ + D++ ++I + R AL+++ M + GI
Sbjct: 495 YNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGI 554
Query: 575 KPDHITFHGILLACIHEGNVKLALQFF-DSMRCKYGIIPQLEHYE-CMIKLYCRYGYMKE 632
PD T +L+AC + G++ + + ++R K + Q H++ + +Y + G +++
Sbjct: 555 HPDIATLSTLLVACANLGDLAMGEKIHRQALRSK---LEQDAHFQNALAAMYAKCGSLEK 611
Query: 633 LEDFVNR 639
R
Sbjct: 612 ATRLYRR 618
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 213/429 (49%), Gaps = 39/429 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V +LN I Y +CG LD+A +F +MP R+ SW +M+ A Q G +++LF M
Sbjct: 284 VLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIA 343
Query: 137 SGVSANQITYANVLRSSAE---ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G++ N+ TYA+V+ + A + L +++H I G + I+++SL++ Y + +
Sbjct: 344 EGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGL 403
Query: 194 MTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ +AR +FD I +K VS+ ++ Y G+ ++A+ +F +M + P TFA L
Sbjct: 404 LAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVL 463
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDD-VVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
AC + G IH +I+ + D SL +MY KCG L A + + +++
Sbjct: 464 AACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDL 523
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
++WT+I++ SG R A +L++ M + +
Sbjct: 524 VAWTTIIAANVQSGNNRAALDLYDRMLQSGI----------------------------- 554
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D TL +L CA L ++ MG+++H R+ + NAL MY KCG+L A
Sbjct: 555 --HPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKA 612
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
Y+ + D +W ++L ++++G + A+ ++EM+ E RP++ TF +L +C+
Sbjct: 613 -TRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQ 671
Query: 490 ISSLEQGKQ 498
+ +G++
Sbjct: 672 AGLVAEGRE 680
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 141/600 (23%), Positives = 251/600 (41%), Gaps = 87/600 (14%)
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
L LD ++ + YAN+LR + L +++H IV R N +L + Y
Sbjct: 37 LRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYA 96
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
+C A +FD + ++ WNV+++ +L A ++ + ++ +M E+ +P F
Sbjct: 97 RCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMW 156
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
A+ AC + +G IH + + + +L MY +CGR++ A D E
Sbjct: 157 AIVACGRIKDLAQGRSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELG 215
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
W +I+S A +G R A ELF +M +
Sbjct: 216 TAPWNAIMSALAGAGHHRRAIELFFQMEQHQC---------------------------- 247
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ + L CA ++ G ++H I + + + V NAL+ MY +CG L
Sbjct: 248 -----SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDE 302
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A F M R+ VSW +++ A+ G ++ F M E P++ T+ ++++A A
Sbjct: 303 ALRVFADMPH-RNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIA 361
Query: 489 NISS---LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLDV 543
++ L++G++IH + + + + + + +L+ +Y + L A VF +S V
Sbjct: 362 HLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTV 421
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC-----------IHE- 591
+ +MI + HN R+ALE+F M G+ P+ ITF +L AC IHE
Sbjct: 422 VSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHER 481
Query: 592 ------------------------GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
G++ A + F++M+ K L + +I +
Sbjct: 482 MIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTK-----DLVAWTTIIAANVQS 536
Query: 628 GYMKELEDFVNRM---PFNPTVPMLRKIFDKCRKNGYATLGEWAARRL--NELNPWAPFQ 682
G + D +RM +P + L + C G +GE R+ ++L A FQ
Sbjct: 537 GNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQ 596
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 12/270 (4%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
+S A + R +ES L + P F N ++ Y KCG+L A +F+ M +D +W
Sbjct: 473 ASGAWIHERMIESGLDSSDP----FAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTT 528
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ A Q+G L+L+ M SG+ + T + +L + A +L + +++H ++
Sbjct: 529 IIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSK 588
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+ +++L Y KC + A R++ + + +W ++ + G A+ ++
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYA 648
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M E +RP TF L +CS EG + H + + G + ++ +
Sbjct: 649 EMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRA 708
Query: 293 GRLEDARGLLDQ----PDERNIISWTSIVS 318
G+L DA LLD PDE I+W S++S
Sbjct: 709 GKLRDAEELLDSMPFYPDE---IAWQSLLS 735
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 58/129 (44%)
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
++A+ +++ + + LL C N +L+ G+++H ++ N + +
Sbjct: 33 DDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVF 92
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y +C C + AI +F N ++ F +R R+ LE++ M E +P
Sbjct: 93 QMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSAC 152
Query: 580 TFHGILLAC 588
F ++AC
Sbjct: 153 GFMWAIVAC 161
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 277/554 (50%), Gaps = 42/554 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++LR+SA + QLHG ++K GF + +L ++L+D Y KC + A +F +
Sbjct: 8 ADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPE 67
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N VSW ++ +L G+ +E + + M D+ P FT + +L AC + G+
Sbjct: 68 RNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVW 127
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IHG ++ FEG VV SL +Y K GR
Sbjct: 128 IHGACVRAGFEGHHVVANSLVLLYSK-------------------------------GGR 156
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD-----IDQVTLG 380
I +AR +F+ RN+++WNAM++GY + +++L M++ ++ D+ T
Sbjct: 157 IGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFA 216
Query: 381 LILNVCAGLSEIKMGKEVHG--FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L C L + G +VH I +SN ++ ALLDMY KC L + +
Sbjct: 217 SLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRL 276
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQG 496
++++ + W V+ G+A+ GQ +EAM F W + R +++ A+ + +EQG
Sbjct: 277 EQKNAIQWTTVIVGHAQEGQVKEAMELFGRF-WSSGVRADGHVLSSVVGVFADFALVEQG 335
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+Q+HC+ ++ ++V +L+++Y KC + A R F+E + +V+ +MI G +
Sbjct: 336 RQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKH 395
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G+EA+ +F M+ EG++PD + + +L AC H G V+ ++F ++R + P+ EH
Sbjct: 396 GHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEH 455
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ L R G + E +D V MP PTV + + + CR + T+G A L ++
Sbjct: 456 YACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAID 515
Query: 677 PWAPFQFKITTNRF 690
P + + +N F
Sbjct: 516 GDNPVNYVMLSNIF 529
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 232/462 (50%), Gaps = 42/462 (9%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ A + + A+S AI +L L+ L N I+ Y KCG L A +F M
Sbjct: 6 MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVS 162
PER+ SW A++ + ++G L L M S V+ N+ T + L++ ++
Sbjct: 66 PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+HG V+ GF G+ ++ +SLV Y K + DARR+FD +N V+WN ++ Y A
Sbjct: 126 VWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185
Query: 223 GNGKEAVVMFFKMLR-----EDIRPLNFTFANALFACSFLSSPYEGMQIHG--VIIKIDF 275
G+G++++++F +M + ED +P FTFA+ L AC L + EG Q+H VI +
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVST 245
Query: 276 EGDDVVLGSLTEMYVKCG-RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ ++ G+L +MYVKC L A + ++ +++N I WT+++ G+A G+++EA ELF
Sbjct: 246 ASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
W + D L ++ V A + ++
Sbjct: 306 R--------------------FWSSGV-----------RADGHVLSSVVGVFADFALVEQ 334
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G++VH + + ++ V+N+L+DMY KCG A F ++ R+ VSW A++ G
Sbjct: 335 GRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPA-RNVVSWTAMINGLG 393
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
+ G +EA+ F EM+ E P + + LL+AC++ +E+
Sbjct: 394 KHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEE 435
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 158/373 (42%), Gaps = 21/373 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNL-DDARGLFD 101
+A L + C S A E ++ + +V L ++ Y KC L A +F+
Sbjct: 215 FASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFN 274
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
+ +++ W ++ + Q G +ELF SGV A+ ++V+ A+ +
Sbjct: 275 RLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQ 334
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+Q+H VK +V + +SL+D Y KC + +A R F ++ +N VSW ++
Sbjct: 335 GRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGK 394
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID--FEGDD 279
G+G+EA+ MF +M E + P + L ACS S E + + I+ D
Sbjct: 395 HGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSH-SGLVEECRRYFSAIRHDRRLRPRA 453
Query: 280 VVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---REARELFNE 335
+ ++ + G L +A+ L+ P + W +++S + + REA E
Sbjct: 454 EHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLA 513
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ N +++ + + + W+E MR+ L G S +++G
Sbjct: 514 IDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRG-----------LRKQGGCSWVEVG 562
Query: 396 KEVHGFIHRNDYS 408
KE H F D S
Sbjct: 563 KEAHFFYGGGDDS 575
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 292/602 (48%), Gaps = 33/602 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + Y KCG+L DAR +FD MP R G+WN+M+ AY+ + G +F M
Sbjct: 195 VFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQ 254
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G +++T+ ++L + L K + I + F ++ + ++L+ Y +C D
Sbjct: 255 EGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPED 314
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++F ++ N ++W+ I+ + G+ EA+ F M +E I P TF + L +
Sbjct: 315 AAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTT 374
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S E +IH +I + + + +L +Y +C +DAR + DQ
Sbjct: 375 PSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL----------- 423
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
E+P N+ISWN+M+ Y + +AL M++ D+
Sbjct: 424 ------------------ELP--NLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDR 463
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V IL C S + K VH + + + V +L++MY K G L A + +
Sbjct: 464 VNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQE 523
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQ 495
M +++ +WN ++ GYA G+S EA+ ++ ++Q E P K TF ++L AC + +SL +
Sbjct: 524 MDEQQ-ITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAE 582
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK IH + + +V+ + AL +Y+KC +E A R+F + N M+ +
Sbjct: 583 GKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQ 642
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ E L++ M++EG+K + ITF +L +C H G + Q+F S+ GI + E
Sbjct: 643 HGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE 702
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R G ++E E ++++MP P + + CR G+ AA +L EL
Sbjct: 703 HYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLEL 762
Query: 676 NP 677
+P
Sbjct: 763 DP 764
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 248/504 (49%), Gaps = 34/504 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y +CG+L DA F ++ R+ SWN M+ AY+ L LF M GV+ N IT
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
VL S EL +H L ++RGF N ++ ++L++ YGKC + DA+ +F+++
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121
Query: 207 KNAVSWNVIVRRYLVAGNG-KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
KN V+WN ++ Y + G K AV +F +ML E ++ TF N L + + +G
Sbjct: 122 KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKF 181
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IH + + + D V +L Y KCG L DAR + D R++ +W S++S Y+IS R
Sbjct: 182 IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 241
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
EA +F M + + D+VT IL+
Sbjct: 242 SGEAFFIFQRMQQEG-------------------------------ERCDRVTFLSILDA 270
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C ++ GK V I + ++FV AL+ MY +C + A F +M Q + ++
Sbjct: 271 CVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQ-TNLIT 329
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W+A++T +A G EA+ F MQ E P++ TF +LL S LE+ +IH +
Sbjct: 330 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 389
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ + R ALV VY +C + A VF + ++I NSMI + ER +AL+
Sbjct: 390 EHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQ 449
Query: 565 VFGLMKKEGIKPDHITFHGILLAC 588
+F M+++GI+PD + F IL AC
Sbjct: 450 LFRTMQQQGIQPDRVNFMTILGAC 473
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 266/566 (46%), Gaps = 43/566 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQIT 145
YGKCG L DA+ +F+EM E++ +WNAMLG Y+ G + +ELF M GV AN IT
Sbjct: 103 YGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVIT 162
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ NVL S + L K +H + + +V + ++LV+ Y KC +TDAR++FD +
Sbjct: 163 FLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP 222
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ +WN ++ Y ++ EA +F +M +E R TF + L AC + G
Sbjct: 223 CRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKH 282
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+ I + FE D V +L MY +C EDA + + + N+I+W++I++ +A G
Sbjct: 283 VRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGH 342
Query: 326 IREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
EA F M + N +++ ++L G+T
Sbjct: 343 CGEALRYFRMMQQEGILPNRVTFISLLNGFTTP--------------------------- 375
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+GL E+ +H I + + NAL+++Y +C + AR F Q+ +
Sbjct: 376 -----SGLEEL---SRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL-ELP 426
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
+ +SWN+++ Y + + ++A+ F MQ + +P + F T+L AC S K +H
Sbjct: 427 NLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVH 486
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
V + + + + +LV +Y K L+ A + +E + N +I G+ + R R
Sbjct: 487 QCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSR 546
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EALE + ++ E I D +TF +L AC ++ + S + G+ + +
Sbjct: 547 EALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNAL 605
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTV 646
+Y + G M+ + MP V
Sbjct: 606 TNMYSKCGSMENARRIFDSMPIRSAV 631
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 240/516 (46%), Gaps = 34/516 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C + + + + + ++ +F+ I Y +C + +DA +F M
Sbjct: 264 FLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK 323
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ + +W+A++ A+ +G G L F M G+ N++T+ ++L L +
Sbjct: 324 QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR 383
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H LI + G + ++LV+ YG+C DAR +FD ++ N +SWN ++ Y+
Sbjct: 384 IHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCER 443
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+A+ +F M ++ I+P F L AC+ S +H + + G +V S
Sbjct: 444 HDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTS 503
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY K G L+ A +L + DE+ I +W +++GYA+ GR REA E + +
Sbjct: 504 LVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQK--------- 554
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
L EA+ +D+VT +LN C + + GK +H
Sbjct: 555 -----------LQLEAI-----------PVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 592
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
S++ V NAL +MY KCG++ +AR F M R VSWN +L YA+ G+SEE +
Sbjct: 593 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI-RSAVSWNGMLQAYAQHGESEEVLK 651
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ-IHCFVIRNCYEINVVCRGALVEVY 522
+M+ E + + TF ++L++C++ + +G Q H E+ G LV++
Sbjct: 652 LIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 711
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+ L+ A + + I+ + +LG C ++
Sbjct: 712 GRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQK 747
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 144/273 (52%), Gaps = 3/273 (1%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y+ G + +A F ++ RNV+SWN M++ Y+ ++EAL M + +TL
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+LN C E++ G VH + N V+ ALL+MY KCG L A+ F +M++
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121
Query: 440 RRDKVSWNAVLTGYARRGQS-EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+ + V+WNA+L Y+ +G + A+ F+ M E + + TF +L + + +L +GK
Sbjct: 122 K-NVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
IH V + + ++V ALV YTKC L A +VF V NSMI + +E
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
R EA +F M++EG + D +TF IL AC++
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVN 273
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
PV + + C SS ++ E + + SN V V + N Y KCG++++AR
Sbjct: 561 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARR 620
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD MP R SWN ML AY Q+G L+L M GV N IT+ +VL S +
Sbjct: 621 IFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGL 680
Query: 159 LGVSKQ-LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ Q H L RG LVD G+ + +A +
Sbjct: 681 IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 722
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y++C L A+ F + + +V+ N MI + + +EAL +F M EG+ P+ IT
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 581 FHGILLAC 588
+L +C
Sbjct: 61 LVAVLNSC 68
>gi|414884271|tpg|DAA60285.1| TPA: hypothetical protein ZEAMMB73_421255 [Zea mays]
Length = 686
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 275/550 (50%), Gaps = 10/550 (1%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++L ++ +G+ QLHGL + G L L+ Y + +
Sbjct: 64 ASLLHLHRSDIRIGL--QLHGLSLSAGLSCYSHLLPHLLSFYSHHPSLLPTASSLA-AGS 120
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQ 265
+ +NV++ L G + A+ + KM+ +D + P FT+ L AC+ + G
Sbjct: 121 TSPEPYNVLISACLNHGLPRHALAAYQKMVDKDAVPPDAFTYPKVLRACAETADLVLGRA 180
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H +G +L MY KCG L AR + D D R+++SW S++SGYA SG+
Sbjct: 181 VHVRAAAAGMDGHLFFQNALVSMYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQ 240
Query: 326 IREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
REA ELF +M E N ++WN + GY + ++ AL + M + ++D VTL +
Sbjct: 241 WREAVELFRQMQAEGAEANSVTWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVI 300
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
N C+ +++GKE+HG R V NA++ MY +C ++ A + F M +
Sbjct: 301 GSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVVNAVITMYARCNDMERALMLFRTM-RCP 359
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIH 500
V+WN +L G+A +E A F EM + +P+ T T LA CA +++L+ G+++H
Sbjct: 360 GLVAWNTMLAGFALLDDAEAASRLFREMVCSDVQPNYVTVVTYLALCARVANLQHGQELH 419
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+IR ++ + +L+++Y+K L A VF D+I SMI G+ +G
Sbjct: 420 AHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQNVFDTMDDRDMISFTSMIAGYGMQGKGI 479
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
+L F M GI PD I +L AC H G V + FD M YGI PQ+EHY CM
Sbjct: 480 VSLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVSSYGIKPQMEHYSCM 539
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ LY R G +++ E+ +N+ PF PT M+ + C + G +GE +ARRL E+
Sbjct: 540 VDLYARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNVIIGERSARRLLEMKTENA 599
Query: 681 FQFKITTNRF 690
+ + N +
Sbjct: 600 GHYVLIANMY 609
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 214/489 (43%), Gaps = 78/489 (15%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+N ++ A +G P L + M + V + TY VLR+ AE +L + + +H
Sbjct: 126 YNVLISACLNHGLPRHALAAYQKMVDKDAVPPDAFTYPKVLRACAETADLVLGRAVHVRA 185
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
G G++ +++LV Y KC + ARR+FD + N++ VSWN ++ Y +G +EAV
Sbjct: 186 AAAGMDGHLFFQNALVSMYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAV 245
Query: 230 VMFFKM-------------------------------LREDIR---PLNF-TFANALFAC 254
+F +M +R+ +R ++F T AC
Sbjct: 246 ELFRQMQAEGAEANSVTWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNAC 305
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S G +IHG+ +++ D V+ ++ MY +C +E A L +++W
Sbjct: 306 SRAGWLRLGKEIHGLAVRMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRCPGLVAWN 365
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++++G+A+ A LF EM +V
Sbjct: 366 TMLAGFALLDDAEAASRLFREMVCSDV-------------------------------QP 394
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ VT+ L +CA ++ ++ G+E+H I R + + N+L+DMY K G L A+ F
Sbjct: 395 NYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQNVF 454
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
M RD +S+ +++ GY +G+ ++ F +M P T+L+AC++ +
Sbjct: 455 DTMDD-RDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLV 513
Query: 494 EQG-----KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
++G K + + I+ E + C +V++Y + LE A + ++ +
Sbjct: 514 DEGEELFDKMVSSYGIKPQME-HYSC---MVDLYARAGLLEKAEELLNQTPFPPTSTMVA 569
Query: 549 MILGFCHNE 557
++G CH +
Sbjct: 570 ALVGACHEQ 578
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 37/344 (10%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K P Y + + CA + +V R + +F N + Y KCG+L
Sbjct: 152 KDAVPPDAFTYPKVLRACAETADLVLGRAVHVRAAAAGMDGHLFFQNALVSMYAKCGDLA 211
Query: 95 DARGLFDEMPERDGGSWNAML-----------------------------------GAYT 119
AR +FD M RD SWN+M+ G Y
Sbjct: 212 AARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEANSVTWNTIAGGYI 271
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV- 178
Q L L DM G + +T + + L + K++HGL V R C +
Sbjct: 272 QMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLAV-RMQCHEID 330
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++++ Y +C M A +F ++ V+WN ++ + + + + A +F +M+
Sbjct: 331 SVVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEAASRLFREMVCS 390
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
D++P T L C+ +++ G ++H II+ F+ ++ SL +MY K GRL A
Sbjct: 391 DVQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVA 450
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+ + D D+R++IS+TS+++GY + G+ + F +M + ++
Sbjct: 451 QNVFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIM 494
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 1/168 (0%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
SD +Y LCA + ++L ++++ L N I+ Y K G L
Sbjct: 390 SDVQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSV 449
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A+ +FD M +RD S+ +M+ Y G +L F M SG+ + I VL + +
Sbjct: 450 AQNVFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSH 509
Query: 156 ELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ ++L +V G + S +VD Y + ++ A + +
Sbjct: 510 SGLVDEGEELFDKMVSSYGIKPQMEHYSCMVDLYARAGLLEKAEELLN 557
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 282/562 (50%), Gaps = 48/562 (8%)
Query: 157 LELGVSKQLHGLI----VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
++ G S H L +K F N IL A+ K + ARR+FD+I ++VSW
Sbjct: 59 VKTGSSSDAHRLFDEMPLKTTFSWNTILS-----AHAKAGNLDSARRVFDEIPQPDSVSW 113
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y G K AV F +M+ I P FTF N L +C+ + G ++H ++K
Sbjct: 114 TTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVK 173
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
+ G V SL MY KCG A+ + D+ ++ +W +++S + + A L
Sbjct: 174 LGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALAL 233
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
F++M + +++SWN+++ GY AL+ F F+++ ++ D+ TLG +L+ CA
Sbjct: 234 FDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRES 293
Query: 392 IKMGKEVHGFIHRNDY---------------------------------SSNIFVSNALL 418
+K+GK++H I R D S N+ +LL
Sbjct: 294 LKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLL 353
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
D Y K G++ AR F + + RD V+W A++ GYA+ G +A+ F M E +P+
Sbjct: 354 DGYFKIGDIDPARAIFDSL-KHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNN 412
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKCCCLEYAIRVFK 536
+T +L+ ++++SL+ GKQ+H IR E++ V G AL+ +Y++ ++ A ++F
Sbjct: 413 YTLAAVLSVISSLASLDHGKQLHAVAIR-LEEVSSVSVGNALITMYSRSGSIKDARKIFN 471
Query: 537 ESSSL-DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
S D + SMIL + G EA+E+F M + +KPDHIT+ G+L AC H G V+
Sbjct: 472 HICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVE 531
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
+F+ M+ + I P HY CMI L R G ++E +F+ MP P V +
Sbjct: 532 QGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591
Query: 656 CRKNGYATLGEWAARRLNELNP 677
CR + Y L + AA +L ++P
Sbjct: 592 CRVHKYVDLAKVAAEKLLLIDP 613
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 230/461 (49%), Gaps = 35/461 (7%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P F N + + K GNLD AR +FDE+P+ D SW M+ Y G + FL
Sbjct: 75 PLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFL 134
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC- 191
M SG+S Q T+ NVL S A L V K++H +VK G G V + +SL++ Y KC
Sbjct: 135 RMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCG 194
Query: 192 -----------MVMTD-------------------ARRMFDDIQNKNAVSWNVIVRRYLV 221
M + D A +FD + + + VSWN I+ Y
Sbjct: 195 DSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCH 254
Query: 222 AGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G A+ F ML+ ++P FT + L AC+ S G QIH I++ D +
Sbjct: 255 QGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGA 314
Query: 281 VLGSLTEMYVKCGRLEDARGLLD--QPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L MY K G +E A +++ N+I++TS++ GY G I AR +F+ +
Sbjct: 315 VGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKH 374
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+V++W AM+ GY ++ L +AL LM + + TL +L+V + L+ + GK++
Sbjct: 375 RDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQL 434
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H R + S++ V NAL+ MY + G+++ AR F + RD ++W +++ A+ G
Sbjct: 435 HAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGL 494
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
EA+ F +M + +P T+ +L+AC ++ +EQGK
Sbjct: 495 GNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS 535
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 203/453 (44%), Gaps = 79/453 (17%)
Query: 260 PYEGMQIHGVIIKIDFEGDDVVL-GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
P+ G IH IIK V L +L +YVK G DA L D+ + SW +I+S
Sbjct: 28 PFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILS 87
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+A +G + AR +F+E+P+ + +SW M+ GY L+K A+ M + Q T
Sbjct: 88 AHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFT 147
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L CA + +GK+VH F+ + S + V+N+LL+MY KCG+ A++ F +M
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 439 QRR------------------------------DKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ D VSWN+++TGY +G A+ +FS
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 469 MQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M + +P KFT ++L+ACAN SL+ GKQIH ++R +I AL+ +Y K
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 527 CLEYAIR---------------------------------VFKESSSLDVIICNSMILGF 553
+E A R +F DV+ +MI+G+
Sbjct: 328 AVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY 387
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N +AL +F LM +EG KP++ T +L +V +L D + + + +
Sbjct: 388 AQNGLISDALVLFRLMIREGPKPNNYTLAAVL-------SVISSLASLDHGKQLHAVAIR 440
Query: 614 LEHYE------CMIKLYCRYGYMKELEDFVNRM 640
LE +I +Y R G +K+ N +
Sbjct: 441 LEEVSSVSVGNALITMYSRSGSIKDARKIFNHI 473
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 202/484 (41%), Gaps = 103/484 (21%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN----- 92
P ++ + ++ CA+++A+ +K+ S +V + V + N + Y KCG+
Sbjct: 142 SPTQFT-FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAK 200
Query: 93 --------------------------LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
D A LFD+M + D SWN+++ Y G+ R
Sbjct: 201 VVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIR 260
Query: 127 TLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK-----RGFCG---- 176
LE F + S + ++ T +VL + A L + KQ+H IV+ G G
Sbjct: 261 ALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALI 320
Query: 177 ------------------------NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
NVI +SL+D Y K + AR +FD +++++ V+W
Sbjct: 321 SMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAW 380
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y G +A+V+F M+RE +P N+T A L S L+S G Q+H V I+
Sbjct: 381 TAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIR 440
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP-DERNIISWTSIVSGYAISGRIREARE 331
++ V +L MY + G ++DAR + + R+ ++WTS++ A G EA E
Sbjct: 441 LEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIE 500
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF +M N+ D +T +L+ C +
Sbjct: 501 LFEKMLRINL-------------------------------KPDHITYVGVLSACTHVGL 529
Query: 392 IKMGKEVHGF---IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
++ GK +H + +S+ + ++D+ + G L A + M D V+W +
Sbjct: 530 VEQGKSYFNLMKNVHNIEPTSSHYA--CMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGS 587
Query: 449 VLTG 452
+L+
Sbjct: 588 LLSS 591
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 6/301 (1%)
Query: 23 SKTLTKTISGHL-KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN 81
S L K I H+ ++D ++ ++ L + A S A+ A ++ +T P+ V
Sbjct: 293 SLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVE--ITGTPSLNVIAFT 350
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
++ Y K G++D AR +FD + RD +W AM+ Y QNG L LF M G
Sbjct: 351 SLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKP 410
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N T A VL + L KQLH + ++ +V + ++L+ Y + + DAR++F
Sbjct: 411 NNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIF 470
Query: 202 DDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
+ I ++ ++W ++ G G EA+ +F KMLR +++P + T+ L AC+ +
Sbjct: 471 NHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLV 530
Query: 261 YEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVS 318
+G ++ + + E + ++ + G LE+A + + P E ++++W S++S
Sbjct: 531 EQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLS 590
Query: 319 G 319
Sbjct: 591 S 591
>gi|115474467|ref|NP_001060830.1| Os08g0112400 [Oryza sativa Japonica Group]
gi|42408356|dbj|BAD09508.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622799|dbj|BAF22744.1| Os08g0112400 [Oryza sativa Japonica Group]
Length = 667
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 260/484 (53%), Gaps = 3/484 (0%)
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
A WN+++ Y G ++ ++ + KM+ + FT+ + L AC L G I
Sbjct: 109 AFPWNLLIWGYAGRGLWEDVILSYEKMVGWGVAADRFTYPSVLRACGELREVTIGRNIEQ 168
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I + + D V +L MY KCG LEDAR + D R+++SW ++VS YA +G+ +
Sbjct: 169 RIRRCRYGLDMYVWNALVGMYAKCGELEDARRVFDGMAVRDVVSWNTMVSAYASTGKSNK 228
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK-TTKDIDQVTLGLILNVCA 387
A EL ++P NV++WNA+ AG ++ + E + V +R +D VT+ + L C
Sbjct: 229 AFELLQQVPGANVVTWNAVAAGNLKAGNYDEVIRLVSQVRGYHGTGVDSVTIVIGLKACG 288
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +G+E+HG R + S V N+L+ MY +CG + SA + F S R +WN
Sbjct: 289 RTGYLSVGRELHGVAVRLCFDSLECVVNSLITMYSRCGMMSSACLLFRACSVR-SITTWN 347
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++L G+A Q EEA F EM + P+ T T+L+ A + L G+++HC+++++
Sbjct: 348 SLLAGFAFMEQIEEASLIFREMIGFGVCPNGVTVLTMLSLGARVGHLCHGRELHCYILKH 407
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ + + +LV++Y+KC + A RVF+ D S++LG+ G +L++F
Sbjct: 408 ELDSSKLMENSLVDMYSKCRQMVVAQRVFELMQFRDKHAYTSLVLGYGLQREGHVSLKLF 467
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M I+PDH+TF +L AC H G V F M +GI P++EH+ CM+ LYCR
Sbjct: 468 DEMIVNSIEPDHVTFVAVLSACSHSGLVTQGQLLFAKMVSIFGIAPRVEHFSCMVDLYCR 527
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G +K E +++MPF PT ML + + CR +G +G+ AA++L + P +++
Sbjct: 528 EGLLKMAEVIIDKMPFQPTAAMLATLIEACRIHGNTEIGDRAAKKLLAMRTNNPGHYRLI 587
Query: 687 TNRF 690
N +
Sbjct: 588 ANMY 591
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 32/324 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + + R +E + +++ N + Y KCG L+DAR +FD M
Sbjct: 147 YPSVLRACGELREVTIGRNIEQRIRRCRYGLDMYVWNALVGMYAKCGELEDARRVFDGMA 206
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDM------------------------------ 134
RD SWN M+ AY G + EL +
Sbjct: 207 VRDVVSWNTMVSAYASTGKSNKAFELLQQVPGANVVTWNAVAAGNLKAGNYDEVIRLVSQ 266
Query: 135 --NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ G + +T L++ L V ++LHG+ V+ F + +SL+ Y +C
Sbjct: 267 VRGYHGTGVDSVTIVIGLKACGRTGYLSVGRELHGVAVRLCFDSLECVVNSLITMYSRCG 326
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+M+ A +F ++ +WN ++ + +EA ++F +M+ + P T L
Sbjct: 327 MMSSACLLFRACSVRSITTWNSLLAGFAFMEQIEEASLIFREMIGFGVCPNGVTVLTMLS 386
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ + G ++H I+K + + ++ SL +MY KC ++ A+ + + R+ +
Sbjct: 387 LGARVGHLCHGRELHCYILKHELDSSKLMENSLVDMYSKCRQMVVAQRVFELMQFRDKHA 446
Query: 313 WTSIVSGYAISGRIREARELFNEM 336
+TS+V GY + + +LF+EM
Sbjct: 447 YTSLVLGYGLQREGHVSLKLFDEM 470
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
++N I Y +CG + A LF R +WN++L + +F +M G
Sbjct: 314 VVNSLITMYSRCGMMSSACLLFRACSVRSITTWNSLLAGFAFMEQIEEASLIFREMIGFG 373
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
V N +T +L A L ++LH I+K + ++E+SLVD Y KC M A+
Sbjct: 374 VCPNGVTVLTMLSLGARVGHLCHGRELHCYILKHELDSSKLMENSLVDMYSKCRQMVVAQ 433
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F+ +Q ++ ++ +V Y + G ++ +F +M+ I P + TF L ACS
Sbjct: 434 RVFELMQFRDKHAYTSLVLGYGLQREGHVSLKLFDEMIVNSIEPDHVTFVAVLSACSHSG 493
Query: 259 SPYEGMQIHGVIIKIDFEGDDVV-LGSLTEMYVKCGRLEDARGLLDQ 304
+G + ++ I V + ++Y + G L+ A ++D+
Sbjct: 494 LVTQGQLLFAKMVSIFGIAPRVEHFSCMVDLYCREGLLKMAEVIIDK 540
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 184/679 (27%), Positives = 327/679 (48%), Gaps = 59/679 (8%)
Query: 25 TLTKTISGHLK----------------SDEPVSYSLYAHLFQLCASSKAIVEARKLESNL 68
T T IS HLK SDE + + +A L + C + + ++ L
Sbjct: 116 TWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLL 175
Query: 69 VTFYPTPPVFLLNRAIECYGKCGN-LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
V F + + Y K G+ L DA +F + ERD +WN M+ + QNG
Sbjct: 176 VRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMV 235
Query: 128 LELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
LF +M G+ ++IT+A++L+ + L Q+HG++ K G +V++ES++VD
Sbjct: 236 QRLFSEMWEEQGLKPDRITFASLLKCCSV---LNEVMQIHGIVYKFGAEVDVVVESAMVD 292
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC ++ R++FD ++ K+ W+ ++ Y + G+EAV F M R+ ++
Sbjct: 293 LYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHV 352
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
++ L AC + G+Q+HG++IK + D V L +Y G L D L + D
Sbjct: 353 LSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRID 412
Query: 307 ERNIISWTSIVSGYAISGR-IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+++I++W S++ A G+ +LF E
Sbjct: 413 DKDIVAWNSMILAQARPGQGCGRCMQLFQE------------------------------ 442
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
L R T I TL +L C S++ G+++H I ++ + V NAL+ MY +C
Sbjct: 443 LRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECK 502
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+ A F + R+D SW++++ + +A+ EM E + ++ +
Sbjct: 503 QIDDAFKAFVDIV-RKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCI 561
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+AC+ + ++ +GKQ+H F I++ Y +V +++++Y KC +E + +VF E + +
Sbjct: 562 SACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEV 621
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N++I G+ H+ + ++A+EV ++K G+ P+H+TF ++ AC H G V+ F M
Sbjct: 622 TFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLM 681
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
KY I P+ EHY C++ Y R G ++E V + + + R + CR + +
Sbjct: 682 LDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHSNRKI 738
Query: 665 GEWAARRLNELNP--WAPF 681
GE +A ++ ELNP AP+
Sbjct: 739 GEKSAMKMIELNPSDHAPY 757
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 169/648 (26%), Positives = 283/648 (43%), Gaps = 80/648 (12%)
Query: 48 LFQLCASSKAIV--EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
L L S I+ + ++ + L+ L N + Y K N A LFD+MP
Sbjct: 52 LLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPN 111
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
R+ +W ++ ++ + G + E+F M S N+ T+A +LR+ V Q+
Sbjct: 112 RNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQI 171
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HGL+V+ G SSLV Y K + DA R+F + ++ V+WNV++ + G+
Sbjct: 172 HGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGD 231
Query: 225 GKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ +F +M E ++P TFA+ L CS L+ E MQIHG++ K E D VV
Sbjct: 232 FRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLN---EVMQIHGIVYKFGAEVDVVVES 288
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
++ ++Y KC + R + D ++++ W+S++SGY ++ R EA F +M + V
Sbjct: 289 AMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRV-- 346
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+DQ L L C + ++ G +VHG +
Sbjct: 347 -----------------------------KLDQHVLSSTLKACVEIEDLNTGVQVHGLMI 377
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS-EEA 462
+N + ++ FV++ LL++Y G L F ++ +D V+WN+++ AR GQ
Sbjct: 378 KNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDD-KDIVAWNSMILAQARPGQGCGRC 436
Query: 463 MTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
M F E++ T + T +L +C S L G+QIH ++++ + + ALV
Sbjct: 437 MQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVH 496
Query: 521 VYTKCCCLEYAIRVF-----KESSSLDVIICNSMILGFCHNER-GREALEVFGLMKKEGI 574
+Y++C ++ A + F K+ SS S I+G C R +ALE+ M EGI
Sbjct: 497 MYSECKQIDDAFKAFVDIVRKDDSSW------SSIIGTCKQNRMESKALELCKEMLDEGI 550
Query: 575 KPDHITFHGILLAC-----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ + AC I EG C I + I +Y + G
Sbjct: 551 NFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSI------IDMYAKCGN 604
Query: 630 MKELEDFV------NRMPFNPTVP---------MLRKIFDKCRKNGYA 662
++E E N + FN + ++ K KNG A
Sbjct: 605 IEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVA 652
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/539 (30%), Positives = 279/539 (51%), Gaps = 43/539 (7%)
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LG+ Q H I+K GF NV + S++VD Y KC ++ AR +FD + + V+WN +
Sbjct: 84 SFHLGI--QAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSL 141
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ YL K A+ +F KML+ I F+ ++ L CS L + G Q+HG+I+K
Sbjct: 142 IYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGL 201
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ VV SL +MY KCG ++D+R + D RN+I+WTS+V+GY+ + EA L E
Sbjct: 202 GYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKE 261
Query: 336 MPER----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
M + N +++N++L+ ++ D ++ L ++ C
Sbjct: 262 MVLQDLRPNCVTYNSLLSSFSGP--------------------DCLSYCLQVHCCI---- 297
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
I++G E SN++++ L+ +Y KC + + D ++WNAV+
Sbjct: 298 IQLGLE-----------SNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIA 346
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
GY++ G+ EEA+ F EM Q +T +++ A N S LE+GK +H + R Y
Sbjct: 347 GYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYIS 406
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
++ + LV +Y +C + + RVF DVI N+++ F H+ GREA+E+F M+
Sbjct: 407 HLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMR 466
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP-QLEHYECMIKLYCRYGY 629
K IKP+ TF +L AC H G V +++FD+M+ + P ++EHY ++ + R GY
Sbjct: 467 KTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGY 526
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ E E F+N MP P + + + +G + +A++L EL P P + + ++
Sbjct: 527 LNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSS 585
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 227/451 (50%), Gaps = 34/451 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ CA S + + S ++ V++ + ++ Y KCG + AR LFD+MP+R
Sbjct: 75 IVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRT 134
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+WN+++ Y P +ELF+ M + ++ + + ++ L ++ V Q+HG
Sbjct: 135 VVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHG 194
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
LI+K G NV++ +SLVD Y KC + D+R +FD + N+N ++W +V Y E
Sbjct: 195 LILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDE 254
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ + +M+ +D+RP T+ + L + S +Q+H II++ E + + +L
Sbjct: 255 AMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVT 314
Query: 288 MYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+Y KC LED + + + I+W ++++GY+ GR EA F+EM + +
Sbjct: 315 VYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGI----- 369
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
DID TL ++ S ++ GK +H IHR
Sbjct: 370 --------------------------DIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTG 403
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
Y S++ V N L+ MY +CG + ++ F+ M + D +SWNA+LT +A G EA+ F
Sbjct: 404 YISHLNVQNGLVSMYARCGAIGDSKRVFWFM-EEHDVISWNALLTAFAHHGYGREAVELF 462
Query: 467 SEM-QWETRPSKFTFETLLAACANISSLEQG 496
+M + E +P+ TF +L AC+++ +++G
Sbjct: 463 EQMRKTEIKPNSSTFLAVLCACSHVGFVDKG 493
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 185/650 (28%), Positives = 306/650 (47%), Gaps = 43/650 (6%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ P S +L L L AS ARK + V + N I Y KCG
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFF 386
Query: 94 DDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
A +F + + D SWN MLGA G+ + F M +G+ N++++ +L +
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446
Query: 153 SAEELELGVSKQLHGLIV--KRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKN 208
+ L +++H LI+ +R + + + + LV YGKC + +A +F + + +++
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSV-ATMLVSMYGKCGSIAEAELVFKEMPLPSRS 505
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V+WNV++ Y KEA +ML+ + P +F + L +C E +
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRM 562
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I++ + + +L M+ +C LE AR + D+ D +++SWT++VS A + +E
Sbjct: 563 CILESGYR-SACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKE 621
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
LF M VI D+ TL L+ C
Sbjct: 622 VHHLFRRMQLEGVIP-------------------------------DKFTLATTLDTCLD 650
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+ + +GK +H + ++I V NALL+MY CG+ R A + F++ + RD VSWN
Sbjct: 651 STTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREA-LSFFETMKARDLVSWNI 709
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+ YA+ G ++EA+ F MQ E +P K TF T L + + GK H +
Sbjct: 710 MSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESG 769
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +V LV++Y KC L+ AI +F+ + V++ N++I + EA+++F
Sbjct: 770 LDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFW 829
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M++EG++PD T I+ AC H G V+ F +M+ +GI P LEHY C + L R
Sbjct: 830 KMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRA 889
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G ++ E + +MPF + + C+ G A LGE A+R+ EL+P
Sbjct: 890 GQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP 939
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 269/582 (46%), Gaps = 64/582 (10%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
++SG ++ D Y L Q C S + + ++ + +FL N I Y
Sbjct: 12 SLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYV 71
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYA 147
+CG+L++A +F +M ER+ SW A++ A Q+G R LF M S + N T
Sbjct: 72 RCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLV 131
Query: 148 NVLRSSAEELELGVSKQLHGLI----VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+L + A +L + + +H +I ++R ++ +++++ Y KC DA +F
Sbjct: 132 AMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLT 191
Query: 204 IQNKNAVSWNVIV------RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
I K+ VSW + RR+ +A+ +F +ML + + P TF AL AC+ L
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFY-----PDALRIFREMLLQPLAPNVITFITALGACTSL 246
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL---LDQPDERNIISWT 314
+G +H ++ + D + +L MY KCG E A G+ + E +++SW
Sbjct: 247 R---DGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWN 303
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++S +GR +A +F + L G MR
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLR----------LEG----------------MRP----- 332
Query: 375 DQVTLGLILNVCAGLSEIKMG--KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ VTL ILN A S + G ++ HG I + Y ++ V NA++ MY KCG +A
Sbjct: 333 NSVTLITILNALAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWT 391
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F ++ + D +SWN +L R + + +F M P+K +F +L AC+N
Sbjct: 392 VFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSE 451
Query: 492 SLEQGKQIHCFVI---RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES--SSLDVIIC 546
+L+ G++IH ++ R+ E +V LV +Y KC + A VFKE S ++
Sbjct: 452 ALDFGRKIHSLILTRRRDYVESSVATM--LVSMYGKCGSIAEAELVFKEMPLPSRSLVTW 509
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N M+ + N+R +EA M + G+ PD ++F +L +C
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 175/368 (47%), Gaps = 26/368 (7%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVF 365
E+++ +++ Y G + EA +F++M ERNV+SW A+++ +S + A F
Sbjct: 57 EQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRT 116
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH----RNDYSSNIFVSNALLDMY 421
++ +++ + TL +LN CA ++ +G+ +H I + ++ V NA+++MY
Sbjct: 117 MLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMY 176
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR-RGQSEEAMTSFSEMQWET-RPSKFT 479
KCG+ A F + + +D VSW A+ YA+ R +A+ F EM + P+ T
Sbjct: 177 AKCGSPEDAIAVFLTIPE-KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVIT 235
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
F T L AC +SL G +H + + + AL+ +Y KC E A VFK +
Sbjct: 236 FITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMA 292
Query: 540 S---LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S LD++ N+MI R +A+ +F ++ EG++P+ +T IL A G
Sbjct: 293 SRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
A + F + G + + +I +Y + G+ F+ + R+I KC
Sbjct: 353 AARKFHGRIWESGYLRDVVVGNAIISMYAKCGF------------FSAAWTVFRRIRWKC 400
Query: 657 RKNGYATL 664
+ T+
Sbjct: 401 DVISWNTM 408
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 26/332 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y CG+ +A F+ M RD SWN M AY Q G + LF M GV
Sbjct: 677 NALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVK 736
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+++T++ L S + K HGL + G +V + + LV Y KC + +A +
Sbjct: 737 PDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISL 796
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F V N I+ G +EAV MF+KM +E +RP T + + AC
Sbjct: 797 FRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMV 856
Query: 261 YEGMQIHGVIIKIDFEGDDVVL---GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSI 316
EG + ++ G L ++ + G+LE A ++ + P E N + WTS+
Sbjct: 857 EEGCS--SFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSL 914
Query: 317 VSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+ + G R A+ + E+ N + + Y + WK+A
Sbjct: 915 LGTCKLQGDAELGERCAQRIL-ELDPHNSAAHVVLSNIYCATGKWKDA------------ 961
Query: 373 DIDQVTLGLILNV--CAGLSEIKMGKEVHGFI 402
D+D+ L L NV G+S +++GK+VH F+
Sbjct: 962 DVDRKKL-LDQNVKNAPGMSWLEIGKQVHEFV 992
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 195/668 (29%), Positives = 337/668 (50%), Gaps = 77/668 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT---PPVFLLNRAIECYGKCGNLDD 95
P Y+ + + C+ ++ + R LE + T + +F+ + + + K G+L
Sbjct: 204 PTEYTFGSLVTTACSLTEP--DVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIH 261
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--- 152
AR +F++M R+ + N ++ + + +LF+DMN S + + +Y +L S
Sbjct: 262 ARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPE 320
Query: 153 --SAEELELGVSKQLHGLIVKRGFCGNVI-LESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
AEE+ L +++HG ++ G ++ + + LV+ Y KC + DARR+F + K++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDS 380
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
VSWN ++ EAV + M R +I P +FT +++ +C+ L G QIHG
Sbjct: 381 VSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGE 440
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+K+ G D+ N+ ++++ YA +G + E
Sbjct: 441 SLKL---GIDL----------------------------NVSVSNALMTLYAETGCLNEC 469
Query: 330 RELFNEMPERNVISWNAM---LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
R++F+ MPE + +SWN++ LA RSL EA+ + + ++++T +L+
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALASSERSL--PEAVACFLNALRAGQKLNRITFSSVLSAV 527
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ LS ++GK++HG + + + NAL+ Y KCG + F +MS+RRD V+W
Sbjct: 528 SSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTW 587
Query: 447 NAVLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
N++++GY +A+ + MQ R F + T+L+A A++++LE+G ++H +R
Sbjct: 588 NSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR 647
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
C E +VV ALV++Y+KC L+YA+R F N+M L
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFF-----------NTMPL-------------- 682
Query: 566 FGLMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
F MK +G PDH+TF G+L AC H G ++ + F+SM YG+ P++EH+ CM L
Sbjct: 683 FANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLL 742
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNG-YATLGEWAARRLNELNPWAPFQ 682
R G + +LEDF+ +MP P V + R + CR NG A LG+ AA L +L P
Sbjct: 743 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 802
Query: 683 FKITTNRF 690
+ + N +
Sbjct: 803 YVLLGNMY 810
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 266/572 (46%), Gaps = 37/572 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V+L N I Y + G+ AR +FDEMP R+ SW ++ Y++NG L DM
Sbjct: 36 VYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVK 95
Query: 137 SGVSANQITYANVLRSSAEELELGV--SKQLHGLIVKRGFCGNVILESSLVDAYGKC-MV 193
GV +N + + LR+ E +G+ +Q+HGL+ K + + ++ + L+ Y KC
Sbjct: 96 EGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGS 155
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A R FDD+Q KN+VSWN I+ Y G+ + A MF+ M + RP +TF + +
Sbjct: 156 LGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTT 215
Query: 254 CSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
L+ P + QI I K F D V L + K G L AR + +Q + RN +
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAV 275
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+ ++ G EA +LF +M N+M+ S +V L+
Sbjct: 276 TLNGLMVGLVRQKWGEEATKLFMDM--------NSMIDVSPES--------YVILLSSFP 319
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSA 430
+ +GL K G+EVHG + + + N L++MY KCG++ A
Sbjct: 320 EYSLAEEVGL-----------KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
R F M++ +D VSWN+++TG + EA+ + M + E P FT + +++CA+
Sbjct: 369 RRVFCFMTE-KDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCAS 427
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ + G+QIH ++ ++NV AL+ +Y + CL ++F D + NS+
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSI 487
Query: 550 ILGFCHNERG-REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
I +ER EA+ F + G K + ITF +L A +L Q + KY
Sbjct: 488 IGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKY 546
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
I + +I Y + G M E +RM
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 224/498 (44%), Gaps = 44/498 (8%)
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
G +K H + K G +V L ++L++AY + AR++FD++ +N VSW +V Y
Sbjct: 18 GAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGY 77
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP--YEGMQIHGVIIKIDFEG 277
G KEA+V M++E + ++ F +AL AC L S G QIHG++ K+ +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAV 137
Query: 278 DDVVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV L MY KC G L A D +N +SW SI+S Y+ +G R A ++F
Sbjct: 138 DAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMF--- 194
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE--IKM 394
+ M+ + T G ++ L+E +++
Sbjct: 195 ----------------------------YSMQCDGSRPTEYTFGSLVTTACSLTEPDVRL 226
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+++ I ++ + +++FV + L+ + K G+L AR F QM + R+ V+ N ++ G
Sbjct: 227 LEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQM-ETRNAVTLNGLMVGLV 285
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANIS-----SLEQGKQIHCFVIRN-CY 508
R+ EEA F +M S ++ LL++ S L++G+++H VI
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ V LV +Y KC + A RVF + D + NSMI G N EA+E +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQS 405
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M++ I P T + +C KL Q K GI + ++ LY G
Sbjct: 406 MRRHEILPGSFTLISSISSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETG 464
Query: 629 YMKELEDFVNRMPFNPTV 646
+ E + MP + V
Sbjct: 465 CLNECRKIFSSMPEHDQV 482
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
K H +++N ++++ N L++ Y + G+ SAR F +M R+ VSW V++GY+
Sbjct: 20 AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMP-LRNCVSWACVVSGYS 78
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ--GKQIHCFVIRNCYEIN 511
R G+ +EA+ +M E + + F + L AC + S+ G+QIH + + Y ++
Sbjct: 79 RNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVD 138
Query: 512 VVCRGALVEVYTKCC-CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
V L+ +Y KC L YA+R F + + + NS+I + R A ++F M+
Sbjct: 139 AVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQ 198
Query: 571 KEGIKPDHITFHGIL-LAC-IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
+G +P TF ++ AC + E +V+L Q +++ K G + L ++ + + G
Sbjct: 199 CDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ-KSGFLTDLFVGSGLVSAFAKSG 257
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW---APFQFKI 685
+ N+M V + + R+ GE A + ++N +P + I
Sbjct: 258 SLIHARKIFNQMETRNAVTLNGLMVGLVRQK----WGEEATKLFMDMNSMIDVSPESYVI 313
Query: 686 TTNRFDRY 693
+ F Y
Sbjct: 314 LLSSFPEY 321
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 287/544 (52%), Gaps = 36/544 (6%)
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+SG+ ++ YA+++ S+ + +L KQ+H ++ G + L + L+ A +
Sbjct: 14 TNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
T AR++FDD+ WN I+R Y + ++A++M+ M + P +FTF + L AC
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S LS G +H + ++ F+ D V L +Y KC RL AR
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR--------------- 174
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++ G +PER ++SW A+++ Y ++ EAL+ MRK
Sbjct: 175 TVFEGLP--------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKP 220
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D V L +LN L ++K G+ +H + + + +L MY KCG + +A+I F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M + + + WNA+++GYA+ G + EA+ F EM + RP + + ++ACA + SL
Sbjct: 281 DKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
EQ + ++ +V R+ Y +V AL++++ KC +E A VF + DV++ ++MI+G+
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R REA+ ++ M++ G+ P+ +TF G+L+AC H G V+ FF+ M + I PQ
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADHKINPQ 458
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY C+I L R G++ + + + MP P V + + C+K+ + LGE+AA++L
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 674 ELNP 677
++P
Sbjct: 519 SIDP 522
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 233/459 (50%), Gaps = 38/459 (8%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S S YA L A+ KA + +++ + L+ FL+ + I G++ AR +F
Sbjct: 20 SDSFYASLID-SATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D++P WNA++ Y++N L ++ +M + VS + T+ ++L++ + L
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRR 218
+ + +H + + GF +V +++ L+ Y KC + AR +F+ + + VSW IV
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G EA+ +F M + D++P + L A + L +G IH ++K+ E +
Sbjct: 197 YAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+L SL MY KCG++ A+ L D+ N+I W +++SGYA +G REA ++F+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V D +++ ++ CA + ++ + +
Sbjct: 317 KDVRP-------------------------------DTISITSAISACAQVGSLEQARSM 345
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ ++ R+DY ++F+S+AL+DM+ KCG++ AR+ F + RD V W+A++ GY G+
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF-DRTLDRDVVVWSAMIVGYGLHGR 404
Query: 459 SEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+ EA++ + M+ P+ TF LL AC + + +G
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 180/367 (49%), Gaps = 9/367 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++ + HL + C+ + R + + + VF+ N I Y KC L AR
Sbjct: 117 PDSFT-FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 99 LFD--EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ +PER SW A++ AY QNG P LE+F M V + + +VL +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCL 235
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+L + +H +VK G L SL Y KC + A+ +FD +++ N + WN ++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G +EA+ MF +M+ +D+RP + +A+ AC+ + S + ++ + + D+
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + +L +M+ KCG +E AR + D+ +R+++ W++++ GY + GR REA L+ M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 337 PER-----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
ER N +++ +L S + +E F LM + Q ++++
Sbjct: 416 -ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGH 474
Query: 392 IKMGKEV 398
+ EV
Sbjct: 475 LDQAYEV 481
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/618 (28%), Positives = 295/618 (47%), Gaps = 38/618 (6%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
LLN +E YGKCG + DAR +F + + SW +L AY QNG LEL M+
Sbjct: 117 LLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLL 176
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTD 196
GV N +T A V+ + +E ++++H +V+L ++L+D Y KC +
Sbjct: 177 GVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFH 236
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD +NK+ N ++ Y+ G +AV F ++ ++P T+A AC+
Sbjct: 237 AEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACAT 296
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ H I D VV +L MY +C
Sbjct: 297 NGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRC------------------------ 332
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
G + +AR +F+ MP +NV++WN M+AGY + EAL M + D+
Sbjct: 333 -------GSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDE 385
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T +L C+ + G+++H + Y S++ V +AL+ MY CG+L A F++
Sbjct: 386 ITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHK 445
Query: 437 -MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
++ +SW A+LT R G+ A+ F +M E R + TF + + AC++I +L
Sbjct: 446 GVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALV 505
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G I VI + I+VV +L+ +Y KC L+YA+ VF S +++ N+++
Sbjct: 506 EGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASS 565
Query: 555 HNERGREAL--EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
N G E L E+ M +G +P+ +T +L C H G V A+ +F SM + ++P
Sbjct: 566 QN--GEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVP 623
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
EHY C++ L R G ++E+E F++ PF+ + + C + G AARR+
Sbjct: 624 TSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRV 683
Query: 673 NELNPWAPFQFKITTNRF 690
L+P + + +N F
Sbjct: 684 LGLDPKNASPYVLLSNMF 701
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 235/524 (44%), Gaps = 46/524 (8%)
Query: 60 EARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
EARK+ + T T V L+ I+ Y KCG++ A +FD+ +D NAM+ AY
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
Q G+ + F + SG+ NQ+TYA + R+ A ++ H + +V
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDV 319
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
++ ++LV Y +C + DARR+FD + KN V+WNV++ Y G EA+ ++ M
Sbjct: 320 VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ P TF N L +CS G IH ++ ++ VL +L MY CG L DA
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439
Query: 299 RGLLDQ--PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + ++ISWT++++ +G R A LF +M V +
Sbjct: 440 VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRA------------- 486
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+ VT ++ C+ + + G + + + ++ + +
Sbjct: 487 ------------------NVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTS 528
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRP 475
L+++Y KCG L A F+ +S ++ V+WN +L ++ G+ + EM + +P
Sbjct: 529 LINLYGKCGRLDYALEVFHYLS-FKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQP 587
Query: 476 SKFTFETLLAACANISSLEQG-KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
++ T +L C++ + + V +C G LV++ + LE +
Sbjct: 588 NEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLE-EVEA 646
Query: 535 FKESS--SLDVIICNSMILGFC--HN--ERG-REALEVFGLMKK 571
F S SLD ++ S+ LG C H+ ERG R A V GL K
Sbjct: 647 FISSKPFSLDSVLWMSL-LGSCVIHSDVERGLRAARRVLGLDPK 689
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 233/526 (44%), Gaps = 40/526 (7%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
Y ++L+ S + L + Q H KR F G+ +L + +V+AYGKC + DAR +F I
Sbjct: 85 AYVSLLKQSGDVTALK-TIQAHISHSKR-FAGDRLLLNCVVEAYGKCGCVKDARLVFSSI 142
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
++ N SW +++ Y G+ K + + +M + P T A + A S L + E
Sbjct: 143 RHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEAR 202
Query: 265 QIHG-VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+IH D V++ +L +MY KCG + A + DQ +++ +++S Y
Sbjct: 203 KIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQL 262
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G +A FN ++ + +QVT L+
Sbjct: 263 GYTVDAVSTFNR-------------------------------IQPSGLQPNQVTYALLF 291
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA + H + ++ V+ AL+ MY +CG+L AR F +M ++
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPG-KNV 350
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
V+WN ++ GYA+ G ++EA+ + M+ P + TF +L +C+ L G+ IH
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKH 410
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGR 560
V+ Y+ ++ AL+ +Y+ C L A+ VF + ++ VI +M+ N GR
Sbjct: 411 VVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGR 470
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL +F M EG++ + +TF + AC G + F+ + G + + +
Sbjct: 471 SALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVT-GHLIDVVLGTSL 529
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
I LY + G + + + + F V I +NG TL +
Sbjct: 530 INLYGKCGRLDYALEVFHYLSFKNIVTW-NTILAASSQNGEETLSD 574
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 168/328 (51%), Gaps = 12/328 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA LF+ CA++ +AR + P V + + Y +CG+L+DAR +FD MP
Sbjct: 287 YALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMP 346
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ +WN M+ Y Q G+ L+L++ M +GV ++IT+ NVL S + L +
Sbjct: 347 GKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRD 406
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRRYLVA 222
+H +V G+ ++ + S+L+ Y C + DA +F + + +SW ++
Sbjct: 407 IHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRN 466
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD--DV 280
G G+ A+ +F KM E +R TF + + ACS + + EG H + ++ G DV
Sbjct: 467 GEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEG---HAIFERVIVTGHLIDV 523
Query: 281 VLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM--- 336
VLG SL +Y KCGRL+ A + +NI++W +I++ + +G + EL EM
Sbjct: 524 VLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLD 583
Query: 337 -PERNVISWNAMLAGYTRSLLWKEALDF 363
+ N ++ ML G + + L +A+ +
Sbjct: 584 GAQPNEMTLLNMLFGCSHNGLVAKAVSY 611
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 283/534 (52%), Gaps = 37/534 (6%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H ++K G N+I + L+D Y KC A ++FD + +N VSW+ ++ +++ G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ K ++ +F +M R+ I P FTF+ L AC L++ +G+QIHG +KI FE V
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY KCGR I EA ++F + +R++IS
Sbjct: 147 SLVDMYSKCGR-------------------------------INEAEKVFRRIVDRSLIS 175
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTT--KDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
WNAM+AG+ + +ALD +M++ + D+ TL +L C+ I GK++HGF
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 402 IHRNDYS--SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ R+ + S+ ++ +L+D+Y KCG L SAR F Q+ ++ +SW++++ GYA+ G+
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWSSLILGYAQEGEF 294
Query: 460 EEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EAM F +Q ++ F +++ A+ + L QGKQ+ ++ + ++
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
V++Y KC ++ A + F E DVI +I G+ + G++++ +F M + I+PD
Sbjct: 355 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
+ + +L AC H G +K + F + +GI P++EHY C++ L R G +KE + ++
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
MP P V + + + CR +G LG+ + L ++ P + + +N + +
Sbjct: 475 TMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 215/426 (50%), Gaps = 41/426 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KC A +FD MPER+ SW+A++ + NG +L LF +M G+
Sbjct: 45 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 104
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N+ T++ L++ LE G+ Q+HG +K GF V + +SLVD Y KC + +A
Sbjct: 105 PNEFTFSTNLKACGLLNALEKGL--QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 162
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI--RPLNFTFANALFACSF 256
++F I +++ +SWN ++ ++ AG G +A+ F M +I RP FT + L ACS
Sbjct: 163 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 222
Query: 257 LSSPYEGMQIHGVIIKIDFE--GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
Y G QIHG +++ F + GSL ++YVKCG L AR DQ E+ +ISW+
Sbjct: 223 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ GYA G EA LF + E N I
Sbjct: 283 SLILGYAQEGEFVEAMGLFKRLQELN-------------------------------SQI 311
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L I+ V A + ++ GK++ + V N+++DMY KCG + A F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M Q +D +SW V+TGY + G ++++ F EM + P + + +L+AC++ +
Sbjct: 372 AEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 494 EQGKQI 499
++G+++
Sbjct: 431 KEGEEL 436
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 40/316 (12%)
Query: 382 ILNVCA--GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
IL VC GLS+ G +VH ++ ++ N+ SN L+DMY KC A F M +
Sbjct: 12 ILRVCTRKGLSD--QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R+ VSW+A+++G+ G + +++ FSEM + P++FTF T L AC +++LE+G Q
Sbjct: 70 -RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH F ++ +E+ V +LV++Y+KC + A +VF+ +I N+MI GF H
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 559 GREALEVFGLMKKEGIK--PDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLE 615
G +AL+ FG+M++ IK PD T +L AC G + Q + R +
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN----------GYATLG 665
++ LY + GY+ F+ RK FD+ ++ GYA G
Sbjct: 249 ITGSLVDLYVKCGYL-----------FSA-----RKAFDQIKEKTMISWSSLILGYAQEG 292
Query: 666 EWAA-----RRLNELN 676
E+ +RL ELN
Sbjct: 293 EFVEAMGLFKRLQELN 308
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
++L C +QG Q+HC+++++ +N++ L+++Y KC A +VF
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+V+ ++++ G N + +L +F M ++GI P+ TF L AC ++ LQ
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ-I 129
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
K G +E ++ +Y + G + E E R+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ +++++ V +LN ++ Y KCG +D+A F EM +D SW ++ Y
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG-LIVKRGFCGNV 178
++G +++ +F +M + +++ Y VL + + + ++L L+ G V
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGN---GKEAVVMFFK 234
+ +VD G+ + +A+ + D + K N W ++ V G+ GKE +
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI--- 507
Query: 235 MLREDIR-PLNFTFANALFA 253
+LR D + P N+ + L+
Sbjct: 508 LLRIDAKNPANYVMMSNLYG 527
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 186/644 (28%), Positives = 309/644 (47%), Gaps = 59/644 (9%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
++L +++ F P + N + YGKCG++D AR +FDE+ RD SWN+M+ A +
Sbjct: 104 GKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACR 163
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE-LGVSKQLHGLIVKRGFCGNVI 179
+ LF M V T +V + + + L + KQ+H +++ G
Sbjct: 164 FEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDW-RTF 222
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
++LV Y K + +A+ +FD +K+ VSWN I+ +EA++ ML+
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHG-VIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+RP T A+ L ACS L G +IH V++ D + V +L +MY C + E
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R + D R I W ++++GY + EA ELF EM +S N+
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNS------------ 390
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
VTL +L C + +H + + + + +V NAL+
Sbjct: 391 ------------------VTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALM 432
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA---------------RRGQSEEAM 463
DMY + G + AR F M+ R+D VSWN ++TGY +RGQ+E +
Sbjct: 433 DMYSRMGRIEIARSIFGSMN-RKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRI 491
Query: 464 TSFSEMQ----WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+F + + + +P+ T T+L CA +++L +GK+IH + ++ +V ALV
Sbjct: 492 NTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALV 551
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-----I 574
++Y KC CL + VF++ S +VI N +I+ + + +G EAL++F M +EG I
Sbjct: 552 DMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREI 611
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+P+ +T+ I + H G V L F +M+ K+GI P +HY C++ L R G ++E
Sbjct: 612 RPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAY 671
Query: 635 DFVNRMPFN-PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + MP N V + C+ + +GE AA+ L L+P
Sbjct: 672 NLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP 715
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 240/503 (47%), Gaps = 60/503 (11%)
Query: 111 WNAMLGAYTQNGFP-GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
W + L + TQ+ + + + +M +GV + + VL+++A +L + KQLH +
Sbjct: 52 WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K G + +SLV+ YGKC + ARR+FD+I N++ VSWN ++ + AV
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 230 VMFFKMLREDIRPLNFTFANALFACS-FLSSPYEGMQIHGVIIKIDFEGD--DVVLGSLT 286
+F ML E++ P +FT + ACS ++ G Q+H +++ GD +L
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLR---NGDWRTFTNNALV 228
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY K GR+ +A+ L D D+++++SW +I+S + + R
Sbjct: 229 TMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR--------------------- 267
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI-HRN 405
++EAL ++ +M ++ + VTL +L C+ L + GKE+H F+ N
Sbjct: 268 ----------FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNN 317
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
D N FV AL+DMY C R+ F M +R V WNA++ GY R EA+
Sbjct: 318 DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAV-WNAMIAGYVRNEFDYEAIEL 376
Query: 466 FSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F EM +E P+ T ++L AC S + IH V++ +E + + AL+++Y+
Sbjct: 377 FVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYS 436
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG---------- 573
+ +E A +F + D++ N+MI G+ R +AL + M++
Sbjct: 437 RMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDD 496
Query: 574 --------IKPDHITFHGILLAC 588
+KP+ +T +L C
Sbjct: 497 YEDNKNFPLKPNSVTLMTVLPGC 519
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 4/218 (1%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D +L AG+ ++ +GK++H + + + V N+L++MY KCG++ +AR F
Sbjct: 84 DNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVF 143
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN-ISS 492
+++ RD VSWN+++ R + E A+ F M E P+ FT ++ AC+N I+
Sbjct: 144 DEITN-RDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLING 202
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GKQ+H FV+RN + ALV +Y K + A +F D++ N++I
Sbjct: 203 LLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISS 261
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
N+R EAL +M + G++P+ +T +L AC H
Sbjct: 262 LSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSH 299
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 52/392 (13%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S +L + + C ++ ++ + S +V + ++ N ++ Y + G ++ AR
Sbjct: 388 PNSVTL-SSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARS 446
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG------------------VS 140
+F M +D SWN M+ Y G L L DM +
Sbjct: 447 IFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLK 506
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N +T VL A LG K++H VK+ +V + S+LVD Y KC + +R +
Sbjct: 507 PNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTV 566
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-----DIRPLNFTFANALFACS 255
F+ + +N ++WNV++ Y + G G+EA+ +F +M+ E +IRP T+ + S
Sbjct: 567 FEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLS 626
Query: 256 FLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ--PDERNIIS 312
EG+ + + + K E L ++ + G++E+A L+ + + + +
Sbjct: 627 HSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDA 686
Query: 313 WTSIVSGYAISGRIREARELFNEMPERN--VISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
W+S++ I + E+ +N V+ N + G +S+L ++ + +
Sbjct: 687 WSSLLGACKIHQNLE-----IGEIAAKNLFVLDPNVLDYGTKQSMLGRKMKE-----KGV 736
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
K+ G S I+ G EVH F+
Sbjct: 737 RKE-------------PGCSWIEHGDEVHKFL 755
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 171/600 (28%), Positives = 297/600 (49%), Gaps = 61/600 (10%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N AI Y + G ++A +F MP S+N M+ Y +NG +LF +M +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL- 126
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+++ +++ LG +++L ++ +R C ++++ Y + + DAR +
Sbjct: 127 ---VSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGYAQNGCVDDARSV 179
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + KN VSWN ++ Y+ +EA ++F + N + + +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 261 --YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
++ M + V+ + ++ G Y + G++++AR L D+ +++ +WT++VS
Sbjct: 240 QFFDSMNVRDVV-----SWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY + + EARELF++MPERN +SWNAMLAGY +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG------------------------ 325
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
++M KE+ + N+ N ++ Y +CG + A+ F +M
Sbjct: 326 -----------ERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
+RD VSW A++ GY++ G S EA+ F +M+ E R ++ +F + L+ CA++ +LE GK
Sbjct: 371 -KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK 429
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H +++ YE AL+ +Y KC +E A +FKE + D++ N+MI G+ +
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
G AL F MK+EG+KPD T +L AC H G V Q+F +M YG++P +HY
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ L R G +++ + + MPF P + + R +G L E AA ++ + P
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 215/434 (49%), Gaps = 53/434 (12%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V N + Y + G +DDAR +FD MPE++ SWNA+L AY QN
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN------ 201
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
+++ A +L S E L L G VK+
Sbjct: 202 --------------SKMEEACMLFKSRENWALVSWNCLLGGFVKK--------------- 232
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
+ +AR+ FD + ++ VSWN I+ Y +G EA +F D P+ F
Sbjct: 233 ----KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF------DESPVQDVF 282
Query: 248 ANALFACSFLSSPY--EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
++ + E ++ + E ++V ++ YV+ R+E A+ L D
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN+ +W ++++GYA G+I EA+ LF++MP+R+ +SW AM+AGY++S EAL
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M + +++ + L+ CA + +++GK++HG + + Y + FV NALL MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLL 484
++ A F +M+ +D VSWN ++ GY+R G E A+ F M+ E +P T +L
Sbjct: 459 SIEEANDLFKEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 485 AACANISSLEQGKQ 498
+AC++ +++G+Q
Sbjct: 518 SACSHTGLVDKGRQ 531
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 6/285 (2%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
E ++ L P V N I Y +CG + +A+ LFD+MP+RD SW AM+ Y+
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+G L LF+ M G N+ ++++ L + A+ + L + KQLHG +VK G+
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ ++L+ Y KC + +A +F ++ K+ VSWN ++ Y G G+ A+ F M RE
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
++P + T L ACS +G Q + + + + ++ + G LEDA
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 299 RGLL-DQPDERNIISWTSIVSGYAISGRIR----EARELFNEMPE 338
L+ + P E + W +++ + G A ++F PE
Sbjct: 566 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 610
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 271/534 (50%), Gaps = 34/534 (6%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
Y +L+ E +L +H I++ GF N+ L + L+ Y K +AR++FD +
Sbjct: 40 YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N VSW + Y G+ ++A+++F +M R +R FT+ + L AC+ L GMQ
Sbjct: 100 ERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQ 159
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IHG I K F G+ V +L +++ KCG +EDA
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDA--------------------------- 192
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
R LF M ER+V+SWNA++ GY ++ + M D TLG +L
Sbjct: 193 ----RYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKA 248
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+ + + ++HG I + + S+I ++ +L+D Y K ++SA + M ++D +S
Sbjct: 249 SSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSM-LKKDVIS 307
Query: 446 WNAVLTGYARR-GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+ A++TGYAR+ S EA+ F +MQ TF T+L CA+I+SL G+QIH
Sbjct: 308 FTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALA 367
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
I+ +V ALV++Y K +E A R F E +VI S+I G+ + G EA+
Sbjct: 368 IKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAI 427
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++ M+ EG+KP+ ITF +L AC H G + F++M KY I+P+ EHY CMI L
Sbjct: 428 ALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDL 487
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R G ++E + + +M P + I C G+ +LGE AA L ++P
Sbjct: 488 FARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDP 541
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/559 (29%), Positives = 274/559 (49%), Gaps = 65/559 (11%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
+S SLY + QLC ++ + + + S+++ + L + I Y K G +AR +
Sbjct: 35 LSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKV 94
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD MPER+ SW A + Y +NG L +F M +GV ANQ TY +VLR+ L
Sbjct: 95 FDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCL 154
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
Q+HG I K F GN+ ++S+LVD + KC M DAR +F+ + ++ VSWN ++ Y
Sbjct: 155 ERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGY 214
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
++ MF+ M+ E + P FT + L A S ++ + QIHG+II++ F
Sbjct: 215 AAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHI 274
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+ GSL + Y K ++ A L ++++IS+T+I++GYA
Sbjct: 275 DLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARK---------------- 318
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
Y+R EALD M+ +ID VT +LNVCA ++ + +G+++H
Sbjct: 319 ---------CSYSR-----EALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIH 364
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S ++ NAL+DMY K G + A FY+M + ++ +SW +++TGY + G
Sbjct: 365 ALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKE-KNVISWTSLITGYGKHGYG 423
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EA+ + +M++E +P+ TF +LL AC++ S G+ CF N++ + +
Sbjct: 424 HEAIALYKKMEYEGLKPNDITFLSLLFACSH--SGLTGEGWECFN-------NMITKYNI 474
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ C+ I +F RG + E + ++ K IKP+
Sbjct: 475 LPRAEHYSCM---IDLFA---------------------RGGQLEEAYNMICKMNIKPNS 510
Query: 579 ITFHGILLACIHEGNVKLA 597
+ IL AC G++ L
Sbjct: 511 SLWGAILGACSIYGHMSLG 529
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
T S + +L C L+QG IH +IRN ++ N+ L+ Y K A
Sbjct: 33 THLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINAR 92
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+VF +V+ + I G+ N ++AL VF M + G++ + T+ +L AC
Sbjct: 93 KVFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRAC 148
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 180/621 (28%), Positives = 294/621 (47%), Gaps = 51/621 (8%)
Query: 76 PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG----FPGRTLEL- 130
P + A + G D R + D +WN QNG P R L++
Sbjct: 5 PSVAVPVAASGFPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVG 64
Query: 131 -FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+ M G + Y +L E LG ++ LHG +VK G ++ + +SLV+AY
Sbjct: 65 EAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYM 124
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
+C DAR +FD + KN V+W ++ Y V EA+ +F +ML P ++T
Sbjct: 125 RCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGA 184
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L ACS ++ G Q+HG IK + SL MY K G LE
Sbjct: 185 MLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLE------------- 231
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL-MR 368
A F +P++NVI+W M++ + E +FL M
Sbjct: 232 ------------------SAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDML 273
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
++ TL ++++C ++ +GK+V F + +NI V N+ + +Y + G
Sbjct: 274 MDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETD 333
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYAR-----------RGQSEEAMTSFSEMQWET-RPS 476
A +F +M ++WNA+++GYA+ R + +A+ F ++ +P
Sbjct: 334 EAMRFFEEMDDV-SIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPD 392
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
FTF ++L+ C+++ +LEQG+QIH I+ + +VV ALV +Y KC C+E A + F
Sbjct: 393 LFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFV 452
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
E S ++ SMI G+ + R +EA+++F M+ G++P+ ITF +L AC + G +
Sbjct: 453 EMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEK 512
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
A +FD M+ +Y I P ++HY CM+ ++ R G + + F+ R F P + + C
Sbjct: 513 AEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGC 572
Query: 657 RKNGYATLGEWAARRLNELNP 677
R +G L +AA RL EL P
Sbjct: 573 RSHGNMELAFYAADRLIELRP 593
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/574 (23%), Positives = 270/574 (47%), Gaps = 58/574 (10%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ + V ++Y L +C + ++ AR L ++V + +F+ + Y +CG
Sbjct: 70 LREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGAS 129
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
DAR LFD+MPE++ +W A++ YT N LE+F++M +G + T +L +
Sbjct: 130 QDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNAC 189
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+ + Q+HG +K + +SL Y K + A R F + +KN ++W
Sbjct: 190 SASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWT 249
Query: 214 VIVRRYLVAGNGKE-AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ N E + +F ML + + P FT + + C G Q+ K
Sbjct: 250 TMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFK 309
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
I + + V S +Y++ G ++A ++ D+ +II+W +++SGYA
Sbjct: 310 IGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYA----------- 358
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
++ E +A G+ +AL ++++ D T IL+VC+ + +
Sbjct: 359 --QIMETAKDDLHARSRGF-------QALKVFRNLKRSAMKPDLFTFSSILSVCSSMMAL 409
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G+++H + + S++ V++AL++MY KCG + A F +MS R V+W ++++G
Sbjct: 410 EQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSI-RTLVTWTSMISG 468
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEI 510
Y++ G+ +EA+ F +M++ RP++ TF +L+AC+ E+ + H F +++ Y+I
Sbjct: 469 YSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAE--HYFDMMKEEYKI 526
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+V+ Y C ++ +R+ + LD + F ++
Sbjct: 527 E-----PIVDHYG--CMVDMFVRLGR----LD---------------------DAFAFIR 554
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ G +P+ + ++ C GN++LA D +
Sbjct: 555 RTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRL 588
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 303/655 (46%), Gaps = 78/655 (11%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ES L+T + + N + YGKCG+L AR +FD M RD SWNA++ AY Q G
Sbjct: 33 IESGLLT-----QISVGNALVNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGH 87
Query: 124 PGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILE 181
+ELF M G + + +T+ V+ + + L ++ L+ +RG +V+L
Sbjct: 88 CKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLG 147
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR---- 237
++LV+ Y KC + A +F+ ++ ++ VSWN I+ L + K+ + F+ ++
Sbjct: 148 NALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIIS-ALARHDRKDIAMQRFREMQLEGL 206
Query: 238 ----EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
E + P FT A+AL AC+ EG +IH ++I+ E + VV +L MY C
Sbjct: 207 SPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANC- 265
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
G +++A E F +M +RNV+SWNAM+A Y
Sbjct: 266 ------------------------------GTLQDALECFQKMAQRNVVSWNAMIAAYVH 295
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
KEA M+ + VT L+ C+ + + G ++H + + ++ V
Sbjct: 296 HNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASV 355
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQR------------------------------RDK 443
NA++ M+ KC +L A F ++ Q+ RD
Sbjct: 356 GNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDV 415
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
++WN +L Y R ++EA+ F M E T+ + T+ T+L ACA + L +G++IH
Sbjct: 416 ITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHEL 475
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+ + + ALV+++ KC L A + F+ D N ++ N EA
Sbjct: 476 IGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEA 535
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L+ F M++EGIKP +TF + AC H G ++ A F S+R YGI P HY M
Sbjct: 536 LKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTD 595
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G++ E E+ + R+PF+ + C+ +G G A ++ NP
Sbjct: 596 LLGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLRWNP 650
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 236/471 (50%), Gaps = 34/471 (7%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ + +++ L+S L K +H L+++ G + + ++LV+ YGKC + A
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACS 255
R +FD + +++ +SWN ++ Y AG+ KEA+ + F+ ++ED I P + TF + AC
Sbjct: 61 REVFDGMDHRDVISWNAVITAYAQAGHCKEAMEL-FQAMQEDGRIEPDSVTFVAVVSACC 119
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S+ G +I ++ + DVVLG +L MY KCG L+ A + ++ R+++SW
Sbjct: 120 DPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWN 179
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+I+S A R A + F EM L G + +EAL
Sbjct: 180 AIISALARHDRKDIAMQRFREM----------QLEGLSPK---EEAL-----------LP 215
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D TL L C G ++ G+E+H + S + V NAL+ MY CG L+ A F
Sbjct: 216 DGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECF 275
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M+Q R+ VSWNA++ Y +EA F +MQ E +P+ TF T L+AC+ ++
Sbjct: 276 QKMAQ-RNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAF 334
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E G Q+H V + E + A+V ++ KC L+ A+ F+ ++ N ++ +
Sbjct: 335 EDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAY 394
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
H R EA ++F +M++ D IT++ IL A + K A++ F M
Sbjct: 395 IHVGRLAEARKLFEVMEER----DVITWNMILGAYVEREMAKEAVRLFRRM 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P +F T L +C I SL GK IH VI + + ALV +Y KC L A V
Sbjct: 4 PDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREV 63
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLACIHEGN 593
F DVI N++I + +EA+E+F M+++G I+PD +TF ++ AC
Sbjct: 64 FDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSA 123
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ + F + + + + ++ +Y + G +K RM V
Sbjct: 124 LEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVV 176
>gi|119638460|gb|ABL85051.1| hypothetical protein 57h21.26 [Brachypodium sylvaticum]
Length = 753
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 196/696 (28%), Positives = 316/696 (45%), Gaps = 113/696 (16%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
NR + + + G D AR +FD MP RD SWN+ + A+ ++G LFL++ GV
Sbjct: 29 NRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLFLELRRRGVR 88
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT--- 195
+ + + VL + A E LELG + +HGL ++ GNV + +SLV Y C V+
Sbjct: 89 PDGTSLSTVLSACARLEALELG--RCVHGLALRSCSTGNVFVGASLVTMYASCGVVDCLE 146
Query: 196 ----------------------------DARRMFDDIQNKNAVSWNVIVRRY-------- 219
DARR+F+ + +N VSW +V+ +
Sbjct: 147 RVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVKGHVSVHDVGQ 206
Query: 220 ------------------LVAG-----NGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
++ G +EAV +F ++R N + A +
Sbjct: 207 AVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVVNAYAG 266
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG +K F D ++ SL MY +++AR D+ D + + SW +I
Sbjct: 267 LKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDRKQVGSWNAI 326
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GY + +I EA +F M R+ +SWN+M+ GY R +A + M + K+++
Sbjct: 327 IRGYIYAEKIDEAENIFESMTYRDKVSWNSMINGYIRDGRIADATELYSKMPE--KNVEA 384
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS---SNIFVSNALLDMYRKCGNLRSARIW 433
T + + G K+GK F YS ++ ALL Y K G L A
Sbjct: 385 ATALMSWFIDNG----KLGKARDMF-----YSLPQVDVMSCTALLFGYMKEGYLDDALDL 435
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE------------------------- 468
F++M +R V++N ++ G+ +G+ EA F+E
Sbjct: 436 FHRM-HKRTAVTYNVMIAGFLHQGKVAEAYKLFNESPAHDATTCSCFVTGLAQNGLIHDA 494
Query: 469 -------MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ S+ +L++ C++ S + G Q+H I+ +E+ ++ + +L+ +
Sbjct: 495 LKLYKKMLVSNMHTSESVVSSLISCCSHHSMIVHGLQLHATTIKLGFELYLIIQNSLISL 554
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y+KC + A +F + DV+ N++I G+ N G+ A+E+F MK + PD ITF
Sbjct: 555 YSKCGEMVAAQNIFDQMVKRDVVTWNTLIHGYAFNSLGQNAIEMFKNMKIAQVDPDEITF 614
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G+L AC H ++ A FFD M C YGI P + HY CM+ L CR G ++E E + MP
Sbjct: 615 LGVLSACNHMSLLEEAKHFFDVMTCDYGIAPNMMHYACMVDLLCRRGMVEEAEGLMKSMP 674
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F P + + CR +G L E AA +L +NP
Sbjct: 675 FEPDSAIWTSLLSSCRLSGSDKLAEHAASQLIAINP 710
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 211/458 (46%), Gaps = 43/458 (9%)
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
G V+ + L+ A+ + AR +FD + ++ VSWN + + +G A +F ++
Sbjct: 23 GGVVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGLFLEL 82
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
R +RP + + L AC+ L + G +HG+ ++ G+ V SL MY CG +
Sbjct: 83 RRRGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMYASCGVV 142
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT--- 352
+ + D D N+ W ++VSG ++ R+ +AR +FN MP RNV+SW AM+ G+
Sbjct: 143 DCLERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPARNVVSWTAMVKGHVSVH 202
Query: 353 ---------------RSLLW-------------KEALDFVFLMRKTTKDIDQVTLGLILN 384
S+ W +EA++ + + ++ V L ++N
Sbjct: 203 DVGQAVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVILVKVVN 262
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
AGL I G+ +HGF ++ + ++ + +L+ MY ++ AR+ F +M R+
Sbjct: 263 AYAGLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKM-DRKQVG 321
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
SWNA++ GY + +EA F M + K ++ +++ + +++
Sbjct: 322 SWNAIIRGYIYAEKIDEAENIFESMTYR---DKVSWNSMINGYIRDGRIADATELY---- 374
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
E NV AL+ + L A +F +DV+ C +++ G+ +AL+
Sbjct: 375 SKMPEKNVEAATALMSWFIDNGKLGKARDMFYSLPQVDVMSCTALLFGYMKEGYLDDALD 434
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+F M K +T++ ++ +H+G V A + F+
Sbjct: 435 LFHRMHKRTA----VTYNVMIAGFLHQGKVAEAYKLFN 468
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 174/426 (40%), Gaps = 94/426 (22%)
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ D+ ++S ++ + +GR ARE+F+ MP R+V+SWN+ ++ + RS A
Sbjct: 19 EDDDGGVVSGNRLMGAHLRAGRPDAAREVFDGMPRRDVVSWNSAMSAHARSGAHAGAAGL 78
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+R+ D +L +L+ CA L +++G+ VHG R+ + N+FV +L+ MY
Sbjct: 79 FLELRRRGVRPDGTSLSTVLSACARLEALELGRCVHGLALRSCSTGNVFVGASLVTMYAS 138
Query: 424 CG-------------------------------NLRSARIWFYQMSQRRDKVSWNAVLTG 452
CG + AR F +M R+ VSW A++ G
Sbjct: 139 CGVVDCLERVFDDVDSPNVALWNALVSGLVMNHRVGDARRVFNRMPA-RNVVSWTAMVKG 197
Query: 453 YARRGQSEEAMTSFSEM------QW-----------ETRPSKFTFETLL----------- 484
+ +A+ F+ M W + R + F +L+
Sbjct: 198 HVSVHDVGQAVELFNLMPVKNSVSWCVMIGGLVHCQQFREAVELFNSLMRNGDEVTNVIL 257
Query: 485 ----AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
A A + S+ G+ IH F +++ + +++ +LV +Y ++ A F +
Sbjct: 258 VKVVNAYAGLKSIGGGRCIHGFSVKSGFVHDLIIEASLVAMYCNSLDIDEARLEFDKMDR 317
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
V N++I G+ + E+ EA +F M D ++++ ++ I +G + A +
Sbjct: 318 KQVGSWNAIIRGYIYAEKIDEAENIFESMTYR----DKVSWNSMINGYIRDGRIADATEL 373
Query: 601 FDSM------------------------RCKYGIIPQLEHYECMIKL--YCRYGYMKELE 634
+ M R + +PQ++ C L Y + GY+ +
Sbjct: 374 YSKMPEKNVEAATALMSWFIDNGKLGKARDMFYSLPQVDVMSCTALLFGYMKEGYLDDAL 433
Query: 635 DFVNRM 640
D +RM
Sbjct: 434 DLFHRM 439
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 276/540 (51%), Gaps = 48/540 (8%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++K G + S LV+ Y KC VM +AR++FD++ +N V W ++ Y+
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ AV +F ML P NFT + AL ACS L S G Q H IIK D + +
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +Y K G L+ + + E+++ISWT+I+S +GR LF EM NV
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENV--- 178
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
E DF TL +L++C+ + +G +VH +
Sbjct: 179 --------------EPNDF--------------TLTSVLSLCSTIQSSDLGMQVHSLSTK 210
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ SN+ ++N+L+ +Y KCG + A+ F +M + ++ ++WNA++ G+A+ + A
Sbjct: 211 LGHESNLRITNSLVYLYLKCGCIDEAKNLFNRM-EYKNLITWNAMIAGHAQ--AMDLAKD 267
Query: 465 SFSEMQWET--------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+FS Q T +P FT ++L C+ +++LEQG+QIH I++ +
Sbjct: 268 NFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLS 327
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+VV ALV++Y KC +E A + F + S+ +I SMI F + + + AL++F M+
Sbjct: 328 DVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMR 387
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
G +P+ ITF G+L AC H G V AL++F+ M+ +Y I P ++HY C++ ++ R G +
Sbjct: 388 LAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRL 447
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
E D + RM P + + CR +G LG +AA +L +L P + + + N +
Sbjct: 448 DEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMY 507
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 263/514 (51%), Gaps = 30/514 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+++ + Y KCG + +AR +FD +P R+ W ++ Y QN P +E+F DM S
Sbjct: 16 FVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLES 75
Query: 138 GVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
G + T + L SS E + LG KQ H I+K + + ++L Y K +
Sbjct: 76 GSFPSNFTLSIALNACSSLESITLG--KQFHAFIIKYRISHDSSIGNALCSLYSKFGSLD 133
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+ + F + K+ +SW I+ G + +F +ML E++ P +FT + L CS
Sbjct: 134 SSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCS 193
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ S GMQ+H + K+ E + + SL +Y+KCG +++A+ L ++ + +N+I+W +
Sbjct: 194 TIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNA 253
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++G+A +A +L + +++A G EAL + ++ + D
Sbjct: 254 MIAGHA------QAMDLAKD-------NFSAQQTG-------TEALGMYLKLNRSGRKPD 293
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL IL VC+ L+ ++ G+++H ++ + S++ V AL+DMY KCG++ AR F
Sbjct: 294 LFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFL 353
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
MS R +SW +++T +AR GQS+ A+ F +M+ RP++ TF +LAAC++ ++
Sbjct: 354 DMSTRT-LISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVD 412
Query: 495 QGKQIHCFVIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+ + + +++ Y+I V G LV+++ + L+ A V K +++
Sbjct: 413 EALE-YFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIA 471
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
C N G E L + + +KP + +LL
Sbjct: 472 GCRN-HGNEELGFYAAEQLLKLKPRSTETYVVLL 504
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 209/428 (48%), Gaps = 33/428 (7%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
SG S+ +S +L A C+S ++I ++ + ++ + + + N Y K
Sbjct: 75 SGSFPSNFTLSIALNA-----CSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKF 129
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G+LD + F E E+D SW ++ A NG G L LF++M V N T +VL
Sbjct: 130 GSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVL 189
Query: 151 R--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
S+ + +LG+ Q+H L K G N+ + +SLV Y KC + +A+ +F+ ++ KN
Sbjct: 190 SLCSTIQSSDLGM--QVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKN 247
Query: 209 AVSWNVIVRRYLVAGN-----------GKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++WN ++ + A + G EA+ M+ K+ R +P FT ++ L CS L
Sbjct: 248 LITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRL 307
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
++ +G QIH IK F D VV +L +MY KCG +E AR R +ISWTS++
Sbjct: 308 AALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMI 367
Query: 318 SGYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+ +A G+ + A +LF +M N I++ +LA + + + EAL++ +M+K K
Sbjct: 368 TSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYK- 426
Query: 374 IDQVT--LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
I V G ++++ L + E I R D N F+ L+ R GN
Sbjct: 427 IKPVMDHYGCLVDMFVRLGRL---DEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN---EE 480
Query: 432 IWFYQMSQ 439
+ FY Q
Sbjct: 481 LGFYAAEQ 488
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 191/669 (28%), Positives = 316/669 (47%), Gaps = 65/669 (9%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L ++ ++ ++ + + CA + K+ ++ F+ + YG+ G L
Sbjct: 91 LCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCL 150
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
DAR +FD++P RD SW++++ +Y G LE+F + + V + + +V +
Sbjct: 151 TDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEAC 210
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
++ L ++K +HG IV+R L++SL++ Y C + A R+F ++ NK +SW
Sbjct: 211 SKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWT 270
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y +G KEA +F KML + P T L +CS LS EG IH +K
Sbjct: 271 SMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKK 330
Query: 274 DFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
D LG L E+Y CG+L +L ERN++SW +++S A G EA L
Sbjct: 331 GMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVL 390
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F +M +R ++ LDF +L ++ C + +
Sbjct: 391 FVQMQKRGLM------------------LDF-------------FSLSSAISACGNVGSL 419
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
++G+++HG+ + FV NAL+ MY +CG SA + F + Q + V+WN++++G
Sbjct: 420 QLGRQIHGYAIKRCILGE-FVKNALIGMYSRCGFSDSAYMIFNDIKQ-KSSVAWNSIISG 477
Query: 453 YARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+ + G S EA+ +M + + F + + ACA++ LE+GK +H +I E +
Sbjct: 478 FVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKD 537
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+ AL ++Y KC L A VF S V+ ++MI G+ + R A+ F M +
Sbjct: 538 LYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVE 597
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
GIKP+HITF IL AC H G+V+ +FD MR +G+ P EH+ C++ L R G +
Sbjct: 598 LGIKPNHITFMNILSACSHSGSVEQGKFYFDLMR-DFGVEPSSEHFACLVDLLSRAGDVN 656
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCR-----------------------------KNGYA 662
+N MPF +L + + CR N YA
Sbjct: 657 GAYKIINSMPFPADASVLGNLLNGCRIHQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYA 716
Query: 663 TLGEWAARR 671
+G WAAR
Sbjct: 717 EIGNWAARE 725
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 252/546 (46%), Gaps = 38/546 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y LF+ C K + + +L ++L + + IE Y + G++ + +F+
Sbjct: 4 YMPLFRSC---KTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQ 60
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
D W ++ + + + L+ M + + +VLR+ A ++ + +
Sbjct: 61 NPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAK 120
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG I+K GF + +E+SL+ YG+ +TDAR++FDDI ++ VSW+ I+ Y+ G
Sbjct: 121 VHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGE 180
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA+ MF ++ E ++ + ACS L IHG I++ + + + S
Sbjct: 181 ANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNS 240
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L EMY C L A + + ISWTS++ Y SG +EA E+F +M E V
Sbjct: 241 LIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKV--- 297
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+ + +T+ +L C+GLS ++ GK +H + +
Sbjct: 298 ----------------------------EPNVITIMGVLKSCSGLSWLREGKLIHCYALK 329
Query: 405 NDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + + L+++Y CG L + + R+ VSWN +L+ AR+G EEA+
Sbjct: 330 KGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGE-RNVVSWNTLLSINARQGLFEEAL 388
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +MQ F+ + ++AC N+ SL+ G+QIH + I+ C + + AL+ +Y
Sbjct: 389 VLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCI-LGEFVKNALIGMY 447
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
++C + A +F + + NS+I GF + EA+ + M +K + F
Sbjct: 448 SRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFL 507
Query: 583 GILLAC 588
+ AC
Sbjct: 508 SAIQAC 513
>gi|302788029|ref|XP_002975784.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
gi|300156785|gb|EFJ23413.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
Length = 590
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/549 (29%), Positives = 289/549 (52%), Gaps = 24/549 (4%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M +++ SW+ M+GAY QNG LF M G+ N +T +VL + + + EL
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++H I F ++ L++SLV+ Y KC + AR++F+ ++ K+ +SW+ ++ Y +
Sbjct: 61 KKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQS 120
Query: 223 GNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G EA+ ++ M E + P TF + AC+ G Q+HG ++ + E D V
Sbjct: 121 GRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVAV 180
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP-ERN 340
+L ++YVKCG LEDA+ D+ ++R+++ W ++S Y+ G ++ E ++ M E N
Sbjct: 181 GSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAMDVEPN 240
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL---------ILNVCAGLSE 391
++ YT L+ A++ + +K I V+ GL +L++
Sbjct: 241 AVT-------YTNVLIACSAMEDLAQGQKVHSRI--VSSGLETDMTMETSLLSLYIKCRS 291
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVL 450
+K +V + + D +++ ALL+MY CGNL +A R++ + +RRD V W A++
Sbjct: 292 LKSACQVFEAMGKKD--TDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMI 349
Query: 451 TGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
YA+ G+ EEA+ + M E +P+ T+ ++L+AC+++ ++ +G++IH + E
Sbjct: 350 ASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEE 409
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
++V + +L+ +Y +C L A F + + DV M+ F H+ ALE+ M
Sbjct: 410 LDVAVQNSLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREM 469
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ G+ PD +TF +L AC HEG+++ F SM Y + P +HY CM+ L R G
Sbjct: 470 ELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGR 529
Query: 630 MKELEDFVN 638
+ E + +
Sbjct: 530 LAEAREVIQ 538
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 233/456 (51%), Gaps = 10/456 (2%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
H+ C+ + +K+ + + + L + Y KCGNL+ AR +F+ + +
Sbjct: 46 HVLGACSCQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERK 105
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQL 165
D SW+ M+ AY Q+G +E++ M + + V N +T+ V+ + ++ +Q+
Sbjct: 106 DVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQV 165
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG +V G +V + S+LV Y KC + DA++ FD ++ ++ + WN ++ Y G+
Sbjct: 166 HGRLVSLGLETDVAVGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSP 225
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++ + + M D+ P T+ N L ACS + +G ++H I+ E D + SL
Sbjct: 226 QQVIEAYDAM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSL 282
Query: 286 TEMYVKCGRLEDARGLLDQPDER--NIISWTSIVSGYAISGRIREARELFNEMPE--RNV 341
+Y+KC L+ A + + ++ ++++ T++++ YA G + A+ +F + R+V
Sbjct: 283 LSLYIKCRSLKSACQVFEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDV 342
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ W AM+A Y ++ +EAL M + VT +L+ C+ L I G+++H
Sbjct: 343 VFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSS 402
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ V N+LL +Y +CG+LR A F ++ RD SW ++ +A G S
Sbjct: 403 LEGKAEELDVAVQNSLLSLYARCGSLRDAWSCFAKI-HNRDVFSWTGMVAAFAHHGHSAR 461
Query: 462 AMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQG 496
A+ EM+ P TF+++L AC++ SLE+G
Sbjct: 462 ALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG 497
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + C+S I+E RK+ S+L V + N + Y +CG+L DA F ++
Sbjct: 380 YTSVLSACSSLGNILEGRKIHSSLEGKAEELDVAVQNSLLSLYARCGSLRDAWSCFAKIH 439
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
RD SW M+ A+ +G R LEL +M GVS + +T+ +VL + + E L
Sbjct: 440 NRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSL 494
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 174/617 (28%), Positives = 298/617 (48%), Gaps = 47/617 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N + YG G + DA LFD MPER+ SWN+M+ ++ NG G +
Sbjct: 222 LFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFM-------- 273
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ T VL A E E+GV K +HG VK +++ ++L+D Y K + D
Sbjct: 274 ----PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID 329
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML--REDIRPLNFTFANALFAC 254
++ +F NKN VSWN +V + G+ + +ML ED++ T NA+ C
Sbjct: 330 SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S ++H +K +F D+++ + Y KCG L
Sbjct: 390 FDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLS------------------ 431
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
A+ +F+ + + + SWNA++ GY +S + +LD M+ +
Sbjct: 432 -------------YAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLP 478
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D T+ +L+ C+ L +++GKEVHGFI RN ++FV ++L +Y CG L + ++ F
Sbjct: 479 DNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLF 538
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSL 493
M + VSWN V+TG+ + G E A+ F +M + +P + T+ AC+ + SL
Sbjct: 539 DAM-EDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSL 597
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G++ H + +++ E N +++++Y K + + +VF N+MI+G+
Sbjct: 598 RLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGY 657
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R +EA+++F M++ G PD +TF G+L AC H G + L++ D M+ +G+ P
Sbjct: 658 GMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPN 717
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
L+HY C+I + R G + M P V + + CR + +GE A +L
Sbjct: 718 LKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLF 777
Query: 674 ELNPWAPFQFKITTNRF 690
L P P + + +N +
Sbjct: 778 VLEPEKPENYVLLSNLY 794
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 251/514 (48%), Gaps = 48/514 (9%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHS 137
L R I Y CG+ DD+R FD + ++ WNA++ +Y++N LE+F+ M + +
Sbjct: 122 LCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKT 181
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + T+ V+++ A ++G+ +HGL+VK G ++ + ++LV YG ++DA
Sbjct: 182 HLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDA 241
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++FD + +N VSWN ++R + + NG + M P T L C+
Sbjct: 242 LKLFDIMPERNLVSWNSMIRVF--SDNGDDGAFM----------PDVATVVTVLPVCARE 289
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +HG +K+ + + VV +L +MY K G + D++ + + +N++SW ++V
Sbjct: 290 REIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMV 349
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--D 375
G++ G I +L + MLAG ++D+ D
Sbjct: 350 GGFSAEGDIHGTFDLLRQ-----------MLAG--------------------SEDVKAD 378
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+VT+ + VC S + KE+H + + ++ + ++NA + Y KCG+L A+ F+
Sbjct: 379 EVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFH 438
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+ + SWNA++ GYA+ ++ + +M+ P FT +LL+AC+ + SL
Sbjct: 439 GIRSKTLN-SWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLR 497
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK++H F+IRN E ++ +++ +Y C L +F ++ N++I G
Sbjct: 498 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHL 557
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N AL +F M GI+P I+ + AC
Sbjct: 558 QNGFPERALGLFRQMVLYGIQPCGISMMTVFGAC 591
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 203/445 (45%), Gaps = 49/445 (11%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L++S + ++ + +++H L+ + +L + ++ Y C D+R FD +++K
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQI 266
N WN ++ Y E + MF KM+ + + P NFTF + AC+ +S G+ +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+++K D V +L Y G + DA L D ERN++SW S++ ++ +G
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD- 268
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
D F+ D T+ +L VC
Sbjct: 269 -----------------------------------DGAFMP-------DVATVVTVLPVC 286
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A EI +GK VHG+ + + V+NAL+DMY K G + +++ F +++ ++ VSW
Sbjct: 287 AREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIF-KLNNNKNVVSW 345
Query: 447 NAVLTGYARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
N ++ G++ G +M + + + T + C + S L K++HC+
Sbjct: 346 NTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYS 405
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ + + + A V Y KC L YA RVF S + N++I G+ + R +L
Sbjct: 406 LKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSL 465
Query: 564 EVFGLMKKEGIKPDHITFHGILLAC 588
+ MK G+ PD+ T +L AC
Sbjct: 466 DAHLQMKNSGLLPDNFTVCSLLSAC 490
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 140/281 (49%), Gaps = 15/281 (5%)
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTK 372
T I++ YA+ G ++R F+ + +N+ WNA+++ Y+R+ L+ E L+ F+ ++ KT
Sbjct: 124 TRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHL 183
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D T ++ CAG+S++ +G VHG + + ++FV NAL+ Y G + A
Sbjct: 184 LPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALK 243
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
F M + R+ VSWN+++ ++ G M P T T+L CA
Sbjct: 244 LFDIMPE-RNLVSWNSMIRVFSDNGDDGAFM-----------PDVATVVTVLPVCARERE 291
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+ GK +H + ++ + +V AL+++Y+K C+ + +FK +++ +V+ N+M+ G
Sbjct: 292 IGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGG 351
Query: 553 FCHNERGREALEVFGLM--KKEGIKPDHITFHGILLACIHE 591
F ++ M E +K D +T + C E
Sbjct: 352 FSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDE 392
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 209/479 (43%), Gaps = 62/479 (12%)
Query: 23 SKTLTK---TISGHLKSDEPVSYSLYAHL-----------------FQLCASSKAIVEAR 62
SKTL I G+ +S +P SL AHL C+ K++ +
Sbjct: 442 SKTLNSWNALIGGYAQSSDP-RLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGK 500
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
++ ++ + +F+ + Y CG L + LFD M + SWN ++ + QNG
Sbjct: 501 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNG 560
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
FP R L LF M G+ I+ V + + L + ++ H +K N +
Sbjct: 561 FPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIAC 620
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
S++D Y K +T + ++F+ ++ K+A SWN ++ Y + G KEA+ +F +M R P
Sbjct: 621 SIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNP 680
Query: 243 LNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RG 300
+ TF L AC+ +EG++ + + + + + +M + G+L++A R
Sbjct: 681 DDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRV 740
Query: 301 LLDQPDERNIISWTSIVSGYAISGRI----REARELFNEMPER--NVISWNAMLAGYTRS 354
+ +E ++ W S++S I + + A +LF PE+ N + + + AG +
Sbjct: 741 AAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGK- 799
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
W D V +R+ K++ L AG S I++ +V F+ V
Sbjct: 800 --W----DDVRQVRQRMKEMS-------LRKDAGCSWIELNGKVFSFV----------VG 836
Query: 415 NALLDMYRKCGNLRS---ARIWFYQMSQRRDKVSWNAVLTGYAR----RGQSEEAMTSF 466
LD + + +L S +IW +M R D S L+ + RG SE+ ++
Sbjct: 837 ERFLDGFEEIKSLWSILEMKIW--KMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITY 893
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
LGL+L +I+MG+++H + + S+ + ++ MY CG+ +R F
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLE 494
+ + ++ WNAV++ Y+R E + F +M +T P FTF ++ ACA IS +
Sbjct: 146 L-RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVG 204
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G +H V++ ++ ALV Y + A+++F +++ NSMI F
Sbjct: 205 IGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFS 264
Query: 555 HN 556
N
Sbjct: 265 DN 266
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 483 LLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
LL A +E G++IH V + +V+C ++ +Y C + + F S
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCT-RIITMYAMCGSPDDSRSAFDALRS 148
Query: 541 LDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
++ N++I + NE E LE+F ++ K + PD+ TF ++ AC +V + L
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ K G++ L ++ Y +G++ + + MP
Sbjct: 209 VH-GLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 185/620 (29%), Positives = 304/620 (49%), Gaps = 57/620 (9%)
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
+ P + N+AI + + G+ D A +F+ MP R S+NAM+ Y +N +LF
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M + + + +R+ LG + +L L+ K+ +V+ ++++ Y +
Sbjct: 101 DKMPERDLFSWNVMLTGYVRNR----RLGEAHKLFDLMPKK----DVVSWNAMLSGYAQN 152
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ +AR +F+ + ++N++SWN ++ Y+ G KEA +F ++ N
Sbjct: 153 GFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWN------- 205
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
L YVK L DAR L D+ R++I
Sbjct: 206 --------------------------------CLMGGYVKRNMLGDARQLFDRMPVRDVI 233
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW +++SGYA G + +A+ LFNE P R+V +W AM++GY ++ + EA + M
Sbjct: 234 SWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK- 292
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
++++ +L AG + K + G + NI N ++ Y + G + AR
Sbjct: 293 ---NEISYNAML---AGYVQYKK-MVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQAR 345
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANI 490
F M QR D VSW A+++GYA+ G EEA+ F EM+ + S + TF L+ CA+I
Sbjct: 346 KLFDMMPQR-DCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADI 404
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
++LE GKQ+H V++ +E AL+ +Y KC + A VF+ DV+ N+MI
Sbjct: 405 AALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMI 464
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ + GR+AL +F MKK G+KPD IT G+L AC H G + ++F SM Y +
Sbjct: 465 AGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNV 524
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P +HY CMI L R G ++E E+ + MPF+P + R +G LGE AA
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE 584
Query: 671 RLNELNPWAPFQFKITTNRF 690
+ ++ P + + +N +
Sbjct: 585 MVFKMEPQNSGMYVLLSNLY 604
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 228/438 (52%), Gaps = 22/438 (5%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
L +L P +F N + Y + L +A LFD MP++D SWNAML Y QNGF
Sbjct: 95 LARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGF 154
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
E+F M H N I++ +L + L +++L + +I +
Sbjct: 155 VDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRL----FESQSNWELISWNC 206
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L+ Y K ++ DAR++FD + ++ +SWN ++ Y G+ +A +F + P+
Sbjct: 207 LMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLF------NESPI 260
Query: 244 NFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
F ++ + GM + ++ + +++ ++ YV+ ++ A L
Sbjct: 261 RDVFTWTAMVSGYVQN---GMVDEARKYFDEMPVK-NEISYNAMLAGYVQYKKMVIAGEL 316
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
+ RNI SW ++++GY +G I +AR+LF+ MP+R+ +SW A+++GY ++ ++EAL
Sbjct: 317 FEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEAL 376
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ M++ + ++ T L+ CA ++ +++GK+VHG + + + + FV NALL MY
Sbjct: 377 NMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMY 436
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG+ A F + + +D VSWN ++ GYAR G +A+ F M+ +P + T
Sbjct: 437 FKCGSTDEANDVFEGIEE-KDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITM 495
Query: 481 ETLLAACANISSLEQGKQ 498
+L+AC++ +++G +
Sbjct: 496 VGVLSACSHSGLIDRGTE 513
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 161/339 (47%), Gaps = 26/339 (7%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P + N I YG+ G + AR LFD MP+RD SW A++ Y QNG L +F+
Sbjct: 321 PCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFV 380
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M G S+N+ T++ L + A+ L + KQ+HG +VK GF + ++L+ Y KC
Sbjct: 381 EMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCG 440
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+A +F+ I+ K+ VSWN ++ Y G G++A+V+F M + ++P T L
Sbjct: 441 STDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLS 500
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYVKCGRLEDARGLL-DQP 305
ACS + G+ G + D V + + ++ + GRLE+A L+ + P
Sbjct: 501 ACS-----HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMP 555
Query: 306 DERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+ SW +++ I G +A E+ +M +N + + Y S W +
Sbjct: 556 FDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGK 615
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
MR+ + +VT G S +++ ++H F
Sbjct: 616 MRSKMREA--GVQKVT---------GYSWVEVQNKIHTF 643
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 158/373 (42%), Gaps = 63/373 (16%)
Query: 273 IDFEGDDVVL-GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ F+ D+V +++ G + A + + R+ +S+ +++SGY + + AR+
Sbjct: 39 VKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARD 98
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF++MPER++ SWN ML GY R+ EA LM K D V+ +L+ A
Sbjct: 99 LFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK----DVVSWNAMLSGYAQNGF 154
Query: 392 IKMGKEV-HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ +EV + HRN S N LL Y G L+ AR F S + +SWN ++
Sbjct: 155 VDEAREVFNKMPHRNSIS-----WNGLLAAYVHNGRLKEARRLFESQSN-WELISWNCLM 208
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPSK--FTFETLLAACANISSLEQGKQIHCFVIRNCY 508
GY +R +A F M P + ++ T+++ A + L Q K
Sbjct: 209 GGYVKRNMLGDARQLFDRM-----PVRDVISWNTMISGYAQVGDLSQAK----------- 252
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
R+F ES DV +M+ G+ N EA + F
Sbjct: 253 ------------------------RLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M + + I+++ +L + + +A + F++M C+ + + MI Y + G
Sbjct: 289 MPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCR-----NISSWNTMITGYGQNG 339
Query: 629 YMKELEDFVNRMP 641
+ + + MP
Sbjct: 340 GIAQARKLFDMMP 352
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 27/217 (12%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+ E + S ++ CA A+ +++ +V F+ N + Y KCG+ D
Sbjct: 384 RDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+A +F+ + E+D SWN M+ Y ++GF + L LF M +GV ++IT VL + +
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503
Query: 155 EELELGVSKQLHGLIVKRG---FCG-----NVILESS----LVDAYGKCMVMTDARRMFD 202
H ++ RG F NV S ++D G+ + +A +
Sbjct: 504 -----------HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMR 552
Query: 203 DIQ-NKNAVSWNVIVRRYLVAGN---GKEAVVMFFKM 235
++ + A SW ++ + GN G++A M FKM
Sbjct: 553 NMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKM 589
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 184/677 (27%), Positives = 316/677 (46%), Gaps = 64/677 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPP--VFLLNRAIECYGKCGNLDDARGLFDE 102
+ + + A+ + +++ +++ F PP V + N + YGKCG+L AR +FD+
Sbjct: 333 FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD 392
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV- 161
+P+RD SWN+M+ + +L LF M V T +V + + + GV
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACS-HVRGGVR 451
Query: 162 -SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
KQ+H ++ G ++LV Y + + DA+ +F K+ VSWN ++
Sbjct: 452 LGKQVHAYTLRNGDL-RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDD 279
+EA++ + M+ + +RP T A+ L ACS L G +IH ++ D +
Sbjct: 511 QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENS 570
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V +L +MY C + + R + D R + W ++++GYA + +A LF EM
Sbjct: 571 FVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE 630
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+ NA T +L C + +H
Sbjct: 631 SEFCPNA------------------------------TTFASVLPACVRCKVFSDKEGIH 660
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G+I + + + +V NAL+DMY + G + ++ F +M+ +RD VSWN ++TG G+
Sbjct: 661 GYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGCIVCGRY 719
Query: 460 EEAMTSFSEMQWET-------------------RPSKFTFETLLAACANISSLEQGKQIH 500
++A+ EMQ +P+ T T+L CA +++L +GK+IH
Sbjct: 720 DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIH 779
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ ++ ++V ALV++Y KC CL A RVF + +VI N +I+ + + +G
Sbjct: 780 AYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGE 839
Query: 561 EALEVFGLM------KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
EALE+F +M +E I+P+ +T+ I AC H G V L F +M+ +G+ P+
Sbjct: 840 EALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRG 899
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFN-PTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY C++ L R G +KE + +N MP N V + CR + GE AA+ L
Sbjct: 900 DHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLF 959
Query: 674 ELNPWAPFQFKITTNRF 690
L P + + +N +
Sbjct: 960 VLEPNVASHYVLMSNIY 976
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 173/392 (44%), Gaps = 39/392 (9%)
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++ ++ W ++R + + ++A+ + ML P NF F L A + + G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 264 MQIHGVIIKIDFEGDD--VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
QIH + K V SL MY KCG L AR + D +R+ +S
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVS--------- 400
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
WN+M+A R W+ +L LM D TL
Sbjct: 401 ----------------------WNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVS 438
Query: 382 ILNVCAGL-SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+ + C+ + +++GK+VH + RN + +NAL+ MY + G + A+ F +
Sbjct: 439 VAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALF-GVFDG 496
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
+D VSWN V++ ++ + EEA+ M + RP T ++L AC+ + L G++I
Sbjct: 497 KDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREI 556
Query: 500 HCFVIRNCYEI-NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
HC+ +RN I N ALV++Y C + VF V + N+++ G+ NE
Sbjct: 557 HCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEF 616
Query: 559 GREALEVFGLMKKEG-IKPDHITFHGILLACI 589
+AL +F M E P+ TF +L AC+
Sbjct: 617 DDQALRLFVEMISESEFCPNATTFASVLPACV 648
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 173/398 (43%), Gaps = 57/398 (14%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ +A + C K + + +V ++ N ++ Y + G ++ ++ +F
Sbjct: 638 TTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGR 697
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLEL---------------FLDMNHSG---VSANQI 144
M +RD SWN M+ G L L F+D G N +
Sbjct: 698 MNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSV 757
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T VL A LG K++H VK+ +V + S+LVD Y KC + A R+FD +
Sbjct: 758 TLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM 817
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML------REDIRPLNFTFANALFACSFLS 258
+N ++WNV++ Y + G G+EA+ +F M RE IRP T+ ACS
Sbjct: 818 PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSG 877
Query: 259 SPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNI 310
EG+ + HGV + D L ++ + GR+++A L++ P N
Sbjct: 878 MVDEGLHLFHTMKASHGVEPRGDH------YACLVDLLGRSGRVKEAYELINTMPSNLNK 931
Query: 311 I-SWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFV 364
+ +W+S++ I + A+ LF + E NV S +++ Y+ + LW +AL
Sbjct: 932 VDAWSSLLGACRIHQSVEFGEIAAKHLF--VLEPNVASHYVLMSNIYSSAGLWDQALG-- 987
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+RK K++ + G S I+ G EVH F+
Sbjct: 988 --VRKKMKEMG-------VRKEPGCSWIEHGDEVHKFL 1016
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 292/620 (47%), Gaps = 77/620 (12%)
Query: 69 VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTL 128
+T P V NRAI + + G + DA LF MP R ++N ML Y NG + L
Sbjct: 99 ITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQAL 158
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG-------LIVKRGFCGNVILE 181
F + + +Y +L + LGVS L + VK NV++
Sbjct: 159 SFFRSIPRP----DSFSYNTLLHA------LGVSSSLADVRALFDEMPVKDSVSYNVMIS 208
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S + +++ AR FD K+AVSWN ++ Y+ G +EA +F R +
Sbjct: 209 S-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDS--RTEWD 261
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
+++ NAL A S E Q + + D V ++ Y + G + +AR L
Sbjct: 262 AISW---NALMAGYVQRSQIEEAQ---KMFNKMPQRDVVSWNTMVSGYARRGDMAEARRL 315
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D R++ +WT+IVSGYA +G + EA+ +F+ MP++N +SWNAM+A Y + + +EA
Sbjct: 316 FDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAK 375
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ M C N+ N +L Y
Sbjct: 376 ELFDAM-----------------PC----------------------RNVASWNTMLTGY 396
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM----QWETRPSK 477
+ G L AR F M Q+ D VSW A+L Y++ G SEE + F EM +W R +
Sbjct: 397 AQAGMLDEARAIFGMMPQK-DAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSA- 454
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
F +L+ CA+I++LE G Q+H +I+ Y + AL+ +Y KC +E A F+E
Sbjct: 455 --FACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEE 512
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
DV+ N+MI G+ + G+EALEVF M+K KPD IT G+L AC H G V+
Sbjct: 513 MEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKG 572
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
+ +F SM +G+ + EHY CMI L R G + E + + MPF P M + R
Sbjct: 573 ISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASR 632
Query: 658 KNGYATLGEWAARRLNELNP 677
+ + LG AA ++ EL P
Sbjct: 633 IHRNSELGRNAAEKIFELEP 652
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 200/482 (41%), Gaps = 100/482 (20%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S+S Y L S ++ + R L + P N I + G + AR
Sbjct: 167 PDSFS-YNTLLHALGVSSSLADVRALFDEM----PVKDSVSYNVMISSHANHGLVSLARH 221
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEEL 157
FD PE+D SWN ML AY +NG ELF +S N + V RS EE
Sbjct: 222 YFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEA 281
Query: 158 ELGVSKQLHGLIV----------KRGFCG------------NVILESSLVDAYGKCMVMT 195
+ +K +V +RG +V +++V Y + ++
Sbjct: 282 QKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLE 341
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+A+R+FD + +KNAVSWN ++ Y+ +EA +F M ++ N
Sbjct: 342 EAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWN----------- 390
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
++ Y + G L++AR + +++ +SW +
Sbjct: 391 ----------------------------TMLTGYAQAGMLDEARAIFGMMPQKDAVSWAA 422
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ Y+ G E +LF EM R W ++
Sbjct: 423 MLAAYSQIGFSEETLQLFKEM---------------GRCGEW----------------VN 451
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ +L+ CA ++ ++ G ++H + + Y FV NALL MY KCG++ A F
Sbjct: 452 RSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFE 511
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+M + RD VSWN ++ GYAR G +EA+ F M + T+P T +LAAC++ +E
Sbjct: 512 EMEE-RDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVE 570
Query: 495 QG 496
+G
Sbjct: 571 KG 572
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 30/358 (8%)
Query: 57 AIVEARKLES--NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
A V+ R +E L P V N + Y + G LD+AR +F MP++D SW AM
Sbjct: 364 AYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAM 423
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
L AY+Q GF TL+LF +M G N+ +A VL + A+ L QLH ++K G+
Sbjct: 424 LAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGY 483
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
+ ++L+ Y KC M +A F++++ ++ VSWN ++ Y G GKEA+ +F
Sbjct: 484 GVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDT 543
Query: 235 MLREDIRPLNFTFANALFACSF-------LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
M + +P + T L ACS +S Y + GV K + + +
Sbjct: 544 MRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEH------YTCMID 597
Query: 288 MYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAI---SGRIREARELFNEMPERNVIS 343
+ + GRL++A L+ D P E + W +++ I S R A E E+ N
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGM 657
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ + Y S W++ +M + + + +V G S I++ +VH F
Sbjct: 658 YVLLSNIYASSGKWRDVDKMRHIMHE--RGVKKVP---------GFSWIEVQNKVHTF 704
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 181/645 (28%), Positives = 304/645 (47%), Gaps = 40/645 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC--GNLDDARGLFDEMPERDGGSW 111
S+ A+ E R+L + L+ L + + Y + G L A +FD MP R+ +W
Sbjct: 69 SAPALTEVRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAW 128
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAE--ELELG--VSKQLH 166
NA++ G L + DM G V A++ TY VL++ A E+E G V + +
Sbjct: 129 NAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVE 188
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I + GNV ++ +LVD + KC + +AR MF+ + ++ SW ++ + G+
Sbjct: 189 TDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWL 248
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
E + + +M E RP + FA + AC + GM +HG +K D V +L
Sbjct: 249 EVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALV 308
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+MY KC RL+ A LF + ++V SW+
Sbjct: 309 DMYCKCARLD-------------------------------MAASLFWSIDHKDVFSWST 337
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
++AG++++ ++ ++ M + + T+ IL + L ++ GKE+H F RN
Sbjct: 338 IIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNR 397
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ F+++AL+D Y + G +R A+I F + + D V N+++ GY SE A+
Sbjct: 398 LEHSEFLASALIDFYCRQGYIRDAQIVF-EFKPKNDLVVLNSMIRGYVVNKDSESALRLL 456
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+ E RP T ++L C S L QGK++H + IR+ AL ++Y KC
Sbjct: 457 RALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKC 516
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
CLE A ++F + + + N++I + +A +F LMK++G+ PD +TF +L
Sbjct: 517 GCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALL 576
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
C H G + L F+DSM Y I P EHY C++ LY R G + + F+ + P
Sbjct: 577 SCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQEVPE 636
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ +L + CR + + E A R+ E NP P + +N +
Sbjct: 637 IDVLGCLLSACRDHHRMDIAELVAERIFEQNPNDPGYHILLSNVY 681
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 251/536 (46%), Gaps = 56/536 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT----FYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
Y + + CA+ + + RK++ N+ T VF+ ++ + KCG L +AR +F
Sbjct: 164 YPPVLKACAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMF 223
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+ M RD SW AM+G + G + L M G + + +A V+ + + EL
Sbjct: 224 ESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELR 283
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
LHG VK G ++ + ++LVD Y KC + A +F I +K+ SW+ I
Sbjct: 284 TGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTI----- 338
Query: 221 VAGNGKE-----AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+AG+ + +V +F +M+ I+P + T A+ L + S L G +IH ++
Sbjct: 339 IAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRL 398
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E + + +L + Y + G + DA + +F
Sbjct: 399 EHSEFLASALIDFYCRQGYIRDA-------------------------------QIVFEF 427
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
P+ +++ N+M+ GY + + AL + + K D VT+ +L +C S + G
Sbjct: 428 KPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQG 487
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
KE+H + R++ SS V+NAL DMY KCG L A F M++ R+ V++N +++ +
Sbjct: 488 KELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTE-RNTVTYNTLISSLGK 546
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NV 512
G +++A F M+ + P K TF LL+ C++ +++G + ++R+ Y I +
Sbjct: 547 HGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRD-YNIPPDK 605
Query: 513 VCRGALVEVYTKCCCLEYA---IRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+V++Y++ L+ A I +E +DV+ C +L C + + E+
Sbjct: 606 EHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVLGC---LLSACRDHHRMDIAEL 658
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 4/324 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
++A + C K + L V + + N ++ Y KC LD A LF +
Sbjct: 268 IFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSI 327
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+D SW+ ++ ++QN ++ LF +M SG+ N T A++L S +E L K
Sbjct: 328 DHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGK 387
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H ++ + L S+L+D Y + + DA+ +F+ + V N ++R Y+V
Sbjct: 388 EIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNK 447
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ + A+ + +L+E +RP + T + L C+ S +G ++H I+ + V
Sbjct: 448 DSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTN 507
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV-- 341
+LT+MY KCG LE A + ERN +++ +++S G +A LF+ M V
Sbjct: 508 ALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSP 567
Query: 342 --ISWNAMLAGYTRSLLWKEALDF 363
+++ A+L+ + L + L F
Sbjct: 568 DKVTFVALLSCCSHGGLIDKGLCF 591
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 308/621 (49%), Gaps = 38/621 (6%)
Query: 40 VSYSLYAHLFQLCASSKAIVE-ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
+S ++ + + CA S+ + RK+ ++ + + YG+ GNL DA
Sbjct: 656 ISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEK 715
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD MP RD +W+ ++ + +N + L +F M GV + +T +V+ AE
Sbjct: 716 VFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC 775
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +++ +HG I ++ F + L +SL+ Y KC + + ++F+ I KNAVSW ++
Sbjct: 776 LRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISS 835
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y ++A+ F +ML+ I P T + L +C EG +HG I+ + + +
Sbjct: 836 YNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPN 895
Query: 279 -DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ + +L E+Y +CGRL D +L +RNI+ W S +S YA G + EA LF +M
Sbjct: 896 YESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQM- 954
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++W D TL I++ C +++GK+
Sbjct: 955 ----VTWRI--------------------------KPDSFTLASIISACENTGLVRLGKQ 984
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + R D S FV N+++DMY K G + A F Q+ + R V+WN++L G+++ G
Sbjct: 985 IHGHVIRTDVSDE-FVQNSVIDMYSKSGFVNLACTVFDQI-KHRSIVTWNSMLCGFSQNG 1042
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
S EA+ F M +K TF ++ AC++I SLE+G+ +H +I C ++
Sbjct: 1043 NSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIV-CGIKDLFTDT 1101
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+++Y KC L A VF+ S+ ++ +SMI + + R A+ F M + G KP
Sbjct: 1102 ALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 1161
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+ + F +L AC H G+V+ +F+ M+ +G+ P EH+ C I L R G +KE
Sbjct: 1162 NEVVFMNVLSACGHSGSVEEGKYYFNLMKL-FGVSPNSEHFACFIDLLSRSGDLKEAYRT 1220
Query: 637 VNRMPFNPTVPMLRKIFDKCR 657
+ MPF + + + CR
Sbjct: 1221 IKEMPFLADASVWGSLVNGCR 1241
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 3/290 (1%)
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
R+ + T ++ YA G +R +F P + + ++ L A+D +
Sbjct: 590 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 649
Query: 368 RKTTKDIDQVTLGLILNVCAGLSE-IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
I + +L CAG E + +G++VHG I ++ + + +LL MY + GN
Sbjct: 650 VSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGN 709
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLA 485
L A F M RD V+W+ +++ + +A+ F M + P T +++
Sbjct: 710 LSDAEKVFDGMPV-RDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVE 768
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
CA + L + +H + R ++ + +L+ +Y+KC L + ++F++ + + +
Sbjct: 769 GCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVS 828
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+MI + E +AL F M K GI+P+ +T + IL +C G ++
Sbjct: 829 WTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIR 878
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 182/650 (28%), Positives = 307/650 (47%), Gaps = 43/650 (6%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ P S +L L L AS AR + V + N I Y KCG
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFF 386
Query: 94 DDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
A +F + + D SWN MLGA G+ + F M +G+ N++++ +L +
Sbjct: 387 SAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446
Query: 153 SAEELELGVSKQLHGLIV--KRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKN 208
+ L +++H LI+ +R + + + + LV YGKC +++A +F + + +++
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSV-ATMLVSMYGKCGSISEAELVFKEMPLPSRS 505
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V+WNV++ Y KEA +ML+ + P +F + L +C E +
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRM 562
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I++ + + +L M+ +C LE AR + ++ D +++SWT++VS A + +E
Sbjct: 563 CILESGYR-SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKE 621
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
LF M VI D+ TL L+ C
Sbjct: 622 VHNLFRRMQLEGVIP-------------------------------DKFTLATTLDTCLA 650
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+ + +GK +H + ++I V NALL+MY CG+ R A + F++ + RD VSWN
Sbjct: 651 STTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREA-LSFFETMKARDLVSWNI 709
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+ YA+ G ++EA+ F +MQ E +P K TF T L + + GK H +
Sbjct: 710 MSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESG 769
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +V LV++Y KC L+ A+ +F+ + V++ N++I + EA+++F
Sbjct: 770 LDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFW 829
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M++EG++PD T I+ AC H G V+ F +M+ +GI P LEHY C + L R
Sbjct: 830 KMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRA 889
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G ++ E + +MPF + + C+ G A LGE A+R+ EL+P
Sbjct: 890 GQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDP 939
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 266/582 (45%), Gaps = 64/582 (10%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
++SG ++ D Y L Q C S + + + + +FL N I Y
Sbjct: 12 SLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYV 71
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYA 147
+CG+L++A +F +M ER+ SW A++ A Q G R LF M S + N T
Sbjct: 72 RCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLV 131
Query: 148 NVLRSSAEELELGVSKQLHGLI----VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+L + A +L + + +H +I ++R ++ +++++ Y KC + DA +F
Sbjct: 132 AMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLA 191
Query: 204 IQNKNAVSWNVIV------RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
I K+ VSW + RR+ +A+ +F +ML + + P TF AL AC+ L
Sbjct: 192 IPEKDVVSWTAMAGAYAQERRFY-----PDALRIFREMLLQPLAPNVITFITALGACTSL 246
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL---LDQPDERNIISWT 314
+G +H ++ + D + +L MY KCG E A + + E +++SW
Sbjct: 247 R---DGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWN 303
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++S +GR +A +F + L G MR
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLR----------LEG----------------MRP----- 332
Query: 375 DQVTLGLILNVCAGLSEIKMG--KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ VTL ILN A S + G + HG I + Y ++ + NA++ MY KCG +A
Sbjct: 333 NSVTLITILNALAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWA 391
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F ++ + D +SWN +L R + + +F M P+K +F +L AC+N
Sbjct: 392 VFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSE 451
Query: 492 SLEQGKQIHCFVI---RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES--SSLDVIIC 546
+L+ G++IH ++ R+ E +V LV +Y KC + A VFKE S ++
Sbjct: 452 ALDFGRKIHSLILTRRRDYVESSVATM--LVSMYGKCGSISEAELVFKEMPLPSRSLVTW 509
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N M+ + N+R +EA M + G+ PD ++F +L +C
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 26/368 (7%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVF 365
E+++ +++ Y G + EA +F++M ERNV+SW A+++ + + A F
Sbjct: 57 EQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRT 116
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH----RNDYSSNIFVSNALLDMY 421
++ +++ + TL +LN CA ++ +G+ +H I ++ V NA+++MY
Sbjct: 117 MLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMY 176
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR-RGQSEEAMTSFSEMQWET-RPSKFT 479
KCG+L A F + + +D VSW A+ YA+ R +A+ F EM + P+ T
Sbjct: 177 AKCGSLEDAIAVFLAIPE-KDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVIT 235
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
F T L AC +SL G +H + + + AL+ +Y KC E A VFK +
Sbjct: 236 FITALGAC---TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMA 292
Query: 540 S---LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S LD++ N+MI R +A+ +F ++ EG++P+ +T IL A G
Sbjct: 293 SRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFG 352
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
A + F + G + + +I +Y + G+ F+ + R+I KC
Sbjct: 353 AARGFHGRIWESGYLRDVVIGNAIISMYAKCGF------------FSAAWAVFRRIRWKC 400
Query: 657 RKNGYATL 664
+ T+
Sbjct: 401 DVISWNTM 408
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 159/374 (42%), Gaps = 27/374 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L A C +S + + + + + + + N + Y CG+ +A
Sbjct: 636 PDKFTL-ATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALS 694
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
F+ M RD SWN M AY Q G + LF M GV +++T++ L S
Sbjct: 695 FFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSAL 754
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ K H L + G +V + + LV Y KC + +A +F + V N I+
Sbjct: 755 VSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGA 814
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G +EAV MF+KM +E +RP T + + AC EG + ++ G
Sbjct: 815 LAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCS--SFLTMKEYFGI 872
Query: 279 DVVL---GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REAR 330
L ++ + G+LE A ++ + P E N + WTS++ + G R A+
Sbjct: 873 SPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQ 932
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV--CAG 388
+ E+ N + + Y + WK+A D+D+ + L NV G
Sbjct: 933 RIL-ELDPHNSAAHVVLSNIYCATGKWKDA------------DVDRKKM-LDENVKNAPG 978
Query: 389 LSEIKMGKEVHGFI 402
+S ++GK+VH F+
Sbjct: 979 MSWFEIGKQVHEFV 992
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/638 (28%), Positives = 312/638 (48%), Gaps = 35/638 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V ++ L +LC +A E K+ S ++ + V L N + + + GNL DA +
Sbjct: 92 VDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYV 151
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELE 158
F +M ER+ SWN ++G Y + G+ + L+ M GV + T+ VLR+ +
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L K++H +V+ G+ ++ + ++L+ Y KC + AR +FD + ++ +SWN ++
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G E + +FF M + P T + + AC L G IH +I F D
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SLT+MY+ G +A L + + ++I+SWT+++SGY +N +P+
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE-----------YNFLPD 380
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+ A+D +M + + D++T+ +L+ CA L ++ G E+
Sbjct: 381 K--------------------AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + S + V+N L++MY KC + A F+ + R++ +SW +++ G +
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EA+ +M+ +P+ T LAACA I +L GK+IH V+R ++ AL
Sbjct: 480 CFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y +C + A F S DV N ++ G+ +G +E+F M K ++PD
Sbjct: 540 LDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
ITF +L C V+ L +F M YG+ P L+HY C++ L R G ++E F+
Sbjct: 599 ITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+MP P + + + CR + LGE +A+ + EL+
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELD 695
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+EA+ + M++ +D+ ++ +C + G +V+ + S + + NA
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRP 475
L M+ + GNL A F +MS+ R+ SWN ++ GYA++G +EAM + M W +P
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
+TF +L C I L +GK++H V+R YE+++ AL+ +Y KC ++ A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
D+I N+MI G+ N E LE+F M+ + PD +T ++ AC G+ +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
L + + G + + ++Y G +E E +RM
Sbjct: 315 LG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 248/443 (55%), Gaps = 2/443 (0%)
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
F++ L +C +S G Q+H +II D + L +Y KCG+L+ A L
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+NI+S +++GY SG AR++F+EMPERNV +WNAM+AG + +E L
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + D+ LG +L CAGL + G++VHG++ + + N+ V ++L MY KCG+
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLA 485
L M + + V+WN ++ G A+ G EE + ++ M+ RP K TF ++++
Sbjct: 235 LGEGERLIRAMPSQ-NVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVIS 293
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
+C+ +++L QG+QIH VI+ + V +L+ +Y++C CLEY+++VF E + DV+
Sbjct: 294 SCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVC 353
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
+SMI + + RG EA+++F M++E ++ + +TF +L AC H G + ++FFD M
Sbjct: 354 WSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMV 413
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
KYG+ P+LEHY CM+ L RYG ++E E + MP V + + C+ + +
Sbjct: 414 EKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA 473
Query: 666 EWAARRLNELNPWAPFQFKITTN 688
+ + L+P P + + +N
Sbjct: 474 RRISEEVFRLDPRDPVPYVLLSN 496
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 184/401 (45%), Gaps = 53/401 (13%)
Query: 17 SPKPTPSKTLTKTIS-----GHLKS----------DEPVSYSLYAHLFQLCASSKAIVEA 61
S P+ LT + GHLK EP SL++HL Q C S ++
Sbjct: 15 STNPSSGSELTAEFTNLCSKGHLKQAFDRFSSHIWSEP---SLFSHLLQSCISENSLSLG 71
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA------------------------- 96
++L S ++T + F+ N + Y KCG LD A
Sbjct: 72 KQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRS 131
Query: 97 ------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
R +FDEMPER+ +WNAM+ Q F L LF MN G ++ +VL
Sbjct: 132 GDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVL 191
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
R A L +Q+HG + K GF N+++ SSL Y KC + + R+ + ++N V
Sbjct: 192 RGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVV 251
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+WN ++ G +E + + M RP TF + + +CS L++ +G QIH +
Sbjct: 252 AWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEV 311
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
IK V+ SL MY +CG LE + + + + +++ W+S+++ Y GR EA
Sbjct: 312 IKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAI 371
Query: 331 ELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+LFN+M E N +++ ++L + L ++ + F LM
Sbjct: 372 DLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLM 412
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 175/383 (45%), Gaps = 64/383 (16%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM----------- 194
++++L+S E L + KQLH LI+ G + + + L++ Y KC +
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 195 --------------------TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
AR+MFD++ +N +WN +V + +E + +F +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M P F + L C+ L + G Q+HG + K FE + VV+ SL MY+KCG
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L + L+ +N+++W ++++G A +G E + +N M +AG+
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMK----------MAGFRP- 283
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
D++T +++ C+ L+ + G+++H + + S + V
Sbjct: 284 --------------------DKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI 323
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET- 473
++L+ MY +CG L + F + + D V W++++ Y G+ EA+ F++M+ E
Sbjct: 324 SSLISMYSRCGCLEYSLKVFLE-CENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKL 382
Query: 474 RPSKFTFETLLAACANISSLEQG 496
+ TF +LL AC++ E+G
Sbjct: 383 EANDVTFLSLLYACSHCGLKEKG 405
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA +A+V R++ + + +++ Y KCG+L + L MP ++ +W
Sbjct: 194 CAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAW 253
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ++ QNG+P L+ + M +G ++IT+ +V+ S +E LG +Q+H ++K
Sbjct: 254 NTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIK 313
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G V + SSL+ Y +C + + ++F + +N + V W+ ++ Y G G EA+ +
Sbjct: 314 AGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDL 373
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFEGDDVVLGSLTEMYV 290
F +M +E + + TF + L+ACS +G++ +++ K + + ++
Sbjct: 374 FNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLG 433
Query: 291 KCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARELFNE---MPERNVISWNA 346
+ G +E+A L+ P + ++I+W +++S I + AR + E + R+ + +
Sbjct: 434 RYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVL 493
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ + W + D +RK +D L G+S +++ ++H F
Sbjct: 494 LSNIHASDKRWDDVSD----VRKAMRDRK-------LKKEPGISWLEVKNQIHQF 537
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/611 (26%), Positives = 296/611 (48%), Gaps = 32/611 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KCG++ A+ +FD M RD SW M+ Y +NG L+L M V
Sbjct: 237 NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVK 296
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N++ N L AE +L K+++ ++ G ++++ + +V Y KC + AR +
Sbjct: 297 MNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKAREL 356
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F ++ ++ V+W+ + + G +E + +F M E ++P + + C+ +S+
Sbjct: 357 FLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNI 416
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +H IK D E D ++ +L MY++ A L ++ ++I+ W ++++G+
Sbjct: 417 GLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGF 476
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G A E+FN + ++ + + G
Sbjct: 477 TKYGDPHLALEMFNRLQLSGILPDSGTMVG------------------------------ 506
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+ + CA + ++ +G +HG I ++ + S+I V AL+DMY KCG+L S F
Sbjct: 507 -LFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHV 565
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
+D+VSWN ++ GY G S EA+++F M+ E RP+ TF T+L A + +S L +
Sbjct: 566 KDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAF 625
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H +IR + + +L+++Y KC L Y+ + F E + D I N+M+ + + +G
Sbjct: 626 HTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQG 685
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
A+ +F +M++ ++ D +++ +L AC H G ++ F SM K+ + P +EHY C
Sbjct: 686 ELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYAC 745
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
M+ L G E+ +N+M P + + C+ + TLGE A L +L P
Sbjct: 746 MVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRN 805
Query: 680 PFQFKITTNRF 690
P + ++ +
Sbjct: 806 PVHHVVLSDIY 816
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/601 (25%), Positives = 285/601 (47%), Gaps = 37/601 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C S+ E + ++V V++ I+ + K G LD+AR +FD+MP +D
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
G WNAM+ +Q+ P LE+F M G ++++ N+ + + ++G K +HG
Sbjct: 165 GVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHG 224
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+V+R CG ++ +SL+D Y KC + A+R+FD + ++ VSW ++ Y+ G E
Sbjct: 225 YVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFE 282
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ + KM R +++ NAL + + +G +I+ +++ D VV +
Sbjct: 283 GLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVC 342
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L+ AR L + R++++W++ +S +G RE +F M +
Sbjct: 343 MYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGL------ 396
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
D+ L ++++ C +S I +GK +H + + D
Sbjct: 397 -------------------------KPDKAILSILVSGCTEISNIGLGKIMHCYAIKADM 431
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S+I + L+ MY + A F +M Q +D V WN ++ G+ + G A+ F+
Sbjct: 432 ESDISMVTTLVSMYIRFELFTYAMTLFNRM-QIKDIVVWNTLINGFTKYGDPHLALEMFN 490
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+Q P T L +ACA + L+ G +H + ++ +E ++ + AL+++Y KC
Sbjct: 491 RLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCG 550
Query: 527 CLEYAIRVFKESSSL-DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
L R+F + + D + N MI G+ HN EA+ F MK E ++P+ +TF IL
Sbjct: 551 SLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTIL 610
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
A + ++ A+ F + + G + +I +Y + G ++ E + M T
Sbjct: 611 PAVSYLSILREAMAFHTCI-IRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDT 669
Query: 646 V 646
+
Sbjct: 670 I 670
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 229/479 (47%), Gaps = 35/479 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+N+ + AY++ + + L+ + G+ ++ T+ VL++ L+ ++ IV
Sbjct: 67 YNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIV 126
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
G +V + +SL+D + K + +AR +FD + K+ V WN ++ + N EA+
Sbjct: 127 FNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALE 186
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
MF++M E + N A S L IHG +++ G VV SL +MY
Sbjct: 187 MFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYC 244
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG + A+ + D+ R+ +SW ++++GY +G E +L ++M NV
Sbjct: 245 KCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNV--------- 295
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+++V + L V A + +++ GKE++ + + S+
Sbjct: 296 ----------------------KMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSD 333
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
I V+ ++ MY KCG L+ AR F + + RD V+W+A L+ G E ++ F MQ
Sbjct: 334 IVVATPIVCMYAKCGELKKARELFLSL-EGRDLVAWSAFLSALVETGYPREVLSIFQVMQ 392
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+E +P K L++ C IS++ GK +HC+ I+ E ++ LV +Y +
Sbjct: 393 YEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFT 452
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
YA+ +F D+++ N++I GF ALE+F ++ GI PD T G+ AC
Sbjct: 453 YAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC 511
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 204/451 (45%), Gaps = 44/451 (9%)
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F I+N + + +N ++ Y + +A+ ++ +L+ ++P FTF L AC+
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+EG+ I+ I+ E D + SL +M+ K G L++AR + D+ ++ + W +++SG
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ S EA E+F W + G+ ++D+V++
Sbjct: 176 SQSLNPCEALEMF----------WRMQMEGF---------------------EVDKVSIL 204
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+ + L ++ K +HG++ R VSN+L+DMY KCG++ SA+ F +M
Sbjct: 205 NLAPAVSRLGDVGCCKSIHGYVVRRSICG--VVSNSLIDMYCKCGDVHSAQRVFDRMGV- 261
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
RD VSW ++ GY + G E + +M + + +K L A + LE+GK+I
Sbjct: 262 RDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEI 321
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
+ + ++ ++V +V +Y KC L+ A +F D++ ++ +
Sbjct: 322 YNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYP 381
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH--- 616
RE L +F +M+ EG+KPD ++ C N+ L M C Y I +E
Sbjct: 382 REVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLG----KIMHC-YAIKADMESDIS 436
Query: 617 -YECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ +Y R+ NRM V
Sbjct: 437 MVTTLVSMYIRFELFTYAMTLFNRMQIKDIV 467
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 193/704 (27%), Positives = 325/704 (46%), Gaps = 55/704 (7%)
Query: 5 AATILKNILSKSSPKPTPSKTLTKTI----------SGHLKSDEPVSYSLYAHLFQLCAS 54
AA + I S+ P S T T H + + VS++ Q C
Sbjct: 4 AAAVKGRIKSRPRLPPLASPATTSTCAPAPAATARRGSHAAASQVVSHASLLLRLQSCPD 63
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+ EAR+L + ++ L+ + + Y K G++ A +FD MP R+ +WNA+
Sbjct: 64 FQ---EARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAV 120
Query: 115 LGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
+ G LE+F M N V+ + TY V+++ A + +++ ++
Sbjct: 121 IKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADI 180
Query: 174 FCGN----VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
GN V ++ +LVD + KC + +AR +F+ +Q ++ +W ++ + +GN E V
Sbjct: 181 ASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVV 240
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F M E + A + AC G +HG +K GD V +L +MY
Sbjct: 241 DLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMY 300
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG +E A L W++ ++V+SW++++
Sbjct: 301 CKCGCVEMADCLF----------WST---------------------NSKDVVSWSSLIV 329
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
GY+++ + ++ M + + TL IL + L I+ GKE+H F R+
Sbjct: 330 GYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLER 389
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ FV +AL+D+Y K G +R A F+ ++ +D WN+++ GYA G S+ A + +
Sbjct: 390 SEFVVSALIDLYSKQGLIRVAETIFW-LTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLL 448
Query: 470 Q-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC--RGALVEVYTKCC 526
Q +P T ++L C L QGK++H +VI+ C IN VC AL+++Y KC
Sbjct: 449 QKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYC--INSVCSVNNALLDMYCKCG 506
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
LE A VF+ + + + N +I F + +AL F LMK++GI PD +TF +L
Sbjct: 507 FLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLS 566
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
C H G + L + SM Y I P+ EHY C++ LY R G + E F++ M P +
Sbjct: 567 CCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI 626
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+L + CR + + E +R+ E NP P + +N +
Sbjct: 627 DVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIY 670
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/687 (26%), Positives = 319/687 (46%), Gaps = 98/687 (14%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S A+ +AR+L L+ P V N + Y K G L DA LF MP RD SWN
Sbjct: 71 SCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNT 127
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
++ Y Q+ +LE FL M+ SG S N T A ++S ++ QL ++ K
Sbjct: 128 LMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKF 187
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMF------------------------------- 201
+ + ++LVD + +C + A R+F
Sbjct: 188 DSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELF 247
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + ++ VSWN++V +G +EA+ M M + +R + T+ ++L AC+ LSS
Sbjct: 248 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 307
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H +I+ D V +L E+Y K
Sbjct: 308 WGKQLHAQVIRNLPHIDPYVASALVELYAK------------------------------ 337
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
SG +EA+ +FN + +RN ++W +++G+ + + E+++ MR +DQ L
Sbjct: 338 -SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALAT 396
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
+++ C ++ +G+++H ++ + VSN+L+ MY KC NL+SA F M+++
Sbjct: 397 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 456
Query: 441 -----------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++ ++WNA+L Y + G E+ + + M
Sbjct: 457 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 516
Query: 472 E--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
E RP T+ TL CA++ + + G QI ++ I+ A++ +Y+KC +
Sbjct: 517 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 576
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A +VF + D++ N+MI G+ + G++A+E+F + K G KPD+I++ +L C
Sbjct: 577 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 636
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V+ +FD M+ + I P LEH+ CM+ L R G++ E +D ++ MP PT +
Sbjct: 637 HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 696
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELN 676
+ C+ +G L E AA+ + EL+
Sbjct: 697 GALLSACKIHGNNELAELAAKHVFELD 723
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 255/529 (48%), Gaps = 39/529 (7%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR-MFDD 203
+A+ LRS L ++ LHG +V G V L+++L+ AY C ++DARR + D
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN------------------- 244
I + N ++ NV++ Y G +AV +F +M D+ N
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 245 -------------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
FT A A+ +C L +Q+ ++ K D + D V +L +M+V+
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG ++ A L + E + S+++GY + + A ELF+ MPER+V+SWN M++
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++S +EALD V M+ +D T L CA LS ++ GK++H + RN +
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
+V++AL+++Y K G + A+ F + R+ V+W +++G+ + G E++ F++M+
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384
Query: 472 ETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E +F TL++ C + L G+Q+H +++ VV +L+ +Y KC L+
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 444
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A +F+ + D++ SMI + +A E F M ++ + IT++ +L A I
Sbjct: 445 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQ 500
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
G + L+ + M + + P Y + K G K + + R
Sbjct: 501 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 549
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + +E Y K G +A+G+F+
Sbjct: 291 TTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNS 350
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ +W ++ + Q G ++ELF M ++ +Q A ++ ++L +
Sbjct: 351 LHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 410
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKC-----------------------MV------ 193
+QLH L +K G V++ +SL+ Y KC M+
Sbjct: 411 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 470
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANA 250
+ AR FD + KN ++WN ++ Y+ G ++ + M+ ML E+ +RP T+
Sbjct: 471 GNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 530
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ L + G QI G +K+ D V ++ MY KCGR+ +AR + D + ++I
Sbjct: 531 FKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDI 590
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A E+F+++ +R + IS+ A+L+G + S L +E F F
Sbjct: 591 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEG-KFYFD 649
Query: 367 MRKTTKDI 374
M K +I
Sbjct: 650 MMKRAHNI 657
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/666 (27%), Positives = 315/666 (47%), Gaps = 45/666 (6%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H + + VS++ Q C + EAR+L + ++ L+ + + Y K G+
Sbjct: 47 HAAASQVVSHASLLLRLQSCPDFQ---EARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGD 103
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLR 151
+ A +FD MP R+ +WNA++ G LE+F M N V+ + TY V++
Sbjct: 104 VAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIK 163
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGN----VILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+ A + +++ ++ GN V ++ +LVD + KC + +AR +F+ +Q +
Sbjct: 164 ACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVR 223
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ +W ++ + +GN E V +F M E + A + AC G +H
Sbjct: 224 DLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALH 283
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
G +K GD V +L +MY KCG +E A L W++
Sbjct: 284 GCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF----------WST------------ 321
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
++V+SW++++ GY+++ + ++ M + + TL IL +
Sbjct: 322 ---------NSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLS 372
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
L I+ GKE+H F R+ + FV +AL+D+Y K G +R A F+ ++ +D WN
Sbjct: 373 VLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW-LTLDKDLAIWN 431
Query: 448 AVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+++ GYA G S+ A + +Q +P T ++L C L QGK++H +VI+
Sbjct: 432 SMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKY 491
Query: 507 CYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
C IN VC AL+++Y KC LE A VF+ + + + N +I F + +AL
Sbjct: 492 C--INSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALS 549
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
F LMK++GI PD +TF +L C H G + L + SM Y I P+ EHY C++ LY
Sbjct: 550 FFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLY 609
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFK 684
R G + E F++ M P + +L + CR + + E +R+ E NP P
Sbjct: 610 SRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHI 669
Query: 685 ITTNRF 690
+ +N +
Sbjct: 670 LLSNIY 675
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/687 (26%), Positives = 319/687 (46%), Gaps = 98/687 (14%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S A+ +AR+L L+ P V N + Y K G L DA LF MP RD SWN
Sbjct: 51 SCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNT 107
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
++ Y Q+ +LE FL M+ SG S N T A ++S ++ QL ++ K
Sbjct: 108 LMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKF 167
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMF------------------------------- 201
+ + ++LVD + +C + A R+F
Sbjct: 168 DSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELF 227
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + ++ VSWN++V +G +EA+ M M + +R + T+ ++L AC+ LSS
Sbjct: 228 DSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLR 287
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H +I+ D V +L E+Y K
Sbjct: 288 WGKQLHAQVIRNLPHIDPYVASALVELYAK------------------------------ 317
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
SG +EA+ +FN + +RN ++W +++G+ + + E+++ MR +DQ L
Sbjct: 318 -SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALAT 376
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
+++ C ++ +G+++H ++ + VSN+L+ MY KC NL+SA F M+++
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 436
Query: 441 -----------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++ ++WNA+L Y + G E+ + + M
Sbjct: 437 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 496
Query: 472 E--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
E RP T+ TL CA++ + + G QI ++ I+ A++ +Y+KC +
Sbjct: 497 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 556
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A +VF + D++ N+MI G+ + G++A+E+F + K G KPD+I++ +L C
Sbjct: 557 EARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS 616
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V+ +FD M+ + I P LEH+ CM+ L R G++ E +D ++ MP PT +
Sbjct: 617 HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVW 676
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELN 676
+ C+ +G L E AA+ + EL+
Sbjct: 677 GALLSACKIHGNNELAELAAKHVFELD 703
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 255/529 (48%), Gaps = 39/529 (7%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR-MFDD 203
+A+ LRS L ++ LHG +V G V L+++L+ AY C ++DARR + D
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN------------------- 244
I + N ++ NV++ Y G +AV +F +M D+ N
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 245 -------------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
FT A A+ +C L +Q+ ++ K D + D V +L +M+V+
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG ++ A L + E + S+++GY + + A ELF+ MPER+V+SWN M++
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++S +EALD V M+ +D T L CA LS ++ GK++H + RN +
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
+V++AL+++Y K G + A+ F + R+ V+W +++G+ + G E++ F++M+
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364
Query: 472 ETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E +F TL++ C + L G+Q+H +++ VV +L+ +Y KC L+
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A +F+ + D++ SMI + +A E F M ++ + IT++ +L A I
Sbjct: 425 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQ 480
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
G + L+ + M + + P Y + K G K + + R
Sbjct: 481 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR 529
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ Y CA ++ ++L + ++ P ++ + +E Y K G +A+G+F+
Sbjct: 271 TTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNS 330
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +R+ +W ++ + Q G ++ELF M ++ +Q A ++ ++L +
Sbjct: 331 LHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKC-----------------------MV------ 193
+QLH L +K G V++ +SL+ Y KC M+
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 450
Query: 194 --MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANA 250
+ AR FD + KN ++WN ++ Y+ G ++ + M+ ML E+ +RP T+
Sbjct: 451 GNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTL 510
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
C+ L + G QI G +K+ D V ++ MY KCGR+ +AR + D + ++I
Sbjct: 511 FKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDI 570
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFL 366
+SW ++++GY+ G ++A E+F+++ +R + IS+ A+L+G + S L +E F F
Sbjct: 571 VSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEG-KFYFD 629
Query: 367 MRKTTKDI 374
M K +I
Sbjct: 630 MMKRAHNI 637
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 276/552 (50%), Gaps = 44/552 (7%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G Y +L+ ++ + ++++H IVK G + L + LV+ Y KC M A
Sbjct: 64 GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETA 123
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD++ +N VSW ++ Y+ + AV +F +ML P N+T AL A S L
Sbjct: 124 RKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDL 183
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S G QIHG IK E D + SL +Y KCG LE A + ++N+ISWT+++
Sbjct: 184 HSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVI 243
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
S + +G + F EM V + ++
Sbjct: 244 SAWGDNGEAATGLQFFVEMLSECV-------------------------------EPNEF 272
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL L++C + + +G ++H + + SN+ + N+++ +Y KCG + A+ F +M
Sbjct: 273 TLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEM 332
Query: 438 SQRRDKVSWNAVLTGYARRGQ-----------SEEAMTSFSEMQWE-TRPSKFTFETLLA 485
+ V+WNA++ G+AR EA++ F ++ +P FTF ++L+
Sbjct: 333 -ETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLS 391
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
C+++ +LEQG+Q+H I+ + +VV ALV +Y KC +E A + F E S +I
Sbjct: 392 VCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLIS 451
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
SMI G+ N + ++AL +F M+ G++P+ ITF G+L AC H G V AL +F M+
Sbjct: 452 WTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMK 511
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+Y I P ++HY C+I ++ R G + E DF+ M P + + CR G LG
Sbjct: 512 NEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELG 571
Query: 666 EWAARRLNELNP 677
+AA +L L P
Sbjct: 572 FYAAEQLLNLKP 583
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/601 (25%), Positives = 282/601 (46%), Gaps = 57/601 (9%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
++ V + Y + Q C K + +A+K+ +++V FL+ + Y KCG +
Sbjct: 61 IREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTM 120
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+ AR +FDE+P R+ SW ++ Y + P +++F +M +G T L +S
Sbjct: 121 ETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSAS 180
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
++ + KQ+HG +K + + +SL Y KC + A + F I++KN +SW
Sbjct: 181 SDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWT 240
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ + G + F +ML E + P FT +AL C + S G QIH + IK+
Sbjct: 241 TVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKL 300
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
FE + + S+ +Y+KCG + +A+ L D+ + ++++W ++++G+A
Sbjct: 301 GFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHA------------ 348
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
M + A G EAL + ++ D T +L+VC+ L ++
Sbjct: 349 -RMMDFAKDDLAAHQCG-------TEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALE 400
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G++VH + + S++ V AL++MY KCG++ A F +MS R +SW +++TGY
Sbjct: 401 QGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSI-RTLISWTSMITGY 459
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
A+ GQ ++A+ F +M+ RP+K TF +L+AC++ +++ + +++N Y+I
Sbjct: 460 AQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALD-YFQMMKNEYKIT- 517
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
V CL I +F LD E F +K+
Sbjct: 518 -------PVMDHYACL---IDMFVRLGRLD---------------------EAFDFIKEM 546
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
++P+ + ++ C +G KL L F+ + + E Y ++ +Y G KE
Sbjct: 547 DLEPNEFIWSILIAGCRSQG--KLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKE 604
Query: 633 L 633
+
Sbjct: 605 V 605
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 7/289 (2%)
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
R L ++EAL F+ R+ TK ++ IL C + +++H I + + F
Sbjct: 50 RCLDFREALSFI---REGTK-VESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAF 105
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QW 471
+ L+++Y KCG + +AR F ++ RR+ VSW ++TGY + E A+ F EM +
Sbjct: 106 LMTFLVNVYAKCGTMETARKVFDELP-RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEA 164
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P+ +T T L+A +++ S E GKQIH + I+ E + +L +Y+KC LE A
Sbjct: 165 GAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECA 224
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
++ F+ +VI ++I + N L+ F M E ++P+ T L C
Sbjct: 225 VKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVM 284
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
++ + Q S+ K G L ++ LY + G++ E + + M
Sbjct: 285 QSLDIGTQ-IHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEM 332
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 187/654 (28%), Positives = 306/654 (46%), Gaps = 45/654 (6%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
G+ P+ + L A+L CAS + E L LV + T F+ R I
Sbjct: 8 GNASQARPIRHHLLAYL-DACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPA 63
Query: 92 NLDD---ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
D AR +FD M + + WN M+ Y+ P L +F +M GVS + T A
Sbjct: 64 ARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAA 123
Query: 149 VLRSSAEELEL---GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
V+ +SA L +H L+ + GF +V + S LV+ YG + +A ++F+++
Sbjct: 124 VVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMY 183
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ VSW ++ G+ + + M +M E I P T + L AC + EG
Sbjct: 184 ERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRW 243
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ + K E D + +L MY KCG L DA
Sbjct: 244 VYNQVGKFGIEADVDIRNALISMYTKCGCLSDAL-------------------------- 277
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
E F MP R SWN ++ G+ ++ KEAL M D +TL +L+
Sbjct: 278 -----EAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSA 332
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L E++ G VH +I N + ++N+L++MY KCG++ +A F M+ ++D VS
Sbjct: 333 CAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT-KKDVVS 391
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W ++ GY + Q A F EM+ E + +LL+AC+ + +L++G++IH ++
Sbjct: 392 WTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIE 451
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
++ ALV++Y KC C++ A +F++ + N+MI G N G+EA+E
Sbjct: 452 EMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVE 511
Query: 565 VFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F +++ + KPD IT +L AC H G V L++F M G++P EHY C++ L
Sbjct: 512 LFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMS-SLGVVPDTEHYGCIVDL 570
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + E F+ +MP P + + CR + LG+ + + + P
Sbjct: 571 LGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAP 624
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 187/420 (44%), Gaps = 37/420 (8%)
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
++F RP+ L AC+ S ++HG +++ D V G L
Sbjct: 4 LYFHGNASQARPIRHHLLAYLDACA---SRAHLAELHGRLVRAHLTSDSFVAGRLI---- 56
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
LL P R+ +R AR++F+ M + N WN M+ G
Sbjct: 57 ---------ALLASPAARH---------------DMRYARKVFDGMAQPNAFVWNCMIRG 92
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA---GLSEIKMGKEVHGFIHRNDY 407
Y+ ++AL MR+ D T+ +++ A GL G +H + R +
Sbjct: 93 YSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGF 152
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+S++FV + L++ Y +++ A F +M +R D VSW ++++ A+ G ++ + S
Sbjct: 153 TSDVFVMSGLVNYYGAFRSVKEASKVFEEMYER-DVVSWTSMISACAQCGHWDKVLKMLS 211
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EMQ E P+K T +LL+AC ++++G+ ++ V + E +V R AL+ +YTKC
Sbjct: 212 EMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCG 271
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
CL A+ F+ + N++I GF N +EAL +F M G+ PD IT +L
Sbjct: 272 CLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLS 331
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC G ++ + ++ GI +I +Y + G M E M V
Sbjct: 332 ACAQLGELRKGMHVHSYIK-DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVV 390
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 289/610 (47%), Gaps = 69/610 (11%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P V N+AI + + G + DA LF MP R ++NAML Y+ NG L L +
Sbjct: 36 PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG----RLPLAASL 91
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHG-LIVKRGFCGNVILESSLVDAYGKCMV 193
+ + +Y +L + A L ++ L + V+ NV++ S + +
Sbjct: 92 FRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHGL 146
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
++ AR FD K+AVSWN ++ Y+ G +EA +F D+ N
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN--------- 197
Query: 254 CSFLSSPYEGMQIHGVIIKID-FEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNII 311
+ +S + ++ D G DVV + + Y + G + +AR L D R++
Sbjct: 198 -ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+WT++VSGYA +G + EAR +F+ MPERN +SWNAM+A Y + + EA + +M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM---- 312
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
C N+ N +L Y + G L A+
Sbjct: 313 -------------PC----------------------RNVASWNTMLTGYAQAGMLEEAK 337
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM----QWETRPSKFTFETLLAAC 487
F M Q+ D VSW A+L Y++ G SEE + F EM +W R + F +L+ C
Sbjct: 338 AVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA---FACVLSTC 393
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
A+I++LE G Q+H +IR Y + AL+ +Y KC +E A F+E DV+ N
Sbjct: 394 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 453
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI G+ + G+EALE+F +M+ KPD IT G+L AC H G V+ + +F SM
Sbjct: 454 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 513
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
+G+ + EHY CMI L R G + E D + MPF P M + R + LG
Sbjct: 514 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 573
Query: 668 AARRLNELNP 677
AA ++ EL P
Sbjct: 574 AAEKIFELEP 583
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 221/435 (50%), Gaps = 20/435 (4%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
L ++L P P + N + +L DARGLFDEMP RD ++N M+ ++ +G
Sbjct: 87 LAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGL 146
Query: 124 PGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
F L VS N + A V EE GL R +VI +
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR--------GLFNSRTEW-DVISWN 197
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+ Y + M++AR +FD + ++ VSWN++V Y G+ EA +F D+
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV-- 255
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
FT+ + + E ++ + E + V ++ Y++ +++A+ L
Sbjct: 256 --FTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELF 309
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+ RN+ SW ++++GYA +G + EA+ +F+ MP+++ +SW AMLA Y++ +E L
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
M + + +++ +L+ CA ++ ++ G ++HG + R Y FV NALL MY
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFE 481
KCGN+ AR F +M + RD VSWN ++ GYAR G +EA+ F M+ T+P T
Sbjct: 430 KCGNMEDARNAFEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 482 TLLAACANISSLEQG 496
+LAAC++ +E+G
Sbjct: 489 GVLAACSHSGLVEKG 503
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 26/344 (7%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V N + Y + G L++A+ +FD MP++D SW AML AY+Q G T
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
L+LF++M G N+ +A VL + A+ L QLHG +++ G+ + ++L+
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC M DAR F++++ ++ VSWN ++ Y G GKEA+ +F M +P + T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYVKCGRLEDARGL 301
L ACS + G+ G+ D V + ++ + GRL +A L
Sbjct: 488 VGVLAACS-----HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 302 L-DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLW 357
+ D P E + W +++ I R A E E+ N + + Y S W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++A +M + + + +V G S I++ +VH F
Sbjct: 603 RDARKMRVMMEE--RGVKKVP---------GFSWIEVQNKVHTF 635
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 149/342 (43%), Gaps = 29/342 (8%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E +I ++ + +GR+ +A LF MP R+ ++NAMLAGY+ + L
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSAN----GRLPLAAS 90
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH-RNDYSSNIFVSNALLDMYRKCG 425
+ + D + +L+ A S + + + + R+ + N+ +S+ + G
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHG 145
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLL 484
+ AR +F ++ +D VSWN +L Y R G+ EEA F S +W+ ++ L+
Sbjct: 146 LVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV----ISWNALM 200
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ + + +++ +VV +V Y + + A R+F + DV
Sbjct: 201 SGYVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+++ G+ N EA VF M + + ++++ ++ A I + A + F+ M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
C+ + + M+ Y + G ++E + + MP V
Sbjct: 313 PCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 349
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 187/654 (28%), Positives = 306/654 (46%), Gaps = 45/654 (6%)
Query: 32 GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
G+ P+ + L A+L CAS + E L LV + T F+ R I
Sbjct: 8 GNASQARPIRHHLLAYL-DACASRAHLAE---LHGRLVRAHLTSDSFVAGRLIALLASPA 63
Query: 92 NLDD---ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
D AR +FD M + + WN M+ Y+ P L +F +M GVS + T A
Sbjct: 64 ARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAA 123
Query: 149 VLRSSAEELEL---GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
V+ +SA L +H L+ + GF +V + S LV+ YG + +A ++F+++
Sbjct: 124 VVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMY 183
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ VSW ++ G+ + + M +M E I P T + L AC + EG
Sbjct: 184 ERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRW 243
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ + K E D + +L MY KCG L DA
Sbjct: 244 VYNQVGKFGIEADVDIRNALISMYTKCGCLSDAL-------------------------- 277
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
E F MP R SWN ++ G+ ++ KEAL M D +TL +L+
Sbjct: 278 -----EAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSA 332
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L E++ G VH +I N + ++N+L++MY KCG++ +A F M+ ++D VS
Sbjct: 333 CAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT-KKDVVS 391
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W ++ GY + Q A F EM+ E + +LL+AC+ + +L++G++IH ++
Sbjct: 392 WTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIE 451
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
++ ALV++Y KC C++ A +F++ + N+MI G N G+EA+E
Sbjct: 452 EMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVE 511
Query: 565 VFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F +++ + KPD IT +L AC H G V L++F M G++P EHY C++ L
Sbjct: 512 LFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMS-SLGVVPDTEHYGCIVDL 570
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + E F+ +MP P + + CR + LG+ + + + P
Sbjct: 571 LGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAP 624
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 186/420 (44%), Gaps = 37/420 (8%)
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
++F RP+ L AC+ S ++HG +++ D V G L
Sbjct: 4 LYFHGNASQARPIRHHLLAYLDACA---SRAHLAELHGRLVRAHLTSDSFVAGRLI---- 56
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
LL P R+ +R AR++F+ M + N WN M+ G
Sbjct: 57 ---------ALLASPAARH---------------DMRYARKVFDGMAQPNAFVWNCMIRG 92
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA---GLSEIKMGKEVHGFIHRNDY 407
Y+ ++AL MR+ D T+ +++ A GL G +H + R +
Sbjct: 93 YSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGF 152
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+S++FV + L++ Y ++ A F +M +R D VSW ++++ A+ G ++ + S
Sbjct: 153 TSDVFVMSGLVNYYGAFRSVEEASKVFEEMYER-DVVSWTSMISACAQCGHWDKVLKMLS 211
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EMQ E P+K T +LL+AC ++++G+ ++ V + E +V R AL+ +YTKC
Sbjct: 212 EMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCG 271
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
CL A+ F+ + N++I GF N +EAL +F M G+ PD IT +L
Sbjct: 272 CLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLS 331
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC G ++ + ++ GI +I +Y + G M E M V
Sbjct: 332 ACAQLGELRKGMHVHSYIK-DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVV 390
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/592 (29%), Positives = 285/592 (48%), Gaps = 45/592 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQIT 145
YGKCG++++AR +F+ + SWN MLGAY NG + LELF M + G+ A+++T
Sbjct: 2 YGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVT 61
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ + + L KQ H V+ G ++IL+S+L++ YG+C +AR++FD I
Sbjct: 62 FVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIP 121
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
KN V WNV++ Y G+ EA+ +++ M +++P TF N L AC+ S G
Sbjct: 122 VKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHACTLES----GRL 174
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IH ++ E D V +L M+ KCG L DA
Sbjct: 175 IHQDVVSAGLERDKFVGNALVNMFGKCGSLSDA--------------------------- 207
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ +F+ + R+VISWNA+++ Y + KEA + M K + VT +L
Sbjct: 208 ----KRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPA 263
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C+ L +++ E+H + + V N L+ Y K +L + F +M +RR VS
Sbjct: 264 CSSLEQLR---EIHQELADQGLEQDEQVGNTLITAYNKF-SLEDSVAVFERM-KRRSVVS 318
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W ++ G G A+ + EM E RP L AC ++ +L +G++IH V
Sbjct: 319 WTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACTSVENLAEGRKIHRLVE 378
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+V A+V +Y KC A VF+ + V NS+I + + +AL+
Sbjct: 379 GTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLIGAYAQHGHATDALK 438
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
++ M+ G +PD +T L AC H G + A +F+ M Y + H+ C++ L+
Sbjct: 439 LYERMELSGTRPDGVTLLCALFACSHLGLLDRAREFYSGMVEDYQVEAVPAHFGCLVDLF 498
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
CR G++ E E+ + MP P + + + C+ + G WAA + +EL+
Sbjct: 499 CRAGWIDEAEELIASMPVRPHISAWTALLNACKAHNDMERGAWAACKAHELD 550
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 249/516 (48%), Gaps = 49/516 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ ++ E ++ S V + L + + YG+CG+ ++AR +FD +P ++ W
Sbjct: 69 CSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCW 128
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N M+ AY QNG LEL+ DMN + +++T+ NVL + LE G + +H +V
Sbjct: 129 NVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHACT--LESG--RLIHQDVVS 181
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + ++LV+ +GKC ++DA+R+FD I ++ +SWN ++ Y+ G+ KEA +
Sbjct: 182 AGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFEL 241
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M + ++P + T+ + L ACS L E IH + E D+ V +L Y K
Sbjct: 242 FKRMDKAGLQPNSVTYLSLLPACSSLEQLRE---IHQELADQGLEQDEQVGNTLITAYNK 298
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
LED+ + ++ R+++SWT ++ G G A +L+ EM V
Sbjct: 299 FS-LEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP-------- 349
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
D V L L+ C + + G+++H + +++
Sbjct: 350 -----------------------DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDV 386
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
FV+ A+++MY KCG A F M + +WN+++ YA+ G + +A+ + M+
Sbjct: 387 FVATAVVNMYGKCGKFAEAEAVFQGM-KTTTVATWNSLIGAYAQHGHATDALKLYERMEL 445
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GALVEVYTKCCCL 528
TRP T L AC+++ L++ ++ + ++ + Y++ V G LV+++ + +
Sbjct: 446 SGTRPDGVTLLCALFACSHLGLLDRAREFYSGMVED-YQVEAVPAHFGCLVDLFCRAGWI 504
Query: 529 EYAIRVFKESSSLDVIICNSMILGFC--HNERGREA 562
+ A + I + +L C HN+ R A
Sbjct: 505 DEAEELIASMPVRPHISAWTALLNACKAHNDMERGA 540
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 2/127 (1%)
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM-KKEGIKPDHI 579
+Y KC +E A VF N M+ +C+N G +ALE+F M GI+ D +
Sbjct: 1 MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF AC G+++ QF S + G+ L ++ +Y R G +E +R
Sbjct: 61 TFVTAATACSLVGSLEEGKQFH-SRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDR 119
Query: 640 MPFNPTV 646
+P V
Sbjct: 120 IPVKNVV 126
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/646 (28%), Positives = 313/646 (48%), Gaps = 47/646 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P SY+ Y+ + CAS + + + +++ ++ VF+ ++ Y KCG++ +A
Sbjct: 248 KPDSYT-YSSVLAACASLEKLRFGKVVQARVIK-CGAEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F +P SW ML YT++ LE+F +M HSGV N T +V+ +
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF---DDIQNKNAVSWNV 214
+ + Q+H + K GF + + ++L+ Y K + + ++F DDIQ +N V NV
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ + + +A+ +F +ML+E +R F+ + L S L G Q+HG +K
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D V SL +Y KCG LE E+ +LF
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLE-------------------------------ESYKLFQ 509
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+P ++ W +M++G+ +EA+ M D+ TL +L VC+ +
Sbjct: 510 GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR 569
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GKE+HG+ R + + +AL++MY KCG+L+ AR Y D VS +++++GY+
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR-QVYDRLPELDPVSCSSLISGYS 628
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFV--IRNCYEIN 511
+ G ++ F +M F ++L A A G Q+H ++ I C E +
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V +L+ +Y+K ++ + F + + D+I ++I + + + EAL+V+ LMK+
Sbjct: 689 V--GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
+G KPD +TF G+L AC H G V+ + +SM YGI P+ HY CM+ R G ++
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
E E F+N M P + + C+ +G LG+ AA++ EL P
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 273/582 (46%), Gaps = 42/582 (7%)
Query: 64 LESNLVTFYPTP-PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
L+++L+ Y P VFL + Y G++ DA LFD +P+ D S N M+ Y Q+
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+L F M+ G AN+I+Y +V+ + + S+ + +K G+ ++ES
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+D + K + DA ++F D + N WN I+ L N +F +M +P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
++T+++ L AC+ L G + +IK CG
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIK-------------------CG--------- 281
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
++ T+IV YA G + EA E+F+ +P +V+SW ML+GYT+S AL+
Sbjct: 282 ----AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
MR + +I+ T+ +++ C S + +VH ++ ++ + + V+ AL+ MY
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
K G++ + F + + + N ++T +++ + +A+ F+ M E R +F+
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+LL+ + L GKQ+H + +++ +++ +L +Y+KC LE + ++F+
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 542 DVIICNSMILGFCHNERG--REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D SMI GF NE G REA+ +F M +G PD T +L C ++ +
Sbjct: 515 DNACWASMISGF--NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ GI ++ ++ +Y + G +K +R+P
Sbjct: 573 -IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 197/466 (42%), Gaps = 55/466 (11%)
Query: 4 NAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARK 63
N ++ S+S + T+ + L++DE SL + L C + V
Sbjct: 419 NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD--CLNLGKQVHGYT 476
Query: 64 LESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
L+S LV +F L Y KCG+L+++ LF +P +D W +M+ + + G
Sbjct: 477 LKSGLVLDLTVGSSLFTL------YSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+ + LF +M G S ++ T A VL + L K++HG ++ G + L S
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+LV+ Y KC + AR+++D + + VS + ++ Y G ++ ++F M+
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+F ++ L A + G Q+H I KI + V SL MY K G ++D
Sbjct: 651 DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAF 710
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
Q + ++I+WT++++ YA G+ EA +++N M E+ G+
Sbjct: 711 SQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK----------GFKP--------- 751
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCA--GLSEIKMGKEVHGFIHRNDYSSNIFVSN----- 415
D+VT +L+ C+ GL E + H N + +
Sbjct: 752 ------------DKVTFVGVLSACSHGGLVE-------ESYFHLNSMVKDYGIEPENRHY 792
Query: 416 -ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++D + G LR A + M + D + W +L G+ E
Sbjct: 793 VCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/618 (27%), Positives = 297/618 (48%), Gaps = 39/618 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ + + + YG G DAR +FD++PE D W +L Y N ++ + +
Sbjct: 88 ISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMK 147
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G + I ++ L++ E +L K++H IVK NV+L + L+D Y KC +
Sbjct: 148 HGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVL-TGLLDMYAKCGEIKS 206
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+ ++F+DI +N V W ++ Y+ +E +V+F +M + +T+ + AC+
Sbjct: 207 SYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTK 266
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + ++G HG +IK E ++ SL +MYVKCG
Sbjct: 267 LRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGD---------------------- 304
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
I AR +FNE +++ W AM+ GYT + EAL M +
Sbjct: 305 ---------ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNC 355
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT+ +L+ C + +++G+ +HG I + +N V+NAL+ MY KC R A+ + +
Sbjct: 356 VTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAK-YVF 412
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
+M +D V+WN++++G+++ G EA+ F M E+ P+ T +L +ACA++ SL
Sbjct: 413 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLA 472
Query: 495 QGKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G +H + ++ + +V AL++ Y KC E A +F + I ++MI G
Sbjct: 473 IGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGG 532
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + +LE+F M K+ KP+ TF +L AC H G V ++F SM Y P
Sbjct: 533 YGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTP 592
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+HY CM+ + R G +++ D + +MP P V C + LGE +++
Sbjct: 593 STKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM 652
Query: 673 NELNPWAPFQFKITTNRF 690
+L+P + + +N +
Sbjct: 653 LDLHPDDASYYVLVSNLY 670
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 234/458 (51%), Gaps = 37/458 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+++ + C + + +K+ +V P+ +L ++ Y KCG + + +F+++
Sbjct: 156 VFSKALKACTEVQDLDNGKKIHCQIVKV-PSFDNVVLTGLLDMYAKCGEIKSSYKVFEDI 214
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
R+ W +M+ Y +N L LF M + V N+ TY ++ + + L K
Sbjct: 215 TLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGK 274
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
HG ++K G + L +SL+D Y KC +++ARR+F++ + + V W ++ Y G
Sbjct: 275 WFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 334
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ EA+ +F KM I+P T A+ L C + + G IHG+ IK+ D V
Sbjct: 335 SVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVAN 393
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY KC + DA+ + + E++I++W SI+SG++ +G I EA LF+ M +V+
Sbjct: 394 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMP 453
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+ VT+ + + CA L + +G +H +
Sbjct: 454 -------------------------------NGVTVASLFSACASLGSLAIGSSLHAYSV 482
Query: 404 RNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + SS++ V ALLD Y KCG+ SAR+ F + + ++ ++W+A++ GY ++G ++
Sbjct: 483 KLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTI-EEKNTITWSAMIGGYGKQGDTKG 541
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
++ F EM + + +P++ TF ++L+AC++ + +GK+
Sbjct: 542 SLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKK 579
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 208/437 (47%), Gaps = 37/437 (8%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q HG++ G G++ + + LV YG DAR +FD I + W VI+R Y +
Sbjct: 73 RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLN 132
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
E + + +++ + F+ AL AC+ + G +IH I+K+ D+VVL
Sbjct: 133 NESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVL 191
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
L +MY KCG ++ + + + RN++ WTS+++GY + E LFN M E +V+
Sbjct: 192 TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVL 251
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
++ T G ++ C L + GK HG +
Sbjct: 252 G-------------------------------NEYTYGTLVMACTKLRALHQGKWFHGCL 280
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
++ + + +LLDMY KCG++ +AR F + S D V W A++ GY G EA
Sbjct: 281 IKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH-VDLVMWTAMIVGYTHNGSVNEA 339
Query: 463 MTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVE 520
++ F +M +P+ T ++L+ C + +LE G+ IH I+ ++ NV ALV
Sbjct: 340 LSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVA--NALVH 397
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC A VF+ S D++ NS+I GF N EAL +F M E + P+ +T
Sbjct: 398 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVT 457
Query: 581 FHGILLACIHEGNVKLA 597
+ AC G++ +
Sbjct: 458 VASLFSACASLGSLAIG 474
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/617 (28%), Positives = 300/617 (48%), Gaps = 34/617 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
FL+ + + Y G L++AR +FDE+P+ NAM+ Y QN +EL M+
Sbjct: 90 FLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRC 149
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + T L++ L+ + ++ GL V +G G L SS+++ K + A
Sbjct: 150 HLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCA 209
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+ F + K+ V WNV++ ++ G +E +F ML I P T + + +C +
Sbjct: 210 QFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEM 269
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G +HG ++ D VL +L +MY K
Sbjct: 270 RNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCK-------------------------- 303
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SG + AR +F MP RN++SWN M++GY ++ L E L + D
Sbjct: 304 -----SGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSG 358
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ ++ +C+ +++ GK +HGFI+R N+ + A++D+Y KCG+L A F +M
Sbjct: 359 TVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERM 418
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+ ++ +SW A+L G A+ G + +A+ F +MQ E + T +L+ C + L +G
Sbjct: 419 -KNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREG 477
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES-SSLDVIICNSMILGFCH 555
+ +H + R + VV AL+++Y KC + A VFK + DVI+ NSMI G+
Sbjct: 478 RSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGM 537
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G +AL V+ M +EG++P+ TF +L AC H G V+ + F +M + P +
Sbjct: 538 HGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDK 597
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
Y C++ L R G +++ E+ +N+MPF PT +L + + C + LG A RL L
Sbjct: 598 LYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSL 657
Query: 676 NPWAPFQFKITTNRFDR 692
P + +N + +
Sbjct: 658 ESRNPSIYITLSNIYAK 674
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 194/426 (45%), Gaps = 33/426 (7%)
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+I+ G+ L + LV AY + +AR++FD+I V N +V YL +
Sbjct: 79 IIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYND 138
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ + M R + ++T AL AC FL GM++ G+ + G + S+
Sbjct: 139 CIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILN 198
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
VK G + A+ Q E++++ W ++ G+ G RE LF +M +
Sbjct: 199 FLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKI------ 252
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ VT+ ++ C + + GK +HGF+
Sbjct: 253 -------------------------EPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGM 287
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S + V L+DMY K G++ SAR W ++ R+ VSWN +++GY + G E + F
Sbjct: 288 SRDTRVLTTLIDMYCKSGDVESAR-WIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQ 346
Query: 468 EMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
++ + T +L+ C+ + L+ GK +H F+ R ++N+V A+V++Y KC
Sbjct: 347 KLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCG 406
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
L YA VF+ + +VI +M++G N R+AL++F M+ E + + +T ++
Sbjct: 407 SLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVY 466
Query: 587 ACIHEG 592
C G
Sbjct: 467 CCTLLG 472
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 173/341 (50%), Gaps = 9/341 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP + ++ + L Q C + + + + ++ F + +L I+ Y K G+++ AR
Sbjct: 253 EPSAVTMIS-LIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESAR 311
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F+ MP R+ SWN M+ Y QNG TL LF + V + T ++++ +
Sbjct: 312 WIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTA 371
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+L K LHG I +RG N++L +++VD Y KC + A +F+ ++NKN +SW ++
Sbjct: 372 DLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLV 431
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G+ ++A+ +F +M E + T + ++ C+ L EG +H + + F
Sbjct: 432 GLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFAS 491
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQP-DERNIISWTSIVSGYAISGRIREARELFNEM 336
+ VV+ +L +MY KC ++ A + +++I + S++SGY + G +A +++ M
Sbjct: 492 EVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRM 551
Query: 337 P----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+ N ++ ++L+ + S L +E + L + KD
Sbjct: 552 NREGLQPNESTFVSLLSACSHSGLVEEG---IALFQNMVKD 589
>gi|297722397|ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group]
gi|53749418|gb|AAU90276.1| PPR repeat containing protein [Oryza sativa Japonica Group]
gi|108710059|gb|ABF97854.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|215707171|dbj|BAG93631.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674740|dbj|BAH92290.1| Os03g0644100 [Oryza sativa Japonica Group]
Length = 616
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 282/546 (51%), Gaps = 40/546 (7%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R++ + V + F+ N I Y + + DAR +FDEMPER SW AM+ Y +
Sbjct: 100 RRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKL 159
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
G G + LF DM SGV N +T+ +L+S E + + +Q+H IVK G+ NVI++
Sbjct: 160 GHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW-SNVIVD 218
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S++ Y +C + A +FD + ++ +SW ++ Y+ G+G +A+ MF +M+ E R
Sbjct: 219 SAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMVSEGFR 278
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P FT + L AC+ + G Q+H ++K ++ D + +L MY +CG + D
Sbjct: 279 PNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFD---- 334
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
A+ +F+ MP RN I+W +M++GY +S ++A+
Sbjct: 335 ---------------------------AQAVFDMMPRRNTITWTSMISGYAQSGHGEKAI 367
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
M+ ++ +T+ +L+ C L +GKE+H I +N N+ + + L+ Y
Sbjct: 368 LLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFY 427
Query: 422 RKCGNLR-SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
KCG +ARI + RD +SW A+++GY G + EA+ S +M W+ +P+ +T
Sbjct: 428 CKCGEYTYAARI--LEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYT 485
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+ + L ACA + +L+ G++IH FV + NV +L+++Y +C ++ A VF
Sbjct: 486 YSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMP 545
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL-AL 598
+++ +I GF N EAL+ LM++EG + D +L +C G+++ ++
Sbjct: 546 EHNLVTWKVIITGFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSC---GDLQWKSI 602
Query: 599 QFFDSM 604
F DS+
Sbjct: 603 SFSDSV 608
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 169/342 (49%), Gaps = 31/342 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA KA+ ++L ++ + + + + Y +CG + DA+ +FD MP R+
Sbjct: 287 VLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRN 346
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W +M+ Y Q+G + + LF M V N +T +L + + K+LH
Sbjct: 347 TITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHA 406
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K N+ + S+LV Y KC T A R+ + + +++A+SW ++ Y G+ E
Sbjct: 407 QIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHNVE 466
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ ML + ++P +T+++AL AC+ L + G +IHG + K + V SL +
Sbjct: 467 ALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLID 526
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY++CG++++AR + D E N+++W I++G+A +G
Sbjct: 527 MYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNG----------------------- 563
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
L +EAL +++LM++ ++D L +L C L
Sbjct: 564 --------LCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDL 597
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 13/290 (4%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
L L C G ++ VH R+ S FV+N L+ Y + + AR F +M
Sbjct: 85 ALASSLRDCGGADGVR---RVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEM 141
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+R VSW A++ Y + G E + F +M + + TF LL +C + G
Sbjct: 142 PER-SVVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLG 200
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+Q+HC +++ + NV+ A+ Y +C + A +F + + DVI +MI + +
Sbjct: 201 QQVHCCIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQH 259
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G +AL +F M EG +P+ T +L AC E V+ Q ++ K +
Sbjct: 260 GHGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAV-LKKMYKNDIHI 318
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
++ +Y R G + + + + MP T+ I +GYA G
Sbjct: 319 GSALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMI------SGYAQSGH 362
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 290/599 (48%), Gaps = 68/599 (11%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+A++L++S + + +H I+K+G V L ++L+ Y K + A +FD++
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 206 NKNAVSWNVIVRRYLVAGNGK-------------------------------EAVVMFFK 234
K+ SWN ++ Y GN + A+ MF K
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M+ E + P FT +N L +C+ + G +IH ++K+ V SL MY KCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
A+ + D+ +NI +W +++S Y SG+ A F +MP+R+++SWN+M++GY++
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 355 LLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
EAL F ++ + + D TL IL+ CA L ++ +GK++H +I R + ++ V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 414 SNAL---------------------------------LDMYRKCGNLRSARIWFYQMSQR 440
NAL LD Y K GN++ AR F ++ +
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKL-RD 371
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
RD V+W A++ GY + G +A+ F M E P+ +T +L+ ++++ LE GKQI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGFCHNER 558
H I+ AL+ +Y K + A RVF + +++ SMI+ +
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EA+ +F M G+KPDHIT+ G+L AC H G V+ ++++ M + I P L HY
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI LY R G ++E F+ MP P + C+ + A L + AA RL ++P
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDP 610
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/574 (28%), Positives = 277/574 (48%), Gaps = 70/574 (12%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARK---------------LESNLVTFY--------- 72
+ P S +AH+ Q K R L +NL+TFY
Sbjct: 5 NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFA 64
Query: 73 -------PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
P F N I Y K GN + +R L EMP+ D SW A++ Y Q G
Sbjct: 65 HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ +F M V +Q T +NVL S A L + +++H +VK G V + +SL+
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK------------------- 226
+ Y KC A+ +FD + KN +WN ++ Y+ +G +
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244
Query: 227 ------------EAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
EA+ +F KML E ++P NFT A+ L AC+ L G QIH I++
Sbjct: 245 MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ--PDERNIISWTSIVSGYAISGRIREARE 331
+ E V +L MY K G +E AR +++ NII++TS++ GY G ++ ARE
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+FN++ +R+V++W AM+ GY ++ LW +AL+ LM + + TL +L+V + L+
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ GK++H + SS V+NAL+ MY K GN+ A+ F + +++ VSW +++
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
A+ G +EA+ F M +P T+ +L+AC ++ +EQG++ + ++ +EI
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYN-MMTEVHEI 543
Query: 511 NVVCR--GALVEVYTKCCCLEYAIRVFKESSSLD 542
++++Y + L+ A +F ES ++
Sbjct: 544 EPTLSHYACMIDLYGRAGLLQEAY-LFIESMPIE 576
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 291/548 (53%), Gaps = 37/548 (6%)
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
FL N SG+ ++ YA+++ SS + +L +Q+H ++ G + L + L+ A
Sbjct: 11 FLYTN-SGIHSDSF-YASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHASSS 65
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
+T AR++FDD+ WN I+R Y + ++A++M+ KM + P +FTF +
Sbjct: 66 YGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHL 125
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC LS G +H + ++ FE D V L +Y KC RL AR
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCAR----------- 174
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
++ G +PER ++SW A+++ Y ++ EAL+ MRK
Sbjct: 175 ----TVFEGLP--------------LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D V L +LN L +++ G+ +H + + + + +L MY KCG + +A
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
+I F +M + + + WNA+++GYA+ G +++A+ F EM + RP + + ++ACA
Sbjct: 277 KILFDKM-KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ SLEQ + + +V R+ Y +V AL++++ KC +E A VF + DV++ ++M
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I+G+ + + REA+ ++ M+++G+ P+ +TF G+L+AC H G V+ FF+ M +
Sbjct: 396 IVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADHK 454
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I PQ +HY C+I L R G++ + + + MP P V + + C+K+ + LG++AA
Sbjct: 455 INPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAA 514
Query: 670 RRLNELNP 677
++L ++P
Sbjct: 515 QQLFSIDP 522
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 229/459 (49%), Gaps = 38/459 (8%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S S YA L SS + R++ + L+ FL+ + I G++ AR +F
Sbjct: 20 SDSFYASLID---SSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVF 76
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D++P WNA++ Y++N L ++ M + VS + T+ ++L++ L
Sbjct: 77 DDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQ 136
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRR 218
+ + +H + + GF +V +++ L+ Y KC + AR +F+ + + VSW IV
Sbjct: 137 MGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSA 196
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G EA+ +F +M + D++P + L A + L +G IH ++K+ E +
Sbjct: 197 YAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE 256
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+L SL MY KCG++ A+ L D+ N+I W +++SGYA +G ++A +LF+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMIN 316
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V D +++ ++ CA + ++ + +
Sbjct: 317 KDVRP-------------------------------DTISITSAISACAQVGSLEQARWM 345
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
++ R+DY ++F+S+AL+DM+ KCG++ AR F + RD V W+A++ GY GQ
Sbjct: 346 DEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF-DRTLDRDVVVWSAMIVGYGLHGQ 404
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+ EA++ + M+ + P+ TF LL AC + + +G
Sbjct: 405 AREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREG 443
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 159/309 (51%), Gaps = 4/309 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++ + HL + C + R + + + VF+ N I Y KC L AR
Sbjct: 117 PDSFT-FPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCART 175
Query: 99 LFD--EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ +PER SW A++ AY QNG P LE+F M V + + +VL +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCL 235
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+L + +H ++K G L SL Y KC + A+ +FD +++ N + WN ++
Sbjct: 236 QDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G K+A+ +F +M+ +D+RP + +A+ AC+ + S + + + + D+
Sbjct: 296 SGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYR 355
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + +L +M+ KCG +E AR + D+ +R+++ W++++ GY + G+ REA L+ M
Sbjct: 356 DDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAM 415
Query: 337 PERNVISWN 345
ER+ + N
Sbjct: 416 -ERDGVHPN 423
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 173/382 (45%), Gaps = 29/382 (7%)
Query: 20 PTPSKTL---TKTISGHLKSDEPV-SYSLYAHLFQL-----CASSKAIVEA--------- 61
P P +T+ T +S + ++ EPV + +++ + ++ C + +++ A
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQ 240
Query: 62 -RKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
R + ++++ T P L++ Y KCG + A+ LFD+M + WNAM+ Y
Sbjct: 241 GRSIHASVMKMGLETEPDLLISLNT-MYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+NGF ++LF +M + V + I+ + + + A+ L ++ + + + + +V
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVF 359
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ S+L+D + KC + AR +FD +++ V W+ ++ Y + G +EA+ ++ M R+
Sbjct: 360 ISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDG 419
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ P + TF L AC+ EG + + ++ + G L+ A
Sbjct: 420 VHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAY 479
Query: 300 GLLD-QPDERNIISWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRS 354
++ P + + W +++S + A++LF+ P N + + Y +
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPS-NTGHYVQLSNLYAAA 538
Query: 355 LLWKEALDFVFLMRKT--TKDI 374
LW + M++ KD+
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDV 560
>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
Length = 644
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 182/666 (27%), Positives = 312/666 (46%), Gaps = 71/666 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
L + C+ SK + R++ +++ + P PV + N I+ Y KCG+L DA +F ++ E
Sbjct: 1 LLRQCSRSKDLARGRQIHASIARSSAPQDPV-VGNWLIQMYLKCGSLIDASQVFYQLLET 59
Query: 107 ---DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+ +W A++ AY +NG + LF M G S ++IT + + L K
Sbjct: 60 SVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGK 119
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H + +V+L SSL+ YGKC +++A MF ++ N V+WN ++ ++
Sbjct: 120 KIHAYLSCNS---DVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHD 176
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ A+ ++++ML+ P TF L A S L S G +H +++ E D VV
Sbjct: 177 RVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQT 236
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY KC G + EA E+F+ MP +VI
Sbjct: 237 ALVNMYGKC-------------------------------GSVVEAVEVFDRMPRHDVIL 265
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W+A+++ + ++E+L M+ + VTL +L+ C G ++ GK +H +
Sbjct: 266 WSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVV 325
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------------- 440
Y ++ V NA++ MY KCG+L A F+++ +R
Sbjct: 326 EAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRCGSFGKAR 385
Query: 441 --------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
RD V+WN +++ + +++ F +M E T P K T T+L CA++
Sbjct: 386 DLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLP 445
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L++GK I ++ N + A++ +Y KC + A R+F D + N++I
Sbjct: 446 ALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSWNALIG 505
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ RGR A ++F M+ EG PD +TF IL C H G + A+++F MR Y +
Sbjct: 506 AYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVE 565
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
+ HY C++ L R G + E E+ +MP + + C+ +G G+ AA R
Sbjct: 566 AETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAER 625
Query: 672 LNELNP 677
L EL+P
Sbjct: 626 LVELDP 631
>gi|297810463|ref|XP_002873115.1| EMB175 [Arabidopsis lyrata subsp. lyrata]
gi|297318952|gb|EFH49374.1| EMB175 [Arabidopsis lyrata subsp. lyrata]
Length = 896
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 172/617 (27%), Positives = 309/617 (50%), Gaps = 9/617 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
N I Y K G +A +F + S+ A++ +++ L++F M +G V
Sbjct: 118 NALISTYLKLGFPREAFLVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGIV 177
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT--DA 197
N+ T+ +L + + Q+HGLIVK GF +V + +SL+ Y K + D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVGNSLMSLYSKDSGSSCDDV 237
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSF 256
++FD+I +++ SWN ++ + G +A +F++M R E + FT + L +C+
Sbjct: 238 LKLFDEIPHRDVASWNTVISSLVKEGKSHKAFNLFYEMNRVEGLGVDCFTLSTLLSSCTD 297
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S G ++HG I+I + V +L Y K G ++ L + ++ +++T +
Sbjct: 298 SSDLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFGDMKKVESLYEMMMVQDAVTFTEM 357
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y G + A E+F + E+N I++NA++AG+ R+ +AL M + ++
Sbjct: 358 ITAYMAFGMVDSAVEIFENITEKNTITYNALMAGFCRNGHGLKALKLFTEMLQRGVELTD 417
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L ++ C +SE ++ +++HGF + N + ALLDM +C + A F Q
Sbjct: 418 FSLTSAVDACGLVSEKRVSEQIHGFCIKFGCLLNPCIQTALLDMCTRCERMADAEEMFEQ 477
Query: 437 MSQRRDKV-SWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSL 493
D+ + ++L GYAR G ++A++ F + E + + +LA C +
Sbjct: 478 WPSNLDRSKATTSILGGYARNGLPDKALSLFHRTLCEEELFLDEVSLTLILAVCGTLGFR 537
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E G QIHC+ ++ Y +V +L+ +Y+KCC + AI+VF DV+ NS+I +
Sbjct: 538 EMGYQIHCYALKAGYFSDVCLGNSLISMYSKCCDSDDAIKVFNTMQEHDVVSWNSLISCY 597
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA--LQFFDSMRCKYGII 611
G EAL ++ M +E IKPD IT ++ A + + KL+ F SM+ Y I
Sbjct: 598 ILQRNGNEALALWSRMNEEEIKPDMITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY +++ +G ++E ED +N MPF P V +LR + D CR + ++ + A+
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPFQPEVSVLRALLDSCRVHSNTSVAKRVAKL 717
Query: 672 LNELNPWAPFQFKITTN 688
+ P P ++ + +N
Sbjct: 718 VLSTKPENPSEYILKSN 734
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L N I Y KC + DDA +F+ M E D SWN+++ Y L L+ MN
Sbjct: 556 VCLGNSLISMYSKCCDSDDAIKVFNTMQEHDVVSWNSLISCYILQRNGNEALALWSRMNE 615
Query: 137 SGVSANQITYANVLRS 152
+ + IT V+ +
Sbjct: 616 EEIKPDMITLTLVISA 631
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 289/610 (47%), Gaps = 69/610 (11%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P V N+AI + + G + DA LF MP R ++NAML Y+ NG L L +
Sbjct: 36 PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG----RLPLAASL 91
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHG-LIVKRGFCGNVILESSLVDAYGKCMV 193
+ + +Y +L + A L ++ L + V+ NV++ S + +
Sbjct: 92 FRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHGL 146
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
++ AR FD K+AVSWN ++ Y+ G +EA +F D+ N
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN--------- 197
Query: 254 CSFLSSPYEGMQIHGVIIKID-FEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNII 311
+ +S + ++ D G DVV + + Y + G + +AR L D R++
Sbjct: 198 -ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+WT++VSGYA +G + EAR +F+ MPERN +SWNAM+A Y + + EA + +M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM---- 312
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
C N+ N +L Y + G L A+
Sbjct: 313 -------------PC----------------------RNVASWNTMLTGYAQAGMLEEAK 337
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM----QWETRPSKFTFETLLAAC 487
F M Q+ D VSW A+L Y++ G SEE + F EM +W R + F +L+ C
Sbjct: 338 AVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA---FACVLSTC 393
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
A+I++LE G Q+H +IR Y + AL+ +Y KC +E A F+E DV+ N
Sbjct: 394 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 453
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI G+ + G+EALE+F +M+ KPD IT G+L AC H G V+ + +F SM
Sbjct: 454 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 513
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
+G+ + EHY CMI L R G + E D + MPF P M + R + LG
Sbjct: 514 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 573
Query: 668 AARRLNELNP 677
AA ++ EL P
Sbjct: 574 AAEKIFELEP 583
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 221/435 (50%), Gaps = 20/435 (4%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
L ++L P P + N + +L DARGLFDEMP RD ++N M+ ++ +G
Sbjct: 87 LAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGL 146
Query: 124 PGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
F L VS N + A V EE GL R +VI +
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR--------GLFNSRTEW-DVISWN 197
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+ Y + M++AR +FD + ++ VSWN++V Y G+ EA +F D+
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV-- 255
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
FT+ + + E ++ + E + V ++ Y++ +++A+ L
Sbjct: 256 --FTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELF 309
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+ RN+ SW ++++GYA +G + EA+ +F+ MP+++ +SW AMLA Y++ +E L
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
M + + +++ +L+ CA ++ ++ G ++HG + R Y FV NALL MY
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFE 481
KCGN+ AR F +M + RD VSWN ++ GYAR G +EA+ F M+ T+P T
Sbjct: 430 KCGNMEDARNAFEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 482 TLLAACANISSLEQG 496
+LAAC++ +E+G
Sbjct: 489 GVLAACSHSGLVEKG 503
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 26/344 (7%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V N + Y + G L++A+ +FD MP++D SW AML AY+Q G T
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
L+LF++M G N+ +A VL + A+ L QLHG +++ G+ + ++L+
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC M DAR F++++ ++ VSWN ++ Y G GKEA+ +F M +P + T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYVKCGRLEDARGL 301
L ACS + G+ G+ D V + ++ + GRL +A L
Sbjct: 488 VGVLAACS-----HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 302 L-DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLW 357
+ D P E + W +++ I R A E E+ N + + Y S W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++A +M + + + +V G S I++ +VH F
Sbjct: 603 RDARKMRVMMEE--RGVKKVP---------GFSWIEVQNKVHTF 635
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 149/342 (43%), Gaps = 29/342 (8%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E +I ++ + +GR+ +A LF MP R+ ++NAMLAGY+ + L
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSAN----GRLPLAAS 90
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH-RNDYSSNIFVSNALLDMYRKCG 425
+ + D + +L+ A S + + + + R+ + N+ +S+ + G
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHG 145
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLL 484
+ AR +F ++ +D VSWN +L Y R G+ EEA F S +W+ ++ L+
Sbjct: 146 LVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV----ISWNALM 200
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ + + +++ +VV +V Y + + A R+F + DV
Sbjct: 201 SGYVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+++ G+ N EA VF M + + ++++ ++ A I + A + F+ M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
C+ + + M+ Y + G ++E + + MP V
Sbjct: 313 PCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 349
>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
Length = 730
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 171/644 (26%), Positives = 304/644 (47%), Gaps = 50/644 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ +K + + + +++ VF+ + Y KCG ++ AR +FD+MP +D SW
Sbjct: 110 CSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSW 169
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
AM+ A+ Q G + LE M + V N +T+ + + + L +++H ++
Sbjct: 170 TAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVID 229
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G G++ ++++LV Y K +A +F ++++N VSWN ++ + + A+ +
Sbjct: 230 LGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGL 289
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV--IIKIDFEGDDVVLGSLTEMY 289
F M E I+P + +F L ACS +IH + + D V SL Y
Sbjct: 290 FHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAY 349
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG LE A + + +N++SWT++++ Y G +A EL+++M +++
Sbjct: 350 AKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSI-------- 401
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
D V L ++ + + ++ + +++H + + +
Sbjct: 402 -----------------------QPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFML 438
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
I + NAL++MY +CG+L AR F + +R++ VSWNA++ Y + G EEA+ FSEM
Sbjct: 439 KIQIQNALINMYARCGSLEEARRVFDGI-ERKNLVSWNAMMGSYVQHGYDEEAIALFSEM 497
Query: 470 Q----------WETRPSKFTFETLLAACANISSLEQGKQIH---CFV---IRNCYEINVV 513
+ + P LL A A + L +G+ IH C V I NV
Sbjct: 498 KTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVT 557
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
ALV +Y +C + A F + D + +S++ G+ H+ A+ ++ M EG
Sbjct: 558 LGNALVSMYARCGSMGDASAAFHHMRARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEG 617
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
++PD +T+ IL +C H G + A FF SM + + +H++CM+ + R G++
Sbjct: 618 VQPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRA 677
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
ED V MPF P V + C+ +G A G AAR ++P
Sbjct: 678 EDVVRNMPFQPDVVAWNTLLGCCKVHGDAQRGAVAARNAVGISP 721
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 152/628 (24%), Positives = 285/628 (45%), Gaps = 66/628 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESN-LVTFYPTPPVFLLNRAIECYGKCG---NLDDARGLF 100
YA L + C S+++ + R++ + L T + V L N I+ Y KCG +L DAR +F
Sbjct: 1 YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D+MP++D SW+ ++ AY Q G + LF M+ V N++ + L + + +L
Sbjct: 61 DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMD---VEPNEMVIVSTLAACSGAKDLA 117
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +H I+ +V + ++L++ Y KC + AR +FD + +K+ VSW ++ +
Sbjct: 118 LGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFA 177
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G+ ++A+ M++ ++P TF A+ ACS G +IH +I + GD
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDIT 237
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +L MY K E+A + + ++RN +SW S+++ +A S + A LF+ M
Sbjct: 238 IQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEG 297
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ D V+ +L+ C+ ++ K +H
Sbjct: 298 I-------------------------------KPDDVSFLGVLSACSSTGCLRSCKRIHS 326
Query: 401 FIHRNDYSS--NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ S ++ V N+L+ Y KCG+L +A F ++ ++ VSW A+LT Y G
Sbjct: 327 QLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPG-KNVVSWTAMLTAYTFHGN 385
Query: 459 SEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+A+ + +M ++ +P ++ A + + + +++H V + + + + + A
Sbjct: 386 GSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNA 445
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK------- 570
L+ +Y +C LE A RVF +++ N+M+ + + EA+ +F MK
Sbjct: 446 LINMYARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAM 505
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY------------GIIPQLEHYE 618
+ G++ ++L C H G KLA RC + G +
Sbjct: 506 ESGLRSSPDCIMAVILLCAHAGLGKLA-----EGRCIHAELCAVNPEILAGSTTNVTLGN 560
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ +Y R G M + + M TV
Sbjct: 561 ALVSMYARCGSMGDASAAFHHMRARDTV 588
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 234/485 (48%), Gaps = 34/485 (7%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
+T+ G +++ + + C+S + + RK+ + ++ + + N + Y
Sbjct: 187 ETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMY 246
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
K + ++A +F M +R+ SWN+M+ A+ + + LF MN G+ + +++
Sbjct: 247 AKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFL 306
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCG--NVILESSLVDAYGKCMVMTDARRMFDDIQ 205
VL + + L K++H + ++ +E+SLV AY KC + A R+F I
Sbjct: 307 GVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIP 366
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
KN VSW ++ Y GNG +A+ ++ KM+ + I+P + N ++A S + +
Sbjct: 367 GKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARK 426
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H + F + +L MY +CG LE+AR + D + +N++SW +++ Y G
Sbjct: 427 LHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGY 486
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
EA LF+EM N AM +G S D + ++L
Sbjct: 487 DEEAIALFSEMKTGNS---KAMESGLRSS-------------------PDCIMAVILLCA 524
Query: 386 CAGLSEIKMGKEVHGFIHRND------YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
AGL ++ G+ +H + + ++N+ + NAL+ MY +CG++ A F+ M +
Sbjct: 525 HAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHM-R 583
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD V+W++++ GYA G +E A+ + +M E +P T+ ++L +C++ L Q +
Sbjct: 584 ARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQAR- 642
Query: 499 IHCFV 503
H FV
Sbjct: 643 -HFFV 646
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 174/647 (26%), Positives = 300/647 (46%), Gaps = 47/647 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + C++ + + +E + T L + + + +CG+L R +FD MP
Sbjct: 304 FSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 363
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R +W M+ AY Q G+ LEL+ M+ + + I +NVL++ + L +
Sbjct: 364 HRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLKNLEQGRA 420
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H I R F ++++++ LVD Y KC + +ARR FD + ++ +SW ++ Y
Sbjct: 421 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENF 480
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
G+EA+ +F M E + P + TF + ACS LSS G +H ++ D+ V +
Sbjct: 481 GREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA 540
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY K GR + AR +F+ +P + SW
Sbjct: 541 LVSMYSKFGR-------------------------------VDFARVVFDSIPVKRYPSW 569
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
ML T++ EAL+ + L C L ++ + +HG I
Sbjct: 570 RVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKS 629
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+D+ ++ +SN L+++Y KCG L AR+ F QM+++ ++VSW ++ GYA+ G+ EA+
Sbjct: 630 SDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEK-NEVSWTTMIGGYAQNGRPAEALE 688
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ M + +P+ F ++++CA++ +L +G+++H + + N V ALV +Y K
Sbjct: 689 LYKAM--DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAK 746
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L A F + D NSM + G + LE++ M +G++P+ IT +
Sbjct: 747 CGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSV 806
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV------- 637
L+AC H G ++ F+ M +GI P EHY CM L R G ++E E V
Sbjct: 807 LVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGES 866
Query: 638 -NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP--WAPF 681
+ V C+ + AA +L EL+P AP+
Sbjct: 867 GSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPY 913
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 283/618 (45%), Gaps = 57/618 (9%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPV--FLLNRAIECYGKCGN 92
+ D P S + + C S + + + + P L N + YGKCG+
Sbjct: 90 RMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGKCGS 149
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLR 151
L+DA +F + ++ SW AM+ AY QNG+ R +E+F DM G V + ITYA VL
Sbjct: 150 LEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLT 209
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ + +L ++H LI +G + ++ + L+D YGK DA ++F+ +++++ V
Sbjct: 210 ACSTLGDLETGMRIHALIRSKGV-ESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVI 268
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W + + G A+ +F KM E ++ N TF+ L ACS L G I I
Sbjct: 269 WTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIY 328
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ E DDV+ + ++ +CG L R + D+ R +++WT++++ Y G EA E
Sbjct: 329 TLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALE 388
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLILNVCAGL 389
L++ M DI D + L +L C+ L
Sbjct: 389 LYHCM------------------------------------DIEPDDIALSNVLQACSRL 412
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++ G+ VH I D+ ++ V L+DMY KCG+L AR F + RD +SW ++
Sbjct: 413 KNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGF-KARDVISWTSL 471
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+T Y+ EA+ F M+ E P+ TF T++ AC+ +SSL G+ +H V+ +
Sbjct: 472 ITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGH 531
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ ALV +Y+K +++A VF M++ N EALE++
Sbjct: 532 ISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSR 591
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII------PQLEHYECMIK 622
+ EG +P F L++C AL+ R +G+I P L ++
Sbjct: 592 IHLEGFRPGSPIFSAALVSCT-------ALEDVSRARAIHGVIKSSDFYPDLVLSNVLMN 644
Query: 623 LYCRYGYMKELEDFVNRM 640
+Y + G ++E ++M
Sbjct: 645 VYAKCGELEEARLVFDQM 662
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 177/642 (27%), Positives = 292/642 (45%), Gaps = 45/642 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA K + +K+ + L N + Y KCG+L+++R +F+ M
Sbjct: 2 FACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAME 61
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R +WN M+ AY Q+ F LE F M+ + IT+ +VL + +L K
Sbjct: 62 RRTVATWNTMITAYVQHDFFQEALEAFRRMD---APPSSITFTSVLGACCSPDDLETGKA 118
Query: 165 LHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+H I + IL++SLV YGKC + DA R+F I+ KNA SW ++ Y
Sbjct: 119 IHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQN 178
Query: 223 GNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G + A+ +F M+ E + P T+A L ACS L GM+IH +I E V
Sbjct: 179 GYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMVS 238
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
G L ++Y K G EDA + + +R+++ WT+ ++ G+ A ELF +M +
Sbjct: 239 TG-LIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGL 297
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ N VT IL C+ L + + GK +
Sbjct: 298 QANN-------------------------------VTFSKILAACSNLEDFETGKTIEDR 326
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I+ + + + +L ++ +CG+L R F +M R V+W ++ Y +RG S E
Sbjct: 327 IYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPH-RTVVTWTTMIAAYNQRGYSME 385
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
A+ + M E P +L AC+ + +LEQG+ +H + +E +++ + LV++
Sbjct: 386 ALELYHCMDIE--PDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDM 443
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC L A R F + DVI S+I + H GREALEVF M+ EG++P+ ITF
Sbjct: 444 YVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITF 503
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ AC ++ L + S G I ++ +Y ++G + + +P
Sbjct: 504 CTVIDACSRLSSL-LPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIP 562
Query: 642 FNPTVPMLRKIFDKCRKNGYA--TLGEWAARRLNELNPWAPF 681
P R + +NG++ L ++ L P +P
Sbjct: 563 VK-RYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPI 603
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 252/543 (46%), Gaps = 50/543 (9%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H EP +L +++ Q C+ K + + R + S + + P + + ++ Y KCG+
Sbjct: 391 HCMDIEPDDIAL-SNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGD 449
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L +AR FD RD SW +++ AY+ F LE+F M GV N IT+ V+ +
Sbjct: 450 LAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDA 509
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L + LH +V G + + ++LV Y K + AR +FD I K SW
Sbjct: 510 CSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSW 569
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
V++ G+ EA+ M+ ++ E RP + F+ AL +C+ L IHGVI
Sbjct: 570 RVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKS 629
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
DF D V+ L +Y KCG LE+AR + DQ E+N +SWT+++ GYA +GR EA EL
Sbjct: 630 SDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALEL 689
Query: 333 FNEMP-ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M + N I++ +++ CA L
Sbjct: 690 YKAMDVQPNFIAFVP-----------------------------------VISSCADLGA 714
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+ VH + +N + AL++MY KCG L AR F+ + D +WN++ T
Sbjct: 715 LVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAR-EFFDSTYCPDAGAWNSMAT 773
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK-QIHCFVIRNCYE 509
YA+ G + + + EM + +P+ T ++L AC+++ LE+ + + C V +
Sbjct: 774 AYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIA 833
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFK--------ESSSLDVIICNSMILGFC--HNERG 559
+ ++ + LE A +V K E++S + LG C HN+ G
Sbjct: 834 PTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWG 893
Query: 560 REA 562
R A
Sbjct: 894 RAA 896
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 224/493 (45%), Gaps = 46/493 (9%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+A VL + A ++ K++H I + + +L+++L++ Y KC + ++RR+F+ +
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + +WN ++ Y+ +EA+ F +M D P + TF + L AC G
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117
Query: 265 QIHGVI--IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
IH I + D+++ SL MY KCG LEDA + +N SWT++++ YA
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G R A E+F +M M + + D +T +
Sbjct: 178 NGYERRAIEVFGDM------------------------------MSEGRVEPDPITYAGV 207
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L C+ L +++ G +H I R+ + VS L+D+Y K G A + ++ + RD
Sbjct: 208 LTACSTLGDLETGMRIHALI-RSKGVESAMVSTGLIDLYGKWGFFEDA-LQVFESVRDRD 265
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
V W A + GQS A+ F +M+ E + + TF +LAAC+N+ E GK I
Sbjct: 266 VVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIED 325
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG-- 559
+ E + V + ++ ++ +C L +F V+ +MI + N+RG
Sbjct: 326 RIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAY--NQRGYS 383
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EALE++ M I+PD I +L AC N++ + + P L
Sbjct: 384 MEALELYHCMD---IEPDDIALSNVLQACSRLKNLEQGRAVHSRIASR-DFEPSLMVQTL 439
Query: 620 MIKLYCRYGYMKE 632
++ +Y + G + E
Sbjct: 440 LVDMYVKCGDLAE 452
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 187/408 (45%), Gaps = 47/408 (11%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
TFA L AC+ L G ++H I + D V+ +L +Y KCG LE++R + +
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
+ R + +W ++++ Y +EA E F
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAF-------------------------------- 88
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN--DYSSNIFVSNALLDMYRK 423
R+ +T +L C +++ GK +H I + ++ + N+L+ MY K
Sbjct: 89 --RRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLVTMYGK 146
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFE 481
CG+L A F+ + +R++ SW A++T YA+ G A+ F +M E R P T+
Sbjct: 147 CGSLEDAERVFHGI-RRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 205
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+L AC+ + LE G +IH + E +V G L+++Y K E A++VF+
Sbjct: 206 GVLTACSTLGDLETGMRIHALIRSKGVESAMVSTG-LIDLYGKWGFFEDALQVFESVRDR 264
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
DV+I + I ++ + ALE+F M+ EG++ +++TF IL AC + + +
Sbjct: 265 DVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIE 324
Query: 602 D---SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
D ++ +Y + Q + ++ L+ R G + + +RMP V
Sbjct: 325 DRIYTLGLEYDDVLQ----DGILSLHARCGSLVGTREMFDRMPHRTVV 368
>gi|255566945|ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536243|gb|EEF37895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 254/442 (57%), Gaps = 11/442 (2%)
Query: 163 KQLHGLIVKRG-----FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
KQ+H ++K G F + ++E ++ YG ++ A +F I N + WN I+R
Sbjct: 41 KQIHSQVIKTGLHNTHFALSKLIEFCVISPYGD---LSYALLLFKSIGKPNQIIWNNIIR 97
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
++ + A+ + M+ P +T+ L +C+ +SS +EG QIHG I+K+ F+
Sbjct: 98 GLSLSESPILAIQYYVDMISSGFTPNTYTYPFVLKSCARISSTHEGKQIHGQILKLGFDN 157
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL MYV+ G L +AR + ++ R+++S+T++++GYA G + +A ELF+E+P
Sbjct: 158 DAFVHTSLITMYVQNGELGNARLVFERSSMRDVVSYTALITGYASRGFLDQALELFDEIP 217
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R+V+SWNAM+AGYT+S ++EAL F M + + TL +L+ CA +KMG
Sbjct: 218 VRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRANVTPNMSTLLSVLSACAQSGSLKMGNW 277
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V +I + SNI V NAL+DMY KCG+L +A + ++ + ++ +SWN ++ GY
Sbjct: 278 VSSWIEEHGLESNIKVMNALIDMYAKCGDLENA-LHLFEGIKNKNVISWNVMIGGYTHLS 336
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCR 515
+EA+ F +M Q P+ T ++L ACAN+ +L GK IH ++ +N + N
Sbjct: 337 CYKEALGLFRQMLQSNVEPNDVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNALW 396
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+++Y KC +E A ++F + + N+MI GF + + A+ +F M KEG+
Sbjct: 397 TSLIDMYAKCGNIEVANQIFDGMNPKSLASWNAMISGFAMHGQADLAISLFSRMTKEGLV 456
Query: 576 PDHITFHGILLACIHEGNVKLA 597
PD+ITF G+L AC H G + L
Sbjct: 457 PDNITFIGVLSACNHAGLLDLG 478
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 228/500 (45%), Gaps = 67/500 (13%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE--CYGKCGNL 93
SD P + L ++ K + +++ S ++ F L++ IE G+L
Sbjct: 15 SDPPYKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDL 74
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
A LF + + + WN ++ + + P ++ ++DM SG + N TY VL+S
Sbjct: 75 SYALLLFKSIGKPNQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPFVLKSC 134
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR--------------- 198
A KQ+HG I+K GF + + +SL+ Y + + +AR
Sbjct: 135 ARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDVVSYT 194
Query: 199 ----------------RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+FD+I ++ VSWN ++ Y +G +EA++ F +MLR ++ P
Sbjct: 195 ALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRANVTP 254
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
T + L AC+ S G + I + E + V+ +L +MY KCG LE+A L
Sbjct: 255 NMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLENALHLF 314
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+ +N+ISW ++ GY +EA LF +M + NV
Sbjct: 315 EGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNV--------------------- 353
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS-SNIFVSNALLDMY 421
+ + VTL IL CA L + +GK +H +I +N + +N + +L+DMY
Sbjct: 354 ----------EPNDVTLLSILPACANLGALGLGKWIHAYIDKNMKNLANNALWTSLIDMY 403
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCGN+ A F M+ + SWNA+++G+A GQ++ A++ FS M E P TF
Sbjct: 404 AKCGNIEVANQIFDGMNP-KSLASWNAMISGFAMHGQADLAISLFSRMTKEGLVPDNITF 462
Query: 481 ETLLAACANISSLEQGKQIH 500
+L+AC + L+ G H
Sbjct: 463 IGVLSACNHAGLLDLGHINH 482
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 290/605 (47%), Gaps = 42/605 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y CG +D+A F M ERD SWN ++ + Q GF + LF M G++ ++ T+
Sbjct: 351 YSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTF 410
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+++ +A E +K L L+V+ G +V L S+L++ + + + +AR +FDD+++
Sbjct: 411 ISIIDGTARMQE---AKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKD 467
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V W I+ Y+ G+ +A+ M E + +FT AL AC+ L++ EG I
Sbjct: 468 RDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLI 527
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H I+ F V +L MY KCG LE+A + Q
Sbjct: 528 HAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG-------------------- 567
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+N++SWN + A Y + W+EAL M+ D+V+ +LN C
Sbjct: 568 ------------KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC 615
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ SE G+++H + S+ VS ALL+MY +L A F +M + RD VSW
Sbjct: 616 SSASE---GRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRM-EFRDIVSW 671
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAA--CANISSLEQGKQIHCFV 503
NA++ G A G S EA+ F MQ E P K +F T+L A ++ SSL+Q + + +
Sbjct: 672 NAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLI 731
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
YE + + A+V ++ + L A R F+ D N ++ + +AL
Sbjct: 732 SDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQAL 791
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++F M++E +PD IT +L AC H G ++ F SM ++GI EHY C++ L
Sbjct: 792 KLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDL 851
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G + + E+ + +MP + + + C+ G + R+ EL+P P +
Sbjct: 852 LARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPAAY 911
Query: 684 KITTN 688
+ ++
Sbjct: 912 VVLSS 916
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 268/542 (49%), Gaps = 35/542 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L LCA AI E R + S + + N I YGKCG ++DA +F +
Sbjct: 8 LLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPS 67
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN++L A+ ++G + ++F M G++ ++IT+ VL + +L K LHG
Sbjct: 68 QVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHG 127
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+++ G NV++ +SL+ YGKC + DARR+FD + ++ VSW ++ Y+ E
Sbjct: 128 FVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVE 187
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +M + P T+A A+ AC+ + S +G IH +++ FE D VV ++
Sbjct: 188 ALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVN 247
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG LEDAR + ++ N +SW +IV+ G EA F M + I+
Sbjct: 248 MYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT---- 303
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
D+VT ILN C+ + + G+ +H I + Y
Sbjct: 304 --------------------------PDKVTFITILNACSSPATLTFGELLHECILQCGY 337
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++ V N ++ MY CG + +A +F M + RD +SWN +++G+A+ G +EA+ F
Sbjct: 338 DTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVE-RDAISWNTIISGHAQAGFCDEAVHLFR 396
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M E P KFTF +++ A +++ K + ++ + E++V AL+ ++++
Sbjct: 397 RMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVESGVELDVFLVSALINMHSRYG 453
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
+ A +F + D+++ S+I + + +AL LM+ EG+ + T L
Sbjct: 454 NVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALN 513
Query: 587 AC 588
AC
Sbjct: 514 AC 515
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 213/440 (48%), Gaps = 39/440 (8%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
EA+ L +V VFL++ I + + GN+ +AR LFD+M +RD W +++ +Y
Sbjct: 422 EAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYV 481
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+G L M G+ N T L + A L K +H ++RGF +
Sbjct: 482 QHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPA 541
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ ++L++ Y KC + +A R+F KN VSWN I Y+ +EA+ +F +M E
Sbjct: 542 VGNALINMYAKCGCLEEADRVFHQC-GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEG 600
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
++ +F L C SS EG +IH ++++ E D +V +L MY L++A
Sbjct: 601 LKADKVSFVTVLNGC---SSASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEAS 657
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ + + R+I+SW ++++G A G REA ++F M V
Sbjct: 658 RIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAP---------------- 701
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGL--SEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
D+++ +LN +G S +K + V I Y ++ V NA+
Sbjct: 702 ---------------DKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAI 746
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+ M+ + G L AR F ++ + RD SWN ++T +A+ G+ E+A+ F MQ E +RP
Sbjct: 747 VSMFGRSGRLAEARRAFERIRE-RDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPD 805
Query: 477 KFTFETLLAACANISSLEQG 496
T ++L+AC++ +E+G
Sbjct: 806 SITLVSVLSACSHGGLIEEG 825
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 239/499 (47%), Gaps = 40/499 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+ +L A++ + + +H + F + +++++ + YGKC + DA +F +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + VSWN ++ + G ++A +F +M + + P TF L CS + G
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+HG +++ E + +V SL +MY KCG +EDAR + D+ ++++SWTS++ Y
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R EA ELF+ M V+ +++T ++
Sbjct: 184 RCVEALELFHRMRPSGVLP-------------------------------NRITYATAIS 212
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA + + GK +H + + + S++ VS A+++MY KCG+L AR F +M + V
Sbjct: 213 ACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPH-PNTV 271
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCF 502
SWNA++ + G EA+ F MQ + P K TF T+L AC++ ++L G+ +H
Sbjct: 272 SWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHEC 331
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ Y+ +++ ++ +Y+ C ++ A F D I N++I G EA
Sbjct: 332 ILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEA 391
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA-LQFFDSMRCKYGIIPQLEHYECMI 621
+ +F M EGI PD TF I+ +G ++ + + + G+ + +I
Sbjct: 392 VHLFRRMLAEGITPDKFTFISII-----DGTARMQEAKILSELMVESGVELDVFLVSALI 446
Query: 622 KLYCRYGYMKELEDFVNRM 640
++ RYG ++E + M
Sbjct: 447 NMHSRYGNVREARSLFDDM 465
>gi|125587253|gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japonica Group]
Length = 583
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 282/546 (51%), Gaps = 40/546 (7%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R++ + V + F+ N I Y + + DAR +FDEMPER SW AM+ Y +
Sbjct: 67 RRVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEMPERSVVSWTAMMNVYLKL 126
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
G G + LF DM SGV N +T+ +L+S E + + +Q+H IVK G+ NVI++
Sbjct: 127 GHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW-SNVIVD 185
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
S++ Y +C + A +FD + ++ +SW ++ Y+ G+G +A+ MF +M+ E R
Sbjct: 186 SAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQALRMFSEMVSEGFR 245
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P FT + L AC+ + G Q+H ++K ++ D + +L MY +CG + D
Sbjct: 246 PNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFD---- 301
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
A+ +F+ MP RN I+W +M++GY +S ++A+
Sbjct: 302 ---------------------------AQAVFDMMPRRNTITWTSMISGYAQSGHGEKAI 334
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
M+ ++ +T+ +L+ C L +GKE+H I +N N+ + + L+ Y
Sbjct: 335 LLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSMEENLQIGSTLVWFY 394
Query: 422 RKCGNLR-SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
KCG +ARI + RD +SW A+++GY G + EA+ S +M W+ +P+ +T
Sbjct: 395 CKCGEYTYAARI--LEAMPDRDAISWTALISGYNNLGHNVEALKSLDDMLWDGVKPNTYT 452
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+ + L ACA + +L+ G++IH FV + NV +L+++Y +C ++ A VF
Sbjct: 453 YSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLIDMYMRCGKVDEARSVFDAMP 512
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL-AL 598
+++ +I GF N EAL+ LM++EG + D +L +C G+++ ++
Sbjct: 513 EHNLVTWKVIITGFAQNGLCEEALKYMYLMQQEGHEVDDFVLSTVLTSC---GDLQWKSI 569
Query: 599 QFFDSM 604
F DS+
Sbjct: 570 SFSDSV 575
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 169/342 (49%), Gaps = 31/342 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA KA+ ++L ++ + + + + Y +CG + DA+ +FD MP R+
Sbjct: 254 VLKACAEEKAVRFGKQLHCAVLKKMYKNDIHIGSALVTMYARCGEVFDAQAVFDMMPRRN 313
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W +M+ Y Q+G + + LF M V N +T +L + + K+LH
Sbjct: 314 TITWTSMISGYAQSGHGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHA 373
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K N+ + S+LV Y KC T A R+ + + +++A+SW ++ Y G+ E
Sbjct: 374 QIIKNSMEENLQIGSTLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGHNVE 433
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ ML + ++P +T+++AL AC+ L + G +IHG + K + V SL +
Sbjct: 434 ALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFSNVFVGSSLID 493
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY++CG++++AR + D E N+++W I++G+A +G
Sbjct: 494 MYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNG----------------------- 530
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
L +EAL +++LM++ ++D L +L C L
Sbjct: 531 --------LCEEALKYMYLMQQEGHEVDDFVLSTVLTSCGDL 564
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 13/285 (4%)
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L C G ++ VH R+ S FV+N L+ Y + + AR F +M +R
Sbjct: 57 LRDCGGADGVR---RVHAVAVRSLDSLGTFVANNLISAYARFDEVSDAREVFDEMPER-S 112
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
VSW A++ Y + G E + F +M + + TF LL +C + G+Q+HC
Sbjct: 113 VVSWTAMMNVYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHC 172
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+++ + NV+ A+ Y +C + A +F + + DVI +MI + + G +
Sbjct: 173 CIVKGGWS-NVIVDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGHGGQ 231
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL +F M EG +P+ T +L AC E V+ Q ++ K + ++
Sbjct: 232 ALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAV-LKKMYKNDIHIGSALV 290
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+Y R G + + + + MP T+ I +GYA G
Sbjct: 291 TMYARCGEVFDAQAVFDMMPRRNTITWTSMI------SGYAQSGH 329
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 290/599 (48%), Gaps = 68/599 (11%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+A++L++S + + +H I+K+G V L ++L+ Y K + A +FD++
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 206 NKNAVSWNVIVRRYLVAGNGK-------------------------------EAVVMFFK 234
K+ SWN ++ Y GN + A+ MF K
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M+ E + P FT +N L +C+ + G +IH ++K+ V SL MY KCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
A+ + D+ +NI +W +++S Y SG+ A F +MP+R+++SWN+M++GY++
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 355 LLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
EAL F ++ + + D TL IL+ CA L ++ +GK++H +I R + ++ V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 414 SNAL---------------------------------LDMYRKCGNLRSARIWFYQMSQR 440
NAL LD Y K GN++ AR F ++ +
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKL-RD 371
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
RD V+W A++ GY + G +A+ F M E P+ +T +L+ ++++ LE GKQI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGFCHNER 558
H I+ AL+ +Y K + A RVF + +++ SMI+ +
Sbjct: 432 HASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGL 491
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EA+ +F M G+KPDHIT+ G+L AC H G V+ ++++ M + I P L HY
Sbjct: 492 GKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYA 551
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI LY R G ++E F+ MP P + C+ + A L + AA RL ++P
Sbjct: 552 CMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDP 610
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 167/574 (29%), Positives = 278/574 (48%), Gaps = 70/574 (12%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARK---------------LESNLVTFY--------- 72
+ P S +AH+ Q K R L +NL+TFY
Sbjct: 5 NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFA 64
Query: 73 -------PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
P F N I Y K GN + +R L EMP+ D SW A++ Y Q G
Sbjct: 65 HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
+ +F M V +Q T +NVL S A L + +++H +VK G V + +SL+
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK------------------- 226
+ Y KC A+ +FD + KN +WN ++ Y+ +G +
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244
Query: 227 ------------EAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
EA+V+F KML E ++P NFT A+ L AC+ L G QIH I++
Sbjct: 245 MISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA 304
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ--PDERNIISWTSIVSGYAISGRIREARE 331
+ E V +L MY K G +E AR +++ NII++TS++ GY G ++ ARE
Sbjct: 305 ETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPARE 364
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+FN++ +R+V++W AM+ GY ++ LW +AL+ LM + + TL +L+V + L+
Sbjct: 365 IFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ GK++H + SS V+NAL+ MY K GN+ A+ F + +++ VSW +++
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
A+ G +EA+ F M +P T+ +L+AC ++ +EQG++ + ++ +EI
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYN-MMTEVHEI 543
Query: 511 NVVCR--GALVEVYTKCCCLEYAIRVFKESSSLD 542
++++Y + L+ A +F ES ++
Sbjct: 544 EPTLSHYACMIDLYGRAGLLQEA-YLFIESMPIE 576
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 304/619 (49%), Gaps = 58/619 (9%)
Query: 84 IECYGKCGNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I Y +CG L+DA+ +FDE + D WN+++ AY +G L LF M GV A
Sbjct: 163 ITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVA 222
Query: 142 -NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++TYA+V+ + E +HG I+K G L +SLV YGKC + A ++
Sbjct: 223 PTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQL 281
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACSFLS 258
F+ I K+ VSWN ++ G G+ A+ +F +ML+ + ++P TF + L A S LS
Sbjct: 282 FERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS 341
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G +IH I ++ E D + SL Y KC + AR + ++ R+IISW S+++
Sbjct: 342 ALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLA 401
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY + + ++F M ML+G + D +
Sbjct: 402 GYEQNEQQGRCFDIFKRM----------MLSGI---------------------EPDSHS 430
Query: 379 LGLILNVC----AGLSEIKMGKEVHGFIHRNDYSSNI--FVSNALLDMYRKCGNLRSARI 432
L +I N +GL + GKE+HG+I R + VSNA+L MY K + A
Sbjct: 431 LTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEK 490
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANIS 491
F M + RD SWNA++ GY+R + E+ + F ++ + P + LL +C +
Sbjct: 491 IFKGM-KNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLV 549
Query: 492 SLEQGKQIHCFVIR-----NCYEIN--VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
SL+ GKQ H V + +C + + AL+ +Y+KC ++ A +VF + DV
Sbjct: 550 SLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVF 609
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+MI G H+ EAL++F MK +GIKP+ +TF +L+AC H G V+ +FDSM
Sbjct: 610 SWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSM 669
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN-----RMPFNPTVPMLRKI-FDKCRK 658
YG+ P +EHY CMI L+ R G + V P++ + L K+ C
Sbjct: 670 YNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHA 729
Query: 659 NGYATLGEWAARRLNELNP 677
+ LG AA ++ EL P
Sbjct: 730 SKQLDLGVEAATKILELEP 748
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/562 (25%), Positives = 261/562 (46%), Gaps = 49/562 (8%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A+ LFD P RD SW+A++ AY++ G + LF M G+ N + A++L+ S
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWN 213
E+G+ +QLHG ++ GF + + ++ + Y +C V+ DA+R+FD+ + + + WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
I+ Y+ G E + +F KM+ + P T+A+ + AC G +HG IIK
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
E + + SL Y KCG L+ A L ++ ++++SW ++++ G A L
Sbjct: 254 AGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F M L + ++VT +L+ +GLS +
Sbjct: 313 FRRM-----------------------------LKVEPPVQPNRVTFLSLLSAVSGLSAL 343
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G+E+H I R + ++N+L+ Y KC + AR F ++ RD +SWN++L G
Sbjct: 344 RCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERL-LLRDIISWNSMLAG 402
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS----LEQGKQIHCFVIRNC 507
Y + Q F M P + + A + SS +GK+IH +++R
Sbjct: 403 YEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRI 462
Query: 508 YE--INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+++ A++++Y K + A ++FK + D N+M+ G+ N + + L +
Sbjct: 463 TPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMI 522
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF-------FDSMRCKYGIIPQLEHYE 618
F + K+G DH++ +L +C +++L QF F+ C + L
Sbjct: 523 FLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQ-DSLLSINN 581
Query: 619 CMIKLYCRYGYMKELEDFVNRM 640
+I +Y + G +K+ +M
Sbjct: 582 ALISMYSKCGSIKDAAQVFLKM 603
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 215/473 (45%), Gaps = 59/473 (12%)
Query: 45 YAHLFQLCASSK-----AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
YA + C SS A+V R +++ L L N + YGKCGNL A L
Sbjct: 228 YASVVNACGSSGEEKYGAMVHGRIIKAGL------EATNLWNSLVTFYGKCGNLQHASQL 281
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM--NHSGVSANQITYANVLRSSAEEL 157
F+ + +D SWNAM+ A Q G L LF M V N++T+ ++L + +
Sbjct: 282 FERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS 341
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L +++H I + + + +SL+ Y KC + AR +F+ + ++ +SWN ++
Sbjct: 342 ALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLA 401
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRP----LNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
Y +F +M+ I P L F A S L G +IHG I++
Sbjct: 402 GYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR 461
Query: 274 DFEG--DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
G V ++ +MY K R+ DA + R+ SW
Sbjct: 462 ITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSW------------------ 503
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
NAM+ GY+R+ +++ L + K +D V+L ++L C L
Sbjct: 504 -------------NAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVS 550
Query: 392 IKMGKEVHGFIHR-------NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+++GK+ H + + S + ++NAL+ MY KCG+++ A F +M +R+D
Sbjct: 551 LQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKM-ERKDVF 609
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
SW A++TG A G + EA+ F M+ + +P++ TF LL ACA+ +++G
Sbjct: 610 SWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEG 662
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R++ A++LF+ P R+VISW+A++A Y+R + +A M + +L +L
Sbjct: 70 RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDK 443
V EI + +++HG+ R + + + A + MY +CG L A+ F + S D
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
+ WN+++ Y G E + F +M P++ T+ +++ AC + + G +H
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+I+ E + +LV Y KC L++A ++F+ S DV+ N+MI G
Sbjct: 250 RIIKAGLEATNLW-NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308
Query: 562 ALEVFGLMKK--EGIKPDHITFHGILLA 587
AL +F M K ++P+ +TF +L A
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSA 336
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 154/357 (43%), Gaps = 53/357 (14%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K + DA +F M RD SWNAM+ Y++N L +FLD+ G
Sbjct: 473 NAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFP 532
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN--------VILESSLVDAYGKCM 192
+ ++ + +L S + L + KQ H ++ K F G + + ++L+ Y KC
Sbjct: 533 LDHVSLSILLTSCGRLVSLQLGKQFHAVVAKL-FNGQDCPHQDSLLSINNALISMYSKCG 591
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA ++F ++ K+ SW ++ G EA+ +F +M + I+P TF L
Sbjct: 592 SIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLM 651
Query: 253 ACSFLSSPYEGMQIHGVIIK-----IDFEGDDVVLGSLTEMYV-------KCGRLEDARG 300
AC+ HG +++ D +D L E Y + G+ + A+
Sbjct: 652 ACA-----------HGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKS 700
Query: 301 LLD------QPDERNIIS-WTSIVSGYAISGRIR---EARELFNEMPERNVISWNAMLAG 350
L++ +P +I++ W ++ S ++ EA E+ + ++ +
Sbjct: 701 LVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANL 760
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
Y S LW++A+ +RK +D GL V G S I G H F+ + Y
Sbjct: 761 YASSGLWEDAIK----VRKAMRD-----KGLRKEV--GCSWIDTGNRRHVFVAGDVY 806
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 303/593 (51%), Gaps = 49/593 (8%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
A+ + R++ +++V FL + ++ YGKCG++DDA +F +P R SWN ++
Sbjct: 1 ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
A+ +N + +E+F M+ +G+ + T ++VL + + +L K++H + RG
Sbjct: 61 AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS 120
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
++I++++LV Y +C + AR +FD I++K+ VSWN ++ G ++A+ +F +M
Sbjct: 121 SIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM- 179
Query: 237 REDIRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++ P TFA+ ACS L E G +IH I E + V ++ MY K G++
Sbjct: 180 --ELEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKV 237
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
AR + + +N++SW +++ Y + REA E+++EM + V
Sbjct: 238 GMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKV-------------- 283
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
D+VT+ + L + A L +K+G E+H + Y SNI V N
Sbjct: 284 -----------------QRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQN 326
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+ MY KC L +AR F ++ + D VSW A++ Y + G++ EA+ + +M+ E
Sbjct: 327 ALISMYGKCNELDAARRVFSKV-RAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGME 385
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVI--RNCYEINVVCRGALVEVYTKCCCLEYAI 532
P K TF ++L+AC+N S LE G+ +H ++ ++ + V+ AL+ +Y KC L+ +
Sbjct: 386 PDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLV-AALINMYVKCGRLDLSS 444
Query: 533 RVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH- 590
+F+ + V++ N+MI + R A++++ +MK+ G+ PD T IL AC
Sbjct: 445 EIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAEL 504
Query: 591 ---EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
E +L ++ S C + +I +Y G ++E + RM
Sbjct: 505 QDLEKGEQLHVEIIASRDCSQNPVV----LNALISMYASCGEIREAKAVFKRM 553
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 321/658 (48%), Gaps = 46/658 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P S +L + + C+S + + E +K+ S + + + + N + Y +C LD AR
Sbjct: 84 KPDSATL-SSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVAR 142
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--- 154
+FD++ + SWNAM+ A + G + L+LF M + N++T+A+V + +
Sbjct: 143 VVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRME---LEPNEVTFASVFNACSLLP 199
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+ E+G K++H I NV + +++V YGK + AR++F+ IQ+KN VSWN
Sbjct: 200 DHREVG--KRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNA 257
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y +EA+ ++ +M+ + ++ T AL + L G+++H + +
Sbjct: 258 MLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHG 317
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
++ + V +L MY KC L+ AR +F+
Sbjct: 318 YDSNIKVQNALISMYGKCNELD-------------------------------AARRVFS 346
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
++ +V+SW A++ YT+ +EAL+ M + D+VT +L+ C+ S++++
Sbjct: 347 KVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLEL 406
Query: 395 GKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G+ +H + R D S+ + AL++MY KCG L + F + V WNA++T Y
Sbjct: 407 GQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAY 466
Query: 454 ARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVI--RNCYEI 510
+ G S A+ + M Q P + T ++L+ACA + LE+G+Q+H +I R+C +
Sbjct: 467 EQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQ- 525
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
N V AL+ +Y C + A VFK + DV+ +I + R AL ++ M
Sbjct: 526 NPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRML 585
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
EG++P TF + LAC H G V +F SM + I P +HY C++ + R G +
Sbjct: 586 VEGVQPTEPTFLCVFLACGHAGLVDECKWYFQSM-IEDRITPTFDHYSCVVTVLSRAGKL 644
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+E ED ++ MPFNP + CR +G AA EL+ + + +N
Sbjct: 645 EEAEDLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLSN 702
>gi|218200374|gb|EEC82801.1| hypothetical protein OsI_27570 [Oryza sativa Indica Group]
Length = 1194
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 259/484 (53%), Gaps = 3/484 (0%)
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
A WN+++ Y G ++ ++ + KM+ + FT+ + L AC L G I
Sbjct: 109 AFPWNLLIWGYAGRGLWEDVILSYEKMVAWGVAADRFTYPSVLRACGELREVTIGRNIEQ 168
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I + + D V +L MY KCG LEDAR + D R+++SW ++VS YA +G+ +
Sbjct: 169 RIRRCRYGLDMYVWNALVGMYAKCGELEDARRVFDGMAVRDVVSWNTMVSVYASTGKWNK 228
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK-TTKDIDQVTLGLILNVCA 387
A +L ++P NV++WNA+ AG ++ + E + V +R +D VT+ + L C
Sbjct: 229 AFDLLRQVPGANVVTWNAVAAGNLKAGNYDEVIRLVSQVRGYHGTGVDSVTIVIGLKACG 288
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +G+E+HG R + S V N+L+ MY +CG + SA + F S R +WN
Sbjct: 289 RTGYLSVGRELHGVAVRLCFDSLECVVNSLITMYSRCGMMSSACLLFRACSVR-SITTWN 347
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++L G+A Q EEA F EM + P+ T T+L+ A + L G+++HC+++++
Sbjct: 348 SLLAGFAFMEQIEEASLIFREMIGFGVCPNGVTVLTMLSLGARVGHLCHGRELHCYILKH 407
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ + + +LV++Y+KC + A RVF+ D S++LG+ G +L++F
Sbjct: 408 ELDSSKLMENSLVDMYSKCRQMVVAQRVFELMQFRDKHAYTSLVLGYGLQREGHVSLKLF 467
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M I+PDH+TF +L AC H G V F M +GI P++EH+ CM+ LYCR
Sbjct: 468 DEMIVNSIEPDHVTFVAVLSACSHSGLVTQGQLLFAKMVSIFGIAPRVEHFSCMVDLYCR 527
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G +K E ++ MPF PT ML + + CR +G +G+ AA++L + P +++
Sbjct: 528 EGLLKMAEVIIDNMPFQPTAAMLATLIEACRIHGNTEVGDRAAKKLLAMRTNNPGHYRLI 587
Query: 687 TNRF 690
N +
Sbjct: 588 ANMY 591
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 139/324 (42%), Gaps = 32/324 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + + R +E + +++ N + Y KCG L+DAR +FD M
Sbjct: 147 YPSVLRACGELREVTIGRNIEQRIRRCRYGLDMYVWNALVGMYAKCGELEDARRVFDGMA 206
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDM------------------------------ 134
RD SWN M+ Y G + +L +
Sbjct: 207 VRDVVSWNTMVSVYASTGKWNKAFDLLRQVPGANVVTWNAVAAGNLKAGNYDEVIRLVSQ 266
Query: 135 --NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ G + +T L++ L V ++LHG+ V+ F + +SL+ Y +C
Sbjct: 267 VRGYHGTGVDSVTIVIGLKACGRTGYLSVGRELHGVAVRLCFDSLECVVNSLITMYSRCG 326
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+M+ A +F ++ +WN ++ + +EA ++F +M+ + P T L
Sbjct: 327 MMSSACLLFRACSVRSITTWNSLLAGFAFMEQIEEASLIFREMIGFGVCPNGVTVLTMLS 386
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ + G ++H I+K + + ++ SL +MY KC ++ A+ + + R+ +
Sbjct: 387 LGARVGHLCHGRELHCYILKHELDSSKLMENSLVDMYSKCRQMVVAQRVFELMQFRDKHA 446
Query: 313 WTSIVSGYAISGRIREARELFNEM 336
+TS+V GY + + +LF+EM
Sbjct: 447 YTSLVLGYGLQREGHVSLKLFDEM 470
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 1/226 (0%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
++N I Y +CG + A LF R +WN++L + +F +M G
Sbjct: 314 VVNSLITMYSRCGMMSSACLLFRACSVRSITTWNSLLAGFAFMEQIEEASLIFREMIGFG 373
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
V N +T +L A L ++LH I+K + ++E+SLVD Y KC M A+
Sbjct: 374 VCPNGVTVLTMLSLGARVGHLCHGRELHCYILKHELDSSKLMENSLVDMYSKCRQMVVAQ 433
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F+ +Q ++ ++ +V Y + G ++ +F +M+ I P + TF L ACS
Sbjct: 434 RVFELMQFRDKHAYTSLVLGYGLQREGHVSLKLFDEMIVNSIEPDHVTFVAVLSACSHSG 493
Query: 259 SPYEGMQIHGVIIKIDFEGDDVV-LGSLTEMYVKCGRLEDARGLLD 303
+G + ++ I V + ++Y + G L+ A ++D
Sbjct: 494 LVTQGQLLFAKMVSIFGIAPRVEHFSCMVDLYCREGLLKMAEVIID 539
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/589 (28%), Positives = 286/589 (48%), Gaps = 38/589 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP ++ +W +++ YT+NG P L +F DM SGV+ N L + A+ L
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+H L V+ GF G+ + S L++ Y +C + A+ +FD + + + V + ++ +
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G + A +ML++ ++P T L AC + G QIHG +IK
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIK---------- 166
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
GL Q ++ S T+++ Y+ +G + A+ +F+ + +NV+
Sbjct: 167 ---------------KIGLRSQ----SVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVV 207
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SW +M+ Y R +EAL M D ++ L ++L C I +G+++H
Sbjct: 208 SWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSA 264
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
++D ++I VSNALL MY + G + ++ + D VSW ++ + G E+A
Sbjct: 265 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKA 323
Query: 463 MTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ +M E P+ + F ++L++CA+++SL+QG Q HC ++ + + AL+ +
Sbjct: 324 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINM 383
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y+KC + A F + DV NS+I G + +ALEVF M+ GIKPD TF
Sbjct: 384 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 443
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G+L+ C H G V+ FF M +Y P HY CMI + R G E +N MP
Sbjct: 444 LGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMP 503
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F P + + + C+ + +G+ AA RL EL+ + + +N +
Sbjct: 504 FEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIY 552
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 196/417 (47%), Gaps = 42/417 (10%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
IE Y +CG+L A+ +FD M D + +++ A+ +NG E + M G+ N+
Sbjct: 83 IEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 142
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESS-LVDAYGKCMVMTDARRMF 201
T +L + L +Q+HG ++K+ G + S+ L+D Y + A+ +F
Sbjct: 143 HTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVF 198
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D + KN VSW +++ Y+ G +EA+ +F M+ E + P F + L AC +
Sbjct: 199 DSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL-- 256
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H IK D D V +L MY + G +E+ +L++ + +++SWT+ +S
Sbjct: 257 -GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 315
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G +A L +M G+T +
Sbjct: 316 QNGFGEKAIALLCQMHSE----------GFTP---------------------NGYAFSS 344
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L+ CA ++ + G + H + S I NAL++MY KCG + SAR+ F M
Sbjct: 345 VLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM-HTH 403
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
D SWN+++ G+A+ G + +A+ FS+M+ +P TF +L C + +E+G+
Sbjct: 404 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE 460
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 201/439 (45%), Gaps = 31/439 (7%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y + G A+ +FD + ++ SW +M+ Y ++G L++F DM GV N+
Sbjct: 182 IDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNE 241
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ VL + +G+ +QLH +K ++ + ++L+ YG+ ++ + M +
Sbjct: 242 FALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNK 298
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I+N + VSW + G G++A+ + +M E P + F++ L +C+ ++S +G
Sbjct: 299 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 358
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
MQ H + +K+ + + +L MY KCG++ AR D ++ SW S++ G+A
Sbjct: 359 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 418
Query: 324 GRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
G +A E+F++M + ++ +L G S + +E F LM IDQ +
Sbjct: 419 GDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM------IDQYSF 472
Query: 380 GLILNVCAGLSEIKMGK-----EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ A + ++ +G+ E I+ + + + LL + NL ++
Sbjct: 473 TPAPSHYACMIDM-LGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAA 531
Query: 435 YQMSQRRDKVSWNAVLTG--YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
++ + D+ S + VL YA G+ E+A M ET + A S
Sbjct: 532 DRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMD----------ETGVKKDAGCSW 581
Query: 493 LEQGKQIHCFVIRNCYEIN 511
+E ++H F R+ N
Sbjct: 582 IEINNEVHTFASRDMSHPN 600
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 182/633 (28%), Positives = 289/633 (45%), Gaps = 73/633 (11%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
EARKL + P + N I Y GNL +AR LF+E P + +W++++ Y
Sbjct: 55 EARKLFDQM----PYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYC 110
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+NG L F M G +Q T +VLR+ + L K +H +K N+
Sbjct: 111 KNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIF 170
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ + LVD Y KC + +A +F + + KN V W ++ Y G +A+ F +M +
Sbjct: 171 VATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQ 230
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+ +FTF + L AC+ +S+ G Q+HG II F + V +L +MY KCG L A
Sbjct: 231 GMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASA 290
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R +LD + +++ W S++ G G + EA LF++M R++
Sbjct: 291 RMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDI----------------- 333
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
ID T +L A +K+G+ VH + + + VSNAL+
Sbjct: 334 --------------RIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALV 379
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
DMY K GNL A F ++ +D +SW +++TGY G E+A+ F +M+ +
Sbjct: 380 DMYAKQGNLSCALDVFNKILD-KDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQ 438
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
F + +ACA ++ +E G+Q+H I++ + +L+ +Y KC CLE AIRV
Sbjct: 439 FVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDS 498
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ +VI ++I+G+ N G V+
Sbjct: 499 METRNVISWTAIIVGYAQN-----------------------------------GLVETG 523
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
+F+SM YGI P + Y CMI L R G + E E +NRM P + + + CR
Sbjct: 524 QSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACR 583
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+G LGE A + L +L P + + +N F
Sbjct: 584 VHGNLELGERAGKNLIKLEPSNSLPYVLLSNMF 616
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 211/434 (48%), Gaps = 34/434 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y+L + + C++ + + + + +F+ ++ Y KC L +A
Sbjct: 131 KPSQYTL-GSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAE 189
Query: 98 GLFDEMPERDG-GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
LF +P+R W AML Y QNG + ++ F +M + G+ +N T+ ++L +
Sbjct: 190 YLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSI 249
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+Q+HG I+ GF NV ++S+LVD Y KC + AR + D ++ + V WN ++
Sbjct: 250 SAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMI 309
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ G +EA+V+F KM DIR +FT+ + L + + + G +H + IK F+
Sbjct: 310 VGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFD 369
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V +L +MY K G L A + ++ ++++ISWTS+V+GY +G +A +LF +
Sbjct: 370 ACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCD- 428
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
MR D+DQ + + + CA L+ I+ G+
Sbjct: 429 ------------------------------MRTARVDLDQFVVACVFSACAELTVIEFGR 458
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+VH ++ S + N+L+ MY KCG L A I + R+ +SW A++ GYA+
Sbjct: 459 QVHANFIKSSAGSLLSAENSLITMYAKCGCLEDA-IRVXDSMETRNVISWTAIIVGYAQN 517
Query: 457 GQSEEAMTSFSEMQ 470
G E + F M+
Sbjct: 518 GLVETGQSYFESME 531
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 208/399 (52%), Gaps = 9/399 (2%)
Query: 245 FTFANALFACSF-LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
F +N C+F P IHG+ + +L L+ K GR+++AR L D
Sbjct: 6 FQTSNFFTKCNFHFKHPLFIRCIHGIAHYSSNLDSNQLLSELS----KNGRVDEARKLFD 61
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
Q R+ +W ++S YA G + EAR+LFNE P N I+W+++++GY ++ E L
Sbjct: 62 QMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQ 121
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
M + Q TLG +L C+ LS + GK +H + + +NIFV+ L+DMY K
Sbjct: 122 FSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSK 181
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFET 482
C L A F+ + R++ V W A+LTGYA+ G+S +A+ F EM+ + S FTF +
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPS 241
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L AC +IS+ G+Q+H +I + + NV + ALV++Y KC L A R+ ++ +D
Sbjct: 242 ILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASA-RMILDTMEID 300
Query: 543 VIIC-NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
++C NSMI+G + EAL +F M I+ D T+ +L + N+K+ +
Sbjct: 301 DVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIG-ESV 359
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
S+ K G ++ +Y + G + D N++
Sbjct: 360 HSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI 398
>gi|302143464|emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 244/435 (56%), Gaps = 2/435 (0%)
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
F++ L +C +S G Q+H +II D + L +Y KCG+L+ A L
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+NI+S +++GY SG AR++F+EMPERNV +WNAM+AG + +E L
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + D+ LG +L CAGL + G++VHG++ + + N+ V ++L MY KCG+
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLA 485
L M + + V+WN ++ G A+ G EE + ++ M+ RP K TF ++++
Sbjct: 235 LGEGERLIRAMPSQ-NVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVIS 293
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
+C+ +++L QG+QIH VI+ + V +L+ +Y++C CLEY+++VF E + DV+
Sbjct: 294 SCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVC 353
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
+SMI + + RG EA+++F M++E ++ + +TF +L AC H G + ++FFD M
Sbjct: 354 WSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMV 413
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
KYG+ P+LEHY CM+ L RYG ++E E + MP V + + C+ + +
Sbjct: 414 EKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA 473
Query: 666 EWAARRLNELNPWAP 680
+ + L+P P
Sbjct: 474 RRISEEVFRLDPRDP 488
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 184/401 (45%), Gaps = 53/401 (13%)
Query: 17 SPKPTPSKTLTKTIS-----GHLKS----------DEPVSYSLYAHLFQLCASSKAIVEA 61
S P+ LT + GHLK EP SL++HL Q C S ++
Sbjct: 15 STNPSSGSELTAEFTNLCSKGHLKQAFDRFSSHIWSEP---SLFSHLLQSCISENSLSLG 71
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA------------------------- 96
++L S ++T + F+ N + Y KCG LD A
Sbjct: 72 KQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRS 131
Query: 97 ------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
R +FDEMPER+ +WNAM+ Q F L LF MN G ++ +VL
Sbjct: 132 GDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVL 191
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
R A L +Q+HG + K GF N+++ SSL Y KC + + R+ + ++N V
Sbjct: 192 RGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVV 251
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+WN ++ G +E + + M RP TF + + +CS L++ +G QIH +
Sbjct: 252 AWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEV 311
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
IK V+ SL MY +CG LE + + + + +++ W+S+++ Y GR EA
Sbjct: 312 IKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAI 371
Query: 331 ELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+LFN+M E N +++ ++L + L ++ + F LM
Sbjct: 372 DLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLM 412
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 175/383 (45%), Gaps = 64/383 (16%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM----------- 194
++++L+S E L + KQLH LI+ G + + + L++ Y KC +
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 195 --------------------TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
AR+MFD++ +N +WN +V + +E + +F +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M P F + L C+ L + G Q+HG + K FE + VV+ SL MY+KCG
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L + L+ +N+++W ++++G A +G E + +N M +AG+
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMK----------MAGFRP- 283
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
D++T +++ C+ L+ + G+++H + + S + V
Sbjct: 284 --------------------DKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI 323
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET- 473
++L+ MY +CG L + F + + D V W++++ Y G+ EA+ F++M+ E
Sbjct: 324 SSLISMYSRCGCLEYSLKVFLE-CENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKL 382
Query: 474 RPSKFTFETLLAACANISSLEQG 496
+ TF +LL AC++ E+G
Sbjct: 383 EANDVTFLSLLYACSHCGLKEKG 405
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 146/287 (50%), Gaps = 2/287 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA +A+V R++ + + +++ Y KCG+L + L MP ++ +W
Sbjct: 194 CAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAW 253
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ++ QNG+P L+ + M +G ++IT+ +V+ S +E LG +Q+H ++K
Sbjct: 254 NTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIK 313
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G V + SSL+ Y +C + + ++F + +N + V W+ ++ Y G G EA+ +
Sbjct: 314 AGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDL 373
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII-KIDFEGDDVVLGSLTEMYV 290
F +M +E + + TF + L+ACS +G++ +++ K + + ++
Sbjct: 374 FNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLG 433
Query: 291 KCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ G +E+A L+ P + ++I+W +++S I + AR + E+
Sbjct: 434 RYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEV 480
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 183/612 (29%), Positives = 305/612 (49%), Gaps = 41/612 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS----GVSAN 142
Y +CG++ DA LFDEMPERD +W A++ NG G L + M S G N
Sbjct: 155 YARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPN 214
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGF--CGNVILESSLVDAYGKCMVMTDARRM 200
T + L + EL V LHG VK G C +V+ SSL Y KC DAR +
Sbjct: 215 SRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVV--SSLFSMYTKCDSTEDARIL 272
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F ++ K+ VSW ++ Y AG+ ++AV +F M ++P + L +
Sbjct: 273 FPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 261 YEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G H I++ +F GD V++G +L MY KC +++ A + +R+ SW+S+V
Sbjct: 333 RGGKTFHAAIVRRNF-GDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVA 391
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y +G + EL+ EM R+ K + D +L
Sbjct: 392 YCKAGLDLKCLELYREMQFRD----------------------------KDEFEYDTNSL 423
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
I++ C+ L +++G+ H + ++ N V+NAL+ MY +CGN AR F M +
Sbjct: 424 ISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIF-GMVK 482
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+D V+W+A+++ Y+ G S++A+ + +M E +P+ T +++++CAN+++LE G+
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGEL 542
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH V E ++ ALV++Y KC L A ++F DV+ N MI G+ +
Sbjct: 543 IHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGE 602
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
+AL++F +M++ +KP+ +TF IL AC H G V + F M +Y + P L+HY
Sbjct: 603 AIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYA 661
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
CM+ L + G+++E ED V+ MP P + + C+ + +G A++ +P
Sbjct: 662 CMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPE 721
Query: 679 APFQFKITTNRF 690
+ + +N +
Sbjct: 722 NDGYYILMSNSY 733
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 230/497 (46%), Gaps = 45/497 (9%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P D WN++L + + TL M SG ++ T V ++AE L V
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 164 QLHGLIVKRGFC---GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+H V+ G G+V + SSLV Y +C + DA R+FD++ ++ V+W ++ +
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 221 VAGNGKEAVVMFFKMLRE----DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
G E + +M+R RP + T + L AC L G +HG +K
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V+ SL MY KC EDAR L + E++++SWTS++ Y +G +A ELF M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
E + D+V + +L ++++ GK
Sbjct: 308 EESGL-------------------------------QPDEVVISCLLAGLGNDAKVRGGK 336
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
H I R ++ ++ + NAL+ MY KC + A F +M +RD SW++++ Y +
Sbjct: 337 TFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDTDSWSSMVVAYCKA 395
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFET-----LLAACANISSLEQGKQIHCFVIRNCYEIN 511
G + + + EMQ+ + +F ++T ++++C+ + L G+ HC+ I++ N
Sbjct: 396 GLDLKCLELYREMQFRDK-DEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN 454
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
AL+ +Y +C + A ++F + DV+ +++I + H ++AL ++ M
Sbjct: 455 SSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 572 EGIKPDHITFHGILLAC 588
EG+KP+ T ++ +C
Sbjct: 515 EGVKPNSATLVSVISSC 531
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 171/379 (45%), Gaps = 38/379 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL-----F 131
V + N I Y KC +D A +F + +RD SW++M+ AY + G + LEL F
Sbjct: 351 VLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQF 410
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
D + N + S L LG S H +K N + ++L+ YG+C
Sbjct: 411 RDKDEFEYDTNSLISIISSCSRLGRLRLGQSA--HCYSIKHLAGENSSVANALISMYGRC 468
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
AR++F ++ K+ V+W+ ++ Y G+ K+A++++ +ML E ++P + T + +
Sbjct: 469 GNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVI 528
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+C+ L++ G IH + + E D + +L +MY+KCG+L AR + D ER+++
Sbjct: 529 SSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVV 588
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W ++SGY + G +A +LF+ M NV
Sbjct: 589 TWNVMISGYGMHGEAIQALKLFSMMERGNV------------------------------ 618
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ +T IL+ C + G+E+ + N+ ++D+ K G+L+ A
Sbjct: 619 -KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677
Query: 432 IWFYQMSQRRDKVSWNAVL 450
M D W +L
Sbjct: 678 DVVSAMPIEPDGGIWGTLL 696
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 177/414 (42%), Gaps = 40/414 (9%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH L V G + LV AY + A F +A WN ++R A +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---IDFEGDDVV 281
+ +M RP FT A + L + G +H ++ ++ +G V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY +CG + DA L D+ ER++++WT+++SG +G+
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQC--------------- 192
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD----IDQVTLGLILNVCAGLSEIKMGKE 397
E L ++ M ++ D + T+ L C L E+ +G
Sbjct: 193 ----------------GEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTC 236
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HGF + V ++L MY KC + ARI F ++ + +D VSW +++ Y R G
Sbjct: 237 LHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE-KDLVSWTSLIGAYCRAG 295
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+E+A+ F M+ +P + LLA N + + GK H ++R + +V+
Sbjct: 296 HAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGN 355
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
AL+ +Y KC ++ A VF+ D +SM++ +C + LE++ M+
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 5/265 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YG+CGN D AR +F + +D +W+A++ +Y+ G L L+ M GV
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T +V+ S A L + +H + G ++ + ++LVD Y KC + AR+M
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V+WNV++ Y + G +A+ +F M R +++P + TF L AC
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG 319
+G ++ + + E + + ++ K G L++A ++ P E + W +++
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698
Query: 320 YAISGR----IREARELFNEMPERN 340
+ +R A++ F PE +
Sbjct: 699 CKMHDNFEMGLRVAKKAFASDPEND 723
>gi|302820510|ref|XP_002991922.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
gi|300140308|gb|EFJ07033.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
Length = 690
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 185/727 (25%), Positives = 344/727 (47%), Gaps = 84/727 (11%)
Query: 12 ILSKSSPKPTPSKTLTKTIS-------GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKL 64
++S+++ T S L ++I GH D V +YA L + C SK++ + R +
Sbjct: 1 MISRATLPKTWSGLLPQSIDPSVLARLGH--KDLDVDNDVYATLLRECERSKSLSQGRYI 58
Query: 65 ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP 124
++++ + FL N + YGKCG++ DA+ FD++ ++ SW MLGA+ G
Sbjct: 59 HAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEAFDQIHRKNVFSWTIMLGAFADCGHH 118
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
+ ++++ M GV + + +A++ +E K +H ++++G +VI+ ++L
Sbjct: 119 RQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAESDVIVANNL 178
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
V Y KC + AR +F I+NKN +SWN ++ + G+ A+ ++ E P
Sbjct: 179 VTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDFASALELYV----EHPVPDK 234
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD- 303
T A AC+ L G +IH +++ E D +V SL MY KC + DA+ L D
Sbjct: 235 ITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSLIGMYGKCYCVGDAKRLFDG 294
Query: 304 -QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+ R++ISW SI++ Y ++G +A ELF E
Sbjct: 295 LEAKNRDVISWNSIIAAYILAGMSSQALELFRE--------------------------- 327
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
+ + +++T +++ C+ L +++ G+ +H I ++++ + V N LL MY
Sbjct: 328 ------RMDVEPNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREVAVENGLLLMYA 381
Query: 423 KCGNLRSARIWFYQMSQR-----------------------------RDKVSWNAVLTGY 453
KCG++ A F M R RD V+W A++T +
Sbjct: 382 KCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAF 441
Query: 454 ARRGQ-SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
+++ S EA+ F +M + ++P + TF ++L + A + L +G+ +HC V+ ++ +
Sbjct: 442 SQQEHTSMEAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDVLACGFQSD 501
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
VV AL+++Y+KC L A R F + S +++ N+MI + E++ M
Sbjct: 502 VVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMI 561
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFD---SMRCKYGIIPQLEHYECMIKLYCRY 627
EG++P+ +TF +L C H G +D S+ ++G+ +H+ ++ + R
Sbjct: 562 LEGVRPNDVTFTNMLFLCSHGGGGDRECGIWDACASIVLEFGVKITPDHHCSIVDVLGRS 621
Query: 628 GYMKELEDFVNR-MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G ++E E+FV++ M F P + R + C G A+R+ E+ P + +
Sbjct: 622 GRLEEAEEFVDKGMGFEPGIVEYRTLLGSCTVACDMERGARVAQRVMEIEPQTSMAYSLL 681
Query: 687 TNRFDRY 693
R+
Sbjct: 682 AKILRRF 688
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 288/610 (47%), Gaps = 69/610 (11%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P V N+AI + + G + DA LF MP R ++NAML Y+ NG L L +
Sbjct: 36 PEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG----RLPLAASL 91
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHG-LIVKRGFCGNVILESSLVDAYGKCMV 193
+ + +Y +L + A L ++ L + V+ NV++ S + +
Sbjct: 92 FRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHGL 146
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
++ AR FD K+AVSWN ++ Y+ G +EA +F D N
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWN--------- 197
Query: 254 CSFLSSPYEGMQIHGVIIKID-FEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNII 311
+ +S + ++ D G DVV + + Y + G + +AR L D R++
Sbjct: 198 -ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+WT++VSGYA +G + EAR +F+ MPERN +SWNAM+A Y + + EA + +M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM---- 312
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
C N+ N +L Y + G L A+
Sbjct: 313 -------------PC----------------------RNVASWNTMLTGYAQAGMLEEAK 337
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM----QWETRPSKFTFETLLAAC 487
F M Q+ D VSW A+L Y++ G SEE + F EM +W R + F +L+ C
Sbjct: 338 AVFDTMPQK-DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA---FACVLSTC 393
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
A+I++LE G Q+H +IR Y + AL+ +Y KC +E A F+E DV+ N
Sbjct: 394 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 453
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI G+ + G+EALE+F +M+ KPD IT G+L AC H G V+ + +F SM
Sbjct: 454 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 513
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
+G+ + EHY CMI L R G + E D + MPF P M + R + LG
Sbjct: 514 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 573
Query: 668 AARRLNELNP 677
AA ++ EL P
Sbjct: 574 AAEKIFELEP 583
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 220/435 (50%), Gaps = 20/435 (4%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
L ++L P P + N + +L DARGLFDEMP RD ++N M+ ++ +G
Sbjct: 87 LAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGL 146
Query: 124 PGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
F L VS N + A V EE GL R + I +
Sbjct: 147 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR--------GLFNSRTEW-DAISWN 197
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+ Y + M++AR +FD + ++ VSWN++V Y G+ EA +F D+
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV-- 255
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
FT+ + + E ++ + E + V ++ Y++ +++A+ L
Sbjct: 256 --FTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELF 309
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
+ RN+ SW ++++GYA +G + EA+ +F+ MP+++ +SW AMLA Y++ +E L
Sbjct: 310 NMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
M + + +++ +L+ CA ++ ++ G ++HG + R Y FV NALL MY
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFE 481
KCGN+ AR F +M + RD VSWN ++ GYAR G +EA+ F M+ T+P T
Sbjct: 430 KCGNMEDARNAFEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 482 TLLAACANISSLEQG 496
+LAAC++ +E+G
Sbjct: 489 GVLAACSHSGLVEKG 503
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 26/344 (7%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V N + Y + G L++A+ +FD MP++D SW AML AY+Q G T
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
L+LF++M G N+ +A VL + A+ L QLHG +++ G+ + ++L+
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC M DAR F++++ ++ VSWN ++ Y G GKEA+ +F M +P + T
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS------LTEMYVKCGRLEDARGL 301
L ACS + G+ G+ D V + ++ + GRL +A L
Sbjct: 488 VGVLAACS-----HSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDL 542
Query: 302 L-DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLW 357
+ D P E + W +++ I R A E E+ N + + Y S W
Sbjct: 543 MKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKW 602
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++A +M + + + +V G S I++ +VH F
Sbjct: 603 RDARKMRVMMEE--RGVKKVP---------GFSWIEVQNKVHTF 635
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 149/342 (43%), Gaps = 29/342 (8%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E +I ++ + +GR+ +A LF MP R+ ++NAMLAGY+ + L
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSAN----GRLPLAAS 90
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH-RNDYSSNIFVSNALLDMYRKCG 425
+ + D + +L+ A S + + + + R+ + N+ +S+ + G
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----HANHG 145
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLL 484
+ AR +F ++ +D VSWN +L Y R G+ EEA F S +W+ ++ L+
Sbjct: 146 LVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDA----ISWNALM 200
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ + + +++ +VV +V Y + + A R+F + DV
Sbjct: 201 SGYVQWGKMSEAREL----FDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 256
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+++ G+ N EA VF M + + ++++ ++ A I + A + F+ M
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
C+ + + M+ Y + G ++E + + MP V
Sbjct: 313 PCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 349
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 274/521 (52%), Gaps = 35/521 (6%)
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
GF +++L + L+ YGKC + A +FD + +N VSW ++ ++ GN E++++F
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
KM ++P +FTF+ L AC L+ G QIH + +K F+ +VV S+ +MY KC
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
GR+ +A + + RN+ISW ++++GY ++G +A LF +M E + G+
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQE---------VGGF- 171
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND--YSSN 410
+D+ T L C+ L IK G ++H F+ YS N
Sbjct: 172 ---------------------LDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVN 210
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
V+ AL+D+Y KCG L AR F + ++ +SW A++ GYA+ G E+M F +++
Sbjct: 211 TAVAGALIDLYVKCGKLFMARRVFSHIEEKH-VISWTALILGYAQEGNLAESMELFRQLR 269
Query: 471 WET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ + F +++ A+ + ++QGKQ+H F I+ +++ +++++Y KC +
Sbjct: 270 ESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMIN 329
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A R+F E + +VI MI G+ + G+EA+ +F M+ + +PD +T+ +LL C
Sbjct: 330 EAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCS 389
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V+ ++F + +GI ++EHY CM+ L R G +KE ++ V+ MP V +
Sbjct: 390 HSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIW 449
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + CR +G LG+ L L+ P + + +N +
Sbjct: 450 QTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIY 490
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 226/425 (53%), Gaps = 35/425 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N I YGKCG L A +FD M +R+ SW A++ + QNG P +L LF M
Sbjct: 7 LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL 66
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SGV N T++ L++ L + +Q+H + VK GF ++ +S++D Y KC + +
Sbjct: 67 SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINE 126
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A MF+ + +N +SWN ++ Y VAG ++A+V+F KM FTF + L ACS
Sbjct: 127 AACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSD 186
Query: 257 LSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
L + EG QIH +I F + V G+L ++YVKCG+L AR + +E+++ISWT
Sbjct: 187 LGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWT 246
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++ GYA G + E+ ELF + +R+++ +
Sbjct: 247 ALILGYAQEGNLAESMELFRQ-------------------------------LRESSIQV 275
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L ++ V A + ++ GK++H F + +I V N++LDMY KCG + A F
Sbjct: 276 DGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLF 335
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M R+ +SW ++TGY + G +EA+ F EMQ + T P T+ +L C++ +
Sbjct: 336 SEMPA-RNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLV 394
Query: 494 EQGKQ 498
E+G++
Sbjct: 395 EKGQE 399
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 174/375 (46%), Gaps = 30/375 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ + C+ AI E ++ + L+T F + + I+ Y KCG L AR +F
Sbjct: 177 FTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSH 236
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ E+ SW A++ Y Q G ++ELF + S + + ++++ A+ +
Sbjct: 237 IEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG 296
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+H +K ++ + +S++D Y KC ++ +A R+F ++ +N +SW V++ Y
Sbjct: 297 KQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKH 356
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDF 275
G GKEA+ +F +M + P + T+ L CS +G + HG+ +++
Sbjct: 357 GLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEH 416
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARE--- 331
+ ++ + GRL++A+ L+D P E N+ W +++S + G + +E
Sbjct: 417 ------YACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGG 470
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ + N +++ M Y + WKE + I ++ L AG S
Sbjct: 471 ILLRLDSENPVNYVMMSNIYADAGYWKEC-----------ERIRELVKSKKLKKEAGRSW 519
Query: 392 IKMGKEVHGFIHRND 406
+++ KEVH F +D
Sbjct: 520 VEIDKEVHFFYGGDD 534
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 183/612 (29%), Positives = 305/612 (49%), Gaps = 41/612 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS----GVSAN 142
Y +CG++ DA LFDEMPERD +W A++ NG G L + M S G N
Sbjct: 155 YARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPN 214
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGF--CGNVILESSLVDAYGKCMVMTDARRM 200
T + L + EL V LHG VK G C +V+ SSL Y KC DAR +
Sbjct: 215 SRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVV--SSLFSMYTKCDSTEDARIL 272
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F ++ K+ VSW ++ Y AG+ ++AV +F M ++P + L +
Sbjct: 273 FPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 261 YEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G H I++ +F GD V++G +L MY KC +++ A + +R+ SW+S+V
Sbjct: 333 RGGKTFHAAIVRRNF-GDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVA 391
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y +G + EL+ EM R+ K + D +L
Sbjct: 392 YCKAGLDLKCLELYREMQFRD----------------------------KDEFEYDTNSL 423
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
I++ C+ L +++G+ H + ++ N V+NAL+ MY +CGN AR F M +
Sbjct: 424 ISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIF-GMVK 482
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
+D V+W+A+++ Y+ G S++A+ + +M E +P+ T +++++CAN+++LE G+
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGEL 542
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH V E ++ ALV++Y KC L A ++F DV+ N MI G+ +
Sbjct: 543 IHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGE 602
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
+AL++F +M++ +KP+ +TF IL AC H G V + F M +Y + P L+HY
Sbjct: 603 AIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYA 661
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
CM+ L + G+++E ED V+ MP P + + C+ + +G A++ +P
Sbjct: 662 CMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPE 721
Query: 679 APFQFKITTNRF 690
+ + +N +
Sbjct: 722 NDGYYILMSNSY 733
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 230/497 (46%), Gaps = 45/497 (9%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P D WN++L + + TL M SG ++ T V ++AE L V
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 164 QLHGLIVKRGFC---GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+H V+ G G+V + SSLV Y +C + DA R+FD++ ++ V+W ++ +
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 221 VAGNGKEAVVMFFKMLRE----DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
G E + +M+R RP + T + L AC L G +HG +K
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V+ SL MY KC EDAR L + E++++SWTS++ Y +G +A ELF M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
E + D+V + +L ++++ GK
Sbjct: 308 EESGL-------------------------------QPDEVVISCLLAGLGNDAKVRGGK 336
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
H I R ++ ++ + NAL+ MY KC + A F +M +RD SW++++ Y +
Sbjct: 337 TFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDTDSWSSMVVAYCKA 395
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFET-----LLAACANISSLEQGKQIHCFVIRNCYEIN 511
G + + + EMQ+ + +F ++T ++++C+ + L G+ HC+ I++ N
Sbjct: 396 GLDLKCLELYREMQFRDK-DEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN 454
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
AL+ +Y +C + A ++F + DV+ +++I + H ++AL ++ M
Sbjct: 455 SSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 572 EGIKPDHITFHGILLAC 588
EG+KP+ T ++ +C
Sbjct: 515 EGVKPNSATLVSVISSC 531
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 171/379 (45%), Gaps = 38/379 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL-----F 131
V + N I Y KC +D A +F + +RD SW++M+ AY + G + LEL F
Sbjct: 351 VLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQF 410
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
D + N + S L LG S H +K N + ++L+ YG+C
Sbjct: 411 RDKDEFEYDTNSLISIISSCSRLGRLRLGQSA--HCYSIKHLAGENSSVANALISMYGRC 468
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
AR++F ++ K+ V+W+ ++ Y G+ K+A++++ +ML E ++P + T + +
Sbjct: 469 GNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVI 528
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+C+ L++ G IH + + E D + +L +MY+KCG+L AR + D ER+++
Sbjct: 529 SSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVV 588
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W ++SGY + G +A +LF+ M NV
Sbjct: 589 TWNVMISGYGMHGEAIQALKLFSMMERGNV------------------------------ 618
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ +T IL+ C + G+E+ + N+ ++D+ K G+L+ A
Sbjct: 619 -KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677
Query: 432 IWFYQMSQRRDKVSWNAVL 450
M D W +L
Sbjct: 678 DVVSAMPIEPDGGIWGTLL 696
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 177/414 (42%), Gaps = 40/414 (9%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH L V G + LV AY + A F +A WN ++R A +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---IDFEGDDVV 281
+ +M RP FT A + L + G +H ++ ++ +G V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY +CG + DA L D+ ER++++WT+++SG +G+
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQC--------------- 192
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD----IDQVTLGLILNVCAGLSEIKMGKE 397
E L ++ M ++ D + T+ L C L E+ +G
Sbjct: 193 ----------------GEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTC 236
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HGF + V ++L MY KC + ARI F ++ + +D VSW +++ Y R G
Sbjct: 237 LHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE-KDLVSWTSLIGAYCRAG 295
Query: 458 QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+E+A+ F M+ +P + LLA N + + GK H ++R + +V+
Sbjct: 296 HAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGN 355
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
AL+ +Y KC ++ A VF+ D +SM++ +C + LE++ M+
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 5/265 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YG+CGN D AR +F + +D +W+A++ +Y+ G L L+ M GV
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T +V+ S A L + +H + G ++ + ++LVD Y KC + AR+M
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V+WNV++ Y + G +A+ +F M R +++P + TF L AC
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG 319
+G ++ + + E + + ++ K G L++A ++ P E + W +++
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698
Query: 320 YAISGR----IREARELFNEMPERN 340
+ +R A++ F PE +
Sbjct: 699 CKMHDNFEMGLRVAKKAFASDPEND 723
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 270/547 (49%), Gaps = 37/547 (6%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M +G+S + +Y + + + L + H + + LE+S++ Y KC
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DAR++FD+++ +N VSWN I+ Y G + MF ML + +P T+ L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
S G QIH I+ + V +++ MYVKCG LE A
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAE-------------- 166
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+F +M E+N ++W ++ GYT++ +AL M +
Sbjct: 167 -----------------LVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVE 209
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D+ ++L CAGL E+ G+++HG I + S + V L+D Y KC NL SA
Sbjct: 210 LDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKA 269
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP---SKFTFETLLAACANI 490
F +S+ D VSW+A++TGY + G+ EEA+ +F ++ TR + FT+ ++ AC+ +
Sbjct: 270 FEWISEPND-VSWSALITGYCQMGEFEEALKTFESLR--TRSVDINSFTYTSIFQACSAL 326
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+ G Q H I++ A++ +Y++C L+YA RVF+ D + ++I
Sbjct: 327 ADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAII 386
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ + EAL++F M+ G++P+ +TF +L AC H G V Q+ +SM YG+
Sbjct: 387 AGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGV 446
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
++HY+CM+ +Y R G+++E + + MPF+P + + C +GE AA
Sbjct: 447 ATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAE 506
Query: 671 RLNELNP 677
L +L+P
Sbjct: 507 NLFQLDP 513
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 149/529 (28%), Positives = 245/529 (46%), Gaps = 36/529 (6%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
VS Y LF+ C K++ + R + PP FL N ++ Y KCG+L DAR +
Sbjct: 8 VSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKV 67
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FDEM ER+ SWN ++ AY +NG + +F +M N TY LRS L
Sbjct: 68 FDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGL 127
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+ KQ+H ++ G N + +++ + Y KC + A +F+ + KNAV+W I+ Y
Sbjct: 128 EIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGY 187
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
A +A+ +F KM+ E + + F+ L AC+ L G QIHG I+K+ E +
Sbjct: 188 TQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEV 247
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V L + YVKC LE A + F + E
Sbjct: 248 SVGTPLVDFYVKCSNLESAT-------------------------------KAFEWISEP 276
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
N +SW+A++ GY + ++EAL +R + DI+ T I C+ L++ G + H
Sbjct: 277 NDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAH 336
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
++ + +A++ MY +CG L A F + D V+W A++ GYA +G +
Sbjct: 337 ADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD-PDAVAWTAIIAGYAYQGNA 395
Query: 460 EEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--G 516
EA+ F MQ RP+ TF +L AC++ + +G+Q + + + Y +
Sbjct: 396 PEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ-YLESMSSNYGVATTIDHYD 454
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+V++Y++ L+ A+ + + + +LG C R E E+
Sbjct: 455 CMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGEL 503
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 19/336 (5%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+++ + + CA + + R++ ++V V + ++ Y KC NL+ A F+ +
Sbjct: 214 VFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWI 273
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
E + SW+A++ Y Q G L+ F + V N TY ++ ++ + +
Sbjct: 274 SEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGA 333
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q H +K ES+++ Y +C + A R+F+ I + +AV+W I+ Y G
Sbjct: 334 QAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQG 393
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFE 276
N EA+ +F +M +RP TF L ACS EG Q +GV ID
Sbjct: 394 NAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDH- 452
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIR----EARE 331
+ ++Y + G L++A L+ P + +SW ++ G + A
Sbjct: 453 -----YDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAEN 507
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
LF PE + + M Y WKEA + +M
Sbjct: 508 LFQLDPE-DTAGYILMFNLYASFGKWKEAANVRKMM 542
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/602 (29%), Positives = 307/602 (50%), Gaps = 33/602 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + I+ Y G + DAR +FDE+P+RD WN ML Y ++G + F M
Sbjct: 180 LFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRT 239
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S N +TY +L A + + Q+HGL++ GF + + ++LV Y KC + D
Sbjct: 240 SYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFD 299
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++F+ + + V+WN ++ Y+ G EA +F M+ ++P + TFA+ L +
Sbjct: 300 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 359
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S ++H I++ D + +L ++Y K G +E AR + Q ++ T++
Sbjct: 360 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAM 419
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGY + G +A F + + ++ +
Sbjct: 420 ISGYVLHGLNIDAINTFRWLIQEGMVP-------------------------------NS 448
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T+ +L CA L+ +K+GKE+H I + + + V +A+ DMY KCG L A +F +
Sbjct: 449 LTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRR 508
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
MS+ D + WN++++ +++ G+ E A+ F +M + + + L++ AN+ +L
Sbjct: 509 MSET-DSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYY 567
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK++H +VIRN + + AL+++Y+KC L A VF + + + NS+I + +
Sbjct: 568 GKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGN 627
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ RE L++F M + G+ PDH+TF I+ AC H G V + +F M +YGI ++E
Sbjct: 628 HGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARME 687
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ LY R G + E D + MPF P + + CR +G L + A+R L EL
Sbjct: 688 HYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLEL 747
Query: 676 NP 677
+P
Sbjct: 748 DP 749
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 168/594 (28%), Positives = 268/594 (45%), Gaps = 70/594 (11%)
Query: 7 TILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLES 66
TIL N++ K T G S V+ Y + +CA+ ++
Sbjct: 211 TILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHG 270
Query: 67 NLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP 124
++ F P V N + Y KCGNL DAR LF+ MP+ D +WN ++ Y QNGF
Sbjct: 271 LVIGSGFEFDPQV--ANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFT 328
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
LF M +GV + +T+A+ L S E L K++H IV+ +V L+S+L
Sbjct: 329 DEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSAL 388
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+D Y K + AR++F + ++ Y++ G +A+ F +++E + P +
Sbjct: 389 IDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNS 448
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
T A+ L AC+ L++ G ++H I+K E V ++T+MY KCGRL+ A +
Sbjct: 449 LTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRR 508
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
E + I W S++S ++ +G+ A +LF +M
Sbjct: 509 MSETDSICWNSMISSFSQNGKPEMAVDLFRQMG--------------------------- 541
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
+ D V+L L+ A L + GKE+HG++ RN +SS+ FV++AL+DMY KC
Sbjct: 542 ----MSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKC 597
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
G L AR F M+ +++VSWN+++ Y G + E + F EM + P TF +
Sbjct: 598 GKLALARCVFNLMAG-KNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVI 656
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
++AC + + +G IH Y C EY I + ++
Sbjct: 657 ISACGHAGLVGEG--IH---------------------YFHCMTREYGI-----GARMEH 688
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
C + G R E F +K PD + +L AC GNV+LA
Sbjct: 689 YACMVDLYG-----RAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELA 737
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 267/575 (46%), Gaps = 34/575 (5%)
Query: 4 NAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARK 63
N +I + S+S T ++ + ++ + ++ L + LF+ C+ + + +AR+
Sbjct: 7 NLCSIFRLAFSRSKLMHTAGTSICNNVMSKPETQDYLTTQLES-LFRACSDASVVQQARQ 65
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
+ + ++ + L +R + Y CG + D LF + + WN M+ G+
Sbjct: 66 VHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGW 125
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
L + M S VS ++ T+ V+++ + + +H GF ++ + S+
Sbjct: 126 FDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSA 185
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L+ Y + DARR+FD++ ++ + WNV++ Y+ +G+ A+ F M
Sbjct: 186 LIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVN 245
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
+ T+ L C+ G Q+HG++I FE D V +L MY KCG L DAR L +
Sbjct: 246 SVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFN 305
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ + ++W +++GY +G EA LFN M V + A + S+L +L
Sbjct: 306 TMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL-- 363
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+ KEVH +I R+ ++++ +AL+D+Y K
Sbjct: 364 -----------------------------RHCKEVHSYIVRHRVPFDVYLKSALIDIYFK 394
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFET 482
G++ AR F Q + D A+++GY G + +A+ +F + E P+ T +
Sbjct: 395 GGDVEMARKIF-QQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMAS 453
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L ACA +++L+ GK++HC +++ E V A+ ++Y KC L+ A F+ S D
Sbjct: 454 VLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETD 513
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
I NSMI F N + A+++F M G K D
Sbjct: 514 SICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y + GRI + LF + N + WN M+ G + AL F F M + D+ T
Sbjct: 89 YVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTF 148
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ C GL+ + + VH + ++FV +AL+ +Y G + AR F ++ Q
Sbjct: 149 PYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQ 208
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD + WN +L GY + G AM +F M+ + + T+ +L+ CA G Q
Sbjct: 209 -RDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQ 267
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H VI + +E + LV +Y+KC L A ++F D + N +I G+ N
Sbjct: 268 VHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGF 327
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
EA +F M G+KPD +TF L + + G+++
Sbjct: 328 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLR 364
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 7/269 (2%)
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
+ Y KCG LD A F M E D WN+M+ +++QNG P ++LF M SG + +
Sbjct: 491 DMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSV 550
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
+ ++ L S+A L K++HG +++ F + + S+L+D Y KC + AR +F+ +
Sbjct: 551 SLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLM 610
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
KN VSWN I+ Y G +E + +F +MLR + P + TF + AC EG+
Sbjct: 611 AGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGI 670
Query: 265 Q-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAI 322
H + + + ++Y + GRL +A + P + W +++ +
Sbjct: 671 HYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRL 730
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGY 351
G + A+ + R+++ + +GY
Sbjct: 731 HGNVELAK-----LASRHLLELDPKNSGY 754
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 5/283 (1%)
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ + T+D L + C+ S ++ ++VH I S +S+ +L +Y CG
Sbjct: 34 MSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCG 93
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+ F+ + + + + WN ++ G G + A+ + +M P K+TF ++
Sbjct: 94 RISDGGNLFFGL-ELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVI 152
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
AC ++++ +H + +++ AL+++Y + A RVF E D I
Sbjct: 153 KACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTI 212
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD-S 603
+ N M+ G+ + A+ F M+ + +T+ IL C G L Q
Sbjct: 213 LWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLV 272
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ + PQ+ + ++ +Y + G + + N MP TV
Sbjct: 273 IGSGFEFDPQVAN--TLVAMYSKCGNLFDARKLFNTMPQTDTV 313
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/605 (28%), Positives = 290/605 (47%), Gaps = 42/605 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y CG +D+A F M ERD SWN ++ + Q GF + LF M G++ ++ T+
Sbjct: 351 YSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTF 410
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+++ +A E +K L L+V+ G +V L S+L++ + + + +AR +FDD+++
Sbjct: 411 ISIIDGTARMQE---AKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKD 467
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V W I+ Y+ G+ +A+ M E + +FT AL AC+ L++ EG I
Sbjct: 468 RDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLI 527
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H I+ F V +L MY KCG LE+A
Sbjct: 528 HSHAIERGFAASPAVGNALINMYAKCGCLEEA---------------------------- 559
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+L +N++SWN + A Y + W+EAL M+ D+V+ +LN C
Sbjct: 560 ----DLVFHQCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC 615
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ SE G ++H + S+ VS ALL+MY +L A F +M + RD VSW
Sbjct: 616 SSASE---GSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRM-EFRDIVSW 671
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAA--CANISSLEQGKQIHCFV 503
NA++ G A G S EA+ F MQ E P K +F T+L A ++ SSL+Q + + +
Sbjct: 672 NAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLI 731
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
YE + + A+V ++ + L A R F+ D N ++ + +AL
Sbjct: 732 SDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQAL 791
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++F M++E +PD IT +L AC H G ++ F SM ++GI EHY C++ L
Sbjct: 792 KLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDL 851
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G + + E+ + +MP + + + C+ G + A R+ EL+P P +
Sbjct: 852 LARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVAERVMELDPRRPAAY 911
Query: 684 KITTN 688
+ ++
Sbjct: 912 VVLSS 916
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 267/542 (49%), Gaps = 35/542 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L LCA AI E R + S + + N I YGKCG ++DA +F +
Sbjct: 8 LLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPS 67
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN++L A+ ++G + ++F M G++ ++IT+ VL +L K LHG
Sbjct: 68 QVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHG 127
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+++ G NV++ +SL+ YGKC + DARR+FD + ++ VSW ++ Y+ E
Sbjct: 128 FVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVE 187
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +M + P T+A A+ AC+ + S +G IH +++ FE D VV ++
Sbjct: 188 ALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVN 247
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG LEDAR + ++ N +SW +IV+ G EA F M +
Sbjct: 248 MYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQ---------L 298
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
G T D+VT ILN C+ + + G+ ++ I + Y
Sbjct: 299 QGGSTP---------------------DKVTFITILNACSSPATLTFGELLYECILQCGY 337
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++ V N ++ MY CG + +A +F M + RD +SWN +++G+A+ G +EA+ F
Sbjct: 338 DTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVE-RDAISWNTIISGHAQAGFCDEAVHLFR 396
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M E P KFTF +++ A +++ K + ++ + E++V AL+ ++++
Sbjct: 397 RMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVESGVELDVFLVSALINMHSRYG 453
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
+ A +F + D+++ S+I + + +AL LM+ EG+ + T L
Sbjct: 454 NVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALN 513
Query: 587 AC 588
AC
Sbjct: 514 AC 515
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 212/440 (48%), Gaps = 39/440 (8%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
EA+ L +V VFL++ I + + GN+ +AR LFD+M +RD W +++ +Y
Sbjct: 422 EAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYV 481
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+G L M G+ N T L + A L K +H ++RGF +
Sbjct: 482 QHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPA 541
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ ++L++ Y KC + +A +F KN VSWN I Y+ +EA+ +F +M E
Sbjct: 542 VGNALINMYAKCGCLEEADLVFHQC-GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEG 600
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
++ +F L C SS EG +IH ++++ E D +V +L MY L++A
Sbjct: 601 LKADKVSFVTVLNGC---SSASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEAS 657
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ + + R+I+SW ++++G A G REA ++F M V
Sbjct: 658 RIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAP---------------- 701
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGL--SEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
D+++ +LN +G S +K + V I Y ++ V NA+
Sbjct: 702 ---------------DKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAI 746
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+ M+ + G L AR F ++ + RD SWN ++T +A+ G+ E+A+ F MQ E +RP
Sbjct: 747 VSMFGRSGRLAEARRAFERIRE-RDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPD 805
Query: 477 KFTFETLLAACANISSLEQG 496
T ++L+AC++ +E+G
Sbjct: 806 SITLVSVLSACSHGGLIEEG 825
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 239/499 (47%), Gaps = 40/499 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+ +L A++ + + +H + F + +++++ + YGKC + DA +F +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSL 63
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + VSWN ++ + G ++A +F +M + + P TF L C+ G
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGK 123
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+HG +++ E + +V SL +MY KCG +EDAR + D+ ++++SWTS++ Y
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R EA ELF+ M V+ +++T ++
Sbjct: 184 RCVEALELFHRMRPSGVLP-------------------------------NRITYATAIS 212
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA + + GK +H + + + S++ VS A+++MY KCG+L AR F +M + V
Sbjct: 213 ACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPH-PNTV 271
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCF 502
SWNA++ + G EA+ F MQ + + P K TF T+L AC++ ++L G+ ++
Sbjct: 272 SWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYEC 331
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ Y+ +++ ++ +Y+ C ++ A F D I N++I G EA
Sbjct: 332 ILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEA 391
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA-LQFFDSMRCKYGIIPQLEHYECMI 621
+ +F M EGI PD TF I+ +G ++ + + + G+ + +I
Sbjct: 392 VHLFRRMLAEGITPDKFTFISII-----DGTARMQEAKILSELMVESGVELDVFLVSALI 446
Query: 622 KLYCRYGYMKELEDFVNRM 640
++ RYG ++E + M
Sbjct: 447 NMHSRYGNVREARSLFDDM 465
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 4/314 (1%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D+ T +L +CA S I G+ VH + +++ + V NA + MY KCG + A +
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDA-VTV 59
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+Q +VSWN++L +AR GQ ++A F M+ + P + TF T+L C L
Sbjct: 60 FQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDL 119
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+GK +H FV+ E NV+ +L+++Y KC C+E A RVF + + DV+ SMI+ +
Sbjct: 120 SRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTY 179
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
++R EALE+F M+ G+ P+ IT+ + AC H ++ + S + G
Sbjct: 180 VQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADG-KLIHSQVLEDGFESD 238
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+ ++ +Y + G +++ + RMP +P I C ++G W +R+
Sbjct: 239 VVVSCAIVNMYGKCGSLEDAREVFERMP-HPNTVSWNAIVAACTQHGCCVEALWYFQRMQ 297
Query: 674 ELNPWAPFQFKITT 687
P + T
Sbjct: 298 LQGGSTPDKVTFIT 311
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/643 (26%), Positives = 310/643 (48%), Gaps = 47/643 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y H + C++ + A + +++V +P+P +FL N + Y + G AR L DEMP
Sbjct: 20 YLHHLRSCSAPR---HAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMP 74
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSK 163
+ S+N ++ AY++ G P +LE F S GV A++ TYA L + + L K
Sbjct: 75 RTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK 134
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H L V G G V + +SLV Y +C M AR++FD ++ VSWN +V Y+ AG
Sbjct: 135 AVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAG 194
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVV 281
+ + +F M R I +F + + C+ P + +HG ++K F+ D +
Sbjct: 195 AQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFL 254
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++ MY K G L +A LF + + NV
Sbjct: 255 ASAMVGMYAKKGALSEAVA-------------------------------LFKSVLDPNV 283
Query: 342 ISWNAMLAGYTR------SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ +NAM+AG R + + +EAL ++ + + T ++ C +I+ G
Sbjct: 284 VVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFG 343
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K++HG + ++ + + F+ +AL+D+Y G + F + ++D V+W A+++G +
Sbjct: 344 KQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSV-PKQDVVTWTAMISGCVQ 402
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
E A+T F E+ +P FT +++ ACA+++ G+QI CF ++ +
Sbjct: 403 NELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAM 462
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+ + +Y + + A+R F+E S D++ +++I + R+AL F M +
Sbjct: 463 GNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKV 522
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
P+ ITF G+L AC H G V L+++++M+ +Y + P ++H C++ L R G + + E
Sbjct: 523 VPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAE 582
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F+ F+ + R + CR + G+ A R+ EL P
Sbjct: 583 AFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQP 625
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/605 (28%), Positives = 285/605 (47%), Gaps = 47/605 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+ +CG+L R +FD MP R +W M+ AY Q G+ LEL+ M+ + + I
Sbjct: 280 HARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIAL 336
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+NVL++ + L + +H I R F ++++++ LVD Y KC + +ARR FD +
Sbjct: 337 SNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKA 396
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ +SW ++ Y G+EA+ +F M E + P + TF + ACS LSS G +
Sbjct: 397 RDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRAL 456
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H ++ D+ V +L MY K GR +
Sbjct: 457 HSRVVATGHISDEFVGNALVSMYSKFGR-------------------------------V 485
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
AR +F+ +P + SW ML T++ EAL+ + L C
Sbjct: 486 DFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSC 545
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
L ++ + +HG I +D+ ++ +SN L+++Y KCG L AR+ F QM+++ ++VSW
Sbjct: 546 TALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEK-NEVSW 604
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++ GYA+ G+ EA+ + M + +P+ F ++++CA++ +L +G+++H +
Sbjct: 605 TTMIGGYAQNGRPAEALELYKAM--DVQPNFIAFVPVISSCADLGALVEGQRVHARLSDA 662
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ N V ALV +Y KC L A F + D NSM + G + LE++
Sbjct: 663 GLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELY 722
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M +G++P+ IT +L+AC H G ++ F+ M +GI P EHY CM L R
Sbjct: 723 REMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGR 782
Query: 627 YGYMKELEDFV--------NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP- 677
G ++E E V + V C+ + AA +L EL+P
Sbjct: 783 SGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPE 842
Query: 678 -WAPF 681
AP+
Sbjct: 843 DSAPY 847
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/613 (28%), Positives = 286/613 (46%), Gaps = 66/613 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA K + +K+ + L N + Y KCG+L+++R +F+ M
Sbjct: 33 FACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAME 92
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELG-- 160
R +WN M+ AY Q+ F LE F M+ + IT+ +VL + S ++LE G
Sbjct: 93 RRTVATWNTMITAYVQHDFFQEALEAFRRMD---APPSSITFTSVLGACCSPDDLETGKA 149
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +Q+ G + + IL++SLV YGKC + DA R+F I+ KNA SW ++ Y
Sbjct: 150 IHRQIGGSSPQ--IQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYA 207
Query: 221 VAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI---DFE 276
G + A+ +F M+ E + P T+A L ACS L GM+IH +I +I E
Sbjct: 208 QNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLE 267
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
DDV+ + ++ +CG L R + D+ R +++WT++++ Y G EA EL++ M
Sbjct: 268 YDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM 327
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLILNVCAGLSEIKM 394
DI D + L +L C+ L ++
Sbjct: 328 ------------------------------------DIEPDDIALSNVLQACSRLKNLEQ 351
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G+ VH I D+ ++ V L+DMY KCG+L AR F + RD +SW +++T Y+
Sbjct: 352 GRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGF-KARDVISWTSLITAYS 410
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
EA+ F M+ E P+ TF T++ AC+ +SSL G+ +H V+ + +
Sbjct: 411 HENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEF 470
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
ALV +Y+K +++A VF M++ N EALE++ + EG
Sbjct: 471 VGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEG 530
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII------PQLEHYECMIKLYCRY 627
+P F L++C AL+ R +G+I P L ++ +Y +
Sbjct: 531 FRPGSPIFSAALVSCT-------ALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKC 583
Query: 628 GYMKELEDFVNRM 640
G +++ ++M
Sbjct: 584 GELEKARLVFDQM 596
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 174/655 (26%), Positives = 290/655 (44%), Gaps = 85/655 (12%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPV--FLLNRAIECYGKCGN 92
+ D P S + + C S + + + + P L N + YGKCG+
Sbjct: 121 RMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGS 180
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLR 151
L+DA +F + ++ SW AM+ AY QNG+ R +E+F DM G V + ITYA VL
Sbjct: 181 LEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLT 240
Query: 152 SSAEELELGVSKQLHGLIVK---RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+ + +L ++H LI + G + +L+ ++ + +C + R MFD + ++
Sbjct: 241 ACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRT 300
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
V+W ++ Y G EA+ ++ M DI P + +N L ACS L + +G +H
Sbjct: 301 VVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHS 357
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I DFE +V L +MYVKCG L +AR D R++ISWTS+++ Y+ RE
Sbjct: 358 RIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGRE 417
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A E+F+ M V + + +T +++ C+
Sbjct: 418 ALEVFHSMELEGV-------------------------------EPNSITFCTVIDACSR 446
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
LS + G+ +H + + S+ FV NAL+ MY K G + AR+ F + +R SW
Sbjct: 447 LSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKR-YPSWRV 505
Query: 449 VLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+L + G S EA+ +S + E RP F L +C + + + + IH + +
Sbjct: 506 MLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSD 565
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ ++V L+ VY KC LE A VF + + + + +MI G+ N R EALE++
Sbjct: 566 FYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYK 625
Query: 568 LMKKEGIKPDHITFHGILLAC-----------IHE------------------------G 592
M ++P+ I F ++ +C +H G
Sbjct: 626 AMD---VQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCG 682
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+ LA +FFDS C P + M Y ++G+ ++ + M P
Sbjct: 683 KLGLAREFFDSTYC-----PDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 732
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 273/579 (47%), Gaps = 53/579 (9%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ AY Q G+ LEL+ +M+ GV N T+A VL + A ++ K++H I +
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+ +L+++L++ Y KC + ++RR+F+ ++ + +WN ++ Y+ +EA+ F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI--IKIDFEGDDVVLGSLTEMYVK 291
+M D P + TF + L AC G IH I + D+++ SL MY K
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG LEDA + +N SWT++++ YA +G R A E+F +M
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDM--------------- 222
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN---DYS 408
M + + D +T +L C+ L +++ G +H IHR
Sbjct: 223 ---------------MSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLE 267
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ + + +L ++ +CG+L R F +M R V+W ++ Y +RG S EA+ +
Sbjct: 268 YDDVLQDGILSLHARCGSLVGTREMFDRMPH-RTVVTWTTMIAAYNQRGYSMEALELYHC 326
Query: 469 MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
M E P +L AC+ + +LEQG+ +H + +E +++ + LV++Y KC L
Sbjct: 327 MDIE--PDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDL 384
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A R F + DVI S+I + H GREALEVF M+ EG++P+ ITF ++ AC
Sbjct: 385 AEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDAC 444
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT--- 645
++ L + S G I ++ +Y ++G + DF RM F+
Sbjct: 445 SRLSSL-LPGRALHSRVVATGHISDEFVGNALVSMYSKFGRV----DFA-RMVFDSIPVK 498
Query: 646 -VPMLRKIFDKCRKNGYA--TLGEWAARRLNELNPWAPF 681
P R + +NG++ L ++ L P +P
Sbjct: 499 RYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPI 537
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 251/543 (46%), Gaps = 50/543 (9%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H EP +L +++ Q C+ K + + R + S + + P + + ++ Y KCG+
Sbjct: 325 HCMDIEPDDIAL-SNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGD 383
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L +AR FD RD SW +++ AY+ F LE+F M GV N IT+ V+ +
Sbjct: 384 LAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDA 443
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L + LH +V G + + ++LV Y K + AR +FD I K SW
Sbjct: 444 CSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSW 503
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
V++ G+ EA+ M+ ++ E RP + F+ AL +C+ L IHGVI
Sbjct: 504 RVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKS 563
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
DF D V+ L +Y KCG LE AR + DQ E+N +SWT+++ GYA +GR EA EL
Sbjct: 564 SDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALEL 623
Query: 333 FNEMP-ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M + N I++ +++ CA L
Sbjct: 624 YKAMDVQPNFIAFVP-----------------------------------VISSCADLGA 648
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+ VH + +N + AL++MY KCG L AR F+ + D +WN++ T
Sbjct: 649 LVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAR-EFFDSTYCPDAGAWNSMAT 707
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK-QIHCFVIRNCYE 509
YA+ G + + + EM + +P+ T ++L AC+++ LE+ + + C V +
Sbjct: 708 AYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIA 767
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFK--------ESSSLDVIICNSMILGFC--HNERG 559
+ ++ + LE A +V K E++S + LG C HN+ G
Sbjct: 768 PTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWG 827
Query: 560 REA 562
R A
Sbjct: 828 RAA 830
>gi|326521542|dbj|BAK00347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 861
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/631 (27%), Positives = 311/631 (49%), Gaps = 20/631 (3%)
Query: 80 LNRAIEC-YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE-LFLDMNHS 137
L A+ C Y + G L DA +FD M RD S++A++ + + G P E LF M +
Sbjct: 74 LANAVMCGYIRAGRLTDALEVFDRMTARDAASYSALISGHARLGSPVSAAEALFRSMRLA 133
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTD 196
G++ + T+ +L + + Q+H L K R G++++ ++L+ Y KC + D
Sbjct: 134 GLAPTKYTFVGLLTACIRRGNPRLGTQVHALAAKGRYIGGSLLVANALLGMYVKCGRLED 193
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A RMF ++ ++ SWN ++ + G +EA +F M D+ F+ + L A +
Sbjct: 194 ALRMFHGMEERDVSSWNTVLSGLVELGRYEEAFELFGDMRTSDVAVDRFSLSALLAAATE 253
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG-RLEDARGLLDQPDERNIISWTS 315
G +H + +K E D V +L Y + G +ED G+ + +++ISWT
Sbjct: 254 GFCLPHGAAVHALSLKSGLEVDLSVGNALIGFYAEHGDSVEDMVGVFQRMPVKDVISWTG 313
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-------SLLWKEALDFVFLMR 368
+++GY G + A +F MPERN +++NA+L G+ R + K L + L R
Sbjct: 314 LLNGYMEFGLVDNALGVFYRMPERNFVTYNAVLTGFCRNKESARVTFARKAGLQGLGLFR 373
Query: 369 KTTK---DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ + ++ VT+ +LN CA ++ K+ ++VH F+ + S+ ++ AL+DM KCG
Sbjct: 374 QMLENGLEMSDVTVTGVLNACAIAADRKISEQVHTFVIKCGCGSSPWIDAALIDMCIKCG 433
Query: 426 NLRSARIWF-YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS---KFTFE 481
AR+ F + Q ++W+++L R G+ E+A ++F +M + +F
Sbjct: 434 RSGDARLLFEHWRHQESFHIAWSSLLLSSFRDGEYEKAFSTFLQMFRNSDIQFIDEFLLT 493
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+L C + +E GKQ+H ++ A+V +Y KC LE A+ F+
Sbjct: 494 NVLGVCGALGFMELGKQMHLLAAKSGLLRACGVGNAIVSMYGKCGQLENAVTFFQRMPHR 553
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC--IHEGNVKLALQ 599
D++ N++I + +G E + + M++ IKPD +TF I+ AC + + ++
Sbjct: 554 DLVSWNALITAHLLHRQGDEIWDTWSEMERLVIKPDSVTFLLIISACSCTNSDSADACME 613
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
F SM KY P +EH+ ++ + R+G+ E E F+ MPF P+ + R + + C K
Sbjct: 614 LFHSMSSKYNTEPAMEHFAAVVNVLGRWGHFDEAEQFIASMPFKPSAIVWRSLLETCSKQ 673
Query: 660 GYATLGEWAARRLNELNPWAPFQFKITTNRF 690
TL A L L P P + + +N +
Sbjct: 674 SNMTLRRRAMNHLLALEPQDPSTYVLASNLY 704
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 199/466 (42%), Gaps = 75/466 (16%)
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
Y + + N + Y KCG L+DA +F M ERD SWN +L + G ELF
Sbjct: 170 YIGGSLLVANALLGMYVKCGRLEDALRMFHGMEERDVSSWNTVLSGLVELGRYEEAFELF 229
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-----CGN--------- 177
DM S V+ ++ + + +L ++ E L +H L +K G GN
Sbjct: 230 GDMRTSDVAVDRFSLSALLAAATEGFCLPHGAAVHALSLKSGLEVDLSVGNALIGFYAEH 289
Query: 178 ------------------VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV--- 216
VI + L++ Y + ++ +A +F + +N V++N ++
Sbjct: 290 GDSVEDMVGVFQRMPVKDVISWTGLLNGYMEFGLVDNALGVFYRMPERNFVTYNAVLTGF 349
Query: 217 -------RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
R G + + +F +ML + + T L AC+ + Q+H
Sbjct: 350 CRNKESARVTFARKAGLQGLGLFRQMLENGLEMSDVTVTGVLNACAIAADRKISEQVHTF 409
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD--QPDERNIISWTSIVSGYAISGRIR 327
+IK + +L +M +KCGR DAR L + + E I+W+S++ G
Sbjct: 410 VIKCGCGSSPWIDAALIDMCIKCGRSGDARLLFEHWRHQESFHIAWSSLLLSSFRDGEYE 469
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
+A F +M + I + ID+ L +L VC
Sbjct: 470 KAFSTFLQMFRNSDIQF-----------------------------IDEFLLTNVLGVCG 500
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
L +++GK++H ++ V NA++ MY KCG L +A + F+Q RD VSWN
Sbjct: 501 ALGFMELGKQMHLLAAKSGLLRACGVGNAIVSMYGKCGQLENA-VTFFQRMPHRDLVSWN 559
Query: 448 AVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISS 492
A++T + Q +E ++SEM+ +P TF +++AC+ +S
Sbjct: 560 ALITAHLLHRQGDEIWDTWSEMERLVIKPDSVTFLLIISACSCTNS 605
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 267/530 (50%), Gaps = 36/530 (6%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCM--VMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++H L+V G CG +L S+ + C+ M AR+MFD + ++ WN ++R Y
Sbjct: 47 RIHALVVTNG-CGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYAD 105
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
AG +EA+ ++ M + P N+TF + +C+ LS+ EG ++H I+K F+ D V
Sbjct: 106 AGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFV 165
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY + SG +F EM RN+
Sbjct: 166 QSSLVAMYSQ-------------------------------SGETLGMELVFGEMVVRNI 194
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SW A++AGY ++ +KE L M + + VTL +L CAGL + +GK +HG+
Sbjct: 195 VSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGY 254
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ ++NAL+ +Y KCGN+ +AR F M + + VSWNA++ Y +
Sbjct: 255 GIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ-NLVSWNAMIAAYEQNNAGAN 313
Query: 462 AMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F MQ E + T ++++ACA++ +L G+ +H V R EINV AL++
Sbjct: 314 AVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALID 373
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC ++ A VF+ V+ SMI + G +AL++F MK EG+KP+ T
Sbjct: 374 MYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFT 433
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F + AC H G V+ + F+SM Y I+P +EH CM+ L R G + E +F+++M
Sbjct: 434 FAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKM 493
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P P V + + CR + L E A +L L+P + + +N +
Sbjct: 494 PVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIY 543
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 200/408 (49%), Gaps = 33/408 (8%)
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+D AR +FD+MP+RD WN ++ Y G L L+ +M+ +G+ + T+ V+R
Sbjct: 77 TMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVR 136
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
S A L K++H IVK GF +V ++SSLV Y + +F ++ +N VS
Sbjct: 137 SCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS 196
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W ++ Y+ KE + +F +M+ +P T + L AC+ L G IHG I
Sbjct: 197 WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI 256
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K+ + D + +L +Y KCG +E AR L D +N++SW ++++ Y + A +
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF M V D D +T+ +++ CA L
Sbjct: 317 LFRRMQAEKV-------------------------------DFDYITMVSVISACASLGA 345
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+ +H + R N+ ++NAL+DMY KCGN+ AR F ++ R VSW +++
Sbjct: 346 LNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPC-RSVVSWTSMIG 404
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
A G E+A+ FS M+ E +P+ FTF + AC + +E+G++
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK 452
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 200/449 (44%), Gaps = 36/449 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y+ + + + CA A+ E +++ N+V VF+ + + Y + G
Sbjct: 126 PDNYT-FPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMEL 184
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F EM R+ SW A++ Y QN + L +F +M SG N +T +VL + A
Sbjct: 185 VFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEF 244
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + K +HG +K G +V L ++L+ YGKC + AR +FD + +N VSWN ++
Sbjct: 245 LNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAA 304
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G AV +F +M E + T + + AC+ L + G +H ++ + E +
Sbjct: 305 YEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEIN 364
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L +MY KCG ++ AR + ++ R+++SWTS++ A G +A +LF+ M +
Sbjct: 365 VSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKD 424
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V + T + C ++ G++
Sbjct: 425 EGV-------------------------------KPNSFTFAAVFTACRHSGLVEEGRKH 453
Query: 399 HGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+ R DYS V + ++D+ + G+L A + +M D W A+L G R
Sbjct: 454 FESMMR-DYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL-GSCRI 511
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLA 485
+ E +E + P TF L++
Sbjct: 512 HSNLELAELVAEKLFLLDPQTVTFYVLMS 540
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 149/307 (48%), Gaps = 19/307 (6%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P V L N I YGKCGN++ AR LFD M ++ SWNAM+ AY QN ++LF M
Sbjct: 262 PDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRM 321
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
V + IT +V+ + A L + +H L+ ++G NV + ++L+D Y KC +
Sbjct: 322 QAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNI 381
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
AR +F+ + ++ VSW ++ G+G++A+ +F +M E ++P +FTFA AC
Sbjct: 382 DLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTAC 441
Query: 255 SFLSSPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PD 306
EG M+ + ++ ++ + ++ + G L +A +D+ P
Sbjct: 442 RHSGLVEEGRKHFESMMRDYSIMPGVEH------CACMVDLLGRAGSLMEAYEFIDKMPV 495
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNE----MPERNVISWNAMLAGYTRSLLWKEALD 362
E ++ W +++ I + E EL E + + V + M Y + W++A
Sbjct: 496 EPDVSVWGALLGSCRIHSNL-ELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAAR 554
Query: 363 FVFLMRK 369
LM +
Sbjct: 555 LRKLMEE 561
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 11/263 (4%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC---GNLRSARIWFYQMS 438
+LN C+ L ++ +H + N N+ +S L+ C + AR F QM
Sbjct: 35 LLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLI--ITACCLAPTMDYARKMFDQMP 89
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGK 497
+RD WN ++ GYA G EEA+ +S M P +TF ++ +CA +S+L +GK
Sbjct: 90 -KRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGK 148
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
++HC ++++ ++ +V + +LV +Y++ VF E +++ ++I G+ N
Sbjct: 149 EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNR 208
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+E L VF M G +P+ +T +L AC + L + K G+ P +
Sbjct: 209 YFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLG-KLIHGYGIKLGVDPDVSLT 267
Query: 618 ECMIKLYCRYGYMKELEDFVNRM 640
+I LY + G ++ + M
Sbjct: 268 NALIALYGKCGNVETARSLFDGM 290
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/653 (26%), Positives = 302/653 (46%), Gaps = 46/653 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLL------NRAIECYGKCGNLDDARGLFD 101
L +L S ++ R L + L+T P LL + + CY G+L AR +FD
Sbjct: 65 LLRLLPSCGTLLSLRVLHARLLTH---PQGLLLGSLRARTKLLSCYAALGDLASARMVFD 121
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS---GVSANQITYANVLRSSAEELE 158
P D S+ AML Q + L DM + + + L++ E
Sbjct: 122 GTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAE 181
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ LH +K G ++ +SLVD Y K + AR++F+ I ++N VSW ++
Sbjct: 182 YSYGRSLHCDAIKVGGADGFVM-NSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISG 240
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ G + +++F KM ++++ P +T A + ACS L ++G +HG +IK +
Sbjct: 241 CVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSN 300
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L +MYVKCG L+ AR +F+E+
Sbjct: 301 SFISAALLDMYVKCGELD-------------------------------HARCVFDELSY 329
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+++ W M+ GYT++ +AL R + VT +L+ A L ++ +GK +
Sbjct: 330 IDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSI 389
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG + V NAL+DMY KC + A F ++S + D V+WN++++GYA
Sbjct: 390 HGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNK-DVVAWNSMISGYAENNM 448
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
++A+ F +M + + P + L+A + L GK IH + +++ + N+ A
Sbjct: 449 GDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTA 508
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC L A RVF E + + + +MI G+ ++ +FG M K+G+ P+
Sbjct: 509 LLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPN 568
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
I F IL C H G V ++FDSM + I P ++HY CM+ + R G +++ +F+
Sbjct: 569 DIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFI 628
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP + C + E A +R+ L+P P + + +N +
Sbjct: 629 DNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLY 681
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 207/446 (46%), Gaps = 37/446 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y++ A + C++ + + R + +++ F+ ++ Y KCG LD AR
Sbjct: 264 PSEYTI-ATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARC 322
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FDE+ D W M+ YTQNG P L LFLD + ++ N +T A VL +SA+ +
Sbjct: 323 VFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRD 382
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + K +HGL VK G ++ ++LVD Y KC +++A R+F I NK+ V+WN ++
Sbjct: 383 LSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISG 442
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G +A+++F +M + P + NAL A L G IHG +K F +
Sbjct: 443 YAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSN 502
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L +Y KCG L AR + D+ ++RN ++W +++ GY + G + LF EM +
Sbjct: 503 IYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLK 562
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V + + IL+ C+ + GK
Sbjct: 563 DGVYP-------------------------------NDIAFTSILSTCSHSGMVTAGKRY 591
Query: 399 HGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG---YA 454
+ ++ + + ++ ++D+ + GNL A + M + D W A L G ++
Sbjct: 592 FDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHS 651
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTF 480
R +EEA+ + E RP +
Sbjct: 652 RLQFAEEAIKRMMVLHPE-RPDLYVL 676
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 143/292 (48%), Gaps = 17/292 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y KC + +A +F + +D +WN+M+ Y +N L LF M+ G S
Sbjct: 406 NALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSS 465
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ I+ N L +S +L + K +HG VK F N+ ++++L++ Y KC + ARR+
Sbjct: 466 PDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRV 525
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD++ ++N+V+W ++ Y + G+ ++ +F +ML++ + P + F + L CS
Sbjct: 526 FDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCS----- 580
Query: 261 YEGMQIHG------VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISW 313
+ GM G + + + ++ + G LEDA +D P + + W
Sbjct: 581 HSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVW 640
Query: 314 TSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEAL 361
+ + G + R++ A E M PER + + + YT + +W ++L
Sbjct: 641 GAFLHGCELHSRLQFAEEAIKRMMVLHPERPDL-YVLISNLYTSNGMWDKSL 691
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 287/587 (48%), Gaps = 102/587 (17%)
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF- 232
F G L ++L+ AY + + DARR+FD + ++N S+N ++ G +A+ +F
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 233 -----------------------------FKMLREDIRPLN-FTFANALFACSFLSSPYE 262
+ D LN ++FA+AL AC+ +
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165
Query: 263 GMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G Q+H ++ K G DV +G+ L +MY KC R E
Sbjct: 166 GEQVHALVTK-SSHGSDVYIGTALVDMYAKCERPE------------------------- 199
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
EA+++F+ MPERN++SWN+++ Y ++ EAL M K D+VTL
Sbjct: 200 ------EAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLAS 253
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+++ CAGL+ + G++VH + ++D + ++ ++NAL+DMY KCG A+ F +M+ R
Sbjct: 254 VMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIR 313
Query: 441 ------------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
++ V+WN ++ YA + EEA+ F ++
Sbjct: 314 SVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLK 373
Query: 471 WETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY------EINVVCRGALVEVYT 523
E+ P+ +T+ +L ACAN+++L+ G+Q H V++ + E +V +LV++Y
Sbjct: 374 RESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYL 433
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K + +VF+ ++ D + N+MI+G+ N R ++AL +F M +PD +T G
Sbjct: 434 KTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIG 493
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G VK ++F SM +GIIP +HY CMI L R G++KE+E+ + MP
Sbjct: 494 VLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPME 553
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + CR + +GEWAA +L EL+P + + +N +
Sbjct: 554 PDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMY 600
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 242/434 (55%), Gaps = 9/434 (2%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P F N + + G DDA LF +P+ D S+NA++ A Q+G G L
Sbjct: 77 PHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLA 136
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M+ N ++A+ L + A E +Q+H L+ K +V + ++LVD Y KC
Sbjct: 137 AMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCE 196
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+A+++FD + +N VSWN ++ Y G EA+ +F +M+++ P T A+ +
Sbjct: 197 RPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMS 256
Query: 253 ACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC+ L++ EG Q+H ++K D F D V+ +L +MY KCGR +A+ + D+ R+++
Sbjct: 257 ACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVV 316
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S TS+++GYA S + +A+ +F +M E+NV++WN ++A Y + +EAL +++ +
Sbjct: 317 SETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRES 376
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVH------GFIHRNDYSSNIFVSNALLDMYRKCG 425
T G +LN CA L+ +++G++ H GF + S++FV N+L+DMY K G
Sbjct: 377 VWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTG 436
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLL 484
++ F +M+ RD VSWNA++ GYA+ G++++A+ F M RP T +L
Sbjct: 437 SISDGAKVFERMAA-RDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVL 495
Query: 485 AACANISSLEQGKQ 498
+AC + +++G++
Sbjct: 496 SACGHSGLVKEGRR 509
>gi|242043708|ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
gi|241923102|gb|EER96246.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
Length = 691
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 253/485 (52%), Gaps = 7/485 (1%)
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+NV++ L G + A+ + +M+ +D + P FT+ L AC+ ++ G +H
Sbjct: 126 YNVLISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVRA 185
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+G +L MY KCG + ARG+ + + R+++SW S++SGYA SG+ REA
Sbjct: 186 ADAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAV 245
Query: 331 ELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
ELF M E N ++WN + GY + ++ A+ + M + ID VTL + N C
Sbjct: 246 ELFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNAC 305
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ +++GKE+HG R V NA++ MY +C ++ A + ++M + V+W
Sbjct: 306 SRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHA-LMLFRMMRCPGLVAW 364
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
N ++ G+A +E A F EM + +P+ T T LA CA +++L+ G+++H +I+
Sbjct: 365 NTMIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHIIK 424
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
++ + +L+++Y+K L A VF D+I SMI GF +G +L
Sbjct: 425 QGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRF 484
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F M GI PD I +L AC H G V + FD M YGI PQ+EHY CM+ LY
Sbjct: 485 FKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKSYGIKPQMEHYSCMVDLYA 544
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKI 685
R G +++ E+ +N+ PF PT M+ + C + G +GE +ARRL E+ + +
Sbjct: 545 RAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTDNAGHYVL 604
Query: 686 TTNRF 690
N +
Sbjct: 605 IANMY 609
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/529 (21%), Positives = 226/529 (42%), Gaps = 88/529 (16%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L++FY P FL + G PE +N ++ A +G P
Sbjct: 99 LLSFYSNHPSFLPAASSLAAGSTS------------PE----PYNVLISACLSHGLPRHA 142
Query: 128 LELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L + +M + V + TY VLR+ AE L + + +H G G++ +++LV
Sbjct: 143 LAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVRAADAGMDGHLFCQNALVS 202
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM----------- 235
Y KC + AR +F+ +++++ VSWN ++ Y +G +EAV +F +M
Sbjct: 203 MYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNSVT 262
Query: 236 --------------------LREDIR---PLNF-TFANALFACSFLSSPYEGMQIHGVII 271
+R+ +R ++F T ACS G +IHG+ +
Sbjct: 263 WNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAV 322
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
++ D V+ ++ MY +C +E A L +++W ++++G+A+S A
Sbjct: 323 RMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASR 382
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F EM +V + VT+ L +CA ++
Sbjct: 383 IFREMVCSDV-------------------------------QPNYVTVVTYLALCARVAN 411
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ G+E+H I + + + N+L+DMY K G L A+ F M D +S+ +++
Sbjct: 412 LQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDD-HDMISFTSMIA 470
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G+ +G+ ++ F M P T+L+AC++ +++G+++ ++++ Y I
Sbjct: 471 GFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMVKS-YGI 529
Query: 511 NVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+V++Y + LE A + ++ + ++G CH +
Sbjct: 530 KPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQ 578
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 152/344 (44%), Gaps = 37/344 (10%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K P Y + + CA + + R + +F N + Y KCG++
Sbjct: 152 KDAVPPDAFTYPKVLRACAETANLALGRAVHVRAADAGMDGHLFCQNALVSMYAKCGDVV 211
Query: 95 DARGLFDEMPERDGGSWNAML-----------------------------------GAYT 119
ARG+F+ M RD SWN+M+ G Y
Sbjct: 212 AARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNSVTWNTIAGGYI 271
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV- 178
Q + L DM G S + +T + + L + K++HGL V R C +
Sbjct: 272 QMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAV-RMQCHEID 330
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++++ Y +C M A +F ++ V+WN ++ + ++ + + A +F +M+
Sbjct: 331 SVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCS 390
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
D++P T L C+ +++ G ++H IIK F+G ++ SL +MY K GRL A
Sbjct: 391 DVQPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVA 450
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+ + D D+ ++IS+TS+++G+ + G+ + F M + ++
Sbjct: 451 QNVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIM 494
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 130/298 (43%), Gaps = 11/298 (3%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
++N I Y +C +++ A LF M +WN M+ + + +F +M S
Sbjct: 332 VINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSD 391
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
V N +T L A L ++LH I+K+GF G +L +SL+D Y K ++ A+
Sbjct: 392 VQPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQ 451
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+FD + + + +S+ ++ + + G G ++ F +M+ I P L ACS
Sbjct: 452 NVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSG 511
Query: 259 SPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ---PDERNIISWT 314
EG ++ ++K + + ++Y + G LE A LL+Q P +++
Sbjct: 512 LVDEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVA-- 569
Query: 315 SIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
++V G I R AR L EM N + + Y + W E LMR
Sbjct: 570 ALVGACHEQGNIIIGERSARRLL-EMKTDNAGHYVLIANMYAAAGCWNELATVRKLMR 626
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 294/625 (47%), Gaps = 46/625 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM--N 135
F+ N + YG+CG +DDA +F+ M R+ SWNA++ A P R LELF D +
Sbjct: 100 FVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD---PRRGLELFRDCLED 156
Query: 136 HSGVSA-NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G +A ++ T VL A + +HGL VK G+ + + LVD Y KC M
Sbjct: 157 LGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEM 216
Query: 195 TDARRMFDDI---QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFAN 249
DA F + +N VSWNV++ Y G A + +M E+ + T +
Sbjct: 217 ADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLS 276
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L CS L + ++H +++ D+V +L Y +CG L A + D +
Sbjct: 277 VLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSK 336
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ SW +++ +A +G A ELF E +
Sbjct: 337 MVSSWNALIGAHAQNGEASAAIELFRE------------------------------MTN 366
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ D ++G +L C L + GK HGFI RN + F+ +LL +Y +CG
Sbjct: 367 ACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRES 426
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR---PSKFTFETLLA 485
AR+ F + + +D+VSWN ++ GY++ G E++ F EMQ + PS + L
Sbjct: 427 LARVLFDAV-EEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALV 485
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
AC+ + ++ GK++HCF ++ + +++++Y+KC ++ A F + D +
Sbjct: 486 ACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVS 545
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
MI G+ N RG+EA+ ++ M +EG++PD T+ G+L+AC H G ++ L FF MR
Sbjct: 546 WTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMR 605
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
I +LEHY C+I + R G + + MP P +L + C +G LG
Sbjct: 606 NLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELG 665
Query: 666 EWAARRLNELNPWAPFQFKITTNRF 690
+ A +L EL P + + +N +
Sbjct: 666 KKVADKLLELEPHKAEHYVLASNMY 690
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 244/554 (44%), Gaps = 60/554 (10%)
Query: 111 WNAMLGAYTQNGFPGRTLELF--LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
WN +L ++ G L + L GV+ ++ T L+S + +Q+H +
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGD----DGRQVHAV 88
Query: 169 IVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
K G G+ + +SLV YG+C + DA ++F+ + +N VSWN ++ G E
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148
Query: 228 AVVMFFKMLREDI----RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
F+ ED+ P T L C+ L+ P G +HG+ +K ++ V
Sbjct: 149 ----LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204
Query: 284 SLTEMYVKCGRLEDAR-GLLDQPD--ERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
L +MY KCG + DA L+ P RN++SW ++ GYA +G A L EM
Sbjct: 205 VLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ--- 261
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
M + D++T+ +L VC+GL E+ +E+H
Sbjct: 262 --------------------------MEERGVPADEITMLSVLPVCSGLPELAKLRELHA 295
Query: 401 F-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
F + R + + V NAL+ Y +CG L A F + + SWNA++ +A+ G++
Sbjct: 296 FVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVS-SWNALIGAHAQNGEA 354
Query: 460 EEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
A+ F EM +P F+ +LL AC N+ L GK H F++RN E + R +
Sbjct: 355 SAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVS 414
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM--KKEGIK 575
L+ VY +C A +F D + N+MI G+ N E+L++F M KK G
Sbjct: 415 LLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHW 474
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKLYCRYGYMKE 632
P + L+AC V+L + M C K + +I +Y + G + +
Sbjct: 475 PSLLAATSALVACSELPAVRLGKE----MHCFALKADLCEDSFLSSSIIDMYSKCGSVDD 530
Query: 633 LEDFVNRMPFNPTV 646
F +R+ V
Sbjct: 531 ARVFFDRLKAKDAV 544
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/617 (30%), Positives = 307/617 (49%), Gaps = 42/617 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ + + G DDA+ +F++M R+ S N ++ + ++F +M V N
Sbjct: 797 VSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINS 855
Query: 144 ITYANVLRSSAE--ELELGVSK--QLHGLIVKRGFCGN-VILESSLVDAYGKCMVMTDAR 198
+Y +L + +E LE G K ++H +++ G N V + + LV+ Y K + DA
Sbjct: 856 DSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADAC 915
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+F+ + K++VSWN ++ ++A F +M R P NFT + L +C+ L
Sbjct: 916 SVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLG 975
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QIH +K+ + D V +L +Y
Sbjct: 976 WIMLGEQIHCDGLKLGLDTDVSVSNALLALY----------------------------- 1006
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQV 377
A +G E ++F+ MPE + +SWN+++ + S +A+ + M + + +V
Sbjct: 1007 --AETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRV 1064
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T IL+ + LS ++ ++H + + S + + NALL Y KCG + F +M
Sbjct: 1065 TFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 1124
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISSLEQG 496
S+ RD+VSWN++++GY +AM + MQ R FTF T+L+ACA++++LE+G
Sbjct: 1125 SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERG 1184
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
++H IR C E +VV ALV++Y+KC ++YA R F+ +V NSMI G+ +
Sbjct: 1185 MEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARH 1244
Query: 557 ERGREALEVFGLMKKEGIKPDHIT-FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
G +AL++F M +G PDH+ G+L AC H G V+ + F SM Y + P++E
Sbjct: 1245 GHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVE 1304
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNGYAT-LGEWAARRLN 673
H+ CM+ L R G + E+ DF+N MP P V + R + CR NG T LG AA L
Sbjct: 1305 HFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLL 1364
Query: 674 ELNPWAPFQFKITTNRF 690
EL P + + N +
Sbjct: 1365 ELEPQNAVNYVLLANMY 1381
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 170/636 (26%), Positives = 289/636 (45%), Gaps = 64/636 (10%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
KT + H + S + L S EAR+L + + +FL N I Y
Sbjct: 530 KTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIY 589
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
+ G+L A+ LFDEM R+ +W ++ YTQNG P F DM +G N +
Sbjct: 590 VRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFG 649
Query: 148 NVLRSSAEE----LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM-VMTDARRMFD 202
+ LR+ E +LGV Q+HGLI K + +V++ + L+ YG C+ DAR +FD
Sbjct: 650 SALRACQESGPSGCKLGV--QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFD 707
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI----RPLNFTFANALFACSFLS 258
I +N++SWN I+ Y G+ A +F M +E + +P +TF + + A S
Sbjct: 708 RIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAA--CS 765
Query: 259 SPYEGM----QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S G+ Q+ + K F D V +L + + G +DA+ + +Q RN++S
Sbjct: 766 SVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMN 825
Query: 315 SIVSGYAISGRIREARELFNEMPER---NVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
++ G + A ++F+EM + N S+ +L+ ++ + +E
Sbjct: 826 GLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGR---------- 875
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSA 430
+ G+EVH + R + N + + N L++MY K G + A
Sbjct: 876 ---------------------RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 914
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
F M + +D VSWN++++G + SE+A SF M+ + PS FT + L++CA+
Sbjct: 915 CSVFELMVE-KDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCAS 973
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ + G+QIHC ++ + +V AL+ +Y + C ++VF D + NS+
Sbjct: 974 LGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSV 1033
Query: 550 ILGFCHNERG-REALEVFGLMKKEGIKPDHITFHGILLAC----IHEGNVKLALQFFDSM 604
I +E +A++ F M + G +TF IL A +HE + ++ ++
Sbjct: 1034 IGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI-----HAL 1088
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
KY + ++ Y + G M E E RM
Sbjct: 1089 VLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM 1124
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 227/493 (46%), Gaps = 45/493 (9%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+++LH +K GF GN+ L ++L++ Y + + A+++FD++ N+N V+W ++ Y
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFAC--SFLSSPYEGMQIHGVIIKIDFEGDD 279
G EA F M+R P ++ F +AL AC S S G+QIHG+I K + D
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 280 VVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VV L MY C DAR + D+ RN ISW SI+S Y+ G A +LF+ M
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQ- 741
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG--- 395
KE L F F ++ T G + + A S + G
Sbjct: 742 -------------------KEGLGFSF-------KPNEYTFGSL--ITAACSSVDFGLCV 773
Query: 396 -KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+++ + ++ + +++V +AL+ + + G A+ F QM R+ VS N ++ G
Sbjct: 774 LEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGV-RNVVSMNGLMVGLV 832
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ----GKQIHCFVIRNCYEI 510
++ Q E A F EM+ + ++ LL+A + S LE+ G+++H VIR
Sbjct: 833 KQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLND 892
Query: 511 NVVCRG-ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
N V G LV +Y K + A VF+ D + NS+I G NE +A E F M
Sbjct: 893 NKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRM 952
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFF-DSMRCKYGIIPQLEHYECMIKLYCRYG 628
++ G P + T L +C G + L Q D + K G+ + ++ LY G
Sbjct: 953 RRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL--KLGLDTDVSVSNALLALYAETG 1010
Query: 629 YMKELEDFVNRMP 641
E + MP
Sbjct: 1011 CFTECLKVFSLMP 1023
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 36/424 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + Y K G + DA +F+ M E+D SWN+++ QN E FL M
Sbjct: 895 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRR 954
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+G + T + L S A + + +Q+H +K G +V + ++L+ Y + T+
Sbjct: 955 TGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTE 1014
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVA-GNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
++F + + VSWN ++ + + +AV F +M+R TF N L A S
Sbjct: 1015 CLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVS 1074
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNIISWT 314
LS QIH +++K D + +L Y KCG + + + + E R+ +SW
Sbjct: 1075 SLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWN 1134
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++SGY + NE L +A+D V+ M + + +
Sbjct: 1135 SMISGY-----------IHNE--------------------LLHKAMDLVWFMMQKGQRL 1163
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D T +L+ CA ++ ++ G EVH R S++ V +AL+DMY KCG + A F
Sbjct: 1164 DSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYAS-RF 1222
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETL--LAACANISS 492
+++ R+ SWN++++GYAR G E+A+ F+ M + +P L L+AC+++
Sbjct: 1223 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGF 1282
Query: 493 LEQG 496
+E+G
Sbjct: 1283 VEEG 1286
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 207/451 (45%), Gaps = 35/451 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +++L + L CAS I+ ++ + + V + N + Y + G +
Sbjct: 959 PSNFTLISTL-SSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLK 1017
Query: 99 LFDEMPERDGGSWNAMLGAYTQN-GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F MPE D SWN+++GA + + + ++ FL+M G +++T+ N+L S+ L
Sbjct: 1018 VFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL-SAVSSL 1076
Query: 158 ELG-VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVI 215
L VS Q+H L++K + + ++L+ YGKC M + ++F + + ++ VSWN +
Sbjct: 1077 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 1136
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y+ +A+ + + M+++ R +FTFA L AC+ +++ GM++H I+
Sbjct: 1137 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACM 1196
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D VV +L +MY KCGR++ A + RN+ SW S++SGYA G +A +LF
Sbjct: 1197 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLF-- 1254
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
TR +L + D V + V V G K
Sbjct: 1255 ----------------TRMMLDGQPPDHVAPLLGVLSACSHVGF-----VEEGFEHFKSM 1293
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
EV+ R ++ S ++D+ + G L + M + + + W VL R
Sbjct: 1294 SEVYRLSPRVEHFS------CMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCR 1347
Query: 456 -RGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
G++ E +EM E P LLA
Sbjct: 1348 ANGRNTELGRRAAEMLLELEPQNAVNYVLLA 1378
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 14/265 (5%)
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+E+H + + N+F+SN L+++Y + G+L SA+ F +MS R+ V+W +++GY
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSN-RNLVTWACLISGYT 621
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAAC--ANISSLEQGKQIHCFVIRNCYEIN 511
+ G+ +EA F +M + P+ + F + L AC + S + G QIH + + Y +
Sbjct: 622 QNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSD 681
Query: 512 VVCRGALVEVYTKCC-CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
VV L+ +Y C A VF + I NS+I + A ++F M+
Sbjct: 682 VVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQ 741
Query: 571 KEGI----KPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHYECMIKL 623
KEG+ KP+ TF ++ A +V L + M K G + L ++
Sbjct: 742 KEGLGFSFKPNEYTFGSLITAAC--SSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSG 799
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPM 648
+ R+G + ++ +M V M
Sbjct: 800 FARFGLTDDAKNIFEQMGVRNVVSM 824
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/569 (29%), Positives = 280/569 (49%), Gaps = 47/569 (8%)
Query: 124 PGRTLEL--FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
P R L+ + M G S Y +L E LG +K LHG +VK G ++ +
Sbjct: 57 PPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVA 116
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+SLV+ Y +C DAR +FD++ KN V+W ++ Y + A+ +F +ML+
Sbjct: 117 TSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRY 176
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P ++T L AC + G Q+HG IK + SL +Y K G LE
Sbjct: 177 PSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESG--- 233
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE-A 360
IR F +P++NVI+W M++ + E
Sbjct: 234 ------------------------IRA----FKRIPDKNVITWTTMISACAEDENYTELG 265
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
L+ M K ++ TL ++++C ++ +GK+V GF + ++N+ V N+ + +
Sbjct: 266 LNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYL 325
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR-----------RGQSEEAMTSFSEM 469
Y + G A F +M + ++WNA+++G+A+ R + +A+ F ++
Sbjct: 326 YLRKGETEEAMRLFEEM-EDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDL 384
Query: 470 -QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ +P FTF ++L+ C+ + +LEQG+QIH I+ + +VV ALV +Y KC C+
Sbjct: 385 VRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCI 444
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
EYA + F E + ++ SMI G+ + R +A+++F M G KP+ ITF +L AC
Sbjct: 445 EYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSAC 504
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ G V+ A+++FD M+ +Y I P ++HY CMI ++ R G + + F+ R F P +
Sbjct: 505 SYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAI 564
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ CR +G L +AA RL EL P
Sbjct: 565 WSSLVAGCRSHGNMELAFYAADRLLELKP 593
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/632 (23%), Positives = 295/632 (46%), Gaps = 64/632 (10%)
Query: 5 AATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKL 64
+ +L+N ++ P+P ++ LK + V ++Y L C + ++ A+ L
Sbjct: 45 STQVLENGRLEAPPRPLDAQEAM----AMLKEGQSVQSAMYVPLLHRCIETGSLGGAKAL 100
Query: 65 ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP 124
++V +F+ + Y +CGN DAR LFDEMPE++ +W A++ YT N P
Sbjct: 101 HGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQP 160
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
LE+F++M G + T +L + + + KQ+HG +K G + +SL
Sbjct: 161 VLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSL 220
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE-AVVMFFKMLREDIRPL 243
Y K + R F I +KN ++W ++ N E + +F ML+ ++ P
Sbjct: 221 CRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPN 280
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
FT + + C G Q+ G KI + V S +Y++ G E+A L +
Sbjct: 281 EFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFE 340
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ++ ++I+W +++SG+A I +A + RS ++ F
Sbjct: 341 EMEDNSVITWNAMISGFA-------------------QIMDSAKDDLHARSRGFQALKIF 381
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
L+R K D T IL+VC+ + ++ G+++H + + S++ V++AL++MY K
Sbjct: 382 RDLVRSAMKP-DLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
CG + A F +M R V+W ++++GY++ G+ +A+ F +M +P++ TF +
Sbjct: 441 CGCIEYATKAFVEMPTRT-LVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVS 499
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LL+AC+ +E+ + + +++N Y I L++ Y C ++ +R+ + LD
Sbjct: 500 LLSACSYAGLVEEAMR-YFDMMQNEYHIE-----PLMDHYG--CMIDMFVRLGR----LD 547
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+ + +K++G +P+ + ++ C GN++LA D
Sbjct: 548 ---------------------DAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586
Query: 603 SMRCKYGIIPQ-LEHYECMIKLYCRYGYMKEL 633
+ + P+ +E Y ++ +Y G +++
Sbjct: 587 RL---LELKPKVVETYVLLLNMYISTGRWRDV 615
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 189/696 (27%), Positives = 323/696 (46%), Gaps = 67/696 (9%)
Query: 10 KNILSKSSPKPTPS----KTLTKTISGHLKSDEPVSYSLYAHL---------------FQ 50
+ +L + P+P P+ L ++G L Y+L H
Sbjct: 49 RRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALRLYALLNHAARPAPRSDHYTYSCALT 108
Query: 51 LCASSKAIVEARKLESNLVTFYPTPP--VFLLNRAIECYGKC-----GNLDDARGLFDEM 103
CA S+ + R + ++L+ + P L N + Y C G +D R LFD M
Sbjct: 109 ACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAM 168
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+++ SWN + G Y + G P LE+F M GV +++ NV +A +
Sbjct: 169 PKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVF-PAAGSGDPSWPF 227
Query: 164 QLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
L+GL++K G + ++ + SS + + + + AR +FD KN WN ++ Y+
Sbjct: 228 LLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQ 287
Query: 222 AGNGKEAVVMFFKMLREDIRPLNF-TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +A+ +F ++L P + TF +A+ A S G Q+HG ++K V
Sbjct: 288 NGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLPV 347
Query: 281 VLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+LG +L MY +CG ++ A ELF+ +PE+
Sbjct: 348 ILGNALVVMYSRCGN-------------------------------VQTAFELFDRLPEK 376
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+++SWN M+ + ++ E L V+ M+K+ D VTL +L+ + ++++GK+ H
Sbjct: 377 DIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSH 436
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G++ R+ S L+DMY K G + A+ F RD+V+WNA++ GY + GQ
Sbjct: 437 GYLIRHGIEGEGLESY-LIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQP 495
Query: 460 EEAMTSFSEM-QWETRPSKFTFETLLAACANISS-LEQGKQIHCFVIRNCYEINVVCRGA 517
E+A+ F M + P+ T ++L AC + + GKQIH F +R+ + NV A
Sbjct: 496 EQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTA 555
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y+KC + A VF + + +MI G + G AL +F M+ +G+KPD
Sbjct: 556 LVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPD 615
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF + AC + G V L + SM +G+ +H+ C++ L + G + E DFV
Sbjct: 616 AVTFLAAISACNYSGLVDEGLSLYRSMET-FGLAATPQHHCCIVDLLAKAGRVDEAYDFV 674
Query: 638 NRMPFNPT-VPMLRKIFDKCRKNGYATLGEWAARRL 672
+ + + + + C+ G L WA ++
Sbjct: 675 ESLGEDGNFIAIWGSLLASCKAQGKMELAAWATEKV 710
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/575 (24%), Positives = 271/575 (47%), Gaps = 50/575 (8%)
Query: 89 KCGNLDDARGLFDEMPERDGGSW--NAMLGAYTQNGFPGRTLELFLDMNHSGVSA---NQ 143
K G L+ AR L + R + N +L AY P L L+ +NH+ A +
Sbjct: 41 KQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALRLYALLNHAARPAPRSDH 100
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMV-----MTD 196
TY+ L + A L + + +H +++R +L +SL++ Y C +
Sbjct: 101 YTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDV 160
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+FD + KN VSWN + Y+ G EA+ MF +ML + +RP +F N +F +
Sbjct: 161 VRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVN-VFPAAG 219
Query: 257 LSSPYEGMQIHGVIIK--IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
P ++G++IK +++ D V+ S M+ + ++ AR + D+ ++NI W
Sbjct: 220 SGDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWN 279
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++++GY +G+ +A +LF + + ++ D+
Sbjct: 280 TMITGYVQNGQFSQAMDLFIQ----------------------------ILGSKEVPSDV 311
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIW 433
VT + + ++++G+++HG++ + +S+ + + NAL+ MY +CGN+++A
Sbjct: 312 --VTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFEL 369
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F ++ + +D VSWN ++T + + E + +MQ P T +L+A +N
Sbjct: 370 FDRLPE-KDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGD 428
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMIL 551
L+ GKQ H ++IR+ E + L+++Y+K ++ A RVF + D + N+MI
Sbjct: 429 LQIGKQSHGYLIRHGIEGEGL-ESYLIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIA 487
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G+ + + +A+ F M + G++P +T +L AC G A + S ++ +
Sbjct: 488 GYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIHSFALRHSLD 547
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ ++ +Y + G + E+ M TV
Sbjct: 548 TNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTV 582
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 301/643 (46%), Gaps = 77/643 (11%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT--QNGFPGRTLEL 130
PTP V N + Y +CG+L A LFD MP RD ++N+++ A + P L+
Sbjct: 92 PTPAVS--NALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLP--ALDA 147
Query: 131 FLDMNHSGVSANQITYANVLRSS---AEELELGVSKQLHGLIVKRGFC-GNVILE-SSLV 185
DM G T +VL + AE+L LG ++ H +K GF G+ ++L+
Sbjct: 148 LRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLG--REAHAFALKNGFLDGDERFAFNALL 205
Query: 186 DAYGKCMVMTDARRMF-----DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
Y + ++ DA+ +F D+ V+WN +V + +G EA+ + + M+ +
Sbjct: 206 SMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGV 265
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDAR 299
RP TFA+AL ACS L G ++H ++K D + V +L +MY R+ AR
Sbjct: 266 RPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAAR 325
Query: 300 GLLDQ--PDERNIISWTSIVSGYAISGRIREARELFNEM-PERNVISWNAMLAGYTRSLL 356
+ D ER + W +++ GYA +G +A ELF M E V+ +AG
Sbjct: 326 LVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAG------ 379
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE-VHGFIHRNDYSSNIFVSN 415
+L CA SE GKE VHG++ + + N FV N
Sbjct: 380 -------------------------VLPSCA-RSETFAGKEAVHGYVVKRGMADNPFVQN 413
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR- 474
AL+D+Y + G++ +AR W + + RD VSWN ++TG +G +A EMQ + R
Sbjct: 414 ALMDLYARLGDMDAAR-WIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRF 472
Query: 475 ------------------PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
P+ T TLL CA +++ +GK+IH + +R+ + +V
Sbjct: 473 TDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGS 532
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM-KKEGIK 575
ALV++Y KC CL + VF +VI N +I+ + + G EA+ +F M + K
Sbjct: 533 ALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAK 592
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ +TF L AC H G V L+ F SM+ +G+ P + + C + + R G + E
Sbjct: 593 PNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYR 652
Query: 636 FVNRM-PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++ M P V CR + LGE AA RL EL P
Sbjct: 653 IISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEP 695
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L CA A +++ V V + + ++ Y KCG L +R +FD +P R+
Sbjct: 499 LLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRN 558
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVL 150
+WN ++ AY +G + LF M S N++T+ L
Sbjct: 559 VITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAAL 602
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 272/535 (50%), Gaps = 26/535 (4%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HGLI K L +Y +D ++ FD V +V R A
Sbjct: 13 FHGLIFKSNL---------LSSSYASQKRFSD-KKFFDSKLEDGGV----VVERLCRANR 58
Query: 225 GKEAVVMFF--KMLREDI-------RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
EA+ + K+LRE + +P T+ N + CS + EG ++H I F
Sbjct: 59 FGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 118
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
V+ + MY KCG L DAR + D+ ER++ SW +V+GYA G + EAR LF+E
Sbjct: 119 VPGIVIWNRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDE 178
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV-TLGLILNVCAGLSEIKM 394
MPER+ SW AM+ GY + +EAL LM++ + T+ + A + I+
Sbjct: 179 MPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRR 238
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GKE+HG I R S+ + ++L+DMY KCG + AR F ++ + D VSW +++ Y
Sbjct: 239 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDK-DVVSWTSMIDRYF 297
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ + E + FSE+ RP+++TF +L ACA++++ E G+Q+H ++ R ++
Sbjct: 298 KSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSF 357
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+L+++YTKC +E A V D++ S+I G+ N + EAL+ F L+ K G
Sbjct: 358 ASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSG 417
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
KPDH+TF +L AC H G V+ L+FF S+ K+ + +HY C++ L R G ++L
Sbjct: 418 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQL 477
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ ++ MP P+ + + C G L E AA+ L ++ P P + N
Sbjct: 478 KSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMAN 532
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 228/497 (45%), Gaps = 81/497 (16%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S Y +L Q+C+ ++A+ E +K+ ++ T P + + NR + Y KCG+L DAR +FDE
Sbjct: 88 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDE 147
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-----------VSANQITYANVLR 151
MPERD SWN M+ Y + G LF +M V +Q A VL
Sbjct: 148 MPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLY 207
Query: 152 SSAEELE---------------------LGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
S + + + K++HG IV+ G + +L SSL+D YGK
Sbjct: 208 SLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 267
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + +AR +FD I +K+ VSW ++ RY + +E +F +++ RP +TF+
Sbjct: 268 CGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGV 327
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC+ L++ G Q+HG + ++ F+ SL +MY KCG +E AR ++D + ++
Sbjct: 328 LNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDL 387
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S TS++ GYA +G+ EA + F+ L+ K+
Sbjct: 388 VSLTSLIGGYAQNGKPDEALKYFD-------------------------------LLLKS 416
Query: 371 TKDIDQVTLGLILNVC--AGLSEIKMG-----KEVHGFIHRNDYSSNIFVSNALLDMYRK 423
D VT +L+ C AGL E + E H H +D+ + L+D+ +
Sbjct: 417 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYT------CLVDLLAR 470
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTF 480
G + +M + K W +VL G + G +EEA +++ E + T
Sbjct: 471 SGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTM 530
Query: 481 ETLLAACANISSLEQGK 497
+ AA E+GK
Sbjct: 531 ANIYAAAGKWE--EEGK 545
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/595 (26%), Positives = 291/595 (48%), Gaps = 35/595 (5%)
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD M R+ SWNAM+ Y G + LELF+ M V + +T +++ AE
Sbjct: 211 LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGS 270
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + KQ+H L +K F ++ + ++L++ Y + + ++F+ + N++A WN ++
Sbjct: 271 LKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISA 330
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-EGMQIHGVIIKIDFEG 277
Y G +EA+ +F +M E ++ T L C L+S +G +H +IK
Sbjct: 331 YAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRI 390
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D + +L MY + +E +++F+ M
Sbjct: 391 DASLGNALLSMYTELNCVE-------------------------------SVQKIFDRMK 419
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ISWN M+ R+ L +A + MR++ + T+ IL C ++ + G+
Sbjct: 420 GVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRS 479
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG++ ++ N + AL DMY CG+ +AR F + RD +SWNA++ Y +
Sbjct: 480 IHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLF-EGCPDRDLISWNAMIASYVKNN 538
Query: 458 QSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVCR 515
Q+ +A+ F M E P+ T +L++ ++++L QG+ +H +V R + + ++
Sbjct: 539 QAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLA 598
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
A + +Y +C L+ A +FK ++I N+MI G+ N RG +A+ F M ++G +
Sbjct: 599 NAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFR 658
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ +TF +L AC H G +++ LQ F SM + + P+L HY C++ L R G + E +
Sbjct: 659 PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEARE 718
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F++ MP P + R + CR A + +L++L P + + +N +
Sbjct: 719 FIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVY 773
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 157/598 (26%), Positives = 275/598 (45%), Gaps = 38/598 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA+ A+ + + ++ V + ++ Y KCG ++DAR +FD M +RD
Sbjct: 59 VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRD 118
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WNAM+ Y G + L +M + N T +L + EL + + +HG
Sbjct: 119 VVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHG 178
Query: 168 LIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
++ G F N + ++L+ Y + M +FD + +N VSWN ++ Y G+
Sbjct: 179 YCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYF 237
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+A+ +F +ML ++++ T A+ AC+ L S G QIH + IK +F D +L +L
Sbjct: 238 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 297
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY G LE + L + R+ W S++S YA G EA +LF M V
Sbjct: 298 NMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKK--- 354
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL-SEIKMGKEVHGFIHRN 405
D+ T+ ++L++C L S + GK +H + ++
Sbjct: 355 ----------------------------DERTVVIMLSMCEELASGLLKGKSLHAHVIKS 386
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ + NALL MY + + S + F +M + D +SWN ++ AR +A
Sbjct: 387 GMRIDASLGNALLSMYTELNCVESVQKIFDRM-KGVDIISWNTMILALARNTLRAQACEL 445
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F M + E +P+ +T ++LAAC +++ L+ G+ IH +V+++ EIN R AL ++Y
Sbjct: 446 FERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMN 505
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C A +F+ D+I N+MI + N + +AL +F M E +P+ +T +
Sbjct: 506 CGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINV 564
Query: 585 LLACIHEGNVKLALQFFDSM-RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L + H + + R + + L I +Y R G ++ E+ +P
Sbjct: 565 LSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 236/485 (48%), Gaps = 34/485 (7%)
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+D WN+++ L + M GV N T VL++ A + + K +
Sbjct: 16 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H I +V + +++VD Y KC + DAR +FD + +++ V WN +V Y+ G
Sbjct: 76 HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA+++ +M RE++RP + T L AC S G +HG ++
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR------------- 182
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
G+ D N T+++ G+ + +R LF+ M RN++SWN
Sbjct: 183 -------------NGMFDS----NPHVATALI-GFYLRFDMRVLPLLFDLMVVRNIVSWN 224
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AM++GY + +AL+ M D VT+ + + CA L +K+GK++H +
Sbjct: 225 AMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKF 284
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++ ++++ NALL+MY G+L S+ F + R D WN++++ YA G EEAM
Sbjct: 285 EFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR-DAPLWNSMISAYAAFGCHEEAMDL 343
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISS-LEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F MQ E + + T +L+ C ++S L +GK +H VI++ I+ AL+ +YT
Sbjct: 344 FIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYT 403
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
+ C+E ++F +D+I N+MIL N +A E+F M++ IKP+ T
Sbjct: 404 ELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIIS 463
Query: 584 ILLAC 588
IL AC
Sbjct: 464 ILAAC 468
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 247/499 (49%), Gaps = 41/499 (8%)
Query: 50 QLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
Q CA ++ +++ + F +++LN + Y G+L+ + LF+ +P RD
Sbjct: 263 QACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAP 322
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV--SKQLHG 167
WN+M+ AY G ++LF+ M GV ++ T ++ S EEL G+ K LH
Sbjct: 323 LWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVV-IMLSMCEELASGLLKGKSLHA 381
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++K G + L ++L+ Y + + +++FD ++ + +SWN ++ +
Sbjct: 382 HVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQ 441
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A +F +M +I+P ++T + L AC ++ G IHG ++K E + + +L +
Sbjct: 442 ACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALAD 501
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY+ CG AR L + +R++ISW ++++ Y + + +A LF+ M
Sbjct: 502 MYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI---------- 551
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ + + VT+ +L+ L+ + G+ +H ++ R +
Sbjct: 552 ----------------------SEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGF 589
Query: 408 S--SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
S ++ ++NA + MY +CG+L+SA F + +R+ +SWNA++ GY G+ +AM +
Sbjct: 590 SLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAGYGMNGRGSDAMLA 648
Query: 466 FSEMQWET-RPSKFTFETLLAACANISSLEQGKQI-HCFVIRNCYEINVVCRGALVEVYT 523
FS+M + RP+ TF ++L+AC++ +E G Q+ H V +V +V++
Sbjct: 649 FSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLA 708
Query: 524 KCCCLEYAIRVFKESSSLD 542
+ C++ A R F +S ++
Sbjct: 709 RGGCIDEA-REFIDSMPIE 726
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 200/439 (45%), Gaps = 35/439 (7%)
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
IQ K+ WN +++ N + + + +M + P N T L AC+ ++ G
Sbjct: 13 IQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 72
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IH I D D V ++ + Y KCG +ED
Sbjct: 73 KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVED-------------------------- 106
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
AR +F+ M +R+V+ WNAM+ GY ++EA+ V M + + T+ +L
Sbjct: 107 -----ARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALL 161
Query: 384 NVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
C G SE+++G+ VHG+ RN + SN V+ AL+ Y + ++R + F M R+
Sbjct: 162 LACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVV-RN 219
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHC 501
VSWNA+++GY G +A+ F +M E + T + ACA + SL+ GKQIH
Sbjct: 220 IVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQ 279
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+ + ++ AL+ +Y+ LE + ++F+ + D + NSMI + E
Sbjct: 280 LAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEE 339
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+++F M+ EG+K D T +L C + L + + K G+ ++
Sbjct: 340 AMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALL 399
Query: 622 KLYCRYGYMKELEDFVNRM 640
+Y ++ ++ +RM
Sbjct: 400 SMYTELNCVESVQKIFDRM 418
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 189/418 (45%), Gaps = 35/418 (8%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+ +++ + L ++++ L N + Y + ++ + +FD M D SWN M
Sbjct: 370 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTM 429
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ A +N + ELF M S + N T ++L + + L + +HG ++K
Sbjct: 430 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSI 489
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
N L ++L D Y C AR +F+ +++ +SWN ++ Y+ +A+++F +
Sbjct: 490 EINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHR 549
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVVLG-SLTEMYVKC 292
M+ E P + T N L + + L++ +G +H + + F G D+ L + MY +C
Sbjct: 550 MISE-AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARC 608
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G L+ A + +RNIISW ++++GY ++GR +A F++M E G+
Sbjct: 609 GSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLED----------GFR 658
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV-HGFIHRNDYSSNI 411
+ VT +L+ C+ I+MG ++ H + + + +
Sbjct: 659 P---------------------NGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPEL 697
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ ++D+ + G + AR + M D W A+L+ +++A T F ++
Sbjct: 698 VHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 755
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 136/297 (45%), Gaps = 19/297 (6%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ TL L+L CA + ++ GK +H I D ++ V A++D Y KCG + AR F
Sbjct: 52 NNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVF 111
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSL 493
MS RD V WNA++ GY G EEAM EM E RP+ T LL AC S L
Sbjct: 112 DAMSD-RDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASEL 170
Query: 494 EQGKQIHCFVIRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL----DVIICNS 548
G+ +H + +RN ++ N AL+ Y L + +RV L +++ N+
Sbjct: 171 RLGRGVHGYCLRNGMFDSNPHVATALIGFY-----LRFDMRVLPLLFDLMVVRNIVSWNA 225
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI G+ +ALE+F M + +K D +T + AC G++KL Q + K+
Sbjct: 226 MISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIH-QLAIKF 284
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+ L ++ +Y G ++ +P N P+ + + YA G
Sbjct: 285 EFVEDLYILNALLNMYSNNGSLESSHQLFESVP-NRDAPLWNSMI-----SAYAAFG 335
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/609 (28%), Positives = 288/609 (47%), Gaps = 90/609 (14%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I + + G +D AR +FD++ + SWNA++ Y N P +LF M
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER------ 76
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
N I + LV Y K ++++AR++FD
Sbjct: 77 ---------------------------------NTISWNGLVSGYVKNGMISEARKVFDK 103
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +N VSW +VR Y+ G EA ++F++M +++ + E
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRV----DEA 159
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++ +I D ++G L GRL +AR + D+ +RN+++WTS++SGYA++
Sbjct: 160 RRLFDMIPVKDVVASTNMIGGLCSE----GRLSEAREIFDEMPQRNVVAWTSMISGYAMN 215
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLI 382
++ AR+LF MP++N ++W AML GYTRS EA + F + K + + +G
Sbjct: 216 NKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFG 275
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
LN G + AR W + + +D
Sbjct: 276 LN----------------------------------------GEVGKAR-WVFDQMKEKD 294
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
+W+A++ Y R+G EA+ FS MQ E RP+ + ++L+ C +++SL+ G+Q+H
Sbjct: 295 DGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHS 354
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
++R+ +++++ L+ +Y KC L RVF SS D+++ NS+I G+ + G +
Sbjct: 355 QLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK 414
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
ALEVF M G PD ITF G+L AC + G VK L+ F+SM+ KY + + EHY CM+
Sbjct: 415 ALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMV 474
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
L R G + E + + MP + + CR + L E AA++L +L P +
Sbjct: 475 DLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAG 534
Query: 682 QFKITTNRF 690
+ + +N +
Sbjct: 535 PYILLSNLY 543
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 215/446 (48%), Gaps = 53/446 (11%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+K EA+KL + P N + Y K G + +AR +FD+MPER+ SW +M
Sbjct: 60 NKRPAEAQKLFDKM----PERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSM 115
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ Y Q G LF M N +++ +L E+ + +++L +I +
Sbjct: 116 VRGYVQEGLIDEAELLFWRMPEK----NVVSWTVMLGGLIEDGRVDEARRLFDMIPVK-- 169
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
+V+ ++++ +++AR +FD++ +N V+W ++ Y A N K V
Sbjct: 170 --DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGY--AMNNKVDV----- 220
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
A LF ++ + ++V ++ + Y + GR
Sbjct: 221 -------------ARKLF-------------------EVMPDKNEVTWTAMLKGYTRSGR 248
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+ +A L + + + ++ G+ ++G + +AR +F++M E++ +W+A++ Y R
Sbjct: 249 INEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERK 308
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
EAL LM++ + ++ IL+VC L+ + G++VH + R+ + +I+VS
Sbjct: 309 GFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVS 368
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWET 473
+ L+ MY KCG+L + + F + S +D V WN+++ GYA+ G E+A+ F EM
Sbjct: 369 SVLITMYIKCGDLVTGKRVFDRFSS-KDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGA 427
Query: 474 RPSKFTFETLLAACANISSLEQGKQI 499
P + TF +L+AC +++G +I
Sbjct: 428 APDEITFIGVLSACGYTGKVKEGLEI 453
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 2/256 (0%)
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
+ L P PV N I +G G + AR +FD+M E+D G+W+A++ Y + GF
Sbjct: 253 AELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFEL 312
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
L LF M GV N + ++L L +Q+H +V+ F ++ + S L+
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLI 372
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC + +R+FD +K+ V WN I+ Y G G++A+ +F +M P
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEI 432
Query: 246 TFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
TF L AC + EG++I + K + + ++ + G+L +A L++
Sbjct: 433 TFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIEN 492
Query: 305 -PDERNIISWTSIVSG 319
P E + I W +++S
Sbjct: 493 MPVEADAIVWGALLSA 508
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +C S ++ R++ S LV + +++ + I Y KCG+L + +FD +D
Sbjct: 336 ILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKD 395
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
WN+++ Y Q+GF + LE+F +M SG + ++IT+ VL +
Sbjct: 396 IVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSA 440
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 185/634 (29%), Positives = 308/634 (48%), Gaps = 44/634 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I + K G + DAR LFD MP+R+ SWN+M+ AY N +LF M +
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLY 109
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ + R+ EL ++ L L+ + N + +++V Y K +ARR+
Sbjct: 110 SWTLMITCYTRNG----ELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRL 162
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + K+ VSWN ++ Y G + + F +M D+ N + L+S
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNL-MVDGFVEVGDLNSS 221
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+E + KI + V ++ + + G++ +AR L DQ RN+++W ++++ Y
Sbjct: 222 WEFFE------KIP-NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAY 274
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV---------------- 364
+ + EA LF EMPE+N ISW ++ GY R EA +
Sbjct: 275 VQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMIS 334
Query: 365 -FLMRKTTKDIDQV--TLGLILNVC-----AGLSEI-KMGKEVHGFIHRNDYSSNIFVSN 415
++ K D Q+ + + VC AG S+ +M + +H F + +I N
Sbjct: 335 GYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLF--KQMVKKDIVSWN 392
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
++ Y + G + +A F +M + ++ VSWN++++G + G +A+ SF M E +
Sbjct: 393 TMVASYAQVGQMDAAIKIFEEMKE-KNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQK 451
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P + TF L++CA++++L+ GKQ+H V+++ Y ++ AL+ +Y KC + A +
Sbjct: 452 PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELL 511
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
FK+ DV+ NS+I + N GREAL++F M+ EG+ PD +TF GIL AC H G +
Sbjct: 512 FKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLI 571
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
L+ F M Y I P EHY CM+ L R G ++E V M N + +
Sbjct: 572 DQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLG 631
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
CR +G L ++AA +L E P + + +N
Sbjct: 632 ACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSN 665
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 230/520 (44%), Gaps = 59/520 (11%)
Query: 149 VLRSSAEELELGVSKQLHGLI--VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
V R + + +LG S Q+ I + N + +S++ A+ K ++DAR++FD +
Sbjct: 15 VFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQ 74
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY----E 262
+N VSWN ++ YL +EA +F KM D L++ + + + Y E
Sbjct: 75 RNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRD-----------LYSWTLMITCYTRNGE 123
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
+ + + ++ + V ++ Y K + ++AR L D ++++SW S+++GY
Sbjct: 124 LAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTR 183
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G +R + F EM ER+V+SWN M+ G+ + +F K + T+ +
Sbjct: 184 NGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFF------EKIPNPNTVSWV 237
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+C G + E + N+ NA++ Y + ++ A F +M + ++
Sbjct: 238 TMLC-GFARFGKIAEARRLFDQMPI-RNVVAWNAMIAAYVQNCHVDEAISLFMEMPE-KN 294
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFT----------------------- 479
+SW V+ GY R G+ +EA ++M + ++
Sbjct: 295 SISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISI 354
Query: 480 -----FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
+ T++A + +++ +H F + + ++V +V Y + ++ AI++
Sbjct: 355 RDVVCWNTMIAGYSQCGRMDEA--LHLF--KQMVKKDIVSWNTMVASYAQVGQMDAAIKI 410
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F+E +++ NS+I G N +AL+ F LM EG KPD TF L +C H +
Sbjct: 411 FEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAAL 470
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
++ Q + K G L +I +Y + G + E
Sbjct: 471 QVGKQ-LHQLVMKSGYATDLFVSNALITMYAKCGSISSAE 509
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 160/379 (42%), Gaps = 51/379 (13%)
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
K G++++A + +N ++ S++S +A +GRI +AR+LF+ MP+RN++SWN+M+A
Sbjct: 27 KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAA 86
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y + +EA M T+D+ TL + G E+ + + + Y N
Sbjct: 87 YLHNDRVEEARQLFDKM--PTRDLYSWTLMITCYTRNG--ELAKARNLFNLL---PYKWN 139
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM- 469
NA++ Y K AR F M +D VSWN++LTGY R G+ + F EM
Sbjct: 140 PVCCNAMVAGYAKNRQFDEARRLFDAMPA-KDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 198
Query: 470 ----------------------QWE-----TRPSKFTFETLLAACANISSLEQGKQI-HC 501
WE P+ ++ T+L A + + +++
Sbjct: 199 ERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQ 258
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
IR NVV A++ Y + C ++ AI +F E + I ++I G+ + E
Sbjct: 259 MPIR-----NVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDE 313
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A ++ M + G + + A Q F+ + + + + MI
Sbjct: 314 ARQLLNQMPYRNVAAQTAMISGY----VQNKRMDDARQIFNQISIRDVVC-----WNTMI 364
Query: 622 KLYCRYGYMKELEDFVNRM 640
Y + G M E +M
Sbjct: 365 AGYSQCGRMDEALHLFKQM 383
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA A+ ++L ++ +F+ N I Y KCG++ A LF ++ D SW
Sbjct: 464 CAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSW 523
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N+++ AY NG L+LF M GV+ +++T+ +L + + +G+ Q GL +
Sbjct: 524 NSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACS---HVGLIDQ--GLKLF 578
Query: 172 RGFCGNVILE------SSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN 224
+ +E + +VD G+ + +A ++ ++ N NA W ++ + GN
Sbjct: 579 KCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGN 638
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 272/548 (49%), Gaps = 37/548 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T +++L ++ L LH ++K G +V + + +++ Y KC T AR++FD++
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
KN VSW+ ++ Y AG + A+ ++ +M + P + FA+ + AC+ LS+ G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+IH +K +E V SL MY+KC + DA
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDAL------------------------- 156
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+F PE N +S+NA++ G+ + + L+F LMR+ D+ +L
Sbjct: 157 ------SVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLG 210
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+C +K G E+H + + S F+ N ++ MY + ++ A F ++ + +D +
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAF-RLIEEKDVI 269
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCF 502
SWN ++ + + + F M ET RP FTF + LAACA ++S+ GKQIH
Sbjct: 270 SWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAH 329
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++R ++ ALV +Y KC C+ YA +F + +++ N++I GF ++ G A
Sbjct: 330 LMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERA 389
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+E+F M GI+PD +TF G+L AC H G V +F+SM YGI P +EH+ C+I
Sbjct: 390 VELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLID 449
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
+ R G + E E+++ + PF +L + R +G +GE A+ L +L P
Sbjct: 450 MLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSP 509
Query: 683 FKITTNRF 690
+ + +N +
Sbjct: 510 YVLLSNLY 517
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 208/452 (46%), Gaps = 37/452 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C+ +KA+ L + ++ VF+ N + Y KCG+ AR +FDEM E++
Sbjct: 9 LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW+AM+ Y Q G P ++L+ M + N+ +A+V+ + A + + +++H
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHS 125
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+K G+ + +SL+ Y KC +DA +F + N VS+N ++ + V E
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF-VENQQLE 184
Query: 228 AVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+ FFK++R+ + P F F L C+ + G ++H +K++ + + +
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVII 244
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY + +++A +E+++ISW ++++ + + +F M E
Sbjct: 245 TMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTE-------- 296
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+T D T L CAGL+ + GK++H + R
Sbjct: 297 ----------------------ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTR 334
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
++ V NAL++MY KCG + A F +M + VSWN ++ G+ G E A+ F
Sbjct: 335 LYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVH-HNLVSWNTIIAGFGNHGLGERAVELF 393
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+M RP TF LL AC + +++G+
Sbjct: 394 EQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 18/323 (5%)
Query: 30 ISGHLKSDEP-VSYSLYAHLFQL------------CASSKAIVEARKLESNLVTFYPTPP 76
ISG+ ++ EP ++ LY+ +F + CAS A+ +K+ S + F
Sbjct: 76 ISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESI 135
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
F+ N I Y KC DA +F PE + S+NA++ + +N R LE F M
Sbjct: 136 SFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQ 195
Query: 137 SGVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ ++ + VL ++ E L+ G +LH VK + + ++ Y + ++
Sbjct: 196 QGLIPDRFAFMGVLGICTTTENLKRGA--ELHCQTVKLNLDSTPFIGNVIITMYSELNLI 253
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFA 253
+A + F I+ K+ +SWN ++ + + + +F M E ++RP +FTF +AL A
Sbjct: 254 QEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAA 313
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L+S G QIH +++ D V +L MY KCG + A + + N++SW
Sbjct: 314 CAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSW 373
Query: 314 TSIVSGYAISGRIREARELFNEM 336
+I++G+ G A ELF +M
Sbjct: 374 NTIIAGFGNHGLGERAVELFEQM 396
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 19/300 (6%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
+C +++ + +L V F+ N I Y + + +A F + E+D S
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVIS 270
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
WN ++ A + + L +F M + V + T+ + L + A + KQ+H +
Sbjct: 271 WNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHL 330
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
++ ++ + ++LV+ Y KC + A +F + + N VSWN I+ + G G+ AV
Sbjct: 331 MRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAV 390
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVL 282
+F +M IRP + TF L AC+ +G + +G+ I+
Sbjct: 391 ELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEH------F 444
Query: 283 GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFNEMP 337
L +M + GRL +A + + P + + S++S + G + R A+ L P
Sbjct: 445 SCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQP 504
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 184/681 (27%), Positives = 314/681 (46%), Gaps = 76/681 (11%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG + +A +F EMPERD SWNA++ Y + LF++M +G++ N
Sbjct: 102 VDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNS 161
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFD 202
T +L + E LEL + +++HG ++ G F + + ++LV Y + + + R+F
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVL-SHRVFS 220
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR--------------------- 241
+ +N VSWN I+ +L G+ +A+ ++ ML E I+
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRL 280
Query: 242 -------PLNFTFANALFACSFL-------------------------------SSPYEG 263
+ F N LF + L S Y G
Sbjct: 281 GMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIG 340
Query: 264 MQIHG----VIIKIDFEGDDVVLGSLTEMYVKCGRLEDA----RGL----LDQPDERNII 311
H + IK+ E + ++ M C L D RGL + E +
Sbjct: 341 FGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAY 400
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+++S Y +I A+ +F +M +VISWN M++ + +S+ +A + +M ++
Sbjct: 401 LGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESE 460
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ T+ +L C S++ G+ +HGF +N N ++ +L +MY CG+ R+A
Sbjct: 461 IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAT 520
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANIS 491
F + QR D VSWN++++ Y + + +A+ F+ M E P+ T +L +C ++
Sbjct: 521 NMFTRCPQR-DLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLA 579
Query: 492 SLEQGKQIHCFVIRN--CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
L G+ +H + R E++ A + +Y +C L+YA ++F + ++ N+M
Sbjct: 580 HLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAM 639
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + RGR+A F M +G KP++++F +L AC H G LQ F SM +G
Sbjct: 640 ITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFG 699
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I PQL HY CM+ L R G+ E F+N MP P + R + C+ L E
Sbjct: 700 IAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIF 759
Query: 670 RRLNELNPWAPFQFKITTNRF 690
+L EL P P F + +N +
Sbjct: 760 GKLVELEPSNPGNFILLSNIY 780
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 216/464 (46%), Gaps = 39/464 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ Q CA + +L + F +F+LN + Y G+L+ + LF+ +P D
Sbjct: 268 VIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSD 327
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV--SKQL 165
WN+M+ +Y GF + LF+ M + + T A ++ S +L G + L
Sbjct: 328 AALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIA-IMLSLCNDLNDGSIWGRGL 386
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +K G + L ++L+ Y K +T A+ +F+ ++ + +SWN ++ + +
Sbjct: 387 HAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFR 446
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+A +F M +I+ ++T + L C S G IHG IK E + + SL
Sbjct: 447 AKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSL 506
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
TEMY+ CG A + + +R+++SW S++S Y + +A LFN M
Sbjct: 507 TEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-------- 558
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+ + + VT+ IL C L+ + +G+ +H + R
Sbjct: 559 ------------------------SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 406 DYSSNIFVS--NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S + S NA + MY +CG L+ A F + Q R VSWNA++TGY G+ +A
Sbjct: 595 EVSLEMDASLANAFITMYARCGKLQYAEKIFCTL-QTRSIVSWNAMITGYGMHGRGRDAT 653
Query: 464 TSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+F++M + +P+ +F ++L+AC++ G Q+ ++R+
Sbjct: 654 LAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRD 697
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 226/481 (46%), Gaps = 36/481 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN+++ +T+ L + M G++ + T VL++ +G ++H I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+V + ++LVD Y KC ++ +A ++F ++ ++ VSWN ++ Y+ KEAV+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMY 289
+F +M + + P + T L AC + G +IHG ++ F+ D V +L Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
++ + R + RNI+SW +I++G+ G +A +L++ M
Sbjct: 208 MRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSM------------- 253
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
E + F D VT+ +++ CA +++G ++H + + +
Sbjct: 254 -------LIEGIKF-----------DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLIN 295
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++F+ NALL+MY G+L S+ F + D WN++++ Y G EA+ F +M
Sbjct: 296 DLFILNALLNMYSDNGSLESSWALFNAVPT-SDAALWNSMISSYIGFGFHAEAIALFIKM 354
Query: 470 QWE-TRPSKFTFETLLAACANISSLE-QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
+ E + T +L+ C +++ G+ +H +++ E++ AL+ +Y K
Sbjct: 355 RLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQ 414
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+ A VF++ LDVI N+MI F + +A E+F +M + IK + T +L
Sbjct: 415 ITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAF 474
Query: 588 C 588
C
Sbjct: 475 C 475
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 181/387 (46%), Gaps = 37/387 (9%)
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN I++ + N + + +M I P + T L AC L++ G++IH I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+D D V +L + Y KCG + EA +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGL-------------------------------VAEASK 116
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F EMPER+++SWNA+++GY L +KEA+ M+K + T+ +L C + E
Sbjct: 117 VFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLE 176
Query: 392 IKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+++G+E+HG+ RN + + +V AL+ Y + + S R+ + + R+ VSWNA++
Sbjct: 177 LRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRV--FSLMLVRNIVSWNAII 234
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
TG+ G +A+ +S M E + T ++ ACA L G Q+H I+
Sbjct: 235 TGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLI 294
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
++ AL+ +Y+ LE + +F + D + NSMI + EA+ +F M
Sbjct: 295 NDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM 354
Query: 570 KKEGIKPDHITFHGILLAC--IHEGNV 594
+ E IK D T +L C +++G++
Sbjct: 355 RLERIKEDVRTIAIMLSLCNDLNDGSI 381
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN+++ +T+ L M D T+ L+L C L+ I G +H I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
D +++ V AL+D Y KCG + A F +M + RD VSWNA+++GY +EA+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPE-RDLVSWNALISGYVGCLCYKEAV 146
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYEINVVCRGALVEV 521
F EM+ P+ T LL AC + L G++IH + +RN ++++ ALV
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y + + + RVF +++ N++I GF + +AL+++ M EGIK D +T
Sbjct: 207 YMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ AC G ++L +Q + K+ +I L ++ +Y G ++ N +P
Sbjct: 266 LVVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVP 324
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 27/328 (8%)
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH--SGVSAN 142
E Y CG+ A +F P+RD SWN+++ +Y +N G+ L LF NH S + N
Sbjct: 508 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLF---NHMISELEPN 564
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA----YGKCMVMTDAR 198
+T N+L S + L + + LH +R ++ +++SL +A Y +C + A
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREV--SLEMDASLANAFITMYARCGKLQYAE 622
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++F +Q ++ VSWN ++ Y + G G++A + F +ML + +P N +FA+ L ACS
Sbjct: 623 KIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSG 682
Query: 259 SPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSI 316
G+Q+ H ++ G + ++ + G +A ++ P E + W ++
Sbjct: 683 LTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRAL 742
Query: 317 VSGYAISGRIREARELFNEMPE---RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+S I + +F ++ E N ++ + Y + LW E + +R+
Sbjct: 743 LSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERG-- 800
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGF 401
L G S I +G +VH F
Sbjct: 801 ---------LGKPPGTSWIVIGNQVHHF 819
>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
Length = 682
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 182/627 (29%), Positives = 300/627 (47%), Gaps = 50/627 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLES-NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ + LCA++ + + + + L + L N I YGKC NLD AR FD M
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 104 PERDGG----SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
+D G +WN++L A+T NG+ LF +M G+ + +T VL S + + +
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQ- 179
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K H ++ G G+ L +SLV Y +C + ++R +F I K+ +SWNV++
Sbjct: 180 --GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237
Query: 220 LVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G+ +EAV + ++ E P TF + + ACS L I ++ F+ D
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFD-D 296
Query: 279 DVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D++LG ++ M+ K G L+ AR D+ +N++SW ++SGYA + + R ELF +M
Sbjct: 297 DLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMD 356
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ V + + VT +L+ C+ + + G+E
Sbjct: 357 QEGVKA-------------------------------NSVTFVSLLDACSTIPALDFGRE 385
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR--IWFYQMSQRRDKVSWNAVLTGYAR 455
+H I + V+ AL++MY KC L+ A+ + YQ + RD V+WNA+ YA+
Sbjct: 386 LHLRITAAGLELHTVVATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQ 445
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS-LEQGKQIHCFVIRNCYEINVV 513
G EA+ F MQ + R + TF T+L AC + SS L G+ I I
Sbjct: 446 NGHPLEALELFWRMQQQGVRAQEATFVTILDACGDSSSLLAHGRSIAKLSSWTSDAI--- 502
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+GAL+ +Y+KC C++ A+ + SS ++ SM+ + H R EAL V G M+ +G
Sbjct: 503 -KGALLGMYSKCGCVDDALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDG 561
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
+ PD + F ++ AC H G + AL + YG YEC++ + R G ++E
Sbjct: 562 VVPDDVAFSAVVFACSHAGLLHEALVRLAWVSGDYGTAMGAGLYECVVDVLARMGRLQEA 621
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNG 660
E+ ++ MP+ P + C +G
Sbjct: 622 EELMHAMPYEPDSLAWMALLGACTVHG 648
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 256/511 (50%), Gaps = 43/511 (8%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+GKCG+++ AR +F + + SW +L A +NG L L M G + + +
Sbjct: 2 FGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+L A +L K H I+ G + +L ++L++ YGKC + AR FD ++
Sbjct: 62 VTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRME 121
Query: 206 N----KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ ++ V+WN ++ + G +EA +F +M E I+P + T L +C S
Sbjct: 122 HQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESC---SGDR 178
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+G H ++ + +GD+ ++ SL +MY +CGRLE++R + D+++IISW ++S A
Sbjct: 179 QGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEA 238
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
G EA EL E+ L G+ + D+VT
Sbjct: 239 RLGSSEEAVELLREID----------LEGF--------------------PEPDEVTFIS 268
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+++ C+ L ++ + + + + ++ + NA+++M+ K G L +AR F ++ +
Sbjct: 269 VVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPV-K 327
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
+ VSWN +++GYA+ Q + F +M E + + TF +LL AC+ I +L+ G+++H
Sbjct: 328 NVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELH 387
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK--ESSSL-DVIICNSMILGFCHNE 557
+ E++ V AL+ +Y KC L+ A + + +S+ L D + N++ + N
Sbjct: 388 LRITAAGLELHTVVATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNG 447
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLAC 588
EALE+F M+++G++ TF IL AC
Sbjct: 448 HPLEALELFWRMQQQGVRAQEATFVTILDAC 478
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 159/345 (46%), Gaps = 16/345 (4%)
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G I ARE+F+ + N+ SW +LA R+ EAL V M D V IL
Sbjct: 6 GDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCFVTIL 65
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDY-SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-- 440
++CA ++++ GK H +I SS+ + NAL++MY KC NL AR F +M +
Sbjct: 66 DLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQDH 125
Query: 441 -RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
RD V+WN++L + G EEA F EM+ E +PS T +L +C S QGK
Sbjct: 126 GRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESC---SGDRQGKL 182
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H V+ + + +LV++Y +C LE + VF+ D+I N MI
Sbjct: 183 FHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGS 242
Query: 559 GREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
EA+E+ + EG +PD +TF ++ AC G++ L + G L
Sbjct: 243 SEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFT-IQELVSSAGFDDDLLLG 301
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
++ ++ + G + +R+P V C +GYA
Sbjct: 302 NAVVNMFGKSGCLDAARATFDRLPVKNVVSW------NCLISGYA 340
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/608 (28%), Positives = 294/608 (48%), Gaps = 36/608 (5%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQIT 145
Y CG + AR LFD++ + WNA++ Y GF L +F M SG ++ T
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYT 186
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ V+++ + L V +HG + GF N+ +++SL+ Y C + AR++F+ +
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ VSWN ++ + G +EA+ +F M+ + P + T +AL +C L G++
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIK 306
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H ++ K + V +L +MY +CG ++
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGMD----------------------------- 337
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
EA +F E E++VI+W +M+ GY + K AL M+ + VTL +L+
Sbjct: 338 --EASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSA 395
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L +K GK +H ++ R S++ V AL+DMY KC + + F + S +R V
Sbjct: 396 CASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKR-TVP 454
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WNA+L+G + EA+ F M E + TF +++ A A ++ L+Q +H +++
Sbjct: 455 WNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLV 514
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGREA 562
R+ + + L+++Y+KC L+YA ++F E + D+I+ + +I G+ + G A
Sbjct: 515 RSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETA 574
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ +F M G++P+ ITF +L AC H G V L F M Y P HY C++
Sbjct: 575 VLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVD 634
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
L R G + E D + MPF + + C + LGE AA RL EL P +
Sbjct: 635 LLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGN 694
Query: 683 FKITTNRF 690
+ + N +
Sbjct: 695 YILLANIY 702
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 246/493 (49%), Gaps = 38/493 (7%)
Query: 154 AEELELGVSKQLHGLIVKRGFCGN---VILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
A L +K LHG + G + + L S L +Y C + AR++FDD+ + +
Sbjct: 90 AATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLF 149
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
WN I++ Y+ G +A+ +F M+ P +TF + ACS +S G+ IHG
Sbjct: 150 LWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGR 209
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ F + V SL MY+ CG++ GL A
Sbjct: 210 ALVSGFSSNMFVQNSLLAMYMNCGKV----GL---------------------------A 238
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R++FN M +R+V+SWN M++G+ ++ +EAL M + D T+ L C L
Sbjct: 239 RQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHL 298
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
E+++G +VH + +N I V NAL+DMY +CG + A + F + ++ +D ++W ++
Sbjct: 299 KELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAE-TKEKDVITWTSM 357
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ GY G ++ A+ MQ + P+ T +LL+ACA++ L+QGK +H +V+R
Sbjct: 358 INGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKL 417
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ +V+ AL+++Y KC + Y+ +VF ++S + N+++ G HNE REA+ +F
Sbjct: 418 DSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKS 477
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M E ++ +H TF+ ++ A ++K + S + G I ++ +I +Y + G
Sbjct: 478 MLIEEVEANHATFNSVIPAYAILADLKQVMN-LHSYLVRSGFISKIAVITGLIDMYSKCG 536
Query: 629 YMKELEDFVNRMP 641
+ + +P
Sbjct: 537 SLDYAHKIFDEIP 549
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 213/434 (49%), Gaps = 37/434 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N + Y CG + AR +F+ M +R SWN M+ + QNG P L +F M
Sbjct: 219 MFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMD 278
Query: 137 SGVSANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ V + T + L S +ELELG+ ++H L+ K + + ++LVD Y +C M
Sbjct: 279 ARVEPDSATIVSALPSCGHLKELELGI--KVHKLVQKNHLQEKIEVRNALVDMYSRCGGM 336
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
+A +F + + K+ ++W ++ Y++ GN K A+ + M + + P T A+ L AC
Sbjct: 337 DEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSAC 396
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L +G +H +++ + D +V+ +L +MY KC + + + + + + W
Sbjct: 397 ASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWN 456
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++SG + REA LF +S+L +E +
Sbjct: 457 ALLSGLIHNELAREAVGLF-------------------KSMLIEEV------------EA 485
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ T ++ A L+++K +H ++ R+ + S I V L+DMY KCG+L A F
Sbjct: 486 NHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIF 545
Query: 435 YQMSQR-RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
++ + +D + W+ ++ GY G E A+ F++M +P++ TF ++L AC++
Sbjct: 546 DEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGL 605
Query: 493 LEQGKQIHCFVIRN 506
++ G + ++I N
Sbjct: 606 VDDGLTLFKYMIEN 619
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 167/366 (45%), Gaps = 20/366 (5%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L CAS + + + L + ++ V ++ I+ Y KC + + +F +
Sbjct: 390 ASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSM 449
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+ WNA+L N + LF M V AN T+ +V+ + A +L L
Sbjct: 450 KRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNL 509
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN--KNAVSWNVIVRRYLVAG 223
H +V+ GF + + + L+D Y KC + A ++FD+I N K+ + W+V++ Y + G
Sbjct: 510 HSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHG 569
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV-- 281
+G+ AV++F +M+ ++P TF + L ACS +G+ + +I+ ++ +
Sbjct: 570 HGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIE-NYPSSPLPNH 628
Query: 282 LGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIR----EARELFNEM 336
+ ++ + GRL++A L+ P ++N W +++ I + A LF
Sbjct: 629 YTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELE 688
Query: 337 PER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL----ILNVCAGL- 389
PE N I + A R WK+A + + K+I+ L IL C L
Sbjct: 689 PESTGNYILLANIYAAVGR---WKDAENHKLQLSPPPKEINTFVTDLNMHPILTKCRALK 745
Query: 390 SEIKMG 395
SE+++
Sbjct: 746 SELELA 751
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/681 (27%), Positives = 314/681 (46%), Gaps = 76/681 (11%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG + +A +F EMPERD SWNA++ Y + LF++M +G++ N
Sbjct: 102 VDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNS 161
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFD 202
T +L + E LEL + +++HG ++ G F + + ++LV Y + + + R+F
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVL-SHRVFS 220
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR--------------------- 241
+ +N VSWN I+ +L G+ +A+ ++ ML E I+
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRL 280
Query: 242 -------PLNFTFANALFACSFL-------------------------------SSPYEG 263
+ F N LF + L S Y G
Sbjct: 281 GMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIG 340
Query: 264 MQIHG----VIIKIDFEGDDVVLGSLTEMYVKCGRLEDA----RGL----LDQPDERNII 311
H + IK+ E + ++ M C L D RGL + E +
Sbjct: 341 FGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAY 400
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+++S Y +I A+ +F +M +VISWN M++ + +S+ +A + +M ++
Sbjct: 401 LGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESE 460
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ T+ +L C S++ G+ +HGF +N N ++ +L +MY CG+ R+A
Sbjct: 461 IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAT 520
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANIS 491
F + QR D VSWN++++ Y + + +A+ F+ M E P+ T +L +C ++
Sbjct: 521 NMFTRCPQR-DLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLA 579
Query: 492 SLEQGKQIHCFVIRN--CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
L G+ +H + R E++ A + +Y +C L+YA ++F + ++ N+M
Sbjct: 580 HLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAM 639
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ + RGR+A F M +G KP++++F +L AC H G LQ F SM +G
Sbjct: 640 ITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFG 699
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I PQL HY CM+ L R G+ E F+N MP P + R + C+ L E
Sbjct: 700 IAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIF 759
Query: 670 RRLNELNPWAPFQFKITTNRF 690
+L EL P P F + +N +
Sbjct: 760 GKLVELEPSNPGNFILLSNIY 780
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 216/464 (46%), Gaps = 39/464 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ Q CA + +L + F +F+LN + Y G+L+ + LF+ +P D
Sbjct: 268 VIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSD 327
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV--SKQL 165
WN+M+ +Y GF + LF+ M + + T A ++ S +L G + L
Sbjct: 328 AALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIA-IMLSLCNDLNDGSIWGRGL 386
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +K G + L ++L+ Y K +T A+ +F+ ++ + +SWN ++ + +
Sbjct: 387 HAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFR 446
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+A +F M +I+ ++T + L C S G IHG IK E + + SL
Sbjct: 447 AKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSL 506
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
TEMY+ CG A + + +R+++SW S++S Y + +A LFN M
Sbjct: 507 TEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-------- 558
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+ + + VT+ IL C L+ + +G+ +H + R
Sbjct: 559 ------------------------SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 406 DYSSNIFVS--NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S + S NA + MY +CG L+ A F + Q R VSWNA++TGY G+ +A
Sbjct: 595 EVSLEMDASLANAFITMYARCGKLQYAEKIFCTL-QTRSIVSWNAMITGYGMHGRGRDAT 653
Query: 464 TSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+F++M + +P+ +F ++L+AC++ G Q+ ++R+
Sbjct: 654 LAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRD 697
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 226/482 (46%), Gaps = 38/482 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN+++ +T+ L + M G++ + T VL++ +G ++H I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+V + ++LVD Y KC ++ +A ++F ++ ++ VSWN ++ Y+ KEAV+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMY 289
+F +M + + P + T L AC + G +IHG ++ F+ D V +L Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
++ + R + RNI+SW +I++G+ G +A +L++ M
Sbjct: 208 MRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSM------------- 253
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
E + F D VT+ +++ CA +++G ++H + + +
Sbjct: 254 -------LIEGIKF-----------DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLIN 295
Query: 410 NIFVSNALLDMYRKCGNLRSARIW-FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++F+ NALL+MY G+L S+ W + D WN++++ Y G EA+ F +
Sbjct: 296 DLFILNALLNMYSDNGSLESS--WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIK 353
Query: 469 MQWE-TRPSKFTFETLLAACANISSLE-QGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ E + T +L+ C +++ G+ +H +++ E++ AL+ +Y K
Sbjct: 354 MRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHN 413
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
+ A VF++ LDVI N+MI F + +A E+F +M + IK + T +L
Sbjct: 414 QITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLA 473
Query: 587 AC 588
C
Sbjct: 474 FC 475
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 181/387 (46%), Gaps = 37/387 (9%)
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN I++ + N + + +M I P + T L AC L++ G++IH I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+D D V +L + Y KCG + EA +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGL-------------------------------VAEASK 116
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F EMPER+++SWNA+++GY L +KEA+ M+K + T+ +L C + E
Sbjct: 117 VFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLE 176
Query: 392 IKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+++G+E+HG+ RN + + +V AL+ Y + + S R+ + + R+ VSWNA++
Sbjct: 177 LRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHRV--FSLMLVRNIVSWNAII 234
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
TG+ G +A+ +S M E + T ++ ACA L G Q+H I+
Sbjct: 235 TGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLI 294
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
++ AL+ +Y+ LE + +F + D + NSMI + EA+ +F M
Sbjct: 295 NDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKM 354
Query: 570 KKEGIKPDHITFHGILLAC--IHEGNV 594
+ E IK D T +L C +++G++
Sbjct: 355 RLERIKEDVRTIAIMLSLCNDLNDGSI 381
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 5/300 (1%)
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN+++ +T+ L M D T+ L+L C L+ I G +H FI
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
D +++ V AL+D Y KCG + A F +M + RD VSWNA+++GY +EA+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPE-RDLVSWNALISGYVGCLCYKEAV 146
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYEINVVCRGALVEV 521
F EM+ P+ T LL AC + L G++IH + +RN ++++ ALV
Sbjct: 147 LLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGF 206
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y + + + RVF +++ N++I GF + +AL+++ M EGIK D +T
Sbjct: 207 YMRFDAV-LSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTM 265
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ AC G ++L +Q + K+ +I L ++ +Y G ++ N +P
Sbjct: 266 LVVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVP 324
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 23/326 (7%)
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH--SGVSAN 142
E Y CG+ A +F P+RD SWN+++ +Y +N G+ L LF NH S + N
Sbjct: 508 EMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLF---NHMISELEPN 564
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKR--GFCGNVILESSLVDAYGKCMVMTDARRM 200
+T N+L S + L + + LH +R + L ++ + Y +C + A ++
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +Q ++ VSWN ++ Y + G G++A + F +ML + +P N +FA+ L ACS
Sbjct: 625 FCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLT 684
Query: 261 YEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
G+Q+ H ++ G + ++ + G +A ++ P E + W +++S
Sbjct: 685 VTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLS 744
Query: 319 GYAISGRIREARELFNEMPE---RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
I + +F ++ E N ++ + Y + LW E + +R+
Sbjct: 745 SCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERG---- 800
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGF 401
L G S I +G +VH F
Sbjct: 801 -------LGKPPGTSWIVIGNQVHHF 819
>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
Length = 695
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 179/648 (27%), Positives = 304/648 (46%), Gaps = 46/648 (7%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC--GNLDDARGLFDEMPERDGGSW 111
S A+ E R+L + L+ L + + Y + G L A +FD M R+ +W
Sbjct: 53 SGPALTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAW 112
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLI- 169
NA++ G L+ + DM G V A++ TY VL++ A LGV +Q +
Sbjct: 113 NAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAA---LGVVEQGRKVQE 169
Query: 170 -----VKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+ RG NV ++ +LVD + KC + +AR +F+ ++ ++ +W ++ + G
Sbjct: 170 NVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGG 229
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ E + + +M E RP + A + AC + G +HG ++K D VL
Sbjct: 230 DWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLN 289
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KC RL+ A LF + ++VIS
Sbjct: 290 ALVDMYCKCARLD-------------------------------FAASLFWSIDHKDVIS 318
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W+ ++AG++++ + ++ M + + TL IL + L + GKE+H F
Sbjct: 319 WSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSL 378
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
RN + F+++AL+D Y + G+++ A I F + + + D V N+++ GY SE A+
Sbjct: 379 RNGLEHSEFLASALIDFYSRQGSIKEAEIVF-EFTPKNDLVVSNSMIGGYVVNEDSESAL 437
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ E RP + T ++L C S L QGK++H + IR+ AL ++Y
Sbjct: 438 RLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMY 497
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC CLE A +F + + + N++I + +A +F LMK++G+ PD +TF
Sbjct: 498 CKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFV 557
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L C HEG + L F+DSM Y I P EHY C++ LY R G + F+ +
Sbjct: 558 ALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANLQE 617
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + +L + CR++ + E A R+ E NP P + +N +
Sbjct: 618 VPEIDVLGCLLSACREHNRMDIAELVAERIFEQNPNDPGYHILLSNIY 665
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 53/109 (48%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ LC +++ ++L + + + + N + Y KCG L+ A +F M ER+
Sbjct: 458 VLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERN 517
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
++N ++ + ++G + LF M GVS +++T+ +L + E
Sbjct: 518 TVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHE 566
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 272/548 (49%), Gaps = 37/548 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T +++L ++ L LH ++K G +V + + +++ Y KC T AR++FD++
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
KN VSW+ ++ Y AG + A+ ++ +M + P + FA+ + AC+ LS+ G
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+IH +K +E V SL MY+KC + DA
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDAL------------------------- 156
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+F PE N +S+NA++ G+ + + L+F LMR+ D+ +L
Sbjct: 157 ------SVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLG 210
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+C +K G E+H + + S F+ N ++ MY + ++ A F ++ + +D +
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAF-RLIEEKDVI 269
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCF 502
SWN ++ + + + F M ET RP FTF + LAACA ++S+ GKQIH
Sbjct: 270 SWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAH 329
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++R ++ ALV +Y KC C+ YA +F + +++ N++I GF ++ G A
Sbjct: 330 LMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERA 389
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+E+F M GI+PD +TF G+L AC H G V +F+SM YGI P +EH+ C+I
Sbjct: 390 VELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLID 449
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
+ R G + E E+++ + PF +L + R +G +GE A+ L +L P
Sbjct: 450 MLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSP 509
Query: 683 FKITTNRF 690
+ + +N +
Sbjct: 510 YVLLSNLY 517
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 208/452 (46%), Gaps = 37/452 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L C+ +KA+ L + ++ VF+ N + Y KCG+ AR +FDEM E++
Sbjct: 9 LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW+AM+ Y Q G P ++L+ M + N+ +A+V+ + A + + +++H
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHS 125
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+K G+ + +SL+ Y KC +DA +F + N VS+N ++ + V E
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF-VENQQLE 184
Query: 228 AVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+ FFK++R+ + P F F L C+ + G ++H +K++ + + +
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVII 244
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY + +++A +E+++ISW ++++ + + +F M E
Sbjct: 245 TMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTE-------- 296
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+T D T L CAGL+ + GK++H + R
Sbjct: 297 ----------------------ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTR 334
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
++ V NAL++MY KCG + A F +M + VSWN ++ G+ G E A+ F
Sbjct: 335 LYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVH-HNLVSWNTIIAGFGNHGLGERAVELF 393
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+M RP TF LL AC + +++G+
Sbjct: 394 EQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 18/323 (5%)
Query: 30 ISGHLKSDEP-VSYSLYAHLFQL------------CASSKAIVEARKLESNLVTFYPTPP 76
ISG+ ++ EP ++ LY+ +F + CAS A+ +K+ S + F
Sbjct: 76 ISGYDQAGEPQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESI 135
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
F+ N I Y KC DA +F PE + S+NA++ + +N R LE F M
Sbjct: 136 SFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQ 195
Query: 137 SGVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ ++ + VL ++ E L+ G +LH VK + + ++ Y + ++
Sbjct: 196 QGLIPDRFAFMGVLGICTTTENLKRGA--ELHCQTVKLNLDSTPFIGNVIITMYSELNLI 253
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFA 253
+A + F I+ K+ +SWN ++ + + + +F M E ++RP +FTF +AL A
Sbjct: 254 QEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAA 313
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L+S G QIH +++ D V +L MY KCG + A + + N++SW
Sbjct: 314 CAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSW 373
Query: 314 TSIVSGYAISGRIREARELFNEM 336
+I++G+ G A ELF +M
Sbjct: 374 NTIIAGFGNHGLGERAVELFEQM 396
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 19/300 (6%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
+C +++ + +L V F+ N I Y + + +A F + E+D S
Sbjct: 211 ICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVIS 270
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
WN ++ A + + L +F M + V + T+ + L + A + KQ+H +
Sbjct: 271 WNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHL 330
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
++ ++ + ++LV+ Y KC + A +F + + N VSWN I+ + G G+ AV
Sbjct: 331 MRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAV 390
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVL 282
+F +M IRP + TF L AC+ +G + +G+ I+
Sbjct: 391 ELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEH------F 444
Query: 283 GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFNEMP 337
L +M + GRL +A + + P + + S++S + G + R A+ L P
Sbjct: 445 SCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQP 504
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 273/528 (51%), Gaps = 44/528 (8%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++ +HG IVK GF ++ + + LV+ Y KC VM A ++FD++ +N +W ++ Y+
Sbjct: 83 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ A+ +F KML P N+T L ACS L S G Q+H +IK + D +
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 202
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL+ Y K RLE +AI F + E++V
Sbjct: 203 GNSLSSFYSKFRRLE-----------------------FAIKA--------FKIIKEKDV 231
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
ISW ++++ + +L F M ++ TL +L+ C + + +G ++H
Sbjct: 232 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 291
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ Y S+I + N+++ +Y KCG L A+ F M + + V+WNA++ G+A+ E
Sbjct: 292 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGHAKMMDLAE 350
Query: 462 -----------AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
A+ F ++ + +P FTF ++L+ C+N+ +LEQG+QIH +I++
Sbjct: 351 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 410
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+VV ALV +Y KC ++ A + F E S +I SMI GF + ++AL++F M
Sbjct: 411 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 470
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ GIKP+ +TF G+L AC H G AL +F+ M+ +Y I P ++H+ C+I +Y R G
Sbjct: 471 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGR 530
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++E D V++M F P + + CR +G + LG +AA +L +L P
Sbjct: 531 VEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKP 578
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 274/563 (48%), Gaps = 35/563 (6%)
Query: 34 LKSDEP-----VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
+ ++EP + S Y L Q C EAR + ++V +F++ + Y
Sbjct: 51 VDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYS 110
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG ++ A +FD +P R+ +W +L Y QN P L+LF+ M +G + T
Sbjct: 111 KCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGI 170
Query: 149 VLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
VL SS + +E G KQ+H ++K + + +SL Y K + A + F I+
Sbjct: 171 VLNACSSLQSIEFG--KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE 228
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ +SW ++ G ++ F ML + ++P +T + L AC + + G QI
Sbjct: 229 KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI 288
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H + IK+ + ++ S+ +Y+KCG L +A+ L + + N+++W ++++G+A
Sbjct: 289 HSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHA----- 343
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
++ E +V A +G T ++++ L R K D T +L+VC
Sbjct: 344 -----KMMDLAEDDV---AAHKSGSTALAMFQK------LYRSGMKP-DLFTFSSVLSVC 388
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ L ++ G+++HG I ++ +++ V AL+ MY KCG++ A F +M R +SW
Sbjct: 389 SNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT-MISW 447
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+++TG+AR G S++A+ F +M+ +P++ TF +L+AC++ + L + +++
Sbjct: 448 TSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH-AGLADEALYYFELMQ 506
Query: 506 NCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
Y I V L+++Y + +E A V + + SM++ C + G+ L
Sbjct: 507 KQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRS-HGKSDL 565
Query: 564 EVFGLMKKEGIKPDHITFHGILL 586
+ + +KP + + LL
Sbjct: 566 GFYAAEQLLKLKPKDVETYVSLL 588
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 468 EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
E + TR + LL C + + + + IH +++ + ++ LV VY+KC
Sbjct: 55 EPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGV 114
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+E A +VF +V +++ G+ N AL++F M + G P + T +L A
Sbjct: 115 MESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNA 174
Query: 588 C 588
C
Sbjct: 175 C 175
>gi|255549567|ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544990|gb|EEF46504.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 655
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 279/520 (53%), Gaps = 24/520 (4%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WNA++ + G +L LF M S + T+ V ++ E +H ++
Sbjct: 107 WNALIRRAVRLGLLQHSLSLFRTMRRLNWSPDHYTFPFVFKACGELPSFLHGSCIHAIVC 166
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI---QNKNAVSWNVIVRRYLVAGNGKE 227
GF NV + +++V YG+C + AR+MFD++ + + VSWN ++ YL +G+ K
Sbjct: 167 STGFDSNVFVCNAVVAMYGRCGASSYARQMFDELLMGEVFDLVSWNSMIAVYLQSGDLKS 226
Query: 228 AVVMFFKMLRE---DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ +F +M + DI P + N L AC+ + G Q+HG I+ D V S
Sbjct: 227 GIELFRRMWKVGEFDIVPDAVSLVNVLPACASMGDWLCGKQVHGFAIRYGLFEDVFVANS 286
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----N 340
L +MY KCG + A + D+ ++++SW ++V+GY+ G+ +A LF +M E +
Sbjct: 287 LVDMYAKCGLMCIANKVFDRMQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMREEKIQLD 346
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V+SW+A++AGY + L EAL+ M+ ++VTL +L+ CA + + GKE H
Sbjct: 347 VVSWSAVIAGYAQRGLGYEALNVFRQMQVCGLRPNEVTLVSLLSGCASVGALLHGKETHC 406
Query: 401 F-------IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTG 452
+ R+D + V NA++DMY KC ++ R F + + R+ V+W A++ G
Sbjct: 407 YSIKCVLNFDRSDPRDELLVVNAIIDMYTKCKDINVGRAIFNSIPPKDRNVVTWTAMIGG 466
Query: 453 YARRGQSEEAMTSFSEMQWE----TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
YA+ G++ +A+ FS+M + +P+ FT L ACA +++L G+QIH FV+R+ Y
Sbjct: 467 YAQHGEANDALELFSQMLKQYNRSVKPNAFTISCALMACARLAALRFGRQIHAFVLRDQY 526
Query: 509 EINVV-CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +V+ L+++Y+K ++ A VF + + S++ G+ + G EA++VF
Sbjct: 527 DCDVLYVANCLIDMYSKSGDMDAARLVFDNMKHRNTVSWTSLMTGYGMHGHGEEAIKVFD 586
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
M++EG+ D ITF +L AC H G V +++F M CK
Sbjct: 587 EMRREGLVSDGITFLVVLYACSHSGMVDEGIKYFHDM-CK 625
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 245/511 (47%), Gaps = 82/511 (16%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
P Y+ + +F+ C + + + + + + VF+ N + YG+CG AR
Sbjct: 136 SPDHYT-FPFVFKACGELPSFLHGSCIHAIVCSTGFDSNVFVCNAVVAMYGRCGASSYAR 194
Query: 98 GLFDEM---PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG---VSANQITYANVLR 151
+FDE+ D SWN+M+ Y Q+G +ELF M G + + ++ NVL
Sbjct: 195 QMFDELLMGEVFDLVSWNSMIAVYLQSGDLKSGIELFRRMWKVGEFDIVPDAVSLVNVLP 254
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ A + KQ+HG ++ G +V + +SLVD Y KC +M A ++FD +Q+K+ VS
Sbjct: 255 ACASMGDWLCGKQVHGFAIRYGLFEDVFVANSLVDMYAKCGLMCIANKVFDRMQHKDVVS 314
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDI------------------------------- 240
WN +V Y G ++A+ +F KM E I
Sbjct: 315 WNAMVTGYSQIGKFEDALGLFEKMREEKIQLDVVSWSAVIAGYAQRGLGYEALNVFRQMQ 374
Query: 241 ----RPLNFTFANALFACSFLSSPYEGMQIHGVIIK--IDFEGDD-----VVLGSLTEMY 289
RP T + L C+ + + G + H IK ++F+ D +V+ ++ +MY
Sbjct: 375 VCGLRPNEVTLVSLLSGCASVGALLHGKETHCYSIKCVLNFDRSDPRDELLVVNAIIDMY 434
Query: 290 VKCGRLEDARGLLDQ--PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
KC + R + + P +RN+++WT+++ GYA G +A ELF++ M
Sbjct: 435 TKCKDINVGRAIFNSIPPKDRNVVTWTAMIGGYAQHGEANDALELFSQ-----------M 483
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
L Y RS+ + T+ L CA L+ ++ G+++H F+ R+ Y
Sbjct: 484 LKQYNRSV-----------------KPNAFTISCALMACARLAALRFGRQIHAFVLRDQY 526
Query: 408 SSNI-FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
++ +V+N L+DMY K G++ +AR+ F M + R+ VSW +++TGY G EEA+ F
Sbjct: 527 DCDVLYVANCLIDMYSKSGDMDAARLVFDNM-KHRNTVSWTSLMTGYGMHGHGEEAIKVF 585
Query: 467 SEMQWETRPSK-FTFETLLAACANISSLEQG 496
EM+ E S TF +L AC++ +++G
Sbjct: 586 DEMRREGLVSDGITFLVVLYACSHSGMVDEG 616
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 48 LFQLCASSKAIVEARKLES-------NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
L CAS A++ ++ N P + ++N I+ Y KC +++ R +F
Sbjct: 388 LLSGCASVGALLHGKETHCYSIKCVLNFDRSDPRDELLVVNAIIDMYTKCKDINVGRAIF 447
Query: 101 DEMPERDGG--SWNAMLGAYTQNGFPGRTLELF---LDMNHSGVSANQITYANVLRSSAE 155
+ +P +D +W AM+G Y Q+G LELF L + V N T + L + A
Sbjct: 448 NSIPPKDRNVVTWTAMIGGYAQHGEANDALELFSQMLKQYNRSVKPNAFTISCALMACAR 507
Query: 156 ELELGVSKQLHGLIVKRGF-CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L +Q+H +++ + C + + + L+D Y K M AR +FD+++++N VSW
Sbjct: 508 LAALRFGRQIHAFVLRDQYDCDVLYVANCLIDMYSKSGDMDAARLVFDNMKHRNTVSWTS 567
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ Y + G+G+EA+ +F +M RE + TF L+ACS EG++
Sbjct: 568 LMTGYGMHGHGEEAIKVFDEMRREGLVSDGITFLVVLYACSHSGMVDEGIK 618
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 176/621 (28%), Positives = 291/621 (46%), Gaps = 54/621 (8%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P +F LN + Y G+L A+ LF P R+ +W M+ A+ G L LF
Sbjct: 284 PHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 343
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M GV +++T VL L LH +K G +V + ++L+DAY K
Sbjct: 344 AMLGEGVIPDRVTVTTVL-----NLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHG 398
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ ARR+F ++ +K+AV++N ++ G +A+ +F M R + L
Sbjct: 399 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYS------RHPLH 452
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ S + V + SL + Y KC L+D R
Sbjct: 453 LLQYSHSRSRSTSVLNVFVN----------NSLLDFYSKCDCLDDMR------------- 489
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
LF+EMPER+ +S+N ++A Y + L M+K
Sbjct: 490 ------------------RLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 531
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D + +L+V L ++ +GK++H + +S + NAL+DMY KCG L +A+
Sbjct: 532 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 591
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F S++ +SW A++TGY + GQ EEA+ FS+M+ RP + TF +++ A ++++
Sbjct: 592 NFSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 650
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+ G+Q+H ++IR+ Y+ +V LV++Y KC CL+ A+R F E + I N++I
Sbjct: 651 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 710
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ H + A+++F M G PD +TF +L AC H G +++F M+ +Y I
Sbjct: 711 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 770
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY C+I R G +++ + MPF + I CR +G L AA +
Sbjct: 771 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 830
Query: 672 LNELNPWAPFQFKITTNRFDR 692
L + P + I +N + R
Sbjct: 831 LFGMEPTDATPYVILSNIYAR 851
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 193/396 (48%), Gaps = 16/396 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N ++ Y KC LDD R LFDEMPERD S+N ++ AY N L LF +M
Sbjct: 469 VFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQK 528
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G + YA +L + ++ + KQ+H +V G +L ++L+D Y KC ++
Sbjct: 529 LGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 588
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+ F + K+A+SW ++ Y+ G +EA+ +F M R +RP TF++ + A S
Sbjct: 589 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSS 648
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L+ G Q+H +I+ ++ L +MY KCG L++A D+ ERN ISW ++
Sbjct: 649 LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAV 708
Query: 317 VSGYAISGRIREARELFNEMPE----RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+S YA G + A ++F M + +++ ++LA + + L E + + LM+
Sbjct: 709 ISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH--- 765
Query: 373 DIDQVTLGLILN----VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
Q ++ V L + +V + + ++ + ++L R GN
Sbjct: 766 ---QYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQE 822
Query: 429 SARIWFYQM--SQRRDKVSWNAVLTGYARRGQSEEA 462
AR+ ++ + D + + YAR GQ E+A
Sbjct: 823 LARVAADKLFGMEPTDATPYVILSNIYARAGQWEDA 858
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 13/333 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA + + S + +++ + LV L N I+ Y KCG LD A+ F
Sbjct: 538 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 597
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E+ SW A++ Y QNG L+LF DM +G+ ++ T+++++++S+ +G+ +Q
Sbjct: 598 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 657
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH +++ G+ +V S LVD Y KC + +A R FD++ +N++SWN ++ Y G
Sbjct: 658 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 717
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-----HGVIIKIDFEGDD 279
K A+ MF ML P + TF + L ACS E M+ H I E
Sbjct: 718 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYA 777
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR----ELFNE 335
V+ +L V C + + L++ P + + I WTSI+ I G AR +LF
Sbjct: 778 CVIDTLGR--VGCFS-QVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 834
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
P + + + Y R+ W++A +MR
Sbjct: 835 EPT-DATPYVILSNIYARAGQWEDAACVKKIMR 866
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
+ G L AR + DQ +NI S I+S Y+ SG + A+ LF P RN +W M+
Sbjct: 268 LSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMR 327
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV--CAGLSEIKMGKEVHGFIHRNDY 407
+ + +AL M D+VT+ +LN+ C S +H F +
Sbjct: 328 AHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGL 380
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++FV N LLD Y K G L +AR F +M +D V++NA++ G ++ G +A+ F+
Sbjct: 381 DTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQLFA 439
Query: 468 EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
M R + ++ L ++ + R+ +NV +L++ Y+KC C
Sbjct: 440 AM----RRAGYSRHPL-----HLLQYSHSRS------RSTSVLNVFVNNSLLDFYSKCDC 484
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L+ R+F E D + N +I + N+ L +F M+K G
Sbjct: 485 LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLG 530
>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 178/661 (26%), Positives = 299/661 (45%), Gaps = 58/661 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C +A R L ++++ VF N + Y L DAR LFDE ER+ +W
Sbjct: 13 CGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATW 72
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
M+ AY+ +G P L+ ++ M S + N Y+ VL++ +L K +HG +
Sbjct: 73 TTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVF 132
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ + +L ++L+D Y KC ++ AR++FDDI ++ SWN ++ Y G +EAV
Sbjct: 133 RANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVN 192
Query: 231 MFFKMLREDIRPLN------------------------------FTFANALFACSFLSSP 260
+F++M D N FTF+ AL C
Sbjct: 193 LFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLL 252
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
QIH + K F +L + Y C L++A + D+
Sbjct: 253 VMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYS-------------- 298
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
S I + L WN+ML+GY + A++ V + +D T G
Sbjct: 299 CCSASILDCLPL-----------WNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFG 347
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
L VC L ++G +V G + Y + V + L+D+Y G ++ A FY++ ++
Sbjct: 348 SALKVCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEK 407
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
D V W+++++ + G + + F +M + +F ++L AC+++ L GKQ+
Sbjct: 408 -DIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQV 466
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H F +++ YE + +L+++Y KC +E + +F +S D + +I+G N R
Sbjct: 467 HSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRA 526
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EA+ F M + G+KP+ ITF G+L AC H G V+ A F M+ +Y + P +EHY C
Sbjct: 527 MEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYC 586
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
+++L + G KE E+ + MPF P + + C + L + A RL P
Sbjct: 587 IVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAERLLTTLPED 646
Query: 680 P 680
P
Sbjct: 647 P 647
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 275/519 (52%), Gaps = 37/519 (7%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+I + L+D Y KC A ++FD + +N VSW+ ++ +++ G+ K ++ +F +M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
R+ I P FTF+ L AC L++ +G+QIHG +KI FE V SL +MY KCGR
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR-- 528
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
I EA ++F + +R++ISWNAM+AG+ +
Sbjct: 529 -----------------------------INEAEKVFRRIVDRSLISWNAMIAGFVHAGY 559
Query: 357 WKEALDFVFLMRKTT--KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIF 412
+ALD +M++ + D+ TL +L C+ I GK++HGF+ R+ + S+
Sbjct: 560 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 619
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-W 471
++ +L+D+Y KCG L SAR F Q+ ++ +SW++++ GYA+ G+ EAM F +Q
Sbjct: 620 ITGSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLILGYAQEGEFVEAMGLFKRLQEL 678
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
++ F +++ A+ + L QGKQ+ ++ + ++V++Y KC ++ A
Sbjct: 679 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 738
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ F E DVI +I G+ + G++++ +F M + I+PD + + +L AC H
Sbjct: 739 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 798
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G +K + F + +GI P++EHY C++ L R G +KE + ++ MP P V + +
Sbjct: 799 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 858
Query: 652 IFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR +G LG+ + L ++ P + + +N +
Sbjct: 859 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 897
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 215/426 (50%), Gaps = 41/426 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KC A +FD MPER+ SW+A++ + NG +L LF +M G+
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N+ T++ L++ LE G+ Q+HG +K GF V + +SLVD Y KC + +A
Sbjct: 476 PNEFTFSTNLKACGLLNALEKGL--QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 533
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI--RPLNFTFANALFACSF 256
++F I +++ +SWN ++ ++ AG G +A+ F M +I RP FT + L ACS
Sbjct: 534 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 593
Query: 257 LSSPYEGMQIHGVIIKIDFE--GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
Y G QIHG +++ F + GSL ++YVKCG L AR DQ E+ +ISW+
Sbjct: 594 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 653
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ GYA G EA LF + E N I
Sbjct: 654 SLILGYAQEGEFVEAMGLFKRLQELN-------------------------------SQI 682
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L I+ V A + ++ GK++ + V N+++DMY KCG + A F
Sbjct: 683 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 742
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M Q +D +SW V+TGY + G ++++ F EM + P + + +L+AC++ +
Sbjct: 743 AEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 801
Query: 494 EQGKQI 499
++G+++
Sbjct: 802 KEGEEL 807
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+LN ++ Y KCG +D+A F EM +D SW ++ Y ++G +++ +F +M
Sbjct: 721 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 780
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHG-LIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ +++ Y VL + + + ++L L+ G V + +VD G+ + +A
Sbjct: 781 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 840
Query: 198 RRMFDDIQNKNAVS-WNVIVRRYLVAGN---GKEAVVMFFKMLREDIR-PLNFTFANALF 252
+ + D + K V W ++ V G+ GKE + +LR D + P N+ + L+
Sbjct: 841 KHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI---LLRIDAKNPANYVMMSNLY 897
Query: 253 A 253
Sbjct: 898 G 898
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+N++ L+++Y KC A +VF +V+ ++++ G N + +L +F M
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
++GI P+ TF L AC ++ LQ K G +E ++ +Y + G
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGR 528
Query: 630 MKELEDFVNRM 640
+ E E R+
Sbjct: 529 INEAEKVFRRI 539
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 280/547 (51%), Gaps = 35/547 (6%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A +LR+ ++ Q+H V GF ++I+ + L+D YGKC + A +FD +
Sbjct: 8 AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+N VSW ++ YL GN K ++ + +M ++P FTF+ +L AC L GMQI
Sbjct: 68 RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQI 127
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG+ +K FE VV + +MY KCGR I
Sbjct: 128 HGMCVKSGFEWVSVVGNATIDMYSKCGR-------------------------------I 156
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
A ++FN+MP RN++SWNAM+AG+T +++L M+ + D+ T L C
Sbjct: 157 GMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKAC 216
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNI--FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
L I+ G ++H + + +I +++A++D+Y KCG L A+ F ++ Q+ + +
Sbjct: 217 GALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK-NLI 275
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SW+A++ G+A+ G EAM F +++ + F ++ A+++ +EQGKQ+HC++
Sbjct: 276 SWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYI 335
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ +++ +++++Y KC E A R+F E +V+ MI G+ + G +A+
Sbjct: 336 LKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAI 395
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F M+ +GI+ D + + +L AC H G ++ + ++F + + + P +EHY CM+ +
Sbjct: 396 HLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDI 455
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G +KE ++ + M P + + + CR +G +G L ++ P +
Sbjct: 456 LGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNY 515
Query: 684 KITTNRF 690
+ +N +
Sbjct: 516 VMMSNIY 522
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/600 (26%), Positives = 291/600 (48%), Gaps = 86/600 (14%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L + C+ + + ++ + V + + N I+ YGKC +D A +FD M E
Sbjct: 8 AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLE 67
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK-- 163
R+ SW A++ Y Q G +L L +M +SGV N+ T++ L++ LGV +
Sbjct: 68 RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACG---ALGVVENG 124
Query: 164 -QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q+HG+ VK GF ++ ++ +D Y KC + A ++F+ + +N VSWN ++ +
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD--DV 280
GNG++++V+F +M + P FTF + L AC L + G QIH +I F ++
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ ++ ++Y KCG L +A+ + D+ +++N+ISW++++ G+A G + EA +LF +
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQ----- 299
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+R++ ++D L +++ V A L+ ++ GK++H
Sbjct: 300 --------------------------LRESVSNVDGFVLSIMMGVFADLALVEQGKQMHC 333
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+I + +I V+N+++DMY KCG A F +M Q R+ VSW ++TGY + G E
Sbjct: 334 YILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEM-QVRNVVSWTVMITGYGKHGLGE 392
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A+ F+ MQ + + + LL+AC+ H +IR E
Sbjct: 393 KAIHLFNRMQLDGIELDEVAYLALLSACS-----------HSGLIRESQE---------- 431
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
Y C + ++ +++ C ILG R + E L++ +KP+
Sbjct: 432 --YFSRLCNNHQMK-----PNIEHYACMVDILG-----RAGQLKEAKNLIENMKLKPNEG 479
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE-----HYECMIKLYCRYGYMKELE 634
+ +L AC GN+++ + + I+ +++ +Y M +Y GY KE E
Sbjct: 480 IWQTLLSACRVHGNLEIGREVGE-------ILFRMDTDNPVNYVMMSNIYAEAGYWKECE 532
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 135/264 (51%), Gaps = 3/264 (1%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L +L C+ G +VH + ++ ++N L+DMY KC + A F +M
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+R + VSW A++ GY + G ++ ++ EM + +P++FTF T L AC + +E G
Sbjct: 67 ER-NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGM 125
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
QIH +++ +E V A +++Y+KC + A +VF + +++ N+MI G H
Sbjct: 126 QIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEG 185
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK-YGIIPQLEH 616
GR++L +F M+ +G PD TF L AC G ++ Q S+ + + I +
Sbjct: 186 NGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNII 245
Query: 617 YECMIKLYCRYGYMKELEDFVNRM 640
++ LY + GY+ E + +R+
Sbjct: 246 ASAIVDLYAKCGYLFEAQKVFDRI 269
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 177/376 (47%), Gaps = 32/376 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLNRAI-ECYGKCGNLDDARGLFDE 102
+ + C + AI ++ ++L+T +P ++ AI + Y KCG L +A+ +FD
Sbjct: 209 FTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDR 268
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +++ SW+A++ + Q G ++LF + S + + + ++ A+ +
Sbjct: 269 IEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQG 328
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+H I+K ++ + +S++D Y KC + +A R+F ++Q +N VSW V++ Y
Sbjct: 329 KQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKH 388
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-----IKIDFEG 277
G G++A+ +F +M + I + L ACS E + + +K + E
Sbjct: 389 GLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEH 448
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNIISWTSIVSGYAISGRI---REAR 330
+ ++ + G+L++A+ L++ +P+E W +++S + G + RE
Sbjct: 449 ----YACMVDILGRAGQLKEAKNLIENMKLKPNEG---IWQTLLSACRVHGNLEIGREVG 501
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
E+ M N +++ M Y + WKE +RK K L AG S
Sbjct: 502 EILFRMDTDNPVNYVMMSNIYAEAGYWKECER----VRKLVKAKG-------LKKEAGQS 550
Query: 391 EIKMGKEVHGFIHRND 406
+++ KE+H F +D
Sbjct: 551 WVEINKEIHFFYGGDD 566
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 170/558 (30%), Positives = 285/558 (51%), Gaps = 41/558 (7%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ELG ++ H +VK G + + +SL+D Y KC + A R++D + + +A + N ++
Sbjct: 129 VELG--RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLI 186
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G +A +F ++ RP ++T++ L C +S+ EG Q+H ++K+ +
Sbjct: 187 SAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYL 246
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ V +L +Y KCG +E+A + + +RNIISWT+ ++G+ G ++A + F+ M
Sbjct: 247 SETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMM 306
Query: 337 PER----NVISWNAMLAG-----------YTRSLLWK-EALDFVFLMRK--------TTK 372
E N +++ +LA T S W + L +FL+RK T+
Sbjct: 307 RESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSL 366
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+Q L IL C LS+ + G+ +H I +N + S+ ++ +AL+ MY KCG++ A
Sbjct: 367 RPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACR 426
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
F + + VSWN ++ G+++ + PS T +LL AC N+++
Sbjct: 427 VFDWIP---NVVSWNTLIAGFSQM------------LDQGFCPSSVTISSLLPACTNVAN 471
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L GK+IH + + E +V R ALV++Y KC + A +F + + NS+I G
Sbjct: 472 LRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFG 531
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ ++ EA+E+F M++ K DH+TF +L AC H G V+L F M+ KY I P
Sbjct: 532 YANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEP 591
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY CM+ L R G + E D + MP P + + CR +G L E AA L
Sbjct: 592 RLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHL 651
Query: 673 NELNPWAPFQFKITTNRF 690
EL P +P + +N +
Sbjct: 652 FELEPESPGSSLLLSNLY 669
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 258/548 (47%), Gaps = 80/548 (14%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y KCG +D A ++D+M D + N ++ AY +NGF + ++F+ + +
Sbjct: 149 FVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNM 208
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G N TY+ +L + KQLH +VK + + ++L+ Y KC +M +A
Sbjct: 209 GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS-- 255
+F+++ +N +SW + + G+ K+A+ F M I P FTF+ L +C
Sbjct: 269 EIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCD 328
Query: 256 --------FLSSPYEGMQIHGVII--KIDFEG--------DDVVLGSLTEMYVKCGRLED 297
S+ + G + + + K+ EG + VL S+ + CG L D
Sbjct: 329 LGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILK---ACGHLSD 385
Query: 298 ARG-------LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
R +L E + ++++ Y+ G + +A +F+ +P NV+SWN ++AG
Sbjct: 386 RRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIP--NVVSWNTLIAG 443
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
++ + LD F VT+ +L C ++ ++ GKE+HG+ +
Sbjct: 444 FS------QMLDQGFC-------PSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKD 490
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM- 469
++V +AL+DMY KCG + A+I FY M + R+ V+WN+++ GYA G EA+ F++M
Sbjct: 491 VYVRSALVDMYAKCGYISEAKILFYMMPE-RNTVTWNSLIFGYANHGYCNEAIELFNQME 549
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ +T+ TF +L AC++ +E G+ + R E +
Sbjct: 550 ESDTKLDHLTFTAVLNACSHAGMVELGESL----FRKMQE-------------------K 586
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
Y I L+ C +LG R + E + L+K ++PD + +L AC
Sbjct: 587 YRIE-----PRLEHYACMVDLLG-----RAGKLSEAYDLIKAMPVEPDKFVWGALLGACR 636
Query: 590 HEGNVKLA 597
+ GN++LA
Sbjct: 637 NHGNIELA 644
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 206/506 (40%), Gaps = 106/506 (20%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y+ + +C + AI E ++L +++V + N + Y KCG +++A
Sbjct: 212 PNHYT-YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEI 270
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F+ + +R+ SW A + + Q+G + L+ F M SG+ N+ T++ VL S +L
Sbjct: 271 VFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLG 330
Query: 159 LGV----------SKQLHGLIVKRGF-----------------------CGN-------- 177
+ + L + + R CG+
Sbjct: 331 KWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGE 390
Query: 178 ----VILESSL-VDAY---------GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
VIL++S DAY KC + A R+FD I N VSWN L+AG
Sbjct: 391 NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI--PNVVSWNT-----LIAG 443
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
F +ML + P + T ++ L AC+ +++ G +IHG + I E D V
Sbjct: 444 --------FSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRS 495
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG + +A+ L ERN ++W S++ GYA G EA ELFN+M E +
Sbjct: 496 ALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT-- 553
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV-HGFI 402
+D +T +LN C+ +++G+ +
Sbjct: 554 -----------------------------KLDHLTFTAVLNACSHAGMVELGESLFRKMQ 584
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---S 459
+ + ++D+ + G L A M DK W A+L G +
Sbjct: 585 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 644
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLA 485
E A E++ E+ S L A
Sbjct: 645 EVAAEHLFELEPESPGSSLLLSNLYA 670
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 2/207 (0%)
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C +++G+ H F+ + S+ FV +L+DMY KCG + SA + Y D
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA-VRVYDKMTSLD 178
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
+ N +++ YAR G +A F ++ TRP+ +T+ T+LA C IS++++GKQ+H
Sbjct: 179 AATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHA 238
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
V++ Y AL+ +Y+KC +E A VF+ ++I + I GF + ++
Sbjct: 239 HVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKK 298
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLAC 588
AL+ F +M++ GI+P+ TF +L +C
Sbjct: 299 ALKQFSMMRESGIEPNEFTFSIVLASC 325
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 267/519 (51%), Gaps = 40/519 (7%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
NV + +SL++ Y K +++DARR+FD + +N+ SW+ +V Y +EA +F ML
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 237 RE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---IDFEGDDVVLGSLTEMYVKC 292
E F L A S G Q+HG+I+K +DF V SL MY K
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVS---VENSLVTMYAKA 162
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G + A + + ERN I+W+++++GYA +G A +F++M AG+T
Sbjct: 163 GCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHA----------AGFT 212
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ +F F+ +LN + L + +GK+ HG + + + I+
Sbjct: 213 PT-------EFTFVG--------------VLNASSDLGALAVGKQAHGLMVKLGFEVQIY 251
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
V +AL+DMY KCG + A+ F Q+ + D V W A+++G+ + G+ EEA+T ++ M E
Sbjct: 252 VKSALVDMYAKCGCIADAKEGFDQLYE-VDIVLWTAMVSGHVQNGEHEEALTLYARMDKE 310
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
PSK T + L ACA I++LE GKQ+H +++ + AL +Y+KC LE
Sbjct: 311 GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDG 370
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ VF+ DVI NS+I GF N G AL++F MK EG PD+ITF IL AC H
Sbjct: 371 MSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHM 430
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G V ++F M YG+ P+L+HY CM+ + R G +KE +DF+ + + + R
Sbjct: 431 GLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRI 490
Query: 652 IFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR +G +A RL EL + + +N +
Sbjct: 491 VLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIY 529
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 239/487 (49%), Gaps = 39/487 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-LDMN 135
V++ + Y K G + DAR +FD MP+R+ SW+ M+ Y +LF L +
Sbjct: 47 VYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLE 106
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
++ VL + + L L + +Q+HGLIVK G V +E+SLV Y K M
Sbjct: 107 ECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMG 166
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A +F+ + +N+++W+ ++ Y G AV MF +M P FTF L A S
Sbjct: 167 AAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASS 226
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L + G Q HG+++K+ FE V +L +MY KCG + DA+ DQ E +I+ WT+
Sbjct: 227 DLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTA 286
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+VSG+ +G EA L+ M + +I + +A R+
Sbjct: 287 MVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRA--------------------- 325
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
CAG++ ++ GK++H I + V +AL MY KCGNL F
Sbjct: 326 ----------CAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 375
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
++ RD ++WN++++G+++ G A+ F EM+ E T P TF +L AC+++ ++
Sbjct: 376 RIPD-RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 434
Query: 495 QGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN-SMIL 551
+G + + ++ Y + + +V++ ++ L+ A + F ES ++D C ++L
Sbjct: 435 RGWEYFSLMTKD-YGLTPRLDHYACMVDILSRAGMLKEA-KDFIESITIDHGTCLWRIVL 492
Query: 552 GFCHNER 558
G C + R
Sbjct: 493 GACRSLR 499
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 4/234 (1%)
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
SN++V +LL+MY K G + AR F M QR + SW+ ++ GYA SEEA F
Sbjct: 45 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQR-NSFSWSTMVAGYAAEKCSEEAFDLFRL 103
Query: 469 MQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M E + S+F +L+A + L G+Q+H ++++ V +LV +Y K
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 163
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
C+ A VF+ S + I ++MI G+ N A+ +F M G P TF G+L
Sbjct: 164 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 223
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
A G + + Q M K G Q+ ++ +Y + G + + ++ +++
Sbjct: 224 ASSDLGALAVGKQAHGLM-VKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 276
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 177/651 (27%), Positives = 304/651 (46%), Gaps = 42/651 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLL---NRAIECYGKCGNLDDARGLFDEMP 104
L +L S + R L + L+T + L + + CY G+L AR +FD P
Sbjct: 32 LLRLLPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTP 91
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS---GVSANQITYANVLRSSAEELELGV 161
D S+ ML Q + L DM + + + L++ + G
Sbjct: 92 RPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGY 151
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+LH VK G ++ +SLVD Y K + AR++F+ I +N VSW ++ +
Sbjct: 152 GTRLHCDAVKVGGADGFVM-NSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQ 210
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G + +++F KM ++++ P +T A + ACS L ++G +HG +IK + +
Sbjct: 211 NGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFI 270
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MYVKCG LEDA+ + F+E+ ++
Sbjct: 271 SAALLDMYVKCGELEDAQCV-------------------------------FDELSYIDL 299
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHG 400
+ W M+ GYT++ +AL FL +K + + VT+ +L+ A L ++ +G+ +HG
Sbjct: 300 VLWTTMIVGYTQNGNPLDALRL-FLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHG 358
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ V NAL+DMY KC + A F +S + D V+WN++L+GYA
Sbjct: 359 IAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNK-DVVAWNSMLSGYAENNMCN 417
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+A+ F +M + P + L+A + L GK H + +++ + N+ AL+
Sbjct: 418 DALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALL 477
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y KC L A RVF E + + + +MI G+ ++++FG M K+G+ P+ +
Sbjct: 478 NLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDV 537
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
F IL C H G V A ++FDSM + I P ++HY CM+ + R G ++E +F++
Sbjct: 538 AFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDN 597
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP + C + GE A +R+ L+P P + + +N +
Sbjct: 598 MPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLY 648
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 204/446 (45%), Gaps = 37/446 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y++ A + C++ + + R + +++ F+ ++ Y KCG L+DA+
Sbjct: 231 PSEYTI-ATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQC 289
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FDE+ D W M+ YTQNG P L LFLD + + N +T A VL +SA+ +
Sbjct: 290 VFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRD 349
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + + +HG+ VK G ++ ++LVD Y KC +++A R+F I NK+ V+WN ++
Sbjct: 350 LSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSG 409
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y +A+++F +M + P + +AL A L G HG +K F +
Sbjct: 410 YAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSN 469
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L +Y KCG L AR + D+ ++RN ++W +++ GY + G + +LF EM +
Sbjct: 470 IYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLK 529
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V + V IL+ C+ + K
Sbjct: 530 DGV-------------------------------HPNDVAFTSILSTCSHTGMVTAAKRY 558
Query: 399 HGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG---YA 454
+ ++ + + ++ ++D+ + GNL A + M + D W A L G ++
Sbjct: 559 FDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHS 618
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTF 480
R EEA+ + E RP +
Sbjct: 619 RLQFGEEAIKRMMVLHPE-RPDLYVL 643
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 275/608 (45%), Gaps = 77/608 (12%)
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN---KNAVSWNVIVR 217
++ QLH L V+ G + + +LVD + R+ + K+AV WN V
Sbjct: 70 LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
A EA+ +F +M + +T A L AC + EG +H +K+ +
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA 189
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM- 336
+V G L MY + + A +LD +++ W ++V+ A G + +A EL M
Sbjct: 190 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 249
Query: 337 ---PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
PE NV +WN +L+G +R +EAL V M K D T+ +L A ++
Sbjct: 250 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 309
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR------------ 441
G E+H F RN +++ AL+DMY KCG L A+ + R
Sbjct: 310 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYA 369
Query: 442 ----------------------DKVSWNAVLTGYARRGQSEEAM---------------- 463
D +WN ++TGY+ GQS +A+
Sbjct: 370 NAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVV 429
Query: 464 --TSF-----------------SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
TS EMQ + +PS T LL ACA ++ ++GK++HCF
Sbjct: 430 SWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFA 489
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+R Y+ ++V AL+++Y+K L A +F+ ++++CN+M+ G + +GREA+
Sbjct: 490 LRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAI 549
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
E+F M G+KPD ITF +L AC G V ++FDSM KYG+ P E+Y CM+ L
Sbjct: 550 ELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDL 609
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R GY+ E DF+ R P +P + C +G L E AAR L L P+ +
Sbjct: 610 LARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANY 669
Query: 684 KITTNRFD 691
+ N ++
Sbjct: 670 LLMMNLYE 677
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 187/422 (44%), Gaps = 70/422 (16%)
Query: 81 NRAIECYGKCGNLDDARGLFDEM----PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
N + C + G +DDA L M PE + +WN +L +++G L + M
Sbjct: 226 NAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK 285
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ + T +++L+S A L ++H ++ +V ++LVD Y KC +
Sbjct: 286 QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDC 345
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+++ D ++++N +WN +V Y AG A+ + M + + P + T N L
Sbjct: 346 AQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP-DITTWNGLITGYS 404
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
++ G V++ + V N++SWTS+
Sbjct: 405 MN----GQSSQAVLLLRQIKAAGVT--------------------------PNVVSWTSL 434
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG +G ++++ F M+K
Sbjct: 435 ISGSCHNGE-------------------------------YEDSFYFCHEMQKDGVQPSL 463
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT+ ++L CAGL+ K GKE+H F R Y ++ VS AL+DMY K G+L SA++ F
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 523
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLE 494
+ Q+++ V NA+LTG A GQ EA+ F +M W + +P TF LL AC ++ +
Sbjct: 524 I-QQKNLVLCNAMLTGLAVHGQGREAIELFHDM-WNSGLKPDSITFTALLTACRSMGLVT 581
Query: 495 QG 496
+G
Sbjct: 582 EG 583
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 149/375 (39%), Gaps = 77/375 (20%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPER---------------------------- 106
P V+ ++ Y KCG LD A+ + D + R
Sbjct: 325 PDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELM 384
Query: 107 -------DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
D +WN ++ Y+ NG + + L + +GV+ N +++ +++ S E
Sbjct: 385 KKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEY 444
Query: 160 -------------GV----------------------SKQLHGLIVKRGFCGNVILESSL 184
GV K+LH ++R + ++++ ++L
Sbjct: 445 EDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTAL 504
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+D Y K + A+ +F+ IQ KN V N ++ V G G+EA+ +F M ++P +
Sbjct: 505 IDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDS 564
Query: 245 FTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
TF L AC + EG + + K + + ++ +CG L++A ++
Sbjct: 565 ITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIE 624
Query: 304 Q-PDERNIISWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ P + W ++++G +I G + AR LF P N ++ M+ Y ++
Sbjct: 625 RSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEP-YNSANYLLMMNLYEYERMYD 683
Query: 359 EALDFVFLMRKTTKD 373
EA + M+ D
Sbjct: 684 EAESLKYAMKARGVD 698
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 275/608 (45%), Gaps = 77/608 (12%)
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN---KNAVSWNVIVR 217
++ QLH L V+ G + + +LVD + R+ + K+AV WN V
Sbjct: 70 LAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVA 129
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
A EA+ +F +M + +T A L AC + EG +H +K+ +
Sbjct: 130 MLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDA 189
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM- 336
+V G L MY + + A +LD +++ W ++V+ A G + +A EL M
Sbjct: 190 HPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMS 249
Query: 337 ---PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
PE NV +WN +L+G +R +EAL V M K D T+ +L A ++
Sbjct: 250 RSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLR 309
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR------------ 441
G E+H F RN +++ AL+DMY KCG L A+ + R
Sbjct: 310 HGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYA 369
Query: 442 ----------------------DKVSWNAVLTGYARRGQSEEAM---------------- 463
D +WN ++TGY+ GQS +A+
Sbjct: 370 NAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVV 429
Query: 464 --TSF-----------------SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
TS EMQ + +PS T LL ACA ++ ++GK++HCF
Sbjct: 430 SWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFA 489
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+R Y+ ++V AL+++Y+K L A +F+ ++++CN+M+ G + +GREA+
Sbjct: 490 LRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAI 549
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
E+F M G+KPD ITF +L AC G V ++FDSM KYG+ P E+Y CM+ L
Sbjct: 550 ELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDL 609
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R GY+ E DF+ R P +P + C +G L E AAR L L P+ +
Sbjct: 610 LARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANY 669
Query: 684 KITTNRFD 691
+ N ++
Sbjct: 670 LLMMNLYE 677
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 187/422 (44%), Gaps = 70/422 (16%)
Query: 81 NRAIECYGKCGNLDDARGLFDEM----PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
N + C + G +DDA L M PE + +WN +L +++G L + M
Sbjct: 226 NAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK 285
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ + T +++L+S A L ++H ++ +V ++LVD Y KC +
Sbjct: 286 QGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDC 345
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+++ D ++++N +WN +V Y AG A+ + M + + P + T N L
Sbjct: 346 AQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP-DITTWNGLITGYS 404
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
++ G V++ + V N++SWTS+
Sbjct: 405 MN----GQSSQAVLLLRQIKAAGVT--------------------------PNVVSWTSL 434
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG +G ++++ F M+K
Sbjct: 435 ISGSCHNGE-------------------------------YEDSFYFCHEMQKDGVQPSL 463
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT+ ++L CAGL+ K GKE+H F R Y ++ VS AL+DMY K G+L SA++ F
Sbjct: 464 VTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFES 523
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLE 494
+ Q+++ V NA+LTG A GQ EA+ F +M W + +P TF LL AC ++ +
Sbjct: 524 I-QQKNLVLCNAMLTGLAVHGQGREAIELFHDM-WNSGLKPDSITFTALLTACRSMGLVT 581
Query: 495 QG 496
+G
Sbjct: 582 EG 583
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 149/375 (39%), Gaps = 77/375 (20%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPER---------------------------- 106
P V+ ++ Y KCG LD A+ + D + R
Sbjct: 325 PDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELM 384
Query: 107 -------DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
D +WN ++ Y+ NG + + L + +GV+ N +++ +++ S E
Sbjct: 385 KKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEY 444
Query: 160 -------------GVS----------------------KQLHGLIVKRGFCGNVILESSL 184
GV K+LH ++R + ++++ ++L
Sbjct: 445 EDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTAL 504
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+D Y K + A+ +F+ IQ KN V N ++ V G G+EA+ +F M ++P +
Sbjct: 505 IDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDS 564
Query: 245 FTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
TF L AC + EG + + K + + ++ +CG L++A ++
Sbjct: 565 ITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIE 624
Query: 304 Q-PDERNIISWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ P + W ++++G +I G + AR LF P N ++ M+ Y ++
Sbjct: 625 RSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEP-YNSANYLLMMNLYEYERMYD 683
Query: 359 EALDFVFLMRKTTKD 373
EA + M+ D
Sbjct: 684 EAESLKYAMKARGVD 698
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 273/528 (51%), Gaps = 44/528 (8%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++ +HG IVK GF ++ + + LV+ Y KC VM A ++FD++ +N +W ++ Y+
Sbjct: 77 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ A+ +F KML P N+T L ACS L S G Q+H +IK + D +
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL+ Y K RLE +AI F + E++V
Sbjct: 197 GNSLSSFYSKFRRLE-----------------------FAIKA--------FKIIKEKDV 225
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
ISW ++++ + +L F M ++ TL +L+ C + + +G ++H
Sbjct: 226 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 285
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ Y S+I + N+++ +Y KCG L A+ F M + + V+WNA++ G+A+ E
Sbjct: 286 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGHAKMMDLAE 344
Query: 462 -----------AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
A+ F ++ + +P FTF ++L+ C+N+ +LEQG+QIH +I++
Sbjct: 345 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 404
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+VV ALV +Y KC ++ A + F E S +I SMI GF + ++AL++F M
Sbjct: 405 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 464
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ GIKP+ +TF G+L AC H G AL +F+ M+ +Y I P ++H+ C+I +Y R G
Sbjct: 465 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGR 524
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++E D V++M F P + + CR +G + LG +AA +L +L P
Sbjct: 525 VEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKP 572
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 235/464 (50%), Gaps = 31/464 (6%)
Query: 34 LKSDEP-----VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
+ ++EP + S Y L Q C EAR + ++V +F++ + Y
Sbjct: 45 VDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYS 104
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG ++ A +FD +P R+ +W +L Y QN P L+LF+ M +G + T
Sbjct: 105 KCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGI 164
Query: 149 VLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
VL SS + +E G KQ+H ++K + + +SL Y K + A + F I+
Sbjct: 165 VLNACSSLQSIEFG--KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE 222
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ +SW ++ G ++ F ML + ++P +T + L AC + + G QI
Sbjct: 223 KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI 282
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H + IK+ + ++ S+ +Y+KCG L +A+ L + + N+++W ++++G+A
Sbjct: 283 HSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHA----- 337
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
++ E +V A +G T ++++ L R K D T +L+VC
Sbjct: 338 -----KMMDLAEDDV---AAHKSGSTALAMFQK------LYRSGMKP-DLFTFSSVLSVC 382
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ L ++ G+++HG I ++ +++ V AL+ MY KCG++ A F +M R +SW
Sbjct: 383 SNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS-RTMISW 441
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACAN 489
+++TG+AR G S++A+ F +M+ +P++ TF +L+AC++
Sbjct: 442 TSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH 485
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
TR + LL C + + + + IH +++ + ++ LV VY+KC +E A
Sbjct: 54 TRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAH 113
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+VF +V +++ G+ N AL++F M + G P + T +L AC
Sbjct: 114 KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNAC 169
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/643 (28%), Positives = 311/643 (48%), Gaps = 63/643 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + YGKCG L DA +FD + ERD SWN+++ A + ++ F M
Sbjct: 47 VTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLM 106
Query: 137 SGVSANQITYANVLRSSA---EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G + T ++ + + + L + KQ+HG ++G ++L+ Y K
Sbjct: 107 EGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHW-RTFSNNALMAMYAKLGR 165
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DA+ + ++++ V+WN ++ + EA++ M+ E ++P TFA+ L A
Sbjct: 166 LDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPA 225
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIIS 312
CS L G +IH ++ D ++ +GS L +MY CG++E
Sbjct: 226 CSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVE---------------- 269
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
SGR+ +F+ + +R + WNAM+AGY +S ++AL +F+ +
Sbjct: 270 ----------SGRL-----VFDSVLDRKIGLWNAMIAGYAQSEHDEKAL-MLFIEMEAAA 313
Query: 373 DI--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+ + T+ I+ I + +HG++ + +N ++ NAL+DMY + G+++++
Sbjct: 314 GLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTS 373
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-----------------WET 473
+ F M + RD VSWN ++T Y G+S +A+ EMQ
Sbjct: 374 KRIFDSM-EDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPF 432
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+P+ T T+L CA++S+L +GK+IH + IRN V ALV++Y KC CL A R
Sbjct: 433 KPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARR 492
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-----IKPDHITFHGILLAC 588
VF + +VI N +I+ + + +G+E+LE+F M EG +KP +TF + +C
Sbjct: 493 VFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASC 552
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN-PTVP 647
H G V L F M+ ++GI P +HY C++ L R G ++E VN MP V
Sbjct: 553 SHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVG 612
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ CR +GE AA L +L P + + +N +
Sbjct: 613 AWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIY 655
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 227/483 (46%), Gaps = 65/483 (13%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG--NVILESSLVDAYGKC 191
M SG S + + VL++ A EL + KQ+H + K G+ +V ++++LV+ YGKC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ DA ++FD I ++ VSWN I+ + A+ F ML E P +FT +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 252 FACSFL---SSPYEGMQIHGVIIKI----DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
ACS L + G QIHG + F + +L MY K GRL+DA+ LL
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNN-----ALMAMYAKLGRLDDAKSLLVL 175
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
++R++++W S++S ++ + R + EAL F+
Sbjct: 176 FEDRDLVTWNSMISSFSQNER-------------------------------FMEALMFL 204
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR-NDYSSNIFVSNALLDMYRK 423
LM D VT +L C+ L ++ GKE+H + R +D N FV +AL+DMY
Sbjct: 205 RLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCN 264
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFE 481
CG + S R+ F + R+ + WNA++ GYA+ E+A+ F EM+ + T
Sbjct: 265 CGQVESGRLVFDSVLDRKIGL-WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMS 323
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+++ A + + + IH +VI+ E N + AL+++Y++ ++ + R+F
Sbjct: 324 SIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383
Query: 542 DVIICNSMILGFCHNERGREALEVFGLM----------------KKEGIKPDHITFHGIL 585
D++ N++I + R +AL + M K+ KP+ IT +L
Sbjct: 384 DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVL 443
Query: 586 LAC 588
C
Sbjct: 444 PGC 446
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 116/222 (52%), Gaps = 8/222 (3%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS--NIFVSNALLDMYRKCGNLRSARI 432
D +L AG+ E+ +GK++H + + Y S ++ + N L++MY KCG L A
Sbjct: 9 DNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYK 68
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANI- 490
F ++++ RD+VSWN++++ R + E A+ +F M E PS FT ++ AC+N+
Sbjct: 69 VFDRITE-RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLR 127
Query: 491 --SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
L GKQIH R + AL+ +Y K L+ A + D++ NS
Sbjct: 128 KRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNS 186
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
MI F NER EAL LM EG+KPD +TF +L AC H
Sbjct: 187 MISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSH 228
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS A+ + +++ + + V + + ++ Y KCG L+ AR +FD+MP R+ +W
Sbjct: 446 CASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITW 505
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
N ++ AY +G +LELF DM G ++ V
Sbjct: 506 NVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEV 543
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/643 (29%), Positives = 300/643 (46%), Gaps = 43/643 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+L L + C S +I +L S + F++ + Y + ++ A LF E
Sbjct: 140 NLLVKLLETCCSKLSI---SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQE 196
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVS----ANQITYANVLRSSAEEL 157
P R WNA+L +Y G TL LF MN+ S VS + + + L+S A
Sbjct: 197 TPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLR 256
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+L + K +HG + K G++ + S+L+D Y KC M DA ++F + + V W I+
Sbjct: 257 KLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIIS 316
Query: 218 RYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y +G+ + A+ F +M+ E + P T + AC+ LS+ G +HG + + +
Sbjct: 317 GYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD 376
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ SL +Y K +G I+ A LF EM
Sbjct: 377 NKLCLANSLLHLYGK-------------------------------TGSIKNASNLFREM 405
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++++ISW+ M+A Y + + LD M + VT+ +L CA +S ++ G
Sbjct: 406 SDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGM 465
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++H + VS AL+DMY KC + A F +M ++D ++W + +GYA
Sbjct: 466 KIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADN 524
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G E+M F M TRP +L + + L+Q +H FVI+N +E N
Sbjct: 525 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIG 584
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-I 574
+L+EVY KC +E A +VFK + DV+ +S+I + + +G EAL++F M
Sbjct: 585 ASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDT 644
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
KP+++TF IL AC H G +K + FD M KY + P EHY M+ L R G +
Sbjct: 645 KPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMAL 704
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
D +N MP + + CR + +GE AA+ L L+P
Sbjct: 705 DVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDP 747
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 238/463 (51%), Gaps = 36/463 (7%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
+ P +YS+ L + CA + ++ + + L +F+ + I+ Y KCG ++DA
Sbjct: 238 ERPDNYSVSIAL-KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDA 296
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAE 155
+F E P+ D W +++ Y Q+G P L F M S VS + +T +V + A+
Sbjct: 297 VKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQ 356
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ + +HG + ++G + L +SL+ YGK + +A +F ++ +K+ +SW+ +
Sbjct: 357 LSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 416
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V Y G + + +F +ML + I+P T + L AC+ +S+ EGM+IH + + F
Sbjct: 417 VACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 476
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E + V +L +MY+KC E A L ++ ++++I+W + SGYA +G + E+ +F
Sbjct: 477 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVF-- 534
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
RN ML+ TR D + L IL + L ++
Sbjct: 535 ---RN------MLSSGTRP--------------------DAIALVKILTTISELGILQQA 565
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+H F+ +N + +N F+ +L+++Y KC ++ A F M+ +D V+W++++ Y
Sbjct: 566 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGF 624
Query: 456 RGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQG 496
GQ EEA+ F +M +T+P+ TF ++L+AC++ +++G
Sbjct: 625 HGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEG 667
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 209/459 (45%), Gaps = 19/459 (4%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+L S V+ + L++ L L N + YGK G++ +A LF EM ++D
Sbjct: 360 FKLGRSVHGFVKRKGLDNKLC---------LANSLLHLYGKTGSIKNASNLFREMSDKDI 410
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SW+ M+ Y NG L+LF +M + N +T +VLR+ A L ++H L
Sbjct: 411 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL 470
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
V GF + ++L+D Y KC A +F+ + K+ ++W V+ Y G E+
Sbjct: 471 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHES 530
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F ML RP L S L + + +H +IK FE + + SL E+
Sbjct: 531 MWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEV 590
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER-----NVIS 343
Y KC +EDA + +++++W+SI++ Y G+ EA +LF +M N ++
Sbjct: 591 YAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVT 650
Query: 344 WNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ ++L+ + S L KE ++ F ++ K + +++++ + E+ M +V I
Sbjct: 651 FISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDV---I 707
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM-SQRRDKVSWNAVLTGYARRGQSEE 461
+ + + ALL R N++ + + S + + +L+ ++
Sbjct: 708 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWH 767
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIH 500
+ T + E R +K ++++ + S G +IH
Sbjct: 768 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIH 806
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 285/597 (47%), Gaps = 67/597 (11%)
Query: 148 NVLRSSAEELELGVSKQL-HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
N+L+ S + + QL H ++K G +V L ++L++ Y K AR++FD++
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 207 KNAVSWNVIVRRY---------------------------LVA----GNGKEAVVMFFKM 235
+ A SWN ++ Y +V G +A+ + M
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++E I P FT N L + + G ++H I+K+ G+ V SL MY KCG
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
A+ + D+ R+I SW ++++ + G++ A F +M ER++++WN+M++G+ +
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 356 LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
ALD F ++R + D+ TL +L+ CA L ++ +GK++H I + + V
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQR--------------------------------RD 442
NAL+ MY +CG + +AR Q + RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
V+W A++ GY + G EA+ F M RP+ +T +L+ ++++SL GKQIH
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGR 560
+++ +V AL+ +Y K + A R F D + SMI+ +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EALE+F M EG++PDHIT+ G+ AC H G V Q+FD M+ IIP L HY CM
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L+ R G ++E ++F+ +MP P V + CR + LG+ AA RL L P
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 254/523 (48%), Gaps = 39/523 (7%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
N+L KS K T +KS S L +L + + + + ARKL +
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEM-- 75
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
P F N + Y K G++D FD++P+RD SW M+ Y G + + +
Sbjct: 76 --PLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
DM G+ Q T NVL S A + K++H IVK G GNV + +SL++ Y K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 191 C------------MVMTD-------------------ARRMFDDIQNKNAVSWNVIVRRY 219
C MV+ D A F+ + ++ V+WN ++ +
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 220 LVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G A+ +F KMLR+ + P FT A+ L AC+ L G QIH I+ F+
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERN--IISWTSIVSGYAISGRIREARELFNEM 336
+VL +L MY +CG +E AR L++Q ++ I +T+++ GY G + +A+ +F +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+R+V++W AM+ GY + + EA++ M + + TL +L+V + L+ + GK
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++HG ++ ++ VSNAL+ MY K GN+ SA F + RD VSW +++ A+
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
G +EEA+ F M E RP T+ + +AC + + QG+Q
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 303/603 (50%), Gaps = 32/603 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G L AR +FD +P D ++NA++ AY+ G ++L+ M + V N+ T+ VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ + +L + +H G ++ + ++L+D Y +C A +F + ++ V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+WN ++ Y G A+ M R +RP T + L + + ++G +H
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ R LDQ +E+ +I T+++ YA + A
Sbjct: 227 CL---------------------------RAYLDQNEEQVLIG-TALLDMYAKCKHLVYA 258
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAG 388
+F+ M RN ++W+A++ G+ EA + F ++ + + ++ L VCA
Sbjct: 259 CRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCAS 318
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L++++MG ++H + ++ +++ N+LL MY K G + A + F +++ + D +S+ A
Sbjct: 319 LADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGA 377
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+L+GY + G++EEA F +MQ +P T +L+ AC+++++L+ G+ H VI
Sbjct: 378 LLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRG 437
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +L+++Y KC ++ + +VF + + D++ N+MI G+ + G+EA +F
Sbjct: 438 LALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFL 497
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK +G +PD +TF ++ AC H G V +FD+M KYGI+P++EHY CM+ L R
Sbjct: 498 SMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 557
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G++ E F+ MP V + + CR + LG+ +R + +L P F + +
Sbjct: 558 GFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLS 617
Query: 688 NRF 690
N F
Sbjct: 618 NIF 620
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 38/466 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + + + + C++ + R + ++ +F+ I+ Y +C A
Sbjct: 96 PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAAN 155
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEEL 157
+F +MP RD +WNAML Y +G + LDM + G+ N T ++L A+
Sbjct: 156 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHG 215
Query: 158 ELGVSKQLHGLIVKRGFCGN---VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L +H ++ N V++ ++L+D Y KC + A R+F + +N V+W+
Sbjct: 216 ALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSA 275
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT-FANALFACSFLSSPYEGMQIHGVIIKI 273
++ +++ EA +F ML E + L+ T A+AL C+ L+ G Q+H ++ K
Sbjct: 276 LIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS 335
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D SL MY K G + +A L D+ ++ IS+ +++SGY +G+ EA +F
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+M NV D T+ ++ C+ L+ ++
Sbjct: 396 KKMQACNV-------------------------------QPDIATMVSLIPACSHLAALQ 424
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G+ HG + + + N+L+DMY KCG + +R F +M RD VSWN ++ GY
Sbjct: 425 HGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA-RDIVSWNTMIAGY 483
Query: 454 ARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
G +EA T F M+ + P TF L+AAC++ + +GK
Sbjct: 484 GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKH 529
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 8/340 (2%)
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W + + G++ AR++F+ +P + ++NA++ Y+ + A+D M
Sbjct: 36 WQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRV 95
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
++ T +L C+ L+++ G+ +H +++FVS AL+D+Y +C A
Sbjct: 96 PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAAN 155
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANI 490
F +M RD V+WNA+L GYA G A+ +MQ RP+ T +LL A
Sbjct: 156 VFAKMPM-RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQH 214
Query: 491 SSLEQGKQIHCFVIRNCYEIN---VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+L QG +H + +R + N V+ AL+++Y KC L YA RVF + + + +
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274
Query: 548 SMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
++I GF +R EA +F M EG+ + L C ++++ Q ++
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ-LHALLA 333
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
K GI L ++ +Y + G + E + + T+
Sbjct: 334 KSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTI 373
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 316/655 (48%), Gaps = 45/655 (6%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L L + C S +I + L S + F++ + Y + +L A LF+E
Sbjct: 6 LLVKLLETCCSKISIPQ---LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEET 62
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS---ANQITYANVLRSSA--EELE 158
P + WNA+L +Y G TL LF MN ++ + T + L+S + ++LE
Sbjct: 63 PCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLE 122
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
LG K +HG + K+ ++ + S+L++ Y KC M DA ++F + ++ V W I+
Sbjct: 123 LG--KMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITG 180
Query: 219 YLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+ + A+ F +M+ E + P T +A AC+ LS G +HG + + F+
Sbjct: 181 YEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDT 240
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ S+ +Y K +G IR A LF EMP
Sbjct: 241 KLCLANSILNLYGK-------------------------------TGSIRSAANLFREMP 269
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+++ISW++M+A Y + AL+ M ++++VT+ L CA S ++ GK
Sbjct: 270 YKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKH 329
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + +I VS AL+DMY KC + ++A F +M ++D VSW + +GYA G
Sbjct: 330 IHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMP-KKDVVSWAVLFSGYAEIG 388
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ +++ F M + TRP +LAA + + ++Q +H FV ++ ++ N
Sbjct: 389 MAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGA 448
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IK 575
+L+E+Y KC ++ A +VFK DV+ +S+I + + +G EAL++F M +K
Sbjct: 449 SLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVK 508
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ +TF IL AC H G ++ ++ F M +Y ++P EHY M+ L R G + + D
Sbjct: 509 PNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALD 568
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+N MP + + CR + +GE AA L L+P + + +N +
Sbjct: 569 MINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIY 623
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 177/386 (45%), Gaps = 36/386 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CASS + E + + V + + + ++ Y KC + +A LF+ MP++D SW
Sbjct: 318 CASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSW 377
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ---LHGL 168
+ Y + G ++L +F +M G + I +L +S+ ELG+ +Q LH
Sbjct: 378 AVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASS---ELGIVQQALCLHAF 434
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+ K GF N + +SL++ Y KC + +A ++F ++ K+ V+W+ I+ Y G G+EA
Sbjct: 435 VSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEA 494
Query: 229 VVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLT 286
+ +F++M D++P + TF + L ACS EG+++ H ++ + + G +
Sbjct: 495 LKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMV 554
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
++ + G L+ A ++++ P + W +++ I I+ E+ N+ +
Sbjct: 555 DLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIK-----IGELAALNLFLLD 609
Query: 346 AMLAGYTRSLL--------WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
AGY L W +A L+++ G S +++ E
Sbjct: 610 PNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENR-----------FKKIVGQSMVEIKNE 658
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRK 423
VH FI + + S+ + M RK
Sbjct: 659 VHSFIASDRFHGE---SDQIYGMLRK 681
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/510 (30%), Positives = 259/510 (50%), Gaps = 35/510 (6%)
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LV+ Y K A+ + N++ V+W ++ + G A+ F M R+ I+P
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
+FTF A A L SP G Q+H + +K G +++++V C
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKA---------GQISDVFVGC----------- 147
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
S Y+ +G EAR++F+EMPERN+ +WNA L+ + +AL
Sbjct: 148 -----------SAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTA 196
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
R + + +T LN CAG S +++G+++HGF+ ++ + +++ V+N L+D Y K
Sbjct: 197 FIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGK 256
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFET 482
C + + I F +S+ D VSW +++ Y + + E+A F + E P+ F +
Sbjct: 257 CHQVGCSEIIFSGISKPND-VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSS 315
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L+ACA +S LE GK +H ++ C N+ ALV++Y KC +E A R F E +
Sbjct: 316 VLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERN 375
Query: 543 VIICNSMILGFCHNERGREALEVFGLMK--KEGIKPDHITFHGILLACIHEGNVKLALQF 600
++ N+MI G+ H + A+ +F M + P+++TF +L AC G+V + ++
Sbjct: 376 LVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F+SMR +YGI P EHY C++ L R G +++ F+ +MP PTV + + + G
Sbjct: 436 FESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFG 495
Query: 661 YATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ LG+ AA L EL+P + +N F
Sbjct: 496 KSELGKVAADNLFELDPLDSGNHVLLSNMF 525
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 211/459 (45%), Gaps = 38/459 (8%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTP-PVFLLNRAIECYGKCGNLDDARGLFDEMP 104
A L + S++ R + ++ P P F+ N + Y K + A+ L P
Sbjct: 10 ASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTP 69
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R +W A++ QNG L F +M + N T+ ++S V KQ
Sbjct: 70 NRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQ 129
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L VK G +V + S D Y K + +AR+MFD++ +N +WN + ++ G
Sbjct: 130 VHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGR 189
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+A+ F + E P TF L AC+ S G Q+HG +++ FE D V
Sbjct: 190 YDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANG 249
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L + Y KC ++ + + + N +SW S++ Y + N+ E+ +
Sbjct: 250 LIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSY-----------VQNDEEEKACL-- 296
Query: 345 NAMLAGYTRSLLWKEALDFVFL-MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
VFL RK + + +L+ CAGLS +++GK VH
Sbjct: 297 -------------------VFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAV 337
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ NIFV +AL+DMY KCG++ A F +M + R+ V+WNA++ GYA +GQ++ A+
Sbjct: 338 KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE-RNLVTWNAMIGGYAHQGQADMAV 396
Query: 464 TSFSEMQWETR---PSKFTFETLLAACANISSLEQGKQI 499
T F EM + P+ TF +L+AC+ S+ G +I
Sbjct: 397 TLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 12/368 (3%)
Query: 282 LGSLTEMYV--KCGRLEDAR-----GLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
L SL E V +C RL A LD P I + +V+ Y+ R A+ L +
Sbjct: 9 LASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFI--YNHLVNMYSKLDRPNSAQLLLS 66
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
P R+V++W A++AG ++ + AL MR+ + + T L +
Sbjct: 67 LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK+VH + S++FV + DMY K G AR F +M + R+ +WNA L+
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE-RNIATWNAYLSNSV 185
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G+ ++A+T+F E + E P+ TF L ACA S L G+Q+H FV+++ +E +V
Sbjct: 186 LEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVS 245
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
L++ Y KC + + +F S + + SMI+ + N+ +A VF +KEG
Sbjct: 246 VANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEG 305
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I+P +L AC +++ + ++ K ++ + ++ +Y + G +++
Sbjct: 306 IEPTDFMVSSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 364
Query: 634 EDFVNRMP 641
E + MP
Sbjct: 365 ERAFDEMP 372
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP + + + + CA + + + + V +F+ + ++ YGKCG+++DA
Sbjct: 307 EPTDF-MVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAE 365
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAE 155
FDEMPER+ +WNAM+G Y G + LF +M V+ N +T+ VL + +
Sbjct: 366 RAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSR 425
Query: 156 ELELGVSKQL 165
+ V ++
Sbjct: 426 AGSVNVGMEI 435
>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/644 (26%), Positives = 303/644 (47%), Gaps = 81/644 (12%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F L K + RK+ + LV + + + + YG G+++ AR +FD + D
Sbjct: 90 FSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDL 149
Query: 109 GSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW M+ Y N ++ + + + + ++ VL++ +E E ++LH
Sbjct: 150 YSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHC 209
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
IVK G + +L + LVD Y KC + D+RR+FD+I ++N V W ++ Y+ KE
Sbjct: 210 QIVKVGSPDSFVL-TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKE 268
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+V+F +M + +T + + AC+ L + ++G +HG +IK F+ + ++ L +
Sbjct: 269 GLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLD 328
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
+Y KCG + DA + D+ +++SWT+++ GYA G REA +LF + ER
Sbjct: 329 LYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTD--ER-------- 378
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
WK+ L + VT +L+ CA + MG+ VH +
Sbjct: 379 ---------WKDLLP------------NTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGS 417
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
F NAL+DMY KC + AR + ++ +D ++WN++++GY + G + EA+ F
Sbjct: 418 EDATF-ENALVDMYAKCHMIGDAR-YVFETVFDKDVIAWNSIISGYTQNGYAYEALELFD 475
Query: 468 EMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+M+ ++ P T ++L+ACA++ + G +H + I+
Sbjct: 476 QMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKA-------------------- 515
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
G +LE+FG M KE ++P+ + F IL
Sbjct: 516 -------------------------GLLSGRDCSRSLELFGDMLKEKLEPNEVIFTTILS 550
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G + ++F++M Y +P ++HY CM+ L R G ++E DF+ ++P P V
Sbjct: 551 ACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDV 610
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+L CR + LGE A RR+ EL+P + + +N +
Sbjct: 611 SLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLY 654
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 174/358 (48%), Gaps = 33/358 (9%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+++ + + C+ + E RKL +V +P F+L ++ Y KC ++D+R +FDE+
Sbjct: 187 VFSIVLKACSELRETDEGRKLHCQIVKV-GSPDSFVLTGLVDMYAKCREVEDSRRVFDEI 245
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+R+ W +M+ Y QN L LF M V NQ T +++ + + L K
Sbjct: 246 LDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGK 305
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+HG ++K GF N L + L+D Y KC + DA +FD++ + VSW ++ Y G
Sbjct: 306 WVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRG 365
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA+ +F +D+ P T ++ L AC+ S G +H + IK+ E D
Sbjct: 366 YPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFEN 424
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KC + DAR + + ++++I+W SI+SGY +G EA ELF++M +V
Sbjct: 425 ALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYP 484
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
D +TL +L+ CA + ++G +HG+
Sbjct: 485 -------------------------------DAITLVSVLSACASVGAYRVGSSLHGY 511
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/616 (28%), Positives = 297/616 (48%), Gaps = 62/616 (10%)
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-----LDMNHSGVSAN 142
C L+ A+ F + D +++L + + G L+ F + ++ S S +
Sbjct: 41 ASCNALESAQETFTSV---DASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQD 97
Query: 143 QITY--ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
I + +++L S + L +QLHG I+ GF + IL LV Y ++ DA +
Sbjct: 98 LIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI 157
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
++ + WN+++ Y+ G ++A+ + +M+++ IRP NFT+ + L AC
Sbjct: 158 TENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC------ 211
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G+++ LG E++ S Y
Sbjct: 212 ----------------GEELDLGFGKEVHESIN-----------------------ASLY 232
Query: 321 AISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A G EA ELF M E N+I WN + GY R+ +K AL+ + MRK +D
Sbjct: 233 ASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDS 292
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V L + L C+ + + K+GKE+H F R+ + V NAL+ MY +C +L+ A + F Q
Sbjct: 293 VALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLF-Q 351
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+ + + ++WN++++G +SEEA EM + P+ T ++L CA +++L+
Sbjct: 352 LMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQH 411
Query: 496 GKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+ HC++ R ++ +++ ALV++Y + + A RVF D + SMI G+
Sbjct: 412 GKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYG 471
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
G+ AL++F M IKPDHIT +L AC H G V F+ MR YG+ P L
Sbjct: 472 MQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHL 531
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EH+ CM L+ R G + + ++ + MP+ PT M + CR + +GEWAA +L E
Sbjct: 532 EHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLE 591
Query: 675 LNPWAPFQFKITTNRF 690
+ P P + + N +
Sbjct: 592 MKPENPGYYVLIANMY 607
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 5/255 (1%)
Query: 87 YGKCGNLDDARGLFDEMPERDGG----SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
Y G ++A LF M D WN + G Y + G LEL M G +
Sbjct: 232 YASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLD 291
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ L + + + + K++H ++ F ++++L+ Y +C + A +F
Sbjct: 292 SVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQ 351
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
++ K+ ++WN I+ +EA + +ML I P T A+ L C+ +++
Sbjct: 352 LMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQH 411
Query: 263 GMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G + H + + DF+ ++ +L +MY + G++ +AR + D ER+ +++TS+++GY
Sbjct: 412 GKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYG 471
Query: 322 ISGRIREARELFNEM 336
+ G + A +LF EM
Sbjct: 472 MQGEGQAALKLFEEM 486
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 19/248 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y +C +L A LF M + +WN+++ L +M G+
Sbjct: 331 NALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIE 390
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARR 199
N +T A+VL A L K+ H + +R F +++L ++LVD Y + + +ARR
Sbjct: 391 PNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARR 450
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+FD + ++ +++ ++ Y + G G+ A+ +F +M I+P + T L ACS
Sbjct: 451 VFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACS---- 506
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLG---------SLTEMYVKCGRLEDARGLL-DQPDERN 309
+ G+ G ++ FE + G +T+++ + G L A+ ++ + P +
Sbjct: 507 -HSGLVTQGQLL---FEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPT 562
Query: 310 IISWTSIV 317
W +++
Sbjct: 563 PAMWATLI 570
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N ++ Y + G + +AR +FD + ERD ++ +M+ Y G L+LF +MN+
Sbjct: 429 LLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNN 488
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR----GFCGNVILESSLVDAYGKCM 192
+ + IT VL + + G+ Q L K G ++ + + D +G+
Sbjct: 489 FQIKPDHITMIAVLSACSHS---GLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAG 545
Query: 193 VMTDARRMFDDIQNK-NAVSWNVIV 216
++ A+ + ++ K W ++
Sbjct: 546 LLNKAKEIIRNMPYKPTPAMWATLI 570
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 257/499 (51%), Gaps = 36/499 (7%)
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFAC 254
+A +F I N ++N+++R + F+ +++ IRP NFT+ AC
Sbjct: 77 NASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIAC 136
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L G H ++K D V SL MY +CG L
Sbjct: 137 ANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELG------------------ 178
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
AR +F+E+ E++++SWN+M++GY+R +A+ MR +
Sbjct: 179 -------------CARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEP 225
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D++TL IL C L ++ +G + GF+ N+ N FV +AL+ MY KCG+L SAR F
Sbjct: 226 DEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVF 285
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+M ++D V+WNA++TGYA+ G S+EA+ FS M+ P K T +L+ACA+I +L
Sbjct: 286 DRMV-KKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGAL 344
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ GK + + + ++ AL+++Y KC L+ A+RVF++ + + N+MI
Sbjct: 345 DFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISAL 404
Query: 554 CHNERGREALEVFGLMKKEG--IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ R +E+L +F M KEG ++P+ I+F G+L AC+H G V Q FD M +G++
Sbjct: 405 AFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLV 464
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P++EH+ CM+ L R G++ E DF+ +MP P +L + C+K + E
Sbjct: 465 PKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHM 524
Query: 672 LNELNPWAPFQFKITTNRF 690
L E+ P + I++ F
Sbjct: 525 LLEMEPLNSGNYIISSKIF 543
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 147/579 (25%), Positives = 265/579 (45%), Gaps = 76/579 (13%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
S+ TK ++ + + L + C S+K++ +++ + ++ P FLL+R
Sbjct: 12 SRHFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSL---QQIHTQMIINAIHKPNFLLHR 68
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAML-GAYTQNGFPGRTLELFLDMNHSGVSA 141
I+ + ++A LF ++P + ++N M+ G T T+E + M G+
Sbjct: 69 FIDLK----DFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRP 124
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N TY V + A L L + H ++K G C + + SL+ Y +C + ARR+F
Sbjct: 125 NNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVF 184
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D+I K+ VSWN ++ Y G +AV +F +M P T + L AC L
Sbjct: 185 DEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLG 244
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G I G +++ + + + V +L MY KCG L
Sbjct: 245 LGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLS------------------------- 279
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
AR +F+ M +++V++WNAM+ GY ++ + EA+ MR++ + D++TL
Sbjct: 280 ------SARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVG 333
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L+ CA + + GK + + ++I+VS AL+DMY KCG+L A F M Q +
Sbjct: 334 VLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQ-K 392
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQ 498
++VSWNA+++ A G+ +E+++ F M E RP+ +F +L+AC + +++G+Q
Sbjct: 393 NEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQ 452
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+ +++ G + ++ C ++ R G H
Sbjct: 453 L--------FDLMSSSFGLVPKIEHHSCMVDLLARA-----------------GHVH--- 484
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
E + ++K KPD + +L AC NV ++
Sbjct: 485 -----EAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVS 518
>gi|302816163|ref|XP_002989761.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
gi|300142538|gb|EFJ09238.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
Length = 749
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 203/742 (27%), Positives = 320/742 (43%), Gaps = 142/742 (19%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPT--PPVFLLNRAIECYGKCGNLDDARGLFDE- 102
A+L + C +S + R++ ++ VFLLN I+ YGKCG L +AR +FD
Sbjct: 2 ANLLRSCGNSGDLSAGRRIHKRVLDLQRQHGQDVFLLNLVIDMYGKCGGLGEARAVFDAI 61
Query: 103 ------------------------------MPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
MP R+ SWN M+ A Q G R ++FL
Sbjct: 62 EHPNVFSFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRA-KIFL 120
Query: 133 DMNHSGVSANQITYANVL------------RSSAEELE------------------LGVS 162
+ IT+ +L R +E LG +
Sbjct: 121 ARIPQHSLPDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRA 180
Query: 163 KQLHG---LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K L LI K G L + L+ YG+C + DAR++FD + N SWN+++ Y
Sbjct: 181 KHLEEAEELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAY 240
Query: 220 LVAGNGKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
G+ EA+V+ +M + P T+ L ACS L + EG IH +I E
Sbjct: 241 AHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIVSGMES 300
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
N++ T+IV+ Y G + +A+ +F++MP
Sbjct: 301 -------------------------------NVVVATAIVNMYGKCGSMGDAKMVFDKMP 329
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++VI WN+M++ Y + L K ALD MR + D T L+ C+ L+ ++ GK+
Sbjct: 330 AKDVICWNSMISAYALNGLGKSALDLYARMRHSCVRPDAGTFVAALDACSVLNSLEDGKK 389
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------- 440
+H I + N+ V+ AL+ MY KCG L + F M R
Sbjct: 390 IHAAISASKLEWNVMVATALVSMYGKCGCLERSIAVFRAMEVRNLISWTAMLGALAHNGR 449
Query: 441 ---------------RDKVSWNAVLTGYARRGQSEEAMTSFSEM-------QWETRPSKF 478
R+ + WNA++ Y RG EA+ ++EM RP +
Sbjct: 450 DAAALELFARMRDEGREALLWNALIAAYTARGHPREALRLYAEMILAERRGAPPVRPDRN 509
Query: 479 TFETLLAACANI--SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
TF +L AC +I ++L +G+ IH I + +V+ AL+ +Y+KC L A+ +F+
Sbjct: 510 TFAAVLEACGSIGTAALGEGRMIHTQAIARACDTDVIVASALIAMYSKCGSLGDAVAIFR 569
Query: 537 E-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E S V++ +MI + H+ + ALE+F M + G+KP+ ITF +L +C +++
Sbjct: 570 ELSRKRSVVLVTTMIAAYGHHGKLELALELFWEMAQRGLKPNRITFVSLLSSCSAANSLR 629
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
A+ +F M I P EHY +I L R G + + E+ +N MPF P +
Sbjct: 630 EAVFYFQIMIHDCDIQPGAEHYHFVIDLLGRSGKVAQAEELINSMPFAPGCGAWMSLLAA 689
Query: 656 CRKNGYATLGEWAARRLNELNP 677
C ++ LG AA R+ E+ P
Sbjct: 690 CERHSKVELGRRAADRVFEMEP 711
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 174/369 (47%), Gaps = 46/369 (12%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C++ A+ E R + ++++ V + + YGKCG++ DA+ +FD+MP
Sbjct: 270 YVILLHACSNLGALREGRMIHASVIVSGMESNVVVATAIVNMYGKCGSMGDAKMVFDKMP 329
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D WN+M+ AY NG L+L+ M HS V + T+ L + + L K+
Sbjct: 330 AKDVICWNSMISAYALNGLGKSALDLYARMRHSCVRPDAGTFVAALDACSVLNSLEDGKK 389
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS------------- 211
+H I NV++ ++LV YGKC + + +F ++ +N +S
Sbjct: 390 IHAAISASKLEWNVMVATALVSMYGKCGCLERSIAVFRAMEVRNLISWTAMLGALAHNGR 449
Query: 212 --------------------WNVIVRRYLVAGNGKEAVVMFFKMLRED------IRPLNF 245
WN ++ Y G+ +EA+ ++ +M+ + +RP
Sbjct: 450 DAAALELFARMRDEGREALLWNALIAAYTARGHPREALRLYAEMILAERRGAPPVRPDRN 509
Query: 246 TFANALFACSFLSSPY--EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
TFA L AC + + EG IH I + D +V +L MY KCG L DA +
Sbjct: 510 TFAAVLEACGSIGTAALGEGRMIHTQAIARACDTDVIVASALIAMYSKCGSLGDAVAIFR 569
Query: 304 Q-PDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWK 358
+ +R+++ T++++ Y G++ A ELF EM +R N I++ ++L+ + + +
Sbjct: 570 ELSRKRSVVLVTTMIAAYGHHGKLELALELFWEMAQRGLKPNRITFVSLLSSCSAANSLR 629
Query: 359 EALDFVFLM 367
EA+ + +M
Sbjct: 630 EAVFYFQIM 638
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 198/734 (26%), Positives = 335/734 (45%), Gaps = 93/734 (12%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSL---YAH---------LFQLCASS 55
I+ +L + K ++ G LK D S +L YAH L + A S
Sbjct: 229 IVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKS 288
Query: 56 KAIVEARKL-----ESNLVTFYPTPPVFLLNRAIECYGK--CGNLDDARGLFDEMPERDG 108
I +A++ E N++++ I Y K G++ AR +FDEM R+
Sbjct: 289 GEIEDAKRAFDEMEEKNVISW---------TSLISGYAKHGYGHMAHARYVFDEMRHRNE 339
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK-QLHG 167
SW+ ML Y + G + LF M GV N A+++ + + + Q+HG
Sbjct: 340 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 399
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+VK G G+V + ++LV YG ++ +A+++F+++ + N VSW ++ Y +GN E
Sbjct: 400 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 459
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ ++ +M +E + TFA +C L G Q+ G II+ FE V SL
Sbjct: 460 VLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLIS 519
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
M+ +E EA +F+ M E ++ISWNAM
Sbjct: 520 MFSSFSSVE-------------------------------EACYVFDHMNECDIISWNAM 548
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
++ Y L +E+L MR + + TL +L+VC+ + +K G+ +HG + +
Sbjct: 549 ISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGL 608
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR-------------------------- 441
SN+ + N LL +Y + G A + F M++R
Sbjct: 609 DSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAE 668
Query: 442 -------DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLE 494
D+V+WNA++ G+A + EA+ ++ ++ + P+ + LAA AN++ LE
Sbjct: 669 LLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLE 728
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G+Q+H VI+ +E ++ A +++Y KC + +++ + + + N +I F
Sbjct: 729 EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFA 788
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ ++A E F M K G KPDH+TF +L AC H G V L ++DSM ++G+ P +
Sbjct: 789 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGI 848
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EH C+I L R G + E F+ MP P R + CR +G L A L E
Sbjct: 849 EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE 908
Query: 675 LNPWAPFQFKITTN 688
L+P + + +N
Sbjct: 909 LDPSDDSAYVLYSN 922
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 261/579 (45%), Gaps = 91/579 (15%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
SLY + QLC KA + + ++L+T + L + I Y K G++ AR +FD
Sbjct: 31 SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG 90
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MPER SW AM+ Y+QNG + LF DM H GV AN
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH------------------- 131
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+LVD + KC M DA +F + ++ VSWN ++ Y V
Sbjct: 132 --------------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQ 171
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G ++ MF MLR + P +T + L A + QIHG+I ++ + D+V
Sbjct: 172 GFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT 231
Query: 283 G-----------------------------------------------SLTEMYVKCGRL 295
G +L +MY K G +
Sbjct: 232 GLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEI 291
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAIS--GRIREARELFNEMPERNVISWNAMLAGYTR 353
EDA+ D+ +E+N+ISWTS++SGYA G + AR +F+EM RN SW+ ML+GY R
Sbjct: 292 EDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVR 351
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIF 412
L++EA+ M + + + ++ C+ + G +VHGF+ + +++
Sbjct: 352 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 411
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
V AL+ Y G + +A+ F +M + VSW +++ GY+ G E + + M+ E
Sbjct: 412 VGTALVHFYGSIGLVYNAQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 470
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
++ TF T+ ++C + G Q+ +I+ +E +V +L+ +++ +E A
Sbjct: 471 GVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 530
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
VF + D+I N+MI + H+ RE+L F M+
Sbjct: 531 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 569
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/519 (22%), Positives = 217/519 (41%), Gaps = 92/519 (17%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++ GF ++ L + L+ Y K + AR +FD + ++ VSW +V Y G
Sbjct: 52 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 111
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++A V+F D+R +AL +DF
Sbjct: 112 FEKAFVLF-----SDMRHCGVKANHAL---------------------VDF--------- 136
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+ KCG++EDA L ER+++SW +++ GYA+ G ++ +F M ++
Sbjct: 137 ----HSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPD 192
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDID----QVTLGLILNVCAGLSEIKMGKEVH- 399
L R+ L + + + GL++N A ++ K++
Sbjct: 193 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 252
Query: 400 GFIHRNDYSSNIFVS-----------NALLDMYRKCGNLRSARIWFYQMSQR-------- 440
G + ++ +SS ++ NAL+DMY K G + A+ F +M ++
Sbjct: 253 GMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 312
Query: 441 ------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETR 474
R++ SW+ +L+GY R G EEA+ F +M W
Sbjct: 313 ISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM-WGLGVE 371
Query: 475 PSKFTFETLLAACANISSL-EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P+ F +L+ AC+ + ++G Q+H FV++ +V ALV Y + A +
Sbjct: 372 PNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 431
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
+F+E +V+ S+++G+ + E L V+ M++EG+ + TF + +C +
Sbjct: 432 LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLED 491
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
L Q + +YG + +I ++ + ++E
Sbjct: 492 QVLGYQVLGHI-IQYGFEDSVSVANSLISMFSSFSSVEE 529
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
IL +C K G +H + N + S++ ++ L+ Y K G++ +AR F M +R
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPER- 94
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
VSW A+++GY++ G+ E+A FS+M+ HC
Sbjct: 95 SVVSWTAMVSGYSQNGRFEKAFVLFSDMR-----------------------------HC 125
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
V N ALV+ ++KC +E A +F DV+ N+MI G+ +
Sbjct: 126 GVKAN---------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 176
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH--YEC 619
+ +F M + G+ PD T +L A G + +A Q +GII QL + Y+
Sbjct: 177 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQI-------HGIITQLGYGSYDI 229
Query: 620 ----MIKLYCRYGYMKELEDFVNRM 640
+I Y + G ++ +D M
Sbjct: 230 VTGLLINAYAKNGSLRSAKDLRKGM 254
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
G+ EA+ S PS + +L C + + +QG IH +I N + ++
Sbjct: 12 GRLAEALKLLSSNPTRLDPSLYL--KILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+ Y K + A VF V+ +M+ G+ N R +A +F M+ G+K
Sbjct: 70 KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA 129
Query: 577 DH--ITFH 582
+H + FH
Sbjct: 130 NHALVDFH 137
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 274/537 (51%), Gaps = 31/537 (5%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ--NKNAVSWNVIVRRYLVA 222
LHG I+KR +SL + F D + N N V+V R A
Sbjct: 12 LHGFILKRNLSS---FHASL--------------KRFSDKKFFNPNHEDGGVVVERLCRA 54
Query: 223 GNGKEAVVMFF--KMLREDI-------RPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
EA+ + K+LRE + +P T+ N + CS + EG ++H I
Sbjct: 55 NRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS 114
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
F V+ L MY KCG L DAR + D+ R++ SW +V+GYA G + EAR+LF
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV-TLGLILNVCAGLSEI 392
+EM E++ SW AM+ GY + +EAL LM++ + T+ + + A + I
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GKE+HG I R S+ + ++L+DMY KCG + AR F ++ ++ D VSW +++
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-DVVSWTSMIDR 293
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y + + E + FSE+ RP+++TF +L ACA++++ E GKQ+H ++ R ++
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+LV++YTKC +E A V D++ S+I G N + EAL+ F L+ K
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
G KPDH+TF +L AC H G V+ L+FF S+ K+ + +HY C++ L R G +
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+L+ ++ MP P+ + + C G L E AA+ L ++ P P + N
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMAN 530
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 228/493 (46%), Gaps = 73/493 (14%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S Y +L Q+C+ ++A+ E +K+ ++ T P + + NR + Y KCG+L DAR +FDE
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-----------VSANQITYANVLR 151
MP RD SWN M+ Y + G +LF +M V +Q A VL
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 152 SSAEELE---------------------LGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
S + + + K++HG IV+ G + +L SSL+D YGK
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + +AR +FD I K+ VSW ++ RY + +E +F +++ RP +TFA
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC+ L++ G Q+HG + ++ F+ SL +MY KCG +E A+ ++D + ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+SWTS++ G A +G+ P+ EAL + L+ K+
Sbjct: 386 VSWTSLIGGCAQNGQ-----------PD--------------------EALKYFDLLLKS 414
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDMYRKCGNL 427
D VT +L+ C ++ G E I HR ++S+ + L+D+ + G
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT--CLVDLLARSGRF 472
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTFETLL 484
+ +M + K W +VL G + G +EEA +++ E + T +
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 485 AACANISSLEQGK 497
AA E+GK
Sbjct: 533 AAAGKWE--EEGK 543
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/594 (30%), Positives = 287/594 (48%), Gaps = 57/594 (9%)
Query: 103 MPER----DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
MPER SWN ++ QNG+ L++F M N IT A++L +
Sbjct: 1 MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + K +H + +K G GNV +E S++D Y KC A ++F +NKN WN ++
Sbjct: 61 LRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAA 120
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G ++A+ + M ++ +P T+ L G +G+ + FE
Sbjct: 121 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTIL----------SGHARNGLKTQA-FE-- 167
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+L + +M +K N++S+ ++SG+ SG EA ++F
Sbjct: 168 --LLSEMVQMGLK----------------PNVVSFNVLISGFQQSGLSYEALKVFR---- 205
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++ + E L+ MR + +T+ L CA L+ GKE+
Sbjct: 206 --------IMQSPSDGCNPNEVLNLS--MRP-----NPITITGALPACADLNLWCQGKEI 250
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG+ RN + NIFVS+AL+DMY KC ++ SA F+++ R+ VSWNA++ GY Q
Sbjct: 251 HGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDG-RNTVSWNALMAGYIYNKQ 309
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRG 516
EEA+ F EM E +PS TF L AC +I+++ G+ +H + + E+
Sbjct: 310 PEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIAS 369
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+++Y KC + A VF DV + N+MI F + R A VF M+ GI P
Sbjct: 370 ALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILP 429
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
DHITF +L AC +G V+ ++F+SM YG+ LEHY CM+ + G + E DF
Sbjct: 430 DHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDF 489
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ +MP+ P M + CR + +GE AA+ L EL P + + +N +
Sbjct: 490 IRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIY 543
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 197/454 (43%), Gaps = 55/454 (12%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C KA+ + + + + V++ I+ Y KCG+ D A +F +
Sbjct: 49 ASILPACTGLKALRLGKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAEN 108
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
++ WN M+ AY G L L M G + ITY +L A + +L
Sbjct: 109 KNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFEL 168
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
+V+ G NV+ + L+ + + + +A ++F +Q+ + N
Sbjct: 169 LSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSD------------GCNP 216
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
E +L +RP T AL AC+ L+ +G +IHG ++ FE + V +L
Sbjct: 217 NE-------VLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSAL 269
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KC ++ A + + D RN +SW ++++GY ++N+ PE
Sbjct: 270 VDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGY-----------IYNKQPE------- 311
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
EAL M +T ++ C ++ I+ G+ +HG+ +
Sbjct: 312 -------------EALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKC 358
Query: 406 --DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
D N +++AL+DMY KCG++ A+ F +D WNA+++ ++ G + A
Sbjct: 359 QLDELKNA-IASALIDMYAKCGSILDAKSVF-DSEVEKDVPLWNAMISAFSVHGMARNAF 416
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
F +M+ P TF +LL+ACA +E+G
Sbjct: 417 AVFVQMELLGILPDHITFVSLLSACARDGLVEEG 450
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 60/343 (17%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGG-----SWNAMLGAYTQNGFPGRTLELFLD 133
+ N I Y G ++DA GL M ++DG ++N +L + +NG + EL +
Sbjct: 113 MWNEMIAAYVNEGKVEDALGLLRSM-QKDGWKPDVITYNTILSGHARNGLKTQAFELLSE 171
Query: 134 MNHSGVSANQITYANVLRSSAEELELGV-------------------------------- 161
M G+ N +++ NVL S ++ L
Sbjct: 172 MVQMGLKPNVVSF-NVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPIT 230
Query: 162 ----------------SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
K++HG ++ GF N+ + S+LVD Y KC M A ++F I
Sbjct: 231 ITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRID 290
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N VSWN ++ Y+ +EA+ +F +ML E ++P + TF AC +++ G
Sbjct: 291 GRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRG 350
Query: 266 IHGVIIKIDF-EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+HG K E + + +L +MY KCG + DA+ + D E+++ W +++S +++ G
Sbjct: 351 LHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHG 410
Query: 325 RIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDF 363
R A +F +M + I++ ++L+ R L +E +
Sbjct: 411 MARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKY 453
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 141/324 (43%), Gaps = 26/324 (8%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P +F+ + ++ Y KC ++D A +F + R+ SWNA++ Y N P L+LFL+M
Sbjct: 261 PNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEM 320
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF--CGNVILESSLVDAYGKCM 192
G+ + IT+ + + + + + LHG K N I S+L+D Y KC
Sbjct: 321 LGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAI-ASALIDMYAKCG 379
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA+ +FD K+ WN ++ + V G + A +F +M I P + TF + L
Sbjct: 380 SILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLS 439
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-------- 304
AC+ +G+ G E V +L G L A GLLD+
Sbjct: 440 ACA-----RDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGA-GLLDEALDFIRQM 493
Query: 305 PDERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
P + W +++ + R A+ LF P+ N ++ + Y S +W A
Sbjct: 494 PYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPD-NATNYMLLSNIYVSSGMWDFA 552
Query: 361 LDFVFLMRK----TTKDIDQVTLG 380
+ MR T K+ +T+G
Sbjct: 553 KNLRSFMRGRKLLTIKECSYLTVG 576
>gi|255536747|ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549339|gb|EEF50827.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/584 (28%), Positives = 291/584 (49%), Gaps = 68/584 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+S S LFQ C +SKA +++ + ++ + + N I Y KC AR
Sbjct: 104 PISISYSNLLFQ-CTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARK 162
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+ DE E D SW+A++ Y+QNGF + F +M+ GV N+ T+ ++L++ +
Sbjct: 163 MVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTD 222
Query: 159 LGVSKQ--------------------------------LHGLIVKRGFCGNVILESSLVD 186
+ + +Q +HG ++K + ++ ++LVD
Sbjct: 223 MWLGRQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVD 282
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y K + +A R+F++I + VSWN I+ + A+ +F KM R + P FT
Sbjct: 283 MYAKVGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCPNMFT 342
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
++AL AC+ + G Q+H ++K+D D + L +MY KC + DAR L +
Sbjct: 343 ISSALKACAGMGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMP 402
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
ER++I W + ++G++ +G EA LF M KE + F
Sbjct: 403 ERDLIVWNAAITGHSQNGEDLEAVSLFPSM--------------------HKEGVGF--- 439
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+Q+TL +L A L + ++H ++ + + +V+N+L+D Y KCG
Sbjct: 440 --------NQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNYVANSLIDTYGKCGR 491
Query: 427 LRSA-RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLL 484
++ A RI +Q S D V++ +++T Y++ GQ EEA+ + EMQ + RP F +LL
Sbjct: 492 IKDATRI--FQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSSLL 549
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
ACAN+S+ EQGKQ+H V++ + ++ +LV +Y KC ++ A R F E ++
Sbjct: 550 NACANLSAYEQGKQVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSEIPERGIV 609
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
++MI GF + G+EAL++F M ++GI P+H+ + + AC
Sbjct: 610 SWSAMIGGFAQHGHGKEALQLFNRMLEDGIPPNHMYVYDVPSAC 653
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 250/531 (47%), Gaps = 66/531 (12%)
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
I+Y+N+L K++H ++K G + + + L++ Y KC AR+M D+
Sbjct: 107 ISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFFKYARKMVDE 166
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML--------------------------- 236
+ VSW+ ++ Y G GKEA+ F++M
Sbjct: 167 STEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEFTFPSLLKACTSTTDMWLG 226
Query: 237 RED-----IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
R+D IRP F+ + + AC+ L +G +IHG +IK+ ++ D +L +MY K
Sbjct: 227 RQDMILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAK 286
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
G LE+A + ++ + +I+SW +I++G A+ A ELF +M +
Sbjct: 287 VGTLEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNRSGMCP-------- 338
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ T+ L CAG+ ++G+++H + + D S+
Sbjct: 339 -----------------------NMFTISSALKACAGMGLKELGRQLHSSLLKMDIRSDS 375
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
F++ L+DMY KC + AR+ F M + RD + WNA +TG+++ G+ EA++ F M
Sbjct: 376 FLAVGLIDMYSKCDLMTDARLLFNLMPE-RDLIVWNAAITGHSQNGEDLEAVSLFPSMHK 434
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E ++ T T+L + A++ QIH +++ ++ + +L++ Y KC ++
Sbjct: 435 EGVGFNQITLSTVLKSVASLQVDHICSQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKD 494
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A R+F+ES +D++ SMI + + +G EAL+++ M+ I+PD +L AC +
Sbjct: 495 ATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACAN 554
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ Q + K+G I + ++ +Y + G + + + + +P
Sbjct: 555 LSAYEQGKQVHVHV-LKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSEIP 604
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 98/178 (55%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
++ N I+ YGKCG + DA +F E P D ++ +M+ AY+Q+G L+L+L+M
Sbjct: 477 YVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDR 536
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + +++L + A KQ+H ++K GF ++ +SLV+ Y KC + DA
Sbjct: 537 KIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDA 596
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
R F +I + VSW+ ++ + G+GKEA+ +F +ML + I P + + AC+
Sbjct: 597 DRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLFNRMLEDGIPPNHMYVYDVPSACN 654
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
+ +T+FS + + P ++ LL C + GK+IH VI+ + R L+
Sbjct: 89 HQNITTFSSSNFHSTPISISYSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLI 148
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y+KC +YA ++ ES+ D++ +++I G+ N G+EA+ F M G+K +
Sbjct: 149 NLYSKCQFFKYARKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEMHLLGVKCNEF 208
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
TF +L AC ++ L Q D + GI P CMI
Sbjct: 209 TFPSLLKACTSTTDMWLGRQ--DMILS--GIRPNEFSLSCMI 246
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/606 (27%), Positives = 297/606 (49%), Gaps = 46/606 (7%)
Query: 79 LLNRAIECYGKC-----GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
L N + Y C G +D R LFD P+R+ SWN ++G Y + G P LE+F+
Sbjct: 139 LRNSLLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMR 198
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKC 191
M G+ +++ NV ++A + + L+G+++K G + ++ + SS + + +
Sbjct: 199 MLEDGIRPTPVSFVNVFPAAASD-DPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEI 257
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-TFANA 250
+ AR +FD KN WN ++ Y+ G EA+ +F +++ PL+ TF +A
Sbjct: 258 GDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSA 317
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERN 309
+ A S G Q+HG ++K V+LG +L MY +CG
Sbjct: 318 ITAASQSQDGKLGQQLHGYLMKGMRSTLPVILGNALVVMYSRCGN--------------- 362
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ A +LF+++PE++++SWN M+ + ++ E L V+ M K
Sbjct: 363 ----------------VHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHK 406
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ D VTL +L+ + ++++GK+ HG++ R+ S L++MY K G++
Sbjct: 407 SGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESY-LINMYSKSGHIDM 465
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA 488
A+ F RD+V+WNA++ GY + GQ E+A+ +F M + P+ T ++L AC
Sbjct: 466 AQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACE 525
Query: 489 NIS-SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+ ++ GKQIH F +R+ + N+ ALV++Y+KC + A VF + +
Sbjct: 526 PVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYT 585
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI G + G AL +F M+ G+KPD +TF + AC + G V L + SM
Sbjct: 586 TMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMET- 644
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT-VPMLRKIFDKCRKNGYATLGE 666
+G+ +H+ C++ L + G ++E DFV + + + + + C+ G L
Sbjct: 645 FGLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCKAQGKQELTA 704
Query: 667 WAARRL 672
+ +L
Sbjct: 705 FVTDKL 710
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/575 (25%), Positives = 265/575 (46%), Gaps = 50/575 (8%)
Query: 89 KCGNLDDARGLFDEMPERDGGSW--NAMLGAYTQNGFPGRTLELFLDMNHSG---VSANQ 143
K G L+ AR L + R + N +L AY P L L+ +NH+ ++
Sbjct: 41 KQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDH 100
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDA---- 197
TY+ L + A L + + +H +++R +L +SL++ Y C
Sbjct: 101 YTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDV 160
Query: 198 -RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+FD +N VSWN +V Y+ G EA+ MF +ML + IRP +F N +F +
Sbjct: 161 VRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVN-VFPAAA 219
Query: 257 LSSPYEGMQIHGVIIK--IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
P ++G++IK +++ D V+ S M+ + G ++ AR + D ++NI W
Sbjct: 220 SDDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWN 279
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++++GY +G+ EA +L F+ +M +
Sbjct: 280 TMITGYVQNGQFSEAMDL------------------------------FIQIMGSKGVPL 309
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIW 433
D VT + + + K+G+++HG++ + S+ + + NAL+ MY +CGN+ +A
Sbjct: 310 DVVTFLSAITAASQSQDGKLGQQLHGYLMKGMRSTLPVILGNALVVMYSRCGNVHAAFDL 369
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F Q+ + +D VSWN ++T + + E + +M T +L+A +N
Sbjct: 370 FDQLPE-KDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGD 428
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMIL 551
L+ GKQ H ++IR+ E + L+ +Y+K ++ A RVF + D + N+MI
Sbjct: 429 LQIGKQSHGYLIRHGIEGEGL-ESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIA 487
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G+ + + +A+ F M + G++P +T +L AC G A + S ++ +
Sbjct: 488 GYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSLD 547
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ ++ +Y + G + E+ +RM TV
Sbjct: 548 TNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTV 582
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 146/270 (54%), Gaps = 3/270 (1%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T PV L N + Y +CGN+ A LFD++PE+D SWN M+ A+ QN F L L
Sbjct: 344 TLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQ 403
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M+ SG A+ +T VL +++ +L + KQ HG +++ G G LES L++ Y K
Sbjct: 404 MHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEG-LESYLINMYSKSGH 462
Query: 194 MTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ A+R+FD N ++ V+WN ++ Y +G ++AV+ F M+ + P + T A+ L
Sbjct: 463 IDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLP 522
Query: 253 ACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC + + G QIH ++ + + V +L +MY KCG + A + D+ E++ +
Sbjct: 523 ACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTV 582
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNV 341
++T+++SG G A LF M + +
Sbjct: 583 TYTTMISGLGQHGFGDRALFLFYSMQDNGL 612
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 281/588 (47%), Gaps = 77/588 (13%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
YA++L+ + L + Q+H +V G L S L++ Y + + DARRMFD +
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N SW I+ Y G+ +E + +F+ M+ E +RP +F F ACS L + G
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ ++ I FEG+ V GS+ +M++KCGR++ AR
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR-------------------------- 166
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
F E+ ++V WN M++GYT +K+AL+ M + +T+ ++
Sbjct: 167 -----RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSA 221
Query: 386 CAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C LS ++ G+E+HG+ I + S++ V N+L+D Y KC ++ AR F M ++ D V
Sbjct: 222 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLV 280
Query: 445 SWNAVL--TGYARRGQSEEAMTSFSEMQ----------------WETRPS---------- 476
SWNA+L TG+ + G + A+ F M W + S
Sbjct: 281 SWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVN 340
Query: 477 ----------------KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
T + L AC+ +++L QGK+IH F+IR + +L++
Sbjct: 341 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 400
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y +C ++ + R+F D++ N MI + + G +A+ +F + G+KP+HIT
Sbjct: 401 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHIT 460
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F +L AC H G ++ ++F M+ +Y + P +E Y CM+ L R G E +F+ +M
Sbjct: 461 FTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM 520
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
PF P + + CR + L E+AAR L EL P + + + N
Sbjct: 521 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMAN 568
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 256/467 (54%), Gaps = 15/467 (3%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+YA + Q C + ++ + LV FL +R +E Y + G ++DAR +FD+M
Sbjct: 12 IYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 71
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ER+ SW A++ Y G T++LF M + GV + + V ++ +E V K
Sbjct: 72 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 131
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++ ++ GF GN ++ S++D + KC M ARR F++I+ K+ WN++V Y G
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
K+A+ +F KM+ E ++P + T A+A+ AC+ LS G +IHG IK++ D+++G
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251
Query: 284 -SLTEMYVKCGRLEDARGLLDQPDERNIISWTSI--VSGYAISG----------RIREAR 330
SL + Y KC +E AR + +++SW ++ V+G+ G R+ A
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIAC 311
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F+E+ R+V+ WN++++ +S ALD + M + +++ VT+ L C+ L+
Sbjct: 312 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 371
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ GKE+H FI R + F+ N+L+DMY +CG+++ +R F M Q RD VSWN ++
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ-RDLVSWNVMI 430
Query: 451 TGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+ Y G +A+ F + + +P+ TF LL+AC++ +E+G
Sbjct: 431 SVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477
>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
Length = 734
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 186/711 (26%), Positives = 323/711 (45%), Gaps = 110/711 (15%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
++ + Q C + + +++ + ++ FY ++ + + Y KC +L+ + LF
Sbjct: 53 IFGEILQGCVYDRDLSTGKQIHARVLKNGEFYSRNE-YIETKLVVFYAKCDDLEISESLF 111
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+ R+ SW A++G ++ GF L F++M + +S + NV ++
Sbjct: 112 SRLRIRNVFSWAAIVGVRSRIGFSEDALTGFVEMLETEISPDNFVVPNVCKACGVLRWSR 171
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +HG ++K V + SSL D YGK + DAR++FD+I +N V+WN ++ Y+
Sbjct: 172 FGRSVHGFVMKSRLHDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYV 231
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +EA+ + M E I P T + L A + + EG Q H V I E D++
Sbjct: 232 QNGMNEEAIRLLSDMKEEGIEPTRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNI 291
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ SL Y K G +E A +F+ M ++
Sbjct: 292 LGTSLLNFYCKVGLIE-------------------------------YAEMVFDRMIGKD 320
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V++WN +++GY + L + A+D LMR D VTL +++V A ++K+GKEV
Sbjct: 321 VVTWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAARTRDLKLGKEVLC 380
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS- 459
+ R+ + S+I +++ +DMY +CG++ A+ F Q+ D + WNA+L Y G S
Sbjct: 381 YCIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQK-DLILWNALLAAYTESGHSG 439
Query: 460 ----------------------------------EEAMTSFSEMQ----------WET-- 473
EA FS+MQ W T
Sbjct: 440 EALRLFYEMQLQSVPPNVITRNLIMRSLLGNGQVSEAKEMFSQMQSSGIFPNLISWTTMM 499
Query: 474 ------------------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC-Y 508
RP+ + L+ACAN++SL G IH ++IRN +
Sbjct: 500 NGLVQNGCSEEAILFLRKMLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQH 559
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVF--KESSSLDVIICNSMILGFCHNERGREALEVF 566
+V+ +LV++Y KC + A RVF K S ++ + +MI + + +EA+ ++
Sbjct: 560 SSSVLVDTSLVDMYAKCGDINKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLY 619
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
+++ GI+PD T +L AC + G+ K A++ F M K+G+ P LEHY M++L
Sbjct: 620 RNLEEIGIEPDDKTITSLLSACKNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMVELLAS 679
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G +++ V MP+ P +++ + D C K L E+ ++ L P
Sbjct: 680 AGEVEKALRLVEEMPYKPDARVIQSLLDSCNKQHKTELMEYISKHLVVFEP 730
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 255/529 (48%), Gaps = 36/529 (6%)
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG- 173
+ + ++NG L L +M+ + + +L+ + +L KQ+H ++K G
Sbjct: 23 VSSLSKNGEINEALRLVTEMDFRNLRIGPEIFGEILQGCVYDRDLSTGKQIHARVLKNGE 82
Query: 174 -FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
+ N +E+ LV Y KC + + +F ++ +N SW IV G ++A+ F
Sbjct: 83 FYSRNEYIETKLVVFYAKCDDLEISESLFSRLRIRNVFSWAAIVGVRSRIGFSEDALTGF 142
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+ML +I P NF N AC L G +HG ++K V SL +MY K
Sbjct: 143 VEMLETEISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRLHDCVFVASSLADMYGK- 201
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
RG LD +AR++F+E+PERNV++WNAM+ GY
Sbjct: 202 ------RGFLD------------------------DARKVFDEIPERNVVAWNAMMVGYV 231
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
++ + +EA+ + M++ + +VT+ + L+ A + I+ GK+ H N +
Sbjct: 232 QNGMNEEAIRLLSDMKEEGIEPTRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNI 291
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
+ +LL+ Y K G + A + F +M + D V+WN +++GY ++G E A+ M+ E
Sbjct: 292 LGTSLLNFYCKVGLIEYAEMVFDRMIGK-DVVTWNLLISGYVQQGLVENAIDMCRLMRVE 350
Query: 473 T-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+ T TL++ A L+ GK++ C+ IR+ +E ++ V++Y +C + A
Sbjct: 351 NLKFDCVTLSTLMSVAARTRDLKLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDA 410
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+VF + D+I+ N+++ + + EAL +F M+ + + P+ IT + I+ + +
Sbjct: 411 KKVFDATVQKDLILWNALLAAYTESGHSGEALRLFYEMQLQSVPPNVITRNLIMRSLLGN 470
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
G V A + F M+ GI P L + M+ + G +E F+ +M
Sbjct: 471 GQVSEAKEMFSQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAILFLRKM 518
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 251/484 (51%), Gaps = 33/484 (6%)
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-L 285
+A+ + R IR + T A L C+ S G +H + + + L + L
Sbjct: 33 QAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHL 92
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY KCG A + D+ RN+ SW ++SGYA G+I+ AR+LF++MPE++V+SWN
Sbjct: 93 INMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWN 152
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M+ Y +S +AL F +R+ ++ + +LN+C + E+++ K+ HG +
Sbjct: 153 TMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVA 212
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------------- 440
+ SN+ +S+++LD Y KC + AR F +M R
Sbjct: 213 GFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELF 272
Query: 441 -----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
++ V+W +++ GYAR +A+ F++M RP +FTF + L A A+I+SL
Sbjct: 273 DLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLN 332
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNSMILGF 553
GKQIH ++IR N + +L+++Y+KC CLE VF DV++ N++I
Sbjct: 333 HGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSL 392
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ RG+EA+++F M + G+KPD IT +L AC H G V+ L+ ++S+ +G+IP
Sbjct: 393 AQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPN 452
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY C+I L R G+ L + + +MP P + + CR +G G A ++
Sbjct: 453 QEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKII 512
Query: 674 ELNP 677
EL+P
Sbjct: 513 ELDP 516
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 182/347 (52%), Gaps = 9/347 (2%)
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
++ Y K + AR++FD + K+ VSWN +V Y +G +A+ + ++ R I
Sbjct: 123 MLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYN 182
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
++FA L C + Q HG ++ F + V+ S+ + Y KC + DAR L D
Sbjct: 183 EYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFD 242
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ R++++WT++VSGYA G + ARELF+ MPE+N ++W +++AGY R L +AL+
Sbjct: 243 EMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALEL 302
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
M DQ T L A ++ + GK++HG++ R + N V ++L+DMY K
Sbjct: 303 FTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSK 362
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG L R+ F M + D V WN +++ A+ G+ +EA+ F +M + +P + T
Sbjct: 363 CGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIV 422
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
LL AC++ +++G ++ YE C G + C ++
Sbjct: 423 LLNACSHSGLVQEGLRL--------YESITSCHGVIPNQEHYACLID 461
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 241/528 (45%), Gaps = 111/528 (21%)
Query: 46 AHLFQLCASSKAIVEARKLESNL-VTFYPTPPVFLLNRAIECYGKCGN------------ 92
A+L Q CA++K++ + + +L VT P FL N I Y KCG+
Sbjct: 54 AYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMS 113
Query: 93 -------------------LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+ AR LFD+MPE+D SWN M+ AY ++GF L + +
Sbjct: 114 TRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRE 173
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
+ G+ N+ ++A +L + EL +SKQ HG ++ GF N+++ SS++DAY KC
Sbjct: 174 LRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSE 233
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRY--------------------------LVAGN--- 224
M DARR+FD++ ++ ++W +V Y L+AG
Sbjct: 234 MGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARH 293
Query: 225 --GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +A+ +F KM+ +IRP FTF++ L A + ++S G QIHG +I+ + + +V+
Sbjct: 294 DLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVV 353
Query: 283 GSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL +MY KCG LE R + D D+ +++ W +I+S A GR +EA ++F++M
Sbjct: 354 SSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDM----- 408
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV--- 398
+R K D++TL ++LN C+ ++ G +
Sbjct: 409 -------------------------VRLGMKP-DRITLIVLLNACSHSGLVQEGLRLYES 442
Query: 399 ----HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
HG I ++ + L+D+ + G+ + +M + + WNA+L
Sbjct: 443 ITSCHGVIPNQEHYA------CLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCR 496
Query: 455 RRGQSE---EAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI 499
G E E E+ ++ + ++ AA +E +Q+
Sbjct: 497 MHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQL 544
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 46/334 (13%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE-- 102
+A L +C K + +++ ++ + + + ++ Y KC + DAR LFDE
Sbjct: 186 FAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMI 245
Query: 103 -----------------------------MPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
MPE++ +W +++ Y ++ + LELF
Sbjct: 246 IRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTK 305
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M + +Q T+++ L +SA L KQ+HG +++ N I+ SSL+D Y KC
Sbjct: 306 MMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGC 365
Query: 194 MTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ R +FD + +K + V WN I+ G G+EA+ MF M+R ++P T L
Sbjct: 366 LEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLN 425
Query: 253 ACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ- 304
ACS EG+++ HGVI + L ++ + G + L++
Sbjct: 426 ACSHSGLVQEGLRLYESITSCHGVIPNQEH------YACLIDLLGRAGHFDTLMNQLEKM 479
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
P + N W +++ + G I RE+ ++ E
Sbjct: 480 PCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIE 513
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 307/640 (47%), Gaps = 57/640 (8%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+L+A + +SS A V ++L+TFY + P L A +F +
Sbjct: 33 ALHAWALKSGSSSHAPVS-----NSLITFYSSFPRLFLPAAF-------------AVFAD 74
Query: 103 MPE--RDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELEL 159
+P RD SWN++L + + P L F M + S + + ++A ++A
Sbjct: 75 IPAAARDVASWNSLLNPLSHHR-PLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSA 133
Query: 160 GVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+H L K NV + ++L++ Y K ++ DA+ +FD++ ++N VSW +V
Sbjct: 134 SAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAG 193
Query: 219 YLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y +EA +F +ML E + F L A S G+Q+HG+++K G
Sbjct: 194 YAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVG 253
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
V SL MY K G ++ A +F
Sbjct: 254 FVSVENSLVTMYAKAGCMD-------------------------------AAFHVFESSK 282
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
ERN I+W+AM+ GY+++ + A+ M + TL +LN C+ + + GK+
Sbjct: 283 ERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQ 342
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
HG + + + ++V +AL+DMY KCG + A+ F Q S+ D V W A++TG+ + G
Sbjct: 343 AHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSEL-DIVLWTAMVTGHVQNG 401
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ E+A+ ++ M E P+ T +LL ACA +++LE GKQ+H +++ + +
Sbjct: 402 EFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGS 461
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL +Y+KC LE + VF+ DVI NS+I GF N RG +A+ +F MK EG P
Sbjct: 462 ALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAP 521
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +TF +L AC H G V +F SM YG+ P+L+HY CM+ + R G + E +DF
Sbjct: 522 DPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDF 581
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ + + + R + CR +G +A +L +L
Sbjct: 582 IESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLG 621
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H P ++L + C+ ++E ++ +V V++ + ++ Y KCG
Sbjct: 313 HAAGFPPTEFTLVG-VLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGC 371
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ DA+ F++ E D W AM+ + QNG + L L+ M+ GV N +T ++LR+
Sbjct: 372 IGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRA 431
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
A L KQLH I+K GF + S+L Y KC + D +F + +++ ++W
Sbjct: 432 CAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAW 491
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
N I+ + G G +A+ +F +M E P TF N L ACS +
Sbjct: 492 NSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHM 536
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 317/636 (49%), Gaps = 49/636 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF+ C + ++ A+ L + LV V + + + Y GN+ AR FD + RD
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRD 116
Query: 108 GGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+WN M+ Y + G+ + F L M SG+ + T+ +VL++ + ++H
Sbjct: 117 VYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIH 173
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
L +K GF +V + +SL+ Y + + +AR +FD++ ++ SWN ++ Y +GN K
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAK 233
Query: 227 EAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ L + +R ++ T + L AC+ G+ IH IK E + V L
Sbjct: 234 EALT-----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
++Y + G L+D + ++F+ M R++ISWN
Sbjct: 289 IDLYAEFGSLKDCQ-------------------------------KVFDRMYVRDLISWN 317
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+++ Y + A+ MR + D +TL + ++ + L EI+ + V GF R
Sbjct: 318 SIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRK 377
Query: 406 D-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ +I + NA++ MY K G + SAR F + + D +SWN +++GYA+ G + EA+
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNK-DVISWNTIISGYAQNGFASEAIE 436
Query: 465 SFSEMQ---WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
++ M+ E ++ T+ ++L AC+ +L QG ++H +++N ++V +L ++
Sbjct: 437 MYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADM 496
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC L+ A+ +F + ++ + N++I + G +A+ +F M EG+KPDHITF
Sbjct: 497 YGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 556
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V F+ M+ YGI P L+HY CM+ LY R G ++ +F+ MP
Sbjct: 557 VTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMP 616
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR +G LG+ A+ L E+ P
Sbjct: 617 LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 652
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 255/559 (45%), Gaps = 49/559 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S Y + + + C + + + K+ + F V++ I Y + G +
Sbjct: 145 LSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAV 201
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRS 152
+AR LFDEMP RD GSWNAM+ Y Q+G L L G+ A + +T ++L +
Sbjct: 202 VNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSA 256
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
E + +H +K G + + + L+D Y + + D +++FD + ++ +SW
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISW 316
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N I++ Y + A+++F +M I+P T + S L + G ++
Sbjct: 317 NSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLR 376
Query: 273 IDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ +D+ +G ++ MY K G ++ AR + + +++ISW +I+SGYA +G EA E
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIE 436
Query: 332 LFNEMPER-NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
++N M E IS N Q T +L C+
Sbjct: 437 MYNIMEEEGGEISAN------------------------------QGTWVSVLPACSQAG 466
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ G ++HG + +N ++FV +L DMY KCG L A FYQ+ R + V WN ++
Sbjct: 467 ALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLI 525
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCY 508
+ G E+A+ F EM E +P TF TLL+AC++ +++G+ CF +++ Y
Sbjct: 526 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEW--CFEMMQTDY 583
Query: 509 EINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
I + G +V++Y + LE A+ K +L C G L
Sbjct: 584 GITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSAC-RVHGNVDLGKI 642
Query: 567 GLMKKEGIKPDHITFHGIL 585
++P+H+ +H +L
Sbjct: 643 ASEHLFEVEPEHVGYHVLL 661
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 207/462 (44%), Gaps = 41/462 (8%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+S L++ + V+ L C + + S + +F+ N+ I+ Y
Sbjct: 237 TLSDGLRAMDSVTV---VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+ G+L D + +FD M RD SWN+++ AY N P R + LF +M S + + +T +
Sbjct: 294 EFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLIS 353
Query: 149 VLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+ ++ E+ + + G +++G F ++ + +++V Y K ++ AR +F+ + NK
Sbjct: 354 LASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNK 413
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQ 265
+ +SWN I+ Y G EA+ M+ M E +I T+ + L ACS + +GM+
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMK 473
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG ++K D V SL +MY KCGRL+DA L Q N + W ++++ + G
Sbjct: 474 LHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGH 533
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A LF EM + V D +T +L+
Sbjct: 534 GEKAVMLFKEMLDEGV-------------------------------KPDHITFVTLLSA 562
Query: 386 CAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C+ + G+ + + DY + ++ ++D+Y + G L A + M + D
Sbjct: 563 CSHSGLVDEGEWCFEMM-QTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDA 621
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
W A+L+ G + + SE +E P + LL+
Sbjct: 622 SIWGALLSACRVHGNVDLGKIA-SEHLFEVEPEHVGYHVLLS 662
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 164/339 (48%), Gaps = 32/339 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-- 138
N + Y K G +D AR +F+ +P +D SWN ++ Y QNGF +E++ M G
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGE 447
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+SANQ T+ +VL + ++ L +LHG ++K G +V + +SL D YGKC + DA
Sbjct: 448 ISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDAL 507
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+F I N+V WN ++ + G+G++AV++F +ML E ++P + TF L ACS
Sbjct: 508 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 567
Query: 259 SPYEG------MQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNI 310
EG MQ +G+ + G + ++Y + G+LE A + P + +
Sbjct: 568 LVDEGEWCFEMMQTDYGITPSLKH------YGCMVDLYGRAGQLEIALNFIKSMPLQPDA 621
Query: 311 ISWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
W +++S + G + + LF PE + ++ +L+ S E +D
Sbjct: 622 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEH--VGYHVLLSNMYASAGKWEGVD---- 675
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+I +T G L G S +++ +V F N
Sbjct: 676 ------EIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGN 708
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+K+ID V + C L K +H + ++ N+ +S L+++Y GN+ A
Sbjct: 51 SKEIDDVHT--LFRYCTNLQSAKC---LHARLVVSNAIQNVCISAKLVNLYCYLGNVALA 105
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACA 488
R F + RD +WN +++GY R G S E + FS + +P TF ++L AC
Sbjct: 106 RYTFDHI-HNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACR 164
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
N++ G +IHC ++ + +V +L+ +Y + + A +F E + D+ N+
Sbjct: 165 NVT---DGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNA 221
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKP-DHITFHGILLACIHEGNVKLALQFFDSMRCK 607
MI G+C + +EAL + +G++ D +T +L AC G+ + S K
Sbjct: 222 MISGYCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIK 275
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+G+ +L +I LY +G +K+ + +RM
Sbjct: 276 HGLESELFVSNKLIDLYAEFGSLKDCQKVFDRM 308
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 481 ETLLAACANISSLEQGKQIHC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
TL C N L+ K +H V+ N + NV LV +Y + A F
Sbjct: 58 HTLFRYCTN---LQSAKCLHARLVVSNAIQ-NVCISAKLVNLYCYLGNVALARYTFDHIH 113
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGL-MKKEGIKPDHITFHGILLAC--IHEGNVKL 596
+ DV N MI G+ E + F L M G++PD+ TF +L AC + +GN
Sbjct: 114 NRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIH 173
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L K+G + + +I LYCRYG + + MP
Sbjct: 174 CLAL------KFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMP 212
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 271/550 (49%), Gaps = 66/550 (12%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMV--MTDARRMFDDIQNKNAVSWNVIVRRYL 220
KQ+H +++ G + S L+ A + A+++FD I + N +WN ++R Y
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 221 VAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ N +++++F +ML + P FTF + A S L + G HG++IK+ D
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
+L SL Y KCG L GL GY + F +P R
Sbjct: 172 FILNSLIHFYAKCGEL----GL-----------------GYRV----------FVNIPRR 200
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V+SWN+M+ + + +EAL+ M + +T+ +L+ CA S+ + G+ VH
Sbjct: 201 DVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVH 260
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------- 440
+I RN ++ +SNA+LDMY KCG++ A+ F +M ++
Sbjct: 261 SYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYD 320
Query: 441 -----------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAAC 487
+D +WNA+++ Y + G+ +EA+ F E+Q +P + T + L+AC
Sbjct: 321 AAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSAC 380
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
A + +++ G IH ++ + ++N +L+++Y KC L+ A+ VF DV + +
Sbjct: 381 AQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWS 440
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MI G + G++A+ +F M+++ +KP+ +TF IL AC H G V+ FF+ M
Sbjct: 441 AMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELV 500
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
YG++P ++HY CM+ + R G ++E + + +MP P + + C + L E
Sbjct: 501 YGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQ 560
Query: 668 AARRLNELNP 677
A +L EL P
Sbjct: 561 ACSQLIELEP 570
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 264/489 (53%), Gaps = 16/489 (3%)
Query: 14 SKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAI--VEARKLESNLVTF 71
S S P P P+ S L +D + L C+ +K + + A+ L + L F
Sbjct: 14 SHSLPTPNPN-------SITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLF-F 65
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
P L+ A +LD A+ +FD++P + +WN ++ AY + P ++L +F
Sbjct: 66 DPFSASRLITAA--ALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIF 123
Query: 132 LDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
L M H ++ T+ ++++++E EL K HG+++K +V + +SL+ Y K
Sbjct: 124 LRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAK 183
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + R+F +I ++ VSWN ++ ++ G +EA+ +F +M ++++P T
Sbjct: 184 CGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGV 243
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC+ S G +H I + + ++ +MY KCG +EDA+ L D+ E++I
Sbjct: 244 LSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDI 303
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRK 369
+SWT+++ GYA G A+ +F+ MP +++ +WNA+++ Y + KEAL+ F L
Sbjct: 304 VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLS 363
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
T D+VTL L+ CA L + +G +H +I + N ++ +L+DMY KCG+L+
Sbjct: 364 KTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQK 423
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A + F+ + +R+D W+A++ G A G ++A+ FS+MQ + +P+ TF +L AC+
Sbjct: 424 ALMVFHSV-ERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACS 482
Query: 489 NISSLEQGK 497
++ +E+G+
Sbjct: 483 HVGLVEEGR 491
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 278/547 (50%), Gaps = 38/547 (6%)
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
D N S ++ YA+++ S + L Q++ ++ G L + LV+
Sbjct: 66 DCNESTFKPDKF-YASLIDDSIHKTHL---NQIYAKLLVTGLQYGGFLIAKLVNKASNIG 121
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ AR++FD + + WN IVR Y G A+ M+ +M + P F+F L
Sbjct: 122 EVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLK 181
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS L + G ++HG I + FE D V L +Y KCG + A + + +R I+S
Sbjct: 182 ACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVS 241
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
WTSI+SGYA +G+ EA +F+E MRKT
Sbjct: 242 WTSIISGYAQNGQPIEALRIFSE-------------------------------MRKTNV 270
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D + L +L + +++ GK +HG + + + +L +Y KCG++ AR+
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANIS 491
+F Q+ + + WNA+++GY + G +EEA+ F M+ + RP T + +AACA I
Sbjct: 331 FFNQV-ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIG 389
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
SLE + + ++ + + +V+ +L++ Y KC ++ A VF DV++ ++M++
Sbjct: 390 SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G+ + +GRE++ +F M++ G+ P+ +TF G+L AC + G V+ F MR YGI
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIE 508
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P+ +HY C++ L R G++ +FV MP P V + + C+ + + TLGE+AA R
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAER 568
Query: 672 LNELNPW 678
L L+P+
Sbjct: 569 LFSLDPY 575
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 212/420 (50%), Gaps = 33/420 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
FL+ + + G + AR LFD+ P+ D WNA++ Y+++GF G +E++ M +
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
VS + ++ VL++ + L + +++HG I + GF +V +++ LV Y KC + A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F + ++ VSW I+ Y G EA+ +F +M + ++RP + L A + +
Sbjct: 228 NAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDV 287
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G IHG +IK+ E + +L SLT +Y KCG + AR +Q + ++I W +++
Sbjct: 288 EDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMI 347
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGY +G EA ELF M +N+ D +
Sbjct: 348 SGYVKNGYAEEAIELFRLMKSKNIRP-------------------------------DSI 376
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ + CA + +++ + + +I +++ +++ V+ +L+D Y KCG++ AR F ++
Sbjct: 377 TVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRI 436
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+D V W+A++ GY GQ E++ F M Q P+ TF LL AC N +E+G
Sbjct: 437 PD-KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEG 495
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 164/325 (50%), Gaps = 4/325 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C++ A+ R++ + VF+ N + Y KCG + A +F + +R
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRT 238
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW +++ Y QNG P L +F +M + V + I +VLR+ + +L K +HG
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++K G L SL Y KC + AR F+ ++N + + WN ++ Y+ G +E
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F M ++IRP + T +++ AC+ + S + I +F D +V SL +
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLID 418
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----IS 343
Y KCG ++ AR + D+ +++++ W++++ GY + G+ RE+ LF+ M + V ++
Sbjct: 419 TYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVT 478
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMR 368
+ +L S L +E D MR
Sbjct: 479 FVGLLTACKNSGLVEEGWDLFHRMR 503
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 178/641 (27%), Positives = 287/641 (44%), Gaps = 43/641 (6%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA+ A + R++ + ++ T +LN A Y KC + DA +F +P +D
Sbjct: 317 VLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKD 376
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL---GVSK- 163
SWNA++ AY + G + L M G + IT+ +L S ++ L G SK
Sbjct: 377 AVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKS 436
Query: 164 -----QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
Q+H ++ G G+ L + LV YG+C + DAR F I +N SW +++
Sbjct: 437 LTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISL 496
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ G E + + M E TF + L ACS G IH I E D
Sbjct: 497 LVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESD 556
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L MY C L+ EAR +F M
Sbjct: 557 IITSNALLNMYTTCESLD-------------------------------EARLVFERMVF 585
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+V+SW +++ Y + EAL M + D VTL +L CA L + GK +
Sbjct: 586 RDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAI 645
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H I + +++FV A++ Y KC + AR F ++ + D V WNA++ YA+
Sbjct: 646 HERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDK-DIVCWNAMIGAYAQNHC 704
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
E+A + EM + + P+ T TLL +C++ +E+G +H Y + A
Sbjct: 705 EEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNA 764
Query: 518 LVEVYTKCCC-LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+ +Y KCC LE A F+ +S +V+ +S++ + N A +F M ++G+ P
Sbjct: 765 LINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLP 824
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+ +TF +L AC H G +F SM+ + + P EHY CM+ L + G +K+ F
Sbjct: 825 NIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASF 884
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++ MP P R + C + G AA++L + P
Sbjct: 885 MSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEP 925
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 161/605 (26%), Positives = 268/605 (44%), Gaps = 45/605 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA+ ++ +++ + +++ V L N + YGKCG++++AR FD MPERD SW
Sbjct: 20 CAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISW 79
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAM+ Y Q+ + ++L+ G +++T+A++L + +L + LH +
Sbjct: 80 NAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLG 139
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
F + I+ + L+ Y C + DA +F+ + +W ++ Y G + A
Sbjct: 140 TSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFAT 199
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ KM +E +R TF L CS L G +H + + + + SL MY K
Sbjct: 200 WSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGK 259
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
C R PD EARE+F + +VISW+A +A Y
Sbjct: 260 CSR---------HPD---------------------EAREVFLRISRPSVISWSAFIAAY 289
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ W EA+ LM + TL +L CA + + G+ +H + Y+ N
Sbjct: 290 GQH--W-EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNT 346
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V NA +Y KC + A F + +D VSWNA+++ YA++G +A+ +MQ
Sbjct: 347 TVLNAAASLYAKCSRVADASRVFSSIPC-KDAVSWNAIVSAYAKQGLFRDAIFLSRQMQV 405
Query: 472 ET-RPSKFTFETLLAACA---------NISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
E P TF T+L +C+ N SL G+Q+H +I N + + LV++
Sbjct: 406 EGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQM 465
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y +C L+ A F+ +V +I N E LE+ M EG + + ITF
Sbjct: 466 YGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITF 525
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC G++ L + +R K G+ + ++ +Y + E RM
Sbjct: 526 ISLLGACSVTGDLSLGKTIHERIRTK-GLESDIITSNALLNMYTTCESLDEARLVFERMV 584
Query: 642 FNPTV 646
F V
Sbjct: 585 FRDVV 589
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 256/548 (46%), Gaps = 32/548 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L C +S + R L + + + N I Y CG+LDDA +F+
Sbjct: 114 FASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSF 173
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVS 162
D +W ++ AYT++G + M+ G+ +N+IT+ VL SS E LE G
Sbjct: 174 RPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETG-- 231
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-ARRMFDDIQNKNAVSWNVIVRRYLV 221
K +H L + G ++ +E+SL+ YGKC D AR +F I + +SW+ + Y
Sbjct: 232 KHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY-- 289
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G EA+ F M E ++P T + L AC+ + + +G +IH +++ + + V
Sbjct: 290 -GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTV 348
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L + +Y KC R+ DA + ++ +SW +IVS YA G R+A L +M
Sbjct: 349 LNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGF 408
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ + + F+ ++ ++ +L + G++VH
Sbjct: 409 V---------------PDDITFITILYSCSQSA-------LLKQYGNSKSLTDGRQVHSQ 446
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ N + ++ N L+ MY +CG+L AR F + Q R+ SW +++ + G++ E
Sbjct: 447 MISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQ-RNVFSWTILISLLVQNGEASE 505
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ M E T +K TF +LL AC+ L GK IH + E +++ AL+
Sbjct: 506 GLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLN 565
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+YT C L+ A VF+ DV+ +I + H EAL+++ M++E +PD +T
Sbjct: 566 MYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVT 625
Query: 581 FHGILLAC 588
+L AC
Sbjct: 626 LISVLEAC 633
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 220/465 (47%), Gaps = 39/465 (8%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M+ GV ++IT N + + A + KQ+H I+ G +V+L +SLV YGKC
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ +AR FD + ++ +SWN ++ Y GK+A+ ++ E +P TFA+ L A
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 254 CSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
C F S + G +H + F D +V L MY CG L+DA + + ++ +
Sbjct: 121 C-FASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCT 179
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
WT++++ Y G++ A +++M + + S
Sbjct: 180 WTTVIAAYTRHGKLECAFATWSKMHQEGLRS----------------------------- 210
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG-NLRSAR 431
+++T +L+ C+ L ++ GK VH + ++ + N+L+ MY KC + AR
Sbjct: 211 --NEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAR 268
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F ++S R +SW+A + Y GQ EA+ +F M E +P+ T ++L ACA +
Sbjct: 269 EVFLRIS-RPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATV 324
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+ EQG++IH V+ Y N A +Y KC + A RVF D + N+++
Sbjct: 325 GAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIV 384
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ R+A+ + M+ EG PD ITF IL +C +K
Sbjct: 385 SAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLK 429
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 262/535 (48%), Gaps = 34/535 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+ ++L+ A +L + +H + RG + ++L + Y KC DARR+FD +
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEG 263
++ V+WN +V Y G + AV M +M ED RP T + L AC+ +
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
++H ++ F+ V ++ ++Y KCG ++
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVD--------------------------- 379
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
AR++F+ M +RN +SWNAM+ GY + EAL M D+ V++ L
Sbjct: 380 ----SARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
+ C L + G+ VH + R SN+ V NAL+ MY KC A F ++ + +
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYK-TR 494
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWNA++ G + G SE+A+ FS MQ E +P FT +++ A A+IS Q + IH +
Sbjct: 495 VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGY 554
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
IR + +V AL+++Y KC + A +F + VI N+MI G+ + G+ A
Sbjct: 555 SIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVA 614
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+E+F MK G P+ TF +L AC H G V ++F SM+ YG+ P +EHY M+
Sbjct: 615 VELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVD 674
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G + E F+ +MP P + + + C+ + L E +A+R+ EL P
Sbjct: 675 LLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEP 729
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 227/456 (49%), Gaps = 34/456 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L +LCA+ + R + + L +P Y KC DAR +FD MP
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMP 287
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSK 163
RD +WNA++ Y +NG + + + M G + +T +VL + A+ LG +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H V+ GF V + ++++D Y KC + AR++FD +Q++N+VSWN +++ Y G
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ EA+ +F +M+ E + + + AL AC L EG ++H ++++I E + V+
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L MY KC R + A + D+ + +SW +++ G +G +A LF+ M NV
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENV-- 525
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
D TL I+ A +S+ + +HG+
Sbjct: 526 -----------------------------KPDSFTLVSIIPALADISDPLQARWIHGYSI 556
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R +++V AL+DMY KCG + AR F ++ R ++WNA++ GY G + A+
Sbjct: 557 RLHLDQDVYVLTALIDMYAKCGRVSIARSLF-NSARDRHVITWNAMIHGYGSHGSGKVAV 615
Query: 464 TSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQ 498
F EM+ + P++ TF ++L+AC++ +++G++
Sbjct: 616 ELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 205/437 (46%), Gaps = 37/437 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA ++A+ R++ + V V + ++ Y KCG +D AR +FD M +R+ SW
Sbjct: 337 CADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSW 396
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAM+ Y +NG L LF M GV ++ L + E L +++H L+V+
Sbjct: 397 NAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVR 456
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G NV + ++L+ Y KC A ++FD++ K VSWN ++ G+ ++AV +
Sbjct: 457 IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRL 516
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M E+++P +FT + + A + +S P + IHG I++ + D VL +L +MY K
Sbjct: 517 FSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 576
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CGR+ AR L + +R++I+W +++ GY G + A ELF E
Sbjct: 577 CGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEE---------------- 620
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
M+ + K ++ T +L+ C+ + G+E + + DY
Sbjct: 621 ---------------MKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSM-KEDYGLEP 664
Query: 412 FVSN--ALLDMYRKCGNLRSARIW-FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ + ++D+ + G L A W F Q +S + G + ++ E ++
Sbjct: 665 GMEHYGTMVDLLGRAGKLHEA--WSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQ 722
Query: 469 MQWETRPSKFTFETLLA 485
+E P + + LLA
Sbjct: 723 RIFELEPEEGVYHVLLA 739
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 32/347 (9%)
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P+ TF + L C+ + G +H + + + +L MY KC R DAR +
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D+ R+ ++W ++V+GYA +G A + M E +
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEED--------------------- 321
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ D VTL +L CA + +EVH F R + + VS A+LD+Y
Sbjct: 322 ---------GERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVY 372
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG + SAR F M Q R+ VSWNA++ GYA G + EA+ F M E + +
Sbjct: 373 CKCGAVDSARKVFDGM-QDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSV 431
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
L AC + L++G+++H ++R E NV AL+ +Y KC + A +VF E
Sbjct: 432 LAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGY 491
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+ N+MILG N +A+ +F M+ E +KPD T I+ A
Sbjct: 492 KTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPA 538
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 198/731 (27%), Positives = 327/731 (44%), Gaps = 87/731 (11%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHLKS-----DEPVSYSLYAHL---------FQLCASSKA 57
+ SK+ PKPT T + L+S D + S Y + F A KA
Sbjct: 42 LTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKA 101
Query: 58 IVEARKLESN------LVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
+ + L++ V F Y + V + N + YGKCG + D +FD + +RD S
Sbjct: 102 VSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVS 161
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-----EELELGVSKQL 165
WN+ + A + + LE F M + + T +V + + L LG KQL
Sbjct: 162 WNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG--KQL 219
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG ++ G ++L+ Y K + D++ +F+ +++ VSWN ++ + +
Sbjct: 220 HGYSLRVGD-QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRF 278
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLGS 284
EA+ F M+ E + T A+ L ACS L G +IH +++ D + V +
Sbjct: 279 SEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSA 338
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY C ++E R +F+ + R + W
Sbjct: 339 LVDMYCNCRQVESGR-------------------------------RVFDHILGRRIELW 367
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
NAM++GY R+ L ++AL M K + + T+ ++ C + +HG+
Sbjct: 368 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAV 427
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + + +V NAL+DMY + G + + F M + RD+VSWN ++TGY G+ A+
Sbjct: 428 KLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM-EVRDRVSWNTMITGYVLSGRYSNAL 486
Query: 464 TSFSEMQ------------------WETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
EMQ +P+ T T+L CA ++++ +GK+IH + IR
Sbjct: 487 VLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIR 546
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
N ++ ALV++Y KC CL + RVF E + +VI N +I+ + +G EALE+
Sbjct: 547 NMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALEL 606
Query: 566 FGLMKKEG-----IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
F M E KP+ +TF + AC H G + L F M+ +G+ P +HY C+
Sbjct: 607 FKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV 666
Query: 621 IKLYCRYGYMKELEDFVNRMPFN-PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
+ L R G ++E + VN MP V + CR + LGE AA+ L L P
Sbjct: 667 VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNV 726
Query: 680 PFQFKITTNRF 690
+ + +N +
Sbjct: 727 ASHYVLLSNIY 737
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 274/576 (47%), Gaps = 50/576 (8%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI---QNKNAVSWNVIVRR 218
++QLH +V L + L+ Y + ++ AR++FD I + + WN I+R
Sbjct: 47 ARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRA 106
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ G + A+ ++ +M + P FT + ACS L S Y +H +++ F
Sbjct: 107 NVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNH 166
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP- 337
V+ L MY K GR+EDAR L D R+I+SW ++VSGYA++ A +F M
Sbjct: 167 LHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMEL 226
Query: 338 ---ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ N ++W ++L+ + R L+ E L+ +MR +I L ++L+VCA ++E+
Sbjct: 227 EGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDW 286
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GKE+HG++ + Y +FV NAL+ Y K ++ A F ++ + ++ VSWNA+++ YA
Sbjct: 287 GKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEI-KNKNLVSWNALISSYA 345
Query: 455 RRGQSEEAMTSFSEMQ----------------WETRPSKF-------------------- 478
G +EA +F M+ W S F
Sbjct: 346 ESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAK 405
Query: 479 ------TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
T ++L+ CA +++L G+++H + IRN N++ L+ +Y KC +
Sbjct: 406 VMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGH 465
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
VF D+I NS+I G+ + G AL F M + +KPD+ITF IL AC H G
Sbjct: 466 LVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAG 525
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
V FD M ++ I P +EHY CM+ L R G +KE D V MP P + +
Sbjct: 526 LVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGAL 585
Query: 653 FDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ CR + E A ++ L F + +N
Sbjct: 586 LNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSN 621
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 252/516 (48%), Gaps = 55/516 (10%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H+ +DE + YS +A FQ C + + +AR+L S LV FL R I Y +
Sbjct: 24 HVHNDELI-YSFHA-FFQRCFT---LQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAF 78
Query: 93 LDDARGLFDEMPERDGGS---WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
L AR +FD +P WN+++ A +G+ LEL+++M G + T V
Sbjct: 79 LSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLV 138
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+R+ + + + +H ++ GF ++ + + LV YGK M DAR++FD + ++
Sbjct: 139 IRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSI 198
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF---------------------- 247
VSWN +V Y + + A +F +M E ++P + T+
Sbjct: 199 VSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKV 258
Query: 248 -------------ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
A L C+ ++ G +IHG ++K +E V +L Y K
Sbjct: 259 MRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQH 318
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----------NVISW 344
+ DA + + +N++SW +++S YA SG EA F M + NVISW
Sbjct: 319 MGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISW 378
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
+A+++G+ +++L+ M+ + VT+ +L+VCA L+ + +G+E+HG+ R
Sbjct: 379 SAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIR 438
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N S NI V N L++MY KCG+ + + F + + RD +SWN+++ GY G E A+
Sbjct: 439 NMMSDNILVGNGLINMYMKCGDFKEGHLVFDNI-EGRDLISWNSLIGGYGMHGLGENALR 497
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+F+EM + +P TF +L+AC++ + G+ +
Sbjct: 498 TFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNL 533
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 82/350 (23%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + +CA + +++ +V +F+ N I YGK ++ DA +F E+
Sbjct: 272 AVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKN 331
Query: 106 RDGGSWNAMLGAYTQNG--------------------------------------FPGR- 126
++ SWNA++ +Y ++G + GR
Sbjct: 332 KNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRG 391
Query: 127 --TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
+LELF M + V AN +T ++VL AE L + ++LHG ++ N+++ + L
Sbjct: 392 EKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGL 451
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++ Y KC + +FD+I+ ++ +SWN ++ Y + G G+ A+ F +M+R ++P N
Sbjct: 452 INMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDN 511
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
TF L ACS G + R L DQ
Sbjct: 512 ITFVAILSACS-----------------------------------HAGLVAAGRNLFDQ 536
Query: 305 -----PDERNIISWTSIVSGYAISGRIREARELFNEMP-ERNVISWNAML 348
E N+ + +V +G ++EA ++ MP E N W A+L
Sbjct: 537 MVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALL 586
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/628 (27%), Positives = 308/628 (49%), Gaps = 51/628 (8%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAML 115
+ +V R + + ++ + N + Y KCG L A +F+ + +D SWN+++
Sbjct: 30 RNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLI 89
Query: 116 GAYTQNGFPGRT---LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
Y+QNG + ++LF +M + N T A + ++ + V +Q H L+VK
Sbjct: 90 TGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKM 149
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
G++ +++SLV Y K + + ++ ++RR L ++ + F
Sbjct: 150 SSFGDIYVDTSLVGMYCKAGL----KYLYMVYYGFWLCYKKDVLRRQL------KSSICF 199
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMYV 290
+ +E ++ F L S ++ Y G+ QIHG+ +K G + +L MY
Sbjct: 200 LEE-KEKESDSDYVFTAVL--SSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYS 256
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KC L EA ++F+ +RN I+W+AM+ G
Sbjct: 257 KCESL-------------------------------NEACKMFDSSGDRNSITWSAMVTG 285
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y+++ EA+ M + T+ +LN C+ + + GK++H F+ + + +
Sbjct: 286 YSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERH 345
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+F + AL+DMY K G L AR F + Q RD W ++++GY + +EEA+ + M+
Sbjct: 346 LFATTALVDMYAKAGCLADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALILYRRMK 404
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
P+ T ++L AC+++++LE GKQ+H I++ + + V AL +YTKC LE
Sbjct: 405 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLE 464
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
VF+ + + DV+ N+MI G HN +G EALE+F M EG +PD +TF I+ AC
Sbjct: 465 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACS 524
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H+G V+ +F M ++G+ P+++HY CM+ + R G +KE ++F+ + + +
Sbjct: 525 HKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLW 584
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELNP 677
R + C+ +G LG +A +L L
Sbjct: 585 RILLSACKNHGNCELGVYAGEKLMSLGS 612
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y++ + C+ +VE ++L S L+ +F ++ Y K G L DAR
Sbjct: 308 KPSEYTIVG-VLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 366
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAE 155
FD + ERD W +++ Y QN L L+ M +G+ N T A+VL+ SS
Sbjct: 367 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 426
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LELG KQ+HG +K GF V + S+L Y KC + D +F NK+ VSWN +
Sbjct: 427 TLELG--KQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAM 484
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+ G G EA+ +F +ML E P + TF N + ACS
Sbjct: 485 ISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACS 524
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 261/498 (52%), Gaps = 36/498 (7%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACS 255
A F +I + S+NV++R A N + F+ ++ ++P N T+ ACS
Sbjct: 79 ASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACS 138
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L + G H +I+ + D V SL MY +CG+
Sbjct: 139 NLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGK--------------------- 177
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+ +AR++F+E+ +++++SWN+M++GY++ EA+ M + +
Sbjct: 178 ----------MGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPN 227
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+++L +L C L ++K+G V F+ N + N F+ +AL+ MY KCG+L SAR F
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
M +++DKV+WNA++TGYA+ G SEEA+ F +M+ T P + T +L+ACA+I +L+
Sbjct: 288 SM-KKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GKQ+ + ++ +V ALV++Y KC L+ A RVF + + + N+MI
Sbjct: 347 LGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALA 406
Query: 555 HNERGREALEVFGLMKKEG--IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + +EAL +F M EG + P+ ITF G+L AC+H G V + F M +G++P
Sbjct: 407 FHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVP 466
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
++EHY CM+ L+ R G+++E DFV MP P +L + C+K + E + L
Sbjct: 467 KIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLL 526
Query: 673 NELNPWAPFQFKITTNRF 690
EL P + I++ +
Sbjct: 527 LELEPSNSGNYVISSKLY 544
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 234/494 (47%), Gaps = 63/494 (12%)
Query: 13 LSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFY 72
L K KP P++ + +S S L Q C S K + +++ + L+T
Sbjct: 17 LQKPHSKPNPNR---QALSDKFNS-----------LLQQCLSIKQL---KQIHAQLLTNS 59
Query: 73 PTPPVFLLNRAIECYGKCGNLDD---ARGLFDEMPERDGGSWNAML-GAYTQNGFPGRTL 128
P L K +L D A F + + S+N M+ G T L
Sbjct: 60 IHKPNSFLY-------KIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLAL 112
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
E + M G+ N +TY + + + L + + H +++RG + + SL+ Y
Sbjct: 113 EFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMY 172
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
+C M DAR++FD+I K+ VSWN ++ Y + EAV +F +M+ +P +
Sbjct: 173 ARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLV 232
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+ L AC L D+ LG+ E +V +E+ L
Sbjct: 233 SVLGACGELG--------------------DLKLGTWVEEFV----VENKMTL------- 261
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
N ++++ Y G + AR +F+ M +++ ++WNAM+ GY ++ + +EA+ MR
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMR 321
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
++ DQ+TL IL+ CA + + +GK+V + + +++V AL+DMY KCG+L
Sbjct: 322 MSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLD 381
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---TRPSKFTFETLLA 485
+A FY M +++VSWNA+++ A GQ++EA+ F M E P+ TF +L+
Sbjct: 382 NAFRVFYGMPN-KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLS 440
Query: 486 ACANISSLEQGKQI 499
AC + +++G+++
Sbjct: 441 ACVHAGLVDEGRRL 454
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + I YGKCG+L AR +FD M ++D +WNAM+ Y QNG ++LF DM S
Sbjct: 264 FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMS 323
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ +QIT +L + A L + KQ+ +RGF +V + ++LVD Y KC + +A
Sbjct: 324 STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNA 383
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE--DIRPLNFTFANALFACS 255
R+F + NKN VSWN ++ G +EA+ +F M+ E + P + TF L AC
Sbjct: 384 FRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACV 443
Query: 256 FLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL----DQ 304
EG ++ G++ KI+ + +++ + G LE+A + ++
Sbjct: 444 HAGLVDEGRRLFHMMSSSFGLVPKIEH------YSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Query: 305 PDE 307
PDE
Sbjct: 498 PDE 500
>gi|115470801|ref|NP_001058999.1| Os07g0172600 [Oryza sativa Japonica Group]
gi|34394447|dbj|BAC83621.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113610535|dbj|BAF20913.1| Os07g0172600 [Oryza sativa Japonica Group]
Length = 872
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 178/632 (28%), Positives = 315/632 (49%), Gaps = 24/632 (3%)
Query: 83 AIEC-YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT-LELFLDMNHSGVS 140
A+ C Y + G L DARG+F+ MP RD S++A++ + + G P +EL M +G++
Sbjct: 84 AVMCGYLRAGALADARGVFERMPARDAASYSALISGHARLGSPAAAGVELLGRMRLAGMA 143
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVK-----RGFCGNVILESSLVDAYGKCMVMT 195
+ T+ +L + A + Q+H L VK G G+++++++L+ Y K
Sbjct: 144 PTEYTFVGLLTACARRGNPRLGSQVHALAVKGNSPCGGGGGSLLVDNALLGMYVKGGRFD 203
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
DA ++FD ++ ++ SWN ++ + G EA +F M + F+ + L A +
Sbjct: 204 DALKVFDGMERRDVSSWNTVLSGLVELGRYDEAFELFGDMRDSGVGADRFSLSALLAAAA 263
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR-LEDARGLLDQPDERNIISWT 314
+EG +H + +K E D V +L Y + G +ED + ++ +++ISWT
Sbjct: 264 EGFGLHEGAAVHALSLKSGLEMDLSVGNALVGFYAEHGHSIEDVVDVFERMPAKDVISWT 323
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-------SLLWKEALDFVFLM 367
+++GY G + A ++F+ MP RN +++NA+L G+ + K L + L
Sbjct: 324 GLLNGYMEFGLVDMAMDVFDRMPVRNFVTYNAVLTGFNHNKEGVRVTFARKSGLRGLGLF 383
Query: 368 RKTTKD---IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
++ +D I VT+ +LN CA +E KM ++V F + S ++ AL+DM KC
Sbjct: 384 KQMLEDGLEISDVTVTGVLNACAITAERKMSEQVQAFAIKCGCGSTPWIDAALIDMCIKC 443
Query: 425 GNLRSARIWFYQMSQRRD-KVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS---KFTF 480
G A + F + ++WN++L R G+ E+A+++F +M +F
Sbjct: 444 GRSGDAHLLFEKWRHEESFHIAWNSLLAASFRDGEYEKALSTFLKMFRSNDVQFIDEFIL 503
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
T+L AC + E GKQ+HCF ++ A++ +Y KC LE A+ VFK
Sbjct: 504 TTVLGACGALGFAEFGKQMHCFAAKSGLLSAQGVGNAIISMYGKCGALETAVNVFKRMPC 563
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL--AL 598
D++ N++I + +G E L+++ M++ IKPD +TF ++ +C + +
Sbjct: 564 RDLVSWNALITSHLLHRQGDEILDLWSQMERLPIKPDSVTFLLVISSCSYTSSNSADKCR 623
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
+ F SM YGI P +EHY + + +G+ +E E + +MPF P+ + R D C +
Sbjct: 624 ELFLSMSSIYGIEPAVEHYAAFVHVLGCWGHFEEAEQLIGKMPFKPSALVWRSCLDSCNR 683
Query: 659 NGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
T+ A R L L P P + + +N +
Sbjct: 684 QPNMTMRRLAMRHLLALEPQDPSTYVLASNLY 715
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 196/467 (41%), Gaps = 75/467 (16%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
V A ++ N + + N + Y K G DDA +FD M RD SWN +L
Sbjct: 168 VHALAVKGNSPCGGGGGSLLVDNALLGMYVKGGRFDDALKVFDGMERRDVSSWNTVLSGL 227
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF---- 174
+ G ELF DM SGV A++ + + +L ++AE L +H L +K G
Sbjct: 228 VELGRYDEAFELFGDMRDSGVGADRFSLSALLAAAAEGFGLHEGAAVHALSLKSGLEMDL 287
Query: 175 -CGN---------------------------VILESSLVDAYGKCMVMTDARRMFDDIQN 206
GN VI + L++ Y + ++ A +FD +
Sbjct: 288 SVGNALVGFYAEHGHSIEDVVDVFERMPAKDVISWTGLLNGYMEFGLVDMAMDVFDRMPV 347
Query: 207 KNAVSWNVI----------VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+N V++N + VR +G + +F +ML + + + T L AC+
Sbjct: 348 RNFVTYNAVLTGFNHNKEGVRVTFARKSGLRGLGLFKQMLEDGLEISDVTVTGVLNACAI 407
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ Q+ IK + +L +M +KCGR DA L ++ W
Sbjct: 408 TAERKMSEQVQAFAIKCGCGSTPWIDAALIDMCIKCGRSGDAHLLFEK--------W--- 456
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT--TKDI 374
E F+ I+WN++LA R +++AL M ++ + I
Sbjct: 457 -----------RHEESFH-------IAWNSLLAASFRDGEYEKALSTFLKMFRSNDVQFI 498
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D+ L +L C L + GK++H F ++ S V NA++ MY KCG L +A F
Sbjct: 499 DEFILTTVLGACGALGFAEFGKQMHCFAAKSGLLSAQGVGNAIISMYGKCGALETAVNVF 558
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTF 480
+M RD VSWNA++T + Q +E + +S+M+ +P TF
Sbjct: 559 KRMPC-RDLVSWNALITSHLLHRQGDEILDLWSQMERLPIKPDSVTF 604
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 53/355 (14%)
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-SLLWKEALDFVFLMRKT 370
+W +++ GY +G + +AR +F MP R+ S++A+++G+ R ++ + MR
Sbjct: 81 AWNAVMCGYLRAGALADARGVFERMPARDAASYSALISGHARLGSPAAAGVELLGRMRLA 140
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-----YSSNIFVSNALLDMYRKCG 425
+ T +L CA ++G +VH + + ++ V NALL MY K G
Sbjct: 141 GMAPTEYTFVGLLTACARRGNPRLGSQVHALAVKGNSPCGGGGGSLLVDNALLGMYVKGG 200
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
A F M +RRD SWN VL+G G+ +EA F +M+ +F+ LL
Sbjct: 201 RFDDALKVFDGM-ERRDVSSWNTVLSGLVELGRYDEAFELFGDMRDSGVGADRFSLSALL 259
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK-CCCLEYAIRVFKESSSLDV 543
AA A L +G +H +++ E+++ ALV Y + +E + VF+ + DV
Sbjct: 260 AAAAEGFGLHEGAAVHALSLKSGLEMDLSVGNALVGFYAEHGHSIEDVVDVFERMPAKDV 319
Query: 544 I-------------------------------ICNSMILGFCHNERG-------REALEV 565
I N+++ GF HN+ G + L
Sbjct: 320 ISWTGLLNGYMEFGLVDMAMDVFDRMPVRNFVTYNAVLTGFNHNKEGVRVTFARKSGLRG 379
Query: 566 FGLMKK---EGIKPDHITFHGILLACIHEGNVKLA--LQFFDSMRCKYGIIPQLE 615
GL K+ +G++ +T G+L AC K++ +Q F +++C G P ++
Sbjct: 380 LGLFKQMLEDGLEISDVTVTGVLNACAITAERKMSEQVQAF-AIKCGCGSTPWID 433
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YGKCG L+ A +F MP RD SWNA++ ++ + L+L+ M +
Sbjct: 539 NAIISMYGKCGALETAVNVFKRMPCRDLVSWNALITSHLLHRQGDEILDLWSQMERLPIK 598
Query: 141 ANQITYANVL 150
+ +T+ V+
Sbjct: 599 PDSVTFLLVI 608
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/609 (26%), Positives = 292/609 (47%), Gaps = 69/609 (11%)
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
D HS ++T + L+S + L L +Q+H L+ K G N+ +++SL+ Y KC
Sbjct: 45 DTQHSDY---ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCR 101
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM----------------- 235
++++AR +FD + VS N+++ Y+ +G+ A +F KM
Sbjct: 102 LISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQ 161
Query: 236 ---------LREDIR-----PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ +D+R P T A+ + A S + +H + K+ E ++V
Sbjct: 162 NNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIV 221
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY C L +AR L D+ ERN+++W +++GY+ SG + AR+LF +P ++V
Sbjct: 222 ATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDV 281
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SW ++ GY + EAL M +T ++V + +++ C + G++ HG
Sbjct: 282 VSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGI 341
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I R + F+ ++ Y CG + A + F ++ + SWNA+++G+ R G E+
Sbjct: 342 IVRTGFDCYDFIQATIIHFYAACGEINLAFLQF-ELGSKDHVSSWNALISGFVRNGMIEQ 400
Query: 462 AMTSFSEM------QWET--------------------------RPSKFTFETLLAACAN 489
A F EM W + +P++ T ++ +A A
Sbjct: 401 ARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIAT 460
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL--DVIICN 547
+ +L +G+ H +++ N +N AL+++Y KC + A+++F E V N
Sbjct: 461 LGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWN 520
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
++I G + +L++F +++ IKP+ ITF G+L AC H G V ++F M+
Sbjct: 521 AIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNL 580
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
Y I P ++HY CMI L R G +KE + + +MP V + + CR +G +GE
Sbjct: 581 YNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGER 640
Query: 668 AARRLNELN 676
AA L +L+
Sbjct: 641 AAENLAKLD 649
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 255/506 (50%), Gaps = 37/506 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y K G+LD+AR LF++MP + S+ M+ QN + +F DM +GV
Sbjct: 122 NIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVI 181
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N++T A+V+ + + + + LH L K G I+ ++LV Y C + +AR +
Sbjct: 182 PNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVL 241
Query: 201 FDDIQNKNAVSWNVIVRRYLVAG------------------------NG-------KEAV 229
FD+I +N V+WNV++ Y +G +G EA+
Sbjct: 242 FDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEAL 301
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
M+ MLR + P + + AC + EG Q HG+I++ F+ D + ++ Y
Sbjct: 302 RMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFY 361
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
CG + A + + ++ SW +++SG+ +G I +AR+LF+EMPER+V SW++M++
Sbjct: 362 AACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMIS 421
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
GY+++ AL M +++T+ + + A L + G+ H +I N
Sbjct: 422 GYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPL 481
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS-WNAVLTGYARRGQSEEAMTSFSE 468
N ++ AL+DMY KCG++ A FY++ R VS WNA++ G A G + ++ FS+
Sbjct: 482 NDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQ 541
Query: 469 MQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVYTKC 525
+Q +P+ TF +L+AC + ++ G++ + ++N Y I N+ G ++++ +
Sbjct: 542 LQRVRIKPNSITFIGVLSACCHAGLVDTGEK-YFKGMKNLYNIEPNIKHYGCMIDLLGRA 600
Query: 526 CCL-EYAIRVFKESSSLDVIICNSMI 550
L E A + K DV+I +++
Sbjct: 601 GRLKEAAEMIRKMPMKADVVIWGTLL 626
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 182/448 (40%), Gaps = 72/448 (16%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
H++ +C+S + AR L + P V N + Y K G +D AR LF+ +P +
Sbjct: 227 HMYCVCSS---LGNARVLFDEI----PERNVVTWNVMLNGYSKSGLVDLARDLFERIPAK 279
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
D SW ++ Y Q G L ++ M +GV N++ +++ + + + +Q H
Sbjct: 280 DVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFH 339
Query: 167 GLIVKRGF----------------CGNVILE---------------SSLVDAYGKCMVMT 195
G+IV+ GF CG + L ++L+ + + ++
Sbjct: 340 GIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIE 399
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
AR++FD++ ++ SW+ ++ Y A+ +F +M+ ++P T + A +
Sbjct: 400 QARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIA 459
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER--NIISW 313
L + EG H I+ +D + +L +MY KCG + A L + +R ++ W
Sbjct: 460 TLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPW 519
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+I+ G A+ G + +LF++ +++
Sbjct: 520 NAIICGLAMHGHANVSLKLFSQ-------------------------------LQRVRIK 548
Query: 374 IDQVTLGLILNVCAGLSEIKMG-KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ +T +L+ C + G K G + + NI ++D+ + G L+ A
Sbjct: 549 PNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAE 608
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+M + D V W +L G E
Sbjct: 609 MIRKMPMKADVVIWGTLLAACRTHGNVE 636
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 65/296 (21%)
Query: 369 KTTKDID-QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
K T+ D ++TL L C+ L + G+++H + ++ SNIFV N+L+ Y KC +
Sbjct: 44 KDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLI 103
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE--------------------------- 460
+AR F S D VS N +L GY + G +
Sbjct: 104 SNARSLFDTCSV-LDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQN 162
Query: 461 ----EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH--------------- 500
EA+ F +M++ P++ T ++++A +++ + + +H
Sbjct: 163 NCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVA 222
Query: 501 ---------CFVIRNCY-------EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
C + N E NVV ++ Y+K ++ A +F+ + DV+
Sbjct: 223 TNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVV 282
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
++I G+ ER EAL ++ M + G+ P+ + ++ AC V QF
Sbjct: 283 SWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQF 338
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 260/498 (52%), Gaps = 36/498 (7%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACS 255
A F +I + S+NV++R A N + F+ ++ ++P N T+ ACS
Sbjct: 79 ASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACS 138
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L + G H +I+ + D V SL MY +CG+
Sbjct: 139 NLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGK--------------------- 177
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+ +AR++F+E+ +++++SWN+M++GY++ EA+ M + +
Sbjct: 178 ----------MGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPN 227
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+++L +L C L ++K+G V F+ N + N F+ +AL+ MY KCG+L SAR F
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
M +++DKV+WNA++TGYA+ G SEEA+ F +M+ T P + T +L+ACA+I +L+
Sbjct: 288 SM-KKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GKQ+ + ++ +V ALV++Y KC L+ A RVF + + N+MI
Sbjct: 347 LGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALA 406
Query: 555 HNERGREALEVFGLMKKEG--IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + +EAL +F M EG + P+ ITF G+L AC+H G V + F M +G++P
Sbjct: 407 FHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVP 466
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
++EHY CM+ L+ R G+++E DFV MP P +L + C+K + E + L
Sbjct: 467 KIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLL 526
Query: 673 NELNPWAPFQFKITTNRF 690
EL P + I++ +
Sbjct: 527 LELEPSNSGNYVISSKLY 544
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 235/494 (47%), Gaps = 63/494 (12%)
Query: 13 LSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFY 72
L K KP P++ + +S S L Q C S K + +++ + L+T
Sbjct: 17 LQKPHSKPNPNR---QALSDKFNS-----------LLQQCLSIKQL---KQIHAQLLTNS 59
Query: 73 PTPPVFLLNRAIECYGKCGNLDD---ARGLFDEMPERDGGSWNAML-GAYTQNGFPGRTL 128
P L K +L D A F + + S+N M+ G T L
Sbjct: 60 IHKPNSFLY-------KIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLAL 112
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
E + M G+ N +TY + + + L + + H +++RG + + SL+ Y
Sbjct: 113 EFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMY 172
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
+C M DAR++FD+I K+ VSWN ++ Y + EAV +F +M+ +P +
Sbjct: 173 ARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLV 232
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+ L AC L D+ LG+ E +V +E+ L
Sbjct: 233 SVLGACGELG--------------------DLKLGTWVEEFV----VENKMTL------- 261
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
N ++++ Y G + AR +F+ M +++ ++WNAM+ GY ++ + +EA+ MR
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMR 321
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
++ DQ+TL IL+ CA + + +GK+V + + +++V AL+DMY KCG+L
Sbjct: 322 MSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLD 381
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---TRPSKFTFETLLA 485
+A FY M ++++VSWNA+++ A GQ++EA+ F M E P+ TF +L+
Sbjct: 382 NAFRVFYGMP-KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLS 440
Query: 486 ACANISSLEQGKQI 499
AC + +++G+++
Sbjct: 441 ACVHAGLVDEGRRL 454
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 19/243 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + I YGKCG+L AR +FD M ++D +WNAM+ Y QNG ++LF DM S
Sbjct: 264 FMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMS 323
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ +QIT +L + A L + KQ+ +RGF +V + ++LVD Y KC + +A
Sbjct: 324 STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNA 383
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE--DIRPLNFTFANALFACS 255
R+F + KN VSWN ++ G +EA+ +F M+ E + P + TF L AC
Sbjct: 384 FRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACV 443
Query: 256 FLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL----DQ 304
EG ++ G++ KI+ + +++ + G LE+A + ++
Sbjct: 444 HAGLVDEGRRLFHMMSSSFGLVPKIEH------YSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Query: 305 PDE 307
PDE
Sbjct: 498 PDE 500
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/650 (25%), Positives = 311/650 (47%), Gaps = 34/650 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ + L Q C+S+K + R++ ++ + I+ Y +CG++ +A+ +F+
Sbjct: 5 AFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEI 64
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +D +W M+G Y Q G R L +F M V ++TY +L + A L
Sbjct: 65 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 124
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++HG I+++GF G+V + ++L++ Y KC + A F +++++ VSW ++ +
Sbjct: 125 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH 184
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
A ++ +M + + P T A + EG ++G++ E D V+
Sbjct: 185 DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVM 244
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
S M+ G L DAR LF +M +R+V+
Sbjct: 245 NSAVNMFGNAGLLGDAR-------------------------------RLFEDMVDRDVV 273
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+WN ++ Y ++ + EA+ +++ + +T L+LNV L+ + GK +H +
Sbjct: 274 TWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELV 333
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
Y + V+ AL+ +Y +C A F M + D ++W + YA+ G +EA
Sbjct: 334 KEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFRKEA 392
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F EMQ E RP+ T +L CA++++L++G+QIH +I N + + +V AL+ +
Sbjct: 393 LQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINM 452
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC + A+ VF++ + D+++ NSM+ + + E L++F M+ +G+K D ++F
Sbjct: 453 YGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSF 512
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L A H G+V Q+F +M + I P E Y C++ L R G ++E D V ++
Sbjct: 513 VSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS 572
Query: 642 FN-PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + CR + + AA ++ E +P + + +N +
Sbjct: 573 GCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 622
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 33/342 (9%)
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+P F L CS + G ++H + FE +++V G L +MY +CG + +A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ + + +++ +WT ++ Y G A +F +M E +V+
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMP----------------- 103
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+VT ILN CA +K G E+HG I + + ++FV AL++M
Sbjct: 104 --------------TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINM 149
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
Y KCG++R A F ++ + RD VSW A++ + Q A + MQ + P+K T
Sbjct: 150 YNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKIT 208
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
T+ A + + L +GK ++ V E +V + V ++ L A R+F++
Sbjct: 209 LYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMV 268
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
DV+ N +I + NE EA+ +FG ++++G+K + ITF
Sbjct: 269 DRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITF 310
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+P F LL C++ +++ G+++H V +E N + G L+++Y +C + A +
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF+ DV MI +C AL +F M++E + P +T+ IL AC +
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
+K ++ + + G + +I +Y + G ++ D R+ V I
Sbjct: 121 LKDGMEIHGQI-LQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI- 178
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
C ++ L W RR+ +L+ P + + T
Sbjct: 179 AACVQHDQFALARWLYRRM-QLDGVVPNKITLYT 211
>gi|302756227|ref|XP_002961537.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
gi|300170196|gb|EFJ36797.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
Length = 675
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 187/692 (27%), Positives = 319/692 (46%), Gaps = 70/692 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA L + C ++A+ E R++ ++ ++ + FLLN ++ +G+ G + DA +FD +P
Sbjct: 5 YAVLIRQCTLARAVPEGRRVHAH-ISKHGCRDSFLLNLLVQMFGRFGCVADASRVFDSIP 63
Query: 105 ERDGGSWNAMLGAYTQNG-----------FPGRTLELFLDMNHSGVSANQITYANVLR-- 151
R+ SWN M+ A+ QNG P LF M+ G+ A+ IT+ +V+
Sbjct: 64 ARNCYSWNIMVAAFAQNGHLQQARITFDQMPPSDRSLFALMDLDGIRADTITFVSVIDAC 123
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SS ++LG++ +H + G + + ++LV YGKC + ++ MFD ++ +N V+
Sbjct: 124 SSLRRIDLGIA--VHVEARESGTEMHYAVATALVSMYGKCRRLERSKEMFDRMEERNMVT 181
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
W ++ Y A + F + D IRP F +AL AC L G +IH I
Sbjct: 182 WTAMITAYAQNAQLDWAALEVFDAMEGDGIRPDKCVFVSALEACGALGDLAVGRKIHRRI 241
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
E + +V L MY KCG +E+AR + D +R+++SW +++ YA +G R
Sbjct: 242 ATARMEENLIVANGLIAMYGKCGGVEEARAVFDSTPQRSLLSWNLMIAAYAQNGHPRHCS 301
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLW-KEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
G R + W +EAL +M ++VT IL+ C+ L
Sbjct: 302 ------------------IGCPRGIWWAEEALAGFRIMDLDGIQPNRVTFLSILDACSSL 343
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC------------------------- 424
+ I+ G+ VH I + ++ ++ V +L+ M+ +C
Sbjct: 344 ASIEFGRVVHACIVDSCFAGDVHVGTSLVTMFGRCEHAQEADAAFHAIVAKNILAWTAIL 403
Query: 425 ------GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSK 477
G+L +AR+ F QM + R+ +SW +++ YA G EA F M RP+K
Sbjct: 404 SANALSGHLDAARMLFDQMPE-RNVISWTGMISAYAYSGHRREAHDLFKAMDLLGQRPNK 462
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T+ L ACA + + + IH I + Y + L+ ++ KC L A RVF +
Sbjct: 463 ITYLKALEACAGGITAAEARTIHAKAIESGYSSDTQVAVGLLNLFEKCGSLAIAERVFDD 522
Query: 538 SSSLDVIICNS-MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
++ S MI + + R +LE+F M + G+ P IT +L AC H G +
Sbjct: 523 LGERKTVVAWSIMISAYAQSGRPWRSLELFTEMVQSGVMPTEITVVNLLSACSHGGFLYH 582
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
+ FF SM YG+ P L++Y C++ + R G + ++ + MP+ P + C
Sbjct: 583 SWLFFVSMVGDYGLCPILDNYVCLVDILGRTGQLLLAQELLEAMPYEPNDIAWTSLLSSC 642
Query: 657 RKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ G G ++ +L P +++ N
Sbjct: 643 KTQGDGGRGASVGDQVMDLCPKHSGPYRLVWN 674
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 46/345 (13%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
++ + C + + RK+ + T + + N I YGKCG +++AR +FD
Sbjct: 217 VFVSALEACGALGDLAVGRKIHRRIATARMEENLIVANGLIAMYGKCGGVEEARAVFDST 276
Query: 104 PERDGGSWNAMLGAYTQNGFP--------------GRTLELFLDMNHSGVSANQITYANV 149
P+R SWN M+ AY QNG P L F M+ G+ N++T+ ++
Sbjct: 277 PQRSLLSWNLMIAAYAQNGHPRHCSIGCPRGIWWAEEALAGFRIMDLDGIQPNRVTFLSI 336
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------- 196
L + + + + +H IV F G+V + +SLV +G+C +
Sbjct: 337 LDACSSLASIEFGRVVHACIVDSCFAGDVHVGTSLVTMFGRCEHAQEADAAFHAIVAKNI 396
Query: 197 ------------------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
AR +FD + +N +SW ++ Y +G+ +EA +F M
Sbjct: 397 LAWTAILSANALSGHLDAARMLFDQMPERNVISWTGMISAYAYSGHRREAHDLFKAMDLL 456
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
RP T+ AL AC+ + E IH I+ + D V L ++ KCG L A
Sbjct: 457 GQRPNKITYLKALEACAGGITAAEARTIHAKAIESGYSSDTQVAVGLLNLFEKCGSLAIA 516
Query: 299 RGLLDQPDER-NIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+ D ER +++W+ ++S YA SGR + ELF EM + V+
Sbjct: 517 ERVFDDLGERKTVVAWSIMISAYAQSGRPWRSLELFTEMVQSGVM 561
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 276/553 (49%), Gaps = 39/553 (7%)
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
Q A +LR+SA L QLHG I K GF + +L ++L+D Y KC + A +F
Sbjct: 4 QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLSSPY 261
++++N VSW ++ +L G+ + + +M + P +T + +L AC +
Sbjct: 64 GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G+ IHG+ ++ ++ DVV SL +Y K GR+ DA R + + SG A
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDA---------RRVFDGAGLGSGIA 174
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK--TTKDIDQVTL 379
+WNAM++GY + ++AL MR+ D+ T
Sbjct: 175 ---------------------TWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTF 213
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+L C+GL + G +VH + + +S SN ++ AL+DMY KC L A F ++
Sbjct: 214 ASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERL 273
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQ 495
+R++ + W AV+ G+A+ GQ EA+ F W + RP +++ A+ + +EQ
Sbjct: 274 -ERKNVIQWTAVVVGHAQEGQVTEALELFRRF-WRSGARPDSHVLSSVVGVLADFALVEQ 331
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+Q+HC+ I++ +V ++V++Y KC + A R+F+E + +V+ +M+ G
Sbjct: 332 GRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGK 391
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ GREA+ +F M+ G++PD +T+ +L AC H G V ++F +R + P+ E
Sbjct: 392 HGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAE 451
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G ++E D + MP PTV + + + CR + +G A L +
Sbjct: 452 HYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM 511
Query: 676 NPWAPFQFKITTN 688
+ P + +N
Sbjct: 512 DGDNPVNYVTLSN 524
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 227/459 (49%), Gaps = 39/459 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ A L + A S ++ +L + L N I+ Y KCG LD A +F M
Sbjct: 6 MIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGM 65
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVS 162
+R+ SW A++ + ++G L L +M + +A N+ T + L++ +
Sbjct: 66 RDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAG 125
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV-SWNVIVRRYLV 221
+HGL V+ G+ + ++ SSLV Y K + DARR+FD + + +WN +V Y
Sbjct: 126 VGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185
Query: 222 AGNGKEAVVMFFKMLRED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE--G 277
AG+G++A+++F +M R + +P FTFA+ L ACS L + EG Q+H + F
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS 245
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ ++ G+L +MYVKC RL A + ++ + +N+I WT++V G+A G++ EA ELF
Sbjct: 246 NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRR-- 303
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
W ++ D L ++ V A + ++ G++
Sbjct: 304 ------------------FW-----------RSGARPDSHVLSSVVGVLADFALVEQGRQ 334
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + ++ +++ N+++DMY KCG A F +M + + VSW ++ G + G
Sbjct: 335 VHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREM-RAPNVVSWTTMVNGLGKHG 393
Query: 458 QSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
EA+ F EM+ P + T+ LL+AC++ +++
Sbjct: 394 LGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDE 432
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 17/296 (5%)
Query: 87 YGKCGNLDDARGLFDEMPERDG-GSWNAMLGAYTQNGFPGRTLELFLDMN-HSGV-SANQ 143
Y K G + DAR +FD G +WNAM+ Y G L +F +M H G ++
Sbjct: 151 YSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDE 210
Query: 144 ITYANVLRSSAEELELGVSK---QLHGLIVKRGF--CGNVILESSLVDAYGKCMVMTDAR 198
T+A++L++ + LG ++ Q+H + GF N IL +LVD Y KC + A
Sbjct: 211 FTFASLLKACSG---LGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAM 267
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++F+ ++ KN + W +V + G EA+ +F + R RP + ++ + + +
Sbjct: 268 QVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFA 327
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+G Q+H IK D G DV G S+ +MY+KCG ++A + + N++SWT++V
Sbjct: 328 LVEQGRQVHCYGIK-DPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMV 386
Query: 318 SGYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+G G REA LF EM E + +++ A+L+ + + L E + +R+
Sbjct: 387 NGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR 442
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 183/442 (41%), Gaps = 41/442 (9%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKC 90
H +P ++ +A L + C+ A E ++ + + F L ++ Y KC
Sbjct: 202 HEGQHQPDEFT-FASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKC 260
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
L A +F+ + ++ W A++ + Q G LELF SG + ++V+
Sbjct: 261 RRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVV 320
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
A+ + +Q+H +K +V +S+VD Y KC + +A RMF +++ N V
Sbjct: 321 GVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVV 380
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW +V G G+EAV +F +M + P T+ L ACS E + I
Sbjct: 381 SWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCI 440
Query: 271 IKIDFEGDDVV------LGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAIS 323
+ D V + ++ + G L +AR L+ P E + W +++S +
Sbjct: 441 RR-----DRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVH 495
Query: 324 GRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ REA ++ M N +++ + + W+E MR+
Sbjct: 496 KDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRG--------- 546
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
L G S +++GKEVH F + + + + G++R R+ ++
Sbjct: 547 --LKKQGGCSWVEVGKEVHFF----------YGGGGEEETHPQAGDIR--RVLRDMETRM 592
Query: 441 RDKVSWNAVLTGYARRGQSEEA 462
R+++ +NA +A EE+
Sbjct: 593 REQLGYNADDARFALHDVDEES 614
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 246/446 (55%), Gaps = 15/446 (3%)
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M + DI +F + L ACS +S G +IHG +K D V+ +L +MY +CG
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR- 353
L AR L D+ ER+++SW++++ Y LF +R+++SW AM+AGY R
Sbjct: 160 LVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGYIRC 210
Query: 354 -SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
L E L FV ++ + D L LI++ C + +++GK +H +I RN + ++
Sbjct: 211 NDLEEGERL-FVRMIEENVFPNDITMLSLIIS-CGFVGAVQLGKRLHAYILRNGFGMSLA 268
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
++ AL+DMY KCG +RSAR F M + +D ++W A+++ YA+ + A F +M+
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSM-KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
RP++ T +LL+ CA +L+ GK H ++ + E++V+ + AL+++Y KC + A
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGA 387
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
R+F E+ D+ N M+ G+ + G +AL++F M+ G+KP+ ITF G L AC H
Sbjct: 388 QRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHA 447
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G V F+ M +G++P++EHY CM+ L R G + E + MP P + +
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGA 507
Query: 652 IFDKCRKNGYATLGEWAARRLNELNP 677
+ C+ + + +GE AAR L L P
Sbjct: 508 MLAACKIHKNSNMGELAARELLALEP 533
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 190/397 (47%), Gaps = 55/397 (13%)
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
P L + M + + +VL++ ++ + K++HG VK G +V + ++
Sbjct: 90 PRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNA 149
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY-----------------LVAG--- 223
L+ Y +C + AR +FD + ++ VSW+ ++R Y ++AG
Sbjct: 150 LMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIR 209
Query: 224 --NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ +E +F +M+ E++ P + T + + +C F+ + G ++H I++ F +
Sbjct: 210 CNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLAL 269
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY KCG + AR + D +++++WT+++S YA + I A +LF +M + V
Sbjct: 270 ATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV 329
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+++T+ +L++CA + MGK H +
Sbjct: 330 RP-------------------------------NELTMVSLLSLCAVNGALDMGKWFHAY 358
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
I + ++ + AL+DMY KCG++ A+ F + + RD +WN ++ GY G E+
Sbjct: 359 IDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHGYGEK 417
Query: 462 AMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGK 497
A+ F+EM+ +P+ TF L AC++ + +GK
Sbjct: 418 ALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK 454
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 143/282 (50%), Gaps = 22/282 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ--NGFPGRTL------ 128
VF++N ++ Y +CG+L AR LFD+M ERD SW+ M+ AY GF R++
Sbjct: 144 VFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203
Query: 129 --------------ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
LF+ M V N IT +++ S + + K+LH I++ GF
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGF 263
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
++ L ++LVD YGKC + AR +FD ++NK+ ++W ++ Y A A +F +
Sbjct: 264 GMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQ 323
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M +RP T + L C+ + G H I K E D ++ +L +MY KCG
Sbjct: 324 MRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGD 383
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ A+ L + +R+I +W +++GY + G +A +LF EM
Sbjct: 384 ISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEM 425
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 23/291 (7%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL+ MRK ++D + +L C+ +S +MGKE+HGF +N S++FV NAL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 420 MYRKCGNLRSARIWFYQMSQR---------------------RDKVSWNAVLTGYARRGQ 458
MY +CG+L SAR+ F +MS+R R VSW A++ GY R
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 459 SEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EE F M E P+ T +L+ +C + +++ GK++H +++RN + +++ A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV++Y KC + A +F + DV+ +MI + A ++F M+ G++P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
+T +L C G + + ++F + K G+ + +I +Y + G
Sbjct: 333 ELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCG 382
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 181/382 (47%), Gaps = 38/382 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ YGKCG + AR +FD M +D +W AM+ AY Q +LF+ M +GV N+
Sbjct: 274 VDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNE 333
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T ++L A L + K H I K+G +VIL+++L+D Y KC ++ A+R+F +
Sbjct: 334 LTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE 393
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+++ +WNV++ Y + G G++A+ +F +M ++P + TF AL ACS EG
Sbjct: 394 AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEG 453
Query: 264 -----MQIH--GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTS 315
IH G++ K++ G + ++ + G L++A +++ P NI W +
Sbjct: 454 KGLFEKMIHDFGLVPKVEH------YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGA 507
Query: 316 IVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKT 370
+++ I AREL P+ + +++ Y + W + V MRK
Sbjct: 508 MLAACKIHKNSNMGELAARELLALEPQN--CGYKVLMSNIYAAANRWND----VAGMRKA 561
Query: 371 TKD--IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK---CG 425
KD I + + V + + KMG H I + +S L +M +K G
Sbjct: 562 VKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEK--------ISEMLAEMSKKLKEAG 613
Query: 426 NLRSARIWFYQMSQRRDKVSWN 447
L + + + + + + N
Sbjct: 614 YLPDTSVVLHNIDEEEKETALN 635
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L LCA + A+ + + + V L I+ Y KCG++ A+ LF E +RD
Sbjct: 339 LLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRD 398
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+WN M+ Y +G+ + L+LF +M GV N IT+ L + + G+ + G
Sbjct: 399 ICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHA---GLVVEGKG 455
Query: 168 LIVKR----GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIV 216
L K G V +VD G+ ++ +A +M + + N W ++
Sbjct: 456 LFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509
>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 185/679 (27%), Positives = 315/679 (46%), Gaps = 61/679 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L A + C +A +++++V + VFL N I Y L DA +FDEM
Sbjct: 7 LIAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEM 66
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV-SANQITYANVLRSSAEELELGVS 162
ER+ +W M+ YT +G P + +EL+ M S +AN+ Y+ VL++ ++ +
Sbjct: 67 TERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLG 126
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++ I K G+V+L +S+VD + K +++A F +I N+ SWN ++ Y A
Sbjct: 127 SFVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKA 186
Query: 223 GNGKEAVVMF------------------------------FKMLREDIRPLNFTFANALF 252
G +EAV +F +M RE + F L
Sbjct: 187 GMVEEAVSLFNRIPQPNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACSF G Q+HG ++K E L +L +MY CG L DA + Q
Sbjct: 247 ACSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQ-------- 298
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
E L N V WN+ML+G+ + + AL + L+ K+
Sbjct: 299 ---------------EKPALCN-----TVAVWNSMLSGFLINEENEAALGLLLLLYKSDL 338
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D TL L +C L +++G +VH + + Y + V + L+D++ GN++ A
Sbjct: 339 CFDSYTLSGALKICINLVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQEAHK 398
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
F+++ + D ++++ ++ G + G + A F E+ + +F ++L C++++
Sbjct: 399 LFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCSSLA 457
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
SL GKQIH I+ Y+ V AL ++Y KC ++ ++ +F DV+ +I+
Sbjct: 458 SLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVVLFDGMLERDVVSWTGIIV 517
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
GF N R EA + F M I+P+ +TF G+L AC H G ++ A ++M+C+YG+
Sbjct: 518 GFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEARSILETMKCEYGLE 577
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P LEHY C++ L + G +E E+ + +MP P + + C + A L A +
Sbjct: 578 PYLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKNAGLITVIAEK 637
Query: 672 LNELNPWAPFQFKITTNRF 690
L + P P + +N +
Sbjct: 638 LLKAFPEDPSLYTSLSNAY 656
>gi|125599274|gb|EAZ38850.1| hypothetical protein OsJ_23267 [Oryza sativa Japonica Group]
Length = 872
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 178/632 (28%), Positives = 315/632 (49%), Gaps = 24/632 (3%)
Query: 83 AIEC-YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT-LELFLDMNHSGVS 140
A+ C Y + G L DARG+F+ MP RD S++A++ + + G P +EL M +G++
Sbjct: 84 AVMCGYLRAGALADARGVFERMPARDAASYSALISGHARLGSPAAAGVELLGRMRLAGMA 143
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVK-----RGFCGNVILESSLVDAYGKCMVMT 195
+ T+ +L + A + Q+H L VK G G+++++++L+ Y K
Sbjct: 144 PTEYTFVGLLTACARRGNPRLGSQVHALAVKGNSPCGGGGGSLLVDNALLGMYVKGGRFD 203
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
DA ++FD ++ ++ SWN ++ + G EA +F M + F+ + L A +
Sbjct: 204 DALKVFDGMERRDVSSWNTVLSGLVELGRYDEAFELFGDMRDSGVGADRFSLSALLAAAA 263
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR-LEDARGLLDQPDERNIISWT 314
+EG +H + +K E D V +L Y + G +ED + ++ +++ISWT
Sbjct: 264 EGFGLHEGAAVHALSLKSGLEMDLSVGNALVGFYAEHGHSIEDVVDVFERMPAKDVISWT 323
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-------SLLWKEALDFVFLM 367
+++GY G + A ++F+ MP RN +++NA+L G+ + K L + L
Sbjct: 324 GLLNGYMEFGLVDMAMDVFDRMPVRNFVTYNAVLTGFNHNKEGVRVTFARKSGLRGLGLF 383
Query: 368 RKTTKD---IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
++ +D I VT+ +LN CA +E KM ++V F + S ++ AL+DM KC
Sbjct: 384 KQMLEDGLEISDVTVTGVLNACAITAERKMSEQVQAFAIKCGCGSTPWIDAALIDMCIKC 443
Query: 425 GNLRSARIWFYQMSQRRD-KVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPS---KFTF 480
G A + F + ++WN++L R G+ E+A+++F +M +F
Sbjct: 444 GRSGDAHLLFEKWRHEESFHIAWNSLLAASFRDGEYEKALSTFLKMFRSNDVQFIDEFIL 503
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
T+L AC + E GKQ+HCF ++ A++ +Y KC LE A+ VFK
Sbjct: 504 TTVLGACGALGFAEFGKQMHCFAAKSGLLSAQGVGNAIISMYGKCGALETAVNVFKRMPC 563
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN--VKLAL 598
D++ N++I + +G E L+++ M++ IKPD +TF ++ +C + +
Sbjct: 564 RDLVSWNALITSHLLHRQGDEILDLWSQMERLPIKPDSVTFLLVISSCSYTSSNSADKCR 623
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
+ F SM YGI P +EHY + + +G+ +E E + +MPF P+ + R D C +
Sbjct: 624 ELFLSMSSIYGIEPAVEHYAAFVHVLGCWGHFEEAEQLIGKMPFKPSALVWRSCLDSCNR 683
Query: 659 NGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
T+ A R L L P P + + +N +
Sbjct: 684 QPNMTMRRLAMRHLLALEPQDPSTYVLASNLY 715
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 196/467 (41%), Gaps = 75/467 (16%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
V A ++ N + + N + Y K G DDA +FD M RD SWN +L
Sbjct: 168 VHALAVKGNSPCGGGGGSLLVDNALLGMYVKGGRFDDALKVFDGMERRDVSSWNTVLSGL 227
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF---- 174
+ G ELF DM SGV A++ + + +L ++AE L +H L +K G
Sbjct: 228 VELGRYDEAFELFGDMRDSGVGADRFSLSALLAAAAEGFGLHEGAAVHALSLKSGLEMDL 287
Query: 175 -CGN---------------------------VILESSLVDAYGKCMVMTDARRMFDDIQN 206
GN VI + L++ Y + ++ A +FD +
Sbjct: 288 SVGNALVGFYAEHGHSIEDVVDVFERMPAKDVISWTGLLNGYMEFGLVDMAMDVFDRMPV 347
Query: 207 KNAVSWNVI----------VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+N V++N + VR +G + +F +ML + + + T L AC+
Sbjct: 348 RNFVTYNAVLTGFNHNKEGVRVTFARKSGLRGLGLFKQMLEDGLEISDVTVTGVLNACAI 407
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ Q+ IK + +L +M +KCGR DA L ++ W
Sbjct: 408 TAERKMSEQVQAFAIKCGCGSTPWIDAALIDMCIKCGRSGDAHLLFEK--------W--- 456
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT--TKDI 374
E F+ I+WN++LA R +++AL M ++ + I
Sbjct: 457 -----------RHEESFH-------IAWNSLLAASFRDGEYEKALSTFLKMFRSNDVQFI 498
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D+ L +L C L + GK++H F ++ S V NA++ MY KCG L +A F
Sbjct: 499 DEFILTTVLGACGALGFAEFGKQMHCFAAKSGLLSAQGVGNAIISMYGKCGALETAVNVF 558
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTF 480
+M RD VSWNA++T + Q +E + +S+M+ +P TF
Sbjct: 559 KRMPC-RDLVSWNALITSHLLHRQGDEILDLWSQMERLPIKPDSVTF 604
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 53/355 (14%)
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-SLLWKEALDFVFLMRKT 370
+W +++ GY +G + +AR +F MP R+ S++A+++G+ R ++ + MR
Sbjct: 81 AWNAVMCGYLRAGALADARGVFERMPARDAASYSALISGHARLGSPAAAGVELLGRMRLA 140
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-----YSSNIFVSNALLDMYRKCG 425
+ T +L CA ++G +VH + + ++ V NALL MY K G
Sbjct: 141 GMAPTEYTFVGLLTACARRGNPRLGSQVHALAVKGNSPCGGGGGSLLVDNALLGMYVKGG 200
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
A F M +RRD SWN VL+G G+ +EA F +M+ +F+ LL
Sbjct: 201 RFDDALKVFDGM-ERRDVSSWNTVLSGLVELGRYDEAFELFGDMRDSGVGADRFSLSALL 259
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK-CCCLEYAIRVFKESSSLDV 543
AA A L +G +H +++ E+++ ALV Y + +E + VF+ + DV
Sbjct: 260 AAAAEGFGLHEGAAVHALSLKSGLEMDLSVGNALVGFYAEHGHSIEDVVDVFERMPAKDV 319
Query: 544 I-------------------------------ICNSMILGFCHNERG-------REALEV 565
I N+++ GF HN+ G + L
Sbjct: 320 ISWTGLLNGYMEFGLVDMAMDVFDRMPVRNFVTYNAVLTGFNHNKEGVRVTFARKSGLRG 379
Query: 566 FGLMKK---EGIKPDHITFHGILLACIHEGNVKLA--LQFFDSMRCKYGIIPQLE 615
GL K+ +G++ +T G+L AC K++ +Q F +++C G P ++
Sbjct: 380 LGLFKQMLEDGLEISDVTVTGVLNACAITAERKMSEQVQAF-AIKCGCGSTPWID 433
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YGKCG L+ A +F MP RD SWNA++ ++ + L+L+ M +
Sbjct: 539 NAIISMYGKCGALETAVNVFKRMPCRDLVSWNALITSHLLHRQGDEILDLWSQMERLPIK 598
Query: 141 ANQITYANVL 150
+ +T+ V+
Sbjct: 599 PDSVTFLLVI 608
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 292/599 (48%), Gaps = 91/599 (15%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y D AR +F++MP+RD SWN ML Y +NG LF
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALF--------- 145
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
NQ+ +V+ +A + GF N +E +AR++
Sbjct: 146 -NQMPEKDVVSWNA---------------MLSGFAQNGFVE--------------EARKI 175
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + KN +SWN ++ Y+ G ++A +F
Sbjct: 176 FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS-------------------------- 209
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
K+D+E V L YV+ RL+DAR L D+ R+ ISW +++GY
Sbjct: 210 -----------KMDWE--IVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGY 256
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A +G + EAR LF E+P R+V +W AM++G+ ++ + EA M + ++V+
Sbjct: 257 AQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWN 312
Query: 381 LILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ +I+ +E+ + RN S N V+ Y +CGN+ A+I F +M Q
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNIDQAKILFDEMPQ 367
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQ 498
R D +SW A+++GYA+ GQSEEA+ F +M+ + ++ L++CA I++LE GKQ
Sbjct: 368 R-DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQ 426
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H +++ ++ + AL+ +Y KC +E A VF++ + D++ N+MI G+ +
Sbjct: 427 LHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGF 486
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EAL +F MK IKPD +T G+L AC H G V +++F+SM YGI +HY
Sbjct: 487 GKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYT 545
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L R G + E + + MPF P + R +G LGE AA ++ E+ P
Sbjct: 546 CMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEP 604
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 154/319 (48%), Gaps = 10/319 (3%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
S+ I +AR+L + P+ N + Y +CGN+D A+ LFDEMP+RD SW AM
Sbjct: 321 SQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ Y Q+G L LF+ M G N+ A L S AE L + KQLHG +VK GF
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
I ++L+ YGKC + +A +F+DI K+ VSWN ++ Y G GKEA+ +F
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
M + I+P + T L ACS +GM+ + + + + ++ + G
Sbjct: 497 M-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 294 RLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLA 349
RL++A L+ P + +W +++ I G +A E EM N + +
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 350 GYTRSLLWKEALDFVFLMR 368
Y S W+E + MR
Sbjct: 616 LYAASGRWREVREMRSKMR 634
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 77/434 (17%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A + + EAR+L L P VF + + + G LD+A +F+EMPE++ SWN
Sbjct: 257 AQNGLLSEARRLFEEL----PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
AM+ Y Q+ + ELF M S+
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSS------------------------------- 341
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
+++V Y +C + A+ +FD++ ++ +SW ++ Y +G +EA+ +F
Sbjct: 342 --------WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
KM R+ A AL +C+ +++ G Q+HG ++K F+ + +L MY KC
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC 453
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G +E+A + + E++I+SW ++++GYA G +EA LF M
Sbjct: 454 GSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM---------------- 497
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNI 411
K T D VTL +L+ C+ + G E +++N ++N
Sbjct: 498 ----------------KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANA 541
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++D+ + G L A M D +W A+L G +R E +E +
Sbjct: 542 KHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL-GASRIHGDTELGEKAAEKVF 600
Query: 472 ETRPSKFTFETLLA 485
E P LL+
Sbjct: 601 EMEPDNSGMYVLLS 614
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 156/372 (41%), Gaps = 66/372 (17%)
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVC 386
E++ + + + +++ WN ++ Y R + AL F + R++T + + G + N
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN-- 104
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
++ ++V + D + N +L Y K GNL +AR F QM + +D VSW
Sbjct: 105 ---NKFDCARKVFEKMPDRD----LISWNVMLSGYVKNGNLSAARALFNQMPE-KDVVSW 156
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI------- 499
NA+L+G+A+ G EEA F +M ++ ++ LL+A +E +++
Sbjct: 157 NAMLSGFAQNGFVEEARKIFDQM---LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW 213
Query: 500 -----HCFV--------------------IRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
+C + +R+ N++ G Y + L A R+
Sbjct: 214 EIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITG-----YAQNGLLSEARRL 268
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F+E DV +M+ GF N EA +F M ++ + ++++ ++ + +
Sbjct: 269 FEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQI 324
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ A + FD M + + M+ Y + G + + + + MP + I
Sbjct: 325 EKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI-- 377
Query: 655 KCRKNGYATLGE 666
+GYA G+
Sbjct: 378 ----SGYAQSGQ 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI-H 500
D V WN ++ Y R+GQ E A++ F+ M+ R S T+ +++ + + + +++
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMR---RRSTVTYNAMISGYLSNNKFDCARKVFE 115
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
R+ NV+ G Y K L A +F + DV+ N+M+ GF N
Sbjct: 116 KMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EA ++F M + + I+++G+L A + G ++ A + FDS + + I+ + C+
Sbjct: 171 EARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVS----WNCL 221
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA-ARRLNELNP 677
+ Y R + + +RMP + I GYA G + ARRL E P
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMI------TGYAQNGLLSEARRLFEELP 273
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 172/654 (26%), Positives = 309/654 (47%), Gaps = 40/654 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L Q + + + + S+++ P +FL N + Y KCG+ A LFD+M
Sbjct: 62 YVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMS 121
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ + ++N+++ Y Q + + LF G+ ++ T A L + ++ L K
Sbjct: 122 KSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKM 181
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGLI+ G V+L +SL+D Y KC + AR +FD + VSWN ++ Y+ G
Sbjct: 182 IHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGK 241
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS--FLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+E + + KM + + +T +AL ACS F G +H IK+ D VV
Sbjct: 242 YEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVG 301
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY K +G + +A ++F++M ++NV+
Sbjct: 302 TALLDMYAK-------------------------------TGSLDDAIQIFDQMVDKNVV 330
Query: 343 SWNAMLAGYTRSLLWKE-----ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+NAM+AG + ++ AL+ F M+ T +L C + + K K+
Sbjct: 331 MYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQ 390
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + +N S+ ++ + L+D+Y G++ A + F + V A++ GY + G
Sbjct: 391 VHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI-HNLTIVPMTAMIXGYLQNG 449
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ E A++ F E+ +E +P +F T++++CAN+ L G+QI + + +
Sbjct: 450 EFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQN 509
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+ + +Y K L A F++ + D++ ++MI + EAL F LMK GI+P
Sbjct: 510 SQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEP 569
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+H F G+L+AC H G V+ L++FD+M Y + ++H C++ L R G + + E
Sbjct: 570 NHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESL 629
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ R+ F M R + CR + + A+++ EL P A + + N +
Sbjct: 630 ILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIY 683
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 217/460 (47%), Gaps = 40/460 (8%)
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ Y +++S+ + +L K +H ++K F + L+++L++ Y KC A ++FD
Sbjct: 60 VDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDK 119
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N V++N ++ Y+ N + +++F K R ++ +T A AL ACS + G
Sbjct: 120 MSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAG 179
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IHG+I+ V+ SL +MY KCG+++ AR L D D+ + +SW S+++GY +
Sbjct: 180 KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQN 239
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G+ E + +M +N +++N TLG L
Sbjct: 240 GKYEELLTILQKM-HQNGLAFNT------------------------------YTLGSAL 268
Query: 384 NVCAG-LSEIKM-GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
C+ + KM G +H + ++ V ALLDMY K G+L A F QM +
Sbjct: 269 KACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVD-K 327
Query: 442 DKVSWNAVLTGYARRGQSEE-----AMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+ V +NA++ G ++ E+ A+ F EM+ +PS FT+ +LL AC + +
Sbjct: 328 NVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKF 387
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
KQ+H + +N + L+++Y+ + A+ F +L ++ +MI G+
Sbjct: 388 AKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQ 447
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
N AL +F + KPD I+ +C + G ++
Sbjct: 448 NGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLR 487
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 33/288 (11%)
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
R++ E F + + +S + + Y+ + L E++D+V L++ TK
Sbjct: 28 RQSIESFATLGSVS-LSSSQVFPAYSSTFLL-ESVDYVKLVQSATKT------------- 72
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
++ GK VH + + + +F+ N LL+MY KCG+ RSA F +MS + + V++
Sbjct: 73 ---GKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMS-KSNIVTY 128
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
N++++GY + ++ M F + + + K+T L AC+ +L GK IH ++
Sbjct: 129 NSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILV 188
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
VV +L+++Y+KC ++YA +F S LD + NS+I G+ N + E L +
Sbjct: 189 YGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTI 248
Query: 566 FGLMKKEGIKPDHITFHGILLAC-------------IHEGNVKLALQF 600
M + G+ + T L AC +H+ +KL L
Sbjct: 249 LQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL 296
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 182/593 (30%), Positives = 287/593 (48%), Gaps = 43/593 (7%)
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+R +NA + + Q G +EL S + TY++VL+ A L K+
Sbjct: 63 DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKK 120
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +I + +L LV Y C + + RR+FD ++ KN WN +V Y G+
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALF---------ACSFLSSPY--EGMQIHGVII-- 271
KE++ +F M+ + I A+ LF + + + S Y G+ G+ I
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240
Query: 272 KIDFEGDDVVLGSLTEMYVKC---GRLEDARGL----LDQPDERNIISWTSIVSGYAISG 324
++ + G DV L ++ + V C G L + + + ER I +++ Y+ G
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ A +F +M ERNV+SW +M+AGYTR A+ + M K +D V IL+
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA + GK+VH +I N+ SN+FV NAL+DMY KCG++ A F M + D +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK-DII 419
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
SWN ++ E +P T +L ACA++S+LE+GK+IH +++
Sbjct: 420 SWNTMIG--------------------ELKPDSRTMACILPACASLSALERGKEIHGYIL 459
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
RN Y + ALV++Y KC L A +F S D++ MI G+ + G EA+
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIA 519
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
F M+ GI+PD ++F IL AC H G ++ +FF M+ + I P+LEHY CM+ L
Sbjct: 520 TFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLL 579
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + + +F+ +P P + + CR L E A R+ EL P
Sbjct: 580 SRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEP 632
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 218/543 (40%), Gaps = 104/543 (19%)
Query: 45 YAHLFQLCASSKAIVEARKLES---------------NLVTFYPT--------------- 74
Y+ + QLCA SK++ + +K+ S LV+ Y T
Sbjct: 102 YSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTME 161
Query: 75 -PPVFLLNRAIECYGKCGNL--------------------DDARGLFDEMPERDGGSWNA 113
V+L N + Y K G+ + A LFD++ +RD SWN+
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNS 221
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ Y NG R LE++ M + G+ + T +VL A L + K +H L +K
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKST 281
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F + ++L+D Y KC + A R+F+ + +N VSW ++ Y G A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQ 341
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M +E ++ + L AC+ S G +H I + E + V +L +MY KCG
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCG 401
Query: 294 RLEDARGLLDQPDERNIISWTSIVS------------------------GYAISGRIRE- 328
++ A + ++IISW +++ G I G I
Sbjct: 402 SMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRN 461
Query: 329 ------------------------ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
AR LF+ +P ++++SW M++GY EA+
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATF 521
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYR 422
MR + D+V+ IL C+ ++ G +I +ND++ + + ++D+
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLS 580
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET 482
+ GNL A + + D W A+L G R E +E +E P +
Sbjct: 581 RTGNLSKAYEFIETLPIAPDATIWGALLCG-CRIYHDIELAEKVAERVFELEPENTGYYV 639
Query: 483 LLA 485
LLA
Sbjct: 640 LLA 642
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
++A +ESNL F+ N ++ Y KCG++D A +F M +D SWN M+G
Sbjct: 378 IKANNMESNL---------FVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE- 427
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ + T A +L + A L K++HG I++ G+ +
Sbjct: 428 --------------------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++LVD Y KC V+ AR +FD I +K+ VSW V++ Y + G G EA+ F +M
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDA 527
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLE 296
I P +F + L+ACS +G + I+K DF + + + ++ + G L
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLS 586
Query: 297 DARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAG- 350
A ++ P + W +++ G I I + A +F PE + +LA
Sbjct: 587 KAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENT--GYYVLLANI 644
Query: 351 YTRSLLWKE 359
Y + W+E
Sbjct: 645 YAEAEKWEE 653
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+ G LK D A + CAS A+ +++ ++ + + N ++ Y
Sbjct: 423 TMIGELKPDSRT----MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG L AR LFD +P +D SW M+ Y +G+ + F +M +G+ +++++ +
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 149 VL 150
+L
Sbjct: 539 IL 540
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/620 (26%), Positives = 296/620 (47%), Gaps = 67/620 (10%)
Query: 124 PGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
P + +F + NH +++ + L+S + + +Q+H LI K G N +++
Sbjct: 33 PQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQN 92
Query: 183 SLVDAYGKC-----------------------MV--------MTDARRMFDDIQNKNAVS 211
SL++ Y KC MV + +AR++FD + NK VS
Sbjct: 93 SLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVS 152
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
+ ++ ++ G +EA+ +F M + P + T N + ACS L +HG+++
Sbjct: 153 YTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVV 212
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K+ G +V +L Y C + +AR L D+ ERN+++W +++GYA +G + EARE
Sbjct: 213 KMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARE 272
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF+ + +++VISW M+ GY + +EAL+ M +T ++V + +++ C +
Sbjct: 273 LFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTA 332
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
I G ++HG + + + F+ ++ Y CG + A + F ++ + SWNA+
Sbjct: 333 IVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQF-EVGVKDHLESWNALTA 391
Query: 452 GYARRGQSEEAMTSFSEMQ------WET--------------------------RPSKFT 479
G+ + G + A+ +F +M W T +P++ T
Sbjct: 392 GFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVT 451
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-- 537
++ +A A + +L++GK H ++ N R AL+++Y KC + A++ F +
Sbjct: 452 MVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIR 511
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
V N++I G + LEVF M++ IKP+ ITF G+L AC H G V+
Sbjct: 512 DEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESG 571
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
+ F +M+ Y + P ++HY CMI + R G ++E E+ + MP + + + CR
Sbjct: 572 KRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACR 631
Query: 658 KNGYATLGEWAARRLNELNP 677
+G +GE AA L L P
Sbjct: 632 THGNVNIGERAAENLARLAP 651
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/609 (25%), Positives = 282/609 (46%), Gaps = 68/609 (11%)
Query: 9 LKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNL 68
L++I + + KP P + + + S + C+S I + R++ S +
Sbjct: 20 LRHISTSTFTKPNPQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLI 79
Query: 69 VTFYPTPPVFLLNRAIECYGKCGNL-------------------------------DDAR 97
F+ N I Y KCG++ D+AR
Sbjct: 80 FKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNAR 139
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFD MP + S+ M+ + QNGF LE+F DM GV N +T NV+ + +
Sbjct: 140 KLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLG 199
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV--- 214
E+ + +HGL+VK G VI+ ++L+ AY C + +ARR+FD++ +N V+WNV
Sbjct: 200 EVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLN 259
Query: 215 ----------------------------IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
++ Y+ G +EA+ ++ ML+ P
Sbjct: 260 GYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVM 319
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
N + AC ++ +G Q+HG ++K F+ + + ++ Y CG ++ A +
Sbjct: 320 IVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGV 379
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ ++ SW ++ +G+ +G + A + F++M R+V SW+ M++GY +S K AL+
Sbjct: 380 KDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHK 439
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M ++VT+ + + A L ++ GK H ++ N + AL+DMY KCG+
Sbjct: 440 MLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGS 499
Query: 427 LRSARIWFYQMSQRRDKVS-WNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLL 484
+ SA +F Q+ VS WNA++ G A G + + FS+MQ + +P+ TF +L
Sbjct: 500 INSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVL 559
Query: 485 AACANISSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKE-SSSL 541
+AC + +E GK+I +++ Y + ++ G ++++ + LE A + +
Sbjct: 560 SACCHAGLVESGKRIF-KTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEA 618
Query: 542 DVIICNSMI 550
D++I +++
Sbjct: 619 DIVIWGTLL 627
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 203/509 (39%), Gaps = 80/509 (15%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ ++ R + +V + V + + Y C + +AR LFDEMPER+ +W
Sbjct: 195 CSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTW 254
Query: 112 NAMLGAYTQNGF----------------------------PGR---TLELFLDMNHSGVS 140
N ML Y + G GR LE++ M +G
Sbjct: 255 NVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHG 314
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVI-------------------- 179
N++ N++ + + QLHG +VKRGF C N I
Sbjct: 315 PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQ 374
Query: 180 --------LES--SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
LES +L + K +M A + FD + ++ SW+ ++ Y + + K A+
Sbjct: 375 FEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMAL 434
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F KML I+P T + A + L + EG H + +D + +L +MY
Sbjct: 435 ELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMY 494
Query: 290 VKCGRLEDARGLLDQ-PDERNIIS-WTSIVSGYAISGRIREARELFNEMP----ERNVIS 343
KCG + A +Q DE + +S W +I+ G A G E+F++M + N I+
Sbjct: 495 AKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPIT 554
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLILNVC--AGLSEIKMGKEVH 399
+ +L+ + L E+ +F K+ ++ D G ++++ AGL E E
Sbjct: 555 FIGVLSACCHAGL-VESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLE-----EAE 608
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRG 457
I ++I + LL R GN+ +++ VL YA G
Sbjct: 609 EMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAG 668
Query: 458 QSEEAMTSFSEMQWETRPSKFTFETLLAA 486
+ EE S MQ +T + + +A
Sbjct: 669 KWEEVSFVRSVMQGQTMDREPGYSGFVAG 697
>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 885
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 276/529 (52%), Gaps = 33/529 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ + ++ Y K G ++ A +F MPE++ SWNA+L Y Q G L+LF M
Sbjct: 229 LFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLE 288
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
++ T + VL+ A L K LH L ++R + + L +LVD Y KC + +
Sbjct: 289 CEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYE 348
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++F+ I+ + V+W+ I+ G+ +EA +F M ++ +RP F+FA+ + A +
Sbjct: 349 ALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATN 408
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ Y G IH I K +E D+ V +L MY+K G ++D + D R+++SW ++
Sbjct: 409 VGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNAL 468
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG+ + +F +M ++ G +L FV ++R
Sbjct: 469 LSGFYDFETSDQGLRIFCQM----------LMEGLVPNL-----YTFVGVLRS------- 506
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
C+ L + GK+VH I +N N FV AL+DMY K L A + F +
Sbjct: 507 ---------CSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNK 557
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
++ RD +W ++ G+++ ++E+A+ +M E +P++FT + L+ C+ +++L
Sbjct: 558 LTN-RDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGN 616
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+Q+H I++ + +V ALV++Y KC C+E A +FK S D + N++I G+
Sbjct: 617 GQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQ 676
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ +G++ALE F +M E I PD +TF G+L AC + G V+ + FD M
Sbjct: 677 HGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEGKKHFDLM 725
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/591 (27%), Positives = 287/591 (48%), Gaps = 34/591 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ + + CAS + E + N++ P L I Y KCG+L AR + M
Sbjct: 96 YSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SW A++ Y G ++ + +M + N+ T A VL++S+ ++ K
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKL 215
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +K G ++ + S+LVD Y K M A R+F + KN VSWN ++ Y G+
Sbjct: 216 IHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGD 275
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
GK + +F +ML ++ N+T + L C+ + EG +H + I+ +E D+ + +
Sbjct: 276 GKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCN 335
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG +A + + +E +I++W++I++G G +EA ELF+
Sbjct: 336 LVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFH---------- 385
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
LMR+ +Q + +++ + ++ +G+ +H I +
Sbjct: 386 ---------------------LMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICK 424
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
Y S+ V NAL+ MY K G ++ F M+ RD VSWNA+L+G+ S++ +
Sbjct: 425 YGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTN-RDLVSWNALLSGFYDFETSDQGLR 483
Query: 465 SFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +M E P+ +TF +L +C+++ ++ GKQ+H +I+N + N AL+++Y
Sbjct: 484 IFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYA 543
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
K CLE A F + ++ D+ +I G ++ +A++ G M +EGIKP+ T
Sbjct: 544 KNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLAS 603
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
L C + Q S+ K G + ++ +Y + G M++ E
Sbjct: 604 CLSGCSRMATLGNGQQ-LHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAE 653
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+ +L CA+ +L +G IH VI++ E + +L+ +Y KC L +A +V
Sbjct: 96 YSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
DV+ ++I G+ G + ++ + M+KE I P+ T +L A ++K +
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFG-K 214
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN 659
K G++ L ++ LY ++G M + +R+ F +P + N
Sbjct: 215 LIHLEAIKTGLLLDLFVGSALVDLYAKFGEM----ELADRVFFG--MPEKNNVSWNALLN 268
Query: 660 GYATLGE 666
GYA G+
Sbjct: 269 GYAQRGD 275
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 25 TLTKTISGHLKSDE-----------------PVSYSLYAHLFQLCASSKAIVEARKLESN 67
T T I+GH ++D+ P ++L A C+ + ++L S
Sbjct: 565 TWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTL-ASCLSGCSRMATLGNGQQLHSL 623
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
+ + VF+ + ++ YGKCG ++DA +F + RD +WN ++ Y+Q+G +
Sbjct: 624 AIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQHGQGQKA 683
Query: 128 LELFLDMNHSGVSANQITYANVL 150
LE F M + +++T+ VL
Sbjct: 684 LEAFRMMLDEDIDPDEVTFIGVL 706
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 169/584 (28%), Positives = 296/584 (50%), Gaps = 38/584 (6%)
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M +RD +WN M+ Y + + F M G+ + +++ NV + + +
Sbjct: 56 VFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGD 115
Query: 159 LGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ L+G+++K G + ++ + SS + Y + + R++FD K+A WN ++
Sbjct: 116 FKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMI 175
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
++ + E V +F + ++ + L+ TF +AL A S L G Q+H +K
Sbjct: 176 GGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHT 235
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
VL ++ MY +C ++ + E+F +
Sbjct: 236 VLSVTVLNAILVMYSRCNS-------------------------------VQTSFEVFEK 264
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
MPE++V+SWN M++G+ ++ L +E L V+ M+K D VT+ +L+ + L ++G
Sbjct: 265 MPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIG 324
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR-SARIWFYQMSQRRDKVSWNAVLTGYA 454
K+ H ++ R+ + + + L+DMY K G +R S R++ Q RD+ +WNAV+ GY
Sbjct: 325 KQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYT 383
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G E+A +F M + RP+ T ++L AC+++ S+ GKQ+H IR + N+
Sbjct: 384 QNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIF 443
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
R ALV++Y+K + YA VF +SS + + +MILG+ + G AL +F MKK G
Sbjct: 444 VRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSG 503
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I+PD ITF +L AC + G V L+ F+SM+ + I P HY C+ + R G + E
Sbjct: 504 IQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEA 563
Query: 634 EDFVNRM-PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+FV ++ + + + CR +G+ LGE + RL E+N
Sbjct: 564 YEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMN 607
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 208/429 (48%), Gaps = 41/429 (9%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD-MN 135
+F+++ AI Y + G LD R +FD E+ WN M+G + QN + LFL M
Sbjct: 137 LFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMK 196
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+ +T+ + L + ++ LG+ +Q+H +K +V + ++++ Y +C +
Sbjct: 197 TEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQ 256
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+ +F+ + K+ VSWN ++ ++ G +E +++ ++M ++ + T + L A S
Sbjct: 257 TSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAAS 316
Query: 256 FLSSPYEGMQIHGVIIK--IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD--ERNII 311
L + G Q H +I+ I F+G D L +MY K G + ++ + + + R+
Sbjct: 317 NLRNREIGKQTHAYLIRHGIKFDGMD---SYLIDMYAKSGLIRISQRVFENNNIQNRDQA 373
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W ++++GY +G + +A F M E+N+
Sbjct: 374 TWNAVIAGYTQNGLVEQAFITFRLMLEQNLRP---------------------------- 405
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ VTL IL C+ L I +GK++HG R NIFV AL+DMY K G + A
Sbjct: 406 ---NAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAE 462
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F Q S+ R+ V++ ++ GY + G E A++ F M+ +P TF +L+AC+
Sbjct: 463 SVFTQSSE-RNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYA 521
Query: 491 SSLEQGKQI 499
+++G +I
Sbjct: 522 GLVDEGLRI 530
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 162/304 (53%), Gaps = 11/304 (3%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V +LN + Y +C ++ + +F++MPE+D SWN M+ + QNG L L +M
Sbjct: 239 VTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQK 298
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVM 194
G A+ +T ++L +++ + KQ H +++ G F G ++S L+D Y K ++
Sbjct: 299 QGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG---MDSYLIDMYAKSGLI 355
Query: 195 TDARRMFD--DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++R+F+ +IQN++ +WN ++ Y G ++A + F ML +++RP T A+ L
Sbjct: 356 RISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILP 415
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS L S G Q+HGV I+ + + V +L +MY K G + A + Q ERN ++
Sbjct: 416 ACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVT 475
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR 368
+T+++ GY G A LF+ M + + I++ A+L+ + + L E L M+
Sbjct: 476 YTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMK 535
Query: 369 KTTK 372
+ K
Sbjct: 536 RDFK 539
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 211/444 (47%), Gaps = 42/444 (9%)
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F + ++ ++WN +V Y+ EA+ F M++ I+P +F N A S +
Sbjct: 54 HKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSV 113
Query: 258 SSPYEGMQIHGVIIKI--DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
++G+++K+ ++ D V+ S MY + G L+ R + D E++ W +
Sbjct: 114 GDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNT 173
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL--MRKTTKD 373
++ G+ I N+ L G ++FL M+
Sbjct: 174 MIGGH---------------------IQNNSFLEGV-----------YLFLQAMKTEHTI 201
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D VT L + L + +G+++H F +N ++ V NA+L MY +C +++++
Sbjct: 202 LDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEV 261
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F +M + +D VSWN +++G+ + G EE + EMQ + T +LL+A +N+ +
Sbjct: 262 FEKMPE-KDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRN 320
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS--SLDVIICNSMI 550
E GKQ H ++IR+ + + + L+++Y K + + RVF+ ++ + D N++I
Sbjct: 321 REIGKQTHAYLIRHGIKFDGM-DSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVI 379
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ N +A F LM ++ ++P+ +T IL AC G++ L Q + +Y +
Sbjct: 380 AGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQ-LHGVSIRYSL 438
Query: 611 IPQLEHYECMIKLYCRYGYMKELE 634
+ ++ +Y + G + E
Sbjct: 439 DQNIFVRTALVDMYSKSGAINYAE 462
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 10/274 (3%)
Query: 84 IECYGKCGNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I+ Y K G + ++ +F+ + RD +WNA++ YTQNG + F M +
Sbjct: 346 IDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRP 405
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +T A++L + + + + KQLHG+ ++ N+ + ++LVD Y K + A +F
Sbjct: 406 NAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVF 465
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+N+V++ ++ Y G G+ A+ +F M + I+P TF L ACS+
Sbjct: 466 TQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVD 525
Query: 262 EGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS-WTSIV 317
EG++I +K DF + + +M + GR+ +A + Q +E ++I W S++
Sbjct: 526 EGLRIFES-MKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLL 584
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
+ G I E+ N + E N + LAGY
Sbjct: 585 GACRLHGHIELGEEVSNRLLEMNSVD---RLAGY 615
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 156/310 (50%), Gaps = 9/310 (2%)
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
R ++F M +R+VI+WN M++ Y ++ + EA+ LM K V+ +
Sbjct: 51 RLLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAI 110
Query: 387 AGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+ + + K ++G + + N+Y++++FV ++ + MY + G L R F ++ +V
Sbjct: 111 SSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEV 170
Query: 445 SWNAVLTGYARRGQSEEAMTSFSE-MQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
WN ++ G+ + E + F + M+ E T TF + L A + + L G+Q+H F
Sbjct: 171 -WNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAF 229
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
++N ++V A++ +Y++C ++ + VF++ DV+ N+MI GF N E
Sbjct: 230 TMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEG 289
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI-IPQLEHYECMI 621
L + M+K+G D +T +L A + N ++ Q + ++GI ++ Y +I
Sbjct: 290 LMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYL-IRHGIKFDGMDSY--LI 346
Query: 622 KLYCRYGYMK 631
+Y + G ++
Sbjct: 347 DMYAKSGLIR 356
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A + C+S +I ++L + + +F+ ++ Y K G ++ A +F + E
Sbjct: 411 ASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSE 470
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
R+ ++ M+ Y Q+G L LF M SG+ + IT+ VL +
Sbjct: 471 RNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSA 517
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 292/599 (48%), Gaps = 91/599 (15%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y D AR +F++MP+RD SWN ML Y +NG LF
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALF--------- 145
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
NQ+ +V+ +A + GF N +E +AR++
Sbjct: 146 -NQMPEKDVVSWNA---------------MLSGFAQNGFVE--------------EARKI 175
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + KN +SWN ++ Y+ G ++A +F
Sbjct: 176 FDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDS-------------------------- 209
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
K+D+E V L YV+ RL+DAR L D+ R+ ISW +++GY
Sbjct: 210 -----------KMDWE--IVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGY 256
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A +G + EAR LF E+P R+V +W AM++G+ ++ + EA M + ++V+
Sbjct: 257 AQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWN 312
Query: 381 LILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
++ +I+ +E+ + RN S N V+ Y +CGN+ A+I F +M Q
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNIDQAKILFDEMPQ 367
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQ 498
R D +SW A+++GYA+ GQSEEA+ F +M+ + ++ L++CA I++LE GKQ
Sbjct: 368 R-DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQ 426
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H +++ ++ + AL+ +Y KC +E A VF++ + D++ N+MI G+ +
Sbjct: 427 LHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGF 486
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EAL +F MK IKPD +T G+L AC H G V +++F+SM YGI +HY
Sbjct: 487 GKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYT 545
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L R G + E + + MPF P + R +G LGE AA ++ E+ P
Sbjct: 546 CMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEP 604
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 154/319 (48%), Gaps = 10/319 (3%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
S+ I +AR+L + P+ N + Y +CGN+D A+ LFDEMP+RD SW AM
Sbjct: 321 SQQIEKARELFDQM----PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ Y Q+G L LF+ M G N+ A L S AE L + KQLHG +VK GF
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
I ++L+ YGKC + +A +F+DI K+ VSWN ++ Y G GKEA+ +F
Sbjct: 437 QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFES 496
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
M + I+P + T L ACS +GM+ + + + + ++ + G
Sbjct: 497 M-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAG 555
Query: 294 RLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLA 349
RL++A L+ P + +W +++ I G +A E EM N + +
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSN 615
Query: 350 GYTRSLLWKEALDFVFLMR 368
Y S W+E + MR
Sbjct: 616 LYAASGRWREVREMRSKMR 634
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 182/434 (41%), Gaps = 77/434 (17%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A + + EAR+L L P VF + + + G LD+A +F+EMPE++ SWN
Sbjct: 257 AQNGLLSEARRLFEEL----PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
AM+ Y Q+ + ELF M S+
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSS------------------------------- 341
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
+++V Y +C + A+ +FD++ ++ +SW ++ Y +G +EA+ +F
Sbjct: 342 --------WNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
KM R+ A AL +C+ +++ G Q+HG ++K F+ + +L MY KC
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC 453
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G +E+A + + E++I+SW ++++GYA G +EA LF M
Sbjct: 454 GSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM---------------- 497
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNI 411
K T D VTL +L+ C+ + G E +++N ++N
Sbjct: 498 ----------------KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANA 541
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++D+ + G L A M D +W A+L G +R E +E +
Sbjct: 542 KHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL-GASRIHGDTELGEKAAEKVF 600
Query: 472 ETRPSKFTFETLLA 485
E P LL+
Sbjct: 601 EMEPDNSGMYVLLS 614
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 156/372 (41%), Gaps = 66/372 (17%)
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVC 386
E++ + + + +++ WN ++ Y R + AL F + R++T + + G + N
Sbjct: 47 ESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN-- 104
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
++ ++V + D + N +L Y K GNL +AR F QM + +D VSW
Sbjct: 105 ---NKFDCARKVFEKMPDRD----LISWNVMLSGYVKNGNLSAARALFNQMPE-KDVVSW 156
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI------- 499
NA+L+G+A+ G EEA F +M ++ ++ LL+A +E +++
Sbjct: 157 NAMLSGFAQNGFVEEARKIFDQM---LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW 213
Query: 500 -----HCFV--------------------IRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
+C + +R+ N++ G Y + L A R+
Sbjct: 214 EIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITG-----YAQNGLLSEARRL 268
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F+E DV +M+ GF N EA +F M ++ + ++++ ++ + +
Sbjct: 269 FEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQI 324
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ A + FD M + + M+ Y + G + + + + MP + I
Sbjct: 325 EKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI-- 377
Query: 655 KCRKNGYATLGE 666
+GYA G+
Sbjct: 378 ----SGYAQSGQ 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQI-H 500
D V WN ++ Y R+GQ E A++ F+ M+ R S T+ +++ + + + +++
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMR---RRSTVTYNAMISGYLSNNKFDCARKVFE 115
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
R+ NV+ G Y K L A +F + DV+ N+M+ GF N
Sbjct: 116 KMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EA ++F M + + I+++G+L A + G ++ A + FDS + + I+ + C+
Sbjct: 171 EARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDS-KMDWEIVS----WNCL 221
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA-ARRLNELNP 677
+ Y R + + +RMP + I GYA G + ARRL E P
Sbjct: 222 MGGYVRKKRLDDARSLFDRMPVRDKISWNIMI------TGYAQNGLLSEARRLFEELP 273
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 193/686 (28%), Positives = 320/686 (46%), Gaps = 73/686 (10%)
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+ S ++T + VF + + Y + LF + +D WN+++ ++ NG
Sbjct: 58 QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 117
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILE 181
R + +L M S NQ T V+ + AE + +HGL K G F GN +
Sbjct: 118 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 177
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
SS + Y KC + A MF +I K+ V+W ++ Y+ + F+M R
Sbjct: 178 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 237
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P T + AC L + EG +HG+ +K F +VV ++ MY +CG E+A
Sbjct: 238 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 297
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNVISWNAM-------- 347
+ D++++ISWTSI++ ++ G + E LF EM P+ VIS M
Sbjct: 298 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 357
Query: 348 ----------------LAGYTRSLLWKEALDFVFL---------MRKTTKDIDQVTLGL- 381
L+G T + L F L K+++D + LG
Sbjct: 358 FEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYS 417
Query: 382 --------------------------ILNVCAGLSEI---KMGKEVHGFIHRNDYSSNIF 412
+++V + S++ +G+ +H + +N N+
Sbjct: 418 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 477
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
V+N+L+DMY K G++ + F++ Q RD +SWN +++ Y + G EA+ F +M E
Sbjct: 478 VANSLMDMYGKSGHVTATWRIFHRTLQ-RDVISWNTLISSYKQSGILAEAIILFDKMVKE 536
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P+K T +L+ACA+++SL++G++IH ++ N +E N+ R AL+++Y KC LE +
Sbjct: 537 KVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETS 596
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
++F + DVI+ N MI + + A+E+F LM++ IKP+ TF +L AC H
Sbjct: 597 RKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHT 656
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
G+V FD M+ KYGI P L+HY +I L R G ++ E V MP P +
Sbjct: 657 GHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGS 715
Query: 652 IFDKCRKNGYATLGEWAARRLNELNP 677
+ C+ + +G AR E +P
Sbjct: 716 LLSACKIHNEFEVGVRLARYAIESDP 741
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ AI R + + V + N ++ YGK G++ +F +RD SW
Sbjct: 451 CSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISW 510
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ++ +Y Q+G + LF M V N++T VL + A L +++H I +
Sbjct: 511 NTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKE 570
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF N+ + ++L+D Y KC + +R++F+ + ++ + WNV++ Y + G+ + A+ +
Sbjct: 571 NGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEI 630
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F M +I+P TF + L AC+ EG + + K E S+ ++ +
Sbjct: 631 FQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGR 690
Query: 292 CGRLEDARGL-LDQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERN 340
G LE A L L P + W S++S I +R AR P+ +
Sbjct: 691 SGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKND 744
>gi|7406390|emb|CAB85500.1| putative protein [Arabidopsis thaliana]
Length = 837
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 305/617 (49%), Gaps = 9/617 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
N I Y K G +A +F + S+ A++ +++ L++F M +G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT--DA 197
N+ T+ +L + + Q+HGLIVK GF +V + +SL+ Y K + D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSF 256
++FD+I ++ SWN +V + G +A +F++M R E +FT + L +C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S G ++HG I+I + V +L Y K ++ L + ++ +++T +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y G + A E+F + E+N I++NA++AG+ R+ +AL M + ++
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L ++ C +SE K+ +++HGF + + N + ALLDM +C + A F Q
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 437 MSQRRDKV-SWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSL 493
D + +++ GYAR G ++A++ F E + + + +LA C +
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E G QIHC+ ++ Y ++ +L+ +Y KCC + AI++F DVI NS+I +
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA--LQFFDSMRCKYGII 611
G EAL ++ M ++ IKPD IT ++ A + + KL+ F SM+ Y I
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY +++ +G ++E ED +N MP P V +LR + D CR + ++ + A+
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKL 717
Query: 672 LNELNPWAPFQFKITTN 688
+ P P ++ + +N
Sbjct: 718 ILSTKPETPSEYILKSN 734
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N I Y KC + DDA +F+ M E D SWN+++ Y L L+ MN
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 137 SGVSANQITYANVLRS 152
+ + IT V+ +
Sbjct: 616 KEIKPDIITLTLVISA 631
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 262/534 (49%), Gaps = 39/534 (7%)
Query: 164 QLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS---WNVIVRRY 219
QLH ++K G G+ SL++A + + + +S +NV++R +
Sbjct: 34 QLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAF 93
Query: 220 LVAGNGKEAVVMFFKMLR-EDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
L AG+ ++A+ +F +ML P + T A AL +CS + + G + +K
Sbjct: 94 LHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVA 153
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D VL SL MY CG + AR + D +E ++ W +IV+ Y +G E E+F M
Sbjct: 154 DRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGML 213
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
E V D+VTL ++ C + + K+GK
Sbjct: 214 EVGVA-------------------------------FDEVTLVSVVTACGRIGDAKLGKW 242
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V G + + N + AL+DMY KCG + AR F M Q RD V+W+A+++GY +
Sbjct: 243 VAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM-QSRDVVAWSAMISGYTQAD 301
Query: 458 QSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
Q EA+ FSEMQ P+ T ++L+ACA + +LE GK +H +V R + +
Sbjct: 302 QCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGT 361
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
ALV+ Y KC C++ A+ F+ + ++I G N RGREALE+F M++ GI+P
Sbjct: 362 ALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEP 421
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+TF G+L+AC H V+ + FDSM YGI P++EHY CM+ L R G + E F
Sbjct: 422 TDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQF 481
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + R + C + +GE A +++ LNP + + +N +
Sbjct: 482 IRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIY 535
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 210/482 (43%), Gaps = 51/482 (10%)
Query: 20 PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFL 79
PTP + L++D L+A L + S + A+ S L +P L
Sbjct: 11 PTPGRAGPAPPRAPLRADPSYLPQLHAALIK---SGELTGSAKSFHSLLEAAAASPT--L 65
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH--S 137
L A+ + P +N ++ A+ G P L LF++M H S
Sbjct: 66 LPYAVSLF-----------RLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAAS 114
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
A+Q T A L+S + L V + + VKRG + + SSL+ Y C + A
Sbjct: 115 ACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAA 174
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R +FD + V WN IV YL G+ E V MF ML + T + + AC +
Sbjct: 175 RLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRI 234
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G + G + + + ++ +L +MY KCG + AR L D R++++W++++
Sbjct: 235 GDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMI 294
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGY + + REA LF+EM L R D+ V
Sbjct: 295 SGYTQADQCREALGLFSEMQ----------------------------LARVEPNDVTMV 326
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+ +L+ CA L ++ GK VH ++ R S + AL+D Y KCG + A F M
Sbjct: 327 S---VLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
++ +W A++ G A G+ EA+ FS M + P+ TF +L AC++ +E+G
Sbjct: 384 PV-KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEG 442
Query: 497 KQ 498
++
Sbjct: 443 RR 444
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 31/311 (9%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+ ++ Y KCG + AR LFD M RD +W+AM+ YTQ L LF +M +
Sbjct: 258 LVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLAR 317
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
V N +T +VL + A L K +H + ++ IL ++LVD Y KC + DA
Sbjct: 318 VEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F+ + KN+ +W +++ G G+EA+ +F M I P + TF L ACS
Sbjct: 378 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSC 437
Query: 259 SPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNI 310
EG + +G+ +++ G + ++ + G +++A + P E N
Sbjct: 438 LVEEGRRHFDSMARDYGIKPRVEH------YGCMVDLLGRAGLVDEAYQFIRTMPIEPNA 491
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG--------YTRSLLWKEALD 362
+ W +++S A+ + E + +IS N +G Y + WK+A
Sbjct: 492 VIWRALLSSCAVHRNVGIGEEAL-----KQIISLNPSHSGDYVLLSNIYASAGQWKDAA- 545
Query: 363 FVFLMRKTTKD 373
++RK KD
Sbjct: 546 ---MVRKEMKD 553
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 180/635 (28%), Positives = 314/635 (49%), Gaps = 48/635 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF+ C + ++ A+ L + LV V + + + Y GN+ AR FD + RD
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 108 GGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+WN M+ Y + G + F L M SG++ + T+ +VL++ ++ ++H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
L +K GF +V + +SL+ Y + + +AR +FD++ ++ SWN ++ Y +GN K
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 227 EAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ L +R ++ T + L AC+ G+ IH IK E + V L
Sbjct: 234 EALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
++Y + GRL R+ +++F+ M R++ISWN
Sbjct: 289 IDLYAEFGRL-------------------------------RDCQKVFDRMYVRDLISWN 317
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+++ Y + A+ MR + D +TL + ++ + L +I+ + V GF R
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 406 D-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA-- 462
+ +I + NA++ MY K G + SAR F + D +SWN +++GYA+ G + EA
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIE 436
Query: 463 MTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
M + E + E ++ T+ ++L AC+ +L QG ++H +++N ++V +L ++Y
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC LE A+ +F + ++ + N++I + G +A+ +F M EG+KPDHITF
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V F+ M+ YGI P L+HY CM+ +Y R G ++ F+ M
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR +G LG+ A+ L E+ P
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/558 (25%), Positives = 256/558 (45%), Gaps = 48/558 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S Y + + + C + +++ K+ + F V++ I Y + +
Sbjct: 145 LSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRS 152
+AR LFDEMP RD GSWNAM+ Y Q+G L L +G+ A + +T ++L +
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSA 256
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
E + +H +K G + + + L+D Y + + D +++FD + ++ +SW
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N I++ Y + A+ +F +M I+P T + S L + G ++
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 273 IDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ +D+ +G ++ MY K G ++ AR + + ++ISW +I+SGYA +G EA E
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
++N M E I+ N Q T +L C+
Sbjct: 437 MYNIMEEEGEIAAN------------------------------QGTWVSVLPACSQAGA 466
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ G ++HG + +N ++FV +L DMY KCG L A FYQ+ R + V WN ++
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYE 509
+ G E+A+ F EM E +P TF TLL+AC++ +++G+ CF +++ Y
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW--CFEMMQTDYG 583
Query: 510 INVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
I + G +V++Y + LE A++ K S +L C G L
Sbjct: 584 ITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC-RVHGNVDLGKIA 642
Query: 568 LMKKEGIKPDHITFHGIL 585
++P+H+ +H +L
Sbjct: 643 SEHLFEVEPEHVGYHVLL 660
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 208/461 (45%), Gaps = 40/461 (8%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+S L++ + V+ L C + + S + +F+ N+ I+ Y
Sbjct: 237 TLSNGLRAMDSVTV---VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+ G L D + +FD M RD SWN+++ AY N P R + LF +M S + + +T +
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 149 VLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+ ++ ++ + + G +++G F ++ + +++V Y K ++ AR +F+ + N
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI 266
+ +SWN I+ Y G EA+ M+ M E +I T+ + L ACS + +GM++
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG ++K D V+ SL +MY KCGRLEDA L Q N + W ++++ + G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+A LF EM + V D +T +L+ C
Sbjct: 534 EKAVMLFKEMLDEGV-------------------------------KPDHITFVTLLSAC 562
Query: 387 AGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+ + G+ + + DY + ++ ++DMY + G L +A + MS + D
Sbjct: 563 SHSGLVDEGQWCFEMM-QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
W A+L+ G + + SE +E P + LL+
Sbjct: 622 IWGALLSACRVHGNVDLGKIA-SEHLFEVEPEHVGYHVLLS 661
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 181/615 (29%), Positives = 305/615 (49%), Gaps = 47/615 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS----GVSAN 142
Y +CG++ DA LFDEMPERD +W A++ NG G L + M S G N
Sbjct: 155 YARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPN 214
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGF--CGNVILESSLVDAYGKCMVMTDARRM 200
T + L + EL V LHG VK G C +V+ SSL Y KC DAR +
Sbjct: 215 SRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVV--SSLFSMYTKCDSTEDARIL 272
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F ++ K+ VSW ++ Y AG+ ++AV +F M ++P + L +
Sbjct: 273 FPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKV 332
Query: 261 YEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G H I++ +F GD V++G +L MY KC +++ A
Sbjct: 333 RGGKTFHAAIVRRNF-GDSVLIGNALISMYAKCKQVDIAA-------------------- 371
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD---IDQ 376
+F + +R+ SW++M+ Y ++ L + L+ M+ KD D
Sbjct: 372 -----------TVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDT 420
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L I++ C+ L +++G+ H + ++ N V+NAL+ MY +CGN AR F
Sbjct: 421 NSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIF-G 479
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M + +D V+W+A+++ Y+ G S++A+ + +M E +P+ T +++++CAN+++LE
Sbjct: 480 MVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEH 539
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+ IH V E ++ ALV++Y KC L A ++F DV+ N MI G+
Sbjct: 540 GELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGM 599
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ +AL++F +M++ +KP+ +TF IL AC H G V + F M +Y + P L+
Sbjct: 600 HGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLK 658
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L + G+++E ED V+ MP P + + C+ + +G A++
Sbjct: 659 HYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFAS 718
Query: 676 NPWAPFQFKITTNRF 690
+P + + +N +
Sbjct: 719 DPENDGYYILMSNSY 733
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 230/497 (46%), Gaps = 45/497 (9%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P D WN++L + + TL M SG ++ T V ++AE L V
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 164 QLHGLIVKRGFC---GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+H V+ G G+V + SSLV Y +C + DA R+FD++ ++ V+W ++ +
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 221 VAGNGKEAVVMFFKMLRE----DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
G E + +M+R RP + T + L AC L G +HG +K
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVG 247
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
V+ SL MY KC EDAR L + E++++SWTS++ Y +G +A ELF M
Sbjct: 248 HCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGM 307
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
E + D+V + +L ++++ GK
Sbjct: 308 EESGL-------------------------------QPDEVVISCLLAGLGNDAKVRGGK 336
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
H I R ++ ++ + NAL+ MY KC + A F +M +RD SW++++ Y +
Sbjct: 337 TFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDTDSWSSMVVAYCKA 395
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFET-----LLAACANISSLEQGKQIHCFVIRNCYEIN 511
G + + + EMQ+ + +F ++T ++++C+ + L G+ HC+ I++ N
Sbjct: 396 GLDLKCLELYREMQFRDK-DEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN 454
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
AL+ +Y +C + A ++F + DV+ +++I + H ++AL ++ M
Sbjct: 455 SSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 572 EGIKPDHITFHGILLAC 588
EG+KP+ T ++ +C
Sbjct: 515 EGVKPNSATLVSVISSC 531
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 171/379 (45%), Gaps = 38/379 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL-----F 131
V + N I Y KC +D A +F + +RD SW++M+ AY + G + LEL F
Sbjct: 351 VLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQF 410
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
D + N + S L LG S H +K N + ++L+ YG+C
Sbjct: 411 RDKDEFEYDTNSLISIISSCSRLGRLRLGQSA--HCYSIKHLAGENSSVANALISMYGRC 468
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
AR++F ++ K+ V+W+ ++ Y G+ K+A++++ +ML E ++P + T + +
Sbjct: 469 GNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVI 528
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+C+ L++ G IH + + E D + +L +MY+KCG+L AR + D ER+++
Sbjct: 529 SSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVV 588
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W ++SGY + G +A +LF+ M NV
Sbjct: 589 TWNVMISGYGMHGEAIQALKLFSMMERGNV------------------------------ 618
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ +T IL+ C + G+E+ + N+ ++D+ K G+L+ A
Sbjct: 619 -KPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677
Query: 432 IWFYQMSQRRDKVSWNAVL 450
M D W +L
Sbjct: 678 DVVSAMPIEPDGGIWGTLL 696
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 177/414 (42%), Gaps = 40/414 (9%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH L V G + LV AY + A F +A WN ++R A +
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK---IDFEGDDVV 281
+ +M RP FT A + L + G +H ++ ++ +G V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY +CG + DA L D+ ER++++WT+++SG +G+
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQC--------------- 192
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD----IDQVTLGLILNVCAGLSEIKMGKE 397
E L ++ M ++ D + T+ L C L E+ +G
Sbjct: 193 ----------------GEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTC 236
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HGF + V ++L MY KC + ARI F ++ + +D VSW +++ Y R G
Sbjct: 237 LHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPE-KDLVSWTSLIGAYCRAG 295
Query: 458 QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+E+A+ F M+ +P + LLA N + + GK H ++R + +V+
Sbjct: 296 HAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGN 355
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
AL+ +Y KC ++ A VF+ D +SM++ +C + LE++ M+
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 5/265 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YG+CGN D AR +F + +D +W+A++ +Y+ G L L+ M GV
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T +V+ S A L + +H + G ++ + ++LVD Y KC + AR+M
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ V+WNV++ Y + G +A+ +F M R +++P + TF L AC
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG 319
+G ++ + + E + + ++ K G L++A ++ P E + W +++
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698
Query: 320 YAISGR----IREARELFNEMPERN 340
+ +R A++ F PE +
Sbjct: 699 CKMHDNFEMGLRVAKKAFASDPEND 723
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 177/631 (28%), Positives = 316/631 (50%), Gaps = 40/631 (6%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
++S++ E ++L + ++T L ++ Y +C + A LFD++ + SWN
Sbjct: 22 SASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWN 81
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVK 171
AM+ Y Q G P L LF++M SG + ++ TY V+++ + + V +HG K
Sbjct: 82 AMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFK 141
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G+ + ++++L+ Y A+ +FD +Q + +SWN ++ Y ++AV +
Sbjct: 142 FGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNV 201
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ +M+ + P T + L AC L + G ++H ++ + F G+ VV +L +MYVK
Sbjct: 202 YGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVK 261
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG+ ++EA L M +++V++W ++ GY
Sbjct: 262 CGQ-------------------------------MKEAWLLAKGMDDKDVVTWTTLINGY 290
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ + AL +M+ + V++ +L+ C L + GK +H + R S +
Sbjct: 291 ILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEV 350
Query: 412 FVSNALLDMYRKC--GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
V AL++MY KC GNL S ++ F S++R WNA+L+G+ + + EA+ F +M
Sbjct: 351 IVETALINMYAKCNCGNL-SYKV-FMGTSKKR-TAPWNALLSGFIQNRLAREAIELFKQM 407
Query: 470 QW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ +P TF +LL A A ++ L+Q IHC++IR+ + + LV++Y+KC L
Sbjct: 408 LVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 467
Query: 529 EYAIRVFKESS--SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
YA ++F S D+II +++I + + G+ A+++F M + G+KP+H+TF +L
Sbjct: 468 GYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLH 527
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G V F+ M ++ II ++HY CMI L R G + + + + MP P
Sbjct: 528 ACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNH 587
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + C + LGE AAR +L P
Sbjct: 588 AVWGALLGACVIHENVELGEVAARWTFKLEP 618
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 272/553 (49%), Gaps = 34/553 (6%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L F+ M+ +G T+ ++L+ A +L + +H + RG + ++L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNF 245
Y KC DARR+FD + ++ V+WN +V Y G + A+ M +M E+ RP +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
T + L AC+ + + H I+ E V ++ + Y KCG
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGD----------- 211
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
IR AR +F+ MP +N +SWNAM+ GY ++ +EAL
Sbjct: 212 --------------------IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFN 251
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M + D+ V++ L C L + G VH + R SN+ V NAL+ MY KC
Sbjct: 252 RMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+ A F ++ RR +VSWNA++ G A+ G SE+A+ F+ MQ E +P FT +++
Sbjct: 312 RVDLASHVFDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
A A+IS Q + IH + IR + +V AL+++Y KC + A +F + VI
Sbjct: 371 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVI 430
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+MI G+ + G+ A+E+F MK GI P+ TF +L AC H G V ++F SM
Sbjct: 431 TWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSM 490
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
+ YG+ P +EHY M+ L R G + E F+ +MP +P + + + C+ + L
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVEL 550
Query: 665 GEWAARRLNELNP 677
E +A+++ EL P
Sbjct: 551 AEESAQKIFELGP 563
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 224/462 (48%), Gaps = 34/462 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + L +LCA+ + R + + L Y KC DAR
Sbjct: 56 PPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARR 115
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEEL 157
+FD MP RD +WNA++ Y +NG +E+ + M G + IT +VL + A
Sbjct: 116 VFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANAR 175
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L ++ H ++ G V + ++++DAY KC + AR +FD + KN+VSWN ++
Sbjct: 176 ALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMID 235
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+ +EA+ +F +M+ E + + + AL AC L EGM++H ++++I +
Sbjct: 236 GYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDS 295
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V+ +L MY KC R++ A + D+ D R +SW +++ G A +G +A LF M
Sbjct: 296 NVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQ 355
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
NV D TL ++ A +S+ +
Sbjct: 356 LENVKP-------------------------------DSFTLVSVIPALADISDPLQARW 384
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG+ R +++V AL+DMY KCG + ARI F ++ R ++WNA++ GY G
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF-NSARERHVITWNAMIHGYGSHG 443
Query: 458 QSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F EM+ P++ TF ++L+AC++ +++G++
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 22/361 (6%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
Q C + E ++ LV V ++N I Y KC +D A +FDE+ R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWNAM+ QNG + LF M V + T +V+ + A+ + ++ +HG
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++ +V + ++L+D Y KC + AR +F+ + ++ ++WN ++ Y G GK A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLT 286
V +F +M I P TF + L ACS EG + + +K D+ E G++
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMV 507
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARE----LFNEMPERNV 341
++ + G+L++A + + P + + + +++ + + A E +F P+ V
Sbjct: 508 DLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV 567
Query: 342 ISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
++ +LA Y + +WK+ M K L G S I++ E+H
Sbjct: 568 --YHVLLANIYANASMWKDVARVRTAMEKNG-----------LQKTPGWSIIQLKNEIHT 614
Query: 401 F 401
F
Sbjct: 615 F 615
>gi|79506598|ref|NP_196000.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170265|sp|Q9FFN1.1|PP363_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g03800; AltName: Full=Protein EMBRYO DEFECTIVE 175
gi|9758009|dbj|BAB08606.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|26449508|dbj|BAC41880.1| unknown protein [Arabidopsis thaliana]
gi|58013014|gb|AAW62960.1| embryo-defective 175 [Arabidopsis thaliana]
gi|58013016|gb|AAW62961.1| embryo-defective 175 [Arabidopsis thaliana]
gi|332003273|gb|AED90656.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 896
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 305/617 (49%), Gaps = 9/617 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
N I Y K G +A +F + S+ A++ +++ L++F M +G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT--DA 197
N+ T+ +L + + Q+HGLIVK GF +V + +SL+ Y K + D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSF 256
++FD+I ++ SWN +V + G +A +F++M R E +FT + L +C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S G ++HG I+I + V +L Y K ++ L + ++ +++T +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y G + A E+F + E+N I++NA++AG+ R+ +AL M + ++
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L ++ C +SE K+ +++HGF + + N + ALLDM +C + A F Q
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 437 MSQRRDKV-SWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSL 493
D + +++ GYAR G ++A++ F E + + + +LA C +
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E G QIHC+ ++ Y ++ +L+ +Y KCC + AI++F DVI NS+I +
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA--LQFFDSMRCKYGII 611
G EAL ++ M ++ IKPD IT ++ A + + KL+ F SM+ Y I
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY +++ +G ++E ED +N MP P V +LR + D CR + ++ + A+
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKL 717
Query: 672 LNELNPWAPFQFKITTN 688
+ P P ++ + +N
Sbjct: 718 ILSTKPETPSEYILKSN 734
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N I Y KC + DDA +F+ M E D SWN+++ Y L L+ MN
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 137 SGVSANQITYANVLRS 152
+ + IT V+ +
Sbjct: 616 KEIKPDIITLTLVISA 631
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 183/710 (25%), Positives = 328/710 (46%), Gaps = 78/710 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + CAS + R + +++VT ++ I Y KCG L A +FD+M
Sbjct: 444 FPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS 503
Query: 105 E-RDGGS----WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
E RD WN ++ Y + G L F M G+ + + + VL
Sbjct: 504 ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWY 563
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRR 218
+Q+HG I++ F G+ LE++L+ Y C +A +F ++N+ N V+WNV++
Sbjct: 564 MAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 623
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
++ G ++++ ++ E+ + ++ +F A ACS G Q+H +IK++F+ D
Sbjct: 624 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 683
Query: 279 ------------------------DVVLGSLTEM-------YVKCGRLEDARGL------ 301
D VL E+ ++ GR DA GL
Sbjct: 684 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA 743
Query: 302 ----LDQPDERNIISWTSIVSGYAIS-----------------------------GRIRE 328
+D +++S S+V Y G +
Sbjct: 744 GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTED 803
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A +F M ER+V++W +M+AG+ ++ +K+ALD M K D + +++ G
Sbjct: 804 ADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLG 863
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L +++G +HGF + S++FV+ +L+DMY K G SA + F M + + V+WN+
Sbjct: 864 LENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK-NLVAWNS 922
Query: 449 VLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++ Y+ G E ++ + +Q + T+L A +++++L +GK +H + IR
Sbjct: 923 MISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ 982
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
++ AL+++Y KC CL+YA +F+ +++ NSMI G+ + EA+ +F
Sbjct: 983 IPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFK 1042
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK+ PD +TF ++ +C H G V+ L F MR +YG+ P++EHY ++ L R
Sbjct: 1043 EMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRA 1102
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G + + F+ MP + + + CR + LGE A L ++ P
Sbjct: 1103 GRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEP 1152
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 252/532 (47%), Gaps = 40/532 (7%)
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
A Q G + LEL HS ++ + T+ ++L++ A L + +H IV G
Sbjct: 415 ALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQS 474
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNK-----NAVSWNVIVRRYLVAGNGKEAVVM 231
+ + +SL++ Y KC ++ A ++FD + + WN ++ Y G+ +E +
Sbjct: 475 DPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQ 534
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M IRP ++ + L C+ LS G QIHG II+ FEGD + +L MY
Sbjct: 535 FCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSS 594
Query: 292 CGRLEDARGLLDQPDER-NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
C R +A L + + R NI++W N M+ G
Sbjct: 595 CSRPMEAWSLFGKLENRSNIVAW-------------------------------NVMIGG 623
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ + +W+++L+ L + + + C+ + G++VH + + ++ +
Sbjct: 624 FVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDD 683
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+V +LL MY K G++ A+ F Q+ + ++ NA+++ + G++ +A+ +++M+
Sbjct: 684 PYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-NAMISAFIGNGRAYDALGLYNKMK 742
Query: 471 -WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
ET FT +LL+ C+ + S + G+ +H VI+ + NV + AL+ +Y KC E
Sbjct: 743 AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTE 802
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A VF DV+ SMI GFC N R ++AL++F M+KEG+K D ++ A +
Sbjct: 803 DADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGL 862
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
NV+L K G+ + ++ +Y ++G+ + E + MP
Sbjct: 863 GLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 913
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 174/374 (46%), Gaps = 27/374 (7%)
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
++ + G +A+ + K + FTF + L C+ LS+ Y G IH I+ +
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ D + SL MYVKCG L A + D ++ E+R+
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFD---------------------KMSESRD---S 508
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
P+ V WN ++ GY + ++E L M++ D +L ++L +C LS G
Sbjct: 509 APDITV--WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++HG+I RN + + ++ AL+ MY C A F ++ R + V+WN ++ G+
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G E+++ +S + E + +F AC++ L+ G+Q+HC VI+ ++ +
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+L+ +Y K +E A +VF + +V + N+MI F N R +AL ++ MK
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 746
Query: 575 KPDHITFHGILLAC 588
D T +L C
Sbjct: 747 PVDSFTISSLLSGC 760
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 163/338 (48%), Gaps = 8/338 (2%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
+ PV + L C+ + R + + ++ V + + + Y KCG+ +DA
Sbjct: 745 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 804
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-- 154
+F M ERD +W +M+ + QN L+LF M GV A+ +V+ +
Sbjct: 805 DSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 864
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E +ELG +HG +KRG +V + SLVD Y K A +F + NKN V+WN
Sbjct: 865 ENVELG--HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNS 922
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y G + ++ + ++L+ + + L A S +++ +G +H I++
Sbjct: 923 MISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ 982
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D V +L +MYVKCG L+ A+ + + RN+++W S+++GY G EA LF
Sbjct: 983 IPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFK 1042
Query: 335 EMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR 368
EM +++ A++ + S + +E L+ LMR
Sbjct: 1043 EMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMR 1080
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 257/489 (52%), Gaps = 58/489 (11%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A L C S++ R + + ++ + +F+ NR I+ YGKC LDDAR LFD
Sbjct: 16 SPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDR 75
Query: 103 MPER-------------------------------DGGSWNAMLGAYTQNGFPGRTLELF 131
MP+R D SWN+M+ + Q+ +LE F
Sbjct: 76 MPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ M+ N+ ++ + L + A ++L + Q+H L+ K + +V + S+L+D Y KC
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ A +F + +N V+WN ++ Y G EA+ +F +M+ + P T A+ +
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNI 310
AC+ L + EG+QIH ++K + DD+VLG +L +MY KC ++ +AR + D+ RN+
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+S TS+VSGYA + ++ AR +F++M +RNV+SWNA++AGYT++ +EAL L+++
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE 375
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+ T G +L S+IFV N+L+DMY KCG++
Sbjct: 376 SIWPTHYTFGNLLK------------------------SDIFVGNSLIDMYMKCGSIEDG 411
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
F +M + RD VSWNA++ GYA+ G EA+ F +M +P T +L AC++
Sbjct: 412 SRVFEKMKE-RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSH 470
Query: 490 ISSLEQGKQ 498
+E+G+
Sbjct: 471 AGLVEEGRH 479
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/612 (26%), Positives = 284/612 (46%), Gaps = 119/612 (19%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +A +L S ++ +H I+ F + +++ L+D YGKC + DAR++F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 202 DDIQNKNAVSWNVIVR--------------------------RYLVAGNGK-----EAVV 230
D + +N +WN ++ +V+G + E++
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
F KM RED ++F +AL AC+ L G Q+H ++ K + D + +L +MY
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYS 193
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG + A E+F+ M ERN+++WN+++
Sbjct: 194 KCGS-------------------------------VACAEEVFSGMIERNLVTWNSLITC 222
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSS 409
Y ++ EAL+ M + + D+VTL +++ CA L +K G ++H + N +
Sbjct: 223 YEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRD 282
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------------------- 440
++ + NAL+DMY KC + AR F +MS R
Sbjct: 283 DLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMT 342
Query: 441 -RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R+ VSWNA++ GY + G++EEA+ F ++ E+ P+ +TF LL +
Sbjct: 343 QRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKS------------ 390
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
++ +L+++Y KC +E RVF++ D + N++I+G+ N
Sbjct: 391 ------------DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGY 438
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G EAL++F M G KPDH+T G+L AC H G V+ +F SM ++G+IP +HY
Sbjct: 439 GAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYT 497
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
CM+ L R G + E ++ + MP NP + + C+ +G +G+ AA +L E++PW
Sbjct: 498 CMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPW 557
Query: 679 APFQFKITTNRF 690
+ + +N +
Sbjct: 558 NSGPYVLLSNMY 569
>gi|414592000|tpg|DAA42571.1| TPA: hypothetical protein ZEAMMB73_154468 [Zea mays]
Length = 872
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 176/642 (27%), Positives = 306/642 (47%), Gaps = 26/642 (4%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ-NGFPGR----- 126
P+ N + Y + G L DAR +FD MP RD S++A++ Y + G G
Sbjct: 72 PSSDARTANAVMCAYLRVGRLGDARDVFDWMPARDAASYSALISGYARLAGGSGSVTATV 131
Query: 127 -TLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
+ EL M + G+ + T+ + + A + Q+H L K G +++ +++
Sbjct: 132 ASAELLGRMRLADGLLPTEYTFVGLFTACARRGNPRLGTQVHALAAKSGHSSLLLVANAI 191
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPL 243
+ Y KC DA R FD + ++ SWN ++ + G EA MF +M ++R
Sbjct: 192 LGMYVKCGRFGDAMRAFDGMDRRDVSSWNAVLAGLVELGRHDEAFEMFGEMRASGNVRAD 251
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG-RLEDARGLL 302
F+ + L A +G +H + K E D V +L Y + G +ED +
Sbjct: 252 RFSLSALLTAAGEGVGQLQGEAVHALSFKSGLETDLSVGNALIGFYAEHGASVEDVVSVF 311
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-------SL 355
+ +++ISWT +++GY G + A ++F MP+RN +++NA+L G+ R +
Sbjct: 312 QRMPVKDVISWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGFCRNKEGVRATF 371
Query: 356 LWKEALDFVFLMRKTTKD---IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
K L + L R+ +D I VT+ +LN CA ++ K+ ++VH F+ + S+ +
Sbjct: 372 AKKAGLRGLGLFRQMVEDGLEISDVTVTGVLNACAIAADRKVSEQVHAFVIKCGCVSSPW 431
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRD-KVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
AL+DM KCG A + F Q ++WN++L R G+ E+A+++F +M
Sbjct: 432 SDAALIDMCIKCGRSGDAHLLFEQWQHEESFHIAWNSLLLASVRGGEYEKALSTFLQMFR 491
Query: 472 ETRP---SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ +F ++L C ++ E GKQ+H F ++ A++ +Y KC L
Sbjct: 492 SSGAEFIDEFMLTSVLGVCGSLGFAELGKQMHTFAAKSGLLSARGVGNAIISMYGKCGEL 551
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ AI +F+ S D++ N+MI +G + L+++ M++ ++PD ITF ++ AC
Sbjct: 552 KDAISLFERMSCRDLVSWNAMITAHLLLHQGDDILKIWSEMERSMVRPDSITFLLVISAC 611
Query: 589 IHEGN--VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
H + + F SM YGI P +EHY + + +G E E + MP P
Sbjct: 612 SHTSSDSTDKCRKLFLSMPSTYGIEPAMEHYAAFVYVLGCWGRFDEAEQLIGGMPLQPGA 671
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ R + D C K+ + A + L L P P + +T+N
Sbjct: 672 LVWRSLLDSCSKHSNMAVRRRAMKHLLALEPQDPSTYVLTSN 713
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/647 (26%), Positives = 314/647 (48%), Gaps = 47/647 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD--DARGLF 100
+ Y H + CAS + +A + ++ +P+P +FL N + Y + G D AR L
Sbjct: 14 AFYLHHLRSCAS---LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLL 70
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELEL 159
DEMP R+ S+N ++ AY++ G +LE FL + + V A++ TYA L + + L
Sbjct: 71 DEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRL 130
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K +H L V G V + +SLV Y +C M +ARR+FD + ++ VSWN +V Y
Sbjct: 131 KEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGY 190
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEG 277
L G +E + +F M R + +F + + CS G+ +HG ++K +
Sbjct: 191 LRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDT 250
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D + ++ +MY K G L +A LF +
Sbjct: 251 DLFLASAMVDMYAKRGALSEAVA-------------------------------LFKSVL 279
Query: 338 ERNVISWNAMLAGYTRS------LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ NV+ +NAM+AG R + +EAL ++ + + T ++ C +
Sbjct: 280 DPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGD 339
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
I+ GK++HG + ++ + + F+ +AL+D+Y + F + ++D V+W A+++
Sbjct: 340 IEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVP-KQDVVTWTAMIS 398
Query: 452 GYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G + E A+ F E + +P FT +++ ACA+++ + G+Q+ CF ++ ++
Sbjct: 399 GCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDR 458
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ + +Y + +E AI+ F+E S DV+ +++I + R+AL+ F M
Sbjct: 459 FTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMV 518
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ P+ ITF G+L AC H G V L++++ M+ +YG+ P ++H C++ L R G +
Sbjct: 519 GAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRL 578
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ E F+ F+ + + + CR + G+ A R+ EL P
Sbjct: 579 ADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQP 625
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 236/486 (48%), Gaps = 49/486 (10%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
++L + H ++ YA C+ + + E + + + V VF+ N
Sbjct: 96 ESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSL 155
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y +CG++ +AR +FD ERD SWN+++ Y + G L +F M + N
Sbjct: 156 VSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNS 215
Query: 144 ITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+V++ S + G+++ +HG +VK G ++ L S++VD Y K +++A +F
Sbjct: 216 FALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALF 275
Query: 202 DDIQNKNAVSWNVI----------VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ + N V +N + V + +V +EA+ ++ ++ + P FTF++ +
Sbjct: 276 KSVLDPNVVVFNAMIAGLCRDEAAVHKEVV----REALSLYSELQSRGMEPTEFTFSSVI 331
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC+ G QIHG ++K F+GDD + +L ++Y +ED +++++
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVV 391
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+WT+++SG + NE+ ER + ++ +L +
Sbjct: 392 TWTAMISGC-----------VQNELFERALALFHELLGVGLKP----------------- 423
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
D T+ ++N CA L+ ++ G+++ F ++ + + N+ + MY + GN+ +A
Sbjct: 424 ---DPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAA- 479
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANI 490
I +Q + D VSW+A+++ +A+ G + +A+ F+EM + P++ TF +L AC++
Sbjct: 480 IQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHG 539
Query: 491 SSLEQG 496
+++G
Sbjct: 540 GLVDEG 545
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 276/549 (50%), Gaps = 73/549 (13%)
Query: 163 KQLHGLIVKRGFCGNVILESSLV----DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
KQ+H I + G +++ + L+ D + + A +MF I+ + +N+I++
Sbjct: 54 KQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNL--NYAEKMFKYIRYPCLLIYNLIIKA 111
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ GN K +V+F K+ + + P NFT+ A +L + ++ G++ K E D
Sbjct: 112 FAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFD 171
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL +MY + ++ T ++ + LF+EMP+
Sbjct: 172 TYVRNSLIDMYAQ-------------------LALTDVM------------KMLFDEMPD 200
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKE 397
R+VISWN M++GY + +++A++ M++ + + D+ T+ L+ C L +++GK+
Sbjct: 201 RDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKK 260
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR----------------- 440
+H ++ R++ + NALLDMY KCG L AR F +M +
Sbjct: 261 IHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGE 319
Query: 441 -------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAA 486
RD V W A++ GY + + +EA+ F EMQ + +P KF +LL
Sbjct: 320 LEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTG 379
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA ++EQGK IH F+ N I+ V AL+E+Y KC +E A+ +F D
Sbjct: 380 CAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASW 439
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
S+I G N + +ALE+F MK+ G++PD ITF G+L AC H G V+ +FF+SMR
Sbjct: 440 TSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRM 499
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP---TVPMLRKIFDKCRKNGYAT 663
+Y I P++EHY C++ L R G + E E+ + ++P TVP+ + CR G
Sbjct: 500 EYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVE 559
Query: 664 LGEWAARRL 672
+GE A++L
Sbjct: 560 MGERVAKQL 568
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 223/411 (54%), Gaps = 6/411 (1%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
GNL+ A +F + +N ++ A+ + G RTL LF + G+ + TY V
Sbjct: 85 GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM-FDDIQNKNA 209
++ E+ +++L GL+ K G + + +SL+D Y + + +TD +M FD++ +++
Sbjct: 145 KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQ-LALTDVMKMLFDEMPDRDV 203
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHG 268
+SWNV++ Y+ ++A+ +F +M E + P T + L AC+ L G +IH
Sbjct: 204 ISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHH 263
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
++ + + ++ +L +MY KCG L AR + ++ +N+I WT++VSGYA G + E
Sbjct: 264 Y-VRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEE 322
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
ARELF P R+V+ W AM+ GY + + EA+ M+ D+ + +L CA
Sbjct: 323 ARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQ 382
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
I+ GK +H FI N + V AL++MY KCG + A FY + + +D SW +
Sbjct: 383 TGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGL-RVKDTASWTS 441
Query: 449 VLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
++ G A G++ +A+ FS+M Q RP TF +L+AC++ +E+G++
Sbjct: 442 IICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 160/360 (44%), Gaps = 37/360 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y +F+ + +A KL + ++ N I+ Y + D + LFDEMP
Sbjct: 140 YPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMP 199
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEELELGVSK 163
+RD SWN M+ Y + + +F M SG+ ++ T + L + L + K
Sbjct: 200 DRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGK 259
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H V+ I+ ++L+D Y KC ++ AR +F+++ +KN + W +V Y G
Sbjct: 260 KIHHY-VRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCG 318
Query: 224 ------------------------NG-------KEAVVMFFKMLREDIRPLNFTFANALF 252
NG EAV +F +M ++P F + L
Sbjct: 319 ELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLT 378
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
C+ + +G IH I + D VV +L EMY KCG +E A + ++ S
Sbjct: 379 GCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTAS 438
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR 368
WTSI+ G A++G+ +A ELF++M + V I++ +L+ + L +E F MR
Sbjct: 439 WTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMR 498
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 152/338 (44%), Gaps = 21/338 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P+ V + Y CG L++AR LF+ P RD W AM+ Y Q + LF
Sbjct: 300 PSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFR 359
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M V ++ ++L A+ + K +H I + + ++ ++L++ Y KC
Sbjct: 360 EMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCG 419
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ A +F ++ K+ SW I+ + G +A+ +F KM + +RP + TF L
Sbjct: 420 FIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLS 479
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLDQ-PDERN 309
ACS EG + ++++++ V G L ++ + G L +A L+ + PDE
Sbjct: 480 ACSHGGLVEEGRKFFNS-MRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENK 538
Query: 310 IIS---WTSIVSGYAISGRIREARELFNEMP--ERNVISWNAMLAG-YTRSLLWKEALDF 363
I+ + S++S I G + + ++ E + S + +LA Y + W++
Sbjct: 539 AITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWED---- 594
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
V +R+ KD+ + G S I++ +H F
Sbjct: 595 VTKVRRKMKDLG-------VKKTPGCSSIEVDSIIHEF 625
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 185/721 (25%), Positives = 318/721 (44%), Gaps = 106/721 (14%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y + Q C + +++ + ++ FY ++ + + Y KC L+ A LF
Sbjct: 28 IYGEILQGCVYERDFHTGQQIHARILKNGDFYAKNE-YIETKLVIFYAKCDALEIAEVLF 86
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
++ R+ SW A++G + G L F++M + + NV ++ G
Sbjct: 87 SKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRG 146
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +HG + K G V + SSL D YGKC V+ DAR++FD+I +N V+WN ++ Y+
Sbjct: 147 FGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYV 206
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +EA+ + M E + P T + L A + + EG Q H + + E D++
Sbjct: 207 QNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNI 266
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ S+ Y K G +E A +F+ M ++
Sbjct: 267 LGTSVLNFYCKVGLVE-------------------------------YAEMVFDRMVGKD 295
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V++WN +++GY + L ++A+ LMR D VTL +++ A K+GKEV
Sbjct: 296 VVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQC 355
Query: 401 FIHRNDYSSNIFVS-------------------------------NALLDMYRKCGNLRS 429
+ R+ + S+I ++ N LL Y + G
Sbjct: 356 YCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGE 415
Query: 430 ARIWFYQM---SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ----------WET--- 473
A FY+M S + ++WN ++ R GQ +EA F +MQ W T
Sbjct: 416 ALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMFLQMQSSGIVPTIVSWTTMMN 475
Query: 474 -----------------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYE 509
RP+ F+ L+ACAN++SL G+ +H ++IRN +
Sbjct: 476 GLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHS 535
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
+V +LV++Y KC + A +VF+ ++ + N+MI + EA+ ++ +
Sbjct: 536 SSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYRSL 595
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
GIKPD+ITF IL AC H G++ A++ F M K+G+ P LEHY M+ L G
Sbjct: 596 DDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGE 655
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNR 689
++ + MP+ P M++ + C K L E+ +++L E P + +N
Sbjct: 656 TEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNA 715
Query: 690 F 690
+
Sbjct: 716 Y 716
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 257/524 (49%), Gaps = 36/524 (6%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGN 177
+NG L L +M+ V Y +L+ E + +Q+H I+K G + N
Sbjct: 3 KNGEIKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYAKN 62
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+E+ LV Y KC + A +F ++ +N SW I+ G + A++ F +ML+
Sbjct: 63 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLK 122
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
++I P NF N AC L G +HG + K + V SL +MY KCG L+D
Sbjct: 123 DEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDD 182
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR ++F+E+PERNV++WNA++ GY ++ +
Sbjct: 183 AR-------------------------------KVFDEIPERNVVAWNALMVGYVQNGMN 211
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+EA+ + MR+ + +VT+ L+ A + ++ GK+ H N + + ++
Sbjct: 212 EEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSV 271
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
L+ Y K G + A + F +M + D V+WN +++GY ++G E+A+ M+ E +
Sbjct: 272 LNFYCKVGLVEYAEMVFDRMVGK-DVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFD 330
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T TL++ A + + GK++ C+ IR+ +E ++V V++Y KC + A +VF
Sbjct: 331 CVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFD 390
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ D+I+ N+++ + + EAL +F M+ E + P+ IT++ I+L+ + G V
Sbjct: 391 STVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDE 450
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
A + F M+ GI+P + + M+ + G +E ++ +M
Sbjct: 451 AKKMFLQMQSS-GIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKM 493
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/638 (28%), Positives = 309/638 (48%), Gaps = 40/638 (6%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTF---YPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L + C S + AR++ + ++T T + N I Y +CG+L+ AR +FD+M
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158
Query: 104 PERDGGSWNAMLGAYTQN-GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
P R+ S+NA+ AY++N F L M V N T+ ++++ A ++ +
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
L+ I+K G+ NV++++S++ Y C + ARR+FD + N++AV+WN ++ L
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
++ ++ F ML + P FT++ L CS L S G IH II D D +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY CG + REA +F + N++
Sbjct: 339 NALLDMYCSCGDM-------------------------------REAFYVFGRIHNPNLV 367
Query: 343 SWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
SWN++++G + + ++A L + L+R +T D+ T ++ A GK +HG
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + Y ++FV LL MY K SA+ F M +R D V W ++ G++R G SE
Sbjct: 428 VTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER-DVVLWTEMIVGHSRLGNSEL 486
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F EM E R F+ +++ AC++++ L QG+ HC IR ++ + GALV+
Sbjct: 487 AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVD 546
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y K E A +F +S+ D+ NSM+ + + +AL F + + G PD +T
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE-LEDFVNR 639
+ +L AC H G+ ++ M+ + GI +HY CM+ L + G + E LE
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P N + R + C +G +AA ++ +L+P
Sbjct: 666 PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDP 703
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 216/458 (47%), Gaps = 36/458 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S + L Q+CA + ++ L S ++ + V + + Y CG+L+ AR +FD
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ RD +WN M+ +N L F +M SGV Q TY+ VL ++ +
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +H I+ ++ L+++L+D Y C M +A +F I N N VSWN I+
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 223 GNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G G++A++M+ ++LR RP +TF+ A+ A + G +HG + K+ +E V
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM-PERN 340
+L MY K E A+ + D ER+++ WT ++ G++ G A + F EM E+N
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
RS D +L ++ C+ ++ ++ G+ H
Sbjct: 500 ------------RS--------------------DGFSLSSVIGACSDMAMLRQGEVFHC 527
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
R + + V AL+DMY K G +A F ++ D WN++L Y++ G E
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQHGMVE 586
Query: 461 EAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGK 497
+A++ F + ++ P T+ +LLAAC++ S QGK
Sbjct: 587 KALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 154/671 (22%), Positives = 282/671 (42%), Gaps = 95/671 (14%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY----T 119
+E++ YP + N I Y +C +L+ AR +FD+MP+R+ + + +
Sbjct: 13 VETDAAAEYP----YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSM 68
Query: 120 QNGFPGRTLEL-------FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+ + ++L F+ +N S ++T R L ++Q+H L++
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELT-----RKCVSITVLKRARQIHALVLTA 123
Query: 173 GFCGNVILES-----SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN-GK 226
G ES +L+ Y +C + AR++FD + ++N VS+N + Y +
Sbjct: 124 G--AGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFAS 181
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A + M E ++P + TF + + C+ L G ++ IIK+ + + VV S+
Sbjct: 182 YAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVL 241
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY CG LE AR + D + R+ ++W +++ G + +I + F M
Sbjct: 242 GMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM---------- 291
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+++G D Q T ++LN C+ L +GK +H I +D
Sbjct: 292 LMSGV---------------------DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+++ + NALLDMY CG++R A F ++ + VSWN++++G + G E+AM +
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMY 389
Query: 467 SEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ RP ++TF ++A A GK +H V + YE +V L+ +Y K
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
E A +VF DV++ MI+G A++ F M +E + D + +
Sbjct: 450 NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSV 509
Query: 585 LLAC-----IHEGNVKLALQFFDSMRCKYGII-------------------------PQL 614
+ AC + +G V L C + P L
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDL 569
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRM---PFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
+ + M+ Y ++G +++ F ++ F P + C G G++ +
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ 629
Query: 672 LNELNPWAPFQ 682
+ E A F+
Sbjct: 630 MKEQGIKAGFK 640
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 181/389 (46%), Gaps = 24/389 (6%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVIS---------WNAMLAGYTRSLLWKEALDFVF 365
+++S Y + +AR++F++MP+RN+++ + +M + ++ + +F
Sbjct: 27 NLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIF 86
Query: 366 LM--RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDM 420
M + + ++T C ++ +K +++H + + + + +N L+ M
Sbjct: 87 FMPLNEIASSVVELT-----RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ-SEEAMTSFSEMQWE-TRPSKF 478
Y +CG+L AR F +M R+ VS+NA+ + Y+R + A + M +E +P+
Sbjct: 142 YVRCGSLEQARKVFDKMPH-RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF +L+ CA + + G ++ +I+ Y NVV + +++ +Y+ C LE A R+F
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
++ D + N+MI+G N++ + L F M G+ P T+ +L C G+ L
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG- 319
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
+ + + L ++ +YC G M+E R+ NP + I C +
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSE 378
Query: 659 NGYATLGEWAARRLNELNPWAPFQFKITT 687
NG+ RRL ++ P ++ +
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN-AVLTGYARRGQS 459
F+ + + + +N L+ MY +C +L AR F +M QR + + + Y G S
Sbjct: 12 FVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS 71
Query: 460 EEA----MTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR---NCYEIN 511
+ + SF + + + L C +I+ L++ +QIH V+ +
Sbjct: 72 LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREALEVFGLMK 570
L+ +Y +C LE A +VF + +V+ N++ + N + A + M
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 571 KEGIKPDHITFHGILLAC 588
E +KP+ TF ++ C
Sbjct: 192 FEYVKPNSSTFTSLVQVC 209
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 269/528 (50%), Gaps = 37/528 (7%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH + +K +VI+ + +++ Y KC + +AR++FD++ +N VSW+ ++ Y G
Sbjct: 25 LHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGE 84
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+ +F K+ +I P + +A+ + AC+ L +G QIHG +K + V +
Sbjct: 85 PISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNA 141
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+KCG+ DA LL +NE E N +++
Sbjct: 142 LITMYMKCGKCSDA--LLA-----------------------------YNEALELNPVAY 170
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA++ G+ + + + + +M + D+ T +L C ++K G+ +H +
Sbjct: 171 NALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIK 230
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+S F+ N ++ MY K L A F + + +D +SWN ++ + E+A+
Sbjct: 231 LKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSI-EEKDLISWNTFISSCSHCNDHEKALE 289
Query: 465 SFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+F EM E RP +FTF + LAAC+ ++S+ GKQIH +IR +V AL+ +Y
Sbjct: 290 AFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMY 349
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC C+ A +F + +++ N+MI GF ++ G +A E+F MK G+KPD +TF
Sbjct: 350 AKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFV 409
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L A H G V L +F+SM YGI P++EH+ C+I L R G + E ++++ + PF
Sbjct: 410 GLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPF 469
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+L + CR +G G+ AR+L +L P + + +N +
Sbjct: 470 GHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLY 517
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 201/454 (44%), Gaps = 35/454 (7%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L L C+ +KA+ + L + + V + N + Y KC L +AR +FDEM
Sbjct: 5 LVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEM 64
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
ER+ SW+AM+ Y Q G P L LF +N + N+ YA+V+ + A L K
Sbjct: 65 SERNLVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGK 121
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HG +K G + ++L+ Y KC +DA +++ N V++N ++ ++
Sbjct: 122 QIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQ 181
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ + M ++ P FTF L C+ G +H IK+ +
Sbjct: 182 QPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGN 241
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+ MY K LE+A +E+++ISW + +S + +A E F EM
Sbjct: 242 LIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEM------- 294
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+ + D+ T L C+GL+ + GK++HG +
Sbjct: 295 -----------------------LNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLI 331
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R ++ NAL++MY KCG + A F +M + ++ VSWN ++ G+ G +A
Sbjct: 332 RTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKM-EHQNLVSWNTMIAGFGNHGFGGKAF 390
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
F++M+ +P TF LL A + +++G
Sbjct: 391 ELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEG 424
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 202/432 (46%), Gaps = 26/432 (6%)
Query: 27 TKTISGHLKSDEPVSY-------------SLYAHLFQLCASSKAIVEARKLESNLVTFYP 73
+ ISG+ + EP+S +YA + CAS K +V+ +++ + F
Sbjct: 73 SAMISGYEQIGEPISALGLFSKLNIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGL 132
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
F+ N I Y KCG DA ++E E + ++NA++ + +N P + E+
Sbjct: 133 DSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRM 192
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G ++ T+ +L + +L + LH +K + + ++ Y K +
Sbjct: 193 MYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNL 252
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALF 252
+ +A + F I+ K+ +SWN + + ++A+ F +ML E +RP FTFA+AL
Sbjct: 253 LEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALA 312
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS L+S G QIHG +I+ D +L MY KCG + A + + + +N++S
Sbjct: 313 ACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVS 372
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR 368
W ++++G+ G +A ELF +M V +++ +L + L E L + M
Sbjct: 373 WNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSME 432
Query: 369 KT---TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
+T + +I+ + ++++ + KE ++ + + + V +LL R G
Sbjct: 433 ETYGISPEIEHFS--CLIDLLGRAGRLNEAKE---YMKKFPFGHDTVVLGSLLSACRLHG 487
Query: 426 NLRSARIWFYQM 437
++ + + + Q+
Sbjct: 488 DVDTGKCFARQL 499
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+G +++ C+ ++ G +H + S++ VSN +L++Y KC LR AR F +MS
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQ 498
+ R+ VSW+A+++GY + G+ A+ FS++ P+++ + ++++ACA++ L QGKQ
Sbjct: 66 E-RNLVSWSAMISGYEQIGEPISALGLFSKLN--IVPNEYVYASVISACASLKGLVQGKQ 122
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH ++ + AL+ +Y KC A+ + E+ L+ + N++I GF N++
Sbjct: 123 IHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ EV +M ++G PD TF G+L C ++K
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLK 219
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 272/553 (49%), Gaps = 34/553 (6%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L F+ M+ +G T+ ++L+ A +L + +H + RG + ++L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNF 245
Y KC DARR+FD + ++ V+WN +V Y G + A+ M +M E+ RP +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
T + L AC+ + + H I+ E V ++ + Y KCG
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGD----------- 211
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
IR AR +F+ MP +N +SWNAM+ GY ++ +EAL
Sbjct: 212 --------------------IRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFN 251
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M + D+ V++ L C L + G VH + R SN+ V NAL+ MY KC
Sbjct: 252 RMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+ A F ++ RR +VSWNA++ G A+ G SE+A+ F+ MQ E +P FT +++
Sbjct: 312 RVDLASHVFDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
A A+IS Q + IH + IR + +V AL+++Y KC + A +F + VI
Sbjct: 371 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVI 430
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+MI G+ + G+ A+E+F MK GI P+ TF +L AC H G V ++F SM
Sbjct: 431 TWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSM 490
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
+ YG+ P +EHY M+ L R G + E F+ +MP +P + + + C+ + L
Sbjct: 491 KEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVEL 550
Query: 665 GEWAARRLNELNP 677
E +A+++ EL P
Sbjct: 551 AEESAQKIFELGP 563
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 224/462 (48%), Gaps = 34/462 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + L +LCA+ + R + + L Y KC DAR
Sbjct: 56 PPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARR 115
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEEL 157
+FD MP RD +WNA++ Y +NG +E+ + M G + IT +VL + A
Sbjct: 116 VFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANAR 175
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L ++ H ++ G V + ++++DAY KC + AR +FD + KN+VSWN ++
Sbjct: 176 ALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMID 235
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+ +EA+ +F +M+ E + + + AL AC L EGM++H ++++I +
Sbjct: 236 GYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDS 295
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V+ +L MY KC R++ A + D+ D R +SW +++ G A +G +A LF M
Sbjct: 296 NVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQ 355
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
NV D TL ++ A +S+ +
Sbjct: 356 LENVKP-------------------------------DSFTLVSVIPALADISDPLQARW 384
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG+ R +++V AL+DMY KCG + ARI F ++ R ++WNA++ GY G
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF-NSARERHVITWNAMIHGYGSHG 443
Query: 458 QSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
+ A+ F EM+ P++ TF ++L+AC++ +++G++
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 22/361 (6%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
Q C + E ++ LV V ++N I Y KC +D A +FDE+ R
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWNAM+ QNG + LF M V + T +V+ + A+ + ++ +HG
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++ +V + ++L+D Y KC + AR +F+ + ++ ++WN ++ Y G GK A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLT 286
V +F +M I P TF + L ACS EG + + +K D+ E G++
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMV 507
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARE----LFNEMPERNV 341
++ + G+L++A + + P + + + +++ + + A E +F P+ V
Sbjct: 508 DLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV 567
Query: 342 ISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
++ +LA Y + +WK+ M K L G S I++ E+H
Sbjct: 568 --YHVLLANIYANASMWKDVARVRTAMEKNG-----------LQKTPGWSIIQLKNEIHT 614
Query: 401 F 401
F
Sbjct: 615 F 615
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 193/685 (28%), Positives = 319/685 (46%), Gaps = 73/685 (10%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGF 123
S ++T + VF + + Y + LF + +D WN+++ ++ NG
Sbjct: 29 FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILES 182
R + +L M S NQ T V+ + AE + +HGL K G F GN + S
Sbjct: 89 YQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGS 148
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
S + Y KC + A MF +I K+ V+W ++ Y+ + F+M R P
Sbjct: 149 SFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTP 208
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
T + AC L + EG +HG+ +K F +VV ++ MY +CG E+A
Sbjct: 209 NYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCF 268
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNVISWNAM--------- 347
+ D++++ISWTSI++ ++ G + E LF EM P+ VIS M
Sbjct: 269 CKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIF 328
Query: 348 ---------------LAGYTRSLLWKEALDFVFL---------MRKTTKDIDQVTLGL-- 381
L+G T + L F L K+++D + LG
Sbjct: 329 EGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSN 388
Query: 382 -------------------------ILNVCAGLSEI---KMGKEVHGFIHRNDYSSNIFV 413
+++V + S++ +G+ +H + +N N+ V
Sbjct: 389 MGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSV 448
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
+N+L+DMY K G++ + F++ Q RD +SWN +++ Y + G EA+ F +M E
Sbjct: 449 ANSLMDMYGKSGHVTATWRIFHRTLQ-RDVISWNTLISSYKQSGILAEAIILFDKMVKEK 507
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
P+K T +L+ACA+++SL++G++IH ++ N +E N+ R AL+++Y KC LE +
Sbjct: 508 VYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSR 567
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
++F + DVI+ N MI + + A+E+F LM++ IKP+ TF +L AC H G
Sbjct: 568 KLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTG 627
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
+V FD M+ KYGI P L+HY +I L R G ++ E V MP P + +
Sbjct: 628 HVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSL 686
Query: 653 FDKCRKNGYATLGEWAARRLNELNP 677
C+ + +G AR E +P
Sbjct: 687 LSACKIHNEFEVGVRLARYAIESDP 711
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ AI R + + V + N ++ YGK G++ +F +RD SW
Sbjct: 421 CSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISW 480
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N ++ +Y Q+G + LF M V N++T VL + A L +++H I +
Sbjct: 481 NTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKE 540
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF N+ + ++L+D Y KC + +R++F+ + ++ + WNV++ Y + G+ + A+ +
Sbjct: 541 NGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEI 600
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F M +I+P TF + L AC+ EG + + K E S+ ++ +
Sbjct: 601 FQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGR 660
Query: 292 CGRLEDARGL-LDQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERN 340
G LE A L L P + W S++S I +R AR P+ +
Sbjct: 661 SGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKND 714
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/603 (29%), Positives = 308/603 (51%), Gaps = 43/603 (7%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
A++L + LV T +FL + I Y G++ AR FD++ +D +WN+M+ AY +
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 121 NGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
G ++ F + ++ S + ++ T+ V+R+ L +++H L++K GF +V
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECDVY 175
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ +S + Y + ++ A +FD++ ++ +WN ++ + + G EA+ +F +M +
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ + T ++ L C L G+ IH IK+ E D V +L MY K G L
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGEL---- 291
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
R A +FN+M R+++SWN++LA + ++
Sbjct: 292 ---------------------------RSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVI 324
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALL 418
AL M D +TL + +V A L + +HGF+ R + +I + NA++
Sbjct: 325 ALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAII 384
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PS 476
DMY K G + SAR F + + D +SWN+++TGY++ G + EA+ +S M++ + P+
Sbjct: 385 DMYAKLGFIDSARKVFEGLPVK-DVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPN 443
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+ T+ ++L A + + +L+QG + H +I+N ++ LV++Y KC L A+ +F
Sbjct: 444 QGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFY 503
Query: 537 ESSSLDVIICNSMILGFCHNERGR--EALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
E + N++I CH G +A+++F M+ EG+KPDHITF +L AC H G V
Sbjct: 504 EVPHQSSVSWNAIIS--CHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLV 561
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
F M+ YGI P L+HY CM+ L+ R G++++ +FV MP P V + +
Sbjct: 562 DEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLG 621
Query: 655 KCR 657
CR
Sbjct: 622 ACR 624
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 50/498 (10%)
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
++ ++KQLH L+V G ++ L + L++ Y + AR FD IQ K+ +WN ++
Sbjct: 55 KVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMIS 114
Query: 218 RYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G+ AV F + L ++ ++TF + AC L +G ++H +++K+ FE
Sbjct: 115 AYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFE 171
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + S Y + G + A L D R+I +W +++SG+ ++G++ EA E+F+EM
Sbjct: 172 CDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEM 231
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++V +D VT+ +L +C L +I G
Sbjct: 232 RFKSV-------------------------------SMDSVTISSLLPICVQLDDIISGV 260
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H + + ++FV NAL++MY K G LRSA F QM + RD VSWN++L + +
Sbjct: 261 LIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQM-KVRDIVSWNSLLAAFEQN 319
Query: 457 GQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
+ A+ +++M P T +L + A + + + IH FV R C+ ++ +
Sbjct: 320 KKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIAL 379
Query: 516 G-ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK-KEG 573
G A++++Y K ++ A +VF+ DVI NS+I G+ N EA++V+ M+ G
Sbjct: 380 GNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSG 439
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE-----CMIKLYCRYG 628
P+ T+ IL A G +K M+ +I +++ C++ +Y + G
Sbjct: 440 AVPNQGTWVSILTAHSQLGALK------QGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCG 493
Query: 629 YMKELEDFVNRMPFNPTV 646
+ + +P +V
Sbjct: 494 KLADALSLFYEVPHQSSV 511
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 29/270 (10%)
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+++ + K++H + + + +IF+S L++ Y G++ AR+ F Q+ Q +D +WN++
Sbjct: 54 TKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQI-QTKDVYTWNSM 112
Query: 450 LTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ YAR G A+ F+E + + +TF ++ AC N L+ G+++HC V++
Sbjct: 113 ISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLG 169
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+E +V + + Y++ + A +F D+ N+MI GF N + EALEVF
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229
Query: 568 LMKKEGIKPDHITFHGILLAC-----------IHEGNVKLALQFFDSMRCKYGIIPQLEH 616
M+ + + D +T +L C IH +KL L+ FD C
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLE-FDLFVC---------- 278
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+I +Y ++G ++ E N+M V
Sbjct: 279 -NALINMYAKFGELRSAETIFNQMKVRDIV 307
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
A+ + K L+ + +F+ ++ YGKCG L DA LF E+P + SWNA++
Sbjct: 459 ALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIIS 518
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+ +G+ + ++LF +M GV + IT+ ++L + +
Sbjct: 519 CHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSH 557
>gi|413941642|gb|AFW74291.1| hypothetical protein ZEAMMB73_987423 [Zea mays]
Length = 671
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 253/484 (52%), Gaps = 3/484 (0%)
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
A WN+++ Y G + ++ + KML + FT+ + L C L G I
Sbjct: 113 AFPWNLLIWGYADRGLWDDVILAYQKMLALGVAADRFTYPSVLRTCGELRDSAIGRGIEK 172
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I+ + D V +L MY KCG ++DAR + D R+++SW S+VSGY +G E
Sbjct: 173 RILTWRYGLDMYVWNALVGMYAKCGEMKDARRVFDGMPARDVVSWNSMVSGYVSAGMWGE 232
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT-KDIDQVTLGLILNVCA 387
A +L +P N+++WNA++AG ++ + E + V MR +D VT+ + L CA
Sbjct: 233 AFDLLQLVPGANIVAWNAVVAGNFKAGNYGEVMRLVSQMRTCGGPGLDFVTVVIGLRACA 292
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+++GKE+H R + V ++L+ MY +C +RSA + F S + V+WN
Sbjct: 293 RGGYLRIGKELHAASVRLCFDRLERVESSLITMYSRCQMMRSAYLLFRTCSTQ-SIVTWN 351
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++L G+ Q EEA+ F EM + + P+ T T+L+ A L G+++HC++ ++
Sbjct: 352 SLLAGFGFMDQVEEAIFVFREMIYSSVFPNDVTVLTMLSLSARFGHLCHGREMHCYIFKH 411
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ + + +LV++Y+K + A RVF + D S+ILG+ G +L++F
Sbjct: 412 GLGASNILQNSLVDMYSKSGQMATANRVFDQMQCQDRHAYTSLILGYGMQREGHLSLKLF 471
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M IK DH+T +L AC H G V F M + I P++EH+ CM+ LYCR
Sbjct: 472 DEMIVNNIKVDHVTMVAVLSACSHSGLVAQGQLRFAQMYDVFCIAPRVEHFSCMVDLYCR 531
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G + E+ VN+MPF PT ML + + CR +G +G+ AA+RL + P +K+
Sbjct: 532 EGLLSMAEEIVNKMPFQPTAAMLATLIEACRIHGKTEIGDRAAKRLLAMRTNNPGHYKLI 591
Query: 687 TNRF 690
N +
Sbjct: 592 ANMY 595
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 196/446 (43%), Gaps = 71/446 (15%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ Y G + + M GV+A++ TY +VLR+ E + + + + I+
Sbjct: 116 WNLLIWGYADRGLWDDVILAYQKMLALGVAADRFTYPSVLRTCGELRDSAIGRGIEKRIL 175
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA-- 228
+ ++ + ++LV Y KC M DARR+FD + ++ VSWN +V Y+ AG EA
Sbjct: 176 TWRYGLDMYVWNALVGMYAKCGEMKDARRVFDGMPARDVVSWNSMVSGYVSAGMWGEAFD 235
Query: 229 ---------VVMFFKMLREDIRPLNF---------------------TFANALFACSFLS 258
+V + ++ + + N+ T L AC+
Sbjct: 236 LLQLVPGANIVAWNAVVAGNFKAGNYGEVMRLVSQMRTCGGPGLDFVTVVIGLRACARGG 295
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G ++H +++ F+ + V SL MY +C + A L ++I++W S+++
Sbjct: 296 YLRIGKELHAASVRLCFDRLERVESSLITMYSRCQMMRSAYLLFRTCSTQSIVTWNSLLA 355
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G+ ++ EA +F EM +V + VT
Sbjct: 356 GFGFMDQVEEAIFVFREMIYSSVFP-------------------------------NDVT 384
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ +L++ A + G+E+H +I ++ ++ + N+L+DMY K G + +A F QM
Sbjct: 385 VLTMLSLSARFGHLCHGREMHCYIFKHGLGASNILQNSLVDMYSKSGQMATANRVFDQM- 443
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
Q +D+ ++ +++ GY + + ++ F EM + T +L+AC++ + QG+
Sbjct: 444 QCQDRHAYTSLILGYGMQREGHLSLKLFDEMIVNNIKVDHVTMVAVLSACSHSGLVAQGQ 503
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYT 523
+R +V C VE ++
Sbjct: 504 ------LRFAQMYDVFCIAPRVEHFS 523
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 32/329 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + R +E ++T+ +++ N + Y KCG + DAR +FD MP
Sbjct: 151 YPSVLRTCGELRDSAIGRGIEKRILTWRYGLDMYVWNALVGMYAKCGEMKDARRVFDGMP 210
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANV-------------- 149
RD SWN+M+ Y G G +L + + + A N + N
Sbjct: 211 ARDVVSWNSMVSGYVSAGMWGEAFDLLQLVPGANIVAWNAVVAGNFKAGNYGEVMRLVSQ 270
Query: 150 -----------------LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
LR+ A L + K+LH V+ F +ESSL+ Y +C
Sbjct: 271 MRTCGGPGLDFVTVVIGLRACARGGYLRIGKELHAASVRLCFDRLERVESSLITMYSRCQ 330
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+M A +F ++ V+WN ++ + +EA+ +F +M+ + P + T L
Sbjct: 331 MMRSAYLLFRTCSTQSIVTWNSLLAGFGFMDQVEEAIFVFREMIYSSVFPNDVTVLTMLS 390
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ G ++H I K +++ SL +MY K G++ A + DQ ++ +
Sbjct: 391 LSARFGHLCHGREMHCYIFKHGLGASNILQNSLVDMYSKSGQMATANRVFDQMQCQDRHA 450
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNV 341
+TS++ GY + + +LF+EM N+
Sbjct: 451 YTSLILGYGMQREGHLSLKLFDEMIVNNI 479
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 12/271 (4%)
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L ++ C + G++ H ++ V L Y G+L +A+ + +
Sbjct: 49 LSSLIRYCTTKRARRPGEQAHARAVALGLGAHPSVLPGLASFYIALGDLPAAQASVERAA 108
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
+ WN ++ GYA RG ++ + ++ +M +FT+ ++L C + G+
Sbjct: 109 GKARAFPWNLLIWGYADRGLWDDVILAYQKMLALGVAADRFTYPSVLRTCGELRDSAIGR 168
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
I ++ Y +++ ALV +Y KC ++ A RVF + DV+ NSM+ G+
Sbjct: 169 GIEKRILTWRYGLDMYVWNALVGMYAKCGEMKDARRVFDGMPARDVVSWNSMVSGYVSAG 228
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
EA ++ L+ I + ++ ++ GN ++ MR G P L+
Sbjct: 229 MWGEAFDLLQLVPGANI----VAWNAVVAGNFKAGNYGEVMRLVSQMRTCGG--PGLDFV 282
Query: 618 ECMIKLY--CRYGYM---KELEDFVNRMPFN 643
+I L R GY+ KEL R+ F+
Sbjct: 283 TVVIGLRACARGGYLRIGKELHAASVRLCFD 313
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 267/531 (50%), Gaps = 44/531 (8%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+H I+++G + + S + + +F+ + + + V WN ++ Y
Sbjct: 42 EQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSEN 101
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+ V +F +M R D P FT+ + + ACS + EG+ HG ++ GD V+
Sbjct: 102 YSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVM 161
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL ++Y KCG + AR + D+ ERN++SWT++++GYA + EAR+LF+EMPE+N +
Sbjct: 162 TSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAV 221
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL-SEIKMGKEVHGF 401
SWNA+++GY + C L S KM E+
Sbjct: 222 SWNAIISGYVK--------------------------------CGDLRSARKMFDEMP-- 247
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
HRN + ++D Y K G++ SAR F + +R D V+W+A+++GY + GQ E
Sbjct: 248 -HRN-----VVSFTTMIDGYAKSGDMASARFVFEEAPER-DVVAWSALISGYVQNGQPNE 300
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV-CRGALV 519
A+ F EM +P +F +L++AC+ + SLE K + +V ++ +++ AL+
Sbjct: 301 AVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALI 360
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++ KC ++ A ++F+E D+I SM+ G + G +A+ +F M EG+ PD +
Sbjct: 361 DMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDV 420
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
F IL AC G V +F+SM+ Y I+P +HY CM+ L R G +KE + +
Sbjct: 421 AFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKS 480
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + C+ + LGE A +L EL P + + +N +
Sbjct: 481 MPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIY 531
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 202/421 (47%), Gaps = 42/421 (9%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F++++ + N +F+ + WN + Y++N T+ LF+ M S
Sbjct: 58 FIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRS 117
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
++ TY +++++ ++ + HG V+ G G+V + +SL+D YGKC + A
Sbjct: 118 DAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCA 177
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD++ +N VSW ++ Y + EA +F +M
Sbjct: 178 RKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMP--------------------- 216
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
E + V ++ YVKCG L AR + D+ RN++S+T+++
Sbjct: 217 ------------------EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMI 258
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
GYA SG + AR +F E PER+V++W+A+++GY ++ EA+ M D+
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEF 318
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSARIWFYQ 436
+ +++ C+ + +++ K V ++ ++ + V AL+DM KCG++ A F +
Sbjct: 319 IMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEE 378
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M +RD +S+ +++ G + G +A++ FS M E P F +L AC+ +++
Sbjct: 379 M-PKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 437
Query: 496 G 496
G
Sbjct: 438 G 438
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 157/331 (47%), Gaps = 13/331 (3%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+SD Y L + C+ + E + V VF++ I+ YGKCG +
Sbjct: 116 RSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEIL 175
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
AR +FDEM ER+ SW AM+ Y +LF +M N +++ ++
Sbjct: 176 CARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEK----NAVSWNAIISGYV 231
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+ +L ++++ + R NV+ ++++D Y K M AR +F++ ++ V+W+
Sbjct: 232 KCGDLRSARKMFDEMPHR----NVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSA 287
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y+ G EAV +F +M +++P F + + ACS + S + + K
Sbjct: 288 LISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSS 347
Query: 275 FEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ V+ +L +M KCG ++ A L ++ +R++IS+ S++ G +I G +A LF
Sbjct: 348 IDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLF 407
Query: 334 NEMPERNV----ISWNAMLAGYTRSLLWKEA 360
+ M + +++ +L +R+ L E
Sbjct: 408 SRMLNEGLTPDDVAFTVILTACSRAGLVDEG 438
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P V I+ Y K G++ AR +F+E PERD +W+A++ Y QNG P +++FL
Sbjct: 247 PHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFL 306
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVILESSLVDAYGKC 191
+M V ++ +++ + ++ L ++K + + K + ++L+D KC
Sbjct: 307 EMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKC 366
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
M A ++F+++ ++ +S+ +++ + G G +AV +F +ML E + P + F L
Sbjct: 367 GSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVIL 426
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
ACS EG + +K D+ ++ PD
Sbjct: 427 TACSRAGLVDEGCY-YFESMKTDYS------------------------IVPSPDH---- 457
Query: 312 SWTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLAG 350
+ +V +GR++EA EL MP E + +W A+L
Sbjct: 458 -YACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGA 496
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
+ TLL AC S+LE Q+H +IR + + + Y VF
Sbjct: 27 SISTLLKACTTTSTLE---QVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGV 83
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
SS ++ N+ I G+ N + +F MK+ PD T+ ++ AC VK +
Sbjct: 84 SSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGV 143
Query: 599 QFFDS-MRCKYG 609
F S +RC G
Sbjct: 144 AFHGSAVRCGVG 155
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/568 (27%), Positives = 284/568 (50%), Gaps = 70/568 (12%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD---ARRMFDDIQNKNAVSWNVIVRRY 219
K+LH +V G S ++ +Y + +D A ++F+ I++ WN ++R
Sbjct: 328 KKLHAHLVVSGLHNCQYAMSKVIRSYA--LQQSDLVFAHKVFEQIESPTTFLWNTLLRGL 385
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ K+A+V + K + ++P N TF L AC+ +P EG Q+H +IK+ F D
Sbjct: 386 AQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDI 445
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V SL +Y CG L AR +F+EM +
Sbjct: 446 FVSNSLIHLYAACGDLVCARS-------------------------------IFDEMLVK 474
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V+SWN+++ GY++ +KE L LM+ D+VT+ +++ C L + M +
Sbjct: 475 DVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMV 534
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------- 440
+I RN ++++ N L+D Y + G L+SA F QM +
Sbjct: 535 RYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLV 594
Query: 441 -----------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACA 488
+D +SW++++ Y++ +++ F +MQ + +P ++L+ACA
Sbjct: 595 SAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACA 654
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
++ +L+ GK IH +V RN + + + +L++++ KC C++ A++VF E D + NS
Sbjct: 655 HLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNS 714
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+ILG +N EAL +F M EG +P+ +TF G+L+AC ++ V+ L F+ M+ +
Sbjct: 715 IILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVH 774
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
+ PQ++HY C++ + R G +++ ++F+N MP P + R + C+ +G + E A
Sbjct: 775 NLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVA 834
Query: 669 ARRLNELNPWAPFQFKITTNRF---DRY 693
++L+EL+P + + +N + DR+
Sbjct: 835 TKKLSELDPSNSGDYMLLSNIYASADRW 862
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 230/437 (52%), Gaps = 3/437 (0%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYG-KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
+KL ++LV + +++ I Y + +L A +F+++ WN +L Q
Sbjct: 328 KKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQ 387
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
+ P + + G+ + +T+ VL++ A+ +Q+H ++K GF ++ +
Sbjct: 388 SDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFV 447
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
+SL+ Y C + AR +FD++ K+ VSWN ++ Y KE + +F M E++
Sbjct: 448 SNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEV 507
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+ T + AC+ L + I + E D + +L + Y + G+L+ A
Sbjct: 508 QADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEK 567
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ Q ++N ++ +++ YA G + A+++F+++P +++ISW++M+ Y+++ + ++
Sbjct: 568 VFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDS 627
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
L+ M++ D V + +L+ CA L + +GK +H ++ RN+ ++ + N+L+DM
Sbjct: 628 LELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDM 687
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
+ KCG ++ A F +M + +D +SWN+++ G A G +EA+ F M E RP++ T
Sbjct: 688 FAKCGCMQEALQVFTEM-EEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVT 746
Query: 480 FETLLAACANISSLEQG 496
F +L ACAN +++G
Sbjct: 747 FLGVLIACANKRLVQEG 763
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 156/599 (26%), Positives = 281/599 (46%), Gaps = 43/599 (7%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P V N I + G ++ AR LFD+MP R+ SW ++ YT+ + LF
Sbjct: 2 PMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFR 61
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+S ++IT V+ + + + + + LHG VK+G + + +SL+D Y K
Sbjct: 62 HMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIG 121
Query: 193 VMTDARRMFDD-IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ ++ ++FD+ + +N VSW I+ + + G EA+ +F +M R IRP TF + +
Sbjct: 122 SVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVI 181
Query: 252 FACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERN 309
ACS +G+ ++ + + + + G + +M + GRL +A +++ P E N
Sbjct: 182 NACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVN 241
Query: 310 IISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSL-LWKEALDFVF 365
+I W ++ + G + + A ++ +++ ER A+L+ L + +A
Sbjct: 242 VIVWRILLGCCSKYGEVEMGKRAIKMISDL-ERESGGDFAVLSNVLNELGRFSDAEQARK 300
Query: 366 LM--RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF-----IHRNDYS-SNIFVSNAL 417
L+ RK K GL L V ++ K++H +H Y+ S + S AL
Sbjct: 301 LLDERKIVK-----VPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYAL 355
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+ +L A F Q+ + WN +L G A+ ++A+ + + Q + +P
Sbjct: 356 -----QQSDLVFAHKVFEQI-ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPD 409
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
TF +L ACA + ++G+Q+H VI+ + +++ +L+ +Y C L A +F
Sbjct: 410 NMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFD 469
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
E DV+ NS+I G+ R +E L +F LM+ E ++ D +T ++ AC H G+ +
Sbjct: 470 EMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSM 529
Query: 597 ALQFFDSMRCKYGIIPQLEHYEC-------MIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
A C I + H E +I YCR G ++ E ++M TV +
Sbjct: 530 A-------DCMVRYIER-NHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTL 580
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 200/432 (46%), Gaps = 41/432 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + CA + A E ++ S+++ +F+ N I Y CG+L AR +FDEM
Sbjct: 413 FPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEML 472
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SWN+++G Y+Q L LF M V A+++T V+ + + ++
Sbjct: 473 VKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADC 532
Query: 165 LHGLIVKRGFCGNVILESSLVD-------------------------------AYGKCMV 193
+ I + +V L ++L+D AY K
Sbjct: 533 MVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGN 592
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A+++FD I NK+ +SW+ ++ Y A + +++ +F +M R ++P A+ L A
Sbjct: 593 LVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSA 652
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L + G IH + + + + D ++ SL +M+ KCG +++A + + +E++ +SW
Sbjct: 653 CAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSW 712
Query: 314 TSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
SI+ G A +G EA +F M P N +++ +L L +E LD F K
Sbjct: 713 NSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDH-FERMK 771
Query: 370 TTKDIDQVT--LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
T +++ G ++ + + +++ K FI+ + + V LL + GN+
Sbjct: 772 TVHNLEPQMKHYGCVVGILSRAGQLEKAK---NFINEMPLAPDPVVWRILLGACKTHGNV 828
Query: 428 RSARIWFYQMSQ 439
A + ++S+
Sbjct: 829 AVAEVATKKLSE 840
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 3/281 (1%)
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
N+ N ++ + G + AR+ F QM R + VSW ++ GY R EA+ F M
Sbjct: 5 NVVSWNVVITGFAGWGEIEYARLLFDQMPCR-NVVSWTGLIDGYTRACLYAEAVALFRHM 63
Query: 470 Q-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
PS+ T ++ A +N+ + G+ +H + ++ + +L+++Y K +
Sbjct: 64 MAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSV 123
Query: 529 EYAIRVFKES-SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+ +++VF E +++ S+I GF + EALE+F M++ GI+P+ ITF ++ A
Sbjct: 124 QNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINA 183
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C H G V+ L FF SM +Y I P+++H+ C+I + R G + E E + +P V
Sbjct: 184 CSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVI 243
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ R + C K G +G+ A + +++L + F + +N
Sbjct: 244 VWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSN 284
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 160/338 (47%), Gaps = 28/338 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QL ++ K + + + N VT LN I Y K GNL A+ +FD++P
Sbjct: 556 YCRIGQLQSAEKVFSQMK--DKNTVT---------LNAMIHAYAKGGNLVSAKKIFDQIP 604
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SW++M+ AY+Q +LELF M + V + + A+VL + A L + K
Sbjct: 605 NKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKW 664
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H + + + I+E+SL+D + KC M +A ++F +++ K+ +SWN I+ G
Sbjct: 665 IHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGF 724
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-------IHGVIIKIDFEG 277
EA+ +F+ ML E RP TF L AC+ EG+ +H + ++ G
Sbjct: 725 EDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYG 784
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELF 333
V+G L+ + G+LE A+ +++ P + + W ++ G + A +
Sbjct: 785 --CVVGILS----RAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKL 838
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+E+ N + + Y + W +AL+ M T
Sbjct: 839 SELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTA 876
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 276/550 (50%), Gaps = 39/550 (7%)
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN- 206
++L ++A+ L + Q+H +V ++ ++L+ Y KC + +F+ +
Sbjct: 102 HLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHP 161
Query: 207 -KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
N V+W ++ + + +A+ F +M I P +FTF+ L AC+ + EG Q
Sbjct: 162 STNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQ 221
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IH +I K F D V +L +MY KCG + LL
Sbjct: 222 IHALIHKHCFLNDPFVATALLDMYAKCGSM-----LL----------------------- 253
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT-TKDIDQVTLGLILN 384
A +F+EMP RN++SWN+M+ G+ ++ L+ A+ + R+ + DQV++ +L+
Sbjct: 254 ---AENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIG---VFREVLSLGPDQVSISSVLS 307
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CAGL E+ GK+VHG I + ++V N+L+DMY KCG A F R D V
Sbjct: 308 ACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDR-DVV 366
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+WN ++ G R E+A T F M E P + ++ +L A A+I++L QG IH V
Sbjct: 367 TWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHV 426
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ + N +LV +Y KC + A +VF+E+ +V+ +MI F + EA+
Sbjct: 427 LKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAI 486
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++F M EG+ P++ITF +L AC H G + ++F+SM + I P LEHY CM+ L
Sbjct: 487 KLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDL 546
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G ++E F+ MPF P + + C K+ +G A RL +L P P +
Sbjct: 547 LGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNY 606
Query: 684 KITTNRFDRY 693
+ +N + R+
Sbjct: 607 MLLSNIYIRH 616
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 212/453 (46%), Gaps = 37/453 (8%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
HL A K++ A ++ S LVT + +N + Y KCG++ LF+ P
Sbjct: 102 HLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHP 161
Query: 107 DGG--SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+W ++ +++ P + L F M +G+ N T++ +L + A L +Q
Sbjct: 162 STNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQ 221
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H LI K F + + ++L+D Y KC M A +FD++ ++N VSWN ++ ++
Sbjct: 222 IHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKL 281
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+ +F ++L + P + ++ L AC+ L G Q+HG I+K G V S
Sbjct: 282 YGRAIGVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNS 339
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KCG EDA L +R++ ++W
Sbjct: 340 LVDMYCKCGLFEDATKLFCGGGDRDV-------------------------------VTW 368
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
N M+ G R +++A + M + + D+ + + + A ++ + G +H + +
Sbjct: 369 NVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLK 428
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ N +S++L+ MY KCG++ A F + ++ + V W A++T + + G + EA+
Sbjct: 429 TGHVKNSRISSSLVTMYGKCGSMLDAYQVFRE-TKEHNVVCWTAMITVFHQHGCANEAIK 487
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
F EM E P TF ++L+AC++ ++ G
Sbjct: 488 LFEEMLNEGVVPEYITFVSVLSACSHTGKIDDG 520
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 215/460 (46%), Gaps = 10/460 (2%)
Query: 7 TILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLES 66
T L N LS+S+ P + LT P ++ A + CA + + E +++ +
Sbjct: 169 TTLINQLSRSN---KPFQALTFFNRMRTTGIYPNHFTFSA-ILPACAHAALLSEGQQIHA 224
Query: 67 NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
+ F+ ++ Y KCG++ A +FDEMP R+ SWN+M+ + +N GR
Sbjct: 225 LIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGR 284
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
+ +F ++ G +Q++ ++VL + A +EL KQ+HG IVKRG G V +++SLVD
Sbjct: 285 AIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVD 342
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + DA ++F +++ V+WNV++ N ++A F M+RE + P +
Sbjct: 343 MYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEAS 402
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
+++ A + +++ +G IH ++K + + SL MY KCG + DA + +
Sbjct: 403 YSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETK 462
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E N++ WT++++ + G EA +LF EM V+ + +D F
Sbjct: 463 EHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFK 522
Query: 367 MRKTTKDIDQVTLGLILNVCAG--LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
+ ++ + GL C L + +E FI + + V ALL K
Sbjct: 523 YFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKH 582
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQSEEA 462
N+ R ++ + N +L Y R G EEA
Sbjct: 583 ANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEA 622
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/615 (28%), Positives = 302/615 (49%), Gaps = 44/615 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + Y +CG + AR +FD M RD SW AM +NG +L L +M SG+
Sbjct: 88 NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGL 147
Query: 140 SANQITYANVLRSS-AEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDA 197
N T V + EL V + GL+ K G G ++ + S+L+D + + A
Sbjct: 148 LPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASA 207
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD + K V W +++ RY+ +EAV +F L + P +T ++ + AC+ L
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTEL 267
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S G+Q+H + +++ F D V L +MY K
Sbjct: 268 GSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN------------------------ 303
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF--LMRKTTKDID 375
I + A ++F M + +VISW A+++GY +S + + + +F ++ ++ K +
Sbjct: 304 ----IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKP-N 358
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T IL CA +S+ G++VH + +++ ++ V NAL+ MY + G + AR F
Sbjct: 359 HITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFN 418
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ 495
Q+ +R S + +T + +A + + S TF +L++A A++ L +
Sbjct: 419 QLYER----SMISCIT------EGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTK 468
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+Q+H ++ + + +LV +Y++C LE A R F E +VI SMI G
Sbjct: 469 GQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAK 528
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ AL +F M G+KP+ +T+ +L AC H G V+ ++F SM+ +G+IP++E
Sbjct: 529 HGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRME 588
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G +KE +F+N MP + + + CR + +GE AA+ + EL
Sbjct: 589 HYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIEL 648
Query: 676 NPWAPFQFKITTNRF 690
P P + + +N +
Sbjct: 649 EPRDPAPYVLLSNLY 663
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 236/519 (45%), Gaps = 63/519 (12%)
Query: 158 ELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVI 215
+L + + LH +++ + ++ +SL+ Y +C + AR +FD ++ ++ VSW +
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-----GMQIHGVI 270
G +E++++ +ML + P +T AC P+E G + G++
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC----FPHELYCLVGGVVLGLV 178
Query: 271 IKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
K+ G D+ +GS L +M + G L AR + D E+ ++ WT ++S Y EA
Sbjct: 179 HKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEA 238
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
E+F LDF+ + + D+ T+ +++ C L
Sbjct: 239 VEIF---------------------------LDFL----EDGFEPDRYTMSSMISACTEL 267
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW---FYQMSQRRDKVSW 446
+++G ++H R ++S+ VS L+DMY K N+ A + ++ ++ D +SW
Sbjct: 268 GSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIEQAMDYANKVFERMRKNDVISW 326
Query: 447 NAVLTGYARRG-QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVI 504
A+++GY + G Q + M F EM E+ +P+ T+ ++L ACANIS + G+Q+H VI
Sbjct: 327 TALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVI 386
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
++ ALV +Y + C+E A RVF + +I C + GR+A
Sbjct: 387 KSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCIT---------EGRDAPL 437
Query: 565 VFGLMKKE-GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+ + + GI TF ++ A G + Q +M K G ++ +
Sbjct: 438 DHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQLH-AMTLKAGFGSDRFVSNSLVSM 494
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
Y R GY+++ N + + V + K+GYA
Sbjct: 495 YSRCGYLEDACRSFNELK-DRNVISWTSMISGLAKHGYA 532
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+ D +S S +A L AS + + ++L + + F+ N + Y +CG L+
Sbjct: 443 RMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLE 502
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
DA F+E+ +R+ SW +M+ ++G+ R L LF DM +GV N +TY VL +
Sbjct: 503 DACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSA 560
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 292/619 (47%), Gaps = 101/619 (16%)
Query: 69 VTFYP---TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
V F P TP V N I + GN++ AR F+ MP R S+NA+L Y +N P
Sbjct: 6 VRFLPSSSTPAVVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPD 65
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL------IVKRGFCGNVI 179
L +F M + N L S G+S + H L + + +V+
Sbjct: 66 AALRVFHRM-----PTRDLASYNALIS-------GLSLRRHTLPDAAAALATIPYPPSVV 113
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+SL+ Y + ++ DA ++F + +N +S+ V++ +L AG EA +F +M +D
Sbjct: 114 SFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKD 173
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ V ++ Y + GR+++AR
Sbjct: 174 V---------------------------------------VAWTAMLSGYCQVGRVDEAR 194
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L D+ +RN++SWT++VSGYA +G++ AR+LF MPERN +SW AML GY ++ ++
Sbjct: 195 TLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIED 254
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A + M L C G+ + GF +
Sbjct: 255 AEELFNAMPDHP-----------LAACNGM--------IVGFGQQ--------------- 280
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKF 478
G + +A+ F +M +R D +W+A++ Y + EA+++F EM RP+
Sbjct: 281 -----GMVDAAKSVFDRMCERDDG-TWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYP 334
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
+ ++L CA ++ L+ G+++H ++R +++++ AL+ +Y KC L+ A RVF
Sbjct: 335 SVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMF 394
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
DV++ NSMI G+ + G EAL +F M+ G+ PD IT+ G L AC + G VK
Sbjct: 395 EPKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGR 454
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
F+SMR K GI P LEHY CM+ L R G + E + MP P + + CR
Sbjct: 455 DIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRM 514
Query: 659 NGYATLGEWAARRLNELNP 677
+ A + E +A++L EL P
Sbjct: 515 HKNAEIAEISAKKLLELEP 533
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 141/281 (50%), Gaps = 16/281 (5%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ EARKL + P V + Y + G +D+AR LFDEMP+R+ SW AM+
Sbjct: 159 VDEARKLFDEM----PAKDVVAWTAMLSGYCQVGRVDEARTLFDEMPKRNVVSWTAMVSG 214
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF--C 175
Y QNG +LF M N++++ +L + + +++L + C
Sbjct: 215 YAQNGQVNLARKLFEVMPER----NEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAAC 270
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+I+ +G+ ++ A+ +FD + ++ +W+ I++ Y EA+ F +M
Sbjct: 271 NGMIV------GFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFREM 324
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
L IRP + + L C+ L+ G ++HG +++ F+ D + +L MY+KCG L
Sbjct: 325 LHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNL 384
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ A+ + + ++++ W S+++GYA G EA +F++M
Sbjct: 385 DKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDM 425
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 166/355 (46%), Gaps = 28/355 (7%)
Query: 59 VEARKLES--NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
++A ++E L P P+ N I +G+ G +D A+ +FD M ERD G+W+A++
Sbjct: 247 IQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIK 306
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
AY QN F L F +M H G+ N + ++L A L +++HG +++R F
Sbjct: 307 AYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDM 366
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
++ S+L+ Y KC + A+R+F + K+ V WN ++ Y G G+EA+ +F M
Sbjct: 367 DIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMR 426
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-----IKIDFEGDDVVLGSLTEMYVK 291
+ P T+ AL ACS+ EG I + IK E + ++ +
Sbjct: 427 LAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEH----YACMVDLLGR 482
Query: 292 CGRLEDARGLLD-QPDERNIISWTSIVSGYAI--SGRIRE--ARELFNEMPERNVISWNA 346
G +++A L+ P E + + W +++ + + I E A++L E+ N +
Sbjct: 483 AGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLL-ELEPGNAGPYVL 541
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ YT S W++A + MRK LN G S I+ K VH F
Sbjct: 542 LSHIYTSSGRWEDASN----MRKFISSRH-------LNKSLGCSWIEYDKRVHLF 585
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%), Gaps = 4/199 (2%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +CA+ + R++ ++ ++ ++ I Y KCGNLD A+ +F +D
Sbjct: 339 ILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKD 398
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL-H 166
WN+M+ Y Q+G L +F DM +G+ + ITY L + + ++ + + +
Sbjct: 399 VVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFN 458
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGNG 225
+ K G + + +VD G+ ++ +A + + +AV W ++ + N
Sbjct: 459 SMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNA 518
Query: 226 KEAVVMFFKMLREDIRPLN 244
+ A + K+L ++ P N
Sbjct: 519 EIAEISAKKLL--ELEPGN 535
>gi|414589059|tpg|DAA39630.1| TPA: hypothetical protein ZEAMMB73_362613 [Zea mays]
Length = 692
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 249/486 (51%), Gaps = 8/486 (1%)
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+NV++ L G A+ + +M+ +D + P FT+ L AC+ + G +H
Sbjct: 126 YNVLISNCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVRA 185
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+ +G +L MY KC L AR + D + R+++SW S++SGYA SG+ R+A
Sbjct: 186 VDAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAV 245
Query: 331 ELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
ELF M E N ++WN + GY + ++ A+ + M + ID VTL + N C
Sbjct: 246 ELFLRMQAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNAC 305
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ +++GKE+HG R V NA++ MY +C ++ A + F +M + V+W
Sbjct: 306 SRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMERALMLF-KMIRCPGLVAW 364
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
N + G+A +E A F EM + +P+ T T LA CA +++L+ G+++H ++
Sbjct: 365 NTTIAGFALLDDAEAASRLFREMVVCGDVQPNYVTVVTYLALCARVANLQHGRELHTHIV 424
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ + +L+++Y+K L A VF D+I SMI G+ +G +L
Sbjct: 425 KQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMISFTSMIAGYGMQGKGIISLR 484
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
F M GI PD I +L AC H G V + FD M YGI PQ+EHY CM+ LY
Sbjct: 485 FFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKMVKSYGIKPQMEHYSCMVDLY 544
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFK 684
R G +++ E+ +N+ PF PT M+ + C + G +GE +ARRL E+ F
Sbjct: 545 ARAGLLEKAEELLNQTPFPPTSTMVAALVGACHEQGNIIIGERSARRLLEMKTENAGHFV 604
Query: 685 ITTNRF 690
+ N +
Sbjct: 605 LIANMY 610
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 214/486 (44%), Gaps = 71/486 (14%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+N ++ +G P L + +M + V + TY VLR+ AE L + + +H
Sbjct: 126 YNVLISNCLNHGLPHHALAAYHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVRA 185
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
V G G++ +++LV Y KC + AR +FD +++++ VSWN ++ Y +G ++AV
Sbjct: 186 VDAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAV 245
Query: 230 VMFFKM-------------------------------LREDIR---PLNF-TFANALFAC 254
+F +M +R+ +R ++F T AC
Sbjct: 246 ELFLRMQAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNAC 305
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S G +IHG+ +++ D V+ ++ MY +C +E A L +++W
Sbjct: 306 SRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMERALMLFKMIRCPGLVAWN 365
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+ ++G+A+ A LF EM ++ G +
Sbjct: 366 TTIAGFALLDDAEAASRLFREM----------VVCGDVQP-------------------- 395
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+ VT+ L +CA ++ ++ G+E+H I + + + N+L+DMY K G L A+ F
Sbjct: 396 NYVTVVTYLALCARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVF 455
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
M D +S+ +++ GY +G+ ++ F +M P T+L+AC++ +
Sbjct: 456 DTMDD-PDMISFTSMIAGYGMQGKGIISLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLV 514
Query: 494 EQGKQIHCFVIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+G+++ ++++ Y I +V++Y + LE A + ++ + ++
Sbjct: 515 GEGEELFDKMVKS-YGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAALV 573
Query: 552 GFCHNE 557
G CH +
Sbjct: 574 GACHEQ 579
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 38/345 (11%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K P Y + + CA + + R + V +F N + Y KC +L
Sbjct: 152 KDAVPPDAFTYPKVLRACAETGNLALGRAVHVRAVDAGMDGHLFFQNALVSMYAKCWDLA 211
Query: 95 DARGLFDEMPERDGGSWNAML-----------------------------------GAYT 119
AR +FD M RD SWN+M+ G Y
Sbjct: 212 AARTVFDGMEHRDVVSWNSMISGYAASGQWRKAVELFLRMQAEGAEMNSVTWNTIAGGYI 271
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV- 178
Q + L DM G S + +T + + L + K++HGL V R C +
Sbjct: 272 QMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAV-RMQCHEID 330
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR- 237
+ ++++ Y +C M A +F I+ V+WN + + + + + A +F +M+
Sbjct: 331 SVINAVITMYARCNDMERALMLFKMIRCPGLVAWNTTIAGFALLDDAEAASRLFREMVVC 390
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
D++P T L C+ +++ G ++H I+K F+G ++ SL +MY K GRL
Sbjct: 391 GDVQPNYVTVVTYLALCARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSV 450
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
A+ + D D+ ++IS+TS+++GY + G+ + F +M + ++
Sbjct: 451 AQNVFDTMDDPDMISFTSMIAGYGMQGKGIISLRFFKQMIDSGIM 495
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 128/299 (42%), Gaps = 12/299 (4%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
++N I Y +C +++ A LF + +WN + + LF +M G
Sbjct: 332 VINAVITMYARCNDMERALMLFKMIRCPGLVAWNTTIAGFALLDDAEAASRLFREMVVCG 391
Query: 139 -VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
V N +T L A L ++LH IVK+GF G +L +SL+D Y K ++ A
Sbjct: 392 DVQPNYVTVVTYLALCARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSVA 451
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+ +FD + + + +S+ ++ Y + G G ++ F +M+ I P L ACS
Sbjct: 452 QNVFDTMDDPDMISFTSMIAGYGMQGKGIISLRFFKQMIDSGIMPDAIIMVTVLSACSHS 511
Query: 258 SSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ---PDERNIISW 313
EG ++ ++K + + ++Y + G LE A LL+Q P +++
Sbjct: 512 GLVGEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVA- 570
Query: 314 TSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
++V G I R AR L EM N + + Y + W E LMR
Sbjct: 571 -ALVGACHEQGNIIIGERSARRLL-EMKTENAGHFVLIANMYAAAGCWNELATVRKLMR 627
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 283/544 (52%), Gaps = 48/544 (8%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
Y +L+ ++ + ++ +H I+K G ++ + +SLV+ Y KC M +AR++FD +
Sbjct: 77 YLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLH 136
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N V+W ++ Y+ A+ +F ML P N+T AL ACS ++S G Q
Sbjct: 137 RRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQ 196
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H +IK + D + +L +Y K G L+ +SI
Sbjct: 197 LHAFVIKYKLDYDPSIGNALCSLYSKLGSLD-----------------SSI--------- 230
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLIL 383
+F + E+NVISW A+++ + K A+ F +DI ++ TL +L
Sbjct: 231 -----NVFQSIGEKNVISWTAVISACGEN--GKAAMGLRFFNEMLLEDIKPNEFTLTTVL 283
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
++C + +G+ VH + Y N+ ++N+++ +Y KCG++ A+I F++M +
Sbjct: 284 SLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGST-NL 342
Query: 444 VSWNAVLTGYAR-----------RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
V+WNA+++G+A+ + EA++ F E+ + +P FT ++L C+ +S
Sbjct: 343 VTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLS 402
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L QG+Q+H I++ Y +VV ALV +Y+KC + A + F E S+ +I +MI
Sbjct: 403 ALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMIT 462
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G + +AL++F M+ G++P+ ITF G+L AC H G V AL +F+ M+ +Y I
Sbjct: 463 GLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIK 522
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P ++HY C+I ++ + + E D +N+M F P+ + + CR G LG +AA +
Sbjct: 523 PVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQ 582
Query: 672 LNEL 675
L +L
Sbjct: 583 LLKL 586
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 233/457 (50%), Gaps = 26/457 (5%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+K ++ + S Y L Q C ++ EA+ + ++++ + ++ + Y KCG +
Sbjct: 66 IKEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAM 125
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+AR +FD + R+ +W A++ Y QN P +++F DM SG + T L +
Sbjct: 126 GNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNAC 185
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+ + + KQLH ++K + + ++L Y K + + +F I KN +SW
Sbjct: 186 SAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWT 245
Query: 214 VIVRRYLVAGNGKEAVVMFF--KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
++ NGK A+ + F +ML EDI+P FT L C + G +H + I
Sbjct: 246 AVISA--CGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSI 303
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K+ ++ + + S+ +Y+KCG +++A+ L + N+++W +++SG+A +A +
Sbjct: 304 KLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHA------QAMD 357
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
L + ++A +G EAL + +T K D TL +L VC+ LS
Sbjct: 358 LAKD-------DFSAQRSGI-------EALSIFLELNRTGKKPDLFTLSSVLTVCSRLSA 403
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+++H ++ Y S++ V AL++MY KCG++ A F +MS R +SW ++T
Sbjct: 404 LGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMST-RTLISWTTMIT 462
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAAC 487
G A+ G SE+A+ F +M+ RP++ TF +LAAC
Sbjct: 463 GLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAAC 499
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 13/292 (4%)
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ L + EAL F+ K K I+ +L C + + + +H I + ++
Sbjct: 55 KPLEFHEALCFI----KEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLA 110
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QW 471
V +L+++Y KCG + +AR F + RR+ V+W A++TGY + Q A+ F +M +
Sbjct: 111 VMTSLVNVYAKCGAMGNARKIFDSL-HRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLES 169
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
T PS +T L AC+ I+S++ GKQ+H FVI+ + + AL +Y+K L+ +
Sbjct: 170 GTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSS 229
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
I VF+ +VI ++I N + L F M E IKP+ T +L C
Sbjct: 230 INVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCC-- 287
Query: 592 GNVKLAL---QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
V LAL + S+ K G L ++ LY + G+M E + ++M
Sbjct: 288 --VTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKM 337
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 265/522 (50%), Gaps = 34/522 (6%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ELG ++ H +VK G + + +SL+D Y KC + A R++D + + +A + N ++
Sbjct: 129 VELG--RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLI 186
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G +A +F ++ RP ++T++ L C +S+ EG Q+H ++K+ +
Sbjct: 187 SAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYL 246
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ V +L +Y KCG +E+A + + +RNIISWT+ ++G+ G ++A + F+
Sbjct: 247 SETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFS-- 304
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+MR++ + ++ T ++L C + + G+
Sbjct: 305 -----------------------------MMRESGIEPNEFTFSIVLASCGCVKDFIDGR 335
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
H + + +S +FV A++DMY G + A F QM + VSWNA++ GY
Sbjct: 336 MFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLN 395
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
+ E+AM +F M + + ++FT+ + AC++ SL QIH +I++ E N+
Sbjct: 396 EKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVA 455
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+E YT+C LE A++VF + S DV+ NS+I + N +A+ + M +EG K
Sbjct: 456 SSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNK 515
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P TF +L AC H G V+ +FF SM Y I P+ H CM+ + R G ++ D
Sbjct: 516 PTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALD 575
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
F+ ++ PT + R + CR N + E+ A ++ +L P
Sbjct: 576 FIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEP 617
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/564 (25%), Positives = 247/564 (43%), Gaps = 78/564 (13%)
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
H ++ TYA + A + L + LH +V G + L+ Y +C +
Sbjct: 795 THRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQL 854
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
++AR++FD I N +RR+ +V+ R + AL
Sbjct: 855 SNARKLFDKIP-------NTNIRRW---------IVLTGACARRGF------YEEAL--- 889
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG-------LLDQPDE 307
S + MQ G+ + VL S+ + CG L D R +L E
Sbjct: 890 ----SAFSEMQKEGL------RPNQFVLPSILK---ACGHLSDRRTGENMHTVILKNSFE 936
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+ ++++ Y+ G + +A +F+ + +++++ NAM++GY + EALB V M
Sbjct: 937 SDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKM 996
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
++ + V+ ++ + + + M EV + N ++
Sbjct: 997 QQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV---------------- 1040
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAA 486
VSW +V++G+ + + E +F EM + PS T +LL A
Sbjct: 1041 ----------------VSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPA 1084
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C N+++L GK+IH + + E +V R ALV++Y KC + A +F + +
Sbjct: 1085 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 1144
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NS+I G+ ++ EA+E+F M++ K DH+TF +L AC H G V+L F M+
Sbjct: 1145 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQE 1204
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
KY I P+LEHY CM+ L R G + E D + MP P + + CR +G L E
Sbjct: 1205 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAE 1264
Query: 667 WAARRLNELNPWAPFQFKITTNRF 690
AA L EL P +P + +N +
Sbjct: 1265 VAAEHLFELEPESPGSSLLLSNLY 1288
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 239/522 (45%), Gaps = 67/522 (12%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ I+ Y KCG +D A ++D+M D + N ++ AY +NGF + ++F+ + +
Sbjct: 149 FVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNM 208
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G N TY+ +L + KQLH +VK + + ++L+ Y KC +M +A
Sbjct: 209 GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F+ ++ +N +SW + + G+ K+A+ F M I P FTF+ L +C +
Sbjct: 269 EIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCV 328
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNIISWTSI 316
+G H +IK V ++ +MY G +++A Q + +SW ++
Sbjct: 329 KDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNAL 388
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GY ++ +I +A E F M + +V ++
Sbjct: 389 IAGYVLNEKIEKAMEAFCRMVKEDVA-------------------------------CNE 417
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T I C+ + ++H + +++ SN+ V+++L++ Y +CG+L +A F Q
Sbjct: 418 FTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQ 477
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
+S D VSWN+++ Y++ G +A+ +M E +P+ TF T+L+AC++ +++
Sbjct: 478 ISD-ADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQE 536
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G++ ++++ Y I T C C+ +D ILG
Sbjct: 537 GQEFFKSMVQD-YSIQ--------PEETHCSCM------------VD-------ILG--- 565
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
R + +KK +KP + +L AC + N+++A
Sbjct: 566 --RAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMA 605
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 195/419 (46%), Gaps = 40/419 (9%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y+ + +C + AI E ++L +++V + N + Y KCG +++A
Sbjct: 212 PNHYT-YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEI 270
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F+ + +R+ SW A + + Q+G + L+ F M SG+ N+ T++ VL S +
Sbjct: 271 VFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKD 330
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVR 217
+ H ++K+G V + ++++D Y M +A + F + + + VSWN ++
Sbjct: 331 FIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIA 390
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y++ ++A+ F +M++ED+ FT++N ACS S +QIH +IK + E
Sbjct: 391 GYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVES 450
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V SL E Y +CG LE+A + Q + +++SW SI+ Y+ +G
Sbjct: 451 NLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGD------------ 498
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
W A +FL+RK ++ ++ T L V + S + +E
Sbjct: 499 -----PWKA-----------------IFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQE 536
Query: 398 VHGFIHR--NDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
F DYS ++ ++D+ + G L +A + +++ + W +L
Sbjct: 537 GQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAA 595
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 203/489 (41%), Gaps = 45/489 (9%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S YA + A +A+ R L ++LV + + + Y +CG L +AR LF
Sbjct: 802 SSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLF 861
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D++P + W + GA + GF L F +M G+ NQ ++L++ +
Sbjct: 862 DKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRR 921
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +H +I+K F + + S+L+ Y KC + A R+FD I +K+ V N +V Y
Sbjct: 922 TGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYA 981
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC-------SFLSSPYEGMQIHGVIIKI 273
G EA+ + KM + ++P N N L A S +S + M +GV +
Sbjct: 982 QHGFVHEALBLVQKMQQAGVKP-NVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV 1040
Query: 274 ---------------DFEGDD--------------VVLGSLTEMYVKCGRLEDARGLLDQ 304
+ EG D V + SL L + +
Sbjct: 1041 VSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGY 1100
Query: 305 P----DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
E+++ +++V YA G I EA+ LF MPERN ++WN+++ GY EA
Sbjct: 1101 AMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEA 1160
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH-RNDYSSNIFVSNALLD 419
++ M ++ +D +T +LN C+ +++G+ + + + + ++D
Sbjct: 1161 IELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVD 1220
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPS 476
+ + G L A M DK W A+L G +E A E++ E+ S
Sbjct: 1221 LLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGS 1280
Query: 477 KFTFETLLA 485
L A
Sbjct: 1281 SLLLSNLYA 1289
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 7/261 (2%)
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C +++G+ H F+ + S+ FV +L+DMY KCG + SA + Y D
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA-VRVYDKMTSLD 178
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
+ N +++ YAR G +A F ++ TRP+ +T+ T+LA C IS++++GKQ+H
Sbjct: 179 AATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHA 238
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
V++ Y AL+ +Y+KC +E A VF+ ++I + I GF + ++
Sbjct: 239 HVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKK 298
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK--LALQFFDSMRCKYGIIPQLEHYEC 619
AL+ F +M++ GI+P+ TF +L +C G VK + + F + K G+ +
Sbjct: 299 ALKQFSMMRESGIEPNEFTFSIVLASC---GCVKDFIDGRMFHTQVIKKGMASGVFVGTA 355
Query: 620 MIKLYCRYGYMKELEDFVNRM 640
+I +Y G M E E +M
Sbjct: 356 IIDMYSGLGEMDEAEKQFKQM 376
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 119/570 (20%), Positives = 225/570 (39%), Gaps = 75/570 (13%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+K D + Y+++F+ C+S ++ ++ S L+ + + + IE Y +CG+L
Sbjct: 409 VKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSL 468
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
++A +F ++ + D SWN+++ AY+QNG P + + L M G T+ VL +
Sbjct: 469 ENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSAC 528
Query: 154 AEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ H +V+ G F +++ + S+ C M D ++N
Sbjct: 529 S-----------HSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLEN----- 572
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
+ F K L ++P + L AC + S+ + I+
Sbjct: 573 -----------------ALDFIKKL--TMKPTASIWRPLLAACRYNSNLQMAEYVAEKIL 613
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDA---RGLLDQPD--ERNIISWTSIVSGYAISGRI 326
++ D V +L+ MY + GR DA R L++Q + + SW + + +
Sbjct: 614 DLE-PNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMY---KF 669
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL--GLILN 384
+ EMP+ V L + + + V L ++ + +Q+ L L
Sbjct: 670 FSHDKAHPEMPK--VYEKLKQLVRQIQDIGYSPPTTTV-LHPESRQPKEQLILYHSEKLA 726
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--RD 442
VC GL + GK + +L R C + S + +++ R
Sbjct: 727 VCFGLLSLPPGKPIR-----------------VLKNLRVCLDCYSTMKYISRITDRYIPT 769
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
++ A + R + S + + S T+ + A +L +G+ +H
Sbjct: 770 PLAAAAAMQSLINRANVYRVYRNISTHR-TFQSSSDTYAKAIDMYARDRALYRGRALHAH 828
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG--R 560
++ L+ YT+C L A ++F + + + I ++L RG
Sbjct: 829 LVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTN--IRRWIVLTGACARRGFYE 886
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIH 590
EAL F M+KEG++P+ IL AC H
Sbjct: 887 EALSAFSEMQKEGLRPNQFVLPSILKACGH 916
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 273/529 (51%), Gaps = 37/529 (6%)
Query: 115 LGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
+ AYT+N LELF + + + + TY +VL++ + +H ++K G
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F ++++ SSLV + KC + A ++FD++ ++ WN ++ Y G ++A+ MF
Sbjct: 61 FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
KM P + T + +C+ L G +IH +++ D V +L +MY K G
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFG 180
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
L+ A+++F +MP++ +++WN+++AGY+
Sbjct: 181 CLD-------------------------------LAKDIFEQMPKKTLVAWNSLIAGYSS 209
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+ KE ++ + M TL IL C+ + ++ G+ +HG+ RN +IFV
Sbjct: 210 AADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFV 269
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
S+ L+++Y KCG ++SA FY M + + V WN +++GY G +A+ + EM+ +
Sbjct: 270 SSGLIELYFKCGKVQSAENIFY-MLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIAS 328
Query: 474 -RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+P TF ++L+AC+ +++LE+GK+IH + +N E N + GAL+++Y KC ++ A+
Sbjct: 329 VKPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEAL 388
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
VF + D++ S+I + + + EAL +F +++ PD +TF +L AC H G
Sbjct: 389 SVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAG 448
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
V +F+ M YGI P LEHY C+I L G ++E +N +P
Sbjct: 449 LVDKGYYYFNQMITNYGIKPGLEHYSCLIDL---LGRIQEQSQELNEIP 494
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 249/510 (48%), Gaps = 42/510 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P S++ Y + + C R + ++L+ + + + + + KC A
Sbjct: 27 QPDSFT-YPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAI 85
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFDEMPERD WN ++ Y Q+G + LE+F M SG N +T V+ S A L
Sbjct: 86 QLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLL 145
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+L K++H +++ G + + S+LVD YGK + A+ +F+ + K V+WN ++
Sbjct: 146 DLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIA 205
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y A + KE + +F++M E +P T ++ L ACS + G IHG ++ +
Sbjct: 206 GYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQL 265
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V L E+Y KCG+++ A + + N++ W ++SGY G +A ++++EM
Sbjct: 266 DIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMK 325
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+V D VT IL+ C+ L+ ++ GKE
Sbjct: 326 IASV-------------------------------KPDAVTFSSILSACSQLAALEKGKE 354
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H I +ND +N V ALLDMY KCG + A F ++ + RD +SW ++++ Y G
Sbjct: 355 IHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPE-RDLLSWTSIISAYGSHG 413
Query: 458 QSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
Q+ EA+ F E+Q + P TF +L+AC++ +++G +I N Y I
Sbjct: 414 QALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITN-YGIK----- 467
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
+E Y+ C ++ R+ ++S L+ I C
Sbjct: 468 PGLEHYS--CLIDLLGRIQEQSQELNEIPC 495
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 248/482 (51%), Gaps = 36/482 (7%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +F+ I N + N I+R Y ++A++ + M+ + + P FTF + +C
Sbjct: 93 ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV 152
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L EG Q+H K+ F D + +L MY CG L
Sbjct: 153 LC---EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCL--------------------- 188
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
AR++F++M ++V+SW M+ Y + L EA+ M + ++
Sbjct: 189 ----------VSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNE 238
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+TL +L CA +++ K+VH +I + +++AL+D+Y KCG AR F +
Sbjct: 239 ITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNK 298
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M ++ + WN ++ G+ EEA++ F+EMQ + K T +LL AC ++ +LE
Sbjct: 299 MPEK-NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALEL 357
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK +H ++ + E++V ALV++Y KC +E A+RVF+E DV+ ++I+G
Sbjct: 358 GKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAM 417
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+G +ALE+F M+ +KPD ITF G+L AC H G V + +F+SM KYGI P +E
Sbjct: 418 CGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIE 477
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ + R G + E ED + MP P +L + CR +G + E AA++L EL
Sbjct: 478 HYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIEL 537
Query: 676 NP 677
+P
Sbjct: 538 DP 539
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 197/407 (48%), Gaps = 36/407 (8%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G+L AR +F+++P + N+++ YT P + + + M G+ ++ T+ ++
Sbjct: 88 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 147
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+S E KQLH K GF + ++++L++ Y C + AR++FD + NK+ V
Sbjct: 148 KSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 204
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW ++ Y EA+ +F +M ++P T N L AC+ Q+H I
Sbjct: 205 SWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI 264
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+ V+ +L ++Y KCG AR L ++ E+N+ W +++G+ EA
Sbjct: 265 DETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEAL 324
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LFNEM L+G D+VT+ +L C L
Sbjct: 325 SLFNEM----------QLSGVKG---------------------DKVTMASLLIACTHLG 353
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+++GK +H +I + ++ + AL+DMY KCG++ SA F +M + +D ++W A++
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE-KDVMTWTALI 412
Query: 451 TGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQG 496
G A GQ +A+ F EMQ E +P TF +LAAC++ + +G
Sbjct: 413 VGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 459
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 166/323 (51%), Gaps = 7/323 (2%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ LF+ C + E ++L + ++ N + Y CG L AR +FD+M
Sbjct: 143 FPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMV 199
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ SW M+GAY Q P ++LF M + V N+IT NVL + A +L +KQ
Sbjct: 200 NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQ 259
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H I + G + +L S+L+D Y KC AR +F+ + KN WN+++ ++ +
Sbjct: 260 VHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSD 319
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA+ +F +M ++ T A+ L AC+ L + G +H I K E D + +
Sbjct: 320 YEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTA 379
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV--- 341
L +MY KCG +E A + + E+++++WT+++ G A+ G+ +A ELF+EM V
Sbjct: 380 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPD 439
Query: 342 -ISWNAMLAGYTRSLLWKEALDF 363
I++ +LA + + L E + +
Sbjct: 440 AITFVGVLAACSHAGLVNEGIAY 462
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 312 SWTSIVSGYAI--SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
S + IV+ A+ SG + AR +FN++P + N+++ GYT L ++A+ F LM
Sbjct: 74 SASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMML 133
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
D D+ T + C L E GK++H + ++S+ ++ N L++MY CG L S
Sbjct: 134 QGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVS 190
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACA 488
AR F +M + VSW ++ YA+ EA+ F M+ + +P++ T +L ACA
Sbjct: 191 ARKVFDKMVN-KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACA 249
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
LE KQ+H ++ + V AL++VY KC C A +F + ++ N
Sbjct: 250 RSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNI 309
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
MI G + EAL +F M+ G+K D +T +L+AC H G ++L
Sbjct: 310 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELG 358
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE--VYTKCCCLEYAIR 533
S+ L + +++ Q KQIH ++R C ++ +V L YA
Sbjct: 36 SQIQLHPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARL 95
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
VF + + CNS+I G+ + R+A+ + LM +G+ PD TF + +C
Sbjct: 96 VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC 150
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 188/629 (29%), Positives = 294/629 (46%), Gaps = 76/629 (12%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
+ S + EAR++ + P F N I Y L DA LF P ++ SWN
Sbjct: 39 SKSGRVDEARQMFDKM----PERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWN 94
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
A++ Y ++G LF +M G+ N+ T +VLR + L +Q+HG +K
Sbjct: 95 ALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT 154
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVM 231
GF +V + + L+ Y +C +++A +F+ ++ KN V+W ++ Y G +A+
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIEC 214
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F + RE + +TF + L AC+ +S+ G+Q+H I+K F+ + V +L +MY K
Sbjct: 215 FRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
C +E A R L M +V+SWN+M+ G
Sbjct: 275 CREMESA-------------------------------RALLEGMEVDDVVSWNSMIVGC 303
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS--EIKMGKEVHGFIHRNDYSS 409
R L EAL M + ID T+ ILN C LS E+K+ H I + Y++
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYAT 362
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
V+NAL+DMY K G + SA F M + +D +SW A++TG G +EA+ F M
Sbjct: 363 YKLVNNALVDMYAKRGIMDSALKVFEGMIE-KDVISWTALVTGNTHNGSYDEALKLFCNM 421
Query: 470 Q-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ P K ++L+A A ++ LE G+Q+H I++ + ++ +LV +YTKC L
Sbjct: 422 RVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSL 481
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
E A +F D+I +I+G+ N GL++
Sbjct: 482 EDANVIFNSMEIRDLITWTCLIVGYAKN----------GLLED----------------- 514
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
A ++FDSMR YGI P EHY CMI L+ R G ++E +++M P +
Sbjct: 515 --------AQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATV 566
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ I RK+G GE AA+ L EL P
Sbjct: 567 WKAILAASRKHGNIENGERAAKTLMELEP 595
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 227/444 (51%), Gaps = 43/444 (9%)
Query: 34 LKSD--EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
++SD +P Y+L + ++C S ++ ++ + + V ++N + Y +C
Sbjct: 116 MQSDGIKPNEYTL-GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK 174
Query: 92 NLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
+ +A LF+ M E++ +W +ML Y+QNGF + +E F D+ G +NQ T+ +VL
Sbjct: 175 RISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVL 234
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ A V Q+H IVK GF N+ ++S+L+D Y KC M AR + + ++ + V
Sbjct: 235 TACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI---- 266
SWN ++ + G EA+ MF +M D++ +FT ++ C LS M+I
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP-SILNCFALSRTE--MKIASSA 351
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H +I+K + +V +L +MY K G ++ A + + E+++ISWT++V+G +G
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA +LF N + G T D++ +L+
Sbjct: 412 DEALKLF----------CNMRVGGITP---------------------DKIVTASVLSAS 440
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A L+ ++ G++VHG ++ + S++ V+N+L+ MY KCG+L A + F M + RD ++W
Sbjct: 441 AELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM-EIRDLITW 499
Query: 447 NAVLTGYARRGQSEEAMTSFSEMQ 470
++ GYA+ G E+A F M+
Sbjct: 500 TCLIVGYAKNGLLEDAQRYFDSMR 523
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 178/308 (57%), Gaps = 5/308 (1%)
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+++LG L+ K GR+++AR + D+ ER+ +W +++ Y+ S R+ +A +LF P
Sbjct: 32 NLLLGDLS----KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPV 87
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+N ISWNA+++GY +S EA + + M+ ++ TLG +L +C L + G+++
Sbjct: 88 KNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQI 147
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG + + ++ V N LL MY +C + A F M ++ V+W ++LTGY++ G
Sbjct: 148 HGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGF 207
Query: 459 SEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+ +A+ F +++ E S ++TF ++L ACA++S+ G Q+HC ++++ ++ N+ + A
Sbjct: 208 AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y KC +E A + + DV+ NSMI+G EAL +FG M + +K D
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Query: 578 HITFHGIL 585
T IL
Sbjct: 328 DFTIPSIL 335
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K G +D A +F+ M E+D SW A++ T NG L+LF +M G++
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++I A+VL +SAE L +Q+HG +K GF ++ + +SLV Y KC + DA +
Sbjct: 428 PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVI 487
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGK-EAVVMFFKMLREDIRPLNFTFANALFAC--SFL 257
F+ ++ ++ ++W ++ Y A NG E +F +R T +AC
Sbjct: 488 FNSMEIRDLITWTCLIVGY--AKNGLLEDAQRYFDSMRT---VYGITPGPEHYACMIDLF 542
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED---ARGLLDQPDERNIISWT 314
+ +++ ++ +++ E D V ++ K G +E+ A L + + N + +
Sbjct: 543 GRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV 602
Query: 315 SIVSGYAISGRIREARELFNEMPERNV 341
+ + Y+ +GR EA + M RN+
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNI 629
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/660 (25%), Positives = 310/660 (46%), Gaps = 46/660 (6%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG---NLDDARGLF 100
+ A L S A+ + +++ +PT +FL N + Y + G L AR L
Sbjct: 1 MEAFYLDLLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAAR-LI 59
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELEL 159
DEMP R+ S+N ++ +Y++ G PGR LE F + G+ ++ TYA L + + L+L
Sbjct: 60 DEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDL 119
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K +H + V G V L +SL Y C M +ARR+FD + + VSWN ++ Y
Sbjct: 120 RTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGY 179
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS--SPYEGMQIHGVIIKIDFEG 277
+ AG +E + +F M + +F + + C+ S + +HG ++K +
Sbjct: 180 VRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDA 239
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D + ++ +MY K G L +A L F +P
Sbjct: 240 DLFLASAMIDMYAKRGALTNAVAL-------------------------------FKSVP 268
Query: 338 ERNVISWNAMLAGYTRSL------LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ NVI +NAM+AG+ R + +EAL M+ + T IL C E
Sbjct: 269 DPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGE 328
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
GK++HG + ++ + + ++ +AL+D+Y G + F + ++D V+W ++++
Sbjct: 329 FGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSL-PKQDIVTWTSMIS 387
Query: 452 GYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G + E+A+ F E + + +P FT +++ ACA+++ G+QI C I+ +
Sbjct: 388 GCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNR 447
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ + + + ++ R F+E S DV+ +++I + R+AL +F M
Sbjct: 448 FTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMM 507
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+ P+ +TF +L AC H G V L++++ M+ +YG+ P ++H C++ L R G +
Sbjct: 508 NAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRL 567
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ E F+ F+ + R + CR +G G+ A ++ +L P + + I N +
Sbjct: 568 ADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMY 627
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 184/622 (29%), Positives = 300/622 (48%), Gaps = 54/622 (8%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE--RDGGSWNAMLGAYTQN 121
+ ++L+TFY + P LL A +F ++P RD SWN++L +++
Sbjct: 51 VSNSLITFYCSLPRPLLGAAYV-------------VFADIPAALRDVASWNSLLNPLSRH 97
Query: 122 GFPGRTLELFLDMNHS--GVSANQITYANVLRSSAEELELGVSKQLHGLIVK-RGFCG-- 176
P L F M S V + ++A ++A H L K CG
Sbjct: 98 -HPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSN 156
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
NV + ++L++ Y K ++DA+R+FD + ++NAVSW +V Y +EA +F ML
Sbjct: 157 NVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLML 216
Query: 237 RE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++ + F L A S G Q+HG+++K G V SL MY K +
Sbjct: 217 QKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECM 276
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ A +F ERN I+W+AM+ GY ++
Sbjct: 277 D-------------------------------AAMRVFGSSKERNSITWSAMITGYAQNG 305
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
A M + + T +LN C+ + + +GK+ H + + + + ++V +
Sbjct: 306 EANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKS 365
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KCG + A+ F+Q+ D V W A++TG+ + G+ EEA+ +S M +
Sbjct: 366 ALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGII 425
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
PS T ++L ACA +++L+ GKQ+H +++ + + AL +Y+KC LE ++ V
Sbjct: 426 PSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVV 485
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F+ DVI NS+I F + RG +AL++F MK EG PDHITF +L AC H G V
Sbjct: 486 FRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLV 545
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+F +M Y +IP L+HY CM+ + R G +KE +DF++ + + + R +
Sbjct: 546 DRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLG 605
Query: 655 KCRKNGYATLGEWAARRLNELN 676
CR +G +A +L EL
Sbjct: 606 ACRSLRDFDVGAYAGEQLMELG 627
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 221/447 (49%), Gaps = 37/447 (8%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
AS+ A+ A L L + + VF+ + Y K G + DA+ +FD M R+ SW
Sbjct: 136 ASAGAVTHA--LACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWA 193
Query: 113 AMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
AM+ Y ELF L + + N+ VL + + L L + QLHGL++K
Sbjct: 194 AMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLK 253
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G G V +E+SLV Y K M A R+F + +N+++W+ ++ Y G A M
Sbjct: 254 DGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARM 313
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M P FTF L ACS + + G Q H +++K+ FE V +L +MY K
Sbjct: 314 FLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAK 373
Query: 292 CGRLEDAR-GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
CG + DA+ G D +++ WT++++G+ +G EA L++ M ++ +I
Sbjct: 374 CGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIP------- 426
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+T+ +L CA L+ + +GK++H I + +S
Sbjct: 427 ------------------------SYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLG 462
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
V AL MY KCGNL + + F +M RD +SWN++++ +++ G+ +A+ F EM+
Sbjct: 463 GSVGTALSTMYSKCGNLEDSMVVFRRMPD-RDVISWNSIISVFSQHGRGSDALDMFEEMK 521
Query: 471 WE-TRPSKFTFETLLAACANISSLEQG 496
E T P TF LL+AC+++ +++G
Sbjct: 522 LEGTAPDHITFINLLSACSHMGLVDRG 548
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 2/226 (0%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H P ++ + + C+ A+V ++ +V V++ + ++ Y KCG
Sbjct: 318 HSSGFTPTEFT-FVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGC 376
Query: 93 LDDARGLFDEMPERDGGS-WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+ DA+ F ++ + D W AM+ + QNG L L+ M+ G+ + +T +VLR
Sbjct: 377 IGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLR 436
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ A L + KQLH I+K F + ++L Y KC + D+ +F + +++ +S
Sbjct: 437 ACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVIS 496
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
WN I+ + G G +A+ MF +M E P + TF N L ACS +
Sbjct: 497 WNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHM 542
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 386 CAGLSE--IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN--LRSARIWFYQM-SQR 440
CA S+ + G+ +HG+ ++ +S+ VSN+L+ Y L +A + F + +
Sbjct: 22 CAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAAL 81
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR---PSKFTFETLLAACANISSLEQGK 497
RD SWN++L +R A++ F M PS +F A A + S G
Sbjct: 82 RDVASWNSLLNPLSRH-HPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGA 140
Query: 498 QIH---CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
H C + +C NV AL+ +Y K + A RVF + + +M+ G+
Sbjct: 141 VTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYA 200
Query: 555 HNERGREALEVFGLMKKE 572
+ EA E+F LM ++
Sbjct: 201 TGKCSEEAFELFRLMLQK 218
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 265/555 (47%), Gaps = 40/555 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
AN L+ SA+ L KQLH ++K GFC + L++ ++ Y KC DA ++F+++
Sbjct: 54 ANALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSV 113
Query: 207 KNAVSWNVIVRRYLVAG-------NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+N VSWN+++R + G N ++ F +ML E + P + TF C
Sbjct: 114 RNVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHD 173
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G Q+H +K+ + D V L ++Y +CG +E+A
Sbjct: 174 IDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENA--------------------- 212
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
R +F + R+++ WN M++ Y + L +EA LMR + D+ T
Sbjct: 213 ----------RRVFLVVQHRDLVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTF 262
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+L++C L GK+VHG I R + S++ V++AL++MY K N+ A F M
Sbjct: 263 SNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVI 322
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R + V+WN ++ GY R + E M EM E P + T + ++ C +S++ + Q
Sbjct: 323 R-NVVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQ 381
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H F +++ ++ + +L+ Y+KC + A + F+ + D++ S+I + +
Sbjct: 382 AHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGL 441
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
+EA EVF M GI PD I+F G+L AC H G V L +F+ M Y I+P HY
Sbjct: 442 AKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYT 501
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
C++ L RYG + E +F+ MP L C + L +WAA +L + P
Sbjct: 502 CLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEKLFTIEPE 561
Query: 679 APFQFKITTNRFDRY 693
+ + +N + +
Sbjct: 562 KNVNYAVMSNIYASH 576
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 228/486 (46%), Gaps = 50/486 (10%)
Query: 20 PTPSKTLTKTISGHLKSDEPVSYSLY-AHLFQLCASSKAIVEARKLESNLVTFYPTPPVF 78
P P +T H + +P + L+ A+ ++ A + E ++L ++L+ F +
Sbjct: 36 PVPDET-------HFR--DPHTVHLFCANALKVSAKRALLPEGKQLHAHLIKFGFCHVLS 86
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAML-------GAYTQNGFPGRTLELF 131
L N+ + Y KC DDA LF+E+ R+ SWN ++ A + + F
Sbjct: 87 LQNQILGVYLKCTEADDAEKLFEELSVRNVVSWNILIRGIVGCGDANENDSNQQQCFSYF 146
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M V + T+ + + ++ + QLH VK G + + S LVD Y +C
Sbjct: 147 KRMLLELVVPDSTTFNGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQC 206
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
++ +ARR+F +Q+++ V WNV++ Y + +EA VMF M + FTF+N L
Sbjct: 207 GLVENARRVFLVVQHRDLVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLL 266
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
C L G Q+HG I+++ F+ D +V +L MY K + DA L D RN++
Sbjct: 267 SICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVV 326
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+W +I+ GY G RE E+ + E M +
Sbjct: 327 AWNTIIVGY---GNRREGNEVMKLLRE----------------------------MLREG 355
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
D++T+ +++C +S I + H F ++ + + V+N+L+ Y KCG++ SA
Sbjct: 356 FSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSAC 415
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANI 490
F ++++ D VSW +++ YA G ++EA F +M P + +F +L+AC++
Sbjct: 416 KCF-RLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHC 474
Query: 491 SSLEQG 496
+ +G
Sbjct: 475 GLVTKG 480
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 164/333 (49%), Gaps = 12/333 (3%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF +C I +L V F+ + ++ Y +CG +++AR +F + RD
Sbjct: 164 LFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRD 223
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQL 165
WN M+ Y N P +F M G + ++ T++N+L S E + G KQ+
Sbjct: 224 LVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFG--KQV 281
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG I++ F +V++ S+L++ Y K + DA R+FD++ +N V+WN I+ Y G
Sbjct: 282 HGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREG 341
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
E + + +MLRE P T ++ + C ++S+ E MQ H +K F+ V SL
Sbjct: 342 NEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSL 401
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PER 339
Y KCG + A E +++SWTS+++ YA G +EA E+F +M P++
Sbjct: 402 ISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQ 461
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
IS+ +L+ + L + L + LM K
Sbjct: 462 --ISFLGVLSACSHCGLVTKGLHYFNLMTSVYK 492
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 163/386 (42%), Gaps = 26/386 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+++L +C S + +++ +++ V + + I Y K N+ DA LFD M
Sbjct: 262 FSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMV 321
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ +WN ++ Y ++L +M G S +++T ++ + + + Q
Sbjct: 322 IRNVVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQ 381
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H VK F + + +SL+ AY KC +T A + F + + VSW ++ Y G
Sbjct: 382 AHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGL 441
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
KEA +F KML I P +F L ACS +G+ ++ + D
Sbjct: 442 AKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYT 501
Query: 284 SLTEMYVKCGRLEDA----RGLLDQPDERNIISWTSIVSGYAISGRIREARE-LFNEMPE 338
L ++ + G + +A R + + + + ++ + + +A G + A E LF PE
Sbjct: 502 CLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEKLFTIEPE 561
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC----AGLSEIKM 394
+NV ++ M Y W D+++V ++ N C G S I++
Sbjct: 562 KNV-NYAVMSNIYASHRHW--------------SDVERVR-RMMGNKCDARVPGCSWIEI 605
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDM 420
+VH F+ + +A L M
Sbjct: 606 TNQVHSFVSNDKIHPKALEMHATLKM 631
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/650 (26%), Positives = 304/650 (46%), Gaps = 88/650 (13%)
Query: 84 IECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLG---AYTQNGFPGRTLELFLDMNHSGV 139
I+ G+ G L +A + + +P E + W +LG Y + R +++ D+
Sbjct: 756 IDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERES- 814
Query: 140 SANQITYANVLR-----SSAE---------------ELELGVSKQLHGLIVKRGFCGNVI 179
+ +NVL S AE E + K+LH +V G
Sbjct: 815 GGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLHNCQY 874
Query: 180 LESSLVDAYGKCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
S ++ Y + A ++F I++ WN ++R + K+A+V + K +
Sbjct: 875 AMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEK 934
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
++P N TF L AC+ +P EG Q+H +IK+ F D V SL +Y CG L A
Sbjct: 935 GMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACA 994
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
R +FNEM ++V+SWN+++ GY++ K
Sbjct: 995 RS-------------------------------VFNEMLVKDVVSWNSLIGGYSQHNRLK 1023
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
E L LM+ D+VT+ +++ C L + M + +I N ++++ N L+
Sbjct: 1024 EVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLI 1083
Query: 419 DMYRKCGNLRSARIWFYQMSQR------------------------------RDKVSWNA 448
D Y + G L+SA F QM + +D +SW++
Sbjct: 1084 DYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSS 1143
Query: 449 VLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ Y++ +++ F +MQ + +P ++L+ACA++ +L+ GK IH +V RN
Sbjct: 1144 MICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNN 1203
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ + + +L++++ KC C++ A++VF + D + NS+ILG +N EAL++F
Sbjct: 1204 IKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFH 1263
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
M EG +P+ +TF G+L+AC + V+ L F+ M+ + + PQ++HY C++ + R
Sbjct: 1264 SMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRA 1323
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
G +++ F++ MP P + R + CR +G + E A ++L+EL+P
Sbjct: 1324 GQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDP 1373
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 158/630 (25%), Positives = 288/630 (45%), Gaps = 54/630 (8%)
Query: 42 YSLYAH--LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
+ Y H L + S+ +VEARK+ + P V N I + G ++ AR L
Sbjct: 512 FHAYVHTALINVYVMSRCLVEARKVFDEM----PVKNVVSWNVMITGFAGWGEVEYARLL 567
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FD+MP R+ SW ++ YT+ L L M G+S ++IT V+ + + +
Sbjct: 568 FDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGI 627
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD-IQNKNAVSWNVIVRR 218
+ + L+G K+G + + +SL+D Y K + ++ ++FD+ + +N VSW I+
Sbjct: 628 LMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISG 687
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEG 277
+ + G EA+ +F +M R I+P TF + + ACS +G+ ++ + + +
Sbjct: 688 FAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDP 747
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ G + +M + GRL +A +++ P E N+ W ++ + G + M
Sbjct: 748 EIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEV--------AM 799
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK-----DIDQVTLGLILNVCAGLSE 391
ER + M++ R + DF L T+ D +Q L L E
Sbjct: 800 GERAI----KMISDLER----ESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQE 851
Query: 392 IKMG--KEVHGFIHRNDYSSNIFVSNALLDMYR-KCGNLRSARIWFYQMSQRRDKVSWNA 448
M K++H + + + + + ++ +Y +L SA F Q+ + WN
Sbjct: 852 AVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQI-ESPTTFLWNT 910
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+L G A+ ++A+ + + Q + +P TF +L ACA + ++G+Q+H VI+
Sbjct: 911 LLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLG 970
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +++ +L+ +Y C L A VF E DV+ NS+I G+ + R +E L +F
Sbjct: 971 FLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFK 1030
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE--------- 618
LM+ E ++ D +T ++ AC H G+ +A D M + +EH
Sbjct: 1031 LMQAEEVQADKVTMVKVISACTHLGDWSMA----DCM------VRYIEHNHIEVDVYLGN 1080
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+I YCR G ++ E ++M TV +
Sbjct: 1081 TLIDYYCRIGQLQSAEKVFSQMKDKNTVTL 1110
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 173/317 (54%), Gaps = 9/317 (2%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++FD ++ W ++ Y EA+ FK R+ + F F L AC+
Sbjct: 437 ALKVFD----QSPAPWRAFLKAYSHGPFPLEAL-HLFKHARQHLADDTFVFTFVLKACAG 491
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G Q+H ++++ FE V +L +YV L +AR + D+ +N++SW +
Sbjct: 492 LGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVM 551
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++G+A G + AR LF++MP RNV+SW ++ GYTR+ L+ EAL + M +
Sbjct: 552 ITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSE 611
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T+ ++ + L I MG+ ++G+ + S+ V N+L+D+Y K G+++++ F +
Sbjct: 612 ITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDE 671
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M RR+ VSW ++++G+A G S EA+ F+EM+ +P++ TF +++ AC++ +EQ
Sbjct: 672 MLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQ 731
Query: 496 GKQIHCFVIRNCYEINV 512
G F YE N+
Sbjct: 732 GL---AFFKSMVYEYNI 745
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 185/395 (46%), Gaps = 39/395 (9%)
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
R A ++F++ P W A L Y+ EAL R+ D D +L C
Sbjct: 435 RTALKVFDQSPA----PWRAFLKAYSHGPFPLEALHLFKHARQHLAD-DTFVFTFVLKAC 489
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
AGL + G ++H + + + + +V AL+++Y L AR F +M + + VSW
Sbjct: 490 AGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVK-NVVSW 548
Query: 447 NAVLTGYARRGQSEEAMTSFSEM------QWE------TR-------------------- 474
N ++TG+A G+ E A F +M W TR
Sbjct: 549 NVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGIS 608
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
PS+ T ++ A +N+ + G+ ++ + + + +L+++Y K ++ +++V
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 668
Query: 535 FKES-SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
F E +++ S+I GF + EALE+F M++ GIKP+ ITF ++ AC H G
Sbjct: 669 FDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGL 728
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V+ L FF SM +Y I P+++H+ C+I + R G + E E + +P V + R +
Sbjct: 729 VEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILL 788
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
C K G +GE A + +++L + F + +N
Sbjct: 789 GCCSKYGEVAMGERAIKMISDLERESGGDFAVLSN 823
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 211/457 (46%), Gaps = 41/457 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + + CA + A E ++ ++++ +F+ N I Y CG L AR +F+EM
Sbjct: 943 FPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEML 1002
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SWN+++G Y+Q+ L LF M V A+++T V+ + + ++
Sbjct: 1003 VKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADC 1062
Query: 165 L-----HGLIVKRGFCGNVILE--------------------------SSLVDAYGKCMV 193
+ H I + GN +++ ++++ AY K
Sbjct: 1063 MVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGN 1122
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ A+++FD I NK+ +SW+ ++ Y A + +++ +F +M R ++P A+ L A
Sbjct: 1123 LVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSA 1182
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L + G IH + + + + D ++ SL +M+ KCG +++A + +E++ +SW
Sbjct: 1183 CAHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSW 1242
Query: 314 TSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
SI+ G A +G EA ++F+ M P N +++ +L L +E LD M+
Sbjct: 1243 NSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKS 1302
Query: 370 TTKDIDQVT-LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
Q+ G ++++ LS ++ FI + + V LL R GN+
Sbjct: 1303 VHNLEPQMKHYGCVVDI---LSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVA 1359
Query: 429 SARIWFYQMSQRRDKVSWNAVLTG--YARRGQSEEAM 463
A + ++S+ S +++L YA + +AM
Sbjct: 1360 VAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAM 1396
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 146/658 (22%), Positives = 260/658 (39%), Gaps = 111/658 (16%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L+A + +LC + L +++ T PV R+ + A +FD+
Sbjct: 394 LWAPVSRLCPRRSS----SGLRHQALSYSSTAPVPATARSSTPPSRT-----ALKVFDQS 444
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P W A L AY+ FP L LF ++ + + VL++ A
Sbjct: 445 P----APWRAFLKAYSHGPFPLEALHLFKHARQH-LADDTFVFTFVLKACAGLGWHRAGA 499
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR------ 217
QLH L+V++GF + + ++L++ Y + +AR++FD++ KN VSWNV++
Sbjct: 500 QLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWG 559
Query: 218 --------------RYLVAGNG-----------KEAVVMFFKMLREDIRPLNFTFANALF 252
R +V+ G EA+ + M+ I P T +
Sbjct: 560 EVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIP 619
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP-DERNII 311
A S L G ++G K D V SL ++Y K G ++++ + D+ D RN++
Sbjct: 620 AISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLV 679
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SWTSI+SG+A+ G EA ELF E MR+
Sbjct: 680 SWTSIISGFAMHGLSVEALELFAE-------------------------------MRRAG 708
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKE-VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+++T ++N C+ ++ G ++ + I ++DM + G L A
Sbjct: 709 IKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEA 768
Query: 431 RIWFYQMSQRRDKVSWNAVL---TGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
+ + W +L + Y E A+ S+++ E+ +L
Sbjct: 769 EQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTEL 828
Query: 488 ANISSLEQG--------------------KQIHCFVI----RNC-YEINVVCRGALVEVY 522
S EQ K++H ++ NC Y ++ V R L ++
Sbjct: 829 GRFSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIR--LYALH 886
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
L A +VFK+ S + N+++ G ++ ++A+ + +++G+KPD++TF
Sbjct: 887 QS--DLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFP 944
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L AC K Q + + K G + + +I LY G + N M
Sbjct: 945 FVLKACAKTCAPKEGEQMHNHV-IKLGFLLDIFVSNSLIYLYAACGALACARSVFNEM 1001
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 20/334 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + QL ++ K + + + N VT LN I Y K GNL A+ +FD++P
Sbjct: 1086 YCRIGQLQSAEKVFSQMK--DKNTVT---------LNAMITAYAKGGNLVSAKKIFDQIP 1134
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D SW++M+ AY+Q +LELF M + V + + A+VL + A L + K
Sbjct: 1135 NKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKW 1194
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H + + + I+E+SL+D + KC + +A ++F D++ K+ +SWN I+ G
Sbjct: 1195 IHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGF 1254
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
EA+ +F ML E RP TF L AC+ EG+ + + + E G
Sbjct: 1255 EDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYG 1314
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNV- 341
+ ++ + G+LE A + + P + + W ++ G + A ++ E +
Sbjct: 1315 CVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPG 1374
Query: 342 ISWNAMLAG--YTRSLLWKEALDFVFLMRKTTKD 373
S ++ML Y + W +A++ +R+ T D
Sbjct: 1375 NSADSMLLSNIYASADRWSDAMN----VRRWTAD 1404
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/604 (28%), Positives = 285/604 (47%), Gaps = 48/604 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y C + DA+ FD + +R+ SW ++ A+ +G TL M GV + +T+
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ- 205
L S + L ++H ++V + + ++L++ Y KC ++ A+R+F ++
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N +SW+++ + + GN EA+ F ML I+ L ACS + +G
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRM 181
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE--RNIISWTSIVSGYAIS 323
IH I FE + +V ++ MY +CG +E+AR + D DE R+++SW ++S Y +
Sbjct: 182 IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHN 241
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
R ++A +L+ M R D+VT +L
Sbjct: 242 DRGKDAIQLYQRMQLRP----------------------------------DKVTYVSLL 267
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
+ C+ ++ +G+ +H I ++ N+ V NAL+ MY KCG+ AR F +M Q R
Sbjct: 268 SACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQ-RSI 326
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM--------QWETRPSKFTFETLLAACANISSLEQ 495
+SW +++ Y RR EA F +M +P F T+L ACA++S+LEQ
Sbjct: 327 ISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQ 386
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFC 554
GK + + A+V +Y KC +E A R+F S DV + N+MI +
Sbjct: 387 GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYA 446
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY-GIIPQ 613
+ EAL++F M+ EG++PD +F ILLAC H G +F SM +Y +
Sbjct: 447 QFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRT 506
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++H+ C+ L R G +KE E+F+ ++P P + CR + + A +L
Sbjct: 507 IQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLL 566
Query: 674 ELNP 677
L P
Sbjct: 567 RLEP 570
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 148/540 (27%), Positives = 251/540 (46%), Gaps = 68/540 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + Y KCG+L A+ +F +M R+ SW+ M GA+ +G L F M G+
Sbjct: 97 NALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGI 156
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
A + +L + + + + +H I GF +++ ++++ YG+C + +AR+
Sbjct: 157 KATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARK 216
Query: 200 MFDDIQN--KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+FD + ++ VSWN+++ Y+ GK+A+ ++ +M +RP T+ + L ACS
Sbjct: 217 VFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSA 273
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +H I+ + E + +V +L MY KCG +AR + D+ ++R+IISWT+I+
Sbjct: 274 EDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTII 333
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
S Y + EA LF +M E + + + +AL FV
Sbjct: 334 SAYVRRRLVAEACHLFQQMLE--------LEKNGSSQRVKPDALAFV------------- 372
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
ILN CA +S ++ GK V SS+ V A++++Y KCG + AR F +
Sbjct: 373 ---TILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAV 429
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
R D WNA++ YA+ GQS EA+ F M+ E RP F+F ++L AC++ +QG
Sbjct: 430 CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQG 489
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K Y EY + ++ C + +LG
Sbjct: 490 KS-----------------------YFTSMTTEYR----NVTRTIQHFGCVADLLG---- 518
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM-----RCKYGII 611
RG E ++K +KPD + + +L AC + ++K A + + + RC G +
Sbjct: 519 -RGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 577
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 221/481 (45%), Gaps = 50/481 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE-- 105
+ C+S + + R + S + + + N + YG+CG +++AR +FD M E
Sbjct: 166 ILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEAL 225
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
RD SWN ML Y N ++L+ M + +++TY ++L + + ++G+ + L
Sbjct: 226 RDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVL 282
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI----VRRYLV 221
H IV NVI+ ++LV Y KC T+AR +FD ++ ++ +SW I VRR LV
Sbjct: 283 HKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLV 342
Query: 222 AGNGKEAVVMFFKMLR-------EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
A EA +F +ML + ++P F L AC+ +S+ +G +
Sbjct: 343 A----EACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCG 398
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWTSIVSGYAISGRIREARELF 333
D V ++ +Y KCG +E+AR + D R ++ W ++++ YA G+ EA +LF
Sbjct: 399 LSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLF 458
Query: 334 NEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLM----RKTTKDIDQVTLGLILNV 385
M V S+ ++L + + L + + M R T+ I G + ++
Sbjct: 459 WRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQH--FGCVADL 516
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+K +E F+ + + +LL R +L+ A+ ++ + + +
Sbjct: 517 LGRGGRLKEAEE---FLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCA 573
Query: 446 WNAVLTGYARRGQSEEAMTS-FSEMQ-WE--TRPSKFTFETLLAACANISSLEQGKQIHC 501
TGY A+++ ++E+Q W + KF E + +S++E GK +H
Sbjct: 574 -----TGYV-------ALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHD 621
Query: 502 F 502
F
Sbjct: 622 F 622
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 154/312 (49%), Gaps = 37/312 (11%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY C DA+ D ++RN+ SWT +V+ +AISG+
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQS--------------------- 39
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
KE L + MR+ D VT L C ++ G +H + +
Sbjct: 40 ----------KETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRL 89
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ VSNALL+MY+KCG+L A+ F +M + R+ +SW+ + +A G EA+ F
Sbjct: 90 EIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFR 149
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M + +K T+L+AC++ + ++ G+ IH + + +E ++ A++ +Y +C
Sbjct: 150 FMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCG 209
Query: 527 CLEYAIRVFK--ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+E A +VF + + DV+ N M+ + HN+RG++A++++ M+ ++PD +T+ +
Sbjct: 210 AVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSL 266
Query: 585 LLACIHEGNVKL 596
L AC +V L
Sbjct: 267 LSACSSAEDVGL 278
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 174/381 (45%), Gaps = 35/381 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C+S++ + R L +V V + N + Y KCG+ +AR +FD+M
Sbjct: 263 YVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME 322
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELF---LDMNHSG----VSANQITYANVLRSSAEEL 157
+R SW ++ AY + LF L++ +G V + + + +L + A+
Sbjct: 323 QRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS 382
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNVIV 216
L K + G + + +++V+ YGKC + +ARR+FD + ++ V WN ++
Sbjct: 383 ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMI 442
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG--VIIKID 274
Y G EA+ +F++M E +RP +F+F + L ACS + G++ G +
Sbjct: 443 AVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS-----HTGLEDQGKSYFTSMT 497
Query: 275 FEGDDVV-----LGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIRE 328
E +V G + ++ + GRL++A L++ P + + ++WTS+++ ++
Sbjct: 498 TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKR 557
Query: 329 ARELFNEM---PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
A+E+ N++ R + A+ Y W M + ++
Sbjct: 558 AKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKER--------- 608
Query: 386 CAGLSEIKMGKEVHGFIHRND 406
G+S I++GK +H F +D
Sbjct: 609 --GVSTIEIGKYMHDFATGDD 627
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 179/612 (29%), Positives = 290/612 (47%), Gaps = 41/612 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
PTP LL A G L AR +FDE+P D SWN++L A+ G L
Sbjct: 26 PTPWNQLLT-AYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLK 84
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
DM+ G++A+ + LRS+A + QL VK G NV S+L+D Y KC
Sbjct: 85 DMHARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCG 144
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++DARR+FD + +N VSWN ++ Y + +A+ +F +M R ++ P + TFA AL
Sbjct: 145 RLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFA-ALL 203
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
A S Y MQ +HG I K VVL + Y +CG D+R
Sbjct: 204 ATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSR------------ 251
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF-VFLMRKT 370
+F+ + R++ISWN+ML Y + EA+ F V +MR++
Sbjct: 252 -------------------RIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRES 292
Query: 371 TKDIDQVTLGLILNVCAGLS-EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN--- 426
D + +++VC+ + + G+ +H + + V NA++ MY +
Sbjct: 293 GVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCM 352
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLA 485
+ A F + +D VSWN++LTGY+ G S +A+ F M+ E +F L
Sbjct: 353 MEDAYKCFDSLV-FKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALR 411
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
+C++++ L G+Q+H VI++ + N +L+ +Y+KC + A + F+E+ +
Sbjct: 412 SCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVP 471
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
NSM+ G+ + + + ++F M + DH+TF +L A H G V + +SM
Sbjct: 472 WNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSME 531
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+Y I ++EHY C + LY R G + + ++ + MPF P + + CR +G L
Sbjct: 532 TRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELA 591
Query: 666 EWAARRLNELNP 677
A L P
Sbjct: 592 SDVASHLFVAEP 603
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 279/567 (49%), Gaps = 35/567 (6%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ +Y +N P +++ M + + +VL++ + +++HG +VK G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F G+V + ++L+ Y + + AR +FD I+NK+ VSW+ ++R Y +G EA+ +
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVK 291
M ++P + + L+ G +H +++ G V +L +MYVK
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
C L AR +F+ + + ++ISW AM+A Y
Sbjct: 275 CENLA-------------------------------YARRVFDGLSKASIISWTAMIAAY 303
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
E + M +++T+ ++ C +++GK +H F RN ++ ++
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
++ A +DMY KCG++RSAR F + +D + W+A+++ YA+ +EA F M
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSF-KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTG 422
Query: 472 -ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
RP++ T +LL CA SLE GK IH ++ + + +++ + + V++Y C ++
Sbjct: 423 CGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDT 482
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A R+F E++ D+ + N+MI GF + G ALE+F M+ G+ P+ ITF G L AC H
Sbjct: 483 AHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSH 542
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G ++ + F M ++G P++EHY CM+ L R G + E + + MP P + +
Sbjct: 543 SGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFG 602
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNP 677
C+ + LGEWAA++ L P
Sbjct: 603 SFLAACKLHKNIKLGEWAAKQFLSLEP 629
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 224/464 (48%), Gaps = 36/464 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N I Y + G+L AR LFD++ +D SW+ M+ +Y ++G L+L DM+
Sbjct: 159 VFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHV 218
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG--NVILESSLVDAYGKCMVM 194
V ++I ++ AE +L + K +H +++ G CG V L ++L+D Y KC +
Sbjct: 219 MRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENL 278
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
ARR+FD + + +SW ++ Y+ N E V +F KML E + P T + + C
Sbjct: 279 AYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKEC 338
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ G +H ++ F V+ + +MY KCG + AR + D ++++ W+
Sbjct: 339 GTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWS 398
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++S YA + I EA ++F M +
Sbjct: 399 AMISSYAQNNCIDEAFDIFVHMTGCGIRP------------------------------- 427
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
++ T+ +L +CA ++MGK +H +I + ++ + + +DMY CG++ +A F
Sbjct: 428 NERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF 487
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSL 493
+ + RD WNA+++G+A G E A+ F EM+ P+ TF L AC++ L
Sbjct: 488 AEATD-RDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLL 546
Query: 494 EQGKQI-HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
++GK++ H V + V G +V++ + L+ A + K
Sbjct: 547 QEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIK 590
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 191/395 (48%), Gaps = 35/395 (8%)
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+ NA + ++ Y+ +A ++ M D NF + L AC + S G +
Sbjct: 86 SSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQE 145
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG ++K F GD V +L MY + G L AR L D+ + ++++SW++++ Y SG
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ EA +L +M +MR +I ++ I +V
Sbjct: 206 LDEALDLLRDM----------------------------HVMRVKPSEIGMIS---ITHV 234
Query: 386 CAGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
A L+++K+GK +H ++ RN S + + AL+DMY KC NL AR F +S +
Sbjct: 235 LAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLS-KASI 293
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCF 502
+SW A++ Y E + F +M E P++ T +L+ C +LE GK +H F
Sbjct: 294 ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAF 353
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+RN + +++V A +++Y KC + A VF S D+++ ++MI + N EA
Sbjct: 354 TLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEA 413
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
++F M GI+P+ T +L+ C G++++
Sbjct: 414 FDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG 448
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 176/362 (48%), Gaps = 20/362 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L + C ++ A+ + L + + T + L I+ YGKCG++ AR +FD +D
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
W+AM+ +Y QN ++F+ M G+ N+ T ++L A+ L + K +H
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I K+G G++IL++S VD Y C + A R+F + +++ WN ++ + + G+G+
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA 513
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLT 286
A+ +F +M + P + TF AL ACS EG ++ H ++ + F G +
Sbjct: 514 ALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMV 573
Query: 287 EMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIR----EARELFNEMPERNV 341
++ + G L++A L+ P NI + S ++ + I+ A++ + P ++
Sbjct: 574 DLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKS- 632
Query: 342 ISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+N +++ Y + W + V +R+ KD G++ G+S I++ +H
Sbjct: 633 -GYNVLMSNIYASANRWGD----VAYIRRAMKD-----EGIVKE--PGVSSIEVNGLLHE 680
Query: 401 FI 402
FI
Sbjct: 681 FI 682
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 303/603 (50%), Gaps = 32/603 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G L AR +FD +P D ++NA++ AY+ G ++L+ M V+ N+ T+ VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ + ++L + +H G ++ + ++L+D Y +C AR +F + ++ V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+WN ++ Y G A+ M +RP T + L + + ++G IH
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ R L+Q +E+ +I T+++ YA ++ A
Sbjct: 228 CL---------------------------RACLEQNEEQVLIG-TALLDMYAKCKQLVYA 259
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAG 388
+F+ MP RN ++W+A++ G+ EA + F ++ + + ++ L VCA
Sbjct: 260 CRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCAS 319
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L+++ MG ++H I ++ +++ SN+LL MY K G + A ++F +++ + D +S+ A
Sbjct: 320 LADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGA 378
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+L+G + G++EEA F +MQ P T +L+ AC+++++L+ GK H VI
Sbjct: 379 LLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRG 438
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +L+++Y KC ++ + +VF + + DV+ N+MI G+ + G+EA +F
Sbjct: 439 LALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFL 498
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK +G PD +TF ++ AC H G V +FD+M KYGI+P++EHY CM+ L R
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 558
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G + E F+ MP V + + CR + LG+ +R + +L P F + +
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618
Query: 688 NRF 690
N F
Sbjct: 619 NIF 621
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 38/428 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-N 135
+F+ I+ Y +C AR +F +MP RD +WNAML Y +G + LDM +
Sbjct: 135 LFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN---VILESSLVDAYGKCM 192
H G+ N T ++L A+ L +H ++ N V++ ++L+D Y KC
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT-FANAL 251
+ A R+F + +N V+W+ ++ +++ EA +F ML E + L+ T A+AL
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
C+ L+ + G Q+H +I K D SL MY K G + +A D+ ++ I
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S+ +++SG +G+ EA +F +M N+
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNM------------------------------ 404
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D T+ ++ C+ L+ ++ GK HG + + + N+L+DMY KCG + +R
Sbjct: 405 -EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANI 490
F +M RD VSWN ++ GY G +EA T F M+ + P TF L+AAC++
Sbjct: 464 QVFDKMPA-RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 491 SSLEQGKQ 498
+ +GK
Sbjct: 523 GLVTEGKH 530
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 9/356 (2%)
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W + + G++ AR++F+ +P + ++NA++ Y+ + A+D M +
Sbjct: 37 WQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRV 96
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
++ T +L C+ L +++ G+ +H +++FVS AL+D+Y +C AR
Sbjct: 97 APNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN 156
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANI 490
F +M RD V+WNA+L GYA G A+ +MQ RP+ T +LL A
Sbjct: 157 VFAKMPM-RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQH 215
Query: 491 SSLEQGKQIHCFVIRNCYEIN---VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+L QG IH + +R C E N V+ AL+++Y KC L YA RVF + + +
Sbjct: 216 GALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275
Query: 548 SMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
++I GF +R EA +F M EG+ + L C ++ + Q ++
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH-ALIA 334
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
K GI L ++ +Y + G + E F + + T+ + C +NG A
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY-GALLSGCVQNGKA 389
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
+S + A ++CAS + +L + + + N + Y K G +++A
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF 364
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FDE+ +D S+ A+L QNG +F M + + T +++ + + L
Sbjct: 365 FDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAAL 424
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K HG ++ RG + +SL+D Y KC + +R++FD + ++ VSWN ++ Y
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ G GKEA +F M + P + TF + ACS EG
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEG 528
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 255/513 (49%), Gaps = 32/513 (6%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG +VK GF + ++L+ Y K + DA +FD++ ++ +SWN I+ G
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+AV +F +M E + T + + AC + G +HG ++ + + +
Sbjct: 66 YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY C W R ++F M ++NV+SW
Sbjct: 126 LLDMYSNCS------------------DW-------------RSTNKIFRNMEQKNVVSW 154
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
AM+ YTR+ + + M D + L+ AG +K GK VHG+ R
Sbjct: 155 TAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIR 214
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
N + V+NAL++MY KCG + AR F ++ ++D +SWN ++ GY+R + EA T
Sbjct: 215 NGIEEVLPVANALMEMYVKCGYMEEARFIFDHVT-KKDTISWNTLIGGYSRSNLANEAFT 273
Query: 465 SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F+EM + RP+ T +L A A++SSLE+G+++H + +R Y + ALV++Y K
Sbjct: 274 LFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVK 333
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C L A R+F ++ ++I MI G+ + RGR+A+ +F MK GI+PD +F I
Sbjct: 334 CGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAI 393
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G +FF++MR ++ I P+L+HY CM+ L C G +KE +F+ MP P
Sbjct: 394 LYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEP 453
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + CR + L E A + EL P
Sbjct: 454 DSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEP 486
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 235/518 (45%), Gaps = 67/518 (12%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K ++DA +FDEMP+RD SWN+++G NG + +ELF+ M G
Sbjct: 23 NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T +V+ + + + +HG V+ G L ++L+D Y C ++
Sbjct: 83 LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +++ KN VSW ++ Y AG+ + +F +M E IRP F +AL A + S
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G +HG I+ E V +L EMYVKCG +E+AR + D +++ ISW +++ GY
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ S EA LFNEM + +R + VT+
Sbjct: 263 SRSNLANEAFTLFNEM---------------------------LLQLRP-----NAVTMA 290
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
IL A LS ++ G+E+H + R Y + FV+NAL+DMY KCG L AR F M
Sbjct: 291 CILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLF-DMLTN 349
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
++ +SW ++ GY G+ +A+ F +M+ +P +F +L AC++ ++G +
Sbjct: 350 KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
+RN + I L C M+ CH
Sbjct: 410 FN-AMRNEHRI---------------------------EPKLKHYAC--MVDLLCHTGNL 439
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+EA E M I+PD + +L C NVKLA
Sbjct: 440 KEAYEFIETMP---IEPDSSIWVSLLRGCRIHRNVKLA 474
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 153/327 (46%), Gaps = 34/327 (10%)
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+G+ +HG ++K F V +L Y K R+EDA + D+ +R+IISW SI+ G A
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G +A ELF M W E +++D TL
Sbjct: 62 SNGLYDKAVELFVRM--------------------WLEG-----------QELDSTTLLS 90
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
++ C +G VHG+ R S + NALLDMY C + RS F M Q +
Sbjct: 91 VMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQ-K 149
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
+ VSW A++T Y R G ++ F EM E RP F + L A A SL+ GK +H
Sbjct: 150 NVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVH 209
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ IRN E + AL+E+Y KC +E A +F + D I N++I G+ +
Sbjct: 210 GYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLAN 269
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLA 587
EA +F M + ++P+ +T IL A
Sbjct: 270 EAFTLFNEMLLQ-LRPNAVTMACILPA 295
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 3/239 (1%)
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G VHG++ + + + V NAL+ Y K + A + F +M Q RD +SWN+++ G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ-RDIISWNSIIGGCA 61
Query: 455 RRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G ++A+ F M E + T +++ AC G +H + +R
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL+++Y+ C ++F+ +V+ +MI + + +F M EG
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
I+PD L A ++K + + GI L ++++Y + GYM+E
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHG-KSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEE 239
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
AS ++ R++ + V F+ N ++ Y KCG L AR LFD + ++ SW
Sbjct: 297 ASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWT 356
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
M+ Y +G + LF M SG+ + +++ +L
Sbjct: 357 IMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAIL 394
>gi|356532922|ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Glycine max]
Length = 611
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 274/536 (51%), Gaps = 34/536 (6%)
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV-MTDARRMFD 202
+ YA++L++ + + LH ++K GF + + +SL+ Y K + AR +FD
Sbjct: 54 VVYASLLQACRKAHSFPLGTHLHAHVLKSGFLADRFVANSLLSLYSKLSPHFSQARALFD 113
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+ K+ ++W I+ ++ K AV +F +ML + I P FT ++ L ACS L + +
Sbjct: 114 ALPFKDVIAWTSIISGHVQKAQPKTAVHLFLQMLGQAIEPNAFTLSSILKACSQLENLHL 173
Query: 263 GMQIHGVIIKIDFEG-DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +H V+ F ++VV +L +MY + ++DAR + D+ E + + WT+++S A
Sbjct: 174 GKTLHAVVFIRGFHSNNNVVACALIDMYGRSRVVDDARKVFDELPEPDYVCWTAVISTLA 233
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+ R REA +F M + + ++D T G
Sbjct: 234 RNDRFREAVRVFFAMHDGGL-----------------------------GLEVDGFTFGT 264
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+LN C L ++MG+EVHG + N+FV ++LLDMY KCG + AR+ F + + +
Sbjct: 265 LLNACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGEVGCARVVFDGLEE-K 323
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
++V+ A+L Y G+ + E W + ++F T++ AC+ ++++ QG ++HC
Sbjct: 324 NEVALTAMLGVYCHNGECGSVLGLVRE--WRSMVDVYSFGTIIRACSGLAAVRQGNEVHC 381
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+R +VV ALV++Y KC +++A R+F + ++I N+MI GF N RG+E
Sbjct: 382 QYVRRGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQE 441
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
+E+F M KEG++PD I+F +L AC H G V ++FD MR +YGI P + HY CMI
Sbjct: 442 GVELFEEMVKEGVRPDWISFVNVLFACSHNGLVDQGRRYFDLMRREYGIRPGVVHYTCMI 501
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ R ++E E + + C K E A+++ +L P
Sbjct: 502 DILGRAELIEEAESLLESADCRYDHSRWAVLLGACTKCSDYVTAERIAKKMIQLEP 557
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 156/606 (25%), Positives = 274/606 (45%), Gaps = 79/606 (13%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
IL P + ++ +PV +YA L Q C + + L ++++
Sbjct: 25 QILHHCKLGALPKALILLKAQAQAQALKPV---VYASLLQACRKAHSFPLGTHLHAHVLK 81
Query: 71 FYPTPPVFLLNRAIECYGKCG-NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
F+ N + Y K + AR LFD +P +D +W +++ + Q P +
Sbjct: 82 SGFLADRFVANSLLSLYSKLSPHFSQARALFDALPFKDVIAWTSIISGHVQKAQPKTAVH 141
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVILESSLVDAY 188
LFL M + N T +++L++ ++ L + K LH ++ RGF N ++ +L+D Y
Sbjct: 142 LFLQMLGQAIEPNAFTLSSILKACSQLENLHLGKTLHAVVFIRGFHSNNNVVACALIDMY 201
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI--RPLNFT 246
G+ V+ DAR++FD++ + V W ++ +EAV +FF M + FT
Sbjct: 202 GRSRVVDDARKVFDELPEPDYVCWTAVISTLARNDRFREAVRVFFAMHDGGLGLEVDGFT 261
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
F L AC L G ++HG ++ + +G+ V SL +MY KCG
Sbjct: 262 FGTLLNACGNLGWLRMGREVHGKVVTLGMKGNVFVESSLLDMYGKCGE------------ 309
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ AR +F+ + E+N ++ AML Y + E + L
Sbjct: 310 -------------------VGCARVVFDGLEEKNEVALTAMLGVYCHN---GECGSVLGL 347
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+R+ +D + G I+ C+GL+ ++ G EVH R ++ V +AL+D+Y KCG+
Sbjct: 348 VREWRSMVDVYSFGTIIRACSGLAAVRQGNEVHCQYVRRGGWRDVVVESALVDLYAKCGS 407
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLA 485
+ A F +M + R+ ++WNA++ G+A+ G+ +E + F EM E RP +F +L
Sbjct: 408 VDFAYRLFSRM-EARNLITWNAMIGGFAQNGRGQEGVELFEEMVKEGVRPDWISFVNVLF 466
Query: 486 ACANISSLEQGKQ----------IHCFVIRNCYEINVVCRGALVE--------------- 520
AC++ ++QG++ I V+ I+++ R L+E
Sbjct: 467 ACSHNGLVDQGRRYFDLMRREYGIRPGVVHYTCMIDILGRAELIEEAESLLESADCRYDH 526
Query: 521 --------VYTKCCCLEYAIRVFKESSSLDVIICNS-MILGFCHNERGR--EALEVFGLM 569
TKC A R+ K+ L+ S ++LG + G+ EALE+ LM
Sbjct: 527 SRWAVLLGACTKCSDYVTAERIAKKMIQLEPDFHLSYVLLGNIYRAVGKWNEALEIRKLM 586
Query: 570 KKEGIK 575
++ G+K
Sbjct: 587 EERGVK 592
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 253/492 (51%), Gaps = 48/492 (9%)
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPY 261
+ +N N SWNV +R +L + N +EAVV++ ++L+ D +P N+T+ AC+ LS
Sbjct: 37 NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 96
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +I G ++ + F+ D V ++ + V CG L+ AR + D+ R+++SW S+++GY
Sbjct: 97 MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYV 156
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
G EA + EM + D+VT+
Sbjct: 157 RRGWAYEALNFYREMKVEGI-------------------------------KPDEVTMIG 185
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
+++ CA L ++ +G+E H +I N + ++NAL+DMY KCGNL SAR F M+ +
Sbjct: 186 VVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 245
Query: 441 --------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLA 485
+D V WNA++ GY + +EA+ F+EMQ P + T + L+
Sbjct: 246 MVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 305
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
AC+ + +L+ G IH ++ ++ +NV AL+++Y KC + AI+VF+E + +
Sbjct: 306 ACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLT 365
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
++I G + A+ F M + PD +TF G+L AC H G V+ ++F M
Sbjct: 366 WTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMS 425
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
K+ + P+L+HY CM+ L R G ++E E+ + MP + +F CR +G +G
Sbjct: 426 SKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMG 485
Query: 666 EWAARRLNELNP 677
E AA +L +++P
Sbjct: 486 ERAASKLLQMDP 497
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 199/391 (50%), Gaps = 18/391 (4%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWN + + + P + L+ + G + TY + ++ A + + ++ G
Sbjct: 45 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 104
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++ GF ++ + ++++ C + AR+MFD ++ VSWN ++ Y+ G EA
Sbjct: 105 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEA 164
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ + +M E I+P T + +C+ L G + H I + + + +L +M
Sbjct: 165 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDM 224
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y+KCG LE AR L D + ++SWT++ LF+EMP+++V+ WNAM+
Sbjct: 225 YMKCGNLESARKLFDSMTNKTMVSWTTM---------------LFDEMPDKDVVPWNAMI 269
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY + KEAL M+ + D+VT+ L+ C+ L + +G +H +I +++ S
Sbjct: 270 GGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS 329
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
N+ + AL+DMY KCG + A I +Q R+ ++W A+++G A G + A+ FSE
Sbjct: 330 LNVALGTALIDMYAKCGKITKA-IQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSE 388
Query: 469 M-QWETRPSKFTFETLLAACANISSLEQGKQ 498
M P + TF LL+AC + +E+G++
Sbjct: 389 MIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 419
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 172/344 (50%), Gaps = 22/344 (6%)
Query: 17 SPKPTPSKTLTKTISGHLKSD--EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT 74
S P + L K + L+ D +P +Y+ Y LF+ CA I ++ +++
Sbjct: 56 SENPREAVVLYKRV---LQCDGTKPDNYT-YPLLFKACARLSLIRMGSEILGHVLHLGFD 111
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
+F+ N I CG+LD AR +FD+ RD SWN+M+ Y + G+ L + +M
Sbjct: 112 SDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREM 171
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ +++T V+ S A+ +L + ++ H I + G V L ++L+D Y KC +
Sbjct: 172 KVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNL 231
Query: 195 TDARRMFDDIQNKNAVSW----------------NVIVRRYLVAGNGKEAVVMFFKMLRE 238
AR++FD + NK VSW N ++ Y+ A GKEA+ +F +M
Sbjct: 232 ESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAM 291
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+I P T + L ACS L + G+ IH I K + + + +L +MY KCG++ A
Sbjct: 292 NINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKA 351
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+ + RN ++WT+I+SG A+ G A F+EM + +V+
Sbjct: 352 IQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVM 395
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 36/352 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFD----------------EMPERDGGSWNAMLGAYTQ 120
V L N ++ Y KCGNL+ AR LFD EMP++D WNAM+G Y
Sbjct: 215 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVH 274
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
L LF +M ++ +++T + L + ++ L V +H I K NV L
Sbjct: 275 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVAL 334
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
++L+D Y KC +T A ++F ++ +N+++W I+ + GN A+ F +M+ +
Sbjct: 335 GTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 394
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVI-IKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
P TF L AC EG + + K + + ++ + G LE+A
Sbjct: 395 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 454
Query: 300 GLL-DQPDERNIISWTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLAG-YTR 353
L+ P E + + W ++ I G + R A +L P + I +LA Y
Sbjct: 455 ELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIY--VLLANMYGE 512
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+ +WKEA LMR+ + +++ G S I++ V+ FI R+
Sbjct: 513 AEMWKEAGKXRKLMRQ--RGVEKT---------PGCSSIEVNGIVYEFIVRD 553
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 279/545 (51%), Gaps = 35/545 (6%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
Y N+LRS A++ +H +K + L++ L++ Y KC +T A ++FD++
Sbjct: 8 YINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMP 67
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGM 264
+N VSW+ ++ + G +A+ +F M RE ++P FTF +AL ACS + +
Sbjct: 68 ERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAY 127
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QI+ ++++ E + +L + V+ +G
Sbjct: 128 QIYSLVVRSGLECNVFLLNAFLTALVR-------------------------------NG 156
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
++ EA ++F P R+ ++WN M+ GY + + + ++ R+ K D+ T L
Sbjct: 157 KLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIPVFWRYMNREGVKP-DEFTFASALT 215
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
A +S +KMG +VH + R+ Y +I V N+L+DMY K L F ++ + D
Sbjct: 216 GLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHK-DVC 274
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SW + G + G+ A+ ++M+ +P+KFT T L ACA ++S+E+GKQ H
Sbjct: 275 SWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLR 334
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
I+ +++V AL+++Y KC C++ A VF+ ++S V+ +MI+ N + EAL
Sbjct: 335 IKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEAL 394
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++F MK+ ++P++ITF +L AC G V ++ SM YGIIP +HY CM+ +
Sbjct: 395 QIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSI 454
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G +KE ++ + RMPF+P V + + + C+ +G G+ AA + + P +
Sbjct: 455 LGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSY 514
Query: 684 KITTN 688
+ +N
Sbjct: 515 VLLSN 519
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 228/460 (49%), Gaps = 45/460 (9%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
LY +L + A ++ + + + + +FL N + Y KC +L A LFDEM
Sbjct: 7 LYINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEM 66
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVS 162
PER+ SW++++ NG L LF M+ G V N+ T+ + L++ + + +
Sbjct: 67 PERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQA 126
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q++ L+V+ G NV L ++ + A + +T+A ++F+ ++ V+WN ++ YL
Sbjct: 127 YQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEF 186
Query: 223 GNGKEAVVMFFK-MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ E + +F++ M RE ++P FTFA+AL + +SS GMQ+H +++ + GDD+
Sbjct: 187 SS--EQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGY-GDDIC 243
Query: 282 LG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+G SL +MY+K +LE+ D+ +++ SWT + G
Sbjct: 244 VGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADG--------------------- 282
Query: 341 VISWNAMLAGYTRSLLWKE---ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
L W E AL + M+K ++ TL LN CA L+ ++ GK+
Sbjct: 283 -------------CLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQ 329
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
HG + ++ V NALLDMY KCG + SA F + + R VSW ++ A+ G
Sbjct: 330 FHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVF-RSTNSRSVVSWTTMIMACAQNG 388
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
Q EA+ F EM + P+ TF +L AC+ +++G
Sbjct: 389 QPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEG 428
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 117/271 (43%), Gaps = 31/271 (11%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K L++ FDE+P +D SW M Q G P L + M GV
Sbjct: 246 NSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVK 305
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+ T A L + A + KQ HGL +K G +V ++++L+D Y KC M A +
Sbjct: 306 PNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTV 365
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +++ VSW ++ G EA+ +F +M + P TF L+ACS
Sbjct: 366 FRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACS----- 420
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G G + E + ++ G++ P E + I SI+
Sbjct: 421 -QG-------------------GFVDEGWKYLSSMDKDYGII--PGEDHYICMVSILGR- 457
Query: 321 AISGRIREARELFNEMP-ERNVISWNAMLAG 350
+G I+EA+EL MP V W +L+
Sbjct: 458 --AGLIKEAKELILRMPFHPGVRVWQTLLSA 486
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P ++L A CA ++ E ++ + V + N ++ Y KCG +D A
Sbjct: 305 KPNKFTL-ATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAW 363
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+F R SW M+ A QNG PG L++F +M + V N IT+ VL + ++
Sbjct: 364 TVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQ 421
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 175/617 (28%), Positives = 291/617 (47%), Gaps = 109/617 (17%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++LRS+ L ++ HG ++K G L ++LV Y + + +ARR+FD I
Sbjct: 24 ADLLRSAPS---LPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPL 80
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMF--------------------------------FK 234
+N S+N ++ Y G EA +F
Sbjct: 81 RNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLA 140
Query: 235 MLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKC 292
+ D LN ++FA+AL AC+ G Q+HG++ + DDV +G+ L +MY KC
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVAR-SPHADDVHIGTALVDMYAKC 199
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
R DA R +F+ MPERNV+SWN+++ Y
Sbjct: 200 ERPVDA-------------------------------RRVFDAMPERNVVSWNSLITCYE 228
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNI 411
++ EAL M T D+VTL +++ CAGL+ + G++VH + R+ ++
Sbjct: 229 QNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDM 288
Query: 412 FVSNALLDMYRKCG-------------------------------NLRSARIWFYQMSQR 440
++NAL+DMY KCG N+ A++ F QM ++
Sbjct: 289 VLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEK 348
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQI 499
+ ++WN ++ YA+ G+ EEA+ F +++ ++ P+ +T+ +L AC NI+ L+ G+Q
Sbjct: 349 -NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQA 407
Query: 500 HCFVIRNCY------EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
H V++ + E +V +LV++Y K ++ +VF+ ++ D + N+MI+G+
Sbjct: 408 HVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGY 467
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N R ++AL +F M PD +T G+L AC H G V + F M +GI P
Sbjct: 468 AQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPS 527
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY CM+ L R G++KE E+ + MP P + + CR + LGE A RL
Sbjct: 528 RDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLF 587
Query: 674 ELNPWAPFQFKITTNRF 690
EL+P + + +N +
Sbjct: 588 ELDPENSGPYVLLSNMY 604
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 283/548 (51%), Gaps = 48/548 (8%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
EAR++ + P F N + Y + G D+AR LF+ +P+ D S+NA++ A
Sbjct: 70 EARRVFDGI----PLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALA 125
Query: 120 QNG--FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
++G G L M+ N ++A+ L + A E +L +Q+HGL+ + +
Sbjct: 126 RHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADD 185
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
V + ++LVD Y KC DARR+FD + +N VSWN ++ Y G EA+V+F +M+
Sbjct: 186 VHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMA 245
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL-GSLTEMYVKCGRLE 296
P T ++ + AC+ L++ EG Q+H ++K D DD+VL +L +MY KCGR
Sbjct: 246 TGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTW 305
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+AR + D R+++S TSI++GYA S + +A+ +F++M E+NVI+WN ++A Y ++
Sbjct: 306 EARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGE 365
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY------SSN 410
+EA+ +++ + T G +LN C ++ +++G++ H + + + S+
Sbjct: 366 EEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESD 425
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+FV N+L+DMY K G++ F +M+ RD VSWNA++ GYA+ G++++A+ F M
Sbjct: 426 VFVGNSLVDMYLKTGSIDDGAKVFERMAA-RDNVSWNAMIVGYAQNGRAKDALHLFERML 484
Query: 471 WETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
P T +L+AC + +++G++ F+ +
Sbjct: 485 CSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTE-----------------------D 521
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
+ I + S D C +LG R E L+K +PD + + +L AC
Sbjct: 522 HGI-----TPSRDHYTCMVDLLG-----RAGHLKEAEELIKDMPTEPDSVLWASLLGACR 571
Query: 590 HEGNVKLA 597
NV+L
Sbjct: 572 LHKNVELG 579
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 257/523 (49%), Gaps = 62/523 (11%)
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
R Y+ + A ++ ML + N+T+ + ACS S +E Q+H ++K+ F+
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V +L + C + DA + ++ + +SW SI++GY G + EA+ ++++M
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 337 PERNVI-------------------------------SWNAMLAGYTRSLLWKEALDFVF 365
PER++I +W+A++A + ++ +++EA+
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M K +D+V L+ CA L + MGK +H + S I + NAL+ MY KCG
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 426 NLRSARIWF------------------------------YQMSQRRDKVSWNAVLTGYAR 455
++ AR F + +D VSW+++++GYA+
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+E + F EMQ +P + T ++++ACA +++LEQGK +H ++ RN INV+
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVIL 545
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
L+++Y KC C+E A+ VF + N++ILG N +L++F MKK +
Sbjct: 546 GTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHV 605
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
P+ ITF G+L AC H G V F SM + I P ++HY CM+ L R G ++E E
Sbjct: 606 TPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAE 665
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ +NRMP P V + C+K+G + +G R+L EL P
Sbjct: 666 ELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQP 708
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/580 (27%), Positives = 288/580 (49%), Gaps = 51/580 (8%)
Query: 20 PTPSKTLTKT-ISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVF 78
P + TL K+ +S +L +D +Y+ Y L Q C+ ++ EA+++ ++++ V+
Sbjct: 194 PHFAFTLYKSMLSNYLGAD---NYT-YPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVY 249
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+ N I C+ C N+ DA +F+E D SWN++L Y + G
Sbjct: 250 VRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIG---------------- 293
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ EE +K ++ + +R ++I +S++ +G ++ +A
Sbjct: 294 --------------NVEE-----AKHIYHQMPER----SIIASNSMIVLFGMRGLVVEAC 330
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++FD++ K+ V+W+ ++ + +EA+ F M + + +AL AC+ L
Sbjct: 331 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 390
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G IH + +KI E + +L MY KCG + AR L D+ ++ISW S++S
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY + A+ +F+ MPE++V+SW++M++GY ++ L+ E L M+ + D+ T
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
L +++ CA L+ ++ GK VH +I RN + N+ + L+DMY KCG + +A FY M
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 570
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
++ +WNA++ G A G E ++ FS M + P++ TF +L AC ++ +++G
Sbjct: 571 EKGIS-TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG- 628
Query: 498 QIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
Q H + + + ++I NV G +V++ + L+ A + + +LG C
Sbjct: 629 QHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACK 688
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E G E ++PDH FH +LL+ I+ K
Sbjct: 689 KHGDSEMGRRVGRKLIE-LQPDHDGFH-VLLSNIYASKGK 726
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 11/297 (3%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y KC +D+A+ +FD MPE+D SW++M+ Y QN TL LF +M SG
Sbjct: 446 NSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK 505
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++ T +V+ + A L K +H I + G NVIL ++L+D Y KC + A +
Sbjct: 506 PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEV 565
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + K +WN ++ + G + ++ MF M + + P TF L AC +
Sbjct: 566 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 625
Query: 261 YEGM-QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
EG + +I + + G + ++ + G+L++A LL++ P ++ +W +++
Sbjct: 626 DEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 685
Query: 319 -----GYAISGRIREARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRK 369
G + GR R R+L P+ + ++ +L+ Y W + L+ +M K
Sbjct: 686 ACKKHGDSEMGR-RVGRKLIELQPDHD--GFHVLLSNIYASKGKWDDVLEIRGMMTK 739
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 267/500 (53%), Gaps = 19/500 (3%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y ++ D+ R+F+ I A++W ++R Y G +++ F ML + P + F
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED-------ARG 300
+ L +C+ L G +HG II++ + D +L MY K LE+ A
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169
Query: 301 LLDQPDERN-IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D+ ER + S++S ++ R++F MPE++++SWN ++AG R+ L++E
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSV-------RKIFEMMPEKDLVSWNTIIAGNARNGLYEE 222
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
L + M D TL +L + A +I GKE+HG R ++I+V+++L+D
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282
Query: 420 MYRKCGNLR-SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSK 477
MY KC + S R+ + + RD +SWN+++ G + G +E + F +M + +P
Sbjct: 283 MYAKCTRVADSCRV--FTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
++F +++ ACA++++L GKQ+H ++ RN ++ N+ +LV++Y KC + A ++F
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDR 400
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
D++ +MI+G + + +A+E+F M+ EGIKP+H+ F +L AC H G V A
Sbjct: 401 MRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEA 460
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
++F+SM +GI P +EHY + L R G ++E DF+ M PT + + CR
Sbjct: 461 WKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACR 520
Query: 658 KNGYATLGEWAARRLNELNP 677
+ + E A R+ E++P
Sbjct: 521 VHXNIDMAEKVANRILEVDP 540
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 209/436 (47%), Gaps = 65/436 (14%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y L D+ LF+ + +W +++ YT +G P ++L F+ M SG+ + +
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA--------- 197
+VL+S A ++L + + LHG I++ G ++ ++L++ Y K + ++
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169
Query: 198 -----------------------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
R++F+ + K+ VSWN I+ G +E + M +
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
M +++P +FT ++ L + G +IHG I+ + D V SL +MY KC R
Sbjct: 230 MGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTR 289
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+ D+ + ER+ ISW SI++G +G E F +M
Sbjct: 290 VADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQM------------------ 331
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
LM K + I+ CA L+ + +GK++HG+I RN + NIF++
Sbjct: 332 -----------LMAKIKP--KSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-T 473
++L+DMY KCGN+R+A+ F +M + RD VSW A++ G A GQ+ +A+ F +M+ E
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRM-RLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437
Query: 474 RPSKFTFETLLAACAN 489
+P+ F +L AC++
Sbjct: 438 KPNHVAFMAVLTACSH 453
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 155/274 (56%), Gaps = 4/274 (1%)
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
D R +F+ MPE+D SWN ++ +NG TL + +M + + + T ++VL
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
AE +++ K++HG +++G ++ + SSL+D Y KC + D+ R+F + ++ +SWN
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
I+ + G E + F +ML I+P +++F++ + AC+ L++ + G Q+HG I +
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
F+ + + SL +MY KCG + A+ + D+ R+++SWT+++ G A+ G+ +A ELF
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429
Query: 334 NEMPER----NVISWNAMLAGYTRSLLWKEALDF 363
+M N +++ A+L + L EA +
Sbjct: 430 EQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKY 463
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 164/341 (48%), Gaps = 14/341 (4%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P S++L + + L A + I +++ + +++ + I+ Y KC + D+
Sbjct: 236 KPDSFTL-SSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F + ERDG SWN+++ QNG L F M + + ++++++ + A
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + KQLHG I + GF N+ + SSLVD Y KC + A+++FD ++ ++ VSW ++
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G +A+ +F +M E I+P + F L ACS E + + + DF
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTR-DFGI 473
Query: 278 DDVV--LGSLTEMYVKCGRLEDAR----GLLDQPDERNIISWTSIVSGYAISGRIREARE 331
V +++++ + GRLE+A G+ P W +++S + I A +
Sbjct: 474 APGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGS---IWATLLSACRVHXNIDMAEK 530
Query: 332 LFN---EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ N E+ N ++ + Y+ + WKEA + MR+
Sbjct: 531 VANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRR 571
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 281/553 (50%), Gaps = 22/553 (3%)
Query: 17 SPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAI--VEARKLESNLVTFYPT 74
SP PT +L +T P+S L + C S + + ++ + + L++ P
Sbjct: 8 SPPPTHLPSLPQT--------PPLS------LIKTCKSMAQLKQIHSQTICTGLIS-NPI 52
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
P ++ A C + G+++ AR +FD MP + WN M+ Y++ G P + ++ +M
Sbjct: 53 VPAQII--AFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEM 110
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
GV ++ TY +L+ + + ++LH IVK GF NV ++++L+ Y +
Sbjct: 111 LERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEV 170
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
+ AR +FD + V+WNV++ Y + E++ +F +M R + P + T + L AC
Sbjct: 171 SVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSAC 230
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S L G ++H + + E V+ +L +MY CG ++ A G+ D R++ISWT
Sbjct: 231 SKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWT 290
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+IV+G+ G++ AR F++MPER+ +SW AM+ GY + +KE L M+
Sbjct: 291 AIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKP 350
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D+ T+ IL CA L +++G+ + +I +N+ + FV NAL+DMY CGN+ A I
Sbjct: 351 DEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKA-IRI 409
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+ RDK+SW AV+ G A G EEA+ FS+M + P + T +L AC + +
Sbjct: 410 FNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMV 469
Query: 494 EQGKQIHC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++GK+ ++ E NV G +V++ + L+ A V K I +LG
Sbjct: 470 DKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLG 529
Query: 553 FCHNERGREALEV 565
C R E E+
Sbjct: 530 ACRVHRDEEMAEM 542
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 256/548 (46%), Gaps = 64/548 (11%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMV--MTDARRMFDDIQNKNAVSWNVIVRRYL 220
KQ+H + G N I+ + ++ K + M AR +FD + N WN +++ Y
Sbjct: 36 KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G AV M+ +ML + P +T+ L + ++ G ++H I+K+ F
Sbjct: 96 RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSS--- 152
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
N+ +++ Y++SG + AR +F+ + +
Sbjct: 153 ----------------------------NVFVQNALIHLYSLSGEVSVARGVFDRSSKGD 184
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V++WN M++GY RS + E++ M + +TL +L+ C+ L ++ +GK VH
Sbjct: 185 VVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR 244
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-------------------- 440
++ + NAL+DMY CG++ +A F M R
Sbjct: 245 YVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGL 304
Query: 441 ----------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACAN 489
RD VSW A++ GY + + +E ++ F EMQ +P +FT ++L ACA+
Sbjct: 305 ARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAH 364
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ +LE G+ I ++ +N +I+ AL+++Y C +E AIR+F D I ++
Sbjct: 365 LGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAV 424
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G N G EAL++F M K I PD +T G+L AC H G V +FF M ++G
Sbjct: 425 IFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHG 484
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I P + HY CM+ L R G++KE + + MP P + + CR + + E AA
Sbjct: 485 IEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAA 544
Query: 670 RRLNELNP 677
+++ EL P
Sbjct: 545 QQILELEP 552
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 209/497 (42%), Gaps = 69/497 (13%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y L + A+ R+L ++V + VF+ N I Y G + ARG
Sbjct: 117 PDEYT-YPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARG 175
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD + D +WN M+ Y ++ +++LF +M V + IT +VL + ++ +
Sbjct: 176 VFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKD 235
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR- 217
L V K++H + +LE++L+D Y C M A +FD++++++ +SW IV
Sbjct: 236 LNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTG 295
Query: 218 ------------------------------RYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
YL KE + +F +M +I+P FT
Sbjct: 296 FTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTM 355
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+ L AC+ L + G I I K + + D V +L +MY CG +E A + +
Sbjct: 356 VSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH 415
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
R+ ISWT+++ G AI+G EA ++F++M + ++
Sbjct: 416 RDKISWTAVIFGLAINGYGEEALDMFSQMLKASITP------------------------ 451
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG-FIHRNDYSSNIFVSNALLDMYRKCGN 426
D+VT +L C + GK+ ++ N+ ++D+ + G+
Sbjct: 452 -------DEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGH 504
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLL-- 484
L+ A M + + + W ++L G R + EE ++ E P LL
Sbjct: 505 LKEAHEVIKNMPVKPNSIVWGSLL-GACRVHRDEEMAEMAAQQILELEPENGAVYVLLCN 563
Query: 485 --AACANISSLEQGKQI 499
AAC L + +++
Sbjct: 564 IYAACNRWEKLHEVRKL 580
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 242/475 (50%), Gaps = 32/475 (6%)
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +N VSW ++ EA+ F M P F F++A+ AC+ L S G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+H + +K + V +L +MY KCG + DA
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDAC------------------------ 96
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
++F EMP ++ +SW AM+ GY++ ++EAL M IDQ L L
Sbjct: 97 -------KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 149
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C L K G+ VH + + + S+IFV NAL DMY K G++ SA F S+ R+
Sbjct: 150 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 209
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
VS+ ++ GY Q E+ ++ F E++ + P++FTF +L+ ACAN ++LEQG Q+H
Sbjct: 210 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 269
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
V++ ++ + LV++Y KC LE AI+ F E I NS++ F + G++A
Sbjct: 270 VMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 329
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+++F M G+KP+ ITF +L C H G V+ L +F SM YG++P EHY C+I
Sbjct: 330 IKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 389
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G +KE ++F+NRMPF P CR +G +G+ AA +L +L P
Sbjct: 390 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEP 444
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 195/396 (49%), Gaps = 34/396 (8%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP+R+ SW AM+ +QN + F M G Q +++ +R+ A + +
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+H L +K G + + S+L D Y KC M DA ++F+++ K+ VSW ++ Y
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +EA++ F KM+ E++ + L AC L + G +H ++K+ FE D V
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDE-RNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+LT+MY K G +E A + E RN++S+T ++ GY + +I + +F E
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVE------ 234
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+R+ + ++ T ++ CA + ++ G ++H
Sbjct: 235 -------------------------LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 269
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + ++ + FVS+ L+DMY KCG L A F ++ + ++WN++++ + + G ++
Sbjct: 270 VMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKD 328
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
A+ F M +P+ TF +LL C++ +E+G
Sbjct: 329 AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 364
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 210/431 (48%), Gaps = 12/431 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ ++ + CAS +I +++ + F +F+ + + Y KCG + DA
Sbjct: 39 PTQFA-FSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACK 97
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F+EMP +D SW AM+ Y++ G L F M V+ +Q + L +
Sbjct: 98 VFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKA 157
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD-DIQNKNAVSWNVIVR 217
+ +H +VK GF ++ + ++L D Y K M A +F D + +N VS+ ++
Sbjct: 158 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 217
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ ++ + +F ++ R+ I P FTF++ + AC+ ++ +G Q+H ++KI+F+
Sbjct: 218 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 277
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V L +MY KCG LE A D+ + I+W S+VS + G ++A ++F M
Sbjct: 278 DPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV 337
Query: 338 ER----NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEI 392
+R N I++ ++L G + + L +E LD+ + M KT + + ++++ +
Sbjct: 338 DRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 397
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
K KE FI+R + N F + L R G+ ++ ++ + K S VL
Sbjct: 398 KEAKE---FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLS 454
Query: 453 --YARRGQSEE 461
YA Q E+
Sbjct: 455 NIYANERQWED 465
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 298/591 (50%), Gaps = 65/591 (10%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ TYA++L S + + KQLH +K GF + + + L+ Y + +A +F
Sbjct: 50 SSTTYASILDSCGSPI---LGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVF 106
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP-LNF-TFANALFACSFLSS 259
D + +N SW ++R Y+ G +EA +F ++L E +R L+F F L C L +
Sbjct: 107 DTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCA 166
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G Q+HG+ +K D GD + S EM+ + R ++ S+ ++++G
Sbjct: 167 VELGRQMHGMALKHD--GD---MKSAFEMFSRFSR-------------KSAASYNAMIAG 208
Query: 320 YAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
Y +G + +A+ELF+ M + V ISWN+M++GY L+ EA + K + D
Sbjct: 209 YWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPD 268
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TLG +L CA ++ I+ GKE H SN V AL++MY KC ++ +A++ F
Sbjct: 269 SFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFD 328
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEE---------------------------------- 461
+S+R D +WNA+++GYAR Q+E+
Sbjct: 329 GVSER-DLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYD 387
Query: 462 -AMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
AM F+EMQ RP +T +LAAC+ ++++++GKQ+H + IR ++ +V ALV
Sbjct: 388 SAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALV 447
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y KC +++ RV+ S+ +++ N+M+ + + G E + +F M ++PDH+
Sbjct: 448 DMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHV 507
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF +L +C+H G++++ + ++ Y ++P L+HY CM+ L R G + E + +
Sbjct: 508 TFLAVLSSCVHAGSLEIGHECL-ALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKN 566
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+P + C + LGE AA +L EL P P + + N +
Sbjct: 567 LPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLY 617
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 276/575 (48%), Gaps = 38/575 (6%)
Query: 14 SKSSPKPTPSKTLTKTISGHLK--SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF 71
++SS L ++ HL EP S + YA + C S + ++L ++ +
Sbjct: 21 TRSSSNRASLSLLPSNLNPHLTLLYHEPPSSTTYASILDSCGSP---ILGKQLHAHSIKS 77
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
F+ + ++ Y + + ++A +FD MP R+ SW A+L Y + GF LF
Sbjct: 78 GFNAHEFVTTKLLQMYARNCSFENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLF 137
Query: 132 LDMNHSGVSA--NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE-------- 181
+ + GV + + VL+ + + +Q+HG+ +K E
Sbjct: 138 EQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRK 197
Query: 182 -----SSLVDAYGKCMVMTDARRMFDDIQ----NKNAVSWNVIVRRYLVAGNGKEAVVMF 232
++++ Y + + A+ +FD ++ K+ +SWN ++ Y+ EA +F
Sbjct: 198 SAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLF 257
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+L+E I P +FT + L C+ ++S G + H + I + + +V G+L EMY KC
Sbjct: 258 RDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKC 317
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVISWNAML 348
+ A+ D ER++ +W +++SGYA + + REL +M E NV +WN ++
Sbjct: 318 QDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGII 377
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
AGY + + A+ M+ D T+G+IL C+ L+ I+ GK+VH + R +
Sbjct: 378 AGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHD 437
Query: 409 SNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S++ + AL+DMY KCG+++ R+ Y M + VS NA+LT YA G EE + F
Sbjct: 438 SDVHIGAALVDMYAKCGDVKHCYRV--YNMISNPNLVSHNAMLTAYAMHGHGEEGIALFR 495
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GALVEVYTK 524
M + RP TF +L++C + SLE G + C + Y + + +V++ ++
Sbjct: 496 RMLASKVRPDHVTFLAVLSSCVHAGSLEIGHE--CLALMVAYNVMPSLKHYTCMVDLLSR 553
Query: 525 CCCLEYAIRVFKE-SSSLDVIICNSMILG-FCHNE 557
L A + K + D + N+++ G F HNE
Sbjct: 554 AGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNE 588
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 181/624 (29%), Positives = 292/624 (46%), Gaps = 92/624 (14%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L FY + + N I Y + G ++ AR +FDEM +++ SWN+++ Y QN P
Sbjct: 89 LNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEA 148
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
+F M+ N I + LV
Sbjct: 149 QNMFDKMSER---------------------------------------NTISWNGLVSG 169
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y ++ +AR +FD + +N VSW +VR Y+ G EA +F++M +++
Sbjct: 170 YINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVML 229
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
L EG +I D E D V ++ Y + GRL +AR L D+
Sbjct: 230 GGLL---------QEG-RIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEM 279
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN++SWT++++GY + ++ AR+LF MPE+N +SW AML GYT EA +
Sbjct: 280 PRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFN 339
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M IK ++ NA++ + + G
Sbjct: 340 AM-----------------------PIK----------------SVVACNAMILCFGQNG 360
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+ AR F QM ++ D+ +W+A++ Y R+G +A+ F MQ E RP+ + ++L
Sbjct: 361 EVPKARQVFDQMREK-DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ CA +++L+ G++IH ++R+ ++++V L+ +Y KC L A +VF + DV+
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ NS+I G+ + G EAL VF M GI PD +TF G+L AC + GNVK L+ F+SM
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSM 539
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
KY + ++EHY CM+ L R G + E D + +MP + + CR + L
Sbjct: 540 ETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDL 599
Query: 665 GEWAARRLNELNPWAPFQFKITTN 688
E AA++L L P F + +N
Sbjct: 600 AEVAAKKLLVLEPKNAGPFILLSN 623
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 2/256 (0%)
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
S L P V N I C+G+ G + AR +FD+M E+D G+W+AM+ Y + G
Sbjct: 335 SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL 394
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
LELF M G+ N + +VL A L +++H +V+ F +V + S L+
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLL 454
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC + A+++FD K+ V WN I+ Y G G EA+ +F M I P +
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514
Query: 246 TFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
TF L ACS+ + +G++I + + K E + ++ + G+L +A L+++
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574
Query: 305 -PDERNIISWTSIVSG 319
P E + I W +++
Sbjct: 575 MPMEADAIIWGALLGA 590
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 178/370 (48%), Gaps = 28/370 (7%)
Query: 230 VMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLG--SL 285
+MFF+++ LN F +N + + + L + Y + QI + D D ++ S+
Sbjct: 82 LMFFRLV------LNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSI 135
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
Y + R ++A+ + D+ ERN ISW +VSGY +G I EARE+F+ MPERNV+SW
Sbjct: 136 VAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWT 195
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AM+ GY + + EA + M + V LG +L E ++ + F
Sbjct: 196 AMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ------EGRIDEACRLFDMMP 249
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ ++ ++ Y + G L AR+ F +M RR+ VSW ++TGY + Q + A
Sbjct: 250 E--KDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTTMITGYVQNQQVDIARKL 306
Query: 466 FSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCRGALVEVYTK 524
F M ++ ++ +L N L++ ++ N I +VV A++ + +
Sbjct: 307 FEVM---PEKNEVSWTAMLKGYTNCGRLDEASELF-----NAMPIKSVVACNAMILCFGQ 358
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+ A +VF + D ++MI + +ALE+F +M++EGI+P+ + +
Sbjct: 359 NGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISV 418
Query: 585 LLACIHEGNV 594
L C N+
Sbjct: 419 LSVCAGLANL 428
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +CA + R++ + LV V++ + + Y KCGNL A+ +FD +D
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
WN+++ Y Q+G L +F DM+ SG+ + +T+ VL
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVL 520
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 256/511 (50%), Gaps = 67/511 (13%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A R+F+ I +N++++ + G+ ++AV++F ++ E + P NFT+ A
Sbjct: 85 AERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGC 144
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L EG +++G ++K E D V SL +MY + GR
Sbjct: 145 LGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGR---------------------- 182
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDID 375
++ R++F EMP+R+V+SWN +++GY + +++A+D F + ++++ +
Sbjct: 183 ---------VQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPN 233
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF- 434
+ T+ L+ C L +++GKE+H ++ R I + NAL+DMY KCG+L AR F
Sbjct: 234 EATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKCGHLSIAREIFN 292
Query: 435 -----------------------------YQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++ S RD V W A++ GY + + ++A+
Sbjct: 293 DMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVAL 352
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ + P +FT LL CA + +LEQGK IH ++ N I+ V AL+E+Y K
Sbjct: 353 FREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAK 412
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C +E ++ +F D S+I G N + +ALE+F M + G+KPD ITF G+
Sbjct: 413 CGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGV 472
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP--- 641
L AC H G V+ + F SM Y I P+LEHY C+I L R G + E E+ + + P
Sbjct: 473 LSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVN 532
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
VP+ + CR +G +GE A+RL
Sbjct: 533 NEVIVPLYGALLSACRTHGNVEMGERVAKRL 563
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 243/463 (52%), Gaps = 21/463 (4%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
GNL A +F+ + +N ++ A+T+NG + + LF + G+S + TY V
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ E+ ++++G +VK G + + +SL+D Y + + + R++F+++ ++ V
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIH-- 267
SWNV++ Y+ ++AV +F +M ++ +RP T + L AC L G +IH
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 268 -----GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G IKI +L +MY KCG L AR + + + +I WTS+VSGY
Sbjct: 260 VREQLGFTIKIG--------NALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVN 311
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
G++ EARELF P R+V+ W AM+ GY + + +A+ M+ D+ TL +
Sbjct: 312 CGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVAL 371
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L CA L ++ GK +HG+I N + V AL++MY KCG + + F + + +D
Sbjct: 372 LTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKE-KD 430
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
SW +++ G A G++ +A+ F+EM Q +P TF +L+AC++ +E+G++ H
Sbjct: 431 TASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRK-HF 489
Query: 502 FVIRNCYEINVVCR--GALVEVYTKCCCLEYAIRVFKESSSLD 542
+ Y+I G L+++ + L+ A + ++S +++
Sbjct: 490 RSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVN 532
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 39/332 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y +F+ + E K+ +V ++ N ++ Y + G + + R +F+EMP
Sbjct: 135 YPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMP 194
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRS--SAEELELGV 161
+RD SWN ++ Y + +++F M S + N+ T + L + + + LELG
Sbjct: 195 QRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELG- 253
Query: 162 SKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
K++H + ++ GF + + ++LVD Y KC ++ AR +F+D+ K + W +V Y+
Sbjct: 254 -KEIHRYVREQLGF--TIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYV 310
Query: 221 VAG------------------------NG-------KEAVVMFFKMLREDIRPLNFTFAN 249
G NG +AV +F +M + + P FT
Sbjct: 311 NCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVA 370
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L C+ L + +G IHG I + D VV +L EMY KCG +E + + + E++
Sbjct: 371 LLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKD 430
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNV 341
SWTSI+ G A++G+ +A ELF EM + V
Sbjct: 431 TASWTSIICGLAMNGKTSKALELFAEMVQTGV 462
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P V + Y CG LD+AR LF+ P RD W AM+ Y Q + LF
Sbjct: 295 PIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFR 354
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M VS ++ T +L A+ L K +HG I + + ++ ++L++ Y KC
Sbjct: 355 EMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCG 414
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ + +F+ ++ K+ SW I+ + G +A+ +F +M++ ++P + TF L
Sbjct: 415 FIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLS 474
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
ACS EG + + E G L ++ + G+L++A L+++ N
Sbjct: 475 ACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVN 532
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 458 QSEEAMTSFSEMQWETRP------SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Q++ + F+ + + ++P S FT ++ + N S++ KQI ++R + +
Sbjct: 4 QTKFQLFKFTSLHFLSKPLHLSTSSHFTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQS 63
Query: 512 VVCRGALVEVYTKCCC------LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
G + + CC L YA R+F + I N +I F N R+A+ +
Sbjct: 64 ----GDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLL 119
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC--MIKL 623
F +++EG+ PD+ T+ + A G V+ + + K G+ + + Y C ++ +
Sbjct: 120 FRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVY-GFVVKSGL--EFDTYVCNSLMDM 176
Query: 624 YCRYGYMKELEDFVNRMPFNPTVP--MLRKIFDKCRK 658
Y G ++ L MP V +L + KCR+
Sbjct: 177 YAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRR 213
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 172/621 (27%), Positives = 298/621 (47%), Gaps = 42/621 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPE-RDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+ N + Y KCG++ AR +FD M RD SW AM T+NG L L +M
Sbjct: 79 ALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEML 138
Query: 136 HSGVSANQITYANVLRSS-AEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMV 193
SG+ N T + EL + G +K GF G +V + +L+D + +
Sbjct: 139 ESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGD 198
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ AR++F+ + + V W +++ RY+ G +AV +F ML + P +T ++ + A
Sbjct: 199 LVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSA 258
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ S G Q+H +++++ D V L +MY K ++E +
Sbjct: 259 CAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKL-QMEQS--------------- 302
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR-SLLWKEALDFVFLMRKTTK 372
+ AR++F MP NV+SW A+++GY + A++ + M +
Sbjct: 303 ------------MECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESI 350
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ + +T +L CA LS+ G+++H + + + V NAL+ MY + G + AR
Sbjct: 351 EPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARK 410
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANI 490
F Q+ +R +L+ + G++ + S+S + S FTF +LL+A A +
Sbjct: 411 AFDQLYERN-------LLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATV 463
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSM 549
+G+Q+H I+ +E + +LV +Y++C L+ A R F E +VI S+
Sbjct: 464 GLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSI 523
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I + AL +F M G+KP+ +T+ +L AC H G VK ++F SM+ +
Sbjct: 524 ISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHR 583
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
+IP++EHY CM+ L R G ++E +F+N MP + + + CR +GE AA
Sbjct: 584 LIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAA 643
Query: 670 RRLNELNPWAPFQFKITTNRF 690
R + +L P P + + +N +
Sbjct: 644 RHVIDLEPQDPAPYVLLSNLY 664
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 181/624 (29%), Positives = 292/624 (46%), Gaps = 92/624 (14%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L FY + + N I Y + G ++ AR +FDEM +++ SWN+++ Y QN P
Sbjct: 89 LNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEA 148
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
+F M+ N I + LV
Sbjct: 149 QNMFDKMSER---------------------------------------NTISWNGLVSG 169
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y ++ +AR +FD + +N VSW +VR Y+ G EA +F++M +++
Sbjct: 170 YINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVML 229
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
L EG +I D E D V ++ Y + GRL +AR L D+
Sbjct: 230 GGLL---------QEG-RIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEM 279
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN++SWT++++GY + ++ AR+LF MPE+N +SW AML GYT EA +
Sbjct: 280 PRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFN 339
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M IK ++ NA++ + + G
Sbjct: 340 AM-----------------------PIK----------------SVVACNAMILCFGQNG 360
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+ AR F QM ++ D+ +W+A++ Y R+G +A+ F MQ E RP+ + ++L
Sbjct: 361 EVPKARQVFDQMREK-DEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
+ CA +++L+ G++IH ++R+ ++++V L+ +Y KC L A +VF + DV+
Sbjct: 420 SVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV 479
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ NS+I G+ + G EAL VF M GI PD +TF G+L AC + GNVK L+ F+SM
Sbjct: 480 MWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSM 539
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
KY + ++EHY CM+ L R G + E D + +MP + + CR + L
Sbjct: 540 ETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDL 599
Query: 665 GEWAARRLNELNPWAPFQFKITTN 688
E AA++L L P F + +N
Sbjct: 600 AEVAAKKLLVLEPKNAGPFILLSN 623
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 2/256 (0%)
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
S L P V N I C+G+ G + AR +FD+M E+D G+W+AM+ Y + G
Sbjct: 335 SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL 394
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
LELF M G+ N + +VL A L +++H +V+ F +V + S L+
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLL 454
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC + A+++FD K+ V WN I+ Y G G EA+ +F M I P +
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514
Query: 246 TFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
TF L ACS+ + +G++I + + K E + ++ + G+L +A L+++
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574
Query: 305 -PDERNIISWTSIVSG 319
P E + I W +++
Sbjct: 575 MPMEADAIIWGALLGA 590
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 178/370 (48%), Gaps = 28/370 (7%)
Query: 230 VMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLG--SL 285
+MFF+++ LN F +N + + + L + Y + QI + D D ++ S+
Sbjct: 82 LMFFRLV------LNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSI 135
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
Y + R ++A+ + D+ ERN ISW +VSGY +G I EARE+F+ MPERNV+SW
Sbjct: 136 VAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWT 195
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AM+ GY + + EA + M + V LG +L E ++ + F
Sbjct: 196 AMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQ------EGRIDEACRLFDMMP 249
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ ++ ++ Y + G L AR+ F +M RR+ VSW ++TGY + Q + A
Sbjct: 250 E--KDVVTRTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTTMITGYVQNQQVDIARKL 306
Query: 466 FSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCRGALVEVYTK 524
F M ++ ++ +L N L++ ++ N I +VV A++ + +
Sbjct: 307 FEVM---PEKNEVSWTAMLKGYTNCGRLDEASELF-----NAMPIKSVVACNAMILCFGQ 358
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
+ A +VF + D ++MI + +ALE+F +M++EGI+P+ + +
Sbjct: 359 NGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISV 418
Query: 585 LLACIHEGNV 594
L C N+
Sbjct: 419 LSVCAGLANL 428
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +CA + R++ + LV V++ + + Y KCGNL A+ +FD +D
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
WN+++ Y Q+G L +F DM+ SG+ + +T+ VL
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVL 520
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 303/603 (50%), Gaps = 32/603 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G L AR +FD +P D ++NA++ AY+ G ++L+ M V+ N+ T+ VL
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ + ++L + +H G ++ + ++L+D Y +C AR +F + ++ V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+WN ++ Y G A+ M +RP T + L + + ++G IH
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ R L+Q +E+ +I T+++ YA ++ A
Sbjct: 228 CL---------------------------RACLEQNEEQVLIG-TALLDMYAKCKQLVYA 259
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAG 388
+F+ MP RN ++W+A++ G+ EA + F ++ + + ++ L VCA
Sbjct: 260 CRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCAS 319
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L+++ MG ++H I ++ +++ SN+LL MY K G + A ++F +++ + D +S+ A
Sbjct: 320 LADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVK-DTISYGA 378
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+L+G + G++EEA F +MQ P T +L+ AC+++++L+ GK H VI
Sbjct: 379 LLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRG 438
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +L+++Y KC ++ + +VF + + DV+ N+MI G+ + G+EA +F
Sbjct: 439 LALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFL 498
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK +G PD +TF ++ AC H G V +FD+M KYGI+P++EHY CM+ L R
Sbjct: 499 GMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 558
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
G + E F+ MP V + + CR + LG+ +R + +L P F + +
Sbjct: 559 GLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618
Query: 688 NRF 690
N F
Sbjct: 619 NIF 621
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 38/428 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-N 135
+F+ I+ Y +C AR +F +MP RD +WNAML Y +G + LDM +
Sbjct: 135 LFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN---VILESSLVDAYGKCM 192
H G+ N T ++L A+ L +H ++ N V++ ++L+D Y KC
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT-FANAL 251
+ A R+F + +N V+W+ ++ +++ EA +F ML E + L+ T A+AL
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
C+ L+ + G Q+H +I K D SL MY K G + +A D+ ++ I
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S+ +++SG +G+ EA +F +M N+
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNM------------------------------ 404
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D T+ ++ C+ L+ ++ GK HG + + + N+L+DMY KCG + +R
Sbjct: 405 -EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANI 490
F +M RD VSWN ++ GY G +EA T F M+ + P TF L+AAC++
Sbjct: 464 QVFDKMPA-RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522
Query: 491 SSLEQGKQ 498
+ +GK
Sbjct: 523 GLVTEGKH 530
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 167/356 (46%), Gaps = 9/356 (2%)
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W + + G++ AR++F+ +P + ++NA++ Y+ + A+D M +
Sbjct: 37 WQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRV 96
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
++ T +L C+ L +++ G+ +H +++FVS AL+D+Y +C AR
Sbjct: 97 APNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN 156
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANI 490
F +M RD V+WNA+L GYA G A+ +MQ RP+ T +LL A
Sbjct: 157 VFAKMPM-RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQH 215
Query: 491 SSLEQGKQIHCFVIRNCYEIN---VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+L QG IH + +R C E N V+ AL+++Y KC L YA RVF + + +
Sbjct: 216 GALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275
Query: 548 SMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
++I GF +R EA +F M EG+ + L C ++ + Q ++
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH-ALIA 334
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
K GI L ++ +Y + G + E F + + T+ + C +NG A
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY-GALLSGCVQNGKA 389
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
+S + A ++CAS + +L + + + N + Y K G +++A
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF 364
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
FDE+ +D S+ A+L QNG +F M + + T +++ + + L
Sbjct: 365 FDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAAL 424
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K HG ++ RG + +SL+D Y KC + +R++FD + ++ VSWN ++ Y
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ G GKEA +F M + P + TF + ACS EG
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEG 528
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 248/486 (51%), Gaps = 34/486 (6%)
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQ 265
++A S+N+++R +L AG+ ++A+ +F +ML + + P T AN + +CS + G
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+ K F D VL SL MY CG +V+ +
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCG---------------------DVVAAHV---- 227
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
LF+ + + VI+WNAM+AGY ++ WKE ++ M + D+VTL +
Sbjct: 228 ------LFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATA 281
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C L + +G+ + + + ++ AL+DMY KCG L AR F +M RD V+
Sbjct: 282 CGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRM-HSRDVVA 340
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W+A+++GY + + EA+ F+EMQ E P+ T ++L+ACA + +LE GK +H ++
Sbjct: 341 WSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIR 400
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
R + V+ ALV+ Y KC C++ A++ F+ + ++I G N R REALE
Sbjct: 401 RKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALE 460
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+F M + I+P +TF G+LLAC H V+ + F SM YGI P++EHY CM+ L
Sbjct: 461 LFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLL 520
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFK 684
R G + E F+ MP P + R + C + +GE A +++ L+P +
Sbjct: 521 GRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYI 580
Query: 685 ITTNRF 690
+ +N +
Sbjct: 581 LLSNTY 586
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 192/397 (48%), Gaps = 34/397 (8%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVS 162
P R S+N ++ ++ + G P L LF++M + + VS +Q T AN ++S + +L V
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ + KRGF + + +SL+ Y C + A +F +Q K ++WN ++ Y+
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G+ KE V MF ML T + AC L G I + +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY KCG L+ AR L D+ R++++W++++SGY S R REA +FNE
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNE------- 363
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
M+ T + + VT+ +L+ CA L ++ GK VH +I
Sbjct: 364 ------------------------MQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYI 399
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R D + + AL+D Y KCG ++ A F M R+ +W A++ G A G+S EA
Sbjct: 400 RRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV-RNTWTWTALIKGMASNGRSREA 458
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ FS M + P+ TF +L AC++ +E+G++
Sbjct: 459 LELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRR 495
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 137/264 (51%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+LN I Y CG++ A LF + + +WNAM+ Y +NG +E+F M
Sbjct: 207 FVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEV 266
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+++T +V + + + + + ++G + L ++LVD Y KC + A
Sbjct: 267 RAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKA 326
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+FD + +++ V+W+ ++ Y + +EA+ +F +M ++ P + T + L AC+ L
Sbjct: 327 RRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVL 386
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G +H I + D ++ +L + Y KCG ++DA + RN +WT+++
Sbjct: 387 GALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALI 446
Query: 318 SGYAISGRIREARELFNEMPERNV 341
G A +GR REA ELF+ M E N+
Sbjct: 447 KGMASNGRSREALELFSSMLEANI 470
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 129/270 (47%), Gaps = 31/270 (11%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG LD AR LFD M RD +W+AM+ YTQ+ L +F +M + V+ N
Sbjct: 314 VDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPND 373
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T +VL + A L K +H I ++ VIL ++LVD Y KC + DA + F+
Sbjct: 374 VTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFES 433
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +N +W +++ G +EA+ +F ML +I P + TF L ACS
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACS-------- 485
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
HG +++ EG S+T+ Y C R+E + +V +
Sbjct: 486 ---HGCLVE---EGRR-HFTSMTQDYGICPRIE---------------HYGCMVDLLGRA 523
Query: 324 GRIREARELFNEMP-ERNVISWNAMLAGYT 352
G I EA + MP E N + W A+L+ T
Sbjct: 524 GLIDEAYQFIRNMPIEPNAVVWRALLSACT 553
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 131/254 (51%), Gaps = 3/254 (1%)
Query: 337 PERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
P R+ S+N ++ + R+ ++AL FV ++ T DQ T+ + C+ + ++ +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ V + + + + FV N+L+ MY CG++ +A + F+ + Q + ++WNA++ GY +
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV-QVKGVIAWNAMIAGYVK 249
Query: 456 RGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G +E + F M P + T ++ AC + G+ I + +
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
ALV++Y KC L+ A R+F S DV+ ++MI G+ ++R REAL +F M+ +
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369
Query: 575 KPDHITFHGILLAC 588
P+ +T +L AC
Sbjct: 370 NPNDVTMVSVLSAC 383
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L ++ Y KCG + DA F+ MP R+ +W A++ NG LELF M
Sbjct: 408 VILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLE 467
Query: 137 SGVSANQITYANVLRSSAEE--LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ + +T+ VL + + +E G + + G C + +VD G+ ++
Sbjct: 468 ANIEPTDVTFIGVLLACSHGCLVEEG-RRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLI 526
Query: 195 TDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN---GKEAV 229
+A + ++ NAV W ++ V N G+EA+
Sbjct: 527 DEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEAL 565
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 283/587 (48%), Gaps = 43/587 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+NA + + Q G +EL S + TY +VL+ A L K++H +I
Sbjct: 69 YNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKKVHSIIK 126
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ L LV Y C + + RR+FD ++ KN WN +V Y G+ KE++
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 231 MFFKMLREDIRPLNFTFANALF---------ACSFLSSPY--EGMQIHGVII--KIDFEG 277
+F M+ + I A+ LF + + + S Y G+ G+ I ++ + G
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 278 DDVVLGSLTEMYVKC---GRLEDARGL----LDQPDERNIISWTSIVSGYAISGRIREAR 330
DV L ++ + V C G L + + + ER I +++ Y+ G + A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +M ERNV+SW +M+AGYTR A+ + M K +D V + IL+ CA
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ GK+VH +I N+ +SN+FV NAL+DMY KCG++ A F M + D +SWN
Sbjct: 367 SLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNT-- 423
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
M E +P T +L ACA++S+LE+GK+IH +++RN Y
Sbjct: 424 ------------------MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSS 465
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ ALV++Y KC L A +F S D++ MI G+ + G EA+ F M+
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
GI+PD ++F IL AC H G ++ +FF M+ + I P+LEHY CM+ L R G +
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ F+ +P P + + CR L E A R+ EL P
Sbjct: 586 SKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEP 632
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 216/543 (39%), Gaps = 104/543 (19%)
Query: 45 YAHLFQLCASSKAIVEARKLES---------------NLVTFYPT--------------- 74
Y + QLCA K++ + +K+ S LV+FY T
Sbjct: 102 YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 75 -PPVFLLNRAIECYGKCGNL--------------------DDARGLFDEMPERDGGSWNA 113
V+L N + Y K G+ + A LFD++ +RD SWN+
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNS 221
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ Y NG R L ++ M + G+ + T +VL A L + K +H L +K
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F + ++L+D Y KC + A R+F+ + +N VSW ++ Y G A+++
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 341
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M +E ++ + L AC+ S G +H I + + V +L +MY KCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 401
Query: 294 RLEDARGLLDQPDERNIISWTSIVS------------------------GYAISGRIRE- 328
+E A + ++IISW ++V G I G I
Sbjct: 402 SMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRN 461
Query: 329 ------------------------ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
AR LF+ +P ++++SW M+AGY EA+
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYR 422
MR + D+V+ IL C+ ++ G +I +ND++ + + ++D+
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLS 580
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET 482
+ GNL A + + D W A+L G R E +E +E P +
Sbjct: 581 RTGNLSKAYKFIETLPIAPDATIWGALLCG-CRIYHDIELAEKVAERVFELEPENTGYYV 639
Query: 483 LLA 485
LLA
Sbjct: 640 LLA 642
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+ G LK D A + CAS A+ +++ ++ + + N ++ Y
Sbjct: 423 TMVGELKPDSRT----MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG L AR LFD +P +D SW M+ Y +G+ + F +M +G+ +++++ +
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 149 VL 150
+L
Sbjct: 539 IL 540
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/653 (25%), Positives = 313/653 (47%), Gaps = 40/653 (6%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ + L Q C+S+K + R++ ++ + I+ Y +CG++ +A+ +F+
Sbjct: 6 AFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEI 65
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +D +W M+G Y Q G R L +F M V ++TY +L + A L
Sbjct: 66 LERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDG 125
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++HG I+++GF G+V + ++L++ Y KC + A F +++++ VSW ++ +
Sbjct: 126 MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQH 185
Query: 223 GNGKEAVVMFFKMLREDIRPLN---FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
A ++ +M + + P +T NA +LS EG I+ ++ E D
Sbjct: 186 DQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLS---EGKFIYSLVSSRVMESDV 242
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V+ S M+ G L DAR LF +M +R
Sbjct: 243 RVMNSAMNMFGNAGLLGDAR-------------------------------RLFEDMVDR 271
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V++WN ++ Y ++ + EA+ +++ + +T L+LNV L+ + GK +H
Sbjct: 272 DVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIH 331
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ Y ++ V+ AL+ +Y +C A F M + D ++W + YA+ G
Sbjct: 332 ELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFR 390
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
+EA+ F EMQ E RP+ T +L CA++++L++G+QIH +I N + + +V AL
Sbjct: 391 KEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETAL 450
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ +Y KC + A VF++ + D+++ NSM+ + + E L++F M+ +G K D
Sbjct: 451 INMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADA 510
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
++F +L A H G+V Q+F +M + I P E Y C++ L R G ++E D V
Sbjct: 511 VSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVL 570
Query: 639 RMPFN-PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
++ P + + CR + + AA ++ E +P + + +N +
Sbjct: 571 KLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVY 623
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 33/342 (9%)
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
+P F L CS + G ++H + FE +++V G L +MY +CG + +A+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ + + +++ +WT ++ Y G A +F +M E +V+
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMP----------------- 104
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+VT ILN CA +K G E+HG I + + ++FV AL++M
Sbjct: 105 --------------TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINM 150
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFT 479
Y KCG++R A F ++ + RD VSW A++ + Q A + MQ + P+K T
Sbjct: 151 YNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKIT 209
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
T+ A + L +GK I+ V E +V + + ++ L A R+F++
Sbjct: 210 LYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMV 269
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
DV+ N +I + NE EA+ +FG ++++GIK + ITF
Sbjct: 270 DRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITF 311
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
+P F LL C++ +++ G+++H V +E N + G L+++Y +C + A +
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF+ DV MI +C AL +F M++E + P +T+ IL AC +
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
+K ++ + + G + +I +Y + G ++ D R+ V I
Sbjct: 122 LKDGMEIHGQI-LQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI- 179
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
C ++ L W RR+ +L+ P + + T
Sbjct: 180 AACVQHDQFALARWLYRRM-QLDGVVPNKITLYT 212
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 189/643 (29%), Positives = 299/643 (46%), Gaps = 79/643 (12%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT--QNGFPGRTLELF 131
TP V N + Y +CG+L A LF+ MP RD ++N+++ A + P L+
Sbjct: 95 TPAV--ANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLP--ALDAL 150
Query: 132 LDMNHSGVSANQITYANVLRSS---AEELELGVSKQLHGLIVKRGFCGN--VILESSLVD 186
DM G + T +VL + AE+L LG ++ H +K GF ++L+
Sbjct: 151 RDMLLEGHPLSSFTLVSVLLACSHLAEDLRLG--REAHAFALKNGFLDGDERFAFNALLS 208
Query: 187 AYGKCMVMTDARRMFDDIQNKNA-----VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
Y + ++ DA+ +F + ++ V+WN +V + +G EA+ + + M+ +R
Sbjct: 209 MYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVR 268
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARG 300
P TFA+AL ACS L G ++H ++K D + V +L +MY R+ AR
Sbjct: 269 PDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARR 328
Query: 301 LLDQ--PDERNIISWTSIVSGYAISGRIREARELFNEM-PERNVISWNAMLAGYTRSLLW 357
+ D R + W ++V GYA +G EA ELF M E V+ +AG
Sbjct: 329 VFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAG------- 381
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE-VHGFIHRNDYSSNIFVSNA 416
+L CA SE GKE VHG++ + + N FV NA
Sbjct: 382 ------------------------VLPACA-RSETFAGKEAVHGYVLKRGMADNPFVQNA 416
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-- 474
L+D+Y + G++ +AR W + + RD VSWN ++TG +G +A EMQ + R
Sbjct: 417 LMDLYARLGDMEAAR-WIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFT 475
Query: 475 -----------------PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
P+ T TLL CA +++ +GK+IH + +R+ + ++ A
Sbjct: 476 DATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSA 535
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG--LMKKEGIK 575
LV++Y KC CL + VF +VI N +I+ + + G EA+ +F +M E K
Sbjct: 536 LVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEA-K 594
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ +TF L AC H G V ++ F SM+ +G+ P + + C + + R G + E
Sbjct: 595 PNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYS 654
Query: 636 FVNRM-PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ M P V CR + LGE AA RL +L P
Sbjct: 655 IITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEP 697
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 276/521 (52%), Gaps = 12/521 (2%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYL 220
+KQLH I++ +L S+++ Y ++ D+ +F+ + + ++W I+R Y
Sbjct: 24 AKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G ++ F +ML P + F + L +C+ + G +HG II++ D
Sbjct: 83 SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142
Query: 281 VLGSLTEMYVKCGRLEDA---RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+L MY K LE+ + + D+ ++ S S Y + R++F MP
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMP 197
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+R+++SWN +++G ++ + ++AL V M D TL +L + A + GKE
Sbjct: 198 KRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKE 257
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG+ RN Y +++F+ ++L+DMY KC + + FY + Q D +SWN+++ G + G
Sbjct: 258 IHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQH-DGISWNSIIAGCVQNG 316
Query: 458 QSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+E + F +M + +P+ +F +++ ACA++++L GKQ+H ++IR+ ++ NV
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
ALV++Y KC + A +F + D++ +MI+G+ + +A+ +F M+ EG+KP
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+++ F +L AC H G V A ++F+SM Y IIP LEHY + L R G ++E +F
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 496
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
++ M PT + + CR + L E +++L ++P
Sbjct: 497 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDP 537
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 234/481 (48%), Gaps = 66/481 (13%)
Query: 48 LFQLCASSKAIVEARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
L Q +S K+ +A++L + ++ T P+P LL+ + Y L D+ +F+ +P
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPS--LLSTILSIYSNLNLLHDSLLIFNSLPSP 68
Query: 107 DGG-SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQL 165
+W +++ YT +G +L F+ M SG + + +VL+S +L + +
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDA---------------------------- 197
HG I++ G ++ ++L++ Y K + +
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 198 -RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
R++F+ + ++ VSWN ++ G ++A++M +M D+RP +FT ++ L +
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ +G +IHG I+ ++ D + SL +MY KC R++D+ + + + ISW SI
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++G +G E + F +M L+ K +
Sbjct: 309 IAGCVQNGMFDEGLKFFQQM-----------------------------LIAKIKP--NH 337
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V+ I+ CA L+ + +GK++HG+I R+ + N+F+++AL+DMY KCGN+R+AR W +
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTAR-WIFD 396
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
+ D VSW A++ GYA G + +A++ F M+ E +P+ F +L AC++ +++
Sbjct: 397 KMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDE 456
Query: 496 G 496
Sbjct: 457 A 457
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 154/275 (56%), Gaps = 4/275 (1%)
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
L R +F+ MP+RD SWN ++ QNG L + +M ++ + + T ++VL
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
AE + L K++HG ++ G+ +V + SSL+D Y KC + D+ R+F + + +SW
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 305
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N I+ + G E + F +ML I+P + +F++ + AC+ L++ + G Q+HG II+
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F+G+ + +L +MY KCG + AR + D+ + +++SWT+++ GYA+ G +A L
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 425
Query: 333 FNEMP----ERNVISWNAMLAGYTRSLLWKEALDF 363
F M + N +++ A+L + + L EA +
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKY 460
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 154/302 (50%), Gaps = 15/302 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + I+ Y KC +DD+ +F +P+ DG SWN+++ QNG L+ F M
Sbjct: 271 VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI 330
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + N +++++++ + A L + KQLHG I++ F GNV + S+LVD Y KC +
Sbjct: 331 AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRT 390
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD ++ + VSW ++ Y + G+ +A+ +F +M E ++P F L ACS
Sbjct: 391 ARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH 450
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLG-----SLTEMYVKCGRLEDARGLL-DQPDERNI 310
E + + + D+ ++ G ++ ++ + GRLE+A + D E
Sbjct: 451 AGLVDEAWKYFNSMTQ-DYR---IIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTG 506
Query: 311 ISWTSIVSGYAISGRIREA----RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
W+++++ + I A ++LF P+ N+ ++ + Y+ + WK+A
Sbjct: 507 SVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ-NIGAYVLLSNIYSAAGRWKDARKLRIA 565
Query: 367 MR 368
MR
Sbjct: 566 MR 567
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 57/314 (18%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + CA + ++L ++ VF+ + ++ Y KCGN+ AR +FD+M
Sbjct: 340 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 399
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
D SW AM+ Y +G + LF M GV N + + VL + +
Sbjct: 400 LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS---------- 449
Query: 165 LHGLIVKRGFCGNVILESSLVD-AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+ LVD A+ MT R+ +++ AV+ +++ R G
Sbjct: 450 ----------------HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA-DLLGR----VG 488
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA M I P ++ L AC ++ +++ + K F D +G
Sbjct: 489 RLEEAYEFISDM---HIEPTGSVWSTLLAACRV----HKNIELAEKVSKKLFTVDPQNIG 541
Query: 284 S---LTEMYVKCGRLEDARGLLDQPDERNI-----ISWTSI-------VSG---YAISGR 325
+ L+ +Y GR +DAR L ++ + SW I V+G + R
Sbjct: 542 AYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDR 601
Query: 326 IREARELFNEMPER 339
I EA ++ E ER
Sbjct: 602 INEALKVLLEQMER 615
>gi|255547600|ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545908|gb|EEF47411.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 832
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 267/516 (51%), Gaps = 26/516 (5%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGK-CMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
++ LH ++K G N+ + + L+D Y K ++ A ++FD+I ++ +W +++ +
Sbjct: 299 AELLHSNVIKIGSFHNLGITNHLLDLYAKNSQNLSHAHKLFDEILCRDVRTWTILISGFA 358
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
N K +F +M +E + P FT ++ L CS + G IHG I+ D V
Sbjct: 359 QTRNFKMVSGLFRRMQKEGVCPNQFTLSSVLKCCSSICEIRNGKGIHGWILTSGIGFDIV 418
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ S+ ++YVKCG + A+ L D E+ +SW ++ GY G + + ELF + +N
Sbjct: 419 LENSILDLYVKCGAFDYAKSLFDSMAEKGTVSWNIMIGGYLRMGDVESSLELFQSLYFKN 478
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ SWN ++ G ++ AL+ ++ M ++ + VT + LN+ + L +++GK++HG
Sbjct: 479 IASWNTIIDGLMKNGFETIALELLYKMVESGLGFNSVTFSVALNLVSCLVNLELGKQIHG 538
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-------RDKVSWNAVLTGY 453
I R N F+ N+LLDMY KCG + A F + + VSW+++++GY
Sbjct: 539 RILRLIIHDNGFIRNSLLDMYCKCGKMEEASRMFRNVPVEISCDDPLGEIVSWSSMISGY 598
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
R G+ E A+ +F M E KFT ++++ACAN LE G+QIH +++ ++++
Sbjct: 599 VRNGEYEYALRTFISMVHEQVLVDKFTLTSVVSACANTGCLELGRQIHAHILKIGHKVDA 658
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+L+++Y KC L A +FKE+ +V++ SMI G + +GREA+ VF M E
Sbjct: 659 HLGSSLIDMYAKCGSLNDAQMIFKENDDPNVVLWTSMIFGCALHGQGREAVRVFKCMMNE 718
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL----------EHYECMIK 622
GI P+ ITF +L AC H G ++ ++F+ M YGI P + EH+ K
Sbjct: 719 GITPNEITFISVLTACNHAGLLEEGCKYFELMPKLYGIKPGITSLGYPPHLTEHFNSEKK 778
Query: 623 LYCRYGYMKELEDFVNRM-------PFNPTVPMLRK 651
GY + + + F TVP + +
Sbjct: 779 KAVSQGYAPSVSHHLVSLCYFGLSNSFESTVPPMER 814
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 233/518 (44%), Gaps = 76/518 (14%)
Query: 23 SKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVE---ARKLESNLVTFYPTPPVFL 79
S+ TI G L +S Y LF SS A L SN++ + +
Sbjct: 258 SQGTVATIGGLLFLGFSLSSYFYPPLFLQSLSSSYSNNHKYAELLHSNVIKIGSFHNLGI 317
Query: 80 LNRAIECYGK-CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
N ++ Y K NL A LFDE+ RD +W ++ + Q LF M G
Sbjct: 318 TNHLLDLYAKNSQNLSHAHKLFDEILCRDVRTWTILISGFAQTRNFKMVSGLFRRMQKEG 377
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
V NQ T ++VL+ + E+ K +HG I+ G +++LE+S++D Y KC A+
Sbjct: 378 VCPNQFTLSSVLKCCSSICEIRNGKGIHGWILTSGIGFDIVLENSILDLYVKCGAFDYAK 437
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAG-----------------------------NGKEAV 229
+FD + K VSWN+++ YL G NG E +
Sbjct: 438 SLFDSMAEKGTVSWNIMIGGYLRMGDVESSLELFQSLYFKNIASWNTIIDGLMKNGFETI 497
Query: 230 V--MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ +KM+ + + TF+ AL S L + G QIHG I+++ + + SL +
Sbjct: 498 ALELLYKMVESGLGFNSVTFSVALNLVSCLVNLELGKQIHGRILRLIIHDNGFIRNSLLD 557
Query: 288 MYVKCGRLEDA-RGLLDQPDERN-------IISWTSIVSGYAISGRIREARELFNEMPER 339
MY KCG++E+A R + P E + I+SW+S++SGY +G A F M
Sbjct: 558 MYCKCGKMEEASRMFRNVPVEISCDDPLGEIVSWSSMISGYVRNGEYEYALRTFISMVHE 617
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
V+ +D+ TL +++ CA +++G+++H
Sbjct: 618 QVL-------------------------------VDKFTLTSVVSACANTGCLELGRQIH 646
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
I + + + + ++L+DMY KCG+L A++ F + + + V W +++ G A GQ
Sbjct: 647 AHILKIGHKVDAHLGSSLIDMYAKCGSLNDAQMIFKE-NDDPNVVLWTSMIFGCALHGQG 705
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
EA+ F M E P++ TF ++L AC + LE+G
Sbjct: 706 REAVRVFKCMMNEGITPNEITFISVLTACNHAGLLEEG 743
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 175/374 (46%), Gaps = 44/374 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++L + + + C+S I + + ++T + L N ++ Y KCG D A+
Sbjct: 380 PNQFTL-SSVLKCCSSICEIRNGKGIHGWILTSGIGFDIVLENSILDLYVKCGAFDYAKS 438
Query: 99 LFDEMPERDGGSWNAMLGAY-------------------------------TQNGFPGRT 127
LFD M E+ SWN M+G Y +NGF
Sbjct: 439 LFDSMAEKGTVSWNIMIGGYLRMGDVESSLELFQSLYFKNIASWNTIIDGLMKNGFETIA 498
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LEL M SG+ N +T++ L + + L + KQ+HG I++ N + +SL+D
Sbjct: 499 LELLYKMVESGLGFNSVTFSVALNLVSCLVNLELGKQIHGRILRLIIHDNGFIRNSLLDM 558
Query: 188 YGKCMVMTDARRMFDDIQNK--------NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
Y KC M +A RMF ++ + VSW+ ++ Y+ G + A+ F M+ E
Sbjct: 559 YCKCGKMEEASRMFRNVPVEISCDDPLGEIVSWSSMISGYVRNGEYEYALRTFISMVHEQ 618
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ FT + + AC+ G QIH I+KI + D + SL +MY KCG L DA+
Sbjct: 619 VLVDKFTLTSVVSACANTGCLELGRQIHAHILKIGHKVDAHLGSSLIDMYAKCGSLNDAQ 678
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELF----NEMPERNVISWNAMLAGYTRSL 355
+ + D+ N++ WTS++ G A+ G+ REA +F NE N I++ ++L +
Sbjct: 679 MIFKENDDPNVVLWTSMIFGCALHGQGREAVRVFKCMMNEGITPNEITFISVLTACNHAG 738
Query: 356 LWKEALDFVFLMRK 369
L +E + LM K
Sbjct: 739 LLEEGCKYFELMPK 752
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 253/489 (51%), Gaps = 35/489 (7%)
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVV 281
G EA+ ++ + IR F + L C+ G +H + F+ +V
Sbjct: 41 GRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L MY +CGR +AR + D+ RN+ SW +++GYA G + AR+LF+ M E++V
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV 160
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN ++ Y + + EA+ R+ + + +L +C L E+++ K+VHG
Sbjct: 161 VSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQ 220
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARI----------------------W------ 433
+ + SN+ +S++++D Y KCG +R AR W
Sbjct: 221 VLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSA 280
Query: 434 ---FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
F+QM ++ + VSW+A+++GYAR EA+ F++M ++ P ++TF + L ACA+
Sbjct: 281 SELFHQMPEK-NPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACAS 339
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNS 548
I++L+ GKQ+H ++IR + N + +L+++Y+KC LE + VF + DV++ N+
Sbjct: 340 IAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNT 399
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI N G +A+++F M + G+KPD ITF IL AC H G V+ L+FF +M +
Sbjct: 400 MISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDH 459
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
G+ P EHY C+I L R G EL + + M P + + CR + LG
Sbjct: 460 GVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKV 519
Query: 669 ARRLNELNP 677
A R+ EL P
Sbjct: 520 AERVIELKP 528
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 183/314 (58%), Gaps = 1/314 (0%)
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
++ Y K + +AR++FD + K+ VSWN IV Y G EA+ ++ R D+
Sbjct: 135 MLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFN 194
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
F+FA L C L Q+HG ++ F + V+ S+ + Y KCG + AR L D
Sbjct: 195 AFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFD 254
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ++I +WT+IVSGYA G + A ELF++MPE+N +SW+A+++GY R+ L EALD+
Sbjct: 255 EMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDY 314
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
M K + +Q T L CA ++ +K GK+VHG++ R + N V ++L+DMY K
Sbjct: 315 FTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSK 374
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG L ++ F+ M ++D V WN +++ A+ G E+AM F++M + +P + TF
Sbjct: 375 CGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIV 434
Query: 483 LLAACANISSLEQG 496
+L+AC++ +++G
Sbjct: 435 ILSACSHSGLVQEG 448
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 176/341 (51%), Gaps = 40/341 (11%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
VEARK+ + ++ N + Y K G++++AR LFD M E+D SWN ++ AY
Sbjct: 115 VEARKVFDKM----SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAY 170
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ G + L+ D + N ++A VL + EL ++KQ+HG ++ GF N+
Sbjct: 171 AKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNL 230
Query: 179 ILESSLVDAYGKCMVMTDARRMFDD-------------------------------IQNK 207
+L SS+VDAY KC M AR +FD+ + K
Sbjct: 231 VLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEK 290
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N VSW+ ++ Y G EA+ F KM++ I P +TF++ L AC+ +++ G Q+H
Sbjct: 291 NPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVH 350
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRI 326
G +I+ F + +V+ SL +MY KCG LE + + ++++++ W +++S A +G
Sbjct: 351 GYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHG 410
Query: 327 REARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDF 363
+A ++FN+M E + I++ +L+ + S L +E L F
Sbjct: 411 EKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 174/402 (43%), Gaps = 62/402 (15%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE-- 102
+A + LC K + A+++ ++ + L + ++ Y KCG + AR LFDE
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEML 257
Query: 103 -----------------------------MPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
MPE++ SW+A++ Y +N L+ F
Sbjct: 258 VKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTK 317
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G++ Q T+++ L + A L KQ+HG +++ F N I+ SSL+D Y KC +
Sbjct: 318 MMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGM 377
Query: 194 MTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ + +F + NK + V WN ++ G+G++A+ MF M+ ++P TF L
Sbjct: 378 LEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
Query: 253 ACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-- 303
ACS EG++ HGV D L ++ + G + L+
Sbjct: 438 ACSHSGLVQEGLRFFKAMTYDHGVF------PDQEHYACLIDLLGRAGCFVELVNELENM 491
Query: 304 --QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
+PD+R W++++ RI EL ++ ER VI + SL A
Sbjct: 492 SCKPDDR---VWSALLG----VCRIHNNIELGRKVAER-VIELKPQSSAAYVSL----AS 539
Query: 362 DFVFLMR-KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ FL + ++ + + ++ + G+S I +G + H FI
Sbjct: 540 LYAFLGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFI 581
>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 183/627 (29%), Positives = 299/627 (47%), Gaps = 58/627 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C S A+ RK+ ++ + L N I Y +CG++DDAR +F+ M +RD
Sbjct: 112 ILKACTSPMALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRD 171
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+WN M+G Q+G LFL M G + TY ++L ++A LG K++H
Sbjct: 172 IITWNVMIGRLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHS 231
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++ G +V + ++LV Y + + DAR +FD + +N ++WN ++ G G E
Sbjct: 232 HALRAGLESDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLE 291
Query: 228 AVVMFFKMLREDIRPLNFTFANALF-ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A +F +M RE + P T+ N L AC+ + ++H K+ + D V +L
Sbjct: 292 AFSLFRQMQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALV 351
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY KCG ++DA R +F M +R+V+SW
Sbjct: 352 HMYAKCGSMDDA-------------------------------RRVFYGMVDRDVVSWTV 380
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
M+ G + +EA M++ + T ILN A ++ KEVH +
Sbjct: 381 MIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAE 440
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
S++ V NAL+ MY KCG++ +AR+ F +M + RD +SWNA++ G A+ G EA + F
Sbjct: 441 LDSHLRVGNALIHMYAKCGSIENARLVFDRM-EDRDIISWNAMIGGLAQNGHGREAFSHF 499
Query: 467 SEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
EMQ E P T ++L ACA+ +L++ K++H + E ++ ALV Y KC
Sbjct: 500 LEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAKC 559
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
++ A VF+ +S D+I N MI G + R EA +F M+ G PD IT+ IL
Sbjct: 560 GRIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLSIL 619
Query: 586 LACIHEGNVKL-ALQFF-----DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
GNV + AL++ ++R + P++ ++ +Y + G + +
Sbjct: 620 -----GGNVSIEALEWVKEVHRHAVRAGFDTDPRVS--SALVHMYTKCGDIDNA-----K 667
Query: 640 MPFNPT-VPMLR-----KIFDKCRKNG 660
+ F P +P L + D CR +G
Sbjct: 668 LHFTPNMLPDLDGTAWGDLLDACRNHG 694
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 273/549 (49%), Gaps = 33/549 (6%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
SY+ Y + Q K +V A+++ ++ ++ N+ + Y +CG L + R +F
Sbjct: 5 SYT-YVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVF 63
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D + E++ +W M+G Y +N +E++ M +GV N+IT+ N+L++ + L
Sbjct: 64 DTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALK 123
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+++H I GF ++ L ++L+ Y +C M DAR +F+ + +++ ++WNV++ R +
Sbjct: 124 WGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLV 183
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G G EA +F +M RE P T+ + L A + + ++H ++ E D
Sbjct: 184 QHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVR 243
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L MY + G ++DAR + D+ ERNII+W S++ G A G EA LF +M
Sbjct: 244 VGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQ--- 300
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
R L +A+ +V ++ N CA ++ ++VH
Sbjct: 301 ------------REGLVPDAITYVNILN---------------NACASTGALQWVRKVHD 333
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ ++ V NAL+ MY KCG++ AR FY M RD VSW ++ G A+ G
Sbjct: 334 DAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVD-RDVVSWTVMIGGLAQHGFGR 392
Query: 461 EAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA + F +MQ E P+ T+ ++L A+ +LE K++H + + ++ AL+
Sbjct: 393 EAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAELDSHLRVGNALI 452
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y KC +E A VF D+I N+MI G N GREA F M++EG PD
Sbjct: 453 HMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAA 512
Query: 580 TFHGILLAC 588
T IL AC
Sbjct: 513 TLVSILNAC 521
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 241/508 (47%), Gaps = 43/508 (8%)
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+S + TY ++L+ + +L ++KQ+H I+K + + + L+ Y +C + + R
Sbjct: 1 ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+FD + KN +W +++ Y + ++A+ ++ KM + ++P TF N L AC+
Sbjct: 61 EVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPM 120
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ G +IH I F+ D + +L MY +CG ++DAR + + +R+II+W ++
Sbjct: 121 ALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIG 180
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GR EA LF +M + D T
Sbjct: 181 RLVQHGRGHEAFSLFLQMQREGFVP-------------------------------DTTT 209
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+LN A + KEVH R S++ V AL+ MY + G+++ AR+ F +M+
Sbjct: 210 YLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARSGSIKDARLVFDKMT 269
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLL-AACANISSLEQG 496
+ R+ ++WN+++ G A+ G EA + F +MQ E P T+ +L ACA+ +L+
Sbjct: 270 E-RNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNILNNACASTGALQWV 328
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+++H + + +V ALV +Y KC ++ A RVF DV+ MI G +
Sbjct: 329 RKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTVMIGGLAQH 388
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
GREA +F M++EG P+ T+ IL G AL++ + + + +L+
Sbjct: 389 GFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTG----ALEWVKEVHT-HAVNAELDS 443
Query: 617 Y----ECMIKLYCRYGYMKELEDFVNRM 640
+ +I +Y + G ++ +RM
Sbjct: 444 HLRVGNALIHMYAKCGSIENARLVFDRM 471
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 191/415 (46%), Gaps = 32/415 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS+ A+ RK+ + V + N + Y KCG++DDAR +F M +RD SW
Sbjct: 319 CASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSW 378
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
M+G Q+GF LFL M G N TY ++L A L K++H V
Sbjct: 379 TVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVN 438
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
++ + ++L+ Y KC + +AR +FD +++++ +SWN ++ G+G+EA
Sbjct: 439 AELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSH 498
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F +M RE P T + L AC+ + ++H ++ E D V +L Y K
Sbjct: 499 FLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAK 558
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CGR++DAR + + R+II+W ++ G A GR EA LF +M + +
Sbjct: 559 CGRIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVP-------- 610
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
D +T IL + ++ KEVH R + ++
Sbjct: 611 -----------------------DAITYLSILGGNVSIEALEWVKEVHRHAVRAGFDTDP 647
Query: 412 FVSNALLDMYRKCGNLRSARIWFY-QMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
VS+AL+ MY KCG++ +A++ F M D +W +L G E A+ +
Sbjct: 648 RVSSALVHMYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLDACRNHGDVEMAVPT 702
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/564 (29%), Positives = 280/564 (49%), Gaps = 55/564 (9%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVK----------RGFCGNVILE-SSLVDAYGK 190
N ++ +L S E +L + LH +VK R + +V++ +SLV Y +
Sbjct: 10 NYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYAR 69
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFAN 249
C DA R+FD+++ ++AVSWN ++ AG+ A+ +F +MLR D R + TF
Sbjct: 70 CGRREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTT 126
Query: 250 ALFACS---FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
L C+ S P M +HG+++ FE + V +L Y +CG P
Sbjct: 127 VLSECARAGAASLPACAM-VHGLVVSCGFEAEVPVGNALVTAYFECG----------SP- 174
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
A +F+ M E+NVI+W AM++G R+ L+KE+
Sbjct: 175 --------------------ASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQ 214
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M +T D + T L CA + G++VHG + + + ++ V + L+D+Y KCG
Sbjct: 215 MIRTV-DANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGL 273
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLA 485
+ A + ++ + D+V +L G+A+ G E+A F+EM + T +L
Sbjct: 274 MEDA-LTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLG 332
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINV-VCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
A + GKQIH VI+ C+ +N VC G LV +Y+KC L ++RVF E S + +
Sbjct: 333 AFGASAPFALGKQIHALVIKRCFGVNTYVCNG-LVNMYSKCGELRESVRVFDEMPSKNSV 391
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
NS+I F + G E ++F MK +G KP +TF +L AC H G+ K L+ +SM
Sbjct: 392 SWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSM 451
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
+YG++P++EHY C++ + R G + + + F+ PF + + + C +G + +
Sbjct: 452 SSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEV 511
Query: 665 GEWAARRLNELNPWAPFQFKITTN 688
G++AA +L L+P + + +N
Sbjct: 512 GKYAAEKLLLLDPSCTAAYVLLSN 535
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 207/423 (48%), Gaps = 40/423 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y +CG +DA +FDEM RD SWN+++ A G L LF M S
Sbjct: 61 NSLVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRG---AGDALALFRRMLRSDAR 117
Query: 141 A-NQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
A ++ T+ VL + A L +HGL+V GF V + ++LV AY +C A
Sbjct: 118 ACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASA 177
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R+F + KN ++W ++ A KE+ +F +M+R + N T++ AL AC+
Sbjct: 178 ERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARS 236
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ EG Q+HG+++K FE D V L ++Y KCG +EDA + E + + T I+
Sbjct: 237 LAAREGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVIL 296
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G+A +G +A ELF EM +ID+
Sbjct: 297 VGFAQNGLEEKAFELFAEMV-------------------------------GAGNEIDEN 325
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ +L + +GK++H + + + N +V N L++MY KCG LR + F +M
Sbjct: 326 TVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEM 385
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
++ VSWN+++ +AR G E F M+ + +P+ TF +LL AC+++ S ++G
Sbjct: 386 PS-KNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKG 444
Query: 497 KQI 499
+I
Sbjct: 445 LEI 447
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 191/412 (46%), Gaps = 43/412 (10%)
Query: 25 TLTKTISGHLKSD-EPVSYSLYAHLFQL--------------CASSKAIVEARKLESNLV 69
T T ISG +++ S+SL+ + + CA S A E +++ +V
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCALLACARSLAAREGQQVHGLVV 250
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
+ + + ++ Y KCG ++DA +F E D +L + QNG + E
Sbjct: 251 KAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFE 310
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
LF +M +G ++ T + VL + + KQ+H L++KR F N + + LV+ Y
Sbjct: 311 LFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYS 370
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + ++ R+FD++ +KN+VSWN I+ + G+G E +F M + +P + TF +
Sbjct: 371 KCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLS 430
Query: 250 ALFACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
L ACS + S +G++I +GV+ +++ + +M + G L+DA+ +
Sbjct: 431 LLHACSHVGSAKKGLEILNSMSSQYGVLPRMEH------YACVVDMLGRAGLLDDAKSFI 484
Query: 303 -DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWK 358
D P N + W +++ + G + A E + ++ + Y+ W
Sbjct: 485 EDGPFTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWD 544
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
D +M++ ++ +GL + G S I++ KEVH F+ R+ N
Sbjct: 545 ---DRAKVMKRMSE------MGLRKDT--GKSWIELEKEVHSFVVRSTSHPN 585
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 269/528 (50%), Gaps = 37/528 (7%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH +K G ++I+ + +++ Y KC + ARRMFD++ ++N VSW+ I+ Y G
Sbjct: 25 LHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQ 84
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
A+ +F +M I P + FA+ + AC+ L++ +G+Q+H +K+ V +
Sbjct: 85 PLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNA 141
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+KCG DA LL + N M E N +S+
Sbjct: 142 LISMYMKCGLCTDA--LL-----------------------------VHNVMSEPNAVSY 170
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA++AG+ + ++ ++ +MR+ D+ T +L +C + G ++H + +
Sbjct: 171 NALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIK 230
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + F+ N ++ MY K + A F + + +D +SWN ++T E A+
Sbjct: 231 LNLEDSAFIGNVIITMYSKFNLIEEAEKVF-GLIKEKDLISWNTLVTACCFCKDHERALR 289
Query: 465 SFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F +M +P FTF +LAACA ++S+ GKQIH +IR +V ALV +Y
Sbjct: 290 VFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMY 349
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC ++ + VF+ +S +++ N++I F ++ G ALE F MK GI PD +TF
Sbjct: 350 AKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFV 409
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V+ +F+SM YGI P +EH+ C+I L R G ++E E+++ ++PF
Sbjct: 410 GLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPF 469
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+L + CR +G +GE A +L +L P + + +N +
Sbjct: 470 GHDPIILGSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLY 517
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 212/451 (47%), Gaps = 35/451 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L CA KA + L + + + + N I Y KCGN+ AR +FDEM +R+
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW+A++ Y Q G P L LF M + N+ +A+V+ + A L Q+H
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHA 125
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
+K G + ++L+ Y KC + TDA + + + NAVS+N ++ ++ ++
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ F M ++ P FTF+ L C+ + GMQ+H +IK++ E + +
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY K +E+A + E+++ISW ++V+ A +F +M
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDM----------- 294
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
LD F+ D T +L CAGL+ I+ GK++HG + R
Sbjct: 295 -------------LDVCFVKP------DDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQ 335
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++ VSNAL++MY KCG+++++ F + S R+ VSWN ++ + G A+ F
Sbjct: 336 YQDVGVSNALVNMYAKCGSIKNSYDVFRRTSD-RNLVSWNTIIAAFGNHGLGARALEHFE 394
Query: 468 EMQW-ETRPSKFTFETLLAACANISSLEQGK 497
+M+ P TF LL AC + +E+G+
Sbjct: 395 KMKTVGIHPDSVTFVGLLTACNHAGLVEEGQ 425
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 149/299 (49%), Gaps = 11/299 (3%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
++A + CAS A+ + ++ + + F+ N I Y KCG DA + + M
Sbjct: 103 VFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVM 162
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
E + S+NA++ + +N P + +E F M G + ++ T++ +L +
Sbjct: 163 SEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGM 222
Query: 164 QLHGLIVK-----RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
QLH ++K F GNVI + Y K ++ +A ++F I+ K+ +SWN +V
Sbjct: 223 QLHCQMIKLNLEDSAFIGNVI-----ITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTA 277
Query: 219 YLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ + A+ +F ML ++P +FTFA L AC+ L+S G QIHG +I+
Sbjct: 278 CCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQ 337
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V +L MY KCG ++++ + + +RN++SW +I++ + G A E F +M
Sbjct: 338 DVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKM 396
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 124/212 (58%), Gaps = 5/212 (2%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+G +L+ CA + G +H + S+I VSN ++++Y KCGN+ AR F +M
Sbjct: 5 AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGK 497
S R+ VSW+A+++GY + GQ A+ FS+M+ P+++ F ++++ACA++++L QG
Sbjct: 65 SD-RNLVSWSAIISGYDQTGQPLLALNLFSQMR--IVPNEYVFASVISACASLTALSQGL 121
Query: 498 QIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
Q+H ++ C ++ V AL+ +Y KC A+ V S + + N++I GF N
Sbjct: 122 QVHAQSLKLGCVSVSFV-SNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVEN 180
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
++ + +E F +M+++G PD TF G+L C
Sbjct: 181 QQPEKGIEAFKVMRQKGFAPDRFTFSGLLGIC 212
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + CA +I +++ +L+ V + N + Y KCG++ ++ +F
Sbjct: 307 FAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTS 366
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+R+ SWN ++ A+ +G R LE F M G+ + +T+ +L +
Sbjct: 367 DRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTA 414
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 256/496 (51%), Gaps = 23/496 (4%)
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+++ SW +R + + +EA+ + +M RP NF F L A S L G Q
Sbjct: 54 SRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113
Query: 266 IHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
IH +K + V V +L MY KCG + D + ++++ YA G
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD-----------KTFTNNALMAMYAKLG 162
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R+ +++ LF +R+++SWN M++ +++S + EAL F LM ++D VT+ +L
Sbjct: 163 RVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLP 222
Query: 385 VCAGLSEIKMGKEVHGFIHR-NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C+ L + +GKE+H ++ R ND N FV +AL+DMY C + S R F + RR +
Sbjct: 223 ACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE 282
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACAN-ISSLEQGKQIH 500
+ WNA+++GYAR G E+A+ F EM P+ T +++ AC + ++++ +GK+IH
Sbjct: 283 L-WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIH 341
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ IRN ++ ALV++Y KC CL + RVF E + +VI N +I+ + +G
Sbjct: 342 AYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGE 401
Query: 561 EALEVFGLMKKEG-----IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
EALE+F M E KP+ +TF + AC H G + L F M+ +G+ P +
Sbjct: 402 EALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSD 461
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFN-PTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
HY C++ L R G ++E + VN MP V + CR + LGE AA+ L
Sbjct: 462 HYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH 521
Query: 675 LNPWAPFQFKITTNRF 690
L P + + +N +
Sbjct: 522 LEPNVASHYVLLSNIY 537
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 60/422 (14%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P R SW L + T++ + +++M SG + + VL++ + +L +
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 164 QLHGLIVKRGF-CGNVILESSLVDAYGKC-------------MVM-------TDARRMFD 202
Q+H VK G+ +V + ++LV+ YGKC M M D++ +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+++ VSWN ++ + + EA+ F M+ E + T A+ L ACS L
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 263 GMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +IH +++ D + V +L +MY C ++E R + D R I W +++SGYA
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G +A LF EM + L+ TT T+
Sbjct: 293 RNGLDEKALILFIEM------------------------IKVAGLLPNTT------TMAS 322
Query: 382 ILNVCA-GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
++ C L+ I GKE+H + RN +S+I V +AL+DMY KCG L +R F +M
Sbjct: 323 VMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN- 381
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWETRPSKFTFETLLAACANISSLE 494
++ ++WN ++ G+ EEA+ F M E +P++ TF T+ AAC++ +
Sbjct: 382 KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLIS 441
Query: 495 QG 496
+G
Sbjct: 442 EG 443
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 151/304 (49%), Gaps = 12/304 (3%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
F N + Y K G +DD++ LF+ +RD SWN M+ +++Q+ L F M
Sbjct: 148 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 207
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMT 195
GV + +T A+VL + + L V K++H +++ N + S+LVD Y C +
Sbjct: 208 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 267
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFAC 254
RR+FD I + WN ++ Y G ++A+++F +M++ + P T A+ + AC
Sbjct: 268 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 327
Query: 255 SF-LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
L++ +G +IH I+ D V +L +MY KCG L +R + ++ +N+I+W
Sbjct: 328 VHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITW 387
Query: 314 TSIVSGYAISGRIREARELFNEM---------PERNVISWNAMLAGYTRSLLWKEALDFV 364
++ + G+ EA ELF M + N +++ + A + S L E L+
Sbjct: 388 NVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF 447
Query: 365 FLMR 368
+ M+
Sbjct: 448 YRMK 451
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 165/346 (47%), Gaps = 40/346 (11%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NH 136
F+ + ++ Y C ++ R +FD + R WNAM+ Y +NG + L LF++M
Sbjct: 251 FVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKV 310
Query: 137 SGVSANQITYANVLRSSAEELE-LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+G+ N T A+V+ + L + K++H ++ ++ + S+LVD Y KC +
Sbjct: 311 AGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLN 370
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-----DIRPLNFTFANA 250
+RR+F+++ NKN ++WNV++ + G G+EA+ +F M+ E + +P TF
Sbjct: 371 LSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITV 430
Query: 251 LFACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
ACS EG+ + HGV D + ++ + G+LE+A L++
Sbjct: 431 FAACSHSGLISEGLNLFYRMKHDHGVEPTSDH------YACVVDLLGRAGQLEEAYELVN 484
Query: 304 Q-PDERNII-SWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLL 356
P E + + +W+S++ I + A+ L + P NV S +L+ Y+ + L
Sbjct: 485 TMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP--NVASHYVLLSNIYSSAGL 542
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W +A++ MR+ + G S I+ EVH F+
Sbjct: 543 WNKAMEVRKNMRQMGVKKE-----------PGCSWIEFRDEVHKFM 577
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 23/328 (7%)
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P R+ SW L TRS ++EA+ M + D +L +GL ++K G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 397 EVHGFIHRNDY-SSNIFVSNALLDMYRKCGNL------RSARIWFYQMSQR--------- 440
++H + Y SS++ V+N L++MY KCG + +A + Y R
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 441 ----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
RD VSWN +++ +++ + EA+ F M E T ++L AC+++ L+
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 496 GKQIHCFVIRNCYEI-NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+IH +V+RN I N ALV++Y C +E RVF + + N+MI G+
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 555 HNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N +AL +F ++K G+ P+ T ++ AC+H + + + +
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ ++ +Y + G + N MP
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMP 380
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 46 AHLFQLCASS-KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
A + C S AI + +++ + + + + + ++ Y KCG L+ +R +F+EMP
Sbjct: 321 ASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP 380
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
++ +WN ++ A +G LELF +M
Sbjct: 381 NKNVITWNVLIMACGMHGKGEEALELFKNM 410
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 268/518 (51%), Gaps = 41/518 (7%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G+L A+ +FD++P+ + +N+++ Y+ + P + LF M SG+S N+ T VL
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ + + +HGL +K G V ++++L+ Y C ++ AR++FDDI +K V
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 155
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SWN ++ Y GN KEA ++F KM + P FTF N L CS G +H I
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCI 215
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+ D +V +L +MY KCG L A+ + D+ E+N++SWTS++S YA G I AR
Sbjct: 216 EITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVAR 275
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
++F++MP +NV+SWN+M++ Y R ++EALD MR + D+ TL IL C+ L
Sbjct: 276 QIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLG 335
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ MGK++H +I N + + + N+L+DMY KCG + +A F +M ++ VSWN ++
Sbjct: 336 DLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPG-KNLVSWNVII 394
Query: 451 TGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
A G EA+ F EMQ + T P + T LL+AC++ ++ G
Sbjct: 395 GALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG------------- 441
Query: 510 INVVCRGALVEVYTKCCCLEYAIR---VFKESSSLDVIICNSMILGFCHNERGREALEVF 566
L Y R +++ ++ C M+ EA+E+
Sbjct: 442 ------------------LYYFDRMGVIYRVPREIEHYAC--MVDLLGRGGLLGEAIELI 481
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
G M +KPD + + +L AC GNV++ Q +
Sbjct: 482 GRMP---MKPDVVVWGALLGACRIHGNVEIGKQILKQL 516
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 271/561 (48%), Gaps = 64/561 (11%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD--AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
K LH I+ G + L+ A + A+RMFD I N +N ++R Y
Sbjct: 5 KLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYS 64
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+ + +AV++F +M+ + P FT L AC S+ +E + +HG+ IK+
Sbjct: 65 NSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLG------ 118
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+GSL + ++++ Y + G I AR+LF+++ ++
Sbjct: 119 -IGSL------------------------VFVQNALIAVYVVCGLIHCARKLFDDITDKT 153
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
++SWN+M+ GY WKEA MR+ + D T +L+VC+ ++ +G+ VH
Sbjct: 154 LVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHF 213
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-------------------- 440
I +I V NAL+DMY KCGNL SA+ F + ++
Sbjct: 214 CIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEV 273
Query: 441 ----------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN 489
++ VSWN++++ Y R GQ EA+ F++M+ P + T ++LAAC+
Sbjct: 274 ARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQ 333
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ L GK+IH +++ N V +L+++Y KC + A+ +F E +++ N +
Sbjct: 334 LGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVI 393
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I + G EA+++F M+ +G PD IT G+L AC H G V + L +FD M Y
Sbjct: 394 IGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYR 453
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
+ ++EHY CM+ L R G + E + + RMP P V + + CR +G +G+
Sbjct: 454 VPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQIL 513
Query: 670 RRLNELNPWAPFQFKITTNRF 690
++L EL P + + + +N +
Sbjct: 514 KQLLELEPHSGGLYVLISNIY 534
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 161/379 (42%), Gaps = 48/379 (12%)
Query: 20 PTPSKTLTKT-ISGHLKSDEPVSYSLY----------------AHLFQLCASSKAIVEAR 62
P P+K + + I G+ SD+P+ L + + C A EA
Sbjct: 49 PQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAV 108
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+ + VF+ N I Y CG + AR LFD++ ++ SWN+M+G Y G
Sbjct: 109 LVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMG 168
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
LF M G+ + T+ N+L ++ +L + + +H I G ++I+ +
Sbjct: 169 NWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRN 228
Query: 183 SLVDAYGKC-----------------------MV--------MTDARRMFDDIQNKNAVS 211
+LVD Y KC M+ + AR++FD + KN VS
Sbjct: 229 ALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVS 288
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ YL G +EA+ +F KM + P T + L ACS L G +IH I+
Sbjct: 289 WNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYIL 348
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ SL +MY KCG + A + + +N++SW I+ A+ G EA +
Sbjct: 349 SNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIK 408
Query: 332 LFNEMPERNVISWNAMLAG 350
LF EM + L G
Sbjct: 409 LFEEMQADGTLPDEITLTG 427
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 16/289 (5%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
S++AI + R E N+V++ I Y + G+++ AR +FD+MP ++ SWN+
Sbjct: 242 SAQAIFD-RTQEKNVVSW---------TSMISAYAQHGSIEVARQIFDQMPGKNVVSWNS 291
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ Y + G L+LF M +S V ++ T ++L + ++ +L + K++H I+
Sbjct: 292 MISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNK 351
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
V L +SL+D Y KC + A +F ++ KN VSWNVI+ + G G EA+ +F
Sbjct: 352 GAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFE 411
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIH---GVIIKIDFEGDDVVLGSLTEMYV 290
+M + P T L ACS G+ GVI ++ E + + ++
Sbjct: 412 EMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEH--YACMVDLLG 469
Query: 291 KCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ G L +A L+ + P + +++ W +++ I G + +++ ++ E
Sbjct: 470 RGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLE 518
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/635 (28%), Positives = 306/635 (48%), Gaps = 38/635 (5%)
Query: 49 FQLCASSKAIVEARKLE----SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
F SS ++E + L +++ + V + N I + ++++A +FD M
Sbjct: 950 FATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN 1009
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E D SWNAM+ AY +G +L F M H N T +++L + L +
Sbjct: 1010 ECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRG 1069
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HGL+VK G NV + ++L+ Y + DA +F + ++ +SWN ++ Y+ G
Sbjct: 1070 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 1129
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ + + ++L+ + TFA+AL ACS E +H +II F +V +
Sbjct: 1130 CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 1189
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY G+L G + EA+++ MP+ + ++W
Sbjct: 1190 LVTMY---GKL----------------------------GMMMEAKKVLQTMPQPDRVTW 1218
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI-KMGKEVHGFIH 403
NA++ G+ + EA+ L+R+ + +T+ +L C+ ++ K G +H I
Sbjct: 1219 NALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIV 1278
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S+ +V N+L+ MY KCG+L S+ F + + ++WNA++ A G EEA+
Sbjct: 1279 LTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK-SPITWNAMVAANAHHGCGEEAL 1337
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM+ +F+F LAA AN++ LE+G+Q+H VI+ +E ++ A +++Y
Sbjct: 1338 KIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMY 1397
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC + +++ + + + N +I F + ++A E F M K G KPDH+TF
Sbjct: 1398 GKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFV 1457
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V L ++DSM ++G+ P +EH C+I L R G + E F+ MP
Sbjct: 1458 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 1517
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P R + CR +G L A L EL+P
Sbjct: 1518 PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDP 1552
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 236/462 (51%), Gaps = 36/462 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
SLY + QLC KA + + ++L+T + L + I Y K G++ AR +FD
Sbjct: 31 SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG 90
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MPER SW AM+ Y+QNG + LF DM H GV ANQ TY + LR+ L +
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMG 150
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q+ G I K F N+ ++S+LVD + KC M DA +F + ++ VSWN ++ Y V
Sbjct: 151 IQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQ 210
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G ++ MF MLR + P +T + L A + QIHG+I ++ + D+V
Sbjct: 211 GFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT 270
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR-EARELFNEMPERNV 341
G L Y K G L A+ L ++++ S T++++GYA G +A +LF EM + N+
Sbjct: 271 GLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNI 330
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+D V L +LN+CA L+ +G ++H F
Sbjct: 331 -------------------------------GMDDVILCSMLNICANLASFALGTQIHAF 359
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ S ++ + NAL+DMY K G + A+ F +M + ++ +SW ++++GYA+ G
Sbjct: 360 ALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEM-EEKNVISWTSLISGYAKHGYGHM 418
Query: 462 AMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF 502
A++ + +M+ + +P+ TF +LL AC++ +G + CF
Sbjct: 419 AVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCE--CF 458
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 247/515 (47%), Gaps = 34/515 (6%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H ++ GF ++ L + L+ Y K + AR +FD + ++ VSW +V Y G
Sbjct: 52 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 111
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++A V+F M ++ FT+ +AL AC+ L G+Q+ G I K F + V +
Sbjct: 112 FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSA 171
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L + + KCG++EDA L ER+++SW +++ GYA+ G ++ +F M ++
Sbjct: 172 LVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP- 230
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
D TLG +L A + + ++HG I +
Sbjct: 231 ------------------------------DCYTLGSVLRASAEGGGLIIANQIHGIITQ 260
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG-QSEEAM 463
Y S V+ L++ Y K G+LRSA+ M ++D S A++TGYA G S +A+
Sbjct: 261 LGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM-LKKDLFSSTALITGYAHEGIYSVDAL 319
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM Q ++L CAN++S G QIH F ++ +V AL+++Y
Sbjct: 320 DLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMY 379
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
K +E A R F E +VI S+I G+ + G A+ ++ M+ +G KP+ +TF
Sbjct: 380 AKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFL 439
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G + F++M KY I P+ EHY CM+ L+ R G ++E + + ++
Sbjct: 440 SLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDI 499
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ I GY +LG+ AA L + P
Sbjct: 500 KHNASLWGAILGASSIYGYMSLGKEAASNLFNMQP 534
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 254/514 (49%), Gaps = 34/514 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F N I Y K GN++ AR +FDEM R+ SW+ ML Y + G + LF M
Sbjct: 779 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 838
Query: 137 SGVSANQITYANVLRSSAEELELGVSK-QLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
GV N A+++ + + + Q+HG +VK G G+V + ++LV YG ++
Sbjct: 839 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 898
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+A+++F+++ + N VSW ++ Y +GN E + ++ +M +E + TFA +C
Sbjct: 899 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 958
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G Q+ G II+ FE V SL M+ +E+A + D +E +IISW +
Sbjct: 959 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 1018
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S YA G RE+ F+ W MR + +
Sbjct: 1019 MISAYAHHGLCRESLRCFH---------W----------------------MRHLHNETN 1047
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL +L+VC+ + +K G+ +HG + + SN+ + N LL +Y + G A + F
Sbjct: 1048 STTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 1107
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLE 494
M++ RD +SWN+++ Y + G+ + + +E +Q + TF + LAAC+N L
Sbjct: 1108 AMTE-RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 1166
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+ K +H +I + ++ ALV +Y K + A +V + D + N++I G
Sbjct: 1167 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 1226
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
NE EA++ + L++++GI ++IT +L AC
Sbjct: 1227 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 1260
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 207/411 (50%), Gaps = 11/411 (2%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K ++ L+ + +++ +A C++ + ++E++ + + ++ + + N + Y
Sbjct: 1135 KILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMY 1194
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
GK G + +A+ + MP+ D +WNA++G + +N P ++ + + G+ AN IT
Sbjct: 1195 GKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMV 1254
Query: 148 NVLRS-SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+VL + SA + L +H IV GF + +++SL+ Y KC + + +FD + N
Sbjct: 1255 SVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGN 1314
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ ++WN +V G G+EA+ +F +M + F+F+ L A + L+ EG Q+
Sbjct: 1315 KSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQL 1374
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG++IK+ FE D V + +MY KCG + D +L QP R+ +SW ++S +A G
Sbjct: 1375 HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCF 1434
Query: 327 REARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
++ARE F+EM P+ + +++ ++L+ L E L + M + V G+
Sbjct: 1435 QKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFG----VFPGIE 1490
Query: 383 LNVCAGLSEIKMGKEVH--GFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
VC + G+ H GFI N +LL R GNL AR
Sbjct: 1491 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELAR 1541
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 237/522 (45%), Gaps = 40/522 (7%)
Query: 125 GRTLELFLDMNHSGVSANQITYANV-LRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
G ++FL H+ + N L+ +E K LH + + ++
Sbjct: 725 GDIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNT 784
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L++ Y K + AR +FD+++++N SW+ ++ Y+ G +EAV +F +M + P
Sbjct: 785 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPN 844
Query: 244 NFTFANALFACSFLSSPY---EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
F A+ + ACS S Y EG Q+HG ++K GD V +L Y G + +A+
Sbjct: 845 GFMVASLITACS--RSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 902
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
L ++ + N++SWTS++ GY+ SG E ++ M + V
Sbjct: 903 LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG----------------- 945
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+Q T + + C L + +G +V G I + + ++ V+N+L+ M
Sbjct: 946 --------------NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 991
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFT 479
+ ++ A F M++ D +SWNA+++ YA G E++ F M + T
Sbjct: 992 FSSFSSVEEACYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+LL+ C+++ +L+ G+ IH V++ + NV L+ +Y++ E A VF+ +
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D+I NSM+ + + + + L++ + + G +H+TF L AC + + +
Sbjct: 1111 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNP-ECLIESK 1169
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ G L ++ +Y + G M E + + MP
Sbjct: 1170 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP 1211
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 155/666 (23%), Positives = 274/666 (41%), Gaps = 86/666 (12%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +CA+ + ++ + + + P+ V + N I+ Y K G ++DA+ FDEM E++
Sbjct: 340 MLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKN 399
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS------SAEELEL-- 159
SW +++ Y ++G+ + L+ M G N +T+ ++L + +AE E
Sbjct: 400 VISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFN 459
Query: 160 -------------------------GVSKQLHGLIVKRGFCGNVILESSLVDA---YGKC 191
G+ ++ + L+ K N L +++ A YG
Sbjct: 460 NMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYM 519
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG----------------NGKEAVVMFFKM 235
+ +A ++Q +N+V++ V+ Y AG K A FF+
Sbjct: 520 SLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQA 579
Query: 236 LREDIRPLNFTFA------NAL-FACSFLS--SPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
++ I L N L F FLS +P E +++ F V S
Sbjct: 580 TKKSIPLLQVQHGVSRRDFNILDFGAIFLSNRTPQEECFPDTFVLEPSFLPPSAVWKSSD 639
Query: 287 E--------MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ V + A G+ + + S T +A I A L NE P
Sbjct: 640 HRSVQLNGNLTVSVDEVGSALGMRQVEKPKTVGSHTG-QKQWAPVSTITTASALINETPV 698
Query: 339 RNVI------SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
N AG R + VFL ++ T D L + G SEI
Sbjct: 699 ENFAEQVKDDDLKTSNAGSRRWGCLDGDIAKVFLQQQHT-DYGIRCLNAVNFPLKGFSEI 757
Query: 393 K---MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
GK +H F + IF +N L++MY K GN+ AR F +M + R++ SW+ +
Sbjct: 758 TSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEM-RHRNEASWSTM 816
Query: 450 LTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSL-EQGKQIHCFVIRN 506
L+GY R G EEA+ F +M W P+ F +L+ AC+ + ++G Q+H FV++
Sbjct: 817 LSGYVRVGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT 875
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+V ALV Y + A ++F+E +V+ S+++G+ + E L V+
Sbjct: 876 GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVY 935
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M++EG+ + TF + +C + L Q + +YG + +I ++
Sbjct: 936 QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI-IQYGFEDSVSVANSLISMFSS 994
Query: 627 YGYMKE 632
+ ++E
Sbjct: 995 FSSVEE 1000
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 147/299 (49%), Gaps = 10/299 (3%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVSAN 142
I Y K G+L A+ L M ++D S A++ Y G + L+LF +MN + +
Sbjct: 274 INAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMD 333
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ ++L A + Q+H +K +V + ++L+D Y K + DA+R FD
Sbjct: 334 DVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFD 393
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+++ KN +SW ++ Y G G AV ++ KM + +P + TF + LFACS E
Sbjct: 394 EMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAE 453
Query: 263 GMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGY 320
G + + ++ K + + + +++ + G LE+A LL + D + N W +I+
Sbjct: 454 GCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGAS 513
Query: 321 AISGRIREARE----LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM--RKTTKD 373
+I G + +E LFN PE N +++ + + Y+ + LW +A LM R T K+
Sbjct: 514 SIYGYMSLGKEAASNLFNMQPE-NSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKN 571
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 15/266 (5%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
IL +C K G +H + N + S++ ++ L+ Y K G++ +AR F M +R
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPER- 94
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIH 500
VSW A+++GY++ G+ E+A FS+M+ + ++FT+ + L AC ++ L+ G Q+
Sbjct: 95 SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ 154
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ + + N+ + ALV+ ++KC +E A +F DV+ N+MI G+
Sbjct: 155 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 214
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH--YE 618
++ +F M + G+ PD T +L A G + +A Q +GII QL + Y+
Sbjct: 215 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQI-------HGIITQLGYGSYD 267
Query: 619 C----MIKLYCRYGYMKELEDFVNRM 640
+I Y + G ++ +D M
Sbjct: 268 IVTGLLINAYAKNGSLRSAKDLRKGM 293
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
G+ EA+ S PS + +L C + + +QG IH +I N + ++
Sbjct: 12 GRLAEALKLLSSNPTRLDPSLYL--KILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+ Y K + A VF V+ +M+ G+ N R +A +F M+ G+K
Sbjct: 70 KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA 129
Query: 577 DHITFHGILLAC 588
+ T+ L AC
Sbjct: 130 NQFTYGSALRAC 141
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/603 (28%), Positives = 294/603 (48%), Gaps = 34/603 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I + ++++A +FD M E D SWNAM+ AY +G +L F M H
Sbjct: 332 VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 391
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
N T +++L + L + +HGL+VK G NV + ++L+ Y + D
Sbjct: 392 LHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSED 451
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + ++ +SWN ++ Y+ G + + + ++L+ + TFA+AL ACS
Sbjct: 452 AELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSN 511
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
E +H +II F +V +L MY G+L
Sbjct: 512 PECLIESKIVHALIIVAGFHDFLIVGNALVTMY---GKL--------------------- 547
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
G + EA+++ MP+ + ++WNA++ G+ + EA+ L+R+ +
Sbjct: 548 -------GMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 600
Query: 377 VTLGLILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T+ +L C+ ++ K G +H I + S+ +V N+L+ MY KCG+L S+ F
Sbjct: 601 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 660
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLE 494
+ + ++WNA++ A G EEA+ F EM+ +F+F LAA AN++ LE
Sbjct: 661 GLGNK-SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLE 719
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G+Q+H VI+ +E ++ A +++Y KC + +++ + + + N +I F
Sbjct: 720 EGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFA 779
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ ++A E F M K G KPDH+TF +L AC H G V L ++DSM ++G+ P +
Sbjct: 780 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGI 839
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EH C+I L R G + E F+ MP P R + CR +G L A L E
Sbjct: 840 EHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLE 899
Query: 675 LNP 677
L+P
Sbjct: 900 LDP 902
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 254/514 (49%), Gaps = 34/514 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F N I Y K GN++ AR +FDEM R+ SW+ ML Y + G + LF M
Sbjct: 129 IFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWG 188
Query: 137 SGVSANQITYANVLRSSAEELELGVSK-QLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
GV N A+++ + + + Q+HG +VK G G+V + ++LV YG ++
Sbjct: 189 LGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVY 248
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
+A+++F+++ + N VSW ++ Y +GN E + ++ +M +E + TFA +C
Sbjct: 249 NAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 308
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G Q+ G II+ FE V SL M+ +E+A + D +E +IISW +
Sbjct: 309 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 368
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S YA G RE+ F+ W MR + +
Sbjct: 369 MISAYAHHGLCRESLRCFH---------W----------------------MRHLHNETN 397
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
TL +L+VC+ + +K G+ +HG + + SN+ + N LL +Y + G A + F
Sbjct: 398 STTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 457
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLE 494
M++ RD +SWN+++ Y + G+ + + +E +Q + TF + LAAC+N L
Sbjct: 458 AMTE-RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLI 516
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+ K +H +I + ++ ALV +Y K + A +V + D + N++I G
Sbjct: 517 ESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 576
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
NE EA++ + L++++GI ++IT +L AC
Sbjct: 577 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 610
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 207/411 (50%), Gaps = 11/411 (2%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K ++ L+ + +++ +A C++ + ++E++ + + ++ + + N + Y
Sbjct: 485 KILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMY 544
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
GK G + +A+ + MP+ D +WNA++G + +N P ++ + + G+ AN IT
Sbjct: 545 GKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMV 604
Query: 148 NVLRS-SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+VL + SA + L +H IV GF + +++SL+ Y KC + + +FD + N
Sbjct: 605 SVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGN 664
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ ++WN +V G G+EA+ +F +M + F+F+ L A + L+ EG Q+
Sbjct: 665 KSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQL 724
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG++IK+ FE D V + +MY KCG + D +L QP R+ +SW ++S +A G
Sbjct: 725 HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCF 784
Query: 327 REARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
++ARE F+EM P+ + +++ ++L+ L E L + M + V G+
Sbjct: 785 QKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFG----VFPGIE 840
Query: 383 LNVCAGLSEIKMGKEVH--GFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
VC + G+ H GFI N +LL R GNL AR
Sbjct: 841 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELAR 891
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 237/522 (45%), Gaps = 40/522 (7%)
Query: 125 GRTLELFLDMNHSGVSANQITYANV-LRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
G ++FL H+ + N L+ +E K LH + + ++
Sbjct: 75 GDIAKVFLQQQHTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNT 134
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L++ Y K + AR +FD+++++N SW+ ++ Y+ G +EAV +F +M + P
Sbjct: 135 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPN 194
Query: 244 NFTFANALFACSFLSSPY---EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
F A+ + ACS S Y EG Q+HG ++K GD V +L Y G + +A+
Sbjct: 195 GFMVASLITACS--RSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 252
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
L ++ + N++SWTS++ GY+ SG E ++ M + V
Sbjct: 253 LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSG----------------- 295
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+Q T + + C L + +G +V G I + + ++ V+N+L+ M
Sbjct: 296 --------------NQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISM 341
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFT 479
+ ++ A F M++ D +SWNA+++ YA G E++ F M + T
Sbjct: 342 FSSFSSVEEACYVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+LL+ C+++ +L+ G+ IH V++ + NV L+ +Y++ E A VF+ +
Sbjct: 401 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 460
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D+I NSM+ + + + + L++ + + G +H+TF L AC + + +
Sbjct: 461 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNP-ECLIESK 519
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ G L ++ +Y + G M E + + MP
Sbjct: 520 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP 561
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/605 (27%), Positives = 298/605 (49%), Gaps = 40/605 (6%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDG-GSWNAMLGAYTQNGFPGRTLELFL---D 133
+L I Y C +A LF ++ R +WN M+G + +NG ++LEL+ +
Sbjct: 178 YLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKN 237
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
N VSA+ T A S E L+ G +Q+H ++K F + + +SL+ Y K
Sbjct: 238 ENCKLVSAS-FTGAFTACSHGEVLDFG--RQVHCDVIKMNFQDDPYVCTSLLTMYAKSGS 294
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DA+++FD + +K N ++ ++ G +A+ ++ KM + +FT ++ L
Sbjct: 295 VEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSG 354
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS + S G +H +IK + + + +L MY KCG EDA
Sbjct: 355 CSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD-------------- 400
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+F M ER+V++W +M+AG+ ++ +K+ALD M K
Sbjct: 401 -----------------SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVK 443
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D + +++ GL +++G +HGF + S++FV+ +L+DMY K G SA +
Sbjct: 444 ADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 503
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISS 492
F M + + V+WN++++ Y+ G E ++ + +Q + T+L A +++++
Sbjct: 504 FSSMPNK-NLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAA 562
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L +GK +H + IR ++ AL+++Y KC CL+YA +F+ +++ NSMI G
Sbjct: 563 LLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAG 622
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + EA+ +F MK+ PD +TF ++ +C H G V+ L F MR +YG+ P
Sbjct: 623 YGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEP 682
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
++EHY ++ L R G + + F+ MP + + + CR + LGE A L
Sbjct: 683 RMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNL 742
Query: 673 NELNP 677
++ P
Sbjct: 743 LKMEP 747
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 149/605 (24%), Positives = 278/605 (45%), Gaps = 61/605 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + CAS + R + +++VT ++ I Y KCG L A +FD+M
Sbjct: 58 FPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS 117
Query: 105 E-RDGGS----WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
E RD WN ++ Y + G L F M +EL
Sbjct: 118 ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRM--------------------QELSW 157
Query: 160 GVS-KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVR 217
++ +Q+HG I++ F G+ LE++L+ Y C +A +F ++N+ N V+WNV++
Sbjct: 158 YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG 217
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
++ G ++++ ++ E+ + ++ +F A ACS G Q+H +IK++F+
Sbjct: 218 GFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQD 277
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL MY K G +EDA+ + DQ ++ + +++S + +GR +A L+N+M
Sbjct: 278 DPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK 337
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
AG T +D T+ +L+ C+ + G+
Sbjct: 338 -----------AGET--------------------PVDSFTISSLLSGCSVVGSYDFGRT 366
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + SN+ + +ALL MY KCG+ A FY M + RD V+W +++ G+ +
Sbjct: 367 VHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTM-KERDVVAWGSMIAGFCQNR 425
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ ++A+ F M+ E + ++++A + ++E G IH F I+ E +V
Sbjct: 426 RFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVAC 485
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+LV++Y+K E A VF + +++ NSMI + N ++ + + + G
Sbjct: 486 SLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 545
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D ++ +L+A + L + + + + I L+ +I +Y + G +K +
Sbjct: 546 DSVSITTVLVA-VSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLI 604
Query: 637 VNRMP 641
MP
Sbjct: 605 FENMP 609
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 250/539 (46%), Gaps = 59/539 (10%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
S N+ + A Q G + LEL HS ++ + T+ ++L++ A L + +H I
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-----NAVSWNVIVRRYLVAGN 224
V G + + +SL++ Y KC ++ A ++FD + + WN ++ Y G+
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E + F +M + L++ A G QIHG II+ FEGD + +
Sbjct: 142 FEEGLAQFCRM-----QELSWYMA--------------GRQIHGYIIRNMFEGDPYLETA 182
Query: 285 LTEMYVKCGRLEDARGLLDQPDER-NIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L MY C R +A L + + R NI++W
Sbjct: 183 LIGMYSSCSRPMEAWSLFGKLENRSNIVAW------------------------------ 212
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
N M+ G+ + +W+++L+ L + + + C+ + G++VH +
Sbjct: 213 -NVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVI 271
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ ++ + +V +LL MY K G++ A+ F Q+ + ++ NA+++ + G++ +A+
Sbjct: 272 KMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-NAMISAFIGNGRAYDAL 330
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+++M+ ET FT +LL+ C+ + S + G+ +H VI+ + NV + AL+ +Y
Sbjct: 331 GLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMY 390
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC E A VF DV+ SMI GFC N R ++AL++F M+KEG+K D
Sbjct: 391 YKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMT 450
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ A + NV+L K G+ + ++ +Y ++G+ + E + MP
Sbjct: 451 SVISAGLGLENVELG-HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 508
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 163/338 (48%), Gaps = 8/338 (2%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
+ PV + L C+ + R + + ++ V + + + Y KCG+ +DA
Sbjct: 340 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 399
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-- 154
+F M ERD +W +M+ + QN L+LF M GV A+ +V+ +
Sbjct: 400 DSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 459
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E +ELG +HG +KRG +V + SLVD Y K A +F + NKN V+WN
Sbjct: 460 ENVELG--HLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNS 517
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y G + ++ + ++L+ + + L A S +++ +G +H I++
Sbjct: 518 MISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQ 577
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D V +L +MYVKCG L+ A+ + + RN+++W S+++GY G EA LF
Sbjct: 578 IPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFK 637
Query: 335 EMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR 368
EM +++ A++ + S + +E L+ LMR
Sbjct: 638 EMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMR 675
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 167/398 (41%), Gaps = 56/398 (14%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+R+ + Q + + S N ++ + G +A+ + K + FTF + L C+
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-----NII 311
LS+ Y G IH I+ + + D + SL MYVKCG L A + D+ E +I
Sbjct: 68 LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
W ++ GY G E F M E +SW
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQE---LSW--------------------------- 157
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
G+++HG+I RN + + ++ AL+ MY C A
Sbjct: 158 --------------------YMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAW 197
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANI 490
F ++ R + V+WN ++ G+ G E+++ +S + E + +F AC++
Sbjct: 198 SLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHG 257
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
L+ G+Q+HC VI+ ++ + +L+ +Y K +E A +VF + +V + N+MI
Sbjct: 258 EVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMI 317
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
F N R +AL ++ MK D T +L C
Sbjct: 318 SAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGC 355
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 168/606 (27%), Positives = 295/606 (48%), Gaps = 47/606 (7%)
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSG---VSANQ 143
+ L DA LFD MP RD ++ +L + G FPG + LF + S A+
Sbjct: 12 ARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPG-AMALFSRLRASSPPLAPADP 70
Query: 144 ITYANVLRSSAEELE---LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ V +S A + L + LH V+ +V + ++L D Y K + A ++
Sbjct: 71 FVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKV 130
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD++ +KN VSW +V AG EA+ F +M + ++ +A AL AC+
Sbjct: 131 FDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLL 190
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G ++H K+ + V +L +Y +C ++ A + +
Sbjct: 191 SRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSR---------------- 234
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTK---DIDQ 376
M R+V +W +++ Y ++ KEA++ FV ++R+ + ++
Sbjct: 235 ---------------MGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNE 279
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T ++ CA ++ + +G+++H R ++ V+N+L+ +Y + SA ++
Sbjct: 280 YTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFR 339
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET---RPSKFTFETLLAACANISSL 493
S +D VSW+A+++GYA+ G +E+A F EM+ + RP++FT +LL+ CA +SL
Sbjct: 340 ESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASL 399
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ G+Q+H + E + + R AL+++Y K + A VF DV+ +MI+G+
Sbjct: 400 DAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGY 459
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ ++ALE+F M G+KPDH+TF G+L AC H G V+L L++ + M YG+ P
Sbjct: 460 AEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPA 519
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML-RKIFDKCRKNGYATLGEWAARRL 672
EHY C++ L R G + E E+ + ++ N ++ + C G G+ AA R
Sbjct: 520 KEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERA 579
Query: 673 NELNPW 678
E PW
Sbjct: 580 MEAEPW 585
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 42/472 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASS---KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
L +P SL +F+ CA++ + + A L + V VF+ + Y K
Sbjct: 65 LAPADPFVLSL---VFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKA 121
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G L A +FDEMP ++ SW ++ + T+ G L F +M SGV + YA L
Sbjct: 122 GCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAAL 181
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ A+ L +++H K G + ++L Y +C + A + ++
Sbjct: 182 TACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVA 241
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFACSFLSSPYEGMQI 266
+W ++ Y+ G KEA+ F +MLRE+ P +T+A + AC+ ++ G Q+
Sbjct: 242 AWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQL 301
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVK-CGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
H + F V SL +Y + G L A + + ++++SW++I+SGYA G
Sbjct: 302 HAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGL 361
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A LF EM + G R ++ TL +L+V
Sbjct: 362 AEDAFALFREMRHHS---------GCPRP--------------------NEFTLASLLSV 392
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA + + G+++H + + +AL+DMY K G++ A I F + D VS
Sbjct: 393 CATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSH-RVKDDVVS 451
Query: 446 WNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
W A++ GYA G S++A+ F EM +P TF +L AC + +E G
Sbjct: 452 WTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELG 503
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 25 TLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI 84
L + + H P ++L A L +CA++ ++ R+L + V + + I
Sbjct: 367 ALFREMRHHSGCPRPNEFTL-ASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALI 425
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
+ YGK G++ DA +F + D SW AM+ Y ++G + LELF +M H G+ + +
Sbjct: 426 DMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHV 485
Query: 145 TYANVLRS--SAEELELGVS-----KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
T+ VL + A E+ELG+ Q++GL + G V VD G+ + +A
Sbjct: 486 TFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCV------VDLLGRAGRINEA 539
Query: 198 RRMFDDI--QNKNAVSWNVIVRRYLVAGNGKE 227
+ I ++ V W ++R A G+E
Sbjct: 540 EELIGKIAANERDGVVWTSLLR--ACAARGEE 569
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 286/587 (48%), Gaps = 43/587 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+NA + + Q G +EL S + TY++VL+ A K++H +I
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ L LV Y C + + RR+FD ++ KN WN +V Y G+ KE++
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 231 MFFKMLREDI---RPLN-FTFANALFACSFLS-----SPY--EGMQIHGVII--KIDFEG 277
+F M+ + I RP + F + L +S S Y G+ G+ I ++ + G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 278 DDVVLGSLTEMYVKC---GRLEDARGL----LDQPDERNIISWTSIVSGYAISGRIREAR 330
DV L ++ + V C G L + + + ER I +++ Y+ G + A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +M ERNV+SW +M+AGYTR A+ + M K +D V + IL+ CA
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ GK+VH +I N+ SN+FV NAL+DMY KCG++ +A F M +D +SWN ++
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV-KDIISWNTMI 425
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
E +P T +L ACA++S+LE+GK+IH +++RN Y
Sbjct: 426 G--------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ ALV++Y KC L A +F S D++ MI G+ + G EA+ F M+
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
GI+PD ++F IL AC H G ++ +FF M+ + I P+LEHY CM+ L R G +
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ +F+ +P P + + CR L E A R+ EL P
Sbjct: 586 SKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEP 632
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 216/543 (39%), Gaps = 104/543 (19%)
Query: 45 YAHLFQLCASSKAIVEARKLES---------------NLVTFYPT--------------- 74
Y+ + QLCA K+ + +K+ S LV+FY T
Sbjct: 102 YSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 75 -PPVFLLNRAIECYGKCGNL--------------------DDARGLFDEMPERDGGSWNA 113
V+L N + Y K G+ + A LFD++ +RD SWN+
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNS 221
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ Y NG R L ++ M + G+ + T +VL A L + K +H L +K
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F + ++L+D Y KC + A R+F+ + +N VSW ++ Y G A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M +E ++ + L AC+ S G +H I + E + V +L +MY KCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401
Query: 294 RLEDARGLLDQPDERNIISWTSIVS------------------------GYAISGRIRE- 328
+E A + ++IISW +++ G I G I
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRN 461
Query: 329 ------------------------ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
AR LF+ +P ++++SW M+AGY EA+
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYR 422
MR + D+V+ IL C+ ++ G +I +ND++ + + ++D+
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLS 580
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET 482
+ GNL A + + D W A+L G R E +E +E P +
Sbjct: 581 RTGNLSKAYEFIETLPIAPDATIWGALLCG-CRNYHDIELAEKVAERVFELEPENSGYYV 639
Query: 483 LLA 485
LLA
Sbjct: 640 LLA 642
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 142/309 (45%), Gaps = 41/309 (13%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
++A +ESNL F+ N ++ Y KCG+++ A +F M +D SWN M+G
Sbjct: 378 IKANNMESNL---------FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE- 427
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ + T A VL + A L K++HG I++ G+ +
Sbjct: 428 --------------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++LVD Y KC V+ AR +FD I +K+ VSW V++ Y + G G EA+ F +M
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 527
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLE 296
I P +F + L+ACS +G + I+K DF + + + ++ + G L
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLS 586
Query: 297 DARGLLDQ-PDERNIISWTSIVSG----YAISGRIREARELFNEMPERNVISWNAMLAG- 350
A ++ P + W +++ G + I + A +F PE + + +LA
Sbjct: 587 KAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENS--GYYVLLANI 644
Query: 351 YTRSLLWKE 359
Y + W+E
Sbjct: 645 YAEAEKWEE 653
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+ G LK D A + CAS A+ +++ ++ + + N ++ Y
Sbjct: 423 TMIGELKPDSRT----MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG L AR LFD +P +D SW M+ Y +G+ + F +M +G+ +++++ +
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 149 VL 150
+L
Sbjct: 539 IL 540
>gi|168032055|ref|XP_001768535.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680248|gb|EDQ66686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 255/491 (51%), Gaps = 41/491 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP SY+ Y L + C K + E + + +++ P F+LN + Y KCG+L DAR
Sbjct: 46 EPSSYA-YVCLLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFVLNALVNMYMKCGSLVDAR 104
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAE 155
+FD M ERD ++ ML Y + G+P +++ M V ++IT+ +L S+
Sbjct: 105 QVFDRMVERDMFTYTMMLTGYAKLGYPEDAYKMYEQMQKERVPVDRITFTTILNVCSTLR 164
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LE G+ ++H +V+ G ++IL ++L+D Y KC + A R+F ++ N++ V+WN++
Sbjct: 165 SLEKGM--KVHQDMVRGGIRPDIILGNTLIDMYAKCGNLKQAHRVFKEMDNRDIVTWNIM 222
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V G EA F ML E +P T+ + L AC+ L +G +H VI+K F
Sbjct: 223 VGGAARNGYFDEAFEFFKAMLDEGQKPDKVTYISILNACTSLE---QGTLLHSVIMKAGF 279
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D V +L M+ KCG + DA ++F +
Sbjct: 280 ELDVRVGTALVNMFSKCGSVVDAL-------------------------------KVFQK 308
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+P+RNV+SW ++++ Y ++ + AL+ M D+ ILNVCA L +I+ G
Sbjct: 309 LPQRNVVSWTSVISAYAQAGEPERALECYAKMLNEGMVADKRAYTTILNVCAMLGDIEKG 368
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K VHG I ++ +++I N L+DMY KCG L+ A F M+ RD VSW ++ G+ +
Sbjct: 369 KAVHGHIVQSGIATDIITENGLIDMYVKCGRLKDAYRLFQDMNV-RDVVSWTTLIEGWVQ 427
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
Q +EA+ +F++MQ E P+ TF +L ACA + SL GK+IH ++ N
Sbjct: 428 HRQYQEALDTFNDMQLEGVMPNTVTFLGVLKACAGMGSLVDGKRIHARIVEAGLAENAHI 487
Query: 515 RGALVEVYTKC 525
R AL ++Y KC
Sbjct: 488 RHALADMYAKC 498
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 242/475 (50%), Gaps = 39/475 (8%)
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
NG P +L + + G+ + Y +LR +L K +H + K F +
Sbjct: 30 NGQPKNSLHI---LEQRGIEPSSYAYVCLLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFV 86
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
++LV+ Y KC + DAR++FD + ++ ++ +++ Y G ++A M+ +M +E +
Sbjct: 87 LNALVNMYMKCGSLVDARQVFDRMVERDMFTYTMMLTGYAKLGYPEDAYKMYEQMQKERV 146
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
TF L CS L S +GM++H +++ D ++ +L +MY KCG
Sbjct: 147 PVDRITFTTILNVCSTLRSLEKGMKVHQDMVRGGIRPDIILGNTLIDMYAKCGN------ 200
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+++A +F EM R++++WN M+ G R+ + EA
Sbjct: 201 -------------------------LKQAHRVFKEMDNRDIVTWNIMVGGAARNGYFDEA 235
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+F M + D+VT ILN C L + G +H I + + ++ V AL++M
Sbjct: 236 FEFFKAMLDEGQKPDKVTYISILNACTSLEQ---GTLLHSVIMKAGFELDVRVGTALVNM 292
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFT 479
+ KCG++ A F ++ QR + VSW +V++ YA+ G+ E A+ +++M E K
Sbjct: 293 FSKCGSVVDALKVFQKLPQR-NVVSWTSVISAYAQAGEPERALECYAKMLNEGMVADKRA 351
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+ T+L CA + +E+GK +H ++++ +++ L+++Y KC L+ A R+F++ +
Sbjct: 352 YTTILNVCAMLGDIEKGKAVHGHIVQSGIATDIITENGLIDMYVKCGRLKDAYRLFQDMN 411
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
DV+ ++I G+ + + +EAL+ F M+ EG+ P+ +TF G+L AC G++
Sbjct: 412 VRDVVSWTTLIEGWVQHRQYQEALDTFNDMQLEGVMPNTVTFLGVLKACAGMGSL 466
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 191/396 (48%), Gaps = 34/396 (8%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K PV + + +C++ +++ + K+ ++V P + L N I+ Y KCGNL
Sbjct: 143 KERVPVDRITFTTILNVCSTLRSLEKGMKVHQDMVRGGIRPDIILGNTLIDMYAKCGNLK 202
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
A +F EM RD +WN M+G +NG+ E F M G +++TY ++L ++
Sbjct: 203 QAHRVFKEMDNRDIVTWNIMVGGAARNGYFDEAFEFFKAMLDEGQKPDKVTYISIL-NAC 261
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
LE G LH +I+K GF +V + ++LV+ + KC + DA ++F + +N VSW
Sbjct: 262 TSLEQGT--LLHSVIMKAGFELDVRVGTALVNMFSKCGSVVDALKVFQKLPQRNVVSWTS 319
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y AG + A+ + KML E + + L C+ L +G +HG I++
Sbjct: 320 VISAYAQAGEPERALECYAKMLNEGMVADKRAYTTILNVCAMLGDIEKGKAVHGHIVQSG 379
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D + L +MYVKCGRL+DA L + R+++SWT+++ G+ + +EA + FN
Sbjct: 380 IATDIITENGLIDMYVKCGRLKDAYRLFQDMNVRDVVSWTTLIEGWVQHRQYQEALDTFN 439
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+M V+ + VT +L CAG+ +
Sbjct: 440 DMQLEGVMP-------------------------------NTVTFLGVLKACAGMGSLVD 468
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
GK +H I + N + +AL DMY KC + +A
Sbjct: 469 GKRIHARIVEAGLAENAHIRHALADMYAKCDSCGNA 504
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 190/394 (48%), Gaps = 37/394 (9%)
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
I P ++ + L C+ + EG +H + K DF VL +L MY+KCG L DAR
Sbjct: 45 IEPSSYAYVCLLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFVLNALVNMYMKCGSLVDAR 104
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
++F+ M ER++ ++ ML GY + ++
Sbjct: 105 -------------------------------QVFDRMVERDMFTYTMMLTGYAKLGYPED 133
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A M+K +D++T ILNVC+ L ++ G +VH + R +I + N L+D
Sbjct: 134 AYKMYEQMQKERVPVDRITFTTILNVCSTLRSLEKGMKVHQDMVRGGIRPDIILGNTLID 193
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KCGNL+ A F +M R D V+WN ++ G AR G +EA F M E +P K
Sbjct: 194 MYAKCGNLKQAHRVFKEMDNR-DIVTWNIMVGGAARNGYFDEAFEFFKAMLDEGQKPDKV 252
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
T+ ++L AC +SLEQG +H +++ +E++V ALV +++KC + A++VF++
Sbjct: 253 TYISILNAC---TSLEQGTLLHSVIMKAGFELDVRVGTALVNMFSKCGSVVDALKVFQKL 309
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
+V+ S+I + ALE + M EG+ D + IL C G+++
Sbjct: 310 PQRNVVSWTSVISAYAQAGEPERALECYAKMLNEGMVADKRAYTTILNVCAMLGDIEKGK 369
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ + GI + +I +Y + G +K+
Sbjct: 370 AVHGHI-VQSGIATDIITENGLIDMYVKCGRLKD 402
>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
Length = 763
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 283/610 (46%), Gaps = 42/610 (6%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ N I+ Y KCG+L DA+ +FD RD +W AM+ Y +NG R L LF M
Sbjct: 170 FVANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQ 229
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G N+ Y ++LR L ++H ++ + + + LV Y KC + A
Sbjct: 230 GCMYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRA 289
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL--NFTFANALFACS 255
R+ F I+ +N+VSW V++ Y+ G ++ + +F M E + FT + L ACS
Sbjct: 290 RKAFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACS 349
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L + EG IH ++ +E D + +L MY KC LE
Sbjct: 350 SLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLE------------------- 390
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
EAR +F+ + +++ +SW ++++ Y + E+L M D
Sbjct: 391 ------------EARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPD 438
Query: 376 QVTLGLILNVCAGLSE----IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
++TL + C L + + +G+ VH I + N V AL+ MY +CG L A
Sbjct: 439 EMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAA 498
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F +++ + D VSWNA+LT G++EEA+ M+ E P TF ++AAC+ +
Sbjct: 499 AVFNKLTPK-DVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSAL 557
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF---KESSSLDVIICN 547
+ +H V + + V ALV +Y KC L+ A VF + S L V N
Sbjct: 558 KDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWN 617
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
S++ + G A+E F +M ++PD IT +L AC H G + L +F SM
Sbjct: 618 SILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHD 677
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
+G+ P EHY C+I L R G E E+ + MPF P + + C+ + A G
Sbjct: 678 FGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASCQTSKDAGRGSR 737
Query: 668 AARRLNELNP 677
AA +L ++P
Sbjct: 738 AAMQLIRMDP 747
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 232/506 (45%), Gaps = 36/506 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
+ LN + Y KCG+L +AR F+++ RD SW ++ AYT+NG G LELF M
Sbjct: 68 YALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADE 127
Query: 138 GVSANQITYANVLRSSAEELE-LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G + TY L + A L L +H G + ++L+D Y KC + D
Sbjct: 128 GCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLD 187
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+++FD Q ++AV+W ++ Y G + A+ +F M ++ + + L C
Sbjct: 188 AKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECIS 247
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G +IH +I I+ + D + L +MY KCG L AR + RN +SWT +
Sbjct: 248 GRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVM 307
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y G+ + LF+ M + D+D
Sbjct: 308 LAAYIDHGKQEQGLCLFHTMD-----------------------------LEGAQADMDA 338
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
TL +L+ C+ L G+ +H + Y +I + NAL+ MY KC L AR F
Sbjct: 339 FTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDN 398
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS---- 491
+ Q + +VSW ++++ Y + + +E++ F M + +P + T L AAC +
Sbjct: 399 I-QDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGR 457
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
L G+ +H + ++ N V ALV +Y +C CL A VF + + DV+ N+M+
Sbjct: 458 GLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLT 517
Query: 552 GFCHNERGREALEVFGLMKKEGIKPD 577
EAL + M+ EG+ PD
Sbjct: 518 ATVEAGEAEEALRLHQRMRAEGVMPD 543
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 209/465 (44%), Gaps = 73/465 (15%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD---------------------- 202
LH V+ G + + ++++D + +C + +AR +FD
Sbjct: 17 LHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNM 76
Query: 203 ---------------DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
+Q ++AVSW ++ Y G G EA+ +F +M E P T+
Sbjct: 77 YAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTY 136
Query: 248 ANALFAC-SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
AL AC S L GM +H + V +L +MY KCG L DA+ + D
Sbjct: 137 LAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDSTQ 196
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
R+ ++WT+++ GYA +G A LF M ++ + Y R + L
Sbjct: 197 ARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCM--------YNREA-------YTSL 241
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+R+ C ++ G +H + + + + N L+ MY KCG+
Sbjct: 242 LRE----------------CISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGD 285
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK---FTFETL 483
L AR FY + +RR+ VSW +L Y G+ E+ + F M E + FT +
Sbjct: 286 LHRARKAFYSI-ERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCV 344
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+AC+++ + +G+ IH ++ YE+++ + ALV +Y KC CLE A RVF
Sbjct: 345 LSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSR 404
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ S+I + +ERG E+L++F M +G++PD +T + AC
Sbjct: 405 VSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAAC 449
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 204/462 (44%), Gaps = 42/462 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L + C S +A+ ++ + L+ + N ++ Y KCG+L AR F +
Sbjct: 238 YTSLLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIE 297
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA-NVLRSSAEELELGVSK 163
R+ SW ML AY +G + L LF M+ G A+ + + + S+ L G
Sbjct: 298 RRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEG 357
Query: 164 Q-LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q +H +V G+ ++ L+++LV Y KC + +ARR+FD+IQ+K+ VSW I+ Y+
Sbjct: 358 QAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQH 417
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDD-- 279
G E++ MF M + ++P T + AC L G+ + GV +I G D
Sbjct: 418 ERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQN 477
Query: 280 -VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VV +L MY +CG L +A + ++ ++++SW ++++ +G EA L M
Sbjct: 478 PVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRA 537
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V+ D T +++ C+ L + + V
Sbjct: 538 EGVMP-------------------------------DAATFAVVVAACSALKDEATSRAV 566
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV---SWNAVLTGYAR 455
H + + AL+ MY KCG L A F +M QR + +WN++L A+
Sbjct: 567 HTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERM-QRHSVLAVAAWNSILAALAK 625
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
G A+ F M +P T +L AC++ L G
Sbjct: 626 HGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATG 667
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 13/332 (3%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ C+S A E + + + LV + L N + Y KC L++AR +FD + ++
Sbjct: 344 VLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKS 403
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE-----LGVS 162
SW +++ AY Q+ +L++FL MN G+ +++T + L ++ +LE L V
Sbjct: 404 RVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTL-SALCAACCQLEDRGRGLAVG 462
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ +H I G N ++ ++LV Y +C + +A +F+ + K+ VSWN ++ + A
Sbjct: 463 RGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEA 522
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +EA+ + +M E + P TFA + ACS L +H + +G V
Sbjct: 523 GEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSG 582
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNII---SWTSIVSGYAISGRIREARELFNEMP-- 337
+L MY KCGRL+DA + ++ +++ +W SI++ A G A E F M
Sbjct: 583 TALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTMA 642
Query: 338 --ERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+ + I+ ML + S L LD+ M
Sbjct: 643 YVQPDGITITVMLHACSHSGLLATGLDYFLSM 674
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 190/679 (27%), Positives = 313/679 (46%), Gaps = 82/679 (12%)
Query: 10 KNILSKSSPKP-----------------TPSKTLTKTISGH----LKSDEPVSYSLYAHL 48
K LS S PKP T S + IS + L P SY+ + +
Sbjct: 25 KKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYA-FPVV 83
Query: 49 FQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + + +++ +++V + Y + V + N + YGKC LDD +FD + ERD
Sbjct: 84 LKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERD 143
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-----EELELGVS 162
SWN+++ A+ + LE F M + + T + + + + E L LG
Sbjct: 144 LVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLG-- 201
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+HG + G + ++L+ Y + DA+ +F +++N +SWN ++ +
Sbjct: 202 KQIHGYCFRNGHW-STFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQN 260
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVV 281
EA++ M+ E ++P T A+ L ACS+L G +IH ++ D + V
Sbjct: 261 ERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFV 320
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY CG++ R + D ER W ++++GYA + +A LF EM
Sbjct: 321 GSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEM----- 375
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+AG L TT T+ I+ A + +HG+
Sbjct: 376 ----VAVAG---------------LCPNTT------TMASIVPASARCESFFSKESIHGY 410
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + D + +V NAL+DMY + + ++ F M + RD VSWN ++TGY G +
Sbjct: 411 VIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSM-EVRDIVSWNTMITGYVISGCYND 469
Query: 462 AMTSFSEMQWET--------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
A+ EMQ +P+ T T+L CA++++L +GK+IH + +RN
Sbjct: 470 ALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNA 529
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
V ALV++Y KC CL + RVF + +VI N +++ + + G EALE+F
Sbjct: 530 LASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFK 589
Query: 568 LMKKEG-----IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
M +G +KP +T IL AC H G V L+ F M+ +GI P +HY C+
Sbjct: 590 DMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVAD 649
Query: 623 LYCRYGYMKELEDFVNRMP 641
L R G +++ DF+N MP
Sbjct: 650 LLGRAGKVEQAYDFINTMP 668
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/619 (27%), Positives = 295/619 (47%), Gaps = 39/619 (6%)
Query: 78 FLLNRAIECYGKCGNLD-DARGLFDEMPERDGG---SWNAMLGAYTQNGFPGRTLELFLD 133
F+ +E Y KCG +A L + +DGG SW ML + +NG G E+++
Sbjct: 151 FVGTSLVEFYTKCGCCSVEAWKLLSLV--KDGGDVVSWTTMLSSLVENGKWGEAFEIYVK 208
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M SGV N+ T+ +L + + L L K LH ++ G N++L++++VD Y KC
Sbjct: 209 MIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRR 268
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
M DA ++ + + W ++ + +EA+ +F M + P NFT+++ L A
Sbjct: 269 MVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNA 328
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
S + S G Q H +I + E D + +L +MY+KC +
Sbjct: 329 SSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHI------------------ 370
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
A ++F E+ NV+ W +++AG+ L +++ M+
Sbjct: 371 ------------TTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVR 417
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+ T+ IL C+ + +HG I + +I V+NAL+D Y G + A
Sbjct: 418 PNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSV 477
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
M+ RD +++ + ++G A+ M + + +F+ + L+A A + +
Sbjct: 478 IGTMN-LRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGT 536
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+E GKQ+HC+ +++ ++ +LV +Y+KC + A R FK+ S D N +I G
Sbjct: 537 METGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISG 596
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F N AL F M+ G+KPD IT ++ AC H G ++L L++F SM+ +Y I P
Sbjct: 597 FSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITP 656
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+L+HY C++ L R G ++E + +M F P + + + + C +G LGE ARR
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRC 716
Query: 673 NELNPWAPFQFKITTNRFD 691
EL+P P + + N +D
Sbjct: 717 LELDPSDPAIYLLLANLYD 735
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/553 (25%), Positives = 253/553 (45%), Gaps = 41/553 (7%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
+S ++ E + S ++ ++L N + Y K + AR LFDEMP RD SW
Sbjct: 26 NSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTT 85
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
+L ++T+ L+LF M SG N+ T ++ LRS E Q+H VK G
Sbjct: 86 ILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLG 145
Query: 174 FCGNVILESSLVDAYGKCMVMT-DARRMFDDIQN-KNAVSWNVIVRRYLVAGNGKEAVVM 231
N + +SLV+ Y KC + +A ++ +++ + VSW ++ + G EA +
Sbjct: 146 LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEI 205
Query: 232 FFKMLREDIRPLNFTFANALFAC-SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+ KM+ + P FTF L A SFL Y G +H +I E + V+ ++ +MY
Sbjct: 206 YVKMIESGVYPNEFTFVKLLGAVSSFLGLSY-GKLLHAHLIMFGAELNLVLKTAVVDMYS 264
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KC R+ DA + + E ++ WT+++SG+ + ++REA +F +M ++ N
Sbjct: 265 KCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNN----- 319
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
T +LN + + + +G++ H + +
Sbjct: 320 --------------------------FTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDD 353
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+++ NAL+DMY KC ++ + + ++ + + W +++ G+A + + E++ F+EMQ
Sbjct: 354 LYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQ 412
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
RP+ FT +L AC+ SL +H +I+ +I++ ALV+ Y ++
Sbjct: 413 AAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMID 472
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGRE--ALEVFGLMKKEGIKPDHITFHGILLA 587
A V + D I + N++G AL+V M +GIK D + L A
Sbjct: 473 EAWSVIGTMNLRDSITYTCLAARL--NQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSA 530
Query: 588 CIHEGNVKLALQF 600
G ++ Q
Sbjct: 531 AAGLGTMETGKQL 543
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/558 (24%), Positives = 249/558 (44%), Gaps = 74/558 (13%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L +S + + L ++L+ F + L ++ Y KC + DA + + P
Sbjct: 221 FVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTP 280
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E D W ++ +TQN + +F DM SG+ N TY+++L +S+ L L + +Q
Sbjct: 281 EYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQ 340
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKC-MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
H ++ G ++ + ++LVD Y KC + T+A ++F +I + N + W ++ +
Sbjct: 341 FHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGF-AEK 399
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+++ +F +M +RP +FT + L ACS S M +HG IIK + D V
Sbjct: 400 RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVAN 459
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L + Y G +++A ++ + R+ I++T + + G A ++ M +
Sbjct: 460 ALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGI-- 517
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
+D+ +L L+ AGL ++ GK++H +
Sbjct: 518 -----------------------------KMDEFSLASFLSAAAGLGTMETGKQLHCYSV 548
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ + VSN+L+ +Y KCG++ A F +S+ D SWN +++G++ G A+
Sbjct: 549 KSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISE-PDAFSWNGLISGFSWNGLISHAL 607
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
++F +M+ +P T +L++AC++ LE G
Sbjct: 608 STFDDMRLAGVKPDSITLLSLISACSHGGLLELG-------------------------- 641
Query: 523 TKCCCLEYAIRVFKE---SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
LEY + KE + LD +C +LG RG E G+++K KPD +
Sbjct: 642 -----LEYFHSMQKEYHITPKLDHYMCLVDLLG-----RGGRLEEAMGVIEKMSFKPDSL 691
Query: 580 TFHGILLACIHEGNVKLA 597
+L AC GNV L
Sbjct: 692 ICKTLLNACNLHGNVALG 709
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 44/364 (12%)
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+R L+F +N+L EG+ IH IIK+ + D + +L +Y K
Sbjct: 19 LRVLSFCNSNSL---------KEGICIHSPIIKLGLQHDLYLTNNLLSLYAK-------- 61
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ + AR LF+EMP R+V+SW +L+ +T++ +
Sbjct: 62 -----------------------TFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSD 98
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL +M + + ++ TL L C L E + G ++H + N FV +L++
Sbjct: 99 ALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVE 158
Query: 420 MYRKCGNLRSARIW--FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
Y KCG S W + D VSW +L+ G+ EA + +M + P+
Sbjct: 159 FYTKCGCC-SVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPN 217
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+FTF LL A ++ L GK +H +I E+N+V + A+V++Y+KC + AI+V
Sbjct: 218 EFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSN 277
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
+ DV + ++I GF N + REA+ VF M+ G+ P++ T+ +L A ++ L
Sbjct: 278 LTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDL 337
Query: 597 ALQF 600
QF
Sbjct: 338 GEQF 341
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S+++ A + C+ ++++V L +++ + + N ++ Y G +D+A
Sbjct: 418 PNSFTMSA-ILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWS 476
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+ M RD ++ + Q G G L++ + M + G+ ++ + A+ L ++A
Sbjct: 477 VIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGT 536
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ KQLH VK GF + +SLV Y KC + DA R F DI +A SWN ++
Sbjct: 537 METGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISG 596
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEG 277
+ G A+ F M ++P + T + + ACS G++ H + +
Sbjct: 597 FSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITP 656
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
L ++ + GRLE+A G++++
Sbjct: 657 KLDHYMCLVDLLGRGGRLEEAMGVIEK 683
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 282/586 (48%), Gaps = 37/586 (6%)
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DAR +F EM +R WN +L + ++ L F M + T L++
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 155 EELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E E+ + +HG + K G ++ + SSL+ Y KC M +A RMFD+++ + V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 214 VIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
+V + G+ +AV F +M + D+ P T + AC+ LS+ G +HG +I+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F D ++ SL Y K S +EA L
Sbjct: 192 RGFSNDLSLVNSLLNCYAK-------------------------------SRAFKEAVNL 220
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F + E++VISW+ ++A Y ++ EAL M + + T+ +L CA ++
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL 280
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G++ H R + + VS AL+DMY KC + A F ++ R+D VSW A+++G
Sbjct: 281 EQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISG 339
Query: 453 YARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+ G + ++ FS M E TRP +L +C+ + LEQ K H +VI+ ++
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM- 569
N +LVE+Y++C L A +VF + D ++ S+I G+ + +G +ALE F M
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
K +KP+ +TF IL AC H G + L+ F M Y + P LEHY ++ L R G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ + RMPF+PT +L + CR + + E A++L EL
Sbjct: 520 LDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 565
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 234/458 (51%), Gaps = 37/458 (8%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSAN 142
I Y KCG + +A +FDE+ + D +W++M+ + +NG P + +E F M S V+ +
Sbjct: 103 IYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
++T ++ + + + + +HG +++RGF ++ L +SL++ Y K +A +F
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I K+ +SW+ ++ Y+ G EA+++F M+ + P T L AC+ +
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G + H + I+ E + V +L +MY+KC E+A + + ++++SW +++SG+ +
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G + E F+ M +L TR D + + +
Sbjct: 343 NGMAHRSIEEFSIM----------LLENNTRP--------------------DAILMVKV 372
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L C+ L ++ K H ++ + + SN F+ +L+++Y +CG+L +A F ++ +D
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KD 431
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIH 500
V W +++TGY G+ +A+ +F+ M E +P++ TF ++L+AC++ + +G +I
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 501 CFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFK 536
++ N Y + N+ LV++ + L+ AI + K
Sbjct: 492 KLMV-NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+N + CY K +A LF + E+D SW+ ++ Y QNG L +F DM G
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N T VL++ A +L ++ H L +++G V + ++LVD Y KC +A
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFL 257
+F I K+ VSW ++ + + G ++ F ML E + RP L +CS L
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ H +IK F+ + + SL E+Y +CG L +A + + ++ + WTS++
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439
Query: 318 SGYAISGRIREARELFNEMPER-----NVISWNAMLAGYTRSLLWKEALDFVFLM 367
+GY I G+ +A E FN M + N +++ ++L+ + + L E L LM
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ + +A+ S ++ + F+ +E Y +CG+L +A +F+ + +D W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 112 NAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRS 152
+++ Y +G + LE F M S V N++T+ ++L +
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 253/489 (51%), Gaps = 35/489 (7%)
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVV 281
G EA+ ++ + +R F + L C+ G +H + F+ +V
Sbjct: 41 GRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIV 100
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L MY +CGR +AR + D+ RN+ SW +++GYA G + AR+LF+ M E++V
Sbjct: 101 ANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV 160
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN ++ Y + + EA+ R+ + + +L +C L E+++ K+VHG
Sbjct: 161 VSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQ 220
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARI----------------------W------ 433
+ + SN+ +S++++D Y KCG +R AR W
Sbjct: 221 VLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSA 280
Query: 434 ---FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
F+QM ++ + VSW+A+++GYAR EA+ F++M ++ P ++TF + L ACA+
Sbjct: 281 SELFHQMPEK-NPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACAS 339
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-ESSSLDVIICNS 548
I++L+ GKQ+H ++IR + N + +L+++Y+KC LE + VF + DV++ N+
Sbjct: 340 IAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNT 399
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI N G +A+++F M + G+KPD ITF IL AC H G V+ L+FF +M +
Sbjct: 400 MISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDH 459
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
G+ P EHY C+I L R G EL + + M P + + CR + LG
Sbjct: 460 GVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIELGRKV 519
Query: 669 ARRLNELNP 677
A R+ EL P
Sbjct: 520 AERVIELKP 528
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 183/314 (58%), Gaps = 1/314 (0%)
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
++ Y K + +AR++FD + K+ VSWN IV Y G EA+ ++ R D+
Sbjct: 135 MLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFN 194
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
F+FA L C L Q+HG ++ F + V+ S+ + Y KCG + AR L D
Sbjct: 195 AFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFD 254
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ++I +WT+IVSGYA G + A ELF++MPE+N +SW+A+++GY R+ L EALD+
Sbjct: 255 EMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDY 314
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
M K + +Q T L CA ++ +K GK+VHG++ R + N V ++L+DMY K
Sbjct: 315 FTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSK 374
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG L ++ F+ M ++D V WN +++ A+ G E+AM F++M + +P + TF
Sbjct: 375 CGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIV 434
Query: 483 LLAACANISSLEQG 496
+L+AC++ +++G
Sbjct: 435 ILSACSHSGLVQEG 448
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 176/341 (51%), Gaps = 40/341 (11%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
VEARK+ + ++ N + Y K G++++AR LFD M E+D SWN ++ AY
Sbjct: 115 VEARKVFDKM----SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAY 170
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ G + L+ D + N ++A VL + EL ++KQ+HG ++ GF N+
Sbjct: 171 AKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNL 230
Query: 179 ILESSLVDAYGKCMVMTDARRMFDD-------------------------------IQNK 207
+L SS+VDAY KC M AR +FD+ + K
Sbjct: 231 VLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEK 290
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
N VSW+ ++ Y G EA+ F KM++ I P +TF++ L AC+ +++ G Q+H
Sbjct: 291 NPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVH 350
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRI 326
G +I+ F + +V+ SL +MY KCG LE + + ++++++ W +++S A +G
Sbjct: 351 GYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHG 410
Query: 327 REARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDF 363
+A ++FN+M E + I++ +L+ + S L +E L F
Sbjct: 411 EKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 173/398 (43%), Gaps = 54/398 (13%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE-- 102
+A + LC K + A+++ ++ + L + ++ Y KCG + AR LFDE
Sbjct: 198 FAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEML 257
Query: 103 -----------------------------MPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
MPE++ SW+A++ Y +N L+ F
Sbjct: 258 VKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTK 317
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G++ Q T+++ L + A L KQ+HG +++ F N I+ SSL+D Y KC +
Sbjct: 318 MMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGM 377
Query: 194 MTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ + +F + NK + V WN ++ G+G++A+ MF M+ ++P TF L
Sbjct: 378 LEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILS 437
Query: 253 ACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
ACS EG++ HGV D E ++ L + + + +P
Sbjct: 438 ACSHSGLVQEGLRFFKAMTYDHGVF--PDQEHYSCLIDLLGRAGCFVELVNELENMSCKP 495
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
D+R W++++ RI EL ++ ER VI + SL A + F
Sbjct: 496 DDR---VWSALLG----VCRIHNNIELGRKVAER-VIELKPQSSAAYVSL----ASLYAF 543
Query: 366 LMR-KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
L + ++ + + ++ + G+S I +G + H FI
Sbjct: 544 LGKWESVEKVRELMDEKFIRKERGISWIDVGNKTHSFI 581
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/614 (28%), Positives = 295/614 (48%), Gaps = 38/614 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEM-PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + Y KCG ++ AR +FD+M RD SW AM +NG +L L +M G+
Sbjct: 80 NSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGL 139
Query: 140 SANQITYANVLRSS-AEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDA 197
N T R+ +EL + G ++K GF G +V + +L+D + + + A
Sbjct: 140 RPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAA 199
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+R+FD + + +V W +++ RY+ AG + V +F ML + P ++ ++ + AC+ L
Sbjct: 200 QRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTEL 259
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S G Q+H V +++ D V L +MY K ER++
Sbjct: 260 GSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKM------------ERSM------- 300
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL-MRKTTKDIDQ 376
AR++F MP NV+SW A+++GY +S + + + +F M + +
Sbjct: 301 ---------EHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNH 351
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T +L CA LS+ G+++H + + + V NAL+ MY + G + AR F Q
Sbjct: 352 ITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQ 411
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQG 496
+ + N + + A S + S FTF +LL+A A++ L +G
Sbjct: 412 LYET------NILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKG 465
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+++H ++ + + +LV +Y +C LE A R F E +VI S+I G +
Sbjct: 466 QKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKH 525
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
++AL +F M G+KP+ +T+ +L AC H G VK + F SM+ +G++P++EH
Sbjct: 526 GYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEH 585
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y C++ L R G ++E F+N MP + + + CR G +GE AA + L
Sbjct: 586 YACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLE 645
Query: 677 PWAPFQFKITTNRF 690
P P + + +N +
Sbjct: 646 PRDPAPYVLLSNLY 659
>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/598 (27%), Positives = 279/598 (46%), Gaps = 33/598 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y + + +DA LF M D SW ++ + Q G L ++++M + VS+N+
Sbjct: 162 IDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNE 221
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+ +L +S+ + L K +H + G N++L+++LV+ Y +C + DA ++
Sbjct: 222 FTFVRLLAASSF-IGLQYGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKL 280
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ + W I+ +EAV F KM + NFT+ + L C + S G
Sbjct: 281 TPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLG 340
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QIH +I+ E D V +L +MY+KC S
Sbjct: 341 RQIHSRVIRTGLEDDVPVGNALVDMYMKC------------------------------S 370
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ +F + NVISW +++AG+ +++L+ MR + TL ++L
Sbjct: 371 CIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVL 430
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
VC+ + ++HG I + ++ V NAL+D Y G + A M+QR D
Sbjct: 431 RVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQR-DS 489
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
+++ ++ T + G E A++ S M + + F+ +A A++ +E GKQ+HC+
Sbjct: 490 ITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCY 549
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ + L+++Y K + A R F E + DV+ N +I G N A
Sbjct: 550 SLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSA 609
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L F M+ GI+PD ITF +L C H G V + LQ+F SMR + + PQ +HY C++
Sbjct: 610 LSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVD 669
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ R G ++E + + MP P + + + C + LGE ARR ELNP P
Sbjct: 670 ILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDP 727
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/596 (26%), Positives = 266/596 (44%), Gaps = 45/596 (7%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KC +++ AR FDEMP RD SW +L A+ +N L++F M SG N T+++
Sbjct: 66 KCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSS 125
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+LRS + K++H +K GF N IL SSL+D Y + DA ++F + + +
Sbjct: 126 ILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGD 185
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
VSW ++ + AG A+ ++ +ML + FTF L A SF+ Y G IH
Sbjct: 186 TVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQY-GKLIHA 244
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I + + + V+ +L MY +C R I +
Sbjct: 245 HAIVLGVKLNLVLKTALVNMYSRCQR-------------------------------IED 273
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A ++ PE +VI W A+++G +++ ++EA+ M + T +L+VC
Sbjct: 274 AIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCIS 333
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
+ + +G+++H + R ++ V NAL+DMY KC + + ++ + + +SW +
Sbjct: 334 ILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTS 393
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ G+A G ++++ F EM+ +P+ FT +L C+ I S Q ++H +I+
Sbjct: 394 LIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTK 453
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +VV ALV+ Y ++ A RV K+ + D I S+ AL V
Sbjct: 454 ADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVIS 513
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLA-LQFFDSMRC---KYGIIPQLEHYECMIKL 623
M +K D G L C + L ++ + C K G+ L +I L
Sbjct: 514 HMFNADVKID-----GFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDL 568
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGY--ATLGEWAARRLNELNP 677
Y +YG + E + P V + NG+ + L + RL + P
Sbjct: 569 YGKYGLVHEARRAFTEIT-EPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQP 623
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 34/345 (9%)
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S EG+ IH IIK+ + + +L +Y KC +E AR D+ R+++SWT I
Sbjct: 32 LKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGI 91
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+S + + R EA ++F+ M +L+G + A F ++R
Sbjct: 92 LSAHIKNERHEEALDIFDFM----------VLSGP-----YPNAFTFSSILRS------- 129
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
C L + GK +H ++ + SN + ++L+D+Y + + A F
Sbjct: 130 ---------CFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSY 180
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
M D VSW V+ + G+ A+ + EM + + ++FTF LLAA + I L+
Sbjct: 181 MDS-GDTVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFI-GLQY 238
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK IH I ++N+V + ALV +Y++C +E AI+V K + DVI+ ++I G
Sbjct: 239 GKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQ 298
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
N + +EA+ F M+ G+ + T+ +L CI ++ L Q
Sbjct: 299 NMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQI 343
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 200/489 (40%), Gaps = 80/489 (16%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL-DDARGLFDEM 103
Y + +C S ++ R++ S ++ V + N ++ Y KC + + +F +
Sbjct: 324 YLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGI 383
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
+ SW +++ + ++GF +L LF++M GV N T + VLR + +
Sbjct: 384 KSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTL 443
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+LHG I+K +V++ ++LVDAY + DA R+ D+ ++++++ + R G
Sbjct: 444 KLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMG 503
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ A+ + M D++ F+ A + L G Q+H +K V
Sbjct: 504 YHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVAN 563
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L ++Y K G + +AR + E +++SW ++SG A +G I A F++M R +
Sbjct: 564 GLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGI-- 621
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
D +T L+L+ C+ HG
Sbjct: 622 -----------------------------QPDSITFLLVLSTCS-----------HG--- 638
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD----KVSWNAVLTGYARRGQS 459
L+DM + +F+ M + D + ++ R G+
Sbjct: 639 ------------GLVDMGLQ---------YFHSMREMHDVEPQSDHYVCLVDILGRAGRL 677
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG--- 516
EEAM M E P ++TLLAAC+ ++ G+ V R E+N +
Sbjct: 678 EEAMNIIETMPLE--PDASIYKTLLAACSIHRNMNLGED----VARRGLELNPLDPAFHL 731
Query: 517 ALVEVYTKC 525
LV++Y C
Sbjct: 732 LLVKLYDDC 740
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 6/274 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P S++L + + ++C++ K+ + KL +++ V + N ++ Y G +DDA
Sbjct: 420 QPNSFTL-SIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAW 478
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ +M +RD ++ ++ Q G+ L + M ++ V + + +SA
Sbjct: 479 RVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLG 538
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ KQLH +K G + + + L+D YGK ++ +ARR F +I + VSWN ++
Sbjct: 539 RIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLIS 598
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFE 276
G+ A+ F M I+P + TF L CS G+Q H + D E
Sbjct: 599 GLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVE 658
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLD----QPD 306
L ++ + GRLE+A +++ +PD
Sbjct: 659 PQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPD 692
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 3/207 (1%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
++++C L +K G +H I + +++++N LL +Y KC ++ AR +F +M R
Sbjct: 26 VVSLC-NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPC-R 83
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
D VSW +L+ + + + EEA+ F M P+ FTF ++L +C + GK+IH
Sbjct: 84 DVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIH 143
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
I++ +E N + +L+++Y++ E A ++F S D + ++I +
Sbjct: 144 ASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCS 203
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLA 587
AL ++ M + + + TF +L A
Sbjct: 204 HALRIYMEMLEAQVSSNEFTFVRLLAA 230
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
N+ SL++G IH +I+ + ++ L+ +Y+KC +E+A + F E DV+
Sbjct: 31 NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTG 90
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
++ NER EAL++F M G P+ TF IL +C G+ + S K+
Sbjct: 91 ILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHAS-SIKH 149
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
G +I LY R+ ++ + M TV
Sbjct: 150 GFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTV 187
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/566 (28%), Positives = 275/566 (48%), Gaps = 72/566 (12%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAY---GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
Q+H + G + S L+ + G + +R +F I N WN ++R Y
Sbjct: 27 QIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYS 86
Query: 221 VAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ N +EA+V++ M+ + I P N FTF L +C+ LSS G ++H IIK FE D
Sbjct: 87 RSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDL 146
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V +L +Y ++ G + AR LF+E R
Sbjct: 147 FVRNALIHLY-------------------------------SVFGNLNLARTLFDESLVR 175
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+++S+N M+ GY + AL M+ + D+ T + +VC+ L+E +GK++H
Sbjct: 176 DLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIH 235
Query: 400 GFIHRNDYS--SNIFVSNALLDMYRKCGNL-------------RSARIW----------- 433
+++N S SNI + +A++DMY KCG + +SA W
Sbjct: 236 AQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCG 295
Query: 434 -------FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLA 485
+ RD +SW A+++GY++ GQ EA+ F EM+ +P + T +L+
Sbjct: 296 EINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLS 355
Query: 486 ACANISSLEQGKQI-HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLD 542
ACA + + + GK++ H ++ + N + A++++Y KC ++ A+ +F+ +
Sbjct: 356 ACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKT 415
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+ NSMI G + G A+ VF + G+KPD +TF G+L AC H G ++ + F+
Sbjct: 416 GFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFE 475
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
SM YGI PQ+EHY CM+ L RYG ++E D V +MPF + R + CR +G
Sbjct: 476 SMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNV 535
Query: 663 TLGEWAARRLNELNPWAPFQFKITTN 688
+GE A ++L E+ ++ + +N
Sbjct: 536 KIGEIAGQKLLEMEAQHGARYVLLSN 561
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/559 (27%), Positives = 269/559 (48%), Gaps = 47/559 (8%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN---LDDARGLFDEMPERD 107
L S K+ + ++ + + +F ++R I + G+ LD +R LF ++ +
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPN 74
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQLH 166
WN M+ Y+++ P + L++ M G++ N T+ +L S A L ++H
Sbjct: 75 LFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVH 134
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I+K GF ++ + ++L+ Y + AR +FD+ ++ VS+N +++ Y +
Sbjct: 135 SHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPE 194
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL--GS 284
A+ +F +M I P FTF CS L+ P G QIH + K D +L +
Sbjct: 195 SALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSA 254
Query: 285 LTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+ +MY KCG + A R ++ +W+S+V GYA G I AR+LFN M ER+VIS
Sbjct: 255 IVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVIS 314
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV-HGFI 402
W AM++GY+++ EAL+ M D+VTL +L+ CA L +GK + H +I
Sbjct: 315 WTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYI 374
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYARRGQSEE 461
++ N ++ A++DMY KCG++ SA F ++ + + +N+++ G A+ G E
Sbjct: 375 ENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGET 434
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GAL 518
A+T F E+ +P + TF +L AC + +E+GK++ + N Y I G +
Sbjct: 435 AITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF-NAYGIKPQMEHYGCM 493
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
V++ + CLE E + L++K + +
Sbjct: 494 VDLLGRYGCLE----------------------------------EAYDLVQKMPFEANS 519
Query: 579 ITFHGILLACIHEGNVKLA 597
+ + +L AC GNVK+
Sbjct: 520 VIWRALLSACRTHGNVKIG 538
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 212/497 (42%), Gaps = 21/497 (4%)
Query: 17 SPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPP 76
S P + + +S K P + + L CA ++ ++ S+++
Sbjct: 86 SRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESD 145
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N I Y GNL+ AR LFDE RD S+N M+ Y + P L LF +M +
Sbjct: 146 LFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQN 205
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVK--RGFCGNVILESSLVDAYGKCMVM 194
SG+ ++ T+ + + E V KQ+H + K R N++L+S++VD Y KC ++
Sbjct: 206 SGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLI 265
Query: 195 TDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
A R+F + +K+A +W+ +V Y G A +F M D+ ++ +
Sbjct: 266 NIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDV----ISWTAMISG 321
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
S E +++ + + + D+V L ++ + G + + L Q E + +
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 381
Query: 314 TSIVSG-----YAISGRIREARELFNEMPE--RNVISWNAMLAGYTRSLLWKEALDFVFL 366
+I++ YA G I A E+F + + + +N+M+AG + L + A+
Sbjct: 382 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 441
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV-HGFIHRNDYSSNIFVSNALLDMYRKCG 425
+ T D+VT +L C I+ GK++ + + ++D+ + G
Sbjct: 442 LISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYG 501
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTFET 482
L A +M + V W A+L+ G E A EM+ +
Sbjct: 502 CLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSN 561
Query: 483 LLAACANISSLEQGKQI 499
+L A+ + E+ +Q+
Sbjct: 562 IL---ADANQWEEARQV 575
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 19/290 (6%)
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN---LRSARIWFYQMSQRRDKVSWNAV 449
K G ++H N IF + L+ + G+ L +R+ F Q+ + WN +
Sbjct: 23 KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCP-NLFMWNTM 81
Query: 450 LTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+ GY+R EA+ + M + P+ FTF LL +CA +SSLE G ++H +I++
Sbjct: 82 IRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHG 141
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+E ++ R AL+ +Y+ L A +F ES D++ N+MI G+ + AL +FG
Sbjct: 142 FESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFG 201
Query: 568 LMKKEGIKPDHITFHGILLAC--IHEGNV--KLALQFFDSMRCKYGIIPQLEHYECMIKL 623
M+ GI PD TF + C ++E NV ++ Q + ++R I + ++ +
Sbjct: 202 EMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLR---SIDSNILLKSAIVDM 258
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW-AARRL 672
Y + G + E + M + + + C GYA GE AR+L
Sbjct: 259 YAKCGLINIAERVFSTMGTSKSAAAWSSMV--C---GYARCGEINVARKL 303
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 279/579 (48%), Gaps = 68/579 (11%)
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG-KCMVMTDARRMFDDIQNKNA 209
R S + SK+LH +++ + L S ++ +Y + A +F+ I+
Sbjct: 22 RVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTL 81
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
V WN ++R + + EA+ M+ +M + I N T AC+ +S G +IH
Sbjct: 82 VVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVH 141
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+K+ FE V +L MY CG+L G+A
Sbjct: 142 ALKLGFESYLFVSNALIHMYAMCGQL-----------------------GFA-------- 170
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+++F+ M +R+++SWN ++ GY++ +KE L M D VT+ I+ C+ L
Sbjct: 171 QKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHL 230
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY---------------------------- 421
+ + + +I N+ ++++ N L+DMY
Sbjct: 231 GDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALV 290
Query: 422 ---RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSK 477
K GNL +AR F M +RD +SW +++TGY++ Q +A+ F EM + +P K
Sbjct: 291 MGHAKVGNLTAARKLFDNMP-KRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDK 349
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T ++L+ACA++ L+ G +H ++ R+ + ++ +L+++Y KC +E A+ VF
Sbjct: 350 VTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHR 409
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
D + S+I G N AL++F M +EG++P H TF GILLAC H G V
Sbjct: 410 MKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKG 469
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
L++F+SM +G++P ++HY C++ L R G + + +F+ +MP P V + R + C+
Sbjct: 470 LEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACK 529
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF---DRY 693
+G L E A +RL EL+P + + +N + DR+
Sbjct: 530 LHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRW 568
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/540 (27%), Positives = 273/540 (50%), Gaps = 38/540 (7%)
Query: 61 ARKLESNLV-TFYPTPPVFLLNRAIECYG-KCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
+++L ++L+ T T P FL++ I Y NL A +F+++ WN M+
Sbjct: 33 SKELHAHLIRTQLHTDP-FLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGL 91
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+Q+ P + ++ M+H G++ N +T + ++ A ++ +++H +K GF +
Sbjct: 92 SQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYL 151
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++L+ Y C + A++MFD + +++ VSWN ++ Y KE + +F M
Sbjct: 152 FVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAA 211
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
+I+ T + ACS L + I + + E D + +L +MY + E A
Sbjct: 212 NIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELA 271
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+G+ D+ ERNI+SW ++V G+A G + AR+LF+ MP+R+VISW +M+ GY+++ +
Sbjct: 272 QGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFS 331
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
+A+ M D+VT+ +L+ CA L ++ +G VH +I R+ ++I+V N+L+
Sbjct: 332 DAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLI 391
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
DMY KCG + A F++M + +D VSW +V++G A G + A+ FS+M E +P+
Sbjct: 392 DMYCKCGMVEKALEVFHRM-KDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTH 450
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
TF +L ACA+ + +G + Y ++ LV C+ + +
Sbjct: 451 GTFVGILLACAHAGLVNKGLE---------YFESMESVHGLVPAMKHYGCV---VDLLSR 498
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
S ++D + + +KK I PD + + +L AC GNV LA
Sbjct: 499 SGNID---------------------KAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLA 537
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 31/325 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF+ CA IV RK+ + + +F+ N I Y CG L A+ +FD M +RD
Sbjct: 122 LFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 181
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN ++ Y+Q L LF M + + A+ +T ++ + + + + +
Sbjct: 182 LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVK 241
Query: 168 LIVKRGFCGNVILESSLVDAYGK-----------------------CMVM--------TD 196
I + +V L ++L+D YG+ +VM T
Sbjct: 242 YIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTA 301
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++FD++ ++ +SW ++ Y A +AV +F +M+ ++P T A+ L AC+
Sbjct: 302 ARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAH 361
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G +H I + + D V SL +MY KCG +E A + + +++ +SWTS+
Sbjct: 362 LGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSV 421
Query: 317 VSGYAISGRIREARELFNEMPERNV 341
+SG A++G A +LF++M V
Sbjct: 422 ISGLAVNGFANSALDLFSQMLREGV 446
>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
Length = 571
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/570 (29%), Positives = 273/570 (47%), Gaps = 44/570 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W AM+ Y ++G R ++ F +M + V ++ITY VL + ++LE G +++H I
Sbjct: 4 WTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVL-GAIQDLEQG--RRIHVRIQ 60
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ G+ ++++ ++L+ Y C + DA R+F+ + +++ VSW I+ AG+ A+
Sbjct: 61 ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMG 120
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F +M + RP T L C P EG IH D V ++ MY
Sbjct: 121 LFRRMQLQGTRPNRITLLELLAWCD---DPDEGAAIHERAFASGLRSDVPVCNAILNMYA 177
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
K +GR A ELF MP RN +SW AM+A
Sbjct: 178 K-------------------------------AGRFETASELFERMPVRNAVSWTAMMAA 206
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
R+ +AL M + D + ++N C S + +HG I R S+
Sbjct: 207 MVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINAC---SSAATARWIHGCIIRGGCDSD 263
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
VSNA++ Y +CG+L+ A F ++ +RRD VSW +++ +A G+ + + F EM
Sbjct: 264 TAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREML 323
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIH-CFVIRNCYEINVVCRGALVEVYTKCCCL 528
E R ++ T T++ ACA S++++G+ IH C + + + AL+++Y KC L
Sbjct: 324 LEGVRANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSL 383
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
E A R+F E DV+ S+I N G A +F M+ EG++P +TF ++ AC
Sbjct: 384 EVAARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAAC 443
Query: 589 IHEGNVKLALQFFDSMRCKY--GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
H G V L +F +R + GI LEH C++ L R G ++E E ++ MPF PT
Sbjct: 444 SHAGLVDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTP 503
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ C+ + G+ AA ++ L+
Sbjct: 504 AVWMAFLAGCKAYEDISRGQRAAAQILGLD 533
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 214/441 (48%), Gaps = 49/441 (11%)
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTL 128
T Y T V + N ++ Y C +L DA +F+ M RD SW +++ A + G FP +
Sbjct: 62 TGYDTDLV-VANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA-AM 119
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
LF M G N+IT +L + E +H G +V + +++++ Y
Sbjct: 120 GLFRRMQLQGTRPNRITLLELLAWCDDPDE---GAAIHERAFASGLRSDVPVCNAILNMY 176
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
K A +F+ + +NAVSW ++ + AG +A+ +F M + + P + F
Sbjct: 177 AKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFI 236
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDE 307
+ AC SS IHG II+ + D V ++ Y +CG L++A R ++ +
Sbjct: 237 TVINAC---SSAATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKER 293
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
R+ +SWT+++S +A GRI+ +LF EM +L G
Sbjct: 294 RDHVSWTTMISAFAEFGRIKRCVQLFREM----------LLEGVR--------------- 328
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI--HRNDYSSNIFVSNALLDMYRKCG 425
++VTL ++N CAG S IK G+ +H + ++ + SS++ V+ ALLDMY KCG
Sbjct: 329 ------ANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSM-VATALLDMYGKCG 381
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+L A F ++ Q D VSW +++ A+ G A F MQ E RP TF +++
Sbjct: 382 SLEVAARIFGELEQ-PDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVV 440
Query: 485 AACANISSLEQGKQIHCFVIR 505
AAC++ ++ GK+ FV R
Sbjct: 441 AACSHAGLVDLGKE---FVTR 458
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 168/343 (48%), Gaps = 23/343 (6%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
A + R S L + P + N + Y K G + A LF+ MP R+ SW AM+
Sbjct: 151 AAIHERAFASGLRSDVP-----VCNAILNMYAKAGRFETASELFERMPVRNAVSWTAMMA 205
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
A + G L LF DM GV + I + V+ + + ++ +HG I++ G
Sbjct: 206 AMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINACSSA---ATARWIHGCIIRGGCDS 262
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+ + ++++ AY +C + +A R F +I + ++ VSW ++ + G K V +F +M
Sbjct: 263 DTAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREM 322
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVVLGSLTEMYVKCGR 294
L E +R T + AC+ S+ EG IH +I E +V +L +MY KCG
Sbjct: 323 LLEGVRANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGS 382
Query: 295 LEDAR---GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAM 347
LE A G L+QPD ++SWTSI++ A +G A LF M V +++ ++
Sbjct: 383 LEVAARIFGELEQPD---VVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSV 439
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL---GLILNVCA 387
+A + + L +FV +RK ++ ++TL G I+++ A
Sbjct: 440 VAACSHAGLVDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLA 482
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 181/644 (28%), Positives = 308/644 (47%), Gaps = 39/644 (6%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C I+ +L + + F V N I +G CG++++A +F+EM ERD SW
Sbjct: 170 CGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISW 229
Query: 112 NAMLGAYTQNGFPGRTLELF--LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
N+++ A QN + F + + H ++ ++ + S + L+ G K +HGL
Sbjct: 230 NSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG--KGVHGLA 287
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK G N+ L ++L+ Y DA +F + ++ +SWN ++ Y+ G A+
Sbjct: 288 VKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCAL 347
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F +ML TF +AL AC G +HG ++ + + + ++ +L Y
Sbjct: 348 KVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFY 407
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KC ++ EA+++F MP+ + ++WNA++
Sbjct: 408 GKCHKMA-------------------------------EAKKVFQRMPKLDKVTWNALIG 436
Query: 350 GYTRSLLWKEALDFVFLMRK-TTKDIDQVTLGLILNVCAGLSE-IKMGKEVHGFIHRNDY 407
G+ + EA+ LMR+ +T +D +T+ IL C + IK G +H +
Sbjct: 437 GFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGF 496
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ V ++L+ MY KCG+L S+ F Q+ + V WNA++ AR G EEA+
Sbjct: 497 DLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAIIAANARYGFGEEALKLVV 555
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ +F F T L+ A+++ LE+G+Q+H I+ +E++ A +++Y KC
Sbjct: 556 RMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCG 615
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
L+ A+R+ + + + N++I + + +A E F M K G+KP+H++F +L
Sbjct: 616 ELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H G V L ++ SM YGI P +EH CMI L R G + E E F+ MP P
Sbjct: 676 ACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPND 735
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ R + CR LG AA+ L EL+P + + +N F
Sbjct: 736 LVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVF 779
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 248/516 (48%), Gaps = 36/516 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y K G ++ A+ +FD M ER+ SWN M+ Y + G + F D+ G+ +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 147 ANVLRSSAEELELGVSK-QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
A+++ + + + Q HG +K G +V + +S V Y ++++A++MF+++
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++N VSW ++ Y G+ KE + + +M E I A + +C FL G Q
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+ G +K E SL M+ CG + +A + ++ +ER+ ISW SI+S A
Sbjct: 182 LLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANA---- 237
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
++ L +E+ + MR ++I+ TL ++L++
Sbjct: 238 ---------------------------QNTLHEESFRYFHWMRLVHEEINYTTLSILLSI 270
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C + +K GK VHG + SNI + N LL +Y G + A + F +M + RD +S
Sbjct: 271 CGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPE-RDLIS 329
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFVI 504
WN++L Y + G+ A+ F+EM W + + TF + LAAC + GK +H FV+
Sbjct: 330 WNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVV 389
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ L+ Y KC + A +VF+ LD + N++I GF +N EA+
Sbjct: 390 VLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVA 449
Query: 565 VFGLMKKEGIKP-DHITFHGILLACI-HEGNVKLAL 598
F LM++ D+IT IL +C+ HE +K +
Sbjct: 450 AFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGI 485
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/584 (26%), Positives = 261/584 (44%), Gaps = 64/584 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + Y G + +A+ +F+EMP+R+ SW +++ +Y+ NG + + M H
Sbjct: 94 VFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRH 153
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G+ N+ A V+ S +++ + QL G +K G V +SL+ +G C + +
Sbjct: 154 EGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINE 213
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA-CS 255
A +F+++ ++ +SWN I+ E +F +R +N+T + L + C
Sbjct: 214 ACSIFNEMNERDTISWNSIISAN-AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICG 272
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G +HG+ +K E + + +L +Y GR +DA + + ER++ISW S
Sbjct: 273 SVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNS 332
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++ Y GR A ++F EM LW + K+I+
Sbjct: 333 MLACYVQDGRCLCALKVFAEM-------------------LWMK------------KEIN 361
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT L C GK +HGF+ + + N L+ Y KC + A+ F
Sbjct: 362 YVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQ 421
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET---LLAACANISS 492
+M + DKV+WNA++ G+A + EA+ +F M+ E S + T +L +C
Sbjct: 422 RMP-KLDKVTWNALIGGFANNAELNEAVAAFKLMR-EGSTSGVDYITIVNILGSCLTHED 479
Query: 493 L-EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE-----YAIRVFKESSSLDVIIC 546
L + G IH + ++++ + +L+ +Y KC L + VFK SS + II
Sbjct: 480 LIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIA 539
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVKLALQFF 601
+ GF G EAL++ M+ GI+ D F L LA + EG Q
Sbjct: 540 ANARYGF-----GEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEG------QQL 588
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
K G +L+H+ + YG EL+D + +P PT
Sbjct: 589 HGSTIKLGF--ELDHFIINAAMD-MYGKCGELDDALRILP-QPT 628
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 213/462 (46%), Gaps = 47/462 (10%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K + A+ +FD + +N SWN ++ Y+ G+ EAV+ F + I+P F
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 248 ANALFACSFLS-SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
A+ + AC+ S EG Q HG IK CG + D
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIK-------------------CGLIYD--------- 93
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ TS V YA G + A+++FNEMP+RNV+SW +++ Y+ + KE ++
Sbjct: 94 ---VFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKR 150
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MR ++ + L+++ C L +I +G ++ G + + + +N+L+ M+ CG+
Sbjct: 151 MRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGD 210
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLA 485
+ A F +M++ RD +SWN++++ A+ EE+ F M+ + T LL+
Sbjct: 211 INEACSIFNEMNE-RDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLS 269
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
C ++ L+ GK +H ++ E N+ L+ VY+ + A +F+ D+I
Sbjct: 270 ICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLIS 329
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
NSM+ + + R AL+VF M + +++TF L AC L +FF + +
Sbjct: 330 WNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAAC-------LDPEFFTNGK 382
Query: 606 CKYGIIPQLEHYE------CMIKLYCRYGYMKELEDFVNRMP 641
+G + L + +I Y + M E + RMP
Sbjct: 383 ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMP 424
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 162/333 (48%), Gaps = 8/333 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+ ++Y + C + + L +V + + N I YGKC + +A+
Sbjct: 358 KEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRS--SA 154
+F MP+ D +WNA++G + N + F M S + IT N+L S +
Sbjct: 418 KVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTH 477
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E+L + +H V GF + ++SSL+ Y KC + + +FD + K + WN
Sbjct: 478 EDL-IKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNA 536
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ G G+EA+ + +M I F F+ AL + L+ EG Q+HG IK+
Sbjct: 537 IIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLG 596
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
FE D ++ + +MY KCG L+DA +L QP +R+ +SW +++S A G+ +A+E F+
Sbjct: 597 FELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFH 656
Query: 335 EMPERNV----ISWNAMLAGYTRSLLWKEALDF 363
+M + V +S+ +L+ + L E L +
Sbjct: 657 DMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAY 689
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 144/356 (40%), Gaps = 35/356 (9%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY K GR+ A+ + D+ ERN SW ++SGY G EA F ++ + M
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI-KMGKEVHGFIHRND 406
+A ++ C S + K G + HGF +
Sbjct: 61 IAS-------------------------------LVTACNKSSIMAKEGFQFHGFAIKCG 89
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
++FV + + Y G + +A+ F +M R+ VSW +++ Y+ G +E + ++
Sbjct: 90 LIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPD-RNVVSWTSLMVSYSDNGSKKEVINTY 148
Query: 467 SEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
M+ E ++ ++++C + + G Q+ ++ E V +L+ ++ C
Sbjct: 149 KRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGC 208
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
+ A +F E + D I NS+I N E+ F M+ + ++ T +L
Sbjct: 209 GDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILL 268
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
C +K + + KYG+ + ++ +Y G K+ E RMP
Sbjct: 269 SICGSVDYLKWG-KGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMP 323
>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
Length = 947
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/622 (28%), Positives = 300/622 (48%), Gaps = 47/622 (7%)
Query: 27 TKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC 86
+ + H + P +Y+L + C A+ +++ + V F+ N I
Sbjct: 17 VEDLEQHQRDANPSTYAL---MLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINM 73
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
YGKCG L++AR + D M + + SW ML AY QNG LE F M GV AN++T
Sbjct: 74 YGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTI 133
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ L + H I + GF +V+++++LV YG+C + AR +FD+I
Sbjct: 134 ISALGCCK---SFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEIC 190
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
NK+ VSW ++ ++ G+ A+V F+ M + ++P TF L A +
Sbjct: 191 NKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEE 250
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IH II+ E DD +L L Y KCG +E + ++ DE+N++SW+ ++ ++ +G
Sbjct: 251 IHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGY 310
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
EA +M V + ++VT IL+
Sbjct: 311 FWEAIRQLQKMDLEGVQA-------------------------------NEVTFVSILDA 339
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
EI+ G+ + I + Y SN+ V N+L++MY KC +L +A+ F+ M +R++++S
Sbjct: 340 SV-WEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEIS 398
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W++++ YA+ Q+ EAM F M E +P + T ++L AC ++ + +Q QIH V+
Sbjct: 399 WSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVL 458
Query: 505 RNCYEINVVCRG---ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
E +VV AL+ +Y +C LE A +VF D I NS++ + + G+E
Sbjct: 459 EAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKE 518
Query: 562 ALEVFGLMKKEG---IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
AL++F M EG +KP+ +TF + AC + ++ + F + G+ +
Sbjct: 519 ALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGI-VFHRRAAEVGMDSNVVVAN 577
Query: 619 CMIKLYCRYGYMKELEDFVNRM 640
+IK+Y + ++E NR+
Sbjct: 578 SLIKMYGKCKRLEEAMSVFNRI 599
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 294/593 (49%), Gaps = 41/593 (6%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG-SWNAMLG 116
I E L S ++ V + N + YGKC +L +A+ +F M ER SW++++
Sbjct: 345 IEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVA 404
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
AY QN ++LF M+ G+ +++T +VL + + S Q+H +++ G
Sbjct: 405 AYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLER 464
Query: 177 NVILE---SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+V++ ++L++ Y +C + DAR++F + K+A+ WN ++ Y +G+GKEA+ +F
Sbjct: 465 DVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFR 524
Query: 234 KMLRE---DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+M E ++P + TF + + AC+ G+ H ++ + + VV SL +MY
Sbjct: 525 EMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYG 584
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE-MPERNVISWNAMLA 349
KC RLE EA +FN + R+++SWNA+++
Sbjct: 585 KCKRLE-------------------------------EAMSVFNRILGIRDLVSWNALIS 613
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ ++ + AL+ + M + D++T +L+ CA L I G+E+H + S
Sbjct: 614 AFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFES 673
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
V L++MY +CGN A + F ++ Q+RD ++WNAV + G A+ M
Sbjct: 674 VDAVLGTLVNMYGRCGNAMEAELAFGKL-QQRDAIAWNAVAAAITQTGDQRRALGILRGM 732
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
E +P TF TLL CA+ ++L +GK H + + +++ AL+ +Y KC L
Sbjct: 733 DNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSL 792
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
A RVF + + N++I+ + N + A+ +F M EGI P+ ++F I AC
Sbjct: 793 REANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFAC 852
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
H G ++ ++F M +G++P EHY C + L R G + + E+ V M
Sbjct: 853 SHAGMLEEGSKYFQYMVADHGLVPTPEHYGCFVDLLGRTGRLADAEELVTGMA 905
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 14/294 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + CA+ +I E R++ +L + YG+CGN +A F ++
Sbjct: 643 FISVLDACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGNAMEAELAFGKLQ 702
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD +WNA+ A TQ G R L + M++ GV + +T+ +L + A+ L K
Sbjct: 703 QRDAIAWNAVAAAITQTGDQRRALGILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKI 762
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H ++ GF ++IL ++L++ YGKC + +A R+F + +N+VSWN ++ Y G+
Sbjct: 763 FHARAMELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGH 822
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
K A+ +F M E I P +F + FACS EG + HG++ +
Sbjct: 823 VKLAIGLFRDMDLEGIVPNQVSFLSIFFACSHAGMLEEGSKYFQYMVADHGLVPTPEH-- 880
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREAR 330
G ++ + GRL DA L+ ++ + W ++ + + +A+
Sbjct: 881 ----YGCFVDLLGRTGRLADAEELVTGMAEDARSLDWLILLGSSTLQENVEQAK 930
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 243/482 (50%), Gaps = 38/482 (7%)
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ N SWN ++ +G+ EA+ F M + ++P TF A+ +CS L + G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q H + FE D V +L +MY KCG L DAR L D+ RNI+SWTS+++GY +
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD------IDQV 377
A LF E FL+ ++ + +D +
Sbjct: 232 DDAHRALLLFKE-----------------------------FLVEESGSEGDGEVCVDPI 262
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+ +L+ C+ +SE + + VHGF+ + + ++ V N L+D Y KCG L +R F M
Sbjct: 263 AMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGM 322
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQ 495
++ RD +SWN+++ YA+ G S E+M F M E + T +L ACA+ S
Sbjct: 323 AE-RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 381
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK IH VI+ E NV +++++Y KC +E A + F +V ++M+ G+
Sbjct: 382 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM 441
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ +EALEVF M G+KP++ITF +L AC H G ++ +F +M ++ + P +E
Sbjct: 442 HGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVE 501
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R GY+KE D + M P + + CR + LGE +AR+L EL
Sbjct: 502 HYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFEL 561
Query: 676 NP 677
+P
Sbjct: 562 DP 563
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 240/519 (46%), Gaps = 83/519 (15%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
SWN+++ ++G L F M + N+ T+ ++S + L+L +Q H
Sbjct: 119 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 178
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+ GF ++ + S+LVD Y KC + DAR +FD+I ++N VSW ++ Y+ + A+
Sbjct: 179 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 238
Query: 230 VMFFKMLRED----------IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
++F + L E+ + P+ + L ACS +S +HG +IK FEGD
Sbjct: 239 LLFKEFLVEESGSEGDGEVCVDPI--AMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDL 296
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V +L + Y KCG L +R + D ER++ISW SI++ YA +G E+ E+F+ M +
Sbjct: 297 GVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKD 356
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
I++NA VTL +L CA ++GK +H
Sbjct: 357 GEINYNA------------------------------VTLSAVLLACAHSGSQRLGKCIH 386
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ + SN+FV +++DMY KCG + AR F +M ++ K SW+A++ GY G +
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK-SWSAMVAGYGMHGHA 445
Query: 460 EEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
+EA+ F EM +P+ TF ++LAAC++ LE+G
Sbjct: 446 KEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWH-------------------- 485
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ K E+ + E C +LG R E F L+K ++PD
Sbjct: 486 ---WFKAMSHEFDVEPGVEHYG-----CMVDLLG-----RAGYLKEAFDLIKGMKLRPDF 532
Query: 579 ITFHGILLACIHEGNVKL----ALQFF--DSMRCKYGII 611
+ + +L AC NV L A + F D C Y ++
Sbjct: 533 VVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVL 571
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 180/322 (55%), Gaps = 13/322 (4%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C++ + R+ + F P +F+ + ++ Y KCG L DAR LFDE+ R+ SW
Sbjct: 162 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 221
Query: 112 NAMLGAYTQNGFPGRTLELFLD--MNHSG------VSANQITYANVLRSSAEELELGVSK 163
+M+ Y QN R L LF + + SG V + I +VL + + E +++
Sbjct: 222 TSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITE 281
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+HG ++KRGF G++ +E++L+DAY KC + +RR+FD + ++ +SWN I+ Y G
Sbjct: 282 GVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNG 341
Query: 224 NGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
E++ +F +M+++ +I T + L AC+ S G IH +IK+ E + V
Sbjct: 342 MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG 401
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----E 338
S+ +MY KCG++E AR D+ E+N+ SW+++V+GY + G +EA E+F EM +
Sbjct: 402 TSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVK 461
Query: 339 RNVISWNAMLAGYTRSLLWKEA 360
N I++ ++LA + + L +E
Sbjct: 462 PNYITFVSVLAACSHAGLLEEG 483
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 173/349 (49%), Gaps = 32/349 (9%)
Query: 332 LFNEMPER-NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LFN+ ++ NV SWN+++A RS EAL MRK + ++ T + C+ L
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ G++ H + ++FVS+AL+DMY KCG LR AR F ++S R+ VSW +++
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISH-RNIVSWTSMI 225
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPSKFTFE---------TLLAACANISSLEQGKQIHC 501
TGY + + A+ F E E S+ E ++L+AC+ +S + +H
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
F+I+ +E ++ L++ Y KC L + RVF + DVI NS+I + N E
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345
Query: 562 ALEVFGLMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
++E+F M K+G I + +T +LLAC H G+ +L D + K G+ + +
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQV-IKMGLESNVFVGTSI 404
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I +YC+ G V M RK FD+ R+ + W+A
Sbjct: 405 IDMYCKCG----------------KVEMARKAFDRMREKNVKS---WSA 434
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 150/300 (50%), Gaps = 14/300 (4%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
N ++ Y KCG L +R +FD M ERD SWN+++ Y QNG ++E+F M G +
Sbjct: 300 NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 359
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ N +T + VL + A + K +H ++K G NV + +S++D Y KC + AR+
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 419
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
FD ++ KN SW+ +V Y + G+ KEA+ +F++M ++P TF + L ACS
Sbjct: 420 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 479
Query: 260 PYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA----RGLLDQPDERNIISWT 314
EG + + D E G + ++ + G L++A +G+ +PD + W
Sbjct: 480 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD---FVVWG 536
Query: 315 SIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+++ + + AR+LF E+ +N + + Y + W++ LM+ +
Sbjct: 537 ALLGACRMHKNVDLGEISARKLF-ELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNS 595
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKF 478
+ R+ N + F + + + SWN+V+ AR G S EA+ +FS M + +P++
Sbjct: 94 LRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRS 153
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF + +C+ + L G+Q H + +E ++ ALV++Y+KC L A +F E
Sbjct: 154 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 213
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFG--LMKKEGIKPD 577
S +++ SMI G+ N+ AL +F L+++ G + D
Sbjct: 214 SHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGD 254
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/564 (29%), Positives = 282/564 (50%), Gaps = 55/564 (9%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVK----------RGFCGNVILE-SSLVDAYGK 190
N ++ +L S E +L + LH +VK R + +V++ ++LV Y +
Sbjct: 10 NYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYAR 69
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFAN 249
C DA R+FD+++ ++AVSWN ++ AG+ A+ +F +MLR D R + TF
Sbjct: 70 CGRREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDRATFTT 126
Query: 250 ALFACS---FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
L C+ S P M +HG+++ FE + V +L Y +CG P
Sbjct: 127 VLSECARAGAASLPACAM-VHGLVVSCGFEAEVPVGNALVTAYFECG----------SP- 174
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
A +F+ M E+NVI+W AM++G R+ L+KE+
Sbjct: 175 --------------------ASAERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQ 214
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M +T D + T L CA + G++VHG + + + +++ V + L+D+Y KCG
Sbjct: 215 MIRTV-DANNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGL 273
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLA 485
+ A + ++ + D+V +L G+A+ G E+A F+EM + T T+L
Sbjct: 274 MEDA-LTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLG 332
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINV-VCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
A + GKQIH VI+ C+ +N VC G LV +Y+KC L +++VF E S + +
Sbjct: 333 AFGASAPFALGKQIHALVIKRCFGVNTYVCNG-LVNMYSKCGELRESVQVFDEMPSKNSV 391
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
NS+I F + G E ++F MK +G KP +TF +L AC H G+ K L+ +SM
Sbjct: 392 SWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSM 451
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
+YG++P++EHY C++ + R G + + + F+ PF + + + + C +G + +
Sbjct: 452 SSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEV 511
Query: 665 GEWAARRLNELNPWAPFQFKITTN 688
G+ AA +L L+P + + +N
Sbjct: 512 GKHAAEKLLLLDPSCTAAYVLLSN 535
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 40/423 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y +CG +DA +FDEM RD SWN+++ A G L LF M S
Sbjct: 61 NALVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRG---AGDALALFRRMLRSDAR 117
Query: 141 A-NQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
A ++ T+ VL + A L +HGL+V GF V + ++LV AY +C A
Sbjct: 118 ACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASA 177
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R+F + KN ++W ++ A KE+ +F +M+R + N T++ L AC+
Sbjct: 178 ERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMIR-TVDANNATYSCTLLACARS 236
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ EG Q+HG+++K FE D V L ++Y KCG +EDA + E + + T I+
Sbjct: 237 LAAREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVIL 296
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G+A +G +A ELF EM +ID+
Sbjct: 297 VGFAQNGLEEKAFELFAEMV-------------------------------GAGNEIDEN 325
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ +L + +GK++H + + + N +V N L++MY KCG LR + F +M
Sbjct: 326 TVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEM 385
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
++ VSWN+++ +AR G E F M+ + +P+ TF +LL AC+++ S ++G
Sbjct: 386 PS-KNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKG 444
Query: 497 KQI 499
+I
Sbjct: 445 LEI 447
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 43/412 (10%)
Query: 25 TLTKTISGHLKSD-EPVSYSLYAHLFQL--------------CASSKAIVEARKLESNLV 69
T T ISG +++ S+SL+ + + CA S A E +++ +V
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCTLLACARSLAAREGQQVHGLVV 250
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
+ + + ++ Y KCG ++DA +F E D +L + QNG + E
Sbjct: 251 KAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFE 310
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
LF +M +G ++ T + VL + + KQ+H L++KR F N + + LV+ Y
Sbjct: 311 LFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYS 370
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + ++ ++FD++ +KN+VSWN I+ + G+G E +F M + +P + TF +
Sbjct: 371 KCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLS 430
Query: 250 ALFACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
L ACS + S +G++I +GV+ +++ + +M + G L+DA+ +
Sbjct: 431 LLHACSHVGSAKKGLEILNSMSSQYGVLPRMEH------YACVVDMLGRAGLLDDAKSFI 484
Query: 303 -DQPDERNIISWTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWK 358
D P + + W +++ + G + A E + ++ + Y+ W
Sbjct: 485 EDGPFTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWD 544
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
D +M++ ++ +GL + G S I++ KEVH F+ R+ N
Sbjct: 545 ---DRAKVMKRMSE------MGLRKDT--GKSWIELEKEVHSFVVRSTSHPN 585
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 252/514 (49%), Gaps = 67/514 (13%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A R+F+ I + + +N++++ ++ G+ + A+ +F ++ + P N+T+ L
Sbjct: 61 ANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGC 120
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG +IH ++K E D V SL +MY + G +
Sbjct: 121 IGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELG----------------------L 158
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR-KTTKDID 375
V G+ ++F EMPER+ +SWN M++GY R ++EA+D M+ ++ + +
Sbjct: 159 VEGFT---------QVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPN 209
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF- 434
+ T+ L+ CA L +++GKE+H +I N+ + NALLDMY KCG + AR F
Sbjct: 210 EATVVSTLSACAVLRNLELGKEIHDYI-ANELDLTPIMGNALLDMYCKCGCVSVAREIFD 268
Query: 435 -----------------------------YQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
++ S RD V W A++ GY + E+A+
Sbjct: 269 AMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIAL 328
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ P KF TLL CA + +LEQGK IH ++ N +++ V AL+E+Y K
Sbjct: 329 FGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAK 388
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C C+E ++ +F +D S+I G N + EALE+F M+ G+KPD ITF +
Sbjct: 389 CGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAV 448
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V+ + F SM Y I P LEHY C I L R G ++E E+ V ++P
Sbjct: 449 LSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQN 508
Query: 645 T---VPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
VP+ + CR G +GE A L ++
Sbjct: 509 NEIIVPLYGALLSACRTYGNIDMGERLATALAKV 542
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 236/453 (52%), Gaps = 6/453 (1%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNR--AIECYGKCGNLDDARGLFDEMPERDG 108
L S K++ + +++++++ F +LN+ A G+ + A +F+ +
Sbjct: 14 LLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSL 73
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+N M+ A+ + G + LF + GV + TY VL+ E+ +++H
Sbjct: 74 FIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAF 133
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+VK G + + +SL+D Y + ++ ++F+++ ++AVSWN+++ Y+ +EA
Sbjct: 134 VVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRFEEA 193
Query: 229 VVMFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
V ++ +M + + +P T + L AC+ L + G +IH I + + ++ +L +
Sbjct: 194 VDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIAN-ELDLTPIMGNALLD 252
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + AR + D +N+ WTS+V+GY I G++ +AR LF P R+V+ W AM
Sbjct: 253 MYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAM 312
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ GY + +++A+ M+ + D+ + +L CA L ++ GK +H +I N
Sbjct: 313 INGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRI 372
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ VS AL++MY KCG + + F + + D SW +++ G A G++ EA+ F
Sbjct: 373 KMDAVVSTALIEMYAKCGCIEKSLEIFNGL-KDMDTTSWTSIICGLAMNGKTSEALELFE 431
Query: 468 EMQW-ETRPSKFTFETLLAACANISSLEQGKQI 499
MQ +P TF +L+AC + +E+G+++
Sbjct: 432 AMQTCGLKPDDITFVAVLSACGHAGLVEEGRKL 464
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y CG LD AR LF+ P RD W AM+ Y Q + LF +M GV ++
Sbjct: 285 YVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIV 344
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+L A+ L K +H I + + ++ ++L++ Y KC + + +F+ +++
Sbjct: 345 VTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKD 404
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+ SW I+ + G EA+ +F M ++P + TF L AC EG ++
Sbjct: 405 MDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKL 464
Query: 267 -HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNII 311
H + E + G ++ + G L++A L+ + PD+ N I
Sbjct: 465 FHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEI 511
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Query: 477 KFTFETLLAACANISSLEQGK-QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
K T+ +LL +C ++S L+Q + I CF ++ + +++ + + + YA R+F
Sbjct: 8 KGTYISLLKSCKSMSQLKQIQAHIFCFGLQQ--DRDILNKLMAFSMDSSLGDFNYANRIF 65
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL--LACIHEGN 593
+ I N MI F R A+ +F +++ G+ PD+ T+ +L + CI E
Sbjct: 66 NHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVR 125
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYEC--MIKLYCRYGYMKELEDFVNRMP 641
+ F K G+ + + Y C ++ +Y G ++ MP
Sbjct: 126 EGEKIHAF---VVKTGL--EFDPYVCNSLMDMYAELGLVEGFTQVFEEMP 170
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 268/532 (50%), Gaps = 34/532 (6%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N I ++L+ + K + ++ F+ +N VSW + Y+ G EA+ +F K+L
Sbjct: 117 NEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLL 176
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
+++P TF + + AC+ L GM + G+I+K +E D V SL + ++ G +
Sbjct: 177 ESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIH 236
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
AR + D+ +E++++SWT+I+ Y + EAR +F+EMP+RN +SW+AM+A Y +S
Sbjct: 237 LAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGY 296
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+E+L M + + IL+ A + ++ G +HG + + + ++FVS++
Sbjct: 297 PEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSS 356
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------Q 470
L+DMY KCG + R F + ++ + VSWNA++ GY+ G EEA F+ M
Sbjct: 357 LIDMYCKCGETKDGRFLFDTILEK-NMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVS 415
Query: 471 WETR--------------------------PSKFTFETLLAACANISSLEQGKQIHCFVI 504
W P+K TF +LL ACA+ +SL++GK +H ++
Sbjct: 416 WSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIV 475
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ + + AL ++Y K +E + +VF + + +MI G + E+L
Sbjct: 476 KLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLT 535
Query: 565 VFGLMKK-EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F M+K I P+ + F +L AC H G V L +F+SM YG+ P+ H+ C++ +
Sbjct: 536 LFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDM 595
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
R G + E E+F+ MPF P + C+ L E A +L E+
Sbjct: 596 LSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEM 647
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 157/533 (29%), Positives = 270/533 (50%), Gaps = 84/533 (15%)
Query: 43 SLYAHLFQLCASSKAIV---------------EARKLESNLVTFYPTPPVFLLNRAIECY 87
+L+AHLF+ SS+ + EA ++ + F + + N I
Sbjct: 42 ALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGF----DLVVHNCMISAN 97
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGA------------------------------ 117
+ GNLD+AR LFDEMP+ + SW A++
Sbjct: 98 VQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAIS 157
Query: 118 -YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
Y QNGF ++LF+ + S V N++T+ +V+R+ A + G+ + GLIVK G+
Sbjct: 158 GYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEH 217
Query: 177 NVILESSLV-------------------------------DAYGKCMVMTDARRMFDDIQ 205
++ + +SL+ D Y + + +ARR+FD++
Sbjct: 218 DLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMP 277
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N VSW+ ++ RY +G +E++ +F +M++E +P F++ L A + + + GM
Sbjct: 278 QRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMN 337
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IHG + KI FE D V SL +MY KCG +D R L D E+N++SW ++V GY+++G
Sbjct: 338 IHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGH 397
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ EA+ LFN MP RN +SW+A++AG+ + E + M + ++ T +L
Sbjct: 398 MEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCA 457
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA + + GK +HG I + + +V AL DMY K G++ S++ F +M ++++VS
Sbjct: 458 CASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMP-KKNEVS 516
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQG 496
W A++ G A G +EE++T F EM+ + P++ F +L AC++ +++G
Sbjct: 517 WTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKG 569
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 199/437 (45%), Gaps = 70/437 (16%)
Query: 271 IKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I DF+G D+V+ + + V+ G L++AR L D+ + N ISWT+++SG+ GR+RE+
Sbjct: 78 ISKDFDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRES 137
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
F P +NV+SW A ++GY ++ EA+ + ++ ++VT ++ CA L
Sbjct: 138 MWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANL 197
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSN-------------------------------ALL 418
+ +G V G I + Y ++ VSN A+L
Sbjct: 198 GDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAIL 257
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSK 477
D+Y + L AR F +M Q R++VSW+A++ Y + G EE++ F M E +P+
Sbjct: 258 DLYVEMDELGEARRIFDEMPQ-RNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNI 316
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
F ++L+A A++ +L+ G IH V + +E +V +L+++Y KC + +F
Sbjct: 317 SCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDT 376
Query: 538 SSSLDVIICNSMILGFCHN-------------------------------ERGREALEVF 566
+++ N+M+ G+ N E+ E EVF
Sbjct: 377 ILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVF 436
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY--ECMIKLY 624
M G P+ TF +L AC ++ + K GI Q + Y + +Y
Sbjct: 437 NEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKI-VKLGI--QCDTYVGTALTDMY 493
Query: 625 CRYGYMKELEDFVNRMP 641
+ G ++ + NRMP
Sbjct: 494 AKSGDIESSKKVFNRMP 510
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 50/250 (20%)
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
++ K+ GF ++ V N ++ + GNL AR F +M Q +++SW A+++G
Sbjct: 77 QISKDFDGF--------DLVVHNCMISANVQRGNLDEARKLFDEMPQT-NEISWTALISG 127
Query: 453 YARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
+ + G+ E+M F E P F+ +++ A IS ++N + +
Sbjct: 128 FMKYGRVRESMWYF-----ERNP----FQNVVSWTAAISGY----------VQNGFSVEA 168
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM-ILGFCHNERGREALEVFGLMKK 571
+ +++ K LE ++ K + + V C ++ G + V GL+ K
Sbjct: 169 M------KLFIKL--LESEVKPNKVTFTSVVRACANLGDFGL--------GMSVLGLIVK 212
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
G + D + ++ C+ G + LA + FD M K + + ++ LY +
Sbjct: 213 TGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEK-----DVVSWTAILDLYVEMDELG 267
Query: 632 ELEDFVNRMP 641
E + MP
Sbjct: 268 EARRIFDEMP 277
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 285/587 (48%), Gaps = 43/587 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+NA + + Q G +EL S + TY +VL+ A K++H +I
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKKVHSIIK 126
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ L LV Y C + + RR+FD ++ KN WN +V Y G+ KE++
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 231 MFFKMLREDI---RPLN-FTFANALFACSFLS-----SPY--EGMQIHGVII--KIDFEG 277
+F M+ + I RP + F + L +S S Y G+ G+ I ++ + G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 278 DDVVLGSLTEMYVKC---GRLEDARGL----LDQPDERNIISWTSIVSGYAISGRIREAR 330
DV L ++ + V C G L + + + ER I +++ Y+ G + A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
+F +M ERNV+SW +M+AGYTR A+ + M K +D V + IL+ CA
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ GK+VH +I N+ SN+FV NAL+DMY KCG++ +A F M +D +SWN ++
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV-KDIISWNTMI 425
Query: 451 TGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
E +P T +L ACA++S+LE+GK+IH +++RN Y
Sbjct: 426 G--------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ ALV++Y KC L A +F S D++ MI G+ + G EA+ F M+
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
GI+PD ++F IL AC H G ++ +FF M+ + I P+LEHY CM+ L R G +
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ +F+ +P P + + CR L E A R+ EL P
Sbjct: 586 SKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEP 632
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 215/543 (39%), Gaps = 104/543 (19%)
Query: 45 YAHLFQLCASSKAIVEARKLES---------------NLVTFYPT--------------- 74
Y + QLCA K+ + +K+ S LV+FY T
Sbjct: 102 YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 75 -PPVFLLNRAIECYGKCGNL--------------------DDARGLFDEMPERDGGSWNA 113
V+L N + Y K G+ + A LFD++ +RD SWN+
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNS 221
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
M+ Y NG R L ++ M + G+ + T +VL A L + K +H L +K
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS 281
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F + ++L+D Y KC + A R+F+ + +N VSW ++ Y G A+ +
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M +E ++ + L AC+ S G +H I + E + V +L +MY KCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401
Query: 294 RLEDARGLLDQPDERNIISWTSIVS------------------------GYAISGRIRE- 328
+E A + ++IISW +++ G I G I
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRN 461
Query: 329 ------------------------ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
AR LF+ +P ++++SW M+AGY EA+
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYR 422
MR + D+V+ IL C+ ++ G +I +ND++ + + ++D+
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLS 580
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET 482
+ GNL A + + D W A+L G R E +E +E P +
Sbjct: 581 RTGNLSKAYEFMETLPIAPDATIWGALLCG-CRNYHDIELAEKVAERVFELEPENTGYYV 639
Query: 483 LLA 485
LLA
Sbjct: 640 LLA 642
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
++A +ESNL F+ N ++ Y KCG+++ A +F M +D SWN M+G
Sbjct: 378 IKANNMESNL---------FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE- 427
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
+ + T A VL + A L K++HG I++ G+ +
Sbjct: 428 --------------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++LVD Y KC V+ AR +FD I +K+ VSW V++ Y + G G EA+ F +M
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 527
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLE 296
I P +F + L+ACS +G + I+K DF + + + ++ + G L
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLS 586
Query: 297 DARGLLDQ-PDERNIISWTSIVSG----YAISGRIREARELFNEMPERNVISWNAMLAG- 350
A ++ P + W +++ G + I + A +F PE + +LA
Sbjct: 587 KAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENT--GYYVLLANI 644
Query: 351 YTRSLLWKE 359
Y + W+E
Sbjct: 645 YAEAEKWEE 653
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+ G LK D A + CAS A+ +++ ++ + + N ++ Y
Sbjct: 423 TMIGELKPDSRT----MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG L AR LFD +P +D SW M+ Y +G+ + F +M +G+ +++++ +
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 149 VL 150
+L
Sbjct: 539 IL 540
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 191/651 (29%), Positives = 300/651 (46%), Gaps = 53/651 (8%)
Query: 65 ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP 124
E N VT+ N I Y K G ++ AR LFD+MP R+ SWN M+ Y NG
Sbjct: 3 EKNTVTY---------NSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKF 53
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
+LF+ M + + + R+ E + L K C N ++
Sbjct: 54 DEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWN-----AM 108
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+ Y K + +A+R+FD++ KN +SWN ++ Y + + F +M D+ N
Sbjct: 109 ISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWN 168
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV-LGSLTEMYVKCGRLEDARGLLD 303
+ L S ++ Q + + +VV ++ + + G + ++R L D
Sbjct: 169 L-MVDGFIQVGDLDSAWKFFQ--------ETQKPNVVSWVTMLSGFARNGNILESRRLFD 219
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
Q RNI+SW +++S Y I EA LF EMPER+ +SW M+ GY R EA +
Sbjct: 220 QMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEAREL 279
Query: 364 VFLM--RKTTKDIDQVT-----------------LGLILNVCAGLSEIKMGKEVHGFIH- 403
+ M R ++ +G VC + + G HG I+
Sbjct: 280 LNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVC--WNAMIAGYAHHGRINE 337
Query: 404 -----RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ + ++ N ++ Y + G + A F +M +R D VSWN+++ G+ GQ
Sbjct: 338 ALCLSKRMVNKDMVTWNTMISCYAQVGQMDRAVKIFEEMGER-DLVSWNSLIAGFMLNGQ 396
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+ +A+ SF+ M E +P + +F L++CA I++L+ G Q+H V++ Y +V A
Sbjct: 397 NLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNA 456
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC + A VF DVI NS+I G+ N G+EAL++F M EG+ PD
Sbjct: 457 LITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPD 516
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF GIL AC H G V L+ F M Y I P EHY CM+ L R G + E + V
Sbjct: 517 EVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIV 576
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
M T + + CR +G LG AA +L+E P + + +N
Sbjct: 577 RGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSN 627
>gi|302795666|ref|XP_002979596.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
gi|300152844|gb|EFJ19485.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
Length = 571
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 273/570 (47%), Gaps = 44/570 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W AM+ Y ++G R ++ F +M + V ++ITY VL + ++LE G +++H I
Sbjct: 4 WTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVL-GAIQDLEQG--RRIHVRIQ 60
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ G+ ++++ ++L+ Y C + DA R+F+ + +++ VSW I+ AG+ A+
Sbjct: 61 ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMG 120
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F +M + RP T L C P EG IH D V ++ M+
Sbjct: 121 LFRRMQLQGTRPNRITLLELLAWCD---DPGEGAAIHERAFASGLRSDVPVCNAILNMHA 177
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
K GR E A ELF MP RN +SW AM+A
Sbjct: 178 KAGRFE-------------------------------TASELFERMPVRNAVSWTAMMAA 206
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
R+ +AL M + D + ++N C S + +HG I R S+
Sbjct: 207 MVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINAC---SSAATARWIHGCIIRGGCDSD 263
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
VSNA++ Y +CG+L+ A F ++ +RRD VSW +++ +A G+ + + F EM
Sbjct: 264 TAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREML 323
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIH-CFVIRNCYEINVVCRGALVEVYTKCCCL 528
E R ++ T T++ ACA S++++G+ +H C + + + AL+++Y KC L
Sbjct: 324 LEGVRANEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGSL 383
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
E A R+F E DV+ S+I N G A +F M+ EG++P +TF ++ AC
Sbjct: 384 EVAARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAAC 443
Query: 589 IHEGNVKLALQFFDSMRCKY--GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
H G V L +F +R + GI LEH C++ L R G ++E E ++ MPF PT
Sbjct: 444 SHAGMVDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTP 503
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ C+ + G+ AA ++ L+
Sbjct: 504 AVWMAFLAGCKTYEDISRGQRAAAQILGLD 533
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 214/441 (48%), Gaps = 49/441 (11%)
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTL 128
T Y T V + N ++ Y C +L DA +F+ M RD SW +++ A + G FP +
Sbjct: 62 TGYDTDLV-VANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA-AM 119
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
LF M G N+IT +L + G +H G +V + +++++ +
Sbjct: 120 GLFRRMQLQGTRPNRITLLELLAWCDDP---GEGAAIHERAFASGLRSDVPVCNAILNMH 176
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
K A +F+ + +NAVSW ++ + AG +A+ +F M + + P + F
Sbjct: 177 AKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFI 236
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDE 307
+ AC SS IHG II+ + D V ++ Y +CG L++A R ++ +
Sbjct: 237 TVINAC---SSAATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKER 293
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
R+ +SWT+++S +A GRI+ +LF EM +L G
Sbjct: 294 RDHVSWTTMISAFAEFGRIKRCVQLFREM----------LLEGVR--------------- 328
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI--HRNDYSSNIFVSNALLDMYRKCG 425
++VTL ++N CAG S IK G+ VH + ++ + SS++ V+ ALLDMY KCG
Sbjct: 329 ------ANEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSM-VATALLDMYGKCG 381
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+L A F ++ Q D VSW +++ A+ G A F MQ E RP TF +++
Sbjct: 382 SLEVAARIFGELEQ-PDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVV 440
Query: 485 AACANISSLEQGKQIHCFVIR 505
AAC++ ++ GK+ FV R
Sbjct: 441 AACSHAGMVDLGKE---FVTR 458
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 168/343 (48%), Gaps = 23/343 (6%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
A + R S L + P + N + + K G + A LF+ MP R+ SW AM+
Sbjct: 151 AAIHERAFASGLRSDVP-----VCNAILNMHAKAGRFETASELFERMPVRNAVSWTAMMA 205
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
A + G L LF DM GV + I + V+ + + ++ +HG I++ G
Sbjct: 206 AMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINACSSA---ATARWIHGCIIRGGCDS 262
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDI-QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+ + ++++ AY +C + +A R F +I + ++ VSW ++ + G K V +F +M
Sbjct: 263 DTAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREM 322
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVVLGSLTEMYVKCGR 294
L E +R T + AC+ S+ EG +H +I E +V +L +MY KCG
Sbjct: 323 LLEGVRANEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGS 382
Query: 295 LEDAR---GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAM 347
LE A G L+QPD ++SWTSI++ A +G A LF M V +++ ++
Sbjct: 383 LEVAARIFGELEQPD---VVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSV 439
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL---GLILNVCA 387
+A + + + +FV +RK ++ ++TL G I+++ A
Sbjct: 440 VAACSHAGMVDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLA 482
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 185/429 (43%), Gaps = 50/429 (11%)
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
V W ++ Y G+ A+ F +M R + P T+ L A L +G +IH
Sbjct: 2 VIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDLE---QGRRIHVR 58
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I + ++ D VV +L +MY C L DA + + D R+++SWTSI++ A +G A
Sbjct: 59 IQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAA 118
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
LF M L G TR +++TL +L C
Sbjct: 119 MGLFRRM----------QLQG-TRP--------------------NRITLLELLAWCDDP 147
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
E G +H + S++ V NA+L+M+ K G +A F +M R+ VSW A+
Sbjct: 148 GE---GAAIHERAFASGLRSDVPVCNAILNMHAKAGRFETASELFERMPV-RNAVSWTAM 203
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ R G+ ++A+ F +M+ + P F T++ AC SS + IH +IR
Sbjct: 204 MAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINAC---SSAATARWIHGCIIRGGC 260
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFG 567
+ + A++ Y +C L+ A R F E D + +MI F R + +++F
Sbjct: 261 DSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFR 320
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI--KLYC 625
M EG++ + +T ++ AC +K D C G QLE M+ L
Sbjct: 321 EMLLEGVRANEVTLITVVNACAGASAIKEGRWVHD---CVIGY--QLERSSSMVATALLD 375
Query: 626 RYGYMKELE 634
YG LE
Sbjct: 376 MYGKCGSLE 384
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 12/293 (4%)
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
V+ W AM+ GY + + A+ F M + D++T +L + +++ G+ +H
Sbjct: 1 VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLG---AIQDLEQGRRIHV 57
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
I Y +++ V+NAL+ MY C +L A F M RD VSW +++ AR G
Sbjct: 58 RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDH-RDVVSWTSIIAANARAGDFP 116
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
AM F MQ + TRP++ T LLA C + +G IH + +V A++
Sbjct: 117 AAMGLFRRMQLQGTRPNRITLLELLAWCDDPG---EGAAIHERAFASGLRSDVPVCNAIL 173
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++ K E A +F+ + + +M+ R +AL +F M+ +G++PD I
Sbjct: 174 NMHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSI 233
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
F ++ AC + + + G +I+ Y R G +KE
Sbjct: 234 AFITVINACSSAATAR----WIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKE 282
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N I Y +CG+L +A F E+ ER D SW M+ A+ + G R ++LF +M GV
Sbjct: 268 NAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGV 327
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVILESSLVDAYGKCMVMTDAR 198
AN++T V+ + A + + +H ++ + ++ ++L+D YGKC + A
Sbjct: 328 RANEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAA 387
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F +++ + VSW I+ G+G A +F M E +RP++ TF + + ACS
Sbjct: 388 RIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAG 447
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVL---GSLTEMYVKCGRLEDARGLLDQ-PDERNIISWT 314
G + + K EG ++ L G + ++ + GRLE+A ++D P + W
Sbjct: 448 MVDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWM 507
Query: 315 SIVSG 319
+ ++G
Sbjct: 508 AFLAG 512
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCF 502
V W A++TGYA+ G A+ F+EM+ P K T+ +L A I LEQG++IH
Sbjct: 2 VIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGA---IQDLEQGRRIHVR 58
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+ Y+ ++V AL+++Y C L A RVF+ DV+ S+I A
Sbjct: 59 IQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAA 118
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEG-NVKLALQFFDSMRCKYGIIPQLEHYECMI 621
+ +F M+ +G +P+ IT +L C G + + F S G+ + ++
Sbjct: 119 MGLFRRMQLQGTRPNRITLLELLAWCDDPGEGAAIHERAFAS-----GLRSDVPVCNAIL 173
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTV 646
++ + G + + RMP V
Sbjct: 174 NMHAKAGRFETASELFERMPVRNAV 198
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 284/542 (52%), Gaps = 24/542 (4%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCM---VMTDARRMF-------DDIQNKNAVSWN 213
Q+H ++ GF N L + ++ + ++ AR +F + N WN
Sbjct: 32 QIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWN 91
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
I++ + + +EA V+F ML + F+F+ L ACS L EGMQIHG++ ++
Sbjct: 92 AIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRM 151
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ D + L +Y++CG L AR L D+ +R+ +S+ S++ GY G ++ ARELF
Sbjct: 152 EIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELF 211
Query: 334 NEMP--ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ MP ++N+ISWN+M++GY RS +E L + + + D ++ +++ C
Sbjct: 212 DVMPMEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPKRDLISWNSMIDGC----- 263
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNA-LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+K GK + N VS A ++D Y K G + AR F +M +R D +S NA++
Sbjct: 264 VKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPER-DVISCNAMM 322
Query: 451 TGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
GY + G EA+ F +M + E P T L+A A + ++G +HC++ N +
Sbjct: 323 AGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGF 382
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
++ AL+++Y KC ++ A+ VF++ + N++I G + G A E+F
Sbjct: 383 SLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFME 442
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M+K +KPD ITF G+L AC H G VK L F+ MR + + P+L+HY CM+ + R G
Sbjct: 443 MEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAG 502
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+++E + FV +MP P + R + CR + T+GE A+ L ++ + P + + +N
Sbjct: 503 HVEEAKKFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSN 562
Query: 689 RF 690
+
Sbjct: 563 IY 564
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 237/492 (48%), Gaps = 47/492 (9%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WNA++ +++ P +F M +GV ++ +++ VL++ + + Q+HGL+
Sbjct: 90 WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 149
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ +V L++ L+ Y +C + AR++FD + +++VS+N ++ Y+ G K A
Sbjct: 150 RMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARE 209
Query: 231 MFFKMLREDIRPL---NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+F D+ P+ N N++ S + EG+++ + + + D + S+ +
Sbjct: 210 LF------DVMPMEQKNLISWNSMI--SGYARSEEGLRVAWELFEEMPKRDLISWNSMID 261
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
VKCG++E+A L +Q +R+++SW ++V GYA G I AR LF+EMPER+VIS NAM
Sbjct: 262 GCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAM 321
Query: 348 LAGYTRSLLWKEALDFVF-LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+AGY ++ EAL+F ++ + D TL + L+ A L G +H +I N
Sbjct: 322 MAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNG 381
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+S + + AL+DMY KCG++ +A F + + WNA++ G A G E A F
Sbjct: 382 FSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSID-HWNAIIGGLAIHGLGEVAFELF 440
Query: 467 SEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
EM+ +P TF +L AC + +++G
Sbjct: 441 MEMEKLFVKPDDITFIGVLNACNHAGLVKEG----------------------------L 472
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
C E RV K L C ILG R E ++K I+P+ + + +L
Sbjct: 473 MCFELMRRVHKVEPKLQHYGCMVDILG-----RAGHVEEAKKFVEKMPIEPNDVVWRTLL 527
Query: 586 LACIHEGNVKLA 597
AC + N +
Sbjct: 528 SACRNHENFTIG 539
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 189/427 (44%), Gaps = 47/427 (11%)
Query: 20 PTPSKTL---TKTISGHLKSDEP--VSYSLYAH-----LFQLCASSKAIVEARKLES--N 67
P K L ISG+ +S+E V++ L+ L + V+ K+E+ +
Sbjct: 215 PMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHH 274
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V ++ Y K G +D ARGLFDEMPERD S NAM+ Y QNG
Sbjct: 275 LFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEA 334
Query: 128 LELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L F DM + + + T L + A+ LH I GF + L +L+D
Sbjct: 335 LNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALID 394
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + +A +F+DI +K+ WN I+ + G G+ A +F +M + ++P + T
Sbjct: 395 MYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDIT 454
Query: 247 FANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
F L AC+ EG+ ++H V K+ G + ++ + G +E+A+
Sbjct: 455 FIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQH------YGCMVDILGRAGHVEEAK 508
Query: 300 GLLDQ-PDERNIISWTSIVSG------YAISGRIREARELFNEMPERNVISWNAMLAGYT 352
+++ P E N + W +++S + I + + + + + + + AG+
Sbjct: 509 KFVEKMPIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFG 568
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+W + +M++ +D+ ++ G S+I++ VH F R+ +
Sbjct: 569 ---MWNDVYRIRMMMKQ--RDLKKI---------PGCSQIELEGNVHEFFVRDKSHPQVR 614
Query: 413 VSNALLD 419
++LD
Sbjct: 615 EIYSMLD 621
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 171/368 (46%), Gaps = 38/368 (10%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+ S+SL + + C+ I E ++ L VFL N + Y +CG L AR
Sbjct: 121 DKFSFSL---VLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIAR 177
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFD M +RD S+N+M+ Y ++G ELF M N I++ +++ A
Sbjct: 178 QLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPME--QKNLISWNSMISGYARSE 235
Query: 158 E-LGVSKQLHGLIVKRGF------------CG---------------NVILESSLVDAYG 189
E L V+ +L + KR CG +V+ +++VD Y
Sbjct: 236 EGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYA 295
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFA 248
K + AR +FD++ ++ +S N ++ Y+ G+ EA+ F ML R+++ P N T
Sbjct: 296 KLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLL 355
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L A + L EG+ +H I F + + +L +MY KCG +++A + + D++
Sbjct: 356 ITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDK 415
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFV 364
+I W +I+ G AI G A ELF EM + V I++ +L + L KE L
Sbjct: 416 SIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCF 475
Query: 365 FLMRKTTK 372
LMR+ K
Sbjct: 476 ELMRRVHK 483
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 262/533 (49%), Gaps = 38/533 (7%)
Query: 164 QLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS---WNVIVRRY 219
QLH ++K G G+ SL++A + + + +S +NV++R
Sbjct: 34 QLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAL 93
Query: 220 LVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
L AG+ ++A+ +F +ML + P T A AL +CS + + G I +K D
Sbjct: 94 LHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMAD 153
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VL SL MY C R++ + A+ LF+ + E
Sbjct: 154 RFVLSSLIHMYASC---------------RDVAA----------------AQLLFDAVEE 182
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
V+ WNA++ Y ++ W E ++ M + D++TL ++ C + + K+GK V
Sbjct: 183 NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWV 242
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
++ N + AL+DMY KCG L AR F M Q RD V+W+A+++GY + Q
Sbjct: 243 AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGM-QSRDVVAWSAMISGYTQADQ 301
Query: 459 SEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA+ FSEMQ E P+ T ++L+ACA + +LE GK +H ++ R + ++ A
Sbjct: 302 CREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTA 361
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
LV+ Y KC C++ A+ F+ + ++I G N RGREALE+F M+K I+P
Sbjct: 362 LVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPT 421
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+TF G+L+AC H V+ + FDSM YGI P+ EHY C++ L R G + E F+
Sbjct: 422 DVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFI 481
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE A +++ LNP + + +N +
Sbjct: 482 RTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIY 534
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 185/397 (46%), Gaps = 34/397 (8%)
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVS 162
P +N ++ A G P L LF++M + + V +Q T A L+S + L V
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ + VKRG + + SSL+ Y C + A+ +FD ++ V WN I+ Y+
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
GN E V MF ML + T + + AC + G + + + + ++
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY KCG L AR L D R++++W++++SGY + + REA LF+EM V
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEV- 317
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ + VT+ +L+ CA L ++ GK VH +I
Sbjct: 318 ------------------------------EPNDVTMVSVLSACAVLGALETGKWVHSYI 347
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
R S I + AL+D Y KCG + A F M ++ +W A++ G A G+ EA
Sbjct: 348 RRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPV-KNSWTWTALIKGMATNGRGREA 406
Query: 463 MTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
+ FS M+ + P+ TF +L AC++ +E+G++
Sbjct: 407 LELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR 443
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 143/264 (54%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+L+ I Y C ++ A+ LFD + E WNA++ AY +NG +E+F M
Sbjct: 155 FVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEV 214
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV+ ++IT +V+ + + + K + + ++G N L ++L+D Y KC + A
Sbjct: 215 GVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKA 274
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
RR+FD +Q+++ V+W+ ++ Y A +EA+ +F +M ++ P + T + L AC+ L
Sbjct: 275 RRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVL 334
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G +H I + ++ +L + Y KCG ++DA + +N +WT+++
Sbjct: 335 GALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALI 394
Query: 318 SGYAISGRIREARELFNEMPERNV 341
G A +GR REA ELF+ M + ++
Sbjct: 395 KGMATNGRGREALELFSSMRKASI 418
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 31/311 (9%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+ I+ Y KCG L AR LFD M RD +W+AM+ YTQ L LF +M +
Sbjct: 257 LMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAE 316
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
V N +T +VL + A L K +H I ++ +IL ++LVD Y KC + DA
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F+ + KN+ +W +++ G G+EA+ +F M + I P + TF L ACS
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436
Query: 259 SPYEG-------MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNI 310
EG Q +G+ + + G + ++ + G +++A + P E N
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEH------YGCVVDLLGRAGLIDEAYQFIRTMPIEPNA 490
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG--------YTRSLLWKEALD 362
+ W +++S A+ + E + ++S N +G Y WK A
Sbjct: 491 VIWRALLSSCAVHKNVEIGEEAL-----KQIVSLNPSHSGDYILLSNIYASVGQWKNAA- 544
Query: 363 FVFLMRKTTKD 373
++RK KD
Sbjct: 545 ---MIRKEMKD 552
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L ++ Y KCG +DDA F+ MP ++ +W A++ NG LELF M
Sbjct: 356 IILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRK 415
Query: 137 SGVSANQITYANVLRSSAEE--LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+ + +T+ VL + + +E G + + G +VD G+ ++
Sbjct: 416 ASIEPTDVTFIGVLMACSHSCLVEEG-RRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLI 474
Query: 195 TDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN---GKEAV 229
+A + + NAV W ++ V N G+EA+
Sbjct: 475 DEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 164/607 (27%), Positives = 299/607 (49%), Gaps = 39/607 (6%)
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG+L AR LFD++P +NA++ AY+ G N T+ V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L++ + L+L ++ +H + G ++ + ++LVD Y KC A +F + ++
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
V+WN ++ Y + G + + ++++D P T L + + +G +H
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 270 IIK---IDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ + D V++G+ L +MY KCG L A + + RN ++W+++V G+ + GR
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ EA LF + MLA + L F + ++ L
Sbjct: 315 MLEAFSLFKD-----------MLA---------QGLCF----------LSPTSVASALRA 344
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA LS++ +GK++H + ++ +++ N+LL MY K G + A F QM + D VS
Sbjct: 345 CANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVK-DTVS 403
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIH-CFV 503
++A+++GY + G+++EA F +MQ +P T +L+ AC+++++L+ GK H +
Sbjct: 404 YSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVI 463
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+R +C AL+++Y KC ++ + ++F + D++ N+MI G+ + G+EA
Sbjct: 464 VRGIASETSICN-ALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEAT 522
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F MK + +PD +TF ++ AC H G V ++F M KYGI P++EHY M+ L
Sbjct: 523 ALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDL 582
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G++ E F+ MP V + + CR + LG+ + + +L P F
Sbjct: 583 LARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNF 642
Query: 684 KITTNRF 690
+ +N F
Sbjct: 643 VLLSNIF 649
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 219/467 (46%), Gaps = 40/467 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P +Y+ + + + C++ + AR + + +F+ ++ Y KC + A
Sbjct: 126 QPNNYT-FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAA 184
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F MP RD +WNAML Y +G T+ L M + N T +L A+
Sbjct: 185 TVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHG 243
Query: 158 ELGVSKQLHGLIVK----RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
L + +H V+ V++ ++L+D Y KC + A R+F+ + +N V+W+
Sbjct: 244 ALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWS 303
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT-FANALFACSFLSSPYEGMQIHGVIIK 272
+V +++ G EA +F ML + + L+ T A+AL AC+ LS G Q+H ++ K
Sbjct: 304 ALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAK 363
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
D SL MY K G ++ A L DQ ++ +S++++VSGY +G+ EA +
Sbjct: 364 SGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRV 423
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F +M NV D T+ ++ C+ L+ +
Sbjct: 424 FRKMQACNV-------------------------------QPDVATMVSLIPACSHLAAL 452
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GK HG + +S + NAL+DMY KCG + +R F M RD VSWN ++ G
Sbjct: 453 QHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPA-RDIVSWNTMIAG 511
Query: 453 YARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
Y G +EA F +M+ + P TF L++AC++ + +GK+
Sbjct: 512 YGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKR 558
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 201/448 (44%), Gaps = 38/448 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLV---TFYPTPPVFLLNRAI-ECYGK 89
++ D + S L L A A+ + R + + V + + L+ A+ + Y K
Sbjct: 221 MQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAK 280
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYAN 148
CG+L A +F+ M R+ +W+A++G + G LF DM G+ + + A+
Sbjct: 281 CGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVAS 340
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
LR+ A +L + KQLH L+ K G ++ +SL+ Y K ++ A +FD + K+
Sbjct: 341 ALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKD 400
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
VS++ +V Y+ G EA +F KM +++P T + + ACS L++ G HG
Sbjct: 401 TVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHG 460
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
+I + + +L +MY KCGR++ +R + D R+I+SW ++++GY I G +E
Sbjct: 461 SVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKE 520
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A LF LD M+ + D VT +++ C+
Sbjct: 521 ATALF---------------------------LD----MKHQACEPDDVTFICLISACSH 549
Query: 389 LSEIKMGKE-VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ GK H H+ + + ++D+ + G L A + M + D W
Sbjct: 550 SGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWG 609
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWETRP 475
A+L G R ++ + S M + P
Sbjct: 610 ALL-GACRVHKNIDLGKQVSSMIQQLGP 636
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 159/332 (47%), Gaps = 11/332 (3%)
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
I G + AR LF+++P + +NA++ Y+ + L R+ + T
Sbjct: 75 ICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPF 134
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L C+ L +++ + VH R +++FVS AL+D+Y KC + R A F +M R
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPA-R 193
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
D V+WNA+L GYA G+ + + MQ + P+ T LL A +L QG+ +H
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 502 FVIRNC----YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+ +R C ++ V+ AL+++Y KC L YA RVF+ + + + ++++ GF
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 558 RGREALEVFGLMKKEG---IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
R EA +F M +G + P + L AC + ++ L Q ++ K G+ L
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQ-LHALLAKSGLHTDL 370
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ +Y + G + + ++M TV
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTV 402
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 280/587 (47%), Gaps = 34/587 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G +D+A + D N M+ + G P L + M G ++ T+ V+
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ A L + HG+++K G +V +SLV Y K ++ DA R+FD + ++ V
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+WN++V Y+ G G A+ F +M +++ + AL AC S +G +IHG
Sbjct: 175 TWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGY 234
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+I+ E D V SL +MY KCG + A
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGE-------------------------------VAYA 263
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R +F MP R V++WN M+ GY + EA D MR ++ VT +L CA
Sbjct: 264 RSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQT 323
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
G+ VHG++ R + ++ + ALL+MY K G + S+ F +++ + VSWN +
Sbjct: 324 ESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT-LVSWNNM 382
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ Y + EA+T F E+ P FT T++ A + SL +QIH ++I Y
Sbjct: 383 IAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGY 442
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
N + A++ +Y + + + +F + S DVI N+MI+G+ + +G+ ALE+F
Sbjct: 443 AENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDE 502
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
MK G++P+ TF +L AC G V F+ M +YG+IPQ+EHY CM L R G
Sbjct: 503 MKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREG 562
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
++E+ F+ MP +PT + + R + E+AA R+ +L
Sbjct: 563 DLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 207/451 (45%), Gaps = 34/451 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + E R ++ V+ N + Y K G ++DA +FD MP RD
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLH 166
+WN M+ Y NG L F +M+ + V + + L + E K++H
Sbjct: 173 IVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
G +++ G ++ + +SL+D Y KC + AR +F + + V+WN ++ Y +
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA F +M E ++ T N L AC+ S G +HG +++ F V+ +L
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
EMY K G++E + + + + ++SW N
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSW-------------------------------NN 381
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
M+A Y ++ EA+ + D T+ ++ L ++ +++H +I
Sbjct: 382 MIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLG 441
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
Y+ N + NA+L MY + G++ ++R F +M +D +SWN ++ GYA GQ + A+ F
Sbjct: 442 YAENTLIMNAVLHMYARSGDVVASREIFDKMVS-KDVISWNTMIMGYAIHGQGKTALEMF 500
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQG 496
EM++ +P++ TF ++L AC+ +++G
Sbjct: 501 DEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 5/286 (1%)
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
P +R S S+V A GR+ EA E + + N M+ G+ + L AL
Sbjct: 38 PPKRG--SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAY 95
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M + D+ T +++ CA L + G+ HG + + +++ N+L+ Y K
Sbjct: 96 RGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKL 155
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFET 482
G + A F M R D V+WN ++ GY G A+ F EM E +
Sbjct: 156 GLVEDAERVFDGMPVR-DIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIA 214
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LAAC S QGK+IH +VIR+ E ++ +L+++Y KC + YA VF
Sbjct: 215 ALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT 274
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
V+ N MI G+ NER EA + F M+ EG++ + +T +L AC
Sbjct: 275 VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAAC 320
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L CA +++ + R + +V P V L +E YGK G ++ + +F ++ +
Sbjct: 315 NLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANK 374
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
SWN M+ AY + LFL++ + + + T + V+ + L +Q+H
Sbjct: 375 TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIH 434
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I+ G+ N ++ ++++ Y + + +R +FD + +K+ +SWN ++ Y + G GK
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG-------MQIHGVIIKIDFEG 277
A+ MF +M ++P TF + L ACS EG +Q +G+I +I+ G
Sbjct: 495 TALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYG 552
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 314/655 (47%), Gaps = 46/655 (7%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L L + C S +I + L S + F++ + Y + +L A LF+E
Sbjct: 6 LLVKLLETCCSKISITQ---LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEET 62
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS---ANQITYANVLRSSA--EELE 158
P + WNA+L +Y G TL LF MN V+ + T + L+S + ++LE
Sbjct: 63 PCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLE 122
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
LG K +HG + K+ ++ + S+L++ Y KC M DA ++F + + V W I+
Sbjct: 123 LG--KMIHGFL-KKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITG 179
Query: 219 YLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+ + A+ F +M+ E + P T +A AC+ LS G +HG + + F+
Sbjct: 180 YEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDT 239
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ S+ +Y K +G IR A LF EMP
Sbjct: 240 KLCLANSILNLYGK-------------------------------TGSIRIAANLFREMP 268
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+++ISW++M+A Y + AL+ M ++++VT+ L CA S ++ GK+
Sbjct: 269 YKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQ 328
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+H + +I VS AL+DMY KC + +A F +M ++D VSW + +GYA G
Sbjct: 329 IHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMP-KKDVVSWAVLFSGYAEIG 387
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ +++ F M TRP +LAA + + ++Q +H FV ++ ++ N
Sbjct: 388 MAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGA 447
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IK 575
+L+E+Y KC ++ A +VFK DV+ +S+I + + +G EAL++ M +K
Sbjct: 448 SLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVK 507
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ +TF IL AC H G ++ ++ F M +Y ++P +EHY M+ L R G + + D
Sbjct: 508 PNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALD 567
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+N MP + + CR + +GE AA L L+P + + +N +
Sbjct: 568 MINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIY 622
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 179/386 (46%), Gaps = 36/386 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CASS + E +++ V + + + ++ Y KC + ++A LF+ MP++D SW
Sbjct: 317 CASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSW 376
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ---LHGL 168
+ Y + G ++L +F +M +G + I +L +S+ ELG+ +Q LH
Sbjct: 377 AVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASS---ELGIVQQALCLHAF 433
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+ K GF N + +SL++ Y KC + +A ++F +++ + V+W+ I+ Y G G+EA
Sbjct: 434 VTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEA 493
Query: 229 VVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQI-HGVIIKIDFEGDDVVLGSLT 286
+ + +M D++P + TF + L ACS EG+++ H ++ + + G +
Sbjct: 494 LKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMV 553
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
++ + G L+ A +++ P + W +++ I I+ E+ N+ +
Sbjct: 554 DLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIK-----IGELAALNLFLLD 608
Query: 346 AMLAGYTRSLL--------WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
AGY L W +A L+++ L G S +++ E
Sbjct: 609 PNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENR-----------LKKIVGQSMVEIKNE 657
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRK 423
VH FI + + S+ + +M RK
Sbjct: 658 VHSFIASDRFHGE---SDQIYEMLRK 680
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/623 (28%), Positives = 305/623 (48%), Gaps = 45/623 (7%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L+ EP ++ A + C+S ++ + L S L+ + N + Y K G +
Sbjct: 200 LQGLEPDRFAFVAAI-DACSSIPSLEQGTVLHSRLLASSVECDGVVGNALLNFYAKAGLV 258
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
++R LF M ++ +W+A++ AY QNG +ELF +M GV+ N++T+ ++L S
Sbjct: 259 HESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSLLFSC 318
Query: 154 AEE---LELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ +L +++H I+K G+V++ ++LV+ YG+C ++DA+ +FD++Q++N
Sbjct: 319 SHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNI 378
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKML--REDIRPLNFTFANALFACSFLSSPYEGMQIH 267
SWN ++ Y + EA+ F ML E ++P TF +A AC + ++IH
Sbjct: 379 TSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIH 438
Query: 268 GVIIKI-DFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
I + DVVLGS L +MY C RL DA
Sbjct: 439 SRISQSWPSNQTDVVLGSALIKMYGNCRRLADAA-------------------------- 472
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
++ ++MP NVISW +M+ ++ + A+ M+ D VT+ ++
Sbjct: 473 -----QVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKA 527
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--RDK 443
A L ++K G E H ++++ V NAL+ +Y G+L++A F ++ Q+ D
Sbjct: 528 AANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDV 587
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACA-NISSLEQGKQIHC 501
V+WN++L+ + + G +A+ +F M R P K TF +L ACA + S L QG +IH
Sbjct: 588 VTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHA 647
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+ ++ L+ +Y++C L A +VF + +V+ ++M HN
Sbjct: 648 LAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADG 707
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL+ F M GI+P+ +TF IL C H G + A+ + +M + + P ++HY C++
Sbjct: 708 ALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLL 767
Query: 622 KLYCRYGYMKELEDFVNRMPFNP 644
L R G E+ +P NP
Sbjct: 768 DLLARAGKFHRAEELATHLP-NP 789
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/604 (25%), Positives = 293/604 (48%), Gaps = 46/604 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ +L +K + R + ++T +L N I+ YG+C ++ DA +F + ++
Sbjct: 1 MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKN 60
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQL 165
+W ++ A+T NG +ELF +M+ GV +++ T++ +L S+ L + K +
Sbjct: 61 VFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTI 120
Query: 166 HGLIVKRGF----CGNVILESSLVDAYGKCMVMTDARRMFDDIQ----NKNAVSWNVIVR 217
H I ++G VI ++++DAY + + A +F+ +Q + + ++W ++
Sbjct: 121 HSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMT 180
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y G+ +EA+++F KM + + P F F A+ ACS + S +G +H ++ E
Sbjct: 181 AYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVEC 240
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D VV +L Y K G + ++R L +N+++W++IV+ YA +G A ELF EM
Sbjct: 241 DGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREM- 299
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+L G + FV L+ + GLI ++ G++
Sbjct: 300 ---------LLDGVA-----PNKVTFVSLLFSCSH------AGLI-------KDLARGRK 332
Query: 398 VHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H I ++ ++ ++ V+ AL++MY +CG++ A+ F +M Q R+ SWNA+L Y+
Sbjct: 333 IHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEM-QHRNITSWNAMLVTYSLN 391
Query: 457 GQSEEAMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN--CYEIN 511
+S EA+ F M E +P TF + AC + L + +IH + ++ + +
Sbjct: 392 QRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTD 451
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
VV AL+++Y C L A +V + +VI SMIL NE A+ V+ M+
Sbjct: 452 VVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQL 511
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
G KPD +T ++ A + ++K ++F + +G ++ LY G ++
Sbjct: 512 HGHKPDPVTMVTVIKAAANLHDLKRGIEFH-AQAAAFGFATSTVVGNALVTLYGTSGDLQ 570
Query: 632 ELED 635
E+
Sbjct: 571 AAEN 574
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/477 (30%), Positives = 249/477 (52%), Gaps = 37/477 (7%)
Query: 206 NKNAVSWNVIVRRYLVA-GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ N ++N+++R N A+ +F +M+ + P NFTF +C+ L+S
Sbjct: 83 HPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHAC 142
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
H ++ K+ D SL Y +CG
Sbjct: 143 AAHSLLFKLALHSDPHTAHSLITAYARCGL------------------------------ 172
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLIL 383
+ AR++F+E+P R+ +SWN+M+AGY ++ +EA++ F + R+ + D+++L +L
Sbjct: 173 -VASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLL 231
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C L ++++G+ V GF+ + N ++ +AL+ MY KCG L SAR F M+ R D
Sbjct: 232 GACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAAR-DV 290
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
++WNAV++GYA+ G ++EA+ F M+ + +K T +L+ACA I +L+ GKQI +
Sbjct: 291 ITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEY 350
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+ ++ ++ AL+++Y K L+ A RVFK+ + N+MI + + +EA
Sbjct: 351 ASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEA 410
Query: 563 LEVFGLMKKEG--IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
L +F M EG +P+ ITF G+L AC+H G V + FD M +G++P++EHY CM
Sbjct: 411 LSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCM 470
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L R G++ E D + +MP P L + CR +GE R + E++P
Sbjct: 471 VDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDP 527
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 260/559 (46%), Gaps = 82/559 (14%)
Query: 48 LFQLCASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM-P 104
L + C+S+K + +++ + +V + TP LL++AI N + LF + P
Sbjct: 30 LAKQCSSTKTL---QQVHTQMVVNSSIHTPNNHLLSKAIHL----KNFPYSSLLFSHIAP 82
Query: 105 ERDGGSWNAMLGAYTQ--NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ ++N M+ A T + +P L LF M ++ + T+ S A L +
Sbjct: 83 HPNDYAFNIMIRALTTTWHNYP-LALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHA 141
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
H L+ K + SL+ AY +C ++ AR++FD+I ++++VSWN ++ Y A
Sbjct: 142 CAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKA 201
Query: 223 GNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +EAV +F +M R D P + + L AC L G + G +++ + +
Sbjct: 202 GCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYI 261
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY KCG LE AR + D R++I+W +++SGYA +G EA LF+ M E V
Sbjct: 262 GSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCV 321
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ +++TL +L+ CA + + +GK++ +
Sbjct: 322 TA-------------------------------NKITLTAVLSACATIGALDLGKQIDEY 350
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + +IFV+ AL+DMY K G+L +A+ F M Q +++ SWNA+++ A G+++E
Sbjct: 351 ASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQ-KNEASWNAMISALAAHGKAKE 409
Query: 462 AMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
A++ F M E RP+ TF LL+AC + +++G ++ +++ G +
Sbjct: 410 ALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRL--------FDMMSTLFGLV 461
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
++ C ++ R E + L++K KPD
Sbjct: 462 PKIEHYSCMVDLL-------------------------ARAGHLYEAWDLIRKMPEKPDK 496
Query: 579 ITFHGILLACIHEGNVKLA 597
+T +L AC + NV +
Sbjct: 497 VTLGALLGACRSKKNVDIG 515
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 192/426 (45%), Gaps = 45/426 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
F CA+ ++ A S L + I Y +CG + AR +FDE+P RD
Sbjct: 128 FFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRD 187
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLH 166
SWN+M+ Y + G +E+F +M G ++++ ++L + E +L + + +
Sbjct: 188 SVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVE 247
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
G +V+RG N + S+L+ Y KC + ARR+FD + ++ ++WN ++ Y G
Sbjct: 248 GFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMAD 307
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA+++F M + + T L AC+ + + G QI + F+ D V +L
Sbjct: 308 EAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALI 367
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER------N 340
+MY K G L++A+ + ++N SW +++S A G+ +EA LF M + N
Sbjct: 368 DMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPN 427
Query: 341 VISWNAMLAGYTRSLLWKEA------LDFVF---------------------------LM 367
I++ +L+ + L E + +F L+
Sbjct: 428 DITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLI 487
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS--NIFVSNAL---LDMYR 422
RK + D+VTLG +L C + +G+ V I D S+ N +S+ + L+M+
Sbjct: 488 RKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWE 547
Query: 423 KCGNLR 428
+R
Sbjct: 548 DSARMR 553
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 270/554 (48%), Gaps = 33/554 (5%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G+ + Y VL+ ++ +L +KQ+H I+K N + ++L+ Y +C + +A
Sbjct: 23 GLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEA 82
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R +FD + K+ SWN ++ Y+ + ++A+ +F +M E ++P T+ L AC+ L
Sbjct: 83 RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S+ G ++H I E D V +L MY KCG + +AR + D +IISWT ++
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
YA SG +EA L +M E+ NA +
Sbjct: 203 GAYAQSGNGKEAYRLMLQM-EQEGFKPNA------------------------------I 231
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T ILN CA +K K VH ++ V AL+ MY K G++ AR+ F +M
Sbjct: 232 TYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+ RD VSWN ++ +A G+ EA F +MQ E +P F ++L ACA+ +LE
Sbjct: 292 -KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWV 350
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K+IH + + E++V ALV +Y+K ++ A VF +V+ N+MI G +
Sbjct: 351 KKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQH 410
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
G++ALEVF M G+KPD +TF +L AC H G V + +M YGI P + H
Sbjct: 411 GLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSH 470
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
CM+ L R G + E + F++ M +P + CR G LGE A+ +L+
Sbjct: 471 CNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLD 530
Query: 677 PWAPFQFKITTNRF 690
P + + +N +
Sbjct: 531 PKNAATYVLLSNIY 544
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 260/557 (46%), Gaps = 70/557 (12%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+Y + + C K ++ A+++ ++ ++N + Y +CG L +AR +FD +
Sbjct: 30 MYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL 89
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
++ G SWNAM+ Y ++ + LF +M H GV N TY +L++ A L K
Sbjct: 90 VKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGK 149
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
++H I G +V + ++L+ YGKC + +ARR+FD++ N + +SW V++ Y +G
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
NGKEA + +M +E +P T+ + L AC+ + ++H + E D V
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY K G ++DAR + D+ R+++SW ++ +A GR EA +LF +M
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
D + ILN CA ++ K++H
Sbjct: 330 -------------------------------DAIMFLSILNACASAGALEWVKKIHRHAL 358
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ ++ V AL+ MY K G++ AR+ F +M + R+ VSWNA+++G A+ G ++A+
Sbjct: 359 DSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM-KVRNVVSWNAMISGLAQHGLGQDAL 417
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M +P + TF +L+AC++ +++G+ + A+ +VY
Sbjct: 418 EVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYL---------------AMTQVY 462
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMI--LGFCHNERGREALEVFGLMKKEGIKPDHIT 580
DV CN M+ LG R +E + + PD T
Sbjct: 463 ---------------GIEPDVSHCNCMVDLLG-----RAGRLMEAKLFIDNMAVDPDEAT 502
Query: 581 FHGILLACIHEGNVKLA 597
+ +L +C GNV+L
Sbjct: 503 WGALLGSCRTYGNVELG 519
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 194/425 (45%), Gaps = 42/425 (9%)
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA+V+ L+ + +F + L C Q+H IIK E + V+ +L
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+Y++CGRL++AR + D +++ SW ++++GY +A LF EM V
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV----- 125
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+ T +IL CA LS +K GKEVH I
Sbjct: 126 --------------------------QPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
S++ V ALL MY KCG++ AR F + D +SW ++ YA+ G +EA
Sbjct: 160 LESDVRVGTALLRMYGKCGSINEARRIFDNL-MNHDIISWTVMIGAYAQSGNGKEAYRLM 218
Query: 467 SEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+M+ E +P+ T+ ++L ACA+ +L+ K++H + E++V ALV++Y K
Sbjct: 219 LQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKS 278
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
++ A VF DV+ N MI F + RG EA ++F M+ EG KPD I F IL
Sbjct: 279 GSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSIL 338
Query: 586 LACIHEGNV----KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
AC G + K+ DS G+ + ++ +Y + G + + +RM
Sbjct: 339 NACASAGALEWVKKIHRHALDS-----GLEVDVRVGTALVHMYSKSGSIDDARVVFDRMK 393
Query: 642 FNPTV 646
V
Sbjct: 394 VRNVV 398
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 1/174 (0%)
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
SE + + +Q F + +L C L KQ+H +I++ E N L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ VY +C L+ A VF N+MI G+ ++ +A+ +F M EG++P+
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
T+ IL AC +K + +R G+ + ++++Y + G + E
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIR-HGGLESDVRVGTALLRMYGKCGSINE 182
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 257/497 (51%), Gaps = 35/497 (7%)
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ R+ +AV + ++ IR P + A+ L C S +G IH +
Sbjct: 17 LLSRHATKAELSQAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 274 DFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F+ + +L + L MY+KCG+ DA + DQ RN+ SW ++VSG+ SG + AR +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVV 135
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+ MPER+V+SWN M+ GY + EAL F +R++ ++ + +L C ++
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------ 440
++ ++ HG + + SN+ +S +++D Y KCG + SA+ F +M+ +
Sbjct: 196 QLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGY 255
Query: 441 ------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFE 481
++ VSW A++ GY R+G + A+ F +M +P +FTF
Sbjct: 256 AKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFS 315
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES-SS 540
+ L A A+I+SL GKQIH ++IR N + +L+++Y+K LE + RVF+
Sbjct: 316 SCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDK 375
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D ++ N+MI + G +AL++ M K + P+ T IL AC H G V+ +++
Sbjct: 376 QDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRW 435
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
F+SM ++GI+P EHY C+I L R G KEL + MPF P + I CR +G
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHG 495
Query: 661 YATLGEWAARRLNELNP 677
LG+ AA L +L+P
Sbjct: 496 NEELGKKAAEELIKLDP 512
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 204/402 (50%), Gaps = 8/402 (1%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+++V + K ++ AR +FD + ++ VSWN +V Y GN EA+ F ++ R I+
Sbjct: 117 NNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIK 176
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
F+FA L AC Q HG ++ F + V+ S+ + Y KCG++E A+
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D+ ++I WT+++SGYA G + A +LF EMPE+N +SW A++AGY R AL
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLAL 296
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
D M +Q T L A ++ ++ GK++HG++ R + N V+++L+DMY
Sbjct: 297 DLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMY 356
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
K G+L ++ F ++D V WN +++ A+ G +A+ +M ++ P++ T
Sbjct: 357 SKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTL 416
Query: 481 ETLLAACANISSLEQG-KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+L AC++ +E+G + +++ + L+++ + C + + +E
Sbjct: 417 VVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMP 476
Query: 540 -SLDVIICNSMILGFC----HNERGREALEVFGLMKKEGIKP 576
D I N+ ILG C + E G++A E + E P
Sbjct: 477 FEPDKHIWNA-ILGVCRIHGNEELGKKAAEELIKLDPESSAP 517
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 228/525 (43%), Gaps = 110/525 (20%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESN 67
+ +++LS+ + K S+ +++ + + + + L A L Q C +K++ + + + +
Sbjct: 13 VARSLLSRHATKAELSQAVSR-LESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRH 71
Query: 68 L-VTFYPTPPVFLLNRAIECYGKCGNLDDA------------------------------ 96
L +T + P L N I Y KCG DA
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVR 131
Query: 97 -RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
R +FD MPERD SWN M+ Y Q+G L F ++ SG+ N+ ++A +L + +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVK 191
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ---------- 205
+L +++Q HG ++ GF NV+L S++DAY KC M A+R FD++
Sbjct: 192 SRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 206 ---------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
KN VSW ++ Y+ G+G A+ +F KM+ ++P
Sbjct: 252 ISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQ 311
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FTF++ L A + ++S G QIHG +I+ + + +V SL +MY K G LE + +
Sbjct: 312 FTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRI 371
Query: 305 -PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
D+++ + W +++S A G +A ++ ++M + V
Sbjct: 372 CYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRV---------------------- 409
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE-------VHGFIHRNDYSSNIFVSNA 416
++ TL +ILN C+ ++ G HG + ++ +
Sbjct: 410 ---------HPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYA------C 454
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
L+D+ + G + +M DK WNA+L G R +EE
Sbjct: 455 LIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAIL-GVCRIHGNEE 498
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 51 LCASSK--AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE-MPERD 107
LCAS+ ++ +++ ++ P + + I+ Y K G+L+ + +F ++D
Sbjct: 318 LCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQD 377
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELGVSKQL 165
WN M+ A Q+G + L++ DM V N+ T +L + + +E GV +
Sbjct: 378 CVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGV-RWF 436
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN 224
+ V+ G + + L+D G+ + +++ + WN I+ + GN
Sbjct: 437 ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGN 496
Query: 225 ---GKEAVVMFFKMLREDIRP 242
GK+A K+ E P
Sbjct: 497 EELGKKAAEELIKLDPESSAP 517
>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 272/530 (51%), Gaps = 35/530 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ N ++ Y + G+L AR +F+EM RD SWN+++ Y+ NG+ LE++ ++
Sbjct: 68 LYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIYYELRI 127
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+G+ + T ++VL + L + + +HGL+ K G +VI+ + L+ Y K + D
Sbjct: 128 AGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYFKFGRLMD 187
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+R+F+ + K+ VSWN ++ Y +E++ +F +M++ RP T + L AC
Sbjct: 188 AQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR-FRPDLLTITSVLRACGL 246
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G +H I++ E D + + Y KCG L +R D+ R+ +SW ++
Sbjct: 247 LRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTL 306
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++GY S E +LF +M K D
Sbjct: 307 INGYIQSRSYGEGVKLFKKM--------------------------------KMDLKPDS 334
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T +L++ L++ ++GKE+H + + + S++ VSNAL+DMY KCGN++ + F
Sbjct: 335 ITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFEN 394
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
M + RD V+WN ++ + A S+M+ E P T +L C+ I++ Q
Sbjct: 395 M-KVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQ 453
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK++H + +E V AL+E+Y+KC L+Y IRVF++ + DV+ +++ +
Sbjct: 454 GKEVHACTFKFGFESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGM 513
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
G++AL F M++ GI PDHI F I+ AC H G+V+ L FD M+
Sbjct: 514 YGEGKKALRAFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEGLACFDHMK 563
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 248/480 (51%), Gaps = 37/480 (7%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE--ELELGVSKQLHGL 168
WN+++ A T NG + L+L+ M V + T+ +V+ + A + E+G Q H L
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+ GF ++ + ++LVD Y + + AR +F+++ +++ VSWN ++ Y G EA
Sbjct: 61 EIGFGF--DLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEA 118
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +++++ ++P NFT ++ L AC L + EG IHG++ K+ D ++ L M
Sbjct: 119 LEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSM 178
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y K GRL DA+ + ++ ++ +SW +++ GY E+ +LF EM +R
Sbjct: 179 YFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR--------- 229
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
R D +T+ +L C L +++ GK VH +I R+
Sbjct: 230 ------------------FRP-----DLLTITSVLRACGLLRDLEFGKFVHDYILRSGIE 266
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
++ SN ++D Y KCG+L ++R F ++ + RD VSWN ++ GY + E + F +
Sbjct: 267 FDVTASNIVIDTYAKCGDLLASRKAFDRI-KCRDSVSWNTLINGYIQSRSYGEGVKLFKK 325
Query: 469 MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
M+ + +P TF TLL+ ++ E GK+IHC + + ++ ++V ALV++Y+KC +
Sbjct: 326 MKMDLKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNV 385
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ +++VF+ D++ N++I E A + M+ E + PD T GIL C
Sbjct: 386 KDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPIC 445
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 230/466 (49%), Gaps = 38/466 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P +++L + + C A+ E + + V + N + Y K G L DA+
Sbjct: 131 KPDNFTL-SSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYFKFGRLMDAQ 189
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F++M +D SWN ++ Y Q +++LF +M + +T +VLR+
Sbjct: 190 RVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR-FRPDLLTITSVLRACGLLR 248
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+L K +H I++ G +V + ++D Y KC + +R+ FD I+ +++VSWN ++
Sbjct: 249 DLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLIN 308
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ + + E V +F KM + D++P + TF L + L+ G +IH + K+ F+
Sbjct: 309 GYIQSRSYGEGVKLFKKM-KMDLKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDS 367
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D VV +L +MY KCG ++D+ + + R+I++W +I++ + A + ++M
Sbjct: 368 DLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMR 427
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+I D TL IL +C+ ++ + GKE
Sbjct: 428 NEELIP-------------------------------DMGTLLGILPICSLIAAKRQGKE 456
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + S + V NAL++MY KC NL+ I ++ + +D V+W A+++ Y G
Sbjct: 457 VHACTFKFGFESTVPVGNALIEMYSKCSNLKYC-IRVFEDMKTKDVVTWTALVSAYGMYG 515
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
+ ++A+ +F+EM+ P F ++ AC++ S+E+G + CF
Sbjct: 516 EGKKALRAFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEG--LACF 559
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN+V+ G +A+ + +M+ + +P +TF +++ ACA + E G + V+
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ ALV++Y + L A VF+E + D++ NS+I G+ N EALE
Sbjct: 61 EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALE 120
Query: 565 VFGLMKKEGIKPDHITFHGILLAC-----IHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
++ ++ G+KPD+ T +L AC + EG V + K G+ +
Sbjct: 121 IYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEV------IHGLVEKLGMNIDVIMSNG 174
Query: 620 MIKLYCRYGYMKELEDFVNRM 640
++ +Y ++G + + + N+M
Sbjct: 175 LLSMYFKFGRLMDAQRVFNKM 195
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 271/552 (49%), Gaps = 72/552 (13%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR-----RMFDDIQNKNAVSWNVIVR 217
KQLH +++ G + S + C + + + ++FD I N +WN ++R
Sbjct: 47 KQLHAHMLRTGLFFD---PPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103
Query: 218 RYLVAGNGKEAVVMFFKMLREDIR-PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ + + +++F +ML E R P ++TF + A + +SS G IHG+++K F
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + SL Y G L+ S Y + F+++
Sbjct: 164 SDLFISNSLIHFYSSLGDLD---------------------SAYLV----------FSKI 192
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
E++++SWN+M++G+ + +EAL M+ ++VT+ +L+ CA +++ G+
Sbjct: 193 VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGR 252
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ----------------- 439
+I RN N+ +SNA+LDMY KCG+L AR F +M +
Sbjct: 253 WACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVG 312
Query: 440 -------------RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLL 484
R D +WNA+++ Y + G+ +EA+ F E+Q T+P++ T + L
Sbjct: 313 DYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTL 372
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
AACA + +++ G IH ++ + ++N +L+++Y+KC LE A+ VF DV
Sbjct: 373 AACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVF 432
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ ++MI G + GR A+++F M++ +KP+ +TF +L AC H G V FF+ M
Sbjct: 433 VWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQM 492
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
R YG++P +HY CM+ + R G ++E + + +MP P+ + + CR G L
Sbjct: 493 RPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVEL 552
Query: 665 GEWAARRLNELN 676
E A RL E +
Sbjct: 553 AEMACSRLLETD 564
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 267/515 (51%), Gaps = 14/515 (2%)
Query: 48 LFQLCASSKAI--VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
L CA+ K + + A L + L F+ P L A +LD A +FD++P
Sbjct: 36 LIDKCANKKHLKQLHAHMLRTGL--FFDPPSATKLFTAC-ALSSPSSLDYACKVFDQIPR 92
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQ 164
+ +WN ++ A+ + P + L +F+ M H S N T+ V++++ E L +
Sbjct: 93 PNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQA 152
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG+++K F ++ + +SL+ Y + A +F I K+ VSWN ++ ++ G+
Sbjct: 153 IHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGS 212
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA+ +F +M E+ RP T L AC+ G I + + + ++ +
Sbjct: 213 PEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNA 272
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+ +MYVKCG LEDAR L D+ +E++I+SWT+++ GYA G AR +F+ MP ++ +W
Sbjct: 273 MLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAW 332
Query: 345 NAMLAGYTRSLLWKEALDFV--FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
NA+++ Y ++ KEAL + K TK ++VTL L CA L + +G +H +I
Sbjct: 333 NALISSYQQNGKPKEALAIFRELQLNKNTKP-NEVTLASTLAACAQLGAMDLGGWIHVYI 391
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ N ++ +L+DMY KCG+L A FY + +RRD W+A++ G A G A
Sbjct: 392 KKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSV-ERRDVFVWSAMIAGLAMHGHGRAA 450
Query: 463 MTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GALV 519
+ FS+MQ + +P+ TF LL AC++ +++G+ + +R Y + + +V
Sbjct: 451 IDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGR-LFFNQMRPVYGVVPGSKHYACMV 509
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
++ + CLE A+ + ++ + +LG C
Sbjct: 510 DILGRAGCLEEAVELIEKMPIVPSASVWGALLGAC 544
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 261/508 (51%), Gaps = 40/508 (7%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
KQ+H ++ L S ++D + A +F+ + N ++NV++R
Sbjct: 50 KQIHAQMLINSIPKPNFLLSKIIDLKD----LAYASLVFNQLTKPNIYAFNVMLRGLATT 105
Query: 223 GNGKE-AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ V +++K+ ++ NFT+ AC + G H ++ K +GD+ V
Sbjct: 106 WKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYV 165
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY +CG + G+A R++F+EM +R++
Sbjct: 166 NHSLITMYARCGEM-----------------------GFA--------RKVFDEMGDRDL 194
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SWN+M++GY++ KEA+ MR+ + D++TL +L C L ++ +G+ V GF
Sbjct: 195 VSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGF 254
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ N ++ +AL+DMY KCG+L SAR F M +D V+WNA++TGYA+ G S E
Sbjct: 255 VLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPN-KDVVTWNAIITGYAQNGASNE 313
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F+ M + P + T +L+AC+ I +L+ GK + + +V AL++
Sbjct: 314 AIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALID 373
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG--IKPDH 578
+Y KC L+ A+RVF+ + + N+MI + + +EAL +F M K+ ++P+
Sbjct: 374 MYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPND 433
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
ITF G+L AC+H G V Q F+SM +G++P++EHY CM+ L R G + E D +
Sbjct: 434 ITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIK 493
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+MP P +L + C++ A +GE
Sbjct: 494 KMPGKPDEIVLGSLLGACQRRRNADVGE 521
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 146/570 (25%), Positives = 260/570 (45%), Gaps = 76/570 (13%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+L L L K+ +++ + ++ P FLL++ I+ +L A +F++
Sbjct: 31 TLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDL----KDLAYASLVFNQ 86
Query: 103 MPERDGGSWNAML-GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
+ + + ++N ML G T +EL+ + G+ AN TY + + L
Sbjct: 87 LTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVH 146
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
K H L+ K G G+ + SL+ Y +C M AR++FD++ +++ VSWN ++ Y
Sbjct: 147 GKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSK 206
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G KEA+ +F +M E P T + L AC L G + G +++ E + +
Sbjct: 207 MGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYM 266
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY KCG ++IS AR +F+ MP ++V
Sbjct: 267 GSALIDMYGKCG---------------DLIS----------------ARRVFDSMPNKDV 295
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++WNA++ GY ++ EA+ MR+ D+VT+ +L+ C+ + + +GK V
Sbjct: 296 VTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETH 355
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+++V++AL+DMY KCG+L A F M +++VSWNA+++ A GQ++E
Sbjct: 356 ASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPH-KNEVSWNAMISALAFHGQAQE 414
Query: 462 AMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
A++ F M + +P+ TF +L+AC + +++G+Q+ +E + G +
Sbjct: 415 ALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQL--------FESMNLSFGLV 466
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+V C ++ R G + E + L+KK KPD
Sbjct: 467 PKVEHYSCMVDLCARA-----------------GLLY--------EAWDLIKKMPGKPDE 501
Query: 579 ITFHGILLACIHEGNVKLA---LQFFDSMR 605
I +L AC N + +Q F M
Sbjct: 502 IVLGSLLGACQRRRNADVGERVIQLFLEME 531
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
ML S L L L +T K+ Q +L++ + K++H + N
Sbjct: 1 MLKTRPTSFLPPYHLPLSNLNFQTQKEHHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINS 60
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS- 465
F+ + ++D+ +L A + F Q++ + + ++N +L G A + +
Sbjct: 61 IPKPNFLLSKIIDL----KDLAYASLVFNQLT-KPNIYAFNVMLRGLATTWKKYDFCVEL 115
Query: 466 -FSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ + + FT+ L AC N+ L GK HC V + + + +L+ +Y +
Sbjct: 116 YYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYAR 175
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C + +A +VF E D++ NSMI G+ +EA+ +F M++EG +PD +T +
Sbjct: 176 CGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSV 235
Query: 585 LLACIHEGNVKLA 597
L AC G++ L
Sbjct: 236 LGACGDLGDLGLG 248
>gi|302809930|ref|XP_002986657.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
gi|300145545|gb|EFJ12220.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
Length = 662
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 191/685 (27%), Positives = 317/685 (46%), Gaps = 60/685 (8%)
Query: 3 GNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASS-KAIVEA 61
GN + K S S P+P K L SL A+L + C+S+ + + A
Sbjct: 7 GNTHFLFKAFFSSDS-LPSPPKVLPPR-------------SLLANLMRECSSTTRDLATA 52
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R + S +V+ L N+ ++ Y KCG+L DAR + D MP R +W A++ AY +
Sbjct: 53 RMIHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLDAMPARGKLAWTAIISAYVHS 112
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
G + + LF + GV + +++ +L + A + ++ +HG IV+ G +I+
Sbjct: 113 GDFHQAIYLFHCLLLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVA 172
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++L+ Y K + + ++F+ + +N VSW V++ Y G EA+ +F M E +R
Sbjct: 173 NALMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIASYARLGELAEAMRLFRSMQLEGVR 232
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P TF++ L S IH I+ F VV + M +CG L A +
Sbjct: 233 PNEITFSSTLVLFSGSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARV 292
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNVISWNAMLAGYTRSL 355
ER+ ISW +++ A G LF EM P+R ++ ++L+ ++L
Sbjct: 293 FHSMAERDEISWNVMINAAAEEGEAPRVASLFMEMMAEGRRPDR--ATFLSILSSMEKNL 350
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+ F L+LN I + Y S++ V+N
Sbjct: 351 VDPPVPPF---------------YQLVLNC----------------IAESGYQSSLQVTN 379
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETR 474
AL+ Y KCG++ AR F +S D +S A++ +++R Q ++A+ F + R
Sbjct: 380 ALVSFYGKCGDVEGARRVFRSISSP-DVISCTALIAAFSQRAQFQDALVVFRRLLHSGVR 438
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
++ TF LL++C SL G IH ++ + ++ V ALVE+Y+ C L+ A R
Sbjct: 439 ANQVTFLELLSSC---RSLSDGLWIHSQIVASGFQSEVDVAAALVEMYSGCGNLKQAKRA 495
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLACIHEGN 593
+ + ++++CN I N AL++F M+++G KPD IT + +L AC H G
Sbjct: 496 YNAVAVKNLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPDGITLNAVLSACAHGGL 555
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V Q+F M+C Y + +HY C+I L R G + E MPF P +
Sbjct: 556 VSQGCQYFAGMKCDYQLTCNSQHYSCLIDLLGRAGRLDIAEKVTTSMPFPPDQSVRMAFL 615
Query: 654 DKCRKNGYATLGEWAARRLNELNPW 678
CR + G AARR+ +L+P+
Sbjct: 616 GACRTHHDKERGSEAARRVLQLDPF 640
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 287/540 (53%), Gaps = 16/540 (2%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH L VK G + + L+ Y K M A+++FD+I +N +W +++ + AG+
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+ +F +M + P +T ++ L CS ++ G +H +++ + D V+ S
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+ ++Y+KC E A L + +E +++SW ++ Y +G + ++ ++F +P ++V+SW
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
N ++ G + + AL+ ++ M + + VT + L + + LS +++G+++HG + +
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWF------------YQMSQRRDK---VSWNAV 449
+ S+ F+ ++L++MY KCG + A I ++S + K VSW ++
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610
Query: 450 LTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFVIRNCY 508
++GY G+ E+ + +F M E T T+++ACAN LE G+ +H +V + +
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH 670
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
I+ +L+++Y+K L+ A VF++S+ ++++ SMI G+ + +G A+ +F
Sbjct: 671 RIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEE 730
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M +GI P+ +TF G+L AC H G ++ ++F M+ Y I P +EH M+ LY R G
Sbjct: 731 MLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAG 790
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
++ + ++F+ + + + + CR + +G+W + L ++ P P + + +N
Sbjct: 791 HLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSN 850
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 227/449 (50%), Gaps = 50/449 (11%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y K N+ A+ LFDE+P+R+ +W ++ + + G LF +M G
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
NQ T ++VL+ + + L + K +H +++ G +V+L +S++D Y KC V A R+
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN---------------- 244
F+ + + VSWN+++ YL AG+ ++++ MF ++ +D+ N
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHAL 507
Query: 245 ---------------FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
TF+ AL S LS G Q+HG+++K F+ D + SL EMY
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMY 567
Query: 290 VKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
KCGR++ A +L D P +++ R AR + E P+ ++SW +M+
Sbjct: 568 CKCGRMDKASIILRDVP--LDVL-------------RKGNARVSYKE-PKAGIVSWGSMV 611
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
+GY + +++ L LM + +D T+ I++ CA ++ G+ VH ++ + +
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHR 671
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ +V ++L+DMY K G+L A + F Q S + V W ++++GYA GQ A+ F E
Sbjct: 672 IDAYVGSSLIDMYSKSGSLDDAWMVFRQ-SNEPNIVMWTSMISGYALHGQGMHAIGLFEE 730
Query: 469 M-QWETRPSKFTFETLLAACANISSLEQG 496
M P++ TF +L AC++ +E+G
Sbjct: 731 MLNQGIIPNEVTFLGVLNACSHAGLIEEG 759
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 199/469 (42%), Gaps = 95/469 (20%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V L N ++ Y KC + A LF+ M E D SWN M+GAY + G ++L++F + +
Sbjct: 425 VVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPY 484
Query: 137 SGV---------------------------------SANQITYANVLRSSAEELELGVSK 163
V SA + A +L SS +ELG +
Sbjct: 485 KDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELG--R 542
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI-----QNKNA--------- 209
QLHG+++K GF + + SSLV+ Y KC M A + D+ + NA
Sbjct: 543 QLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKA 602
Query: 210 --VSWNVIVRRYLVAGNGKEAVVMFFKMLRE----DIRPLNFTFANALFACSFLSSPYEG 263
VSW +V Y+ G ++ + F M+RE DIR T + AC+ G
Sbjct: 603 GIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIR----TVTTIISACANAGILEFG 658
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+H + KI D V SL +MY K G L+DA + Q +E NI+ WTS++SGYA+
Sbjct: 659 RHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALH 718
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G+ A LF EM + +I ++VT +L
Sbjct: 719 GQGMHAIGLFEEMLNQGIIP-------------------------------NEVTFLGVL 747
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRR 441
N C+ I+ G + ++ Y N V + +++D+Y + G+L + + ++
Sbjct: 748 NACSHAGLIEEGCRYFRMM-KDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISH 806
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA-ACAN 489
W + L+ R ++ E SEM + PS LL+ CA+
Sbjct: 807 LTSVWKSFLSS-CRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCAS 854
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 17/230 (7%)
Query: 51 LCASSKAIVE-ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP----- 104
+ ASS + VE R+L ++ F F+ + +E Y KCG +D A + ++P
Sbjct: 530 ILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLR 589
Query: 105 ---------ERDGG--SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
E G SW +M+ Y NG L+ F M V + T ++ +
Sbjct: 590 KGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
A L + +H + K G + + SSL+D Y K + DA +F N V W
Sbjct: 650 ANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWT 709
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++ Y + G G A+ +F +ML + I P TF L ACS EG
Sbjct: 710 SMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEG 759
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 244/467 (52%), Gaps = 8/467 (1%)
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EAV + +++ + P + L C + EG Q+H I K + L
Sbjct: 105 REAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRL 159
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCG L DA + D+ R++ SW ++SGY G +AR LF++MP R+ SW
Sbjct: 160 LDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWT 219
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTT-KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
A+++G + +EAL+ LM+K ++ T+ L A + + MGK++HG I R
Sbjct: 220 AIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMR 279
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
S+ V +LLDMY KCG++ AR F +M + RD VSW ++ Y + G+ EE
Sbjct: 280 MGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKM-EERDVVSWTTMIHTYLKNGRREEGFA 338
Query: 465 SFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F M P+ FTF +L ACA++++ + GKQIH +++R ++ ALV +Y+
Sbjct: 339 LFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYS 398
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC +E A VF+ D+ S+++G+ + + +AL F L+ K G KPD I F G
Sbjct: 399 KCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIG 458
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H G V L++F S++ K+G+ ++HY C+I L R G E E +N MP
Sbjct: 459 VLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIK 518
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
P + + CR +G L + AA+ L E+ P P + N +
Sbjct: 519 PDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIY 565
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 216/472 (45%), Gaps = 52/472 (11%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K + H+K+ + + L + A ++V+A K+ +V + N I Y
Sbjct: 139 KQVHAHIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVH----RDLCSWNIMISGY 194
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITY 146
K GN + AR LFD+MP RD SW A++ Q+ P LEL+ L H +N+ T
Sbjct: 195 VKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTI 254
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
++ L +SA L + K++HG I++ G + ++ SL+D YGKC + +AR +FD ++
Sbjct: 255 SSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEE 314
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ VSW ++ YL G +E +F ++ +I P +FTFA L AC+ L++ G QI
Sbjct: 315 RDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQI 374
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H ++++ F+ +L MY KCG +E+A+ + + + ++ SWTS++ GYA G+
Sbjct: 375 HAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQ- 433
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+AL F L+ K+ D + +L+ C
Sbjct: 434 ------------------------------HDKALHFFELLLKSGTKPDGIAFIGVLSAC 463
Query: 387 A-------GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
A GL KE HG D+ + I +D+ + G A +M
Sbjct: 464 AHAGLVDKGLEYFHSIKEKHGLTRTIDHYACI------IDLLARAGQFTEAESIINEMPI 517
Query: 440 RRDKVSWNAVLTGYARRGQSE---EAMTSFSEMQWETRPSKFTFETLLAACA 488
+ DK W A+L G G E A S E++ E + T + A+
Sbjct: 518 KPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAG 569
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 250/486 (51%), Gaps = 37/486 (7%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+R +F I N SWN + R Y + E + ++ MLR P N++F L AC+
Sbjct: 80 SRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACAR 139
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
LS ++G +IH +K+ D V +L + CG +E
Sbjct: 140 LSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVE-------------------- 179
Query: 317 VSGYAISGRIREARELFNEMPE--RNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKD 373
AR +F+ +P R+V+SWN+M++GY +S ++ AL F L+ +
Sbjct: 180 -----------AARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLS 228
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+VTL L+VC L + +GK++HG + + ++FV ++L+DMY KCG + AR
Sbjct: 229 PDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKV 288
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F ++ R + V W +++ GYA+ +EA+ F EMQ T +L+AC + +
Sbjct: 289 FDRIPHR-NTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGA 347
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L QG+ IH + RN E+++ R AL+ +Y+KC ++ A+ +F + D+ +++I G
Sbjct: 348 LAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISG 407
Query: 553 FCHNERGREALEVFGLMKK-EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
N +AL +F M+ I+P+ ITF G+L AC H G V L +F++M Y +
Sbjct: 408 LAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLT 467
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P +EHY CM+ L R + E E F+ +P P V + R + CR +G L E+AA++
Sbjct: 468 PGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQ 527
Query: 672 LNELNP 677
+ EL P
Sbjct: 528 IEELEP 533
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 247/507 (48%), Gaps = 70/507 (13%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+R LF ++ + + SWN M AY+++ FP T+ L+ M +G + ++ VL++ A
Sbjct: 80 SRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACAR 139
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN--KNAVSWN 213
L +++H +K G +V ++++L+ A+ C + AR +FD + ++ VSWN
Sbjct: 140 LSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWN 199
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ YL + + A+ +F+++L + + P T +AL C L G +IHG+
Sbjct: 200 SMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTG 259
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F D V SL +MY KCG++EDAR + D+ RN + WTS+++GYA S +EA EL
Sbjct: 260 SGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIEL 319
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F EM + G+ D T+ +L+ C +
Sbjct: 320 FREM----------QIGGFA---------------------ADAATIACVLSACGHWGAL 348
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
G+ +H + RN ++ NAL+ MY KCG+++ A F+ ++Q D SW+AV++G
Sbjct: 349 AQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQ-PDIFSWSAVISG 407
Query: 453 YARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
A G+S++A+ FS+M+ + RP++ TF +L AC + FV + Y
Sbjct: 408 LAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGG----------FVDKGLYYF 457
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
N A+ ++Y +E+ C +LG R +E ++
Sbjct: 458 N-----AMTQIYNLTPGIEH-------------YGCMVDLLG-----RANLLVEAEKFIR 494
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLA 597
I+PD + + +L AC + GN++LA
Sbjct: 495 TLPIQPDVVIWRSLLFACRNHGNIELA 521
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 153/301 (50%), Gaps = 4/301 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +YS + + + CA + + R++ S+ + VF+ N I + CG ++ AR
Sbjct: 125 PDNYS-FPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARA 183
Query: 99 LFDEMPE--RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAE 155
+FD +P RD SWN+M+ Y Q+ L++F ++ G +S +++T + L
Sbjct: 184 VFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGR 243
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L + K++HGL GF +V + SSL+D Y KC + DAR++FD I ++N V W +
Sbjct: 244 LGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSM 303
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y + KEA+ +F +M T A L AC + +G IH +
Sbjct: 304 IAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSI 363
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D +L MY KCG ++ A + + +I SW++++SG A++G +A LF++
Sbjct: 364 EMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQ 423
Query: 336 M 336
M
Sbjct: 424 M 424
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 182/605 (30%), Positives = 291/605 (48%), Gaps = 44/605 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + Y +CG+ D A +F+ M RD SWN ++ + NG L F + +G
Sbjct: 86 NSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGF 145
Query: 140 SANQITYANVLRSSAEELELGVSKQ---LHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
N T V+++ LG LHG ++K GF +++SL+ Y M
Sbjct: 146 EPNISTMVLVIQACRI---LGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MEC 201
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACS 255
AR +FD++ K+ ++W+V++ YL + + MF KM L I P + L AC+
Sbjct: 202 ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACA 261
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
G +HG++I F+ D V SL +MY KC +DA
Sbjct: 262 SSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKC---KDAG---------------- 302
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A ++FNE+ +RN +SWN+ML+G+ + + EA + MRK + D
Sbjct: 303 ------------SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETD 350
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+VTL IL +C K +H + R +N V +AL+D Y KC + A F
Sbjct: 351 EVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFA 410
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+M +RRD VSW+ +++G+A G+ +EA+ + EM + +P+ T LL AC+ + L+
Sbjct: 411 RM-RRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELK 469
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+ K H IR + V A+V++Y+KC + + R F + + +++ ++MI +
Sbjct: 470 RSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYG 529
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N EAL +F MK+ G+KP+ +T +L AC H G V+ L F SM + G+ P
Sbjct: 530 MNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGF 589
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFN--PTVPMLRKIFDKCRKNGYATLGEWAARRL 672
EHY CM+ + R G + + + MP N + + CR G LG+ A R+
Sbjct: 590 EHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRV 649
Query: 673 NELNP 677
EL P
Sbjct: 650 LELEP 654
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 219/472 (46%), Gaps = 43/472 (9%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLV 221
K LH ++K+GF + +S++ Y +C A +F+ ++ ++++VSWN+++ +L
Sbjct: 67 KSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLD 126
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G + F P T + AC L + ++G+ +HG +IK F V
Sbjct: 127 NGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSV 186
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MYV +E AR L D+ E+++I+W+ ++ GY
Sbjct: 187 QNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGY--------------------- 224
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK----DIDQVTLGLILNVCAGLSEIKMGKE 397
L W+E + + RK + D V + +L CA ++ G+
Sbjct: 225 -------------LQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRL 271
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG + + ++FV N+L+DMY KC + SA F ++SQ R+ VSWN++L+G+
Sbjct: 272 VHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQ-RNNVSWNSMLSGFVLNE 330
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EA + S M+ E + T +L C K IHC +IR E N +
Sbjct: 331 NYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLS 390
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL++ Y KC +E A VF DV+ ++MI GF H + EA+ V+ M ++ +KP
Sbjct: 391 ALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKP 450
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
+ IT +L AC +K + ++ + + G ++ ++ +Y + G
Sbjct: 451 NVITIINLLEACSVTAELKRS-KWAHGVAIRQGFASEVTVGTAVVDMYSKCG 501
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 162/320 (50%), Gaps = 4/320 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CASS+ + R + ++ +F+ N I+ Y KC + A +F+E+ +R+
Sbjct: 256 VLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRN 315
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN+ML + N L M V +++T N+L+ + K +H
Sbjct: 316 NVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHC 375
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++++RG N ++ S+L+DAY KC ++ A +F ++ ++ VSW+ ++ + G E
Sbjct: 376 VMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDE 435
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ ++ +M R+ ++P T N L ACS + HGV I+ F + V ++ +
Sbjct: 436 AIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVD 495
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVIS 343
MY KCG + +R DQ +NI++W+++++ Y ++G EA LF EM N ++
Sbjct: 496 MYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVT 555
Query: 344 WNAMLAGYTRSLLWKEALDF 363
++LA + L +E L
Sbjct: 556 TLSVLAACSHGGLVEEGLSL 575
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 17/323 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ H F C S ++ R E+N +L+ I+ Y KC ++ A +F M
Sbjct: 364 FVHPFH-CKSIHCVMIRRGSEAN---------ELVLSALIDAYAKCYLIEIAWEVFARMR 413
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SW+ M+ + G P + ++ +M+ V N IT N+L + + EL SK
Sbjct: 414 RRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKW 473
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HG+ +++GF V + +++VD Y KC + +RR FD + KN V+W+ ++ Y + G
Sbjct: 474 AHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGL 533
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLG 283
EA+ +F +M R ++P T + L ACS EG+ + +++ + E
Sbjct: 534 AHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYS 593
Query: 284 SLTEMYVKCGRLEDARGLLDQ--PDERNIIS-WTSIVSG---YAISGRIREARELFNEMP 337
+ +M + G+L+ A ++ + +N S W S++S Y ++ +EA E+
Sbjct: 594 CMVDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELE 653
Query: 338 ERNVISWNAMLAGYTRSLLWKEA 360
N + + Y LW +A
Sbjct: 654 PSNSAGYLVASSMYAADGLWDDA 676
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 5/241 (2%)
Query: 357 WKEALDFVFLMRKT-TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
W+E + ++K + +D IL + LS + GK +H + + + S + N
Sbjct: 28 WQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-RHGKSLHACLIKQGFDSFTSIGN 86
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-R 474
+++ Y +CG+ A F M + RD VSWN ++ G+ G + F+ +
Sbjct: 87 SIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFE 146
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P+ T ++ AC + + G +H ++I++ + + +L+ +Y +E A +
Sbjct: 147 PNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAREL 205
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGN 593
F E DVI + MI G+ E + L++F ++ GI+PD + +L AC +
Sbjct: 206 FDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRD 265
Query: 594 V 594
V
Sbjct: 266 V 266
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 168/599 (28%), Positives = 280/599 (46%), Gaps = 37/599 (6%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
L + + G + DA P D N ++ + G P L + M +G
Sbjct: 46 LKSLVLSHAAAGRMHDALAAVRSSP--DAFLHNVVIRGFADAGLPEAALAAYRAMLAAGA 103
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN-VILESSLVDAYGKCMVMTDAR 198
++ T+ V++ A L + H ++ G G+ V +SL+ Y K ++ DA
Sbjct: 104 RPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAE 163
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFL 257
R+FD + ++ V+WN +V Y+ G G A+ F +M ++ AL AC
Sbjct: 164 RVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLD 223
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S+ +G ++H +I+ E D V SL +MY KCG
Sbjct: 224 SALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGA----------------------- 260
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
I A +F MP R V++WN M+ GY + +EA D M+ ++ V
Sbjct: 261 --------IASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVV 312
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T +L CA G+ VHG++ R+ + ++ + ALL+MY K G ++S+ F QM
Sbjct: 313 TAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQM 372
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ + VSWN ++ Y + EA+T F E+ P FT ++ A + L Q
Sbjct: 373 TNK-TLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQC 431
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+Q+H +++R Y N + A++ +Y +C + + ++F + + DVI N++I+G+ +
Sbjct: 432 RQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIH 491
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
+G+ ALE+F MK G++P+ TF +L AC G F+ M+ YGIIPQ+EH
Sbjct: 492 GQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEH 551
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
Y CM L R G ++E+ F+ +P PT + + R + E+AA R+ EL
Sbjct: 552 YGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFEL 610
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 212/453 (46%), Gaps = 37/453 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+ + CA A+ E R S + V+ N + Y K G + DA +FD MP R
Sbjct: 113 VVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR 172
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQ 164
D +WN+M+ Y NG L+ F +M H G V + + L + + L ++
Sbjct: 173 DIVTWNSMVDGYVSNGLGALALDCFREM-HEGLQVQHDGVGIIAALAACCLDSALMQGRE 231
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H +++ G +V + +SL+D Y KC + A MF + ++ V+WN ++ Y + G
Sbjct: 232 VHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGC 291
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+EA F +M E + T N L AC+ S G +HG + + F V+ +
Sbjct: 292 PEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETA 351
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L EMY K G+++ + + Q + ++SW
Sbjct: 352 LLEMYSKVGKVKSSETIFGQMTNKTLVSW------------------------------- 380
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
N M+A Y ++ EA+ + D T+ ++ L ++ +++H +I R
Sbjct: 381 NNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVR 440
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
DY N V+NA++ MY +CG++ S+R F +M+ +D +SWN ++ GYA GQ + A+
Sbjct: 441 LDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAG-KDVISWNTIIMGYAIHGQGKIALE 499
Query: 465 SFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
FSEM+ +P++ TF ++L AC+ ++G
Sbjct: 500 MFSEMKSNGLQPNESTFVSVLTACSVSGMADEG 532
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 150/332 (45%), Gaps = 7/332 (2%)
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
S S+V +A +GR+ +A P+ N ++ G+ + L + AL M
Sbjct: 45 SLKSLVLSHAAAGRMHDALAAVRSSPD--AFLHNVVIRGFADAGLPEAALAAYRAMLAAG 102
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVH-GFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D+ T +++ CA L ++ G+ H I S ++ N+LL Y K G + A
Sbjct: 103 ARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADA 162
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACA 488
F M R D V+WN+++ GY G A+ F EM + + LAAC
Sbjct: 163 ERVFDGMPVR-DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACC 221
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
S+L QG+++H +VIR+ E +V +L+++Y KC + A +F S V+ N
Sbjct: 222 LDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNC 281
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI G+ N EA + F MK EG + + +T +L AC + L + +
Sbjct: 282 MIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACA-QTESSLYGRSVHGYVTRS 340
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+P + ++++Y + G +K E +M
Sbjct: 341 QFLPHVVLETALLEMYSKVGKVKSSETIFGQM 372
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 130/281 (46%), Gaps = 14/281 (4%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L CA +++ + R + + P V L +E Y K G + + +F +M +
Sbjct: 316 NLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNK 375
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
SWN M+ AY + LFL++ + + + T + V+ + L +Q+H
Sbjct: 376 TLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMH 435
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
IV+ + N ++ ++++ Y +C + +R++FD + K+ +SWN I+ Y + G GK
Sbjct: 436 SYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGK 495
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG-------MQIHGVIIKIDFEGDD 279
A+ MF +M ++P TF + L ACS EG + +G+I +I+
Sbjct: 496 IALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEH---- 551
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
G +T++ + G L + ++ P W S+++
Sbjct: 552 --YGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTA 590
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 279/587 (47%), Gaps = 34/587 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G +D+A + D N M+ + G P L + M G ++ T+ V+
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ A L + HG+++K G +V +SLV Y K ++ DA R+FD + ++ V
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+WN +V Y+ G G A+ F +M +++ + AL AC S +G +IHG
Sbjct: 175 TWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGY 234
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+I+ E D V SL +MY KCG + A
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGE-------------------------------VAYA 263
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R +F MP R V++WN M+ GY + EA D MR ++ VT +L CA
Sbjct: 264 RSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQT 323
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
G+ VHG++ R + ++ + ALL+MY K G + S+ F +++ + VSWN +
Sbjct: 324 ESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANK-TLVSWNNM 382
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ Y + EA+T F E+ P FT T++ A + SL +QIH ++I Y
Sbjct: 383 IAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGY 442
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
N + A++ +Y + + + +F + S DVI N+MI+G+ + +G+ ALE+F
Sbjct: 443 AENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDE 502
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
MK G++P+ TF +L AC G V F+ M +YG+IPQ+EHY CM L R G
Sbjct: 503 MKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREG 562
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
++E+ F+ MP +PT + + R + E+AA R+ +L
Sbjct: 563 DLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 208/451 (46%), Gaps = 34/451 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + E R ++ V+ N + Y K G ++DA +FD MP RD
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLH 166
+WN M+ Y NG L F +M+ + V + + L + E+ K++H
Sbjct: 173 IVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
G +++ G ++ + +SL+D Y KC + AR +F + + V+WN ++ Y +
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA F +M E ++ T N L AC+ S G +HG +++ F V+ +L
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
EMY K G++E + + + + ++SW N
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSW-------------------------------NN 381
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
M+A Y ++ EA+ + D T+ ++ L ++ +++H +I
Sbjct: 382 MIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLG 441
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
Y+ N + NA+L MY + G++ ++R F +M +D +SWN ++ GYA GQ + A+ F
Sbjct: 442 YAENTLIMNAVLHMYARSGDVVASREIFDKMVS-KDVISWNTMIMGYAIHGQGKTALEMF 500
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQG 496
EM++ +P++ TF ++L AC+ +++G
Sbjct: 501 DEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 5/286 (1%)
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
P +R S S+V A GR+ EA E + + N M+ G+ + L AL
Sbjct: 38 PPKRG--SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAY 95
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M + D+ T +++ CA L + G+ HG + + +++ N+L+ Y K
Sbjct: 96 RGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKL 155
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFET 482
G + A F M R D V+WN ++ GY G A+ F EM E +
Sbjct: 156 GLVEDAERVFDGMPVR-DIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIA 214
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LAAC S QGK+IH +VIR+ E ++ +L+++Y KC + YA VF
Sbjct: 215 ALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRT 274
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
V+ N MI G+ NER EA + F M+ EG++ + +T +L AC
Sbjct: 275 VVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAAC 320
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L CA +++ + R + +V P V L +E YGK G ++ + +F ++ +
Sbjct: 315 NLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANK 374
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
SWN M+ AY + LFL++ + + + T + V+ + L +Q+H
Sbjct: 375 TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIH 434
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I+ G+ N ++ ++++ Y + + +R +FD + +K+ +SWN ++ Y + G GK
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG-------MQIHGVIIKIDFEG 277
A+ MF +M ++P TF + L ACS EG +Q +G+I +I+ G
Sbjct: 495 TALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYG 552
>gi|449442080|ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
gi|449490224|ref|XP_004158542.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
Length = 619
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 170/562 (30%), Positives = 280/562 (49%), Gaps = 38/562 (6%)
Query: 36 SDEPVSYSLYAHLFQL-CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
S++ VS L +L + SS+++ + R + + ++ + + +++ N + Y + G L
Sbjct: 80 SNQSVSGCLSPYLIGVWLRSSRSVKKLRAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLV 139
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DAR +FDEMP R +W A++ Y L LF D SGV AN + +L A
Sbjct: 140 DARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCA 199
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
+ L+ + +Q+HG+IVK G GN+I++S+++ Y +C ++ A F+ ++ ++ V W
Sbjct: 200 KRLDFELGRQIHGVIVK-GNRGNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTS 258
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ G G+EA+ MF ML ++ P F+ + L AC G Q+HG+IIK
Sbjct: 259 MITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKI 318
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ D V SL +MY KC G + ++RE+F+
Sbjct: 319 IKNDVFVGTSLVDMYAKC-------------------------------GNLADSREVFD 347
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
M RN ++W +++AGY R L +EAL+ LM++ + +T+ IL C +
Sbjct: 348 GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 407
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G+EVH I +N + +NI + + L+ Y KC N A + Q+ RD VSW A+++G A
Sbjct: 408 GREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASM-VLQLMPLRDVVSWTAIISGCA 466
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G EA+ M E P+ FT+ + L ACA + ++ QGK IH + NV
Sbjct: 467 HLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVF 526
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL+ +Y KC + A +VF +++ +MIL + N REAL++ M+ EG
Sbjct: 527 VGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEG 586
Query: 574 IKPDHITFHGILLACIHEGNVK 595
+ D + AC G+VK
Sbjct: 587 FEVDDYILGTVYGAC---GDVK 605
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 232/493 (47%), Gaps = 38/493 (7%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
LRSS +L + +H I++ + + ++L+ +Y + ++ DAR++FD++ ++
Sbjct: 97 LRSSRSVKKL---RAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSV 153
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
V+W I+ Y+ +EA+ +F ++ + F L C+ G QIHGV
Sbjct: 154 VTWTAIINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGV 213
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I+K + RG N+I ++I+ YA I A
Sbjct: 214 IVKGN------------------------RG--------NLIVDSAIIYFYAQCKDISSA 241
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
F M R+V+ W +M+ ++ L +EA+ M ++ ++ +L C
Sbjct: 242 FVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEE 301
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
E+K+G+++HG I + +++FV +L+DMY KCGNL +R F M + R+ V+W ++
Sbjct: 302 RELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGM-RNRNTVTWTSI 360
Query: 450 LTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ GYAR G EEA+ F M+ + P+ T ++L AC +I + G+++H +++N +
Sbjct: 361 IAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF 420
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ N+ LV Y KC A V + DV+ ++I G H EALE
Sbjct: 421 QTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKN 480
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M +EG++P+ T+ L AC V L + S K + + +I +Y + G
Sbjct: 481 MIEEGVEPNSFTYSSTLKACAKMEAV-LQGKMIHSSANKTSALSNVFVGSALIYMYAKCG 539
Query: 629 YMKELEDFVNRMP 641
Y+ E + MP
Sbjct: 540 YVTEASQVFDSMP 552
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 149/306 (48%), Gaps = 3/306 (0%)
Query: 33 HLKSDE--PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
++ SDE P +S+ + + C + + R+L ++ VF+ ++ Y KC
Sbjct: 278 NMLSDEFLPNEFSV-CSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKC 336
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
GNL D+R +FD M R+ +W +++ Y + G L LF M + AN +T ++L
Sbjct: 337 GNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSIL 396
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
R+ +++H IVK F N+ + S+LV Y KC A + + ++ V
Sbjct: 397 RACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVV 456
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW I+ G+ EA+ M+ E + P +FT+++ L AC+ + + +G IH
Sbjct: 457 SWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSA 516
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
K + V +L MY KCG + +A + D RN++SW +++ YA +G REA
Sbjct: 517 NKTSALSNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREAL 576
Query: 331 ELFNEM 336
+L M
Sbjct: 577 KLMYRM 582
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 155/496 (31%), Positives = 251/496 (50%), Gaps = 35/496 (7%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACS 255
R +F I+ N WN ++R LV+ + + + F+ ++R E P NFTF L AC+
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRG-LVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACA 123
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G++IH +++K F+ D V SL +Y KC
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC----------------------- 160
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
G + +A ++F+++P++NV+SW A+++GY ++EA+D + + D
Sbjct: 161 --------GYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPD 212
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
T+ +L+ C L ++ G+ +H I N+FV +L+DMY KCGN+ AR F
Sbjct: 213 SFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFD 272
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
M ++ D VSW A++ GYA G +EA+ F +MQ E +P +T +L+ACA + +LE
Sbjct: 273 GMPEK-DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALE 331
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
G+ + V RN + N V AL+++Y KC + A VFK D ++ N++I G
Sbjct: 332 LGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLA 391
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N + + +FG ++K GIKPD TF G+L C H G V ++F+SM + + P +
Sbjct: 392 MNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSI 451
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CM+ L R G + E + MP + + CR + L E A ++L E
Sbjct: 452 EHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511
Query: 675 LNPWAPFQFKITTNRF 690
L PW + + +N +
Sbjct: 512 LEPWNSGNYVLLSNIY 527
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 219/423 (51%), Gaps = 35/423 (8%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
+LLN + C + + R LF ++ + + WN M+ N +E + M
Sbjct: 47 YLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSE 106
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G N T+ VL++ A L+L + ++H L+VK GF +V +++SLV Y KC + DA
Sbjct: 107 GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDA 166
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++FDDI +KN VSW I+ Y+ G +EA+ MF ++L ++ P +FT L AC+ L
Sbjct: 167 HKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQL 226
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G IH I+++ + V SL +MY KCG +E AR + D E++I+SW +++
Sbjct: 227 GDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
GYA++G +EA +LF +M NV D
Sbjct: 287 QGYALNGLPKEAIDLFLQMQRENVKP-------------------------------DCY 315
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW-FYQ 436
T+ +L+ CA L +++G+ V G + RN++ N + AL+D+Y KCG++ +R W ++
Sbjct: 316 TVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSM--SRAWEVFK 373
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+ +D+V WNA+++G A G + + F +++ +P TF LL C + +++
Sbjct: 374 GMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDE 433
Query: 496 GKQ 498
G++
Sbjct: 434 GRR 436
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 189/383 (49%), Gaps = 16/383 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + Y KCG L+DA +FD++P+++ SW A++ Y G +++F +
Sbjct: 147 VFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLE 206
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
++ + T VL + + +L + +H I++ G NV + +SLVD Y KC M
Sbjct: 207 MNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEK 266
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD + K+ VSW +++ Y + G KEA+ +F +M RE+++P +T L AC+
Sbjct: 267 ARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACAR 326
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L + G + G++ + +F + V+ +L ++Y KCG + A + E++ + W +I
Sbjct: 327 LGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAI 386
Query: 317 VSGYAISGRIREARELFNEM------PERNVISWNAMLAGYTRSLLWKEALDFVFLMRK- 369
+SG A++G ++ + LF ++ P+ N ++ +L G T + L E + M +
Sbjct: 387 ISGLAMNGYVKISFGLFGQVEKLGIKPDGN--TFIGLLCGCTHAGLVDEGRRYFNSMYRF 444
Query: 370 --TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
T I+ + L AGL + E H I +N V ALL R +
Sbjct: 445 FSLTPSIEHYGCMVDLLGRAGLLD-----EAHQLIRNMPMEANAIVWGALLGACRIHRDT 499
Query: 428 RSARIWFYQMSQRRDKVSWNAVL 450
+ A + Q+ + S N VL
Sbjct: 500 QLAELALKQLIELEPWNSGNYVL 522
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 414 SNALLDMYRKCG----NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
N LL+M +C + R F+Q+ Q + WN ++ G ++A+ + M
Sbjct: 45 DNYLLNMILRCSFDFSDTNYTRFLFHQIKQP-NIFLWNTMIRGLVSNDCFDDAIEFYGLM 103
Query: 470 QWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ E P+ FTF +L ACA + L+ G +IH V++ ++ +V + +LV +Y KC L
Sbjct: 104 RSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYL 163
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
E A +VF + +V+ ++I G+ + REA+++F + + + PD T +L AC
Sbjct: 164 EDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSAC 223
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G++ ++ + G++ + ++ +Y + G M++ + MP
Sbjct: 224 TQLGDLNSG-EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275
>gi|302142722|emb|CBI19925.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 269/532 (50%), Gaps = 60/532 (11%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
NR ++ Y +C ++ +A+ LF+EMP+R+ SWN M+ Y ++G G++LELF M H
Sbjct: 82 NRLLQMYSRCNSMREAQQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPH---- 137
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
K F NV+ + + K + ARR+
Sbjct: 138 ------------------------------KDAFSWNVV-----ISGFAKEGNLEVARRL 162
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL------NFTFANALFAC 254
F+++ KN ++WN ++ Y G KEAV +F + + PL F A + AC
Sbjct: 163 FNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL---SLNPLERFCGDTFVLATVVGAC 219
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L + G QIH I+ + E D V+ SL +Y KCG ++ A +L+ E + S +
Sbjct: 220 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 279
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+++SGYA GR+ +AR +F V+ WN+M++GY + EAL+ MR+
Sbjct: 280 ALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 339
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D T +L+ C+ L I G +VH +++ ++++I + +AL+DMY KC A F
Sbjct: 340 DYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 399
Query: 435 YQMSQRRDK----------VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
+ Q D +SWN+++ G+++ EA+ F EM + R KF+ +
Sbjct: 400 SDL-QAYDTILLNSMITVLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGV 458
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
++ACA+ISSLE G+QI E + + +LV+ Y KC +E+ ++F D
Sbjct: 459 ISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDE 518
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
+ NSM++G+ N G EAL VF M+ G++P ITF G+L AC H G V+
Sbjct: 519 VPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVE 570
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 223/468 (47%), Gaps = 59/468 (12%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P F N I + K GNL+ AR LF+EMP ++G +WN+M+ Y NG P + LF
Sbjct: 136 PHKDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFK 195
Query: 133 DMNHSGVS---ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
D++ + + + A V+ + L KQ+H IV + +L SSLV+ YG
Sbjct: 196 DLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYG 255
Query: 190 KCM-------------------------------VMTDARRMFDDIQNKNAVSWNVIVRR 218
KC M DARR+F N V WN ++
Sbjct: 256 KCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISG 315
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ EA+ +F M R+ ++ TFA+ L ACS L +G+Q+H + K+ F D
Sbjct: 316 YVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTND 375
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
++ +L +MY KC R +DA L + I S+++
Sbjct: 376 IIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMIT-------------------- 415
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+ISWN+M+ G++++ EALD M K +D+ +L +++ CA +S +++G+++
Sbjct: 416 -VLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQI 474
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ +S +L+D Y KCG + R F +M + D+V WN++L GYA G
Sbjct: 475 FARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 533
Query: 459 SEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
EA+ F +M+ +P+ TF +L+AC + +E+G++ C+ I+
Sbjct: 534 GIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRK--CYFIK 579
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 225/508 (44%), Gaps = 105/508 (20%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
+ A L +C+ S Y G +H + +K + +G+ L +MY +C + +A+ L ++
Sbjct: 44 SLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 103
Query: 305 PDERNIISWTS-------------------------------IVSGYAISGRIREARELF 333
+RN SW + ++SG+A G + AR LF
Sbjct: 104 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 163
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI----------DQVTLGLIL 383
NEMP +N I+WN+M+ GY + KEA+ KD+ D L ++
Sbjct: 164 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLF-------KDLSLNPLERFCGDTFVLATVV 216
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR------------ 431
C L + GK++H I ++ + + ++L+++Y KCG++ SA
Sbjct: 217 GACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAF 276
Query: 432 -----IWFYQMSQRRDK-------------VSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
I Y R + V WN++++GY ++ EA+ F+ M+ +
Sbjct: 277 SLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKG 336
Query: 474 RPSKF-TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+ TF ++L+AC+ + ++QG Q+H V + + +++ ALV++Y+KC + A
Sbjct: 337 VQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDAC 396
Query: 533 RVFKESSSLDVIICNSMI----------LGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
++F + + D I+ NSMI +GF N EAL++F M K G++ D +
Sbjct: 397 KLFSDLQAYDTILLNSMITVLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLA 456
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE----CMIKLYCRYGYMKELEDFVN 638
G++ AC +++L Q F I LE + ++ YC+ G ++ +
Sbjct: 457 GVISACASISSLELGEQIF-----ARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFD 511
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGE 666
RM + VP + GYAT G
Sbjct: 512 RMMKSDEVPWNSMLM------GYATNGH 533
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 140/281 (49%), Gaps = 10/281 (3%)
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
++++ P F L+ I Y CG ++DAR +F WN+M+ Y N
Sbjct: 264 NHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEAL 323
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
LELF +M GV + T+A+VL + + + Q+H + K GF ++I++S+LV
Sbjct: 324 EALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALV 383
Query: 186 DAYGKCMVMTDARRMFDDIQNKNA----------VSWNVIVRRYLVAGNGKEAVVMFFKM 235
D Y KC DA ++F D+Q + +SWN ++ + EA+ +F +M
Sbjct: 384 DMYSKCRRPDDACKLFSDLQAYDTILLNSMITVLISWNSMIVGFSQNACPIEALDLFCEM 443
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ +R F+ A + AC+ +SS G QI I E D ++ SL + Y KCG +
Sbjct: 444 NKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLV 503
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
E R L D+ + + + W S++ GYA +G EA +F++M
Sbjct: 504 EHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQM 544
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 10/232 (4%)
Query: 42 YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
YS +A + C++ I + ++ +++ T + + + ++ Y KC DDA LF
Sbjct: 341 YSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFS 400
Query: 102 EMPERDGG----------SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
++ D SWN+M+ ++QN P L+LF +MN G+ ++ + A V+
Sbjct: 401 DLQAYDTILLNSMITVLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVIS 460
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
+ A L + +Q+ G + I+ +SLVD Y KC ++ R++FD + + V
Sbjct: 461 ACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVP 520
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
WN ++ Y G+G EA+ +F +M ++P + TF L AC EG
Sbjct: 521 WNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEG 572
>gi|359485428|ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Vitis vinifera]
Length = 921
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 171/632 (27%), Positives = 310/632 (49%), Gaps = 28/632 (4%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLD 94
EP ++ +A L CAS K + + +L++ +V F+ P + + +G+ G +D
Sbjct: 151 EPTQHT-FAGLLS-CASLK-LSQGFQLQAQMVKSGLFHADP--YAGTALLSLFGRNGCID 205
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ F+EMP+++ +WN ++ + GF ++ LF ++ +G ++ ++ VL A
Sbjct: 206 EVVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFA 265
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E +L + +Q+H L++K GF V + +SL++ Y KC + A +MF+ ++ VSWN
Sbjct: 266 SEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNT 325
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ + + + +F KM + + P TF + + +C+ L G IH +I+
Sbjct: 326 MIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNK 385
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E + V +L + Y KC LE A D+ DE+N++ W +++ GY S + + L
Sbjct: 386 IESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGY--SNKCFSSVSLLK 443
Query: 335 EMPE----RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
M + N S++A L SL+++ +MR + + V+ LI S
Sbjct: 444 RMLQLGYCPNEFSFSAALKS---SLVFELQQLHCLIMRMGYQQNEYVSSALI------TS 494
Query: 391 EIKMGKEVHGFIHRNDYSSNIFV--SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
K G I + + V SNA+ +Y K G + F + + D VSWN
Sbjct: 495 YAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLF-SLLEEPDIVSWNI 553
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
++ AR G +E F MQ + P +T +LL+ C + +L G IH F+I+
Sbjct: 554 LIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTD 613
Query: 508 YEI-NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
++ + L+++Y KC C+E ++++F + ++I ++I N EAL++F
Sbjct: 614 FKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERNIITWTALISALGVNGYANEALKLF 673
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M+ G KPD + + AC H G VK ++ F M+ GI P ++HY C++ L R
Sbjct: 674 REMESLGFKPDGVALVAVFSACRHGGLVKEGMELFWQMKKSCGIEPNIDHYHCVVDLLAR 733
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
G+++E E ++ MPF P + R + C++
Sbjct: 734 CGHLQEAEQVISNMPFPPNALIWRSFLEGCKR 765
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 266/559 (47%), Gaps = 49/559 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYP--TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
C + + E + L + VT T P+FL N I Y G L AR +F EM +R+
Sbjct: 61 CKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNVV 120
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
S+N ++G Y++NG LF +M G Q T+A +L S L+L QL +
Sbjct: 121 SYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLL--SCASLKLSQGFQLQAQM 178
Query: 170 VKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
VK G F + ++L+ +G+ + + F+++ KN V+WN ++ + G +E+
Sbjct: 179 VKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYGFSEES 238
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F +++R +F L + G Q+H ++IK F+ + VL SL M
Sbjct: 239 MFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINM 298
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
YVKC + A + + R+++SW +++ A S R + ELF +M V+
Sbjct: 299 YVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLP----- 353
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
++ T ++N C L + G+ +H + RN
Sbjct: 354 --------------------------NETTFVSVINSCTNLQILVFGEYIHAKVIRNKIE 387
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
SN+FV +AL+D Y KC NL SA F ++ + ++ V WNA++ GY+ + S ++
Sbjct: 388 SNVFVGSALVDFYAKCDNLESAHCCFDEIDE-KNVVCWNALILGYSNKCFSSVSLLK-RM 445
Query: 469 MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+Q P++F+F L + S + + +Q+HC ++R Y+ N AL+ Y K +
Sbjct: 446 LQLGYCPNEFSFSAALKS----SLVFELQQLHCLIMRMGYQQNEYVSSALITSYAKNGII 501
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGR--EALEVFGLMKKEGIKPDHITFHGILL 586
A+ +F +S+ +++ S + +N+ G+ ++F L++ +PD ++++ ++
Sbjct: 502 SDAL-IFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLE----EPDIVSWNILIA 556
Query: 587 ACIHEGNVKLALQFFDSMR 605
AC G+ K + F M+
Sbjct: 557 ACARNGDYKEVFELFKHMQ 575
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 210/479 (43%), Gaps = 72/479 (15%)
Query: 22 PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN 81
PSK L + L P + + + + C + + +V + + ++ VF+ +
Sbjct: 336 PSKVLELFLKMSLDGVLP-NETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGS 394
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
++ Y KC NL+ A FDE+ E++ WNA++ Y+ F ++ L M G
Sbjct: 395 ALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCF--SSVSLLKRMLQLGYCP 452
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA---- 197
N+ +++ L+SS EL +QLH LI++ G+ N + S+L+ +Y K +++DA
Sbjct: 453 NEFSFSAALKSSL-VFEL---QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFD 508
Query: 198 ----------------------------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+ +F ++ + VSWN+++ G+ KE
Sbjct: 509 AASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVF 568
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE-GDDVVLGSLTEM 288
+F M I P N+T + L C+ L + G IHG IIK DF+ D V L +M
Sbjct: 569 ELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDM 628
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KCG +E + + ++ ERNII+WT+++S ++G EA +LF EM
Sbjct: 629 YGKCGCIESSLKIFNKIIERNIITWTALISALGVNGYANEALKLFREM------------ 676
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DY 407
E+L F D V L + + C +K G E+ + ++
Sbjct: 677 ----------ESLGF---------KPDGVALVAVFSACRHGGLVKEGMELFWQMKKSCGI 717
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
NI + ++D+ +CG+L+ A M + + W + L G R +E + F
Sbjct: 718 EPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFLEGCKRWKTAENQESIF 776
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/653 (26%), Positives = 307/653 (47%), Gaps = 48/653 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN----------LD 94
Y+ + CA +K + + + +L+ + N + Y C N D
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYD 169
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
R +FD M ++ +WN ++ Y + G F M + + +++ NV + A
Sbjct: 170 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVA 229
Query: 155 EELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ + +GL++K G + ++ + SS + Y + + +RR+FD +N W
Sbjct: 230 TSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVW 289
Query: 213 NVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
N ++ Y+ E++ +F + + ++I TF A A S L G Q HG +
Sbjct: 290 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVS 349
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K E V++ SL MY +CG ++ + G+ ER+++SW +++S + +G
Sbjct: 350 KNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNG------- 402
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
L E L V+ M+K ID +T+ +L+ + L
Sbjct: 403 ------------------------LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 438
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR-SARIWFYQMSQRRDKVSWNAVL 450
++GK+ HGF+ R +++ L+DMY K G +R S +++ RD+ +WN+++
Sbjct: 439 KEIGKQTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMI 497
Query: 451 TGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+GY + G +EE F +M + RP+ T ++L AC+ + S++ GKQ+H F IR +
Sbjct: 498 SGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLD 557
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
NV ALV++Y+K ++YA +F ++ + + +MILG+ + G A+ +F M
Sbjct: 558 QNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 617
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
++ GIKPD I F +L AC + G V L+ F+ MR Y I P EHY C+ + R G
Sbjct: 618 QELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGR 677
Query: 630 MKELEDFVNRMPFNPTVPML-RKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
+ E +FV + + L + CR +G L E + RL +L+ F
Sbjct: 678 VNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERLAKLDKGKNF 730
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 262/552 (47%), Gaps = 54/552 (9%)
Query: 70 TFYP---TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
TF P TP + + + GN AR LFD +P+ WN ++ + N P
Sbjct: 29 TFSPPTLTPQTPSIRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHE 88
Query: 127 TLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
L + M + + TY++ L++ AE L K +H +++ + ++ +SL
Sbjct: 89 ALLFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSL 148
Query: 185 VDAYGKCMVMTDA----------RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
++ Y C+ + R++FD+++ KN V+WN ++ Y+ G EA F
Sbjct: 149 MNMYVSCLNAPGSELDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAI 208
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI--DFEGDDVVLGSLTEMYVKC 292
M+R +I+P +F N A + S + +G+++K+ ++ D V+ S MY +
Sbjct: 209 MMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAEL 268
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE-MPERNVISWNAMLAGY 351
G LE +R + D ERNI W +++ Y + + E+ ELF E + + ++S
Sbjct: 269 GDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS-------- 320
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
D+VT L + +GL ++++G++ HGF+ +N I
Sbjct: 321 -----------------------DEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPI 357
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
+ N+L+ MY +CG ++ + F+ M + RD VSWN +++ + + G +E + EMQ
Sbjct: 358 VIINSLMVMYSRCGFVQKSFGVFHSM-RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 416
Query: 472 ET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+ + T LL+A +N+ + E GKQ H F+IR + + L+++Y K +
Sbjct: 417 QGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGM-NSYLIDMYAKSGLIRI 475
Query: 531 AIRVFKES--SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ ++F+ S + D NSMI G+ N E VF M ++ I+P+ +T IL AC
Sbjct: 476 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPAC 535
Query: 589 IHEGNVKLALQF 600
G+V L Q
Sbjct: 536 SQVGSVDLGKQL 547
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 237/471 (50%), Gaps = 50/471 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYP--TPPVFLLNRAIECYGKCGNLDDA 96
PVS+ ++F A+S++I +A ++ +F+++ AI Y + G+L+ +
Sbjct: 218 PVSF---VNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESS 274
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITY--ANVLRSS 153
R +FD ER+ WN M+G Y QN ++ELFL+ + + ++++T+ A S
Sbjct: 275 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSG 334
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
+++ELG +Q HG + K +++ +SL+ Y +C + + +F ++ ++ VSWN
Sbjct: 335 LQQVELG--RQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWN 392
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK- 272
++ ++ G E +++ ++M ++ + T L A S L + G Q HG +I+
Sbjct: 393 TMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQ 452
Query: 273 -IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD--ERNIISWTSIVSGYAISGRIREA 329
I FEG + L +MY K G + ++ L + ER+ +W S++SGY +G E
Sbjct: 453 GIQFEGMN---SYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEET 509
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+F +M E+N I NA VT+ IL C+ +
Sbjct: 510 FLVFRKMLEQN-IRPNA------------------------------VTVASILPACSQV 538
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ +GK++HGF R N+FV++AL+DMY K G ++ A F Q ++ R+ V++ +
Sbjct: 539 GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQ-TKERNSVTYTTM 597
Query: 450 LTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQI 499
+ GY + G E A++ F MQ +P F +L+AC+ +++G +I
Sbjct: 598 ILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKI 648
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 154/330 (46%), Gaps = 17/330 (5%)
Query: 84 IECYGKCGNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I+ Y K G + ++ LF+ ERD +WN+M+ YTQNG T +F M +
Sbjct: 464 IDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRP 523
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +T A++L + ++ + + KQLHG +++ NV + S+LVD Y K + A MF
Sbjct: 524 NAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMF 583
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ +N+V++ ++ Y G G+ A+ +F M I+P F L ACS+
Sbjct: 584 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVD 643
Query: 262 EGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS--WTSIVS 318
EG++I + ++ + + +T+M + GR+ +A + E I+ W S++
Sbjct: 644 EGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 703
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
+ G + A + + + + +GY + L ++ + K +D+V
Sbjct: 704 SCRLHGELELAETVSERLAK---LDKGKNFSGY------EVLLSNMYAEEQNWKSVDRVR 754
Query: 379 LGLI---LNVCAGLSEIKMGKEVHGFIHRN 405
G+ L G S I++ V+ F+ R+
Sbjct: 755 KGMREKGLKKEVGRSGIEVAGHVNCFVSRD 784
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 293/599 (48%), Gaps = 59/599 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N AI + + G D A LF+ MP R SWNAM+ N +LF M +
Sbjct: 53 NIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLV 112
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ + + +R L ++ L + +R +V+ ++++ Y + + +A+ +
Sbjct: 113 SWNVMISGCVRYR----NLRAARLLFDQMPER----DVVSWNAMLSGYAQNGYVKEAKEI 164
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD++ KN++SWN ++ Y+ G ++A +F
Sbjct: 165 FDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES-------------------------- 198
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
K D+E + + YVK RL DARG+ D+ ER+ +SW +++SGY
Sbjct: 199 -----------KADWE--LISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGY 245
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTL 379
A +G + EA+ LF E P R+V +W AM++GY ++ + EA F + K + + +
Sbjct: 246 AQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIA 305
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
G + C + + + E N+ N ++ Y + G++ AR +F +M Q
Sbjct: 306 GYVQ--CKRMDQARELFEAMP-------CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ 356
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R D +SW A++ GYA+ G EEA+ F EM+ + R ++ TF + L+ CA I++LE GKQ
Sbjct: 357 R-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 415
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H V++ E AL+ +Y KC ++ A VF+ +V+ N+MI G+ +
Sbjct: 416 VHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGF 475
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EAL +F MKK GI PD +T G+L AC H G V ++F SM YGI +HY
Sbjct: 476 GKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYT 535
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CMI L R G + + ++ + MPF P + R +G LGE AA+ + E+ P
Sbjct: 536 CMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 594
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 228/458 (49%), Gaps = 42/458 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C S+ AR+L + PT + N I + NL AR LFD+MPERD SW
Sbjct: 90 CLSNDKFYLARQLFEKM----PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSW 145
Query: 112 NAMLGAYTQNGFPGRTLELFLDMN-HSGVSANQITYANVLRSSAEEL-ELGVSKQLHGLI 169
NAML Y QNG+ E+F +M + +S N + A V E+ L SK LI
Sbjct: 146 NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELI 205
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
G + + LVDA G +FD + ++ VSWN ++ Y G EA
Sbjct: 206 SWNCMMGGYVKRNRLVDARG----------IFDRMPERDEVSWNTMISGYAQNGELLEAQ 255
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSP--------YEGMQIHGVIIKIDFEGDDVV 281
+F + P+ F ++ + ++GM E + V
Sbjct: 256 RLF------EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----------EKNSVS 299
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
++ YV+C R++ AR L + +N+ SW ++++GYA +G I +AR F+ MP+R+
Sbjct: 300 WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 359
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
ISW A++AGY +S +EAL M++ + +++ T L+ CA ++ +++GK+VHG
Sbjct: 360 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 419
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + S +V NALL MY KCGN+ A I F + + ++ VSWN ++ GYAR G +E
Sbjct: 420 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE-KEVVSWNTMIAGYARHGFGKE 478
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
A+ F M+ P T +L+AC++ +++G +
Sbjct: 479 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE 516
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 6/272 (2%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P V N I Y + G++ AR FD MP+RD SW A++ Y Q+G+ L LF+
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M G N+ T+ + L + AE L + KQ+HG +VK G + ++L+ Y KC
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ DA +F+ I+ K VSWN ++ Y G GKEA+++F M + I P + T L
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNI 310
ACS +G + + + + + ++ + GRL+DA+ L+ + P E +
Sbjct: 504 ACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 563
Query: 311 ISWTSIVSGYAISGRI----REARELFNEMPE 338
+W +++ I G + A+ +F P+
Sbjct: 564 ATWGALLGASRIHGNTELGEKAAKMIFEMEPD 595
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 83/369 (22%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ +I+ W ++ + +G+ A LFN MP R+ ISWNAM++G + D +L
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSN-------DKFYL 98
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
R+ + + R+ S N+ +S + YR N
Sbjct: 99 ARQLFEKMPT---------------------------RDLVSWNVMISGCV--RYR---N 126
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK--FTFETLL 484
LR+AR+ F QM + RD VSWNA+L+GYA+ G +EA F EM P K ++ +L
Sbjct: 127 LRAARLLFDQMPE-RDVVSWNAMLSGYAQNGYVKEAKEIFDEM-----PCKNSISWNGML 180
Query: 485 AACANISSLEQGKQIH------CFVIRNCYEINVVCRGALVEV----------------- 521
AA +E +++ + NC V R LV+
Sbjct: 181 AAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 240
Query: 522 ----YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
Y + L A R+F+ES DV +M+ G+ N EA VF M ++ +
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----N 296
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
++++ I+ + + A + F++M C+ + + MI Y + G + + +F
Sbjct: 297 SVSWNAIIAGYVQCKRMDQARELFEAMPCQ-----NVSSWNTMITGYAQNGDIAQARNFF 351
Query: 638 NRMPFNPTV 646
+RMP ++
Sbjct: 352 DRMPQRDSI 360
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+ E ++ S + CA A+ +++ +V ++ N + Y KCGN+D
Sbjct: 387 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNID 446
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-S 153
DA +F+ + E++ SWN M+ Y ++GF L LF M +G+ + +T VL + S
Sbjct: 447 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 506
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSW 212
L ++ + + G N + ++D G+ + DA+ + ++ +A +W
Sbjct: 507 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 566
Query: 213 NVIVRRYLVAGN---GKEAVVMFFKM 235
++ + GN G++A M F+M
Sbjct: 567 GALLGASRIHGNTELGEKAAKMIFEM 592
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 164/603 (27%), Positives = 296/603 (49%), Gaps = 39/603 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N I +G C ++++A +FD+M ERD SWN+++ A NG ++LE F M +
Sbjct: 195 VSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRY 254
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + IT + +L L + LHG++VK G NV + +SL+ Y + D
Sbjct: 255 THAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSED 314
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F ++ ++ +SWN ++ ++ GN A+ + +ML+ TF AL AC
Sbjct: 315 AEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN 374
Query: 257 LSSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L E ++I H +I + + ++ +L MY K G +
Sbjct: 375 L----ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMA------------------- 411
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A+ + MP+R+ ++WNA++ G+ + A++ L+R+ ++
Sbjct: 412 ------------AAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVN 459
Query: 376 QVTLGLILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
+T+ +L+ ++ G +H I + FV ++L+ MY +CG+L ++ +
Sbjct: 460 YITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSN-YI 518
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
+ + ++ +WNA+L+ A G EEA+ +M+ + +F+F A N++ L
Sbjct: 519 FDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLL 578
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
++G+Q+H +I++ +E N A +++Y KC ++ R+ + S N +I
Sbjct: 579 DEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISAL 638
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ ++A E F M G++PDH+TF +L AC H G V L +F SM K+G+
Sbjct: 639 ARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTG 698
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+EH C+I L R G + E E+F+N+MP PT + R + C+ +G L AA RL
Sbjct: 699 IEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLF 758
Query: 674 ELN 676
EL+
Sbjct: 759 ELD 761
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 241/503 (47%), Gaps = 37/503 (7%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y K G+++ A+ +FD+MPER+ SWN ++ + + G+ + ++ F M GV +
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 147 ANVLRSSAEELELGVSK-QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
A+++ + + Q+H ++K G +V + +SL+ YG + + +F +I+
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
N VSW ++ Y G KE + ++ ++ R+ + A + +C L G Q
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+ G +IK + V SL M+ C +E
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIE----------------------------- 212
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
EA +F++M ER+ ISWN+++ + +++L++ MR T D +T+ +L V
Sbjct: 213 --EASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPV 270
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C ++ G+ +HG + ++ SN+ V N+LL MY + G A F++M + RD +S
Sbjct: 271 CGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM-RERDLIS 329
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFVI 504
WN+++ + G A+ EM + + + TF T L+AC N+ +L K +H FVI
Sbjct: 330 WNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVI 386
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
N++ ALV +Y K + A RV K D + N++I G N+ A+E
Sbjct: 387 LLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIE 446
Query: 565 VFGLMKKEGIKPDHITFHGILLA 587
F L+++EG+ ++IT +L A
Sbjct: 447 AFNLLREEGVPVNYITIVNLLSA 469
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/611 (24%), Positives = 280/611 (45%), Gaps = 53/611 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVE-ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
P SY + A L C S + E A ++ ++++ VF+ + YG G + +
Sbjct: 56 PSSY-VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVD 114
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F E+ E + SW +++ Y NG + ++ + GV N+ A V+RS +
Sbjct: 115 MVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLV 174
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ + Q+ G ++K G V + +SL+ +G C + +A +FDD++ ++ +SWN I+
Sbjct: 175 DKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIIT 234
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G+ ++++ F +M + T + L C + G +HG+++K E
Sbjct: 235 ASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLES 294
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V SL MY + G+ EDA + + ER++ISW S+++ + +G A EL EM
Sbjct: 295 NVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEML 354
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ T K + VT L+ C L +K+
Sbjct: 355 Q-------------------------------TRKATNYVTFTTALSACYNLETLKI--- 380
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH F+ N+ + NAL+ MY K G++ +A+ ++ RD+V+WNA++ G+A
Sbjct: 381 VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ-RVCKIMPDRDEVTWNALIGGHADNK 439
Query: 458 QSEEAMTSFSEMQWETRPSKF-TFETLLAACANISS-LEQGKQIHCFVIRNCYEINVVCR 515
+ A+ +F+ ++ E P + T LL+A + L+ G IH ++ +E+ +
Sbjct: 440 EPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQ 499
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+ +Y +C L + +F ++ + N+++ H G EAL++ M+ +GI
Sbjct: 500 SSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIH 559
Query: 576 PDHITF---HGIL--LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
D +F H I+ L + EG Q S+ K+G + +Y + G
Sbjct: 560 LDQFSFSVAHAIIGNLTLLDEG------QQLHSLIIKHGFESNDYVLNATMDMYGKCG-- 611
Query: 631 KELEDFVNRMP 641
E++D +P
Sbjct: 612 -EIDDVFRILP 621
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 154/580 (26%), Positives = 258/580 (44%), Gaps = 86/580 (14%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H K+D Y + L +C S++ + R L +V V + N + Y + G
Sbjct: 256 HAKTD----YITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGK 311
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+DA +F +M ERD SWN+M+ ++ NG R LEL ++M + + N +T+ L S
Sbjct: 312 SEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTAL-S 370
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ LE K +H ++ G N+I+ ++LV YGK M A+R+ + +++ V+W
Sbjct: 371 ACYNLE--TLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTW 428
Query: 213 NVIVRRYLVAGNGKE--AVVMFFKMLREDIRPLNF-TFANALFACSFLSSP---YEGMQI 266
N ++ + + KE A + F +LRE+ P+N+ T N L A FLS GM I
Sbjct: 429 NALIGGH---ADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA--FLSPDDLLDHGMPI 483
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H I+ FE + V SL MY +CG L + + D +N +W +I+S A G
Sbjct: 484 HAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGP- 542
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+EAL + MR +DQ + + +
Sbjct: 543 ------------------------------GEEALKLIIKMRNDGIHLDQFSFSVAHAII 572
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQRRDKVS 445
L+ + G+++H I ++ + SN +V NA +DMY KCG + RI + R + S
Sbjct: 573 GNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRI--LPQPRSRSQRS 630
Query: 446 WNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN +++ AR G ++A +F EM RP TF +LL+AC++ +++G
Sbjct: 631 WNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEG-------- 682
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ TK F + ++ +C +LG R + E
Sbjct: 683 ----------LAYFSSMSTK----------FGVPTGIEHCVCIIDLLG-----RAGKLTE 717
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ K + P + + +L AC GN++LA + D +
Sbjct: 718 AENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRL 757
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 206/456 (45%), Gaps = 38/456 (8%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K + A+ +FD + +N SWN ++ ++ G ++A+ F ML +RP ++
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 248 ANALFACSFLSSPYEG-MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
A+ + AC EG Q+H +IK CG D
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIK-------------------CGLACD--------- 93
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+ TS++ Y G + E +F E+ E N++SW +++ GY + KE +
Sbjct: 94 ---VFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRR 150
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
+R+ ++ + ++ C L + +G +V G + ++ + + V+N+L+ M+ C +
Sbjct: 151 LRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDS 210
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLA 485
+ A F M +R D +SWN+++T G E+++ FS+M++ + + T LL
Sbjct: 211 IEEASCVFDDMKER-DTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLP 269
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
C + +L G+ +H V+++ E NV +L+ +Y++ E A VF + D+I
Sbjct: 270 VCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLIS 329
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
NSM+ N ALE+ M + +++TF L AC + +K+ F +
Sbjct: 330 WNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLG 389
Query: 606 CKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ +I ++ +Y ++G M + MP
Sbjct: 390 LHHNLIIG----NALVTMYGKFGSMAAAQRVCKIMP 421
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 152/355 (42%), Gaps = 35/355 (9%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY K G +E A+ + D+ ERN SW +++SG+ G ++A + F M E V + +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK-EVHGFIHRND 406
A ++ C + G +VH + +
Sbjct: 61 AAS-------------------------------LVTACDRSGCMTEGAFQVHAHVIKCG 89
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+ ++FV +LL Y G + + F ++ + + VSW +++ GYA G +E M+ +
Sbjct: 90 LACDVFVGTSLLHFYGTFGWVAEVDMVFKEI-EEPNIVSWTSLMVGYAYNGCVKEVMSVY 148
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
++ + ++ T++ +C + G Q+ VI++ + V +L+ ++ C
Sbjct: 149 RRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNC 208
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
+E A VF + D I NS+I HN ++LE F M+ K D+IT +L
Sbjct: 209 DSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALL 268
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
C N++ + M K G+ + ++ +Y + G ++ E ++M
Sbjct: 269 PVCGSAQNLRWG-RGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM 322
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 184/696 (26%), Positives = 314/696 (45%), Gaps = 83/696 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD-DAR 97
P S ++ A + +CA S + + + ++ F N + Y KCG + DA
Sbjct: 138 PSSVTI-ATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAY 196
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA--- 154
+FD + +D SWNAM+ +NG LF M V N T AN+L A
Sbjct: 197 AVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFD 256
Query: 155 EELELGVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E + +Q+H +++ +V + ++L+ Y K +A +F + ++ VSWN
Sbjct: 257 ENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWN 316
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIK 272
I+ Y + G +++ +F ++ ++ L+ T + L AC+ L + G Q+H I++
Sbjct: 317 TIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILR 376
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F +D G+ ++VS YA G I EA
Sbjct: 377 HPFLFEDTSAGN------------------------------ALVSFYAKCGYIEEAYHT 406
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F+ + +++ISWN++L + L + +M K D VT+ I++ CA L +
Sbjct: 407 FSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRV 466
Query: 393 KMGKEVHGFIHRNDY---SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
K KE+HG+ R+ ++ V NA+LD Y KCGN+ A F +S++R+ V+ N++
Sbjct: 467 KKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSL 526
Query: 450 LTGYARRGQSEEAMTSFSEMQ------WE--------------------------TRPSK 477
++GY G +A FS M W +P
Sbjct: 527 ISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDV 586
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T +L+ C ++S+ +Q H ++IR+ +E ++ +G L++ Y KC + YA ++F+
Sbjct: 587 VTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQS 645
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
S D+++ +MI G+ + +ALE F M GIKPDH+ F IL AC H G +
Sbjct: 646 SVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEG 705
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
L+ FDS+ +G+ P +E + C++ L R G++ E FV ++P + + C+
Sbjct: 706 LKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACK 765
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRFDRY 693
LG A +L FKI N Y
Sbjct: 766 TYHEVELGRIVADKL----------FKIEANDIGNY 791
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 265/558 (47%), Gaps = 77/558 (13%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSG-VSANQI 144
Y KCG LDD LFD+ D WN +L Y+++G +++F M+ SG V + +
Sbjct: 82 YAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSV 141
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC-MVMTDARRMFDD 203
T A VL A L K +HG ++K GF + ++LV Y KC +V DA +FD
Sbjct: 142 TIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDS 201
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE- 262
I +K+ VSWN ++ G KEA +F M++ ++P T AN L C+
Sbjct: 202 IIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAH 261
Query: 263 --GMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
G QIH +++ + D V +L Y+K GR ++A L D R+++SW +I++G
Sbjct: 262 RCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAG 321
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
YA++G ++ +F N++S +L +D VT+
Sbjct: 322 YALNGEWLKSLHVFG-----NLVSLEMLL-------------------------LDSVTM 351
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
IL CA L ++ GK+VH +I R+ + + NAL+ Y KCG + A F M
Sbjct: 352 VSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTF-SMI 410
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
R+D +SWN++L + + ++ M + + RP T T++ CA++ +++ K
Sbjct: 411 SRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVK 470
Query: 498 QIHCFVIRN----CYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILG 552
+IH + IR+ C V A+++ Y+KC +EYA ++F+ S +++ CNS+I G
Sbjct: 471 EIHGYSIRSGSLLCATAPTV-GNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISG 529
Query: 553 -------------------------------FCHNERGREALEVFGLMKKEGIKPDHITF 581
+ N+ +ALE+F ++ +G+KPD +T
Sbjct: 530 YVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTI 589
Query: 582 HGILLACIHEGNVKLALQ 599
++ C +V L Q
Sbjct: 590 MSLIPVCTQMASVHLLRQ 607
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 213/452 (47%), Gaps = 42/452 (9%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A +L+S + L + K LH +VK+G + +L++ Y KC ++ D ++FD
Sbjct: 41 AAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGR 100
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGM 264
+ V WN+++ Y +G V+ F+ + ++ P + T A L C+ + G
Sbjct: 101 CDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGK 160
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE-DARGLLDQPDERNIISWTSIVSGYAIS 323
+HG +IK FE D +L MY KCG + DA + D ++++SW ++++G A +
Sbjct: 161 SVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAEN 220
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G ++EA LF+ LM K + + T+ IL
Sbjct: 221 GLLKEAFSLFS-------------------------------LMMKGSVKPNYATVANIL 249
Query: 384 NVCAGLSE---IKMGKEVHGFIHR-NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
VCA E + G+++H ++ + + S+++ V NALL Y K G + A F+ M
Sbjct: 250 PVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDA 309
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSLEQGK 497
RD VSWN ++ GYA G+ +++ F + T ++L ACA + +L+ GK
Sbjct: 310 -RDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGK 368
Query: 498 QIHCFVIRNCYEINVVCRG-ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
Q+H +++R+ + G ALV Y KC +E A F S D+I NS++ F
Sbjct: 369 QVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEK 428
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
L + +M K I+PD +T I+ C
Sbjct: 429 RHHSRFLSLLHVMLKLDIRPDSVTILTIIHFC 460
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 237/478 (49%), Gaps = 15/478 (3%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVE---ARKLESNLVTFYP--TPPVFLLNRAIECYG 88
+K +Y+ A++ +CAS + R++ S ++ +P + V + N + Y
Sbjct: 234 MKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQ-WPELSADVSVCNALLSFYL 292
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYA 147
K G +A LF M RD SWN ++ Y NG ++L +F ++ + + + +T
Sbjct: 293 KVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMV 352
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
++L + A+ L KQ+H I++ F + ++LV Y KC + +A F I
Sbjct: 353 SILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISR 412
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ +SWN I+ + + + + ML+ DIRP + T + C+ L + +I
Sbjct: 413 KDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEI 472
Query: 267 HGVIIK---IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNIISWTSIVSGYAI 322
HG I+ + V ++ + Y KCG +E A + E RN+++ S++SGY
Sbjct: 473 HGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVG 532
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
G +A +F+ M E ++ +WN M+ Y + ++AL+ ++ D VT+ +
Sbjct: 533 LGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSL 592
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ VC ++ + + ++ HG+I R+ + ++ + LLD Y KCG + A F Q S +D
Sbjct: 593 IPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIGYAYKIF-QSSVDKD 650
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
V + A++ GYA G SE+A+ +FS M +P F ++L+AC++ + +G +I
Sbjct: 651 LVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKI 708
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 189/433 (43%), Gaps = 41/433 (9%)
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACSFLSSPYEGMQIH 267
++W +R V EA+ F L++ +P + A L +CS L + G +H
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
++K V +L MY KCG L+D
Sbjct: 61 SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCH---------------------------- 92
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLILNV 385
+LF++ + + WN +L+GY+RS + VF ++ ++ VT+ +L V
Sbjct: 93 ---KLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPV 149
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA + GK VHG++ ++ + + F NAL+ MY KCG + + +D VS
Sbjct: 150 CARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVS 209
Query: 446 WNAVLTGYARRGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANIS---SLEQGKQIHC 501
WNA++ G A G +EA + FS M+ +P+ T +L CA+ + G+QIH
Sbjct: 210 WNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHS 269
Query: 502 FVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+V++ +V AL+ Y K + A +F + D++ N++I G+ N
Sbjct: 270 YVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWL 329
Query: 561 EALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
++L VFG L+ E + D +T IL AC N++ Q + +
Sbjct: 330 KSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNA 389
Query: 620 MIKLYCRYGYMKE 632
++ Y + GY++E
Sbjct: 390 LVSFYAKCGYIEE 402
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 171/413 (41%), Gaps = 82/413 (19%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y KCG +++A F + +D SWN++L A+ + R L L M +
Sbjct: 388 NALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIR 447
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGNV-ILESSLVDAYGKCMVMTDA 197
+ +T ++ A L + K++HG ++ G C + ++++DAY KC + A
Sbjct: 448 PDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYA 507
Query: 198 RRMFDDIQNK--------------------------------NAVSWNVIVRRYLVAGNG 225
+MF ++ K + +WN++VR Y
Sbjct: 508 NKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCP 567
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A+ +F K+ + ++P T + + C+ ++S + Q HG II+ FE D + G+L
Sbjct: 568 EQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTL 626
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI----------------------- 322
+ Y KCG + A + +++++ +T+++ GYA+
Sbjct: 627 LDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDH 686
Query: 323 ------------SGRIREARELFNEMPERN-----VISWNAMLAGYTRSLLWKEALDFVF 365
+GRI E ++F+ + + + + + ++ R EA FV
Sbjct: 687 VIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFV- 745
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG---FIHRNDYSSNIFVSN 415
K + + G +L C E+++G+ V I ND + I +SN
Sbjct: 746 --TKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSN 796
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 271/526 (51%), Gaps = 46/526 (8%)
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+ N N + ++R Y + + V+M+ +M +RP F ++ S+
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAF-----VYPILIKSA 110
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PD------------ 306
G+ H ++K+ D V ++ +MY + G + AR + D+ PD
Sbjct: 111 GTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 307 --------------------ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
ERN+I+WT++V+GYA + AR F+ MPER+V+SWNA
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
ML+GY ++ L +EAL M + D+ T +++ C+ + + + +H+
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKR 290
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
N FV ALLDMY K G+L SAR F M R+ V+WN+++ GYA+ GQS A+ F
Sbjct: 291 IQLNCFVRTALLDMYAKFGDLDSARKLFNTMPG-RNVVTWNSMIAGYAQNGQSAMAIELF 349
Query: 467 SEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
EM + P + T ++++AC ++ +LE G + F+ N ++++ A++ +Y++
Sbjct: 350 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 409
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C +E A RVF+E ++ DV+ N++I GF + G EA+ + MK+ GI+PD +TF G+
Sbjct: 410 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 469
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G ++ + F+S++ P ++HY CM+ L R G +++ + + RMP P
Sbjct: 470 LTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEP 524
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + + R + LGE AA +L EL P F + +N +
Sbjct: 525 HAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIY 570
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 192/425 (45%), Gaps = 73/425 (17%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMP--ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
F+ N I+ Y + G + AR +FDE+P ER WNAM+ Y + G+ LF M
Sbjct: 131 FVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP 190
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
NVI +++V Y K +
Sbjct: 191 ER---------------------------------------NVITWTAMVTGYAKVKDLE 211
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
ARR FD + ++ VSWN ++ Y G +EA+ +F +M+ I P T+ + ACS
Sbjct: 212 AARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACS 271
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
P + + + + + V +L +MY K G L+ AR L + RN+++W S
Sbjct: 272 SRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNS 331
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++GYA +G+ A ELF EM +K T D
Sbjct: 332 MIAGYAQNGQSAMAIELFKEM----------------------------ITAKKLTP--D 361
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+VT+ +++ C L +++G V F+ N +I NA++ MY +CG++ A+ F
Sbjct: 362 EVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQ 421
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+M+ RD VS+N +++G+A G EA+ S M + P + TF +L AC++ LE
Sbjct: 422 EMAT-RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLE 480
Query: 495 QGKQI 499
+G+++
Sbjct: 481 EGRKV 485
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 138/279 (49%), Gaps = 9/279 (3%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V + Y K +L+ AR FD MPER SWNAML Y QNG
Sbjct: 185 LFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEA 244
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
L LF +M ++G+ ++ T+ V+ + + + ++ L + ++ N + ++L+D
Sbjct: 245 LRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDM 304
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFT 246
Y K + AR++F+ + +N V+WN ++ Y G A+ +F +M+ + + P T
Sbjct: 305 YAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 364
Query: 247 FANALFACSFLSSPYEGMQIHGVI----IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+ + AC L + G + + IK+ G + ++ MY +CG +EDA+ +
Sbjct: 365 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHN----AMIFMYSRCGSMEDAKRVF 420
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ R+++S+ +++SG+A G EA L + M E +
Sbjct: 421 QEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 459
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 34/337 (10%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NH 136
F+ ++ Y K G+LD AR LF+ MP R+ +WN+M+ Y QNG +ELF +M
Sbjct: 296 FVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 355
Query: 137 SGVSANQITYANVLRSSAE--ELELG--VSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
++ +++T +V+ + LELG V + L +K G+ ++++ Y +C
Sbjct: 356 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGH----NAMIFMYSRCG 411
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
M DA+R+F ++ ++ VS+N ++ + G+G EA+ + M I P TF L
Sbjct: 412 SMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLT 471
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNII 311
ACS EG ++ I + + ++ + G LEDA+ +++ P E +
Sbjct: 472 ACSHAGLLEEGRKVFESIKDPAIDH----YACMVDLLGRVGELEDAKRTMERMPMEPHAG 527
Query: 312 SWTSIVSGYAISGRIR----EARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVF 365
+ S+++ I ++ A +LF P+ N I + + A R WK+
Sbjct: 528 VYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGR---WKDVERIRE 584
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
M+K + + T G S ++ G ++H FI
Sbjct: 585 AMKK--GGVKKTT---------GWSWVEYGGKLHKFI 610
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 266/542 (49%), Gaps = 38/542 (7%)
Query: 153 SAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SA + LG + +H IVK L + L++ Y K AR + +N VS
Sbjct: 18 SASSMRLG--RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS 75
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W ++ G+ A+V FF+M RE + P +FTF A A + L P G QIH + +
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K D V S +MY K RL D +AR+
Sbjct: 136 KCGRILDVFVGCSAFDMYCKT-RLRD------------------------------DARK 164
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF+E+PERN+ +WNA ++ +EA++ R+ + +T LN C+
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ +G ++HG + R+ + +++ V N L+D Y KC +RS+ I F +M + + VSW +++
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVA 283
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
Y + + E+A + + + S F ++L+ACA ++ LE G+ IH ++ C E
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ ALV++Y KC C+E + + F E +++ NS+I G+ H + AL +F M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 571 KEGI--KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
G P+++TF +L AC G V+ ++ FDSMR YGI P EHY C++ + R G
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
++ +F+ +MP PT+ + + + CR +G LG AA L +L+P + +N
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Query: 689 RF 690
F
Sbjct: 524 TF 525
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 213/446 (47%), Gaps = 41/446 (9%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+V AR ++ T PP FL N I Y K + + AR + P R+ SW +++
Sbjct: 27 VVHARIVK----TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS-KQLHGLIVKRGFCG 176
QNG L F +M GV N T+ ++ A L L V+ KQ+H L VK G
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS-LRLPVTGKQIHALAVKCGRIL 141
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+V + S D Y K + DAR++FD+I +N +WN + + G +EA+ F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
R D P + TF L ACS GMQ+HG++++ F+ D V L + Y KC ++
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + + +N +SW S+V+ Y + +A L Y RS
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL------------------YLRS-- 301
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
RK + + +L+ CAG++ +++G+ +H + IFV +A
Sbjct: 302 -----------RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 350
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---T 473
L+DMY KCG + + F +M + ++ V+ N+++ GYA +GQ + A+ F EM
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 474 RPSKFTFETLLAACANISSLEQGKQI 499
P+ TF +LL+AC+ ++E G +I
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 12/431 (2%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ AS + V +++ + V VF+ A + Y K DDAR LFDE+PER+
Sbjct: 115 FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNL 174
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+WNA + +G P +E F++ N IT+ L + ++ L L + QLHGL
Sbjct: 175 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 234
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+++ GF +V + + L+D YGKC + + +F ++ KNAVSW +V Y+ ++A
Sbjct: 235 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
V++ + ++ + +F ++ L AC+ ++ G IH +K E V +L +M
Sbjct: 295 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNVI 342
Y KCG +ED+ D+ E+N+++ S++ GYA G++ A LF EM P N +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTK-DIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++ ++L+ +R+ + + MR T + I+++ L M + + F
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM---LGRAGMVERAYEF 471
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQS 459
I + I V AL + R G + + + + K S N VL +A G+
Sbjct: 472 IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRW 531
Query: 460 EEAMTSFSEMQ 470
EA T E++
Sbjct: 532 AEANTVREELK 542
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
LGL+L S +++G+ VH I + D F++N L++MY K + SAR+ +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL-VLR 66
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
++ R+ VSW ++++G A+ G A+ F EM+ E P+ FTF A A++
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GKQIH ++ ++V + ++Y K + A ++F E ++ N+ I
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ R REA+E F ++ P+ ITF L AC ++ L +Q
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL 231
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ + + CA + R + ++ V +F+ + ++ YGKCG ++D+ FDEM
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV--SANQITYANVLRS 152
PE++ + N+++G Y G L LF +M G + N +T+ ++L +
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 256/515 (49%), Gaps = 34/515 (6%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L +K G ++ ++++ Y KC + A +MF + ++AVSWN ++ ++ GN
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ A+ M R ++F + L + + G Q+H +++K+ +EG+ +L
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KC R + +A E+F + RN ++WN
Sbjct: 142 LDMYAKCER-------------------------------VEDAFEVFKSINIRNSVTWN 170
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
A+++GY + A + M +ID T +L + K+ +VH I ++
Sbjct: 171 ALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKH 230
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD--KVSWNAVLTGYARRGQSEEAM 463
+S+ V NA++ Y +CG++ A F + RD VSWN++LTG+++ G SE+A+
Sbjct: 231 GLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDAL 290
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M+ + + F +L +C+++++L+ G+Q+H V+++ +E N +L+ +Y
Sbjct: 291 KFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMY 350
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC +E A + F + I NS+I G+ + RG+ AL++F LMK +K DHITF
Sbjct: 351 SKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFV 410
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V+ F SM YGI P++EHY CMI L R G + E + + MPF
Sbjct: 411 AVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPF 470
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + + CR G L A L EL P
Sbjct: 471 EPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 505
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 204/427 (47%), Gaps = 36/427 (8%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T ++ N I Y KCG + A +F E +RD SWN M+ + G LE
Sbjct: 31 TASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKS 90
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M G + + ++ ++L+ A + V +Q+H ++VK G+ GNV S+L+D Y KC
Sbjct: 91 MKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCER 150
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ DA +F I +N+V+WN ++ Y G+ A + M E + + TFA L
Sbjct: 151 VEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTL 210
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE-RNI-- 310
Q+H I+K D V ++ Y +CG +EDA + D E R++
Sbjct: 211 LDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDH 270
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+SW SI++G++ SG +A + F M + V+
Sbjct: 271 VSWNSILTGFSQSGLSEDALKFFENMRSQYVV---------------------------- 302
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
ID +L C+ L+ +++G++VH + ++ + N FV+++L+ MY KCG + A
Sbjct: 303 ---IDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDA 359
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN 489
R F + + ++WN+++ GYA+ G+ + A+ F M+ + TF +L AC++
Sbjct: 360 RKSF-DATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSH 418
Query: 490 ISSLEQG 496
I +E+G
Sbjct: 419 IGLVEEG 425
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 189/430 (43%), Gaps = 49/430 (11%)
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+RPL+ + + + F + +S + I + ++++ G Y KCG + A
Sbjct: 1 MRPLH-SLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISG-----YAKCGEIRIAS 54
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ + +R+ +SW ++++G+ G ++
Sbjct: 55 KMFGETSQRDAVSWNTMIAGFVNLGN-------------------------------FET 83
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL+F+ M++ +D + G IL A + +++G++VH + + Y N+F +ALLD
Sbjct: 84 ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLD 143
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KC + A F ++ R+ V+WNA+++GYA+ G A M+ E
Sbjct: 144 MYAKCERVEDAFEVFKSINI-RNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDG 202
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK-- 536
TF LL + + Q+H ++++ + A++ Y++C +E A RVF
Sbjct: 203 TFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGA 262
Query: 537 -ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
E+ LD + NS++ GF + +AL+ F M+ + + DH F +L +C ++
Sbjct: 263 IETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQ 322
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
L Q + K G P +I +Y + G +++ + P + ++ IF
Sbjct: 323 LGQQ-VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF-- 379
Query: 656 CRKNGYATLG 665
GYA G
Sbjct: 380 ----GYAQHG 385
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 182/605 (30%), Positives = 291/605 (48%), Gaps = 44/605 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
N + Y +CG+ D A +F+ M RD SWN ++ + NG L F + +G
Sbjct: 86 NSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGF 145
Query: 140 SANQITYANVLRSSAEELELGVSKQ---LHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
N T V+++ LG LHG ++K GF +++SL+ Y M
Sbjct: 146 EPNISTMVLVIQACRI---LGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MEC 201
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACS 255
AR +FD++ K+ ++W+V++ YL + + MF KM L I P + L AC+
Sbjct: 202 ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACA 261
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
G +HG++I F+ D V SL +MY KC +DA
Sbjct: 262 SSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKC---KDAG---------------- 302
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
A ++FNE+ +RN +SWN+ML+G+ + + EA + MRK + D
Sbjct: 303 ------------SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETD 350
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+VTL IL +C K +H + R +N V +AL+D Y KC + A F
Sbjct: 351 EVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFA 410
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+M +RRD VSW+ +++G+A G+ +EA+ + EM + +P+ T LL AC+ + L+
Sbjct: 411 RM-RRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELK 469
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+ K H IR + V A+V++Y+KC + + R F + + +++ ++MI +
Sbjct: 470 RSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYG 529
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N EAL +F MK+ G+KP+ +T +L AC H G V+ L F SM + G+ P
Sbjct: 530 MNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGF 589
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFN--PTVPMLRKIFDKCRKNGYATLGEWAARRL 672
EHY CM+ + R G + + + MP N + + CR G LG+ A R+
Sbjct: 590 EHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRV 649
Query: 673 NELNP 677
EL P
Sbjct: 650 LELEP 654
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 219/472 (46%), Gaps = 43/472 (9%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLV 221
K LH ++K+GF + +S++ Y +C A +F+ ++ ++++VSWN+++ +L
Sbjct: 67 KSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLD 126
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G + F P T + AC L + ++G+ +HG +IK F V
Sbjct: 127 NGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSV 186
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MYV +E AR L D+ E+++I+W+ ++ GY
Sbjct: 187 QNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGY--------------------- 224
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTK----DIDQVTLGLILNVCAGLSEIKMGKE 397
L W+E + + RK + D V + +L CA ++ G+
Sbjct: 225 -------------LQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRL 271
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG + + ++FV N+L+DMY KC + SA F ++SQ R+ VSWN++L+G+
Sbjct: 272 VHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQ-RNNVSWNSMLSGFVLNE 330
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EA + S M+ E + T +L C K IHC +IR E N +
Sbjct: 331 NYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLS 390
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL++ Y KC +E A VF DV+ ++MI GF H + EA+ V+ M ++ +KP
Sbjct: 391 ALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKP 450
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
+ IT +L AC +K + ++ + + G ++ ++ +Y + G
Sbjct: 451 NVITIINLLEACSVTAELKRS-KWAHGVAIRQGFASEVTVGTAVVDMYSKCG 501
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 162/320 (50%), Gaps = 4/320 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CASS+ + R + ++ +F+ N I+ Y KC + A +F+E+ +R+
Sbjct: 256 VLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRN 315
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN+ML + N L M V +++T N+L+ + K +H
Sbjct: 316 NVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHC 375
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++++RG N ++ S+L+DAY KC ++ A +F ++ ++ VSW+ ++ + G E
Sbjct: 376 VMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDE 435
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ ++ +M R+ ++P T N L ACS + HGV I+ F + V ++ +
Sbjct: 436 AIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVD 495
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVIS 343
MY KCG + +R DQ +NI++W+++++ Y ++G EA LF EM N ++
Sbjct: 496 MYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVT 555
Query: 344 WNAMLAGYTRSLLWKEALDF 363
++LA + L +E L
Sbjct: 556 TLSVLAACSHGGLVEEGLSL 575
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 17/323 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ H F C S ++ R E+N +L+ I+ Y KC ++ A +F M
Sbjct: 364 FVHPFH-CKSIHCVMIRRGSEAN---------ELVLSALIDAYAKCYLIEIAWEVFARMR 413
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
RD SW+ M+ + G P + ++ +M+ V N IT N+L + + EL SK
Sbjct: 414 RRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKW 473
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HG+ +++GF V + +++VD Y KC + +RR FD + KN V+W+ ++ Y + G
Sbjct: 474 AHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGL 533
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVVLG 283
EA+ +F +M R ++P T + L ACS EG+ + +++ + E
Sbjct: 534 AHEALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYS 593
Query: 284 SLTEMYVKCGRLEDARGLLD-QPDE-RNIIS-WTSIVSG---YAISGRIREARELFNEMP 337
+ +M + G+L+ A ++ PD +N S W S++S Y ++ +EA E+
Sbjct: 594 CMVDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELE 653
Query: 338 ERNVISWNAMLAGYTRSLLWKEA 360
N + + Y LW +A
Sbjct: 654 PSNSAGYLVASSMYAADGLWDDA 676
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 5/241 (2%)
Query: 357 WKEALDFVFLMRKT-TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
W+E + ++K + +D IL + LS + GK +H + + + S + N
Sbjct: 28 WQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSH-RHGKSLHACLIKQGFDSFTSIGN 86
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-R 474
+++ Y +CG+ A F M + RD VSWN ++ G+ G + F+ +
Sbjct: 87 SIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVAGFE 146
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P+ T ++ AC + + G +H ++I++ + + +L+ +Y +E A +
Sbjct: 147 PNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECAREL 205
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGN 593
F E DVI + MI G+ E + L++F ++ GI+PD + +L AC +
Sbjct: 206 FDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRD 265
Query: 594 V 594
V
Sbjct: 266 V 266
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 248/470 (52%), Gaps = 13/470 (2%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+S + A K +T ARR+FD++ +K+ V+WN ++ Y G ++A+ +F M + R
Sbjct: 9 TSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P FTF L AC+ L GM+IH ++ + V SL +MY KC AR +
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
++ N +SW S++ Y SG AR +F+ MP++ I+WN M++GY + + L
Sbjct: 129 FEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCL 188
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS--NIFVS----- 414
MR+ + DQ T ++N L E G +HGFI ++ + +F S
Sbjct: 189 GLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILT 248
Query: 415 ----NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM- 469
NA++D + K G+ A + F Q++ ++ VSW +++TGYAR G E+A++ F +M
Sbjct: 249 QVSWNAMIDAHMKIGDTHEAFLVF-QLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMM 307
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ +P FTF +L AC+++++L GK IH +I + V LV +Y KC ++
Sbjct: 308 ENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQ 367
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
+ FKE D++ N+M+ G + +ALE++ M G+KPD +TF G+L+ C
Sbjct: 368 GSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCS 427
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
H G ++ F+SM YG+ + EH CM+ L R GY+ + + V+
Sbjct: 428 HSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 477
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 160/594 (26%), Positives = 268/594 (45%), Gaps = 94/594 (15%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F I K G + AR LFDEMP +D +WNAML +Y+Q G + L LF M
Sbjct: 5 LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ ++ T+ L + A EL ++H +V G ++ + +SL+D YGKC+ T
Sbjct: 65 ANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATS 124
Query: 197 ARRMFDDIQNKNAVSW-------------------------------NVIVRRYLVAGNG 225
ARR+F+++ N VSW N+++ Y G+
Sbjct: 125 ARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDV 184
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ + +F KM + ++P +TF+ + A L P G +HG IIK + DDV+
Sbjct: 185 ELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGW--DDVM---- 238
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
++ ++ G+L Q +SW +++ + G EA +F PE+NV+SW
Sbjct: 239 --------KVFESIGILTQ------VSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWT 284
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+M+ GY R+ ++AL F M + D T G +L+ C+ L+ + GK +HG I
Sbjct: 285 SMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHY 344
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ + + V N L++MY KCG+++ + F ++ +D VSWNA+L G G + +A+
Sbjct: 345 GFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI-LGKDLVSWNAMLFGLGMHGHATQALEL 403
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ EM +P K TF LL C++ +E+G+ +
Sbjct: 404 YEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQAL------------------------- 438
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG---REALEVFGLMKKEGIKPDHITF 581
E + V+ S + ++C +LG RG +A E+ + G + +
Sbjct: 439 ---FESMVSVYGLSQETEHVVCMVDLLG-----RGGYLAQARELVDEYSRTG-RAETSLP 489
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE-HYECMIKLYCRYGYMKELE 634
+L AC V++ + ++ PQ E Y + LYC G KE E
Sbjct: 490 EALLGACFAHSEVRMGANLGEYLKV---FEPQKEMSYVLLSNLYCVSGQWKEAE 540
>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 767
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 235/449 (52%), Gaps = 6/449 (1%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P P +F N I Y K G++ A LF +MPERD SWN M+ +Q+GF TL FL
Sbjct: 189 PNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFL 248
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+M + G N +TYA+VL + +L LH IV+ C +V L+D Y KC
Sbjct: 249 EMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCG 308
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ AR++FD + NAVSW ++ AG +EA+V+F +M + FT A L
Sbjct: 309 RLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLG 368
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
C G Q+H I + V +L MY KCG + A + R+IIS
Sbjct: 369 VCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIIS 428
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
WT++++ ++ +G + +ARE F++MPERNVISWN+MLA Y + W+E L M +
Sbjct: 429 WTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGV 488
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D +T ++ CA L+ + +G ++ + +SSN+ V+N+++ MY +CG + A+
Sbjct: 489 KTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQK 548
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA-ACANI 490
F + ++ VSWNA++ GYA+ GQ + + F +M P + ++ ++L+
Sbjct: 549 MFSSIVM-KNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSDLLGRA 607
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALV 519
LEQ K + + + ++ N GAL+
Sbjct: 608 GQLEQAKNL---INQMPFKPNAAIWGALL 633
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 181/734 (24%), Positives = 311/734 (42%), Gaps = 162/734 (22%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA--------------- 96
CAS ++I ARKL + L+ +FL N + Y CG + DA
Sbjct: 4 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 63
Query: 97 ----------------RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
LF++MPERD SWN+M+ Y NG T+++F+ M
Sbjct: 64 NTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRDCCC 123
Query: 141 A-NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ +++ V+++S L ++ QLHG K F + +E+S++D Y KC M A++
Sbjct: 124 VPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQK 183
Query: 200 -------------------------------MFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+F + ++ VSWN ++ G G E
Sbjct: 184 VFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 243
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ F +M + RP + T+A+ L AC+ + G +H I++++ D L +M
Sbjct: 244 LNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDM 303
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KCGRLE AR++F+ + E N +SW +++
Sbjct: 304 YAKCGRLES-------------------------------ARQVFDGLTEHNAVSWTSLI 332
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
G ++ +EAL MR+ DQ TL +L VC +I +G+++H
Sbjct: 333 GGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLD 392
Query: 409 SNIFVSNALLDMYRKCGNL-------------------------------RSARIWFYQM 437
S++ V+NAL+ MY KCG++ AR +F +M
Sbjct: 393 SSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKM 452
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
+R + +SWN++L Y +RG EE + + +M E + TF T ++ACA+++ L G
Sbjct: 453 PER-NVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILG 511
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
QI + + NV ++V +Y++C +E A ++F +++ N+M+ G+ N
Sbjct: 512 NQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQN 571
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
+GR+ +E+F M G PD I++ +L
Sbjct: 572 GQGRKVIEIFEKMLNIGNVPDQISYVSVL------------------------------- 600
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
L R G +++ ++ +N+MPF P + + CR +G L E A + L EL+
Sbjct: 601 ----SDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELD 656
Query: 677 PWAPFQFKITTNRF 690
P + + N +
Sbjct: 657 AEGPGSYCLLANIY 670
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 250/549 (45%), Gaps = 66/549 (12%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
++ A + ++++LH ++ G ++ L++ L++ Y C +++DA R+F I N
Sbjct: 1 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLRED---------------------------IR- 241
SWN ++ + +G +EA +F KM D +R
Sbjct: 61 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRD 120
Query: 242 ----PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
P F+F+ + A L +Q+HG K DF D V S+ +MY+KCG ++
Sbjct: 121 CCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 180
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
A+ + + ++ W S++ GY+ G +++A ELF +MPER+ +SWN M++ ++
Sbjct: 181 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFG 240
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
E L+ M + +T +L+ C + +++ G +H I R + +++ L
Sbjct: 241 AETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGL 300
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPS 476
+DMY KCG L SAR F +++ + VSW +++ G A+ G EEA+ F++M +
Sbjct: 301 IDMYAKCGRLESARQVFDGLTE-HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASD 359
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+FT T+L C + + G+Q+H I + +V ALV +Y KC + A F+
Sbjct: 360 QFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFE 419
Query: 537 ESSSLDVIICNSMILGF-----------------------------CHNERG--REALEV 565
D+I +MI F + +RG E L+V
Sbjct: 420 LMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKV 479
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
+ M +EG+K D ITF + AC + L Q K G + ++ +Y
Sbjct: 480 YIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAE-KLGFSSNVSVANSVVTMYS 538
Query: 626 RYGYMKELE 634
R G ++E +
Sbjct: 539 RCGQIEEAQ 547
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 158/323 (48%), Gaps = 31/323 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
YA + C S + L + +V P V+ I+ Y KCG L+ AR +FD +
Sbjct: 262 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT 321
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
E + SW +++G Q GF L LF M V+++Q T A VL + ++ + +Q
Sbjct: 322 EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ 381
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKC------------MVMTD---------------- 196
LH + RG +V + ++LV Y KC M + D
Sbjct: 382 LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGD 441
Query: 197 ---ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
AR FD + +N +SWN ++ Y+ G +E + ++ +MLRE ++ TF+ ++ A
Sbjct: 442 VEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISA 501
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L+ G QI K+ F + V S+ MY +CG++E+A+ + +N++SW
Sbjct: 502 CADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSW 561
Query: 314 TSIVSGYAISGRIREARELFNEM 336
++++GYA +G+ R+ E+F +M
Sbjct: 562 NAMMAGYAQNGQGRKVIEIFEKM 584
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/587 (28%), Positives = 276/587 (47%), Gaps = 34/587 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G +D+A F + N M+ + P L + M +G ++ T+ VL
Sbjct: 68 GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ A LG + H ++K G +V +SLV Y K ++ DA R+FD + ++ V
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SWN +V Y+ G G A+ F +M + + AL AC S+ G +IHG
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I+ E D V SL +MY KC G + A
Sbjct: 248 AIRHGLEQDVKVGTSLVDMYCKC-------------------------------GNVFFA 276
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+F +MP R V++WN M+ GY + +A D MR ++ VT +L CA
Sbjct: 277 ENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQT 336
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
G+ VH ++ R + ++ + ALL+MY K G + S+ F Q++ + VSWN +
Sbjct: 337 ESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDK-TLVSWNNM 395
Query: 450 LTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+ Y +EA+ F E+ P FT T++ A + S+ Q KQ+H ++++ Y
Sbjct: 396 IAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGY 455
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ + A++ +Y +C + + +F + DVI N++I+G+ + +G+ ALE+F
Sbjct: 456 GDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDE 515
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
MK G++P+ TF +L AC G + F+SM+ +YG+IPQ+EHY CM L R G
Sbjct: 516 MKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAG 575
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
++E+ F+ MP PT + + R + E+AA R+ +L
Sbjct: 576 ELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQL 622
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 208/449 (46%), Gaps = 35/449 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + A+ E R + ++ V+ N + Y K G + DA +FD MP RD
Sbjct: 126 VLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARD 185
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQLH 166
SWN M+ Y NG L F +MN + V + + L + E L + +++H
Sbjct: 186 IVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIH 245
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
G ++ G +V + +SLVD Y KC + A +F + + V+WN ++ Y +
Sbjct: 246 GYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPV 305
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+A F +M + + T N L AC+ S G +H +++ F V+ +L
Sbjct: 306 DAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALL 365
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
EMY K G++E + + Q ++ ++SW N
Sbjct: 366 EMYGKVGKVESSEKIFGQITDKTLVSW-------------------------------NN 394
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
M+A Y +++EA+ + D T+ ++ L I+ K++H +I +
Sbjct: 395 MIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLG 454
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
Y + + NA++ MY +CGN+ ++R F +M +D +SWN ++ GYA GQ + A+ F
Sbjct: 455 YGDSTLIMNAVMHMYARCGNIVASREIFDKMPG-KDVISWNTIIIGYAIHGQGKIALEMF 513
Query: 467 SEMQWE-TRPSKFTFETLLAACANISSLE 494
EM+ P++ TF ++L AC ++S LE
Sbjct: 514 DEMKCSGMEPNESTFVSVLTAC-SVSGLE 541
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 153/284 (53%), Gaps = 8/284 (2%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCGN+ A +F +MP R +WN M+G Y N P + F+ M G
Sbjct: 264 VDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEV 323
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T N+L + A+ + +H +V+R F +V+LE++L++ YGK + + ++F
Sbjct: 324 VTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQ 383
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I +K VSWN ++ Y+ +EA+ +F ++L + + P FT + A L S +
Sbjct: 384 ITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQC 443
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+H I+K+ + +++ ++ MY +CG + +R + D+ +++ISW +I+ GYAI
Sbjct: 444 KQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIH 503
Query: 324 GRIREARELFNEMP----ERNVISWNAMLAGYTRSLL----WKE 359
G+ + A E+F+EM E N ++ ++L + S L WKE
Sbjct: 504 GQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKE 547
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 3/276 (1%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ + +GR+ EA + F + N M+ G+ + L +AL M
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D+ T ++L CA + G+ H + + ++++ +N+L+ +Y K G + A F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETL--LAACANISS 492
M R D VSWN ++ GY G A+ F EM + + + LAAC S+
Sbjct: 179 DGMPAR-DIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
L G++IH + IR+ E +V +LV++Y KC + +A VF + V+ N MI G
Sbjct: 238 LALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGG 297
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ NER +A + F M+ +G + + +T +L AC
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTAC 333
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 135/281 (48%), Gaps = 14/281 (4%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L CA +++ + R + + +V + P V L +E YGK G ++ + +F ++ ++
Sbjct: 328 NLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDK 387
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
SWN M+ AY + LFL++ + + + T V+ + + KQ+H
Sbjct: 388 TLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMH 447
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
IVK G+ + ++ ++++ Y +C + +R +FD + K+ +SWN I+ Y + G GK
Sbjct: 448 SYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGK 507
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG-------MQIHGVIIKIDFEGDD 279
A+ MF +M + P TF + L ACS EG Q +G+I +I+
Sbjct: 508 IALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEH---- 563
Query: 280 VVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSG 319
G +T++ + G L + R + + P W S+++
Sbjct: 564 --YGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTA 602
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/588 (27%), Positives = 290/588 (49%), Gaps = 50/588 (8%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
P +F N I+ G+ G +++AR +F+EM +RD SWN+M+ Y+QNG LF
Sbjct: 35 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF- 93
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ V N T+ +L A+E + ++++ + +R NV+ ++++ Y +
Sbjct: 94 ---DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTER----NVVSWNAMISGYVQNG 146
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ +AR++FD++ KN SWN +V Y EA +F +M + + ++ +
Sbjct: 147 DLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERN----SVSWMVMIS 202
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNII 311
+S +E V +K+ ++ ++ + +CGRL+DA L ++ P++ N
Sbjct: 203 GYVHISDYWEAWD---VFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSA 259
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW ++++G+ + REA EL E+ + ++
Sbjct: 260 SWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTS--------------------- 298
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
L+ CA + ++++G+ +H + N +V N L+ MY KCGN+
Sbjct: 299 ----------ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 348
Query: 432 IWFYQMSQ-RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACAN 489
F + +RD VSW A+++ Y + G E A+ F +M +P++ T +LL+AC N
Sbjct: 349 HVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGN 408
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
+ +++ G+Q H + + ++ + +L+ +Y K C E VF+E D+I N++
Sbjct: 409 LGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK-CGYEDGFCVFEEMPEHDLITWNAV 467
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
++G N G+EA+++F M+ EGI PD ++F G+L AC H G V F+SM KYG
Sbjct: 468 LVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYG 527
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
I+P + HY CM+ L R GY+ E E + MP P + + CR
Sbjct: 528 IMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACR 575
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 8/235 (3%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
SG + SD + +L A CA+ + R + S + +++N I Y KC
Sbjct: 287 SGSVPSDSSFTSALSA-----CANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKC 341
Query: 91 GNLDDARGLFD--EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
GN++D +F MP+RD SW A++ AY Q G L+LFLDM G+ NQ+T +
Sbjct: 342 GNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 401
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
+L + + + +Q H LI K GF + + +SL+ Y KC D +F+++ +
Sbjct: 402 LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHD 460
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
++WN ++ G GKEA+ +F +M E I P +F L ACS EG
Sbjct: 461 LITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEG 515
>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 699
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/620 (28%), Positives = 297/620 (47%), Gaps = 55/620 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y KC L A LFD+MP+RD SWNA++ Y T +L M SG +
Sbjct: 38 NNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHA 97
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T+ + L+ A L + +QLH +++K NV S+L+D Y KC + DA +
Sbjct: 98 FDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVV 157
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR----EDIRPLNFTFANALFACSF 256
F + N VSWN ++ Y G+ + M F ++R E + + T + L
Sbjct: 158 FRYMPECNYVSWNTLIAGYSRVGD----LDMAFWLMRCQELEGVGIDDGTVSPLLTLLDG 213
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ MQ+H I+K E ++V ++ Y +C L+DA ER + ++
Sbjct: 214 VRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDA--------ERVFVGAVTV 265
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
R++++WN+MLA Y A D M+ + D
Sbjct: 266 TC--------------------RDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDD 305
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN--LRSARIWF 434
+ +++ C+ G+ +HG + + ++ VSNAL+ MY N + A F
Sbjct: 306 YSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIF 365
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSL 493
+ M +D +WN+VL GY + G+SE+A+ F +++ +TF ++ C+++++L
Sbjct: 366 FSMDV-KDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATL 424
Query: 494 EQGKQIHCFVIRNCYEIN-VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+ G+Q+H ++ ++ N V + A KC F+ +S+ + II NS+I G
Sbjct: 425 QLGQQVHVLSLKVGFDTNKYVGKDA-----KKC---------FETTSNDNAIIWNSIIFG 470
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + +G ALE+F LM+++ +KPDHITF +L AC H G V+ + SM +GI
Sbjct: 471 YAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPL 530
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
++EHY C + LY R GY++E + V MPF P +LR + CR G L A+ L
Sbjct: 531 RMEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKML 590
Query: 673 NELNPWAPFQFKITTNRFDR 692
L P + + ++ + R
Sbjct: 591 LVLEPEDHSTYVLLSDLYGR 610
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 214/478 (44%), Gaps = 60/478 (12%)
Query: 30 ISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
+SGH + +L A ++ + ++L S ++ VF + ++ Y K
Sbjct: 93 VSGHAFDNHTFGSTLKG-----VARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAK 147
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
CG +DDA +F MPE + SWN ++ Y++ G L GV + T + +
Sbjct: 148 CGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPL 207
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF---DDIQN 206
L + QLH IVK G I+ ++++ AY +C + DA R+F +
Sbjct: 208 LTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTC 267
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V+WN ++ YL+ A +F +M P ++++ + CS G +
Sbjct: 268 RDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESL 327
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYV----KCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
HG++IK E V +L MY+ +C +EDA + D ++ +W S+++GY
Sbjct: 328 HGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTWNSVLAGYVQ 385
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
GR +A LF ++ RSL FV +ID T +
Sbjct: 386 VGRSEDALRLFVQV----------------RSL-------FV--------EIDDYTFSAV 414
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ C+ L+ +++G++VH + + +N +V +KC ++ + +
Sbjct: 415 IRCCSDLATLQLGQQVHVLSLKVGFDTNKYVGKDA----KKC----------FETTSNDN 460
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ WN+++ GYA+ GQ A+ F M + + +P TF +L AC++ +E+G++I
Sbjct: 461 AIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKI 518
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 196/443 (44%), Gaps = 44/443 (9%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L +K G ++ ++L+ AY KC + A ++FD + ++ VSWN ++ Y+ +
Sbjct: 22 HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADL 81
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ M N TF + L + G Q+H V+IK+ + +L
Sbjct: 82 DSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSAL 141
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KCGR++DA + E N +SW ++++GY+ G
Sbjct: 142 LDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGD-------------------- 181
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTK----DIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
LD F + + + ID T+ +L + G+ + ++H
Sbjct: 182 ---------------LDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCK 226
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSA-RIWFYQMSQR-RDKVSWNAVLTGYARRGQS 459
I ++ + V NA++ Y +C +L+ A R++ ++ RD V+WN++L Y +
Sbjct: 227 IVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKE 286
Query: 460 EEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
A F EMQ + P +++ +++ C+ +G+ +H VI+ E++V AL
Sbjct: 287 NLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNAL 346
Query: 519 VEVYT--KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+ +Y C+E A+R+F D NS++ G+ R +AL +F ++ ++
Sbjct: 347 IAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEI 406
Query: 577 DHITFHGILLACIHEGNVKLALQ 599
D TF ++ C ++L Q
Sbjct: 407 DDYTFSAVIRCCSDLATLQLGQQ 429
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 157/352 (44%), Gaps = 53/352 (15%)
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
++L S ++ PY H + IK D +L Y KC +L A L D+ +R
Sbjct: 5 HSLIRTSHITLPYL-QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQR 63
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ +SW +++SGY + + +L N MR
Sbjct: 64 DTVSWNAVISGYVNTADLDSTWQLLNA-------------------------------MR 92
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ D T G L A +++G+++H + + + N+F +ALLDMY KCG +
Sbjct: 93 VSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVD 152
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF--------TF 480
A + F M + + VSWN ++ GY+R G + A W R + T
Sbjct: 153 DALVVFRYMPE-CNYVSWNTLIAGYSRVGDLDMAF-------WLMRCQELEGVGIDDGTV 204
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYE-INVVCRGALVEVYTKCCCLEYAIRVFKESS 539
LL + Q+HC ++++ E N+VC A++ Y++CC L+ A RVF +
Sbjct: 205 SPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCN-AIITAYSECCSLQDAERVFVGAV 263
Query: 540 SL---DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
++ D++ NSM+ + +++ A +VF M+ G +PD ++ G++ C
Sbjct: 264 TVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGC 315
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 172/649 (26%), Positives = 307/649 (47%), Gaps = 44/649 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD------ARG 98
Y+ + CA +K + + + +L+ + N + Y C N D R
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+FD M ++ +WN ++ Y + G F M V + +++ NV + +
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 159 LGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ + +GL++K G + ++ + SS + Y + + +RR+FD +N WN ++
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 217 RRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
Y+ E++ +F + + ++I T+ A A S L G Q HG + K
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E V++ SL MY +CG + + G+ F
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGV-------------------------------FLS 378
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M ER+V+SWN M++ + ++ L E L V+ M+K ID +T+ +L+ + L ++G
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR-SARIWFYQMSQRRDKVSWNAVLTGYA 454
K+ H F+ R +++ L+DMY K G +R S +++ RD+ +WN++++GY
Sbjct: 439 KQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ G +E+ F +M + RP+ T ++L AC+ I S++ GKQ+H F IR + NV
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF 557
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
ALV++Y+K ++YA +F ++ + + +MILG+ + G A+ +F M++ G
Sbjct: 558 VASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG 617
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
IKPD ITF +L AC + G + L+ F+ MR Y I P EHY C+ + R G + E
Sbjct: 618 IKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEA 677
Query: 634 EDFVNRMPFNPTVPML-RKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
+FV + + L + C+ +G L E + RL + + F
Sbjct: 678 YEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNF 726
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 151/587 (25%), Positives = 278/587 (47%), Gaps = 51/587 (8%)
Query: 70 TFYP---TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
TF P TP + + + GN AR LFD +P+ WN ++ + N P
Sbjct: 29 TFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHE 88
Query: 127 TLELFLDMNHSG--VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSL 184
L + M + + + TY++ L++ AE L K +H +++ + ++ +SL
Sbjct: 89 ALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSL 148
Query: 185 VDAYGKCMVMTD------ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
++ Y C+ D R++FD+++ KN V+WN ++ Y+ G EA F M+R
Sbjct: 149 MNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM 208
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI--DFEGDDVVLGSLTEMYVKCGRLE 296
+++P +F N A S S + +G+++K+ ++ D V+ S MY + G +E
Sbjct: 209 EVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIE 268
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE-MPERNVISWNAMLAGYTRSL 355
+R + D ERNI W +++ Y + + E+ ELF E + + ++S
Sbjct: 269 SSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS------------ 316
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
D+VT L + + L ++++G++ HGF+ +N I + N
Sbjct: 317 -------------------DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-R 474
+L+ MY +CG++ + F M + RD VSWN +++ + + G +E + EMQ + +
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
T LL+A +N+ + E GKQ H F+IR + + L+++Y+K + + ++
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKL 475
Query: 535 FKES--SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
F+ S + D NSMI G+ N + VF M ++ I+P+ +T IL AC G
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
+V L Q +Y + + ++ +Y + G +K ED ++
Sbjct: 536 SVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 160/345 (46%), Gaps = 30/345 (8%)
Query: 84 IECYGKCGNLDDARGLFDE--MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I+ Y K G + ++ LF+ ERD +WN+M+ YTQNG +T +F M +
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP 519
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +T A++L + ++ + + KQLHG +++ NV + S+LVD Y K + A MF
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ +N+V++ ++ Y G G+ A+ +F M I+P TF L ACS+
Sbjct: 580 SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 262 EGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS--WTSIVS 318
EG++I + ++ + + +T+M + GR+ +A + E I+ W S++
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
Query: 319 GYAISGRIREARELFNEMPE----RNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKD 373
+ G + A + + + +N + +L+ Y W K
Sbjct: 700 SCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKW--------------KS 745
Query: 374 IDQVTLGLI---LNVCAGLSEIKMGKEVHGFIHRND---YSSNIF 412
+D+V G+ L G S I++ V+ F+ R+ +SS I+
Sbjct: 746 VDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 276/569 (48%), Gaps = 47/569 (8%)
Query: 124 PGRTLEL--FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
P RTL++ + M G + Y +L E LG ++ +HG + K G ++ +
Sbjct: 57 PLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVA 116
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+SLV+AY +C DARR+FD + +N V+W +V Y + + +F +ML
Sbjct: 117 TSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRY 176
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P ++T L AC G Q+HG IK E + SL +Y K G L+
Sbjct: 177 PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLD----- 231
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE-A 360
A F +PE+NVI+W M++ E
Sbjct: 232 --------------------------SALRAFWRIPEKNVITWTTMISACAEDEECVELG 265
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
L M ++ TL ++++C ++ +GK+V F + +N+ V N+ + +
Sbjct: 266 LSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYL 325
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR-----------RGQSEEAMTSFSEM 469
Y + G A F QM + ++WNA+++GYA+ R + +A+T F ++
Sbjct: 326 YLRKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDL 384
Query: 470 QWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ +P FTF ++L+ C+ + +LEQG+QIH I++ + +VV ALV +Y KC C+
Sbjct: 385 KRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCI 444
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ A + F E + + SMI G+ + + +EA+++F M+ G++P+ ITF +L AC
Sbjct: 445 QDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC 504
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ G V+ A +FD M+ +Y I P ++HY CMI ++ R G +++ F+ R F P +
Sbjct: 505 SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAI 564
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ CR +G L +AA +L EL P
Sbjct: 565 WSSLVAGCRSHGNMELAFYAADKLLELKP 593
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/577 (24%), Positives = 266/577 (46%), Gaps = 64/577 (11%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L + V ++Y L C ++ AR + ++ +F+ + Y +CG
Sbjct: 70 LTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAA 129
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
DAR LFD MPER+ +W A++ YT N P LE+F++M G + T L +
Sbjct: 130 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 189
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
++ + KQ+HG +K G + +SL Y K + A R F I KN ++W
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 249
Query: 214 VIVRRYLVAGNGKEAV----VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
++ +E V +F ML + + P FT + + C G Q+
Sbjct: 250 TMIS---ACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
KI E + V S +Y++ G ++A L +Q ++ +II+W +++SGYA +I ++
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA---QIMDS 363
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+ +++ R+ G+ +AL ++++ D T IL+VC+ +
Sbjct: 364 AK--DDLQARS--------RGF-------QALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++ G+++H ++ + S++ V++AL++MY KCG ++ A F +M R V+W ++
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSM 465
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-C 507
++GY++ GQ +EA+ F EM+ RP++ TF +LL+AC+ +E+ + + + C
Sbjct: 466 ISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYC 525
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E V G +++++ + +E + F
Sbjct: 526 IEPVVDHYGCMIDMFVRLGRVE----------------------------------DAFS 551
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+K+ G +P+ + ++ C GN++LA D +
Sbjct: 552 FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKL 588
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 282/593 (47%), Gaps = 47/593 (7%)
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLEL--FLDMNHSGVSANQITYANVLRSSAEEL 157
FD+ S A+ ++ P R L+ + M G + Y +L E
Sbjct: 31 FDKGTSYQRSSAQALENGRLEHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAG 90
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
LG ++ LHG +VK G ++ + +SLV+ Y +C DARR+FD + +KN V+W ++
Sbjct: 91 GLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALIT 150
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ + A+ +F +ML P ++T L ACS G Q+HG IK +
Sbjct: 151 GHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADT 210
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ SL +Y K G LE GL F P
Sbjct: 211 ITSMGNSLCRLYCKSGDLES--GL-----------------------------RAFKGTP 239
Query: 338 ERNVISWNAMLAGYTRSLLWKE-ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++NVI+W M++ + + L M + ++ TL ++++C ++ +GK
Sbjct: 240 DKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGK 299
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR- 455
+V F ++ +N+ V N+ + +Y + G A F +M ++WNA+++GYA+
Sbjct: 300 QVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSS-SIITWNAMISGYAQI 358
Query: 456 ----------RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
R + +A+ F ++ + E +P FTF ++L+ C+ + +LEQG+QIH I
Sbjct: 359 MDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTI 418
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ +VV ALV +Y KC +E A + F E + + SMI G+ + R ++A++
Sbjct: 419 KTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQ 478
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+F M G +P+ ITF +L AC + G V+ A ++FD MR +Y I P ++HY CM+ ++
Sbjct: 479 LFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMF 538
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + + F+ R F P + + CR +G L +AA RL EL P
Sbjct: 539 VRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKP 591
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 153/644 (23%), Positives = 298/644 (46%), Gaps = 75/644 (11%)
Query: 15 KSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT 74
+S P+P ++ G L+ + V ++Y L C + + AR L ++V
Sbjct: 53 ESPPRPLDAQEAM----GMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTA 108
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
+F+ + Y +C + DAR LFD MP+++ +W A++ +T N P LE+F++M
Sbjct: 109 ADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEM 168
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G + T +L + + + + +Q+HG +K G + +SL Y K +
Sbjct: 169 LELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDL 228
Query: 195 TDARRMFDDIQNKNAVSWNVIV------RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
R F +KN ++W ++ YL G + +F ML + P FT
Sbjct: 229 ESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLG-----LSLFLDMLEGGVMPNEFTLT 283
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+ + C G Q+ K+ E + V S +Y++ G ++A L ++ D
Sbjct: 284 SVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSS 343
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+II+W +++SGYA ++ + +A G+ L+++ L+R
Sbjct: 344 SIITWNAMISGYA-------------QIMDSAKDDLHARSRGFQALKLFRD------LVR 384
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
K D T IL+VC+ + ++ G+++H + S++ V++AL++MY KCG++
Sbjct: 385 SELKP-DLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIE 443
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAAC 487
A F +M R V+W ++++GY++ G+S++A+ F +M RP++ TF +LL+AC
Sbjct: 444 CATKAFVEMPTRT-PVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSAC 502
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+ +E+ ++ + ++RN Y I LV+ Y C ++ +R+ + LD
Sbjct: 503 SYAGLVEEAER-YFDMMRNEYHIE-----PLVDHYG--CMVDMFVRLGR----LD----- 545
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+ F +K+ G +P+ + ++ C GN++LA D +
Sbjct: 546 ----------------DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRL--- 586
Query: 608 YGIIPQ-LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
+ P+ +E Y ++ +Y G +++ V ++ + V +LR
Sbjct: 587 LELKPKVIETYVLLLNMYISTGRWRDVAR-VRKLAKHEDVGVLR 629
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/629 (28%), Positives = 299/629 (47%), Gaps = 64/629 (10%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
PTP V L AI + CG L AR DG +AM G L+ F
Sbjct: 90 PTPKVLTLKFAINSH--CGRLAVAR---------DGLRCDAMRGP--------SPLKFF- 129
Query: 133 DMNHSGVSANQITYA-----NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
H G+S + + ++L ++ + L + Q+H I+ + L ++L++
Sbjct: 130 ---HKGLSPTPPSPSPTHLNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINL 186
Query: 188 YGKCMVMTDARRMFDDIQN--KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
Y KC + A +F + K V+W ++ +A+ +F +M P F
Sbjct: 187 YAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQF 246
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
TF++ L A + G Q+H +I K F+ + V +L +MY KC +
Sbjct: 247 TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS-------- 298
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FV 364
A +F++MPERN++SWN+M+ G+ + L+ A+ F
Sbjct: 299 -----------------------AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
++R+ T ++V++ +L+ CA + + G++VHG + + +V N+L+DMY KC
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETL 483
+ +Q RD V+WN ++ G+ + + EEA F M+ E P + +F T+
Sbjct: 396 -RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L + A++++L QG IH +I+ Y N+ G+L+ +Y KC L A +VF+ +V
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
I +MI + + + +E+F M EGI+P H+TF +L AC H G V+ L F+S
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 574
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT 663
M+ + + P EHY CM+ L R G++ E + F+ MP PT + + CRK G
Sbjct: 575 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 634
Query: 664 LGEWAARRLNELNPWAPFQFKITTNRFDR 692
+G AA RL E+ P+ P + + N R
Sbjct: 635 MGREAAERLFEMEPYNPGNYVLLANMCTR 663
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 221/465 (47%), Gaps = 43/465 (9%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE- 105
HL ++++ A ++ + ++ T FL N I Y KCG L+ A LF
Sbjct: 147 HLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH 206
Query: 106 -RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ +W +++ + + L LF M SG NQ T++++L +SA + + +Q
Sbjct: 207 FKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQ 266
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH LI K GF N+ + ++LVD Y KC M A R+FD + +N VSWN ++ +
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326
Query: 225 GKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
AV +F +LRE + P + ++ L AC+ + G Q+HGV++K V+
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY KC ++ L +R++++W
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTW------------------------------ 416
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
N ++ G+ ++ ++EA ++ ++MR+ D+ + +L+ A L+ + G +H I
Sbjct: 417 -NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 475
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ Y N+ + +L+ MY KCG+L A F + + + +SW A+++ Y G + + +
Sbjct: 476 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGI-EDHNVISWTAMISAYQLHGCANQVI 534
Query: 464 TSFSEMQWE-TRPSKFTFETLLAACANISSLEQG-------KQIH 500
F M E PS TF +L+AC++ +E+G K+IH
Sbjct: 535 ELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH 579
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 206/427 (48%), Gaps = 13/427 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
++ + A++ ++ ++L S + +F+ ++ Y KC ++ A +FD+MP
Sbjct: 248 FSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEELELGVSK 163
ER+ SWN+M+ + N R + +F D + V N+++ ++VL + A L +
Sbjct: 308 ERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGR 367
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+HG++VK G + +SL+D Y KC + ++F + +++ V+WNV+V ++
Sbjct: 368 QVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQND 427
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+EA F+ M RE I P +F+ L + + L++ ++G IH IIK+ + + +LG
Sbjct: 428 KFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILG 487
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV-- 341
SL MY KCG L DA + + ++ N+ISWT+++S Y + G + ELF M +
Sbjct: 488 SLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEP 547
Query: 342 --ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG--LSEIKMGKE 397
+++ +L+ + + +E L M+K I + G C L E
Sbjct: 548 SHVTFVCVLSACSHTGRVEEGLAHFNSMKK----IHDMNPGPEHYACMVDLLGRAGWLDE 603
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY--AR 455
FI V ALL RK GNL+ R ++ + N VL R
Sbjct: 604 AKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTR 663
Query: 456 RGQSEEA 462
G+ EEA
Sbjct: 664 SGRLEEA 670
>gi|218197545|gb|EEC79972.1| hypothetical protein OsI_21597 [Oryza sativa Indica Group]
Length = 731
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 182/658 (27%), Positives = 306/658 (46%), Gaps = 69/658 (10%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
NR + + + G L+ AR +FD MP RD SWN ++ + G GR + FL+M G
Sbjct: 39 NRLMAEHLRAGRLEAAREVFDGMPRRDVVSWNTIMAVQARAGSHGRAVGAFLEMRRQGFR 98
Query: 141 ANQITYANVLRSSA--EELELGVSKQ-----------------LHGLIV-------KRGF 174
+ +++ L + A E LE+G + + GL++ ++ F
Sbjct: 99 PDHTSFSTALSACARLEALEMGSCLEQVLDGVESPNVALWNALISGLVMNHRVGDARKAF 158
Query: 175 ----CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
NV+ ++++ + + A ++F + KN+VSW V++ ++ EAV
Sbjct: 159 DRMPVRNVVSWTAMIKGHFTVHEVDMAFQLFKLMPVKNSVSWCVMIGGFVTHEKFSEAVE 218
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F ++ N + A + + S G IHG+ +K F D V+ SL MY
Sbjct: 219 LFNSLMMNGEEVTNVILVKIVNAFAGMKSIRGGRCIHGLAVKSGFAYDLVLEASLVLMYC 278
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
K + +AR D+ + ++ SW +++ GY S +I EAR+LF+ M R+ ISWN+M+ G
Sbjct: 279 KSLDITEARLEFDKMEGNHVGSWNAMLCGYIYSDKIDEARKLFDSMNNRDKISWNSMING 338
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y +A + M T K ++ T + + G+ + K F N +
Sbjct: 339 YINDGRIADATELYSKM--TEKSLEAATALMSWFIDNGM----LDKARDMFY--NMPQID 390
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------------------ 440
+ LL Y K G++ A F+ M +R
Sbjct: 391 VMSCTTLLFGYVKGGHMDDALDLFHMMQKRTVVTYNVMISGLFHQGKITEAYKLFNESPT 450
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
RD V+W+ ++ G A G EA+ + +M RPS+ +L++ +N S + G+Q
Sbjct: 451 RDSVTWSCLVAGLATNGLIHEALQFYKKMLLSNIRPSESVVSSLISCLSNYSMMVHGQQF 510
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H I+ + +++ + +L+ +Y KC + A +F + D + N++I G+ N G
Sbjct: 511 HATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIFDLMAKRDKVTWNTIIHGYALNNLG 570
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
+ A+E+F M K + PD ITF G+L AC H ++ A FF++M C YGI+P + HY C
Sbjct: 571 QNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLEEAKYFFNAMTCTYGILPNIMHYAC 630
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M+ L+CR +KE E V MPF P + + CR G L E AA +L ++P
Sbjct: 631 MVDLFCRKCMIKEAEGLVKSMPFEPDSAIWTSLLSGCRLTGNDKLAEHAASQLIAIDP 688
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S S+ + L ++ +V ++ + + + + N I Y KCG + A+ +F
Sbjct: 487 SESVVSSLISCLSNYSMMVHGQQFHATTIKIGLDSHLLIQNSLISLYCKCGEMIIAQSIF 546
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D M +RD +WN ++ Y N +E+F M + V + IT+ VL + L
Sbjct: 547 DLMAKRDKVTWNTIIHGYALNNLGQNAVEMFESMTKAQVDPDDITFLGVLSACNHMSLLE 606
Query: 161 VSKQ-LHGLIVKRGFCGNVILESSLVDAY-GKCMV 193
+K + + G N++ + +VD + KCM+
Sbjct: 607 EAKYFFNAMTCTYGILPNIMHYACMVDLFCRKCMI 641
>gi|242093006|ref|XP_002436993.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
gi|241915216|gb|EER88360.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
Length = 698
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/609 (27%), Positives = 290/609 (47%), Gaps = 42/609 (6%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
FL N + Y AR LFDEM R+ SW+ ++ ++G LF M H
Sbjct: 62 FLCNNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGSARHGVLAEAFALFSHMLHG 121
Query: 138 GVSA-----NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
+ ++ + + Q+H + K G + + ++LVD Y KC
Sbjct: 122 AGQGSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFGVDEDESVAAALVDMYAKCG 181
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG---KEAVVMFFKMLREDIRPLNFTFAN 249
+ + R F ++ +SW ++ + G+ A+++F KML + P N TF+
Sbjct: 182 WVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYHDAAMLLFKKMLALKVWPTNVTFSC 241
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
L + GMQIHG ++KI E D + +L MY +CG +++ L + +
Sbjct: 242 ILKVFNTPDLLSVGMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVDEIARLACRI-RHD 300
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+ S TS++ YA +G EA +F EM N+
Sbjct: 301 VFSRTSLLGAYARNGYNAEAIGVFKEMILTNMA--------------------------- 333
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
IDQ + +L VC+ + +++M +EVH + + + + + NA++ +Y +CG+ S
Sbjct: 334 ----IDQSAMTCLLQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTS 389
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACA 488
A F M + +D +SW A+LT YA+ G EE + F EM S F ++L AC+
Sbjct: 390 AETVFNLM-EEQDIISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACS 448
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
S+L G QIH ++ + + ALV +Y C ++ A+++F S+ D++ N+
Sbjct: 449 RTSNLAIGLQIHSRTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNA 508
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
++ F + A+++F LM++E + PD TF G+L +C G VK ++F+ M+ KY
Sbjct: 509 LLTSFSQHGNEVAAIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKY 568
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
+ P++ HY CM+ L+ R G + DF++ MP+ P + + C+ +G LG A
Sbjct: 569 NLEPKMVHYTCMVDLFARAGRFCDAMDFIDAMPYEPDQILWEALLASCKIHGNLGLGRIA 628
Query: 669 ARRLNELNP 677
A+++ E+ P
Sbjct: 629 AKKILEITP 637
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 204/491 (41%), Gaps = 45/491 (9%)
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
G HG+ +K G + L ++L+ AY V ARR+FD++ +N VSW+V++
Sbjct: 43 GHPHSAHGVAIKLGCIASTFLCNNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGS 102
Query: 220 LVAGNGKEAVVMFFKMLRED-----IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
G EA +F ML RP +F + CS G+Q+H + K
Sbjct: 103 ARHGVLAEAFALFSHMLHGAGQGSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFG 162
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS---GYAISGRIREARE 331
+ D+ V +L +MY KCG ++ + +R+++SWTS+++ SG A
Sbjct: 163 VDEDESVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTSMIACLVNQGSSGYHDAAML 222
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF +M V N VT IL V
Sbjct: 223 LFKKMLALKVWPTN-------------------------------VTFSCILKVFNTPDL 251
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS-ARIWFYQMSQRRDKVSWNAVL 450
+ +G ++HG + + + + +AL+ MY +CG + AR+ R D S ++L
Sbjct: 252 LSVGMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVDEIARL---ACRIRHDVFSRTSLL 308
Query: 451 TGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
YAR G + EA+ F EM + LL C+++ L +++HC+ ++ ++
Sbjct: 309 GAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQVCSSVGQLRMVREVHCYALKTFFK 368
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM 569
++ + A++ VY +C A VF D+I +++ + N E L F M
Sbjct: 369 LDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIISWTALLTCYAQNGLDEEVLLFFREM 428
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
+ G+ +L AC N+ + LQ S K GI ++ LY G
Sbjct: 429 LRRGLGSPVFCMTSVLRACSRTSNLAIGLQIH-SRTVKLGIDDDNSVENALVTLYANCGS 487
Query: 630 MKELEDFVNRM 640
++ N M
Sbjct: 488 VQVALKIFNSM 498
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 2/285 (0%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L Q+C+S + R++ + + LLN I YG+CG+ A +F+ M E+D
Sbjct: 342 LLQVCSSVGQLRMVREVHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQD 401
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW A+L Y QNG L F +M G+ + +VLR+ + L + Q+H
Sbjct: 402 IISWTALLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHS 461
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
VK G + +E++LV Y C + A ++F+ + N++ V+WN ++ + GN
Sbjct: 462 RTVKLGIDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVA 521
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLT 286
A+ +F M E++ P ++TF L +CS + EG + + + K + E V +
Sbjct: 522 AIQLFDLMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMV 581
Query: 287 EMYVKCGRLEDARGLLD-QPDERNIISWTSIVSGYAISGRIREAR 330
+++ + GR DA +D P E + I W ++++ I G + R
Sbjct: 582 DLFARAGRFCDAMDFIDAMPYEPDQILWEALLASCKIHGNLGLGR 626
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 277/567 (48%), Gaps = 33/567 (5%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N L + ++ G + +M+ + VS +Y + + + L + +H + +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+ +E+ L+ Y C D +++FD++ KN VSW +++ Y G ++A+ +
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F M IRP + + + L +C S G QIH +I+ + V ++ MYV+
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR 235
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG LE A+ +F+ M +N ++W ++ GY
Sbjct: 236 CGWLEGAK-------------------------------LVFDGMDAQNAVTWTGLMVGY 264
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
T++ + AL+ M ++D+ ++L VC GL + MG+++H I + S +
Sbjct: 265 TQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEV 324
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V L+D Y KCG++ SA F ++S+ D VSW+A+++G+++ G+ E+ + F+ ++
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRS 383
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E + F + ++ ACA ++L G Q H I+ + A+V +Y+KC L+Y
Sbjct: 384 EGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDY 443
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A R F+ D + ++I G+ ++ EAL F M+ G++P+ +TF +L AC H
Sbjct: 444 ARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSH 503
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G V A Q+ SM YG+ P ++HY+CMI Y R G ++E + +NRMPF P +
Sbjct: 504 SGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWK 563
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNP 677
+ C + LG+ AA L L+P
Sbjct: 564 SLLGGCWAHCDLKLGKIAAENLFRLDP 590
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 225/464 (48%), Gaps = 33/464 (7%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
+D V+ Y LF+ C +++ + R + L P + N + Y CG+ D
Sbjct: 81 ADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCID 140
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+ +FDEM ++ SW ++ AY +NG + + LF DM SG+ N Y ++L+S
Sbjct: 141 VQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLG 200
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L + KQ+H +++ N+ +E+++ + Y +C + A+ +FD + +NAV+W +
Sbjct: 201 PSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGL 260
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y A + A+ +F +M E + F F+ L C L G QIH I+K+
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGA 320
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E + V L + YVKCG +E A + E N +SW++++SG++ SGR+ + ++F
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ V+ N+ + YT + CA + + MG
Sbjct: 381 LRSEGVV-LNSFI--YTS----------------------------VFQACAAQANLNMG 409
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ HG + S ++ +A++ MY KCG L AR F + + D V+W A+++GYA
Sbjct: 410 SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE-PDAVAWTAIISGYAY 468
Query: 456 RGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
G + EA+ F MQ + RP+ TF +L AC++ + + KQ
Sbjct: 469 HGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 256/507 (50%), Gaps = 63/507 (12%)
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPY 261
+ +N N SWNV +R +L + N +EAVV++ ++L+ D +P N+T+ AC+ LS
Sbjct: 65 NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 124
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +I G ++ + F+ D V ++ + V CG L+ AR
Sbjct: 125 MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGAR---------------------- 162
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
++F++ R+++SWN+M+ GY R EAL+F M+ D+VT+
Sbjct: 163 ---------KMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIG 213
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR- 440
+++ CA L ++ +G+E H +I N + ++NAL+DMY KCGNL SAR F M+ +
Sbjct: 214 VVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 273
Query: 441 -----------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQ- 470
+D V WNA++ GY + +EA+ F+EMQ
Sbjct: 274 MVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQA 333
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
P + T + L+AC+ + +L+ G IH ++ ++ +NV AL+++Y KC +
Sbjct: 334 MNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITK 393
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
AI+VF+E + + ++I G + A+ F M + PD +TF G+L AC H
Sbjct: 394 AIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCH 453
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G V+ ++F M K+ + P+L+HY CM+ L R G ++E E+ + MP +
Sbjct: 454 GGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWG 513
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNP 677
+F CR +G +GE AA +L +++P
Sbjct: 514 ALFFACRIHGNVLMGERAASKLLQMDP 540
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 233/463 (50%), Gaps = 5/463 (1%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE--CYGKCGNLDDAR 97
+S L L K+I + ++++S +V F +R I + +LD
Sbjct: 1 MSLQLINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCT 60
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD-MNHSGVSANQITYANVLRSSAEE 156
+ + SWN + + + P + L+ + G + TY + ++ A
Sbjct: 61 NILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARL 120
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ + ++ G ++ GF ++ + ++++ C + AR+MFD ++ VSWN ++
Sbjct: 121 SLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMI 180
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y+ G EA+ + +M E I+P T + +C+ L G + H I + +
Sbjct: 181 NGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLK 240
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ +L +MY+KCG LE AR L D + ++SWT++V GYA SG + A +LF+EM
Sbjct: 241 LTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEM 300
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P+++V+ WNAM+ GY + KEAL M+ + D+VT+ L+ C+ L + +G
Sbjct: 301 PDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGI 360
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+H +I +++ S N+ + AL+DMY KCG + A I +Q R+ ++W A+++G A
Sbjct: 361 WIHHYIEKHELSLNVALGTALIDMYAKCGKITKA-IQVFQELPGRNSLTWTAIISGLALH 419
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
G + A+ FSEM P + TF LL+AC + +E+G++
Sbjct: 420 GNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 462
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 172/359 (47%), Gaps = 37/359 (10%)
Query: 17 SPKPTPSKTLTKTISGHLKSD--EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT 74
S P + L K + L+ D +P +Y+ Y LF+ CA I ++ +++
Sbjct: 84 SENPREAVVLYKRV---LQCDGTKPDNYT-YPLLFKACARLSLIRMGSEILGHVLHLGFD 139
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM 134
+F+ N I CG+LD AR +FD+ RD SWN+M+ Y + G+ L + +M
Sbjct: 140 SDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREM 199
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
G+ +++T V+ S A+ +L + ++ H I + G V L ++L+D Y KC +
Sbjct: 200 KVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNL 259
Query: 195 TDARRMFDDIQNKNAVS-------------------------------WNVIVRRYLVAG 223
AR++FD + NK VS WN ++ Y+ A
Sbjct: 260 ESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHAN 319
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
GKEA+ +F +M +I P T + L ACS L + G+ IH I K + + +
Sbjct: 320 RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 379
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY KCG++ A + + RN ++WT+I+SG A+ G A F+EM + +V+
Sbjct: 380 ALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVM 438
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 150/326 (46%), Gaps = 20/326 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y + G LD A LFDEMP++D WNAM+G Y L LF +M ++ +++T
Sbjct: 284 YAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 343
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+ L + ++ L V +H I K NV L ++L+D Y KC +T A ++F ++
Sbjct: 344 VSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPG 403
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
+N+++W I+ + GN A+ F +M+ + P TF L AC EG +
Sbjct: 404 RNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKY 463
Query: 267 HGVI-IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISG 324
+ K + + ++ + G LE+A L+ P E + + W ++ I G
Sbjct: 464 FSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 523
Query: 325 RI----REARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+ R A +L P + I +LA Y + +WKEA LMR+ + +++
Sbjct: 524 NVLMGERAASKLLQMDPHDSGIY--VLLANMYGEAEMWKEAGKARKLMRQ--RGVEKT-- 577
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRN 405
G S I++ V+ FI R+
Sbjct: 578 -------PGCSSIEVNGIVYEFIVRD 596
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/641 (27%), Positives = 297/641 (46%), Gaps = 43/641 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLN-RAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
+S I +N+ P PP +L+ + ++ K G L DA LFD MP ++ +W
Sbjct: 18 TSHVIARPPTAAANVRLGAPPPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWT 77
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS--KQLHGLIV 170
+ T+NG P +F DM SGV+AN L + A +S +Q+H L V
Sbjct: 78 TAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAV 137
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ GF + + S L++ Y +C M A +F ++ + V + +V G+ AV
Sbjct: 138 RAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVE 197
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+ +M+R+ ++P T + L C + G QIHG ++K+ +L + Y
Sbjct: 198 VLCQMMRQGLQPNEHTMTSMLAECPRMI----GEQIHGYMLKVMGSQSVYASTALIDFYS 253
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
+ G + A + + D +N++SW S++ GR+ +A +F+EM V
Sbjct: 254 RYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAV--------- 304
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
E +F F + LG +VC +G+++H + + ++
Sbjct: 305 --------EPNEFAF----------SIALGACGSVC-------LGRQIHCSAIKCNLMTD 339
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
I VSNALL MY + G + ++ + D VSW A ++ + G SE+A+ +M
Sbjct: 340 IRVSNALLSMYGRSGFVSEVEAVLGKI-ENPDLVSWTAAISANFQNGFSEKAVALLLQMH 398
Query: 471 WET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
E P+ + F + L++CA+++ L+QG+Q+HC ++ + V AL+ +Y+KC +
Sbjct: 399 SEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIG 458
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A F + DV+ NS+I G + LE F M G +PD TF +L+ C
Sbjct: 459 SARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCN 518
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G VK FF M +YG+ P HY CMI + R G E + MPF P V +
Sbjct: 519 HAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIW 578
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + C+ + +G+ A +L EL+ + + +N +
Sbjct: 579 KTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLY 619
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/662 (25%), Positives = 299/662 (45%), Gaps = 82/662 (12%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAML 115
+ + + R++ + + + N+ I Y LDDA GLFD M RD SW+ M+
Sbjct: 92 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 151
Query: 116 GAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
G + + G F ++ G + T V+R+ + L
Sbjct: 152 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL---------------- 195
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
+ +LVD Y KC + DAR +FD +Q ++ V+W V++ Y G E++V+F KM
Sbjct: 196 -----QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 250
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
E + P +FAC+ L + ++ I I + F+ D ++ ++ +MY KCG +
Sbjct: 251 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 310
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
E AR + D+ +E+N+ISW+++++ Y G+ R+A +LF M ++
Sbjct: 311 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLP------------ 358
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
D++TL +L C + ++VH + N+ V+N
Sbjct: 359 -------------------DKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVAN 399
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ----------------- 458
L+ Y L A F M RD VSW+ ++ G+A+ G
Sbjct: 400 KLVHFYSYYRALDDAYGLFDGMCV-RDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 458
Query: 459 -----------SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+ E++ F +M+ E P K T++ ACA + ++ + + I ++ R
Sbjct: 459 PDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRK 518
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
++++V+ A+++++ KC C+E A +F +VI ++MI + ++ +GR+AL++F
Sbjct: 519 KFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 578
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
+M + GI P+ IT +L AC H G V+ L+FF M Y + ++HY C++ L R
Sbjct: 579 PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGR 638
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G + E + M + CR + L E AA L EL P P + +
Sbjct: 639 AGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILL 698
Query: 687 TN 688
+N
Sbjct: 699 SN 700
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 29/287 (10%)
Query: 46 AHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
A L C + + + + R++ + + + N+ + Y LDDA GLFD M
Sbjct: 364 ASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCV 423
Query: 106 RDGGSWNAMLGAYTQNG-------------------------FPG---RTLELFLDMNHS 137
RD SW+ M+G + + G F G +L LF M
Sbjct: 424 RDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREE 483
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV +++ V+ + A+ + ++ + I ++ F +VIL ++++D + KC + A
Sbjct: 484 GVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESA 543
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R +FD ++ KN +SW+ ++ Y G G++A+ +F MLR I P T + L+ACS
Sbjct: 544 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 603
Query: 258 SSPYEGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
EG++ ++ + D + ++ + GRL++A L++
Sbjct: 604 GLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 650
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/614 (26%), Positives = 298/614 (48%), Gaps = 36/614 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT--LELFLDMNHSGVSANQITYAN 148
G+L A LFD++P D ++N ++ AY+ + L L+ M V+ N T+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
L++ + + + +H + G ++ + ++L+D Y KC + DA +F + ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 209 AVSWNVIVRRYLVAGNGKEAV--VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
V+WN ++ Y G AV ++ +M +RP T L + + +G +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H I+ + LT+ ++ T+++ YA G +
Sbjct: 251 HAYRIRACLHSNRNSKSKLTD---------------------GVLLGTALLDMYAKCGSL 289
Query: 327 REARELFNEMPERNVISWNAMLAGYTR-SLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
AR +F+ MP RN ++W+A++ G+ S + + L F ++ + + ++ L
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 349
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L ++MG+++H + ++ +++ N+LL MY K G + A F +M+ + D VS
Sbjct: 350 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVS 408
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIH-CFV 503
++A+++GY + G++EEA F +MQ P T +L+ AC+++++L+ G+ H +
Sbjct: 409 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 468
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
IR +C AL+++Y KC ++ + +VF S D++ N+MI G+ + G+EA
Sbjct: 469 IRGLASETSICN-ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 527
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F M G PD +TF +L AC H G V +F MR YG+ P++EHY CM+ L
Sbjct: 528 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDL 587
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G++ E +F+ MP V + + CR LG+ +R + EL P F
Sbjct: 588 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNF 647
Query: 684 KITTN------RFD 691
+ +N RFD
Sbjct: 648 VLLSNIYSAAGRFD 661
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 211/450 (46%), Gaps = 49/450 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE--LFLDM 134
+F+ ++ Y KC L DA +F MP RD +WNAML Y +G + L + M
Sbjct: 160 LFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQM 219
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN----------VILESSL 184
+ N T +L A++ L +H ++ N V+L ++L
Sbjct: 220 QMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTAL 279
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+D Y KC + ARR+FD + +N V+W+ ++ +++ +A ++F ML + + L+
Sbjct: 280 LDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLS 339
Query: 245 FT-FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
T A+AL AC+ L G Q+H ++ K D SL MY K G ++ A L D
Sbjct: 340 PTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFD 399
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ++ +S++++VSGY +GR EA +F +M NV
Sbjct: 400 EMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNV---------------------- 437
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+ D T+ ++ C+ L+ ++ G+ HG + +S + NAL+DMY K
Sbjct: 438 ---------EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG + +R F M RD VSWN ++ GY G +EA F EM P TF
Sbjct: 489 CGRIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547
Query: 483 LLAACANISSLEQGKQIHCF-VIRNCYEIN 511
LL+AC++ + +GK H F V+R+ Y +
Sbjct: 548 LLSACSHSGLVIEGK--HWFHVMRHGYGLT 575
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 142/264 (53%), Gaps = 1/264 (0%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T V L ++ Y KCG+L AR +FD MP R+ +W+A++G + + LF
Sbjct: 270 TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKA 329
Query: 134 MNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ + + A+ LR+ A L + +QLH L+ K G ++ +SL+ Y K
Sbjct: 330 MLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 389
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ A +FD++ K+ VS++ +V Y+ G +EA ++F KM ++ P T + +
Sbjct: 390 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS L++ G HG +I + + +L +MY KCGR++ +R + + R+I+S
Sbjct: 450 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 509
Query: 313 WTSIVSGYAISGRIREARELFNEM 336
W ++++GY I G +EA LF EM
Sbjct: 510 WNTMIAGYGIHGLGKEATALFLEM 533
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP + ++ + L C+ A+ R +++ + N I+ Y KCG +D +R
Sbjct: 438 EPDAATMVS-LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 496
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ MP RD SWN M+ Y +G LFL+MN+ G + +T+ +L + +
Sbjct: 497 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHS 555
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 250/502 (49%), Gaps = 42/502 (8%)
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
M +A ++FD I NA WN + R Y + K+ +V+F +M D+ P FTF L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C +++ EG ++H +IK F + V +L +MY G + A + + ERN+I+W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T++++GY + AR LF+ PER+++ WN M++GY EA D + + +
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYI------EAKDVI----RAREL 170
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D++ + ++ N +L+ Y G++ +
Sbjct: 171 FDKMP-----------------------------NKDVMSWNTVLNGYASNGDVMACERL 201
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANIS 491
F +M +R + SWNA++ GY R G E +++F M + P+ T +L+ACA +
Sbjct: 202 FEEMPER-NVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLG 260
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L+ GK +H + + Y+ NV R AL+++Y KC +E A+ VFK + D+I N++I
Sbjct: 261 ALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIG 320
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G + G +AL +F MK G PD ITF GIL AC H G V+ +F SM Y I+
Sbjct: 321 GLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIV 380
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P++EHY C++ L R G + DF+ +MP + + CR L E A +
Sbjct: 381 PRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEK 440
Query: 672 LNELNPWAPFQFKITTNRFDRY 693
L E P P + + +N + +
Sbjct: 441 LIEFEPKNPANYVMLSNIYGDF 462
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 145/328 (44%), Gaps = 22/328 (6%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+K ++ AR+L + P V N + Y G++ LF+EMPER+ SWNA+
Sbjct: 161 AKDVIRARELFDKM----PNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNAL 216
Query: 115 LGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
+G YT+NG L F M G V N T NVL + A L + K +H G
Sbjct: 217 IGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHG 276
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
+ GNV + ++L+D Y KC V+ A +F + NK+ +SWN I+ V G+G +A+ +F
Sbjct: 277 YKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFS 336
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEGDDVVLGSLT 286
M P TF L AC+ + +G + ++ +I+ G +
Sbjct: 337 HMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEH------YGCIV 390
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREAR---ELFNEMPERNVI 342
++ + G L A + + P E + + W +++ + + A E E +N
Sbjct: 391 DLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPA 450
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKT 370
++ + Y WK+ MR T
Sbjct: 451 NYVMLSNIYGDFGRWKDVARLKVAMRDT 478
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 163/404 (40%), Gaps = 74/404 (18%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L + AS AI A ++ ++ V I Y C +L AR LFD PERD
Sbjct: 92 LIDMYASGGAIHAAYRVFGEMIE----RNVIAWTAMINGYITCCDLVTARRLFDLAPERD 147
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN M+ Y + R ELF M + V +++ VL
Sbjct: 148 IVLWNTMISGYIEAKDVIRARELFDKMPNKDV----MSWNTVL----------------- 186
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
G+ N G M R+F+++ +N SWN ++ Y G E
Sbjct: 187 ----NGYASN-----------GDVMA---CERLFEEMPERNVFSWNALIGGYTRNGCFSE 228
Query: 228 AVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
+ F +ML + + P + T N L AC+ L + G +H ++G+ V +L
Sbjct: 229 VLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALM 288
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
+MY KCG +E A + D +++ISW +I+ G A+ G +A LF+ M
Sbjct: 289 DMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMK--------- 339
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+AG + + F+ ++ T +GL+ + G S K + + + R +
Sbjct: 340 -IAGEN-----PDGITFIGILCACTH------MGLVED---GFSYFKSMTDDYSIVPRIE 384
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ I +D+ + G L A + +M D V W A+L
Sbjct: 385 HYGCI------VDLLGRAGLLAHAVDFIRKMPIEADAVIWAALL 422
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 190/716 (26%), Positives = 327/716 (45%), Gaps = 87/716 (12%)
Query: 5 AATILKNILSKSSPKPT--PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEAR 62
AAT+ + L ++P P++ K ++ H S P F+ C K + E +
Sbjct: 2 AATLHLSTLIPATPTSVALPNQNELKILTKHRSS--PTGS------FKKC---KTMTELK 50
Query: 63 KLES----NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG--GS---WNA 113
+L S N + +P L++ E G +L+ A+ + E +G G+ +++
Sbjct: 51 QLHSQITKNGLNHHPLSLTNLISSCTE-MGTFESLEYAQKALELFIEDNGIMGTHYMFSS 109
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ ++ G + + +F + G + T+ VL + + L Q+HG IVK G
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMG 169
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F ++ +E+SL+ YG+C + RR+FD + +N VSW ++ Y G KEAV +FF
Sbjct: 170 FERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFF 229
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M+ IRP + T + AC+ L G Q+ I +++ E + +++ +L +MY+KCG
Sbjct: 230 EMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCG 289
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
++ AR + D+ ++N++ + +I+S Y G RE + E
Sbjct: 290 AIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGE------------------ 331
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
M K D++T+ ++ C+ L ++ GK HG++ RN V
Sbjct: 332 -------------MLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNV 378
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM---- 469
NA+++MY KCG A F +M + +VSWN+++ G+ R G E A FS M
Sbjct: 379 CNAIINMYMKCGKQEMACRVFDRM-LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSD 437
Query: 470 --QWET--------------------------RPSKFTFETLLAACANISSLEQGKQIHC 501
W T K T + +AC + +L+ K IH
Sbjct: 438 LVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHG 497
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
++ + ++ ALV+++ +C + A++VF + DV + I G
Sbjct: 498 YIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTG 557
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+E+F M ++GIKPD + F +L A H G V+ F SM+ YGI PQ HY CM+
Sbjct: 558 AIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMV 617
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G + E +N M P + + CR + + +AA R++EL+P
Sbjct: 618 DLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDP 673
>gi|242080281|ref|XP_002444909.1| hypothetical protein SORBIDRAFT_07g001200 [Sorghum bicolor]
gi|241941259|gb|EES14404.1| hypothetical protein SORBIDRAFT_07g001200 [Sorghum bicolor]
Length = 675
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 271/549 (49%), Gaps = 4/549 (0%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
+ ++++RS + Q H V GF + + LV Y +T AR +
Sbjct: 52 SLSSLIRSCTSQRARRPGDQAHARAVALGFGAHPSVLPRLVTFYITLGDLTAARAAVERA 111
Query: 205 QNK-NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ K A WN+++ Y + V+ + +ML + FT+ + L AC L G
Sbjct: 112 EGKARAFPWNLLIWGYADREQWDDVVLAYRRMLALGVAADRFTYPSVLRACGELRDASVG 171
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+I + + D V +L MY KC +EDAR + D R+++SW ++VSGYA +
Sbjct: 172 REIEQRVRSWGYGLDMYVWNALVGMYAKCEEMEDARRVFDGMPARDVVSWNAMVSGYASA 231
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK-TTKDIDQVTLGLI 382
G EA +L P N+++WNA+ AG ++ E + + MR +D VT+ +
Sbjct: 232 GMWGEAFDLLQWFPGANIVTWNAVAAGNLKAGNDSEVIRLLSQMRSFHGPGLDSVTVVIG 291
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L CA +K+GKE+H R + V ++L+ MY +C + SA F S +
Sbjct: 292 LRACARSGYLKIGKELHAVSIRLRFDRLEHVESSLITMYSRCQRMSSAYRLFRTCSTQ-S 350
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHC 501
V WN++L G+ Q EEA+ F EM + + P+ T T+L+ A L G+++HC
Sbjct: 351 VVIWNSLLAGFGFMDQVEEAILLFREMIYSSVFPNDVTVLTMLSLSARFGHLCHGREMHC 410
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
++I++ + + + +LV++Y+K + A RVF + D S+ILG+ G
Sbjct: 411 YIIKHGLGASNILQNSLVDMYSKSRQMAAAQRVFDQMQCQDRHAYTSLILGYGMQREGHL 470
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
+L++F M IK DH+T +L AC H G V F M + I P++EH+ CM+
Sbjct: 471 SLKLFDEMIANNIKVDHVTMVAVLSACSHSGLVTQGQLRFAEMFDVFCIAPRVEHFSCMV 530
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
LYCR G + E+ +N+MP PT ML + + CR +G +G+ AA+RL + P
Sbjct: 531 DLYCREGLLSMAEEIINKMPLQPTAAMLATLIEACRIHGKTEIGDRAAKRLLAMRTNNPG 590
Query: 682 QFKITTNRF 690
+K N +
Sbjct: 591 HYKSIANMY 599
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 127/587 (21%), Positives = 240/587 (40%), Gaps = 111/587 (18%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ Y + + M GV+A++ TY +VLR+ E + V +++ +
Sbjct: 120 WNLLIWGYADREQWDDVVLAYRRMLALGVAADRFTYPSVLRACGELRDASVGREIEQRVR 179
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA-- 228
G+ ++ + ++LV Y KC M DARR+FD + ++ VSWN +V Y AG EA
Sbjct: 180 SWGYGLDMYVWNALVGMYAKCEEMEDARRVFDGMPARDVVSWNAMVSGYASAGMWGEAFD 239
Query: 229 ----------------------------VVMFFKMLREDIRPL--NFTFANALFACSFLS 258
V+ +R P + T L AC+
Sbjct: 240 LLQWFPGANIVTWNAVAAGNLKAGNDSEVIRLLSQMRSFHGPGLDSVTVVIGLRACARSG 299
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G ++H V I++ F+ + V SL MY +C R+ A L ++++ W S+++
Sbjct: 300 YLKIGKELHAVSIRLRFDRLEHVESSLITMYSRCQRMSSAYRLFRTCSTQSVVIWNSLLA 359
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G+ ++ EA LF EM +V + VT
Sbjct: 360 GFGFMDQVEEAILLFREMIYSSVFP-------------------------------NDVT 388
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ +L++ A + G+E+H +I ++ ++ + N+L+DMY K + +A+ F QM
Sbjct: 389 VLTMLSLSARFGHLCHGREMHCYIIKHGLGASNILQNSLVDMYSKSRQMAAAQRVFDQM- 447
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
Q +D+ ++ +++ GY + + ++ F EM + T +L+AC++ + QG+
Sbjct: 448 QCQDRHAYTSLILGYGMQREGHLSLKLFDEMIANNIKVDHVTMVAVLSACSHSGLVTQGQ 507
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+R +V C VE ++ C ++ + C +L
Sbjct: 508 ------LRFAEMFDVFCIAPRVEHFS--CMVD--------------LYCREGLLSMAEE- 544
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL---ALQFFDSMRCKYGIIPQL 614
++ K ++P ++ AC G ++ A + +MR
Sbjct: 545 ----------IINKMPLQPTAAMLATLIEACRIHGKTEIGDRAAKRLLAMRTN-----NP 589
Query: 615 EHYECMIKLYC---RYGYMKELEDFVNRMPFN--PTVPMLRKIFDKC 656
HY+ + +Y R+ + +L ++ M N PT +L +D C
Sbjct: 590 GHYKSIANMYISAKRWPELAKLRSLMSVMELNMIPTRSLLESEYDIC 636
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 147/329 (44%), Gaps = 32/329 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + R++E + ++ +++ N + Y KC ++DAR +FD MP
Sbjct: 155 YPSVLRACGELRDASVGREIEQRVRSWGYGLDMYVWNALVGMYAKCEEMEDARRVFDGMP 214
Query: 105 ERDGGSWNAMLGAYTQNG-----------FPG--------------------RTLELFLD 133
RD SWNAM+ Y G FPG + L
Sbjct: 215 ARDVVSWNAMVSGYASAGMWGEAFDLLQWFPGANIVTWNAVAAGNLKAGNDSEVIRLLSQ 274
Query: 134 M-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M + G + +T LR+ A L + K+LH + ++ F +ESSL+ Y +C
Sbjct: 275 MRSFHGPGLDSVTVVIGLRACARSGYLKIGKELHAVSIRLRFDRLEHVESSLITMYSRCQ 334
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
M+ A R+F ++ V WN ++ + +EA+++F +M+ + P + T L
Sbjct: 335 RMSSAYRLFRTCSTQSVVIWNSLLAGFGFMDQVEEAILLFREMIYSSVFPNDVTVLTMLS 394
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+ G ++H IIK +++ SL +MY K ++ A+ + DQ ++ +
Sbjct: 395 LSARFGHLCHGREMHCYIIKHGLGASNILQNSLVDMYSKSRQMAAAQRVFDQMQCQDRHA 454
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNV 341
+TS++ GY + + +LF+EM N+
Sbjct: 455 YTSLILGYGMQREGHLSLKLFDEMIANNI 483
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE---LFLDMNHSGVS 140
I Y +C + A LF + WN++L + GF + E LF +M +S V
Sbjct: 327 ITMYSRCQRMSSAYRLFRTCSTQSVVIWNSLLAGF---GFMDQVEEAILLFREMIYSSVF 383
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N +T +L SA L +++H I+K G + IL++SLVD Y K M A+R+
Sbjct: 384 PNDVTVLTMLSLSARFGHLCHGREMHCYIIKHGLGASNILQNSLVDMYSKSRQMAAAQRV 443
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
FD +Q ++ ++ ++ Y + G ++ +F +M+ +I+ + T L ACS
Sbjct: 444 FDQMQCQDRHAYTSLILGYGMQREGHLSLKLFDEMIANNIKVDHVTMVAVLSACS 498
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 290/613 (47%), Gaps = 36/613 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I G GN+D A +FD+M ERD SWN++ AY QNG + +F M
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T + +L + +HGL+VK GF V + ++L+ Y +A +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + K+ +SWN ++ ++ G +A+ + M+ TF +AL AC F
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC-FTPDF 377
Query: 261 YE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+E G +HG+++ + ++ +L MY K G +
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS----------------------- 414
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
E+R + +MP R+V++WNA++ GY +AL MR + +T+
Sbjct: 415 --------ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466
Query: 380 GLILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L+ C ++ + GK +H +I + S+ V N+L+ MY KCG+L S++ F +
Sbjct: 467 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 526
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGK 497
R + ++WNA+L A G EE + S+M+ + +F+F L+A A ++ LE+G+
Sbjct: 527 NR-NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 585
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H ++ +E + A ++Y+KC + +++ S + + N +I +
Sbjct: 586 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 645
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
E F M + GIKP H+TF +L AC H G V L ++D + +G+ P +EH
Sbjct: 646 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 705
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C+I L R G + E E F+++MP P + R + C+ +G G AA L++L P
Sbjct: 706 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 765
Query: 678 WAPFQFKITTNRF 690
+ +++N F
Sbjct: 766 EDDSVYVLSSNMF 778
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 254/556 (45%), Gaps = 38/556 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y K G + AR LFD MP R+ SWN M+ + G +E F M G+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 147 ANVLRS---SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
A+++ + S GV Q+HG + K G +V + ++++ YG +++ +R++F++
Sbjct: 62 ASLVTACGRSGSMFREGV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ ++N VSW ++ Y G +E + ++ M E + + + + +C L G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QI G ++K E V SL M G ++ A + DQ ER+ ISW SI + YA +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G I E+ +F+ LMR+ +++ T+ +L
Sbjct: 240 GHIEESFRIFS-------------------------------LMRRFHDEVNSTTVSTLL 268
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
+V + K G+ +HG + + + S + V N LL MY G A + F QM +D
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDL 327
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCF 502
+SWN+++ + G+S +A+ M + + TF + LAAC E+G+ +H
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 387
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
V+ + N + ALV +Y K + + RV + DV+ N++I G+ +E +A
Sbjct: 388 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L F M+ EG+ ++IT +L AC+ G++ + + G +I
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507
Query: 623 LYCRYGYMKELEDFVN 638
+Y + G + +D N
Sbjct: 508 MYAKCGDLSSSQDLFN 523
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 148/594 (24%), Positives = 269/594 (45%), Gaps = 50/594 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + YG G + +R +F+EMP+R+ SW +++ Y+ G P ++++ M
Sbjct: 94 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG 153
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV N+ + + V+ S + + +Q+ G +VK G + +E+SL+ G +
Sbjct: 154 EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 213
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD + ++ +SWN I Y G+ +E+ +F M R + T + L
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G IHG+++K+ F+ V +L MY GR +A + Q +++ISW S+
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ + G RSL +AL + M + K ++
Sbjct: 334 MASFVNDG----------------------------RSL---DALGLLCSMISSGKSVNY 362
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT L C + G+ +HG + + N + NAL+ MY K G + +R Q
Sbjct: 363 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISS-LE 494
M RRD V+WNA++ GYA ++A+ +F M+ E S + T ++L+AC LE
Sbjct: 423 MP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK +H +++ +E + + +L+ +Y KC L + +F + ++I N+M+
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVKLALQFFDSMRCKYG 609
H+ G E L++ M+ G+ D +F L LA + EG Q + K G
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG------QQLHGLAVKLG 595
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGY 661
+ +Y + G E+ + V +P N ++P + ++GY
Sbjct: 596 FEHDSFIFNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 223/520 (42%), Gaps = 67/520 (12%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + Y G +A +F +MP +D SWN+++ ++ +G L L M
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG S N +T+ + L + + LHGL+V G N I+ ++LV YGK M++
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+RR+ + ++ V+WN ++ Y + +A+ F M E + T + L AC
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 257 LSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
E G +H I+ FE D+ V SL MY KCG L ++ L + D RNII+W
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW-- 533
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
NAMLA +E L V MR +D
Sbjct: 534 -----------------------------NAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 564
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
Q + L+ A L+ ++ G+++HG + + + F+ NA DMY KCG + +
Sbjct: 565 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV-VKML 623
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
S R SWN +++ R G EE +F EM + +P TF +LL AC++ ++
Sbjct: 624 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G + + R+ F +++ IC +LG
Sbjct: 684 KGLAYYDMIARD----------------------------FGLEPAIEHCICVIDLLG-- 713
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
GR A E + K +KP+ + + +L +C GN+
Sbjct: 714 --RSGRLA-EAETFISKMPMKPNDLVWRSLLASCKIHGNL 750
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 219/462 (47%), Gaps = 47/462 (10%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K + AR +FD + +N VSWN ++ + G E + F KM I+P +F
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 248 ANALFACSFLSSPY-EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
A+ + AC S + EG+Q+HG + K G L+++YV
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKS---------GLLSDVYVS--------------- 97
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
T+I+ Y + G + +R++F EMP+RNV+SW +++ GY+ +E +D
Sbjct: 98 -------TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MR ++ ++ L+++ C L + +G+++ G + ++ S + V N+L+ M GN
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA 485
+ A F QMS+ RD +SWN++ YA+ G EE+ FS M ++ + T TLL+
Sbjct: 211 VDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
++ + G+ IH V++ ++ V L+ +Y A VFK+ + D+I
Sbjct: 270 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 329
Query: 546 CNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
NS++ F ++ R +AL + M G +++TF L AC FF+ R
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC-------FTPDFFEKGR 382
Query: 606 CKYGIIPQLEHY------ECMIKLYCRYGYMKELEDFVNRMP 641
+G++ + ++ +Y + G M E + +MP
Sbjct: 383 ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+ S + V+Y + C + + R L +V + N + YGK G +
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS- 152
++R + +MP RD +WNA++G Y ++ P + L F M GVS+N IT +VL +
Sbjct: 414 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Query: 153 --SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ LE G K LH IV GF + +++SL+ Y KC ++ ++ +F+ + N+N +
Sbjct: 474 LLPGDLLERG--KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+WN ++ G+G+E + + KM + F+F+ L A + L+ EG Q+HG+
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K+ FE D + + +MY KCG + + +L R++ SW ++S G E
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651
Query: 331 ELFNEMPERNV 341
F+EM E +
Sbjct: 652 ATFHEMLEMGI 662
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 32/285 (11%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY K GR++ AR L D RN +SW +++SG G E E F +M + +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI------ 54
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
K V L+ S + G +VHGF+ ++
Sbjct: 55 ------------------------KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGL 90
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S+++VS A+L +Y G + +R F +M R+ VSW +++ GY+ +G+ EE + +
Sbjct: 91 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYK 149
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ E ++ + ++++C + G+QI V+++ E + +L+ +
Sbjct: 150 GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
++YA +F + S D I NS+ + N E+ +F LM++
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 129/319 (40%), Gaps = 50/319 (15%)
Query: 51 LCASSKAIV--EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
L A++K V E ++L V F+ N A + Y KCG + + + R
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWN ++ A ++G+ F +M G+ +T+ ++L + + HG
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-----------HGG 680
Query: 169 IVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+V +G + + + L A C+ + D ++ R +G
Sbjct: 681 LVDKGLAYYDMIARDFGLEPAIEHCICVID------------------LLGR---SGRLA 719
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA KM ++P + + + L +C + G + + K++ E D V + S +
Sbjct: 720 EAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS-S 775
Query: 287 EMYVKCGRLEDARGLLDQPDERNI-----ISWTSI---VSGYAISGRIR-EARELFNEMP 337
M+ GR ED + Q +NI SW + VS + I R + E++ ++
Sbjct: 776 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 835
Query: 338 E-RNVISWNAMLAGYTRSL 355
+ + +I + +A +++L
Sbjct: 836 DIKKLIKESGYVADTSQAL 854
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 290/613 (47%), Gaps = 36/613 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I G GN+D A +FD+M ERD SWN++ AY QNG + +F M
Sbjct: 289 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 348
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T + +L + +HGL+VK GF V + ++L+ Y +A +
Sbjct: 349 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 408
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + K+ +SWN ++ ++ G +A+ + M+ TF +AL AC F
Sbjct: 409 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC-FTPDF 467
Query: 261 YE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+E G +HG+++ + ++ +L MY K G +
Sbjct: 468 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS----------------------- 504
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
E+R + +MP R+V++WNA++ GY +AL MR + +T+
Sbjct: 505 --------ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 556
Query: 380 GLILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L+ C ++ + GK +H +I + S+ V N+L+ MY KCG+L S++ F +
Sbjct: 557 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 616
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGK 497
R + ++WNA+L A G EE + S+M+ + +F+F L+A A ++ LE+G+
Sbjct: 617 NR-NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 675
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H ++ +E + A ++Y+KC + +++ S + + N +I +
Sbjct: 676 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 735
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
E F M + GIKP H+TF +L AC H G V L ++D + +G+ P +EH
Sbjct: 736 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 795
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C+I L R G + E E F+++MP P + R + C+ +G G AA L++L P
Sbjct: 796 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 855
Query: 678 WAPFQFKITTNRF 690
+ +++N F
Sbjct: 856 EDDSVYVLSSNMF 868
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 248/566 (43%), Gaps = 63/566 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V N I Y K G + AR LFD MP R+ SWN M+ + G +E F M
Sbjct: 107 VLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD 166
Query: 137 SGVSANQITYANVLRS---SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G+ + A+++ + S GV Q+HG + K G +V + ++++ YG +
Sbjct: 167 LGIKPSSFVIASLVTACGRSGSMFREGV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGL 224
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
++ +R++F+++ ++N VSW ++ Y G +E + ++
Sbjct: 225 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY--------------------- 263
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
G QI G ++K E V SL M G ++ A + DQ ER+ ISW
Sbjct: 264 ----KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 319
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
SI + YA +G I E+ +F+ LMR+ +
Sbjct: 320 NSIAAAYAQNGHIEESFRIFS-------------------------------LMRRFHDE 348
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++ T+ +L+V + K G+ +HG + + + S + V N LL MY G A +
Sbjct: 349 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 408
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISS 492
F QM +D +SWN+++ + G+S +A+ M + + TF + LAAC
Sbjct: 409 FKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E+G+ +H V+ + N + ALV +Y K + + RV + DV+ N++I G
Sbjct: 468 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 527
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ +E +AL F M+ EG+ ++IT +L AC+ G++ + + G
Sbjct: 528 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 587
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVN 638
+I +Y + G + +D N
Sbjct: 588 DEHVKNSLITMYAKCGDLSSSQDLFN 613
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/594 (24%), Positives = 260/594 (43%), Gaps = 75/594 (12%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + YG G + +R +F+EMP+R+ SW +++ Y+ G P ++++ D +
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDES- 267
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ +Q+ G +VK G + +E+SL+ G +
Sbjct: 268 ------------------------LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 303
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD + ++ +SWN I Y G+ +E+ +F M R + T + L
Sbjct: 304 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 363
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G IHG+++K+ F+ V +L MY GR +A + Q +++ISW S+
Sbjct: 364 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 423
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ + G RSL +AL + M + K ++
Sbjct: 424 MASFVNDG----------------------------RSL---DALGLLCSMISSGKSVNY 452
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT L C + G+ +HG + + N + NAL+ MY K G + +R Q
Sbjct: 453 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 512
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISS-LE 494
M RRD V+WNA++ GYA ++A+ +F M+ E S + T ++L+AC LE
Sbjct: 513 MP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 571
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK +H +++ +E + + +L+ +Y KC L + +F + ++I N+M+
Sbjct: 572 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 631
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVKLALQFFDSMRCKYG 609
H+ G E L++ M+ G+ D +F L LA + EG Q + K G
Sbjct: 632 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG------QQLHGLAVKLG 685
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGY 661
+ +Y + G E+ + V +P N ++P + ++GY
Sbjct: 686 FEHDSFIFNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISALGRHGY 736
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 223/520 (42%), Gaps = 67/520 (12%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + Y G +A +F +MP +D SWN+++ ++ +G L L M
Sbjct: 386 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 445
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG S N +T+ + L + + LHGL+V G N I+ ++LV YGK M++
Sbjct: 446 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 505
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+RR+ + ++ V+WN ++ Y + +A+ F M E + T + L AC
Sbjct: 506 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 565
Query: 257 LSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
E G +H I+ FE D+ V SL MY KCG L ++ L + D RNII+W
Sbjct: 566 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW-- 623
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
NAMLA +E L V MR +D
Sbjct: 624 -----------------------------NAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 654
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
Q + L+ A L+ ++ G+++HG + + + F+ NA DMY KCG + +
Sbjct: 655 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV-VKML 713
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
S R SWN +++ R G EE +F EM + +P TF +LL AC++ ++
Sbjct: 714 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 773
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G + + R+ F +++ IC +LG
Sbjct: 774 KGLAYYDMIARD----------------------------FGLEPAIEHCICVIDLLG-- 803
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
GR A E + K +KP+ + + +L +C GN+
Sbjct: 804 --RSGRLA-EAETFISKMPMKPNDLVWRSLLASCKIHGNL 840
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+ S + V+Y + C + + R L +V + N + YGK G +
Sbjct: 444 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 503
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS- 152
++R + +MP RD +WNA++G Y ++ P + L F M GVS+N IT +VL +
Sbjct: 504 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563
Query: 153 --SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ LE G K LH IV GF + +++SL+ Y KC ++ ++ +F+ + N+N +
Sbjct: 564 LLPGDLLERG--KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 621
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+WN ++ G+G+E + + KM + F+F+ L A + L+ EG Q+HG+
Sbjct: 622 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K+ FE D + + +MY KCG + + +L R++ SW ++S G E
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 741
Query: 331 ELFNEMPERNV 341
F+EM E +
Sbjct: 742 ATFHEMLEMGI 752
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 26/264 (9%)
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+++ ++++ Y GR++ AR LF+ MP RN +SWN M++G R L+ E ++F M
Sbjct: 106 SVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC 165
Query: 369 KTTKDIDQVTLGLILNVCA-GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ ++ C S + G +VHGF+ ++ S+++VS A+L +Y G +
Sbjct: 166 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 225
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
+R F +M R+ VSW +++ GY+ +G+ EE + + + E+L
Sbjct: 226 SCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKD------------ESL---- 268
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
G+QI V+++ E + +L+ + ++YA +F + S D I N
Sbjct: 269 --------GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 320
Query: 548 SMILGFCHNERGREALEVFGLMKK 571
S+ + N E+ +F LM++
Sbjct: 321 SIAAAYAQNGHIEESFRIFSLMRR 344
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 180/433 (41%), Gaps = 63/433 (14%)
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G +H + +K + +L MY K GR++ AR L D RN +SW +++SG
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 323 SGRIREARELFNEM------PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT--TKDI 374
G E E F +M P VI+ G + S +++E + + K+ D+
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGS-MFREGVQVHGFVAKSGLLSDV 209
Query: 375 DQVTLGLILNVCAGL---------------------------------------SEIKMG 395
T L L GL + +G
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLG 269
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++ G + ++ S + V N+L+ M GN+ A F QMS+ RD +SWN++ YA+
Sbjct: 270 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQ 328
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G EE+ FS M ++ + T TLL+ ++ + G+ IH V++ ++ V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 388
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
L+ +Y A VFK+ + D+I NS++ F ++ R +AL + M G
Sbjct: 389 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 448
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY------ECMIKLYCRYG 628
+++TF L AC FF+ R +G++ + ++ +Y + G
Sbjct: 449 SVNYVTFTSALAAC-------FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 501
Query: 629 YMKELEDFVNRMP 641
M E + +MP
Sbjct: 502 EMSESRRVLLQMP 514
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 129/319 (40%), Gaps = 50/319 (15%)
Query: 51 LCASSKAIV--EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
L A++K V E ++L V F+ N A + Y KCG + + + R
Sbjct: 662 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 721
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWN ++ A ++G+ F +M G+ +T+ ++L + + HG
Sbjct: 722 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-----------HGG 770
Query: 169 IVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+V +G + + + L A C+ + D ++ R +G
Sbjct: 771 LVDKGLAYYDMIARDFGLEPAIEHCICVID------------------LLGR---SGRLA 809
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA KM ++P + + + L +C + G + + K++ E D V + S +
Sbjct: 810 EAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS-S 865
Query: 287 EMYVKCGRLEDARGLLDQPDERNI-----ISWTSI---VSGYAISGRIR-EARELFNEMP 337
M+ GR ED + Q +NI SW + VS + I R + E++ ++
Sbjct: 866 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 925
Query: 338 E-RNVISWNAMLAGYTRSL 355
+ + +I + +A +++L
Sbjct: 926 DIKKLIKESGYVADTSQAL 944
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 252/500 (50%), Gaps = 40/500 (8%)
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LV+ Y K + A+ + + V+W ++ + A++ F M RE + P
Sbjct: 49 LVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPN 108
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
+FTF A + L P G Q+H + +K G++ +++V C
Sbjct: 109 DFTFPCVFKASASLHMPVTGKQLHALALKG---------GNILDVFVGC----------- 148
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
S Y+ +G EAR +F+EMP RN+ +WNA ++ + LD
Sbjct: 149 -----------SAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQD---GRCLDA 194
Query: 364 VFLMRK---TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+ +K + + +T LN CA + +++G+++HGFI R+ Y ++ V N L+D
Sbjct: 195 IAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDF 254
Query: 421 YRKCGNLRSARIWFYQM-SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFT 479
Y KCG++ S+ + F ++ S RR+ VSW ++L + + E A F + + E P+ F
Sbjct: 255 YGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFM 314
Query: 480 FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
++L+ACA + LE G+ +H ++ C E N+ ALV++Y KC +EYA +VF+E
Sbjct: 315 ISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP 374
Query: 540 SLDVIICNSMILGFCHNERGREALEVFGLMKKE--GIKPDHITFHGILLACIHEGNVKLA 597
+++ N+MI G+ H AL +F M GI ++T +L AC G V+
Sbjct: 375 ERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERG 434
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
LQ F+SMR +YGI P EHY C++ L R G + +F+ RMP PT+ + + C+
Sbjct: 435 LQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACK 494
Query: 658 KNGYATLGEWAARRLNELNP 677
+G LG+ AA +L EL+P
Sbjct: 495 MHGKTKLGKIAAEKLFELDP 514
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 242/556 (43%), Gaps = 41/556 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTP-PVFLLNRAIECYGKCGNLDDAR 97
P +L + S++ + R + ++++ + TP P FL N + Y K + A+
Sbjct: 4 PRPPNLLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQ 63
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ R +W +++ N L F +M V N T+ V ++SA
Sbjct: 64 LVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLH 123
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
KQLH L +K G +V + S D Y K + +AR MFD++ ++N +WN +
Sbjct: 124 MPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMS 183
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G +A+ F K L D P TF L AC+ + S G Q+HG I++ +
Sbjct: 184 NAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYRE 243
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V L + Y KCG IVS + RI R
Sbjct: 244 DVSVFNGLIDFYGKCG---------------------DIVSSELVFSRIGSGR------- 275
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
RNV+SW ++LA ++ + A VFL + + + +L+ CA L +++G+
Sbjct: 276 -RNVVSWCSLLAALVQNHEEERAC-MVFLQARKEVEPTDFMISSVLSACAELGGLELGRS 333
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + NIFV +AL+D+Y KCG++ A F +M + R+ V+WNA++ GYA G
Sbjct: 334 VHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPE-RNLVTWNAMIGGYAHLG 392
Query: 458 QSEEAMTSFSEMQWETRPSKFTFETL---LAACANISSLEQGKQI-HCFVIRNCYEINVV 513
+ A++ F EM + ++ TL L+AC+ ++E+G QI R E
Sbjct: 393 DVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAE 452
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+V++ + ++ A K L I +LG C G+ L K
Sbjct: 453 HYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGAC-KMHGKTKLGKIAAEKLFE 511
Query: 574 IKPD----HITFHGIL 585
+ PD H+ F +L
Sbjct: 512 LDPDDSGNHVVFSNML 527
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 183/418 (43%), Gaps = 32/418 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP + + A L CA ++ R+L +V V + N I+ YGKCG++ +
Sbjct: 207 EPNAITFCAFL-NACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSE 265
Query: 98 GLFDEMPE--RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+F + R+ SW ++L A QN R +FL V ++VL + AE
Sbjct: 266 LVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAE 324
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L + + +H L +K N+ + S+LVD YGKC + A ++F ++ +N V+WN +
Sbjct: 325 LGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAM 384
Query: 216 VRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACSFLSSPYEGMQI-HGVIIK 272
+ Y G+ A+ +F +M I T + L ACS + G+QI + +
Sbjct: 385 IGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGR 444
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIR---- 327
E + ++ + G ++ A + + P I W +++ + G+ +
Sbjct: 445 YGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKI 504
Query: 328 EARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
A +LF P+ N + ++ MLA R W+EA ++RK +DI G+ NV
Sbjct: 505 AAEKLFELDPDDSGNHVVFSNMLASAGR---WEEAT----IVRKEMRDI-----GIKKNV 552
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR----KCGNLRSARIWFYQMSQ 439
G S + + VH F ++ + A+L R K G + A + + + +
Sbjct: 553 --GYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEE 608
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + + + + CA + R + + + +F+ + ++ YGKCG+++
Sbjct: 306 KEVEPTDF-MISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIE 364
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS--GVSANQITYANVL-- 150
A +F EMPER+ +WNAM+G Y G L LF +M G++ + +T +VL
Sbjct: 365 YAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSA 424
Query: 151 --RSSAEELELGVSKQLHG 167
R+ A E L + + + G
Sbjct: 425 CSRAGAVERGLQIFESMRG 443
>gi|255545590|ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546941|gb|EEF48438.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 264/514 (51%), Gaps = 36/514 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ N I Y + G L +AR +FD+M ER SW AM+ Y G L LF ++
Sbjct: 1 MYVDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIE 60
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+GV+AN T+ +L ++ L+ + +Q+H +VK G N+I++S++V Y +C +
Sbjct: 61 NGVTANNRTFVCILNVCSKRLDFELGRQIHACVVK-GNWRNLIVDSAIVSFYAQCGDLES 119
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A F ++ K+ V W ++ G G+EA MF +ML E P FT L AC
Sbjct: 120 AFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGE 179
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ G Q+H I+K ++ DDV +G SL +MY KC
Sbjct: 180 KKALKFGRQLHCAIVKGMYK-DDVFIGTSLVDMYAKC----------------------- 215
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
G + +++E+F+ M +RN ++W +++AGY R L +EA+ +M++ +
Sbjct: 216 --------GEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKIISN 267
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+T+ +L C +S G+EVH I ++ SN+++ + L+ Y KCG A
Sbjct: 268 NLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQ 327
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
QMS R+ VSW A+++GY G EA+ EM E P++FT+ + L ACAN+ S+
Sbjct: 328 QMS-FRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVL 386
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QGK IH F + NV AL+ +Y+KC L AI+VF ++I +MIL +
Sbjct: 387 QGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYA 446
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
N REAL++ M+ EGI+ D + ++ +C
Sbjct: 447 RNGLCREALKLMYRMQAEGIEVDDYIYASVMGSC 480
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 146/294 (49%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C KA+ R+L +V VF+ ++ Y KCG + D++ +FD M +R+
Sbjct: 173 ILKACGEKKALKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRN 232
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+W +++ Y + G + LF M + +N +T +VLR+ +++H
Sbjct: 233 TVTWTSIIAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHA 292
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K G NV L S+LV Y KC A ++ + +N VSW ++ Y+ G E
Sbjct: 293 QIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFE 352
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +M+ E + P FT+++AL AC+ L S +G IH K + V +L
Sbjct: 353 ALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSALIY 412
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
MY KCG L DA + D ERN+ISW +++ YA +G REA +L M +
Sbjct: 413 MYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLCREALKLMYRMQAEGI 466
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + C S A + R++ + ++ V+L + + Y KCG + A + +M R+
Sbjct: 274 VLRACGSISASLTGREVHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRN 333
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW AM+ Y G+ LE +M GV N+ TY++ L++ A + K +H
Sbjct: 334 VVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVLQGKLIHS 393
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
K NV + S+L+ Y KC ++DA ++FD + +N +SW ++ Y G +E
Sbjct: 394 FANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGLCRE 453
Query: 228 AVVMFFKMLREDIRPLNFTFANALFAC 254
A+ + ++M E I ++ +A+ + +C
Sbjct: 454 ALKLMYRMQAEGIEVDDYIYASVMGSC 480
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 122/266 (45%), Gaps = 18/266 (6%)
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM- 469
++V N L+ +Y + G L AR F QM +R VSW A++ GY G +EA+ FSE+
Sbjct: 1 MYVDNNLISVYARLGELIEARKVFDQMHER-CVVSWTAMINGYVSFGLDDEALRLFSELI 59
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+ + TF +L C+ E G+QIH V++ + N++ A+V Y +C LE
Sbjct: 60 ENGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWR-NLIVDSAIVSFYAQCGDLE 118
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A F + DV+ S+I RG EA +F M EG P+ T IL AC
Sbjct: 119 SAFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKAC- 177
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYEC-----MIKLYCRYGYMKELEDFVNRMPFNP 644
K AL+F + C I+ + + ++ +Y + G M + ++ + M
Sbjct: 178 ---GEKKALKFGRQLHC--AIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRN 232
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAAR 670
TV I RK LGE A R
Sbjct: 233 TVTWTSIIAGYARKG----LGEEAIR 254
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP ++ Y+ + CA+ +++++ + + S + V++ + I Y KCG L DA
Sbjct: 366 EPNEFT-YSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSDAI 424
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+FD MPER+ SW M+ +Y +NG L+L M G+ + YA+V+ S +
Sbjct: 425 QVFDSMPERNLISWKTMILSYARNGLCREALKLMYRMQAEGIEVDDYIYASVMGSCGD 482
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 275/569 (48%), Gaps = 47/569 (8%)
Query: 124 PGRTLEL--FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
P R L++ + M G + Y +L E LG ++ +HG + K G ++ +
Sbjct: 57 PLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVA 116
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+SLV+AY +C DARR+FD + +N V+W +V Y + + +F +ML
Sbjct: 117 TSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRY 176
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P ++T L AC G Q+HG IK E + SL +Y K G L+
Sbjct: 177 PSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLD----- 231
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE-A 360
A F +PE+NVI+W M++ E
Sbjct: 232 --------------------------SALRAFWRIPEKNVITWTTMISACAEDEECVELG 265
Query: 361 LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+ M ++ TL ++++C ++ +GK+V F + +N+ V N+ + +
Sbjct: 266 MSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYL 325
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR-----------RGQSEEAMTSFSEM 469
Y + G A F QM + ++WNA+++GYA+ R + +A+T F ++
Sbjct: 326 YLRKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDL 384
Query: 470 QWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ +P FTF ++L+ C+ + +LEQG+QIH I++ + +VV ALV +Y KC C+
Sbjct: 385 KRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCI 444
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ A + F E + + SMI G+ + + +EA+++F M+ G++P+ ITF +L AC
Sbjct: 445 QDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC 504
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ G V+ A +FD M+ +Y I P ++HY CMI ++ R G +++ F+ R F P +
Sbjct: 505 SYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAI 564
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ CR +G L +AA +L EL P
Sbjct: 565 WSSLVAGCRSHGNMELAFYAADKLLELKP 593
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/577 (24%), Positives = 267/577 (46%), Gaps = 64/577 (11%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L + V ++Y L C + ++ AR + ++ + +F+ + Y +C
Sbjct: 70 LTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAA 129
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
DAR LFD MPER+ +W A++ YT N P LE+F++M G + T L +
Sbjct: 130 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 189
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
++ + KQ+HG +K G + +SL Y K + A R F I KN ++W
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 249
Query: 214 VIVRRYLVAGNGKEAV----VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
++ +E V +F ML + + P FT + + C G Q+
Sbjct: 250 TMIS---ACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
KI E + V S +Y++ G ++A L +Q ++ +II+W +++SGYA +I ++
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA---QIMDS 363
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+ +++ R+ G+ +AL ++++ D T IL+VC+ +
Sbjct: 364 AK--DDLQARS--------RGF-------QALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++ G+++H ++ + S++ V++AL++MY KCG ++ A F +M R V+W ++
Sbjct: 407 MALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT-FVTWTSM 465
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-C 507
++GY++ GQ +EA+ F EM+ RP++ TF +LL+AC+ +E+ + + + C
Sbjct: 466 ISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYC 525
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E V G +++++ + +E + F
Sbjct: 526 IEPVVDHYGCMIDMFVRLGRVE----------------------------------DAFS 551
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+K+ G +P+ + ++ C GN++LA D +
Sbjct: 552 FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKL 588
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 281/570 (49%), Gaps = 63/570 (11%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG----- 223
IVK ++++ + ++ AY + + AR +FD++ +N VSW+ ++ + G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 224 ------------------------NGK--EAVVMFFKMLREDIRPLNFTFANALFACSFL 257
NG EA+ +FF++L +RP + TF + + AC L
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
GM I G+++K FE V SL + ++ G ++ AR + D+ ++R+++SWT+I+
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
Y +G +REAR +F+EMPERN ISW+AM+A Y++S +EAL M + +
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF--- 434
L+ A L + G +HG + + ++F+ ++L+D+Y KCG R+ F
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 435 --------------YQMSQR-------------RDKVSWNAVLTGYARRGQSEEAMTSFS 467
Y ++ R ++ VSW ++ GY Q E+ + F+
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFN 437
Query: 468 EMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+ + P+K TF ++L ACA+I+SL++G +H +I+ + ++ AL ++Y KC
Sbjct: 438 TLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGIL 585
+ + +VF+ + I MI G + E+L +F M++ + P+ + +L
Sbjct: 498 DIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V L +F+SM YGI P+ +HY C++ L R G + E E+F+ +PF P
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ C+K + E A++L +L
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQL 647
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 264/528 (50%), Gaps = 76/528 (14%)
Query: 44 LYAHLFQLCASSKAIVEARKLE-----------SNLVTFYPTPPVFLLNRAIECYGKCGN 92
L+AHL + SS+ + + L +V + + + N I Y + GN
Sbjct: 43 LHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGN 102
Query: 93 LDDARGLFDEMPERDGGSWNAMLGA-------------------------------YTQN 121
L AR LFDEMPER+ SW+A++ + +N
Sbjct: 103 LVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
G L+LF + SGV N +T+ +V+R+ E + G+ + GL+VK GF + +
Sbjct: 163 GLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVS 222
Query: 182 SSLV-------------------------------DAYGKCMVMTDARRMFDDIQNKNAV 210
+SL+ DAY + + +ARR+FD++ +N +
Sbjct: 223 NSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEI 282
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW+ ++ RY +G +EA+ +F KM++E +P FA L A + L + G+ IHG +
Sbjct: 283 SWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHV 342
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
KI + D + SL ++Y KCG+ +D R + D E+N++ W S+V GY+I+GR+ E
Sbjct: 343 TKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETE 402
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
ELF +PE+N +SW ++AGY + ++ L+ + + + ++ T +L CA ++
Sbjct: 403 ELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G VHG I + +IFV AL DMY KCG++ S++ F +M + ++++SW ++
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPE-KNEISWTVMI 521
Query: 451 TGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQG 496
G A G + E++ F EM+ E P++ ++L AC++ +++G
Sbjct: 522 QGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKG 569
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 195/474 (41%), Gaps = 96/474 (20%)
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+G +H +IK F + L +Y+ C + + ++ + D +++ ++S Y
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 322 ISGRIREARELFNEMPER-------------------------------NVISWNAMLAG 350
G + +AR LF+EMPER NV+SW A ++G
Sbjct: 99 QWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG 158
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ R+ L EAL F + ++ + VT ++ C L + +G + G + + +
Sbjct: 159 FVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHY 218
Query: 411 IFVSN-------------------------------ALLDMYRKCGNLRSARIWFYQMSQ 439
+ VSN A+LD Y + G+LR AR F +M +
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R+++SW+A++ Y++ G +EEA+ FS+M E +P+ F L+A A++ +L G
Sbjct: 279 -RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM--------- 549
IH V + + +V +L+++Y KC + VF +V+ NSM
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 550 ----------------------ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
I G+ NE+ + LEVF + G P+ TF +L A
Sbjct: 398 LEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
C ++ + + K GI + + +Y + G + + RMP
Sbjct: 458 CASIASLDKGMNVHGKI-IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP 510
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 185/423 (43%), Gaps = 53/423 (12%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A AS +A+ + ++ VF+ + I+ Y KCG DD R +FD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 103 MPERDGGSWNAMLGAYTQNG-----------FPGR--------------------TLELF 131
+ E++ WN+M+G Y+ NG P + LE+F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ SG + N+ T+++VL + A L +HG I+K G ++ + ++L D Y KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANA 250
+ ++++F+ + KN +SW V+++ +G E++++F +M R ++ P +
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 251 LFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDER 308
LFACS +G+ + K+ + + ++ + GRL +A + P +
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQP 616
Query: 309 NIISWTSIVSGYA--ISGRI--REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+W +++SG +I R A++L+ ++ E N + + Y + W + +
Sbjct: 617 EANAWAALLSGCKKYKDEKIAERTAKKLW-QLAENNSAGYVLLSNIYASAGRWIDVSNIR 675
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN---DYSSNIFVSNALLDMY 421
LMR+ L G S +++ +VH F + S+ I+ + LL
Sbjct: 676 KLMREKG-----------LKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSE 724
Query: 422 RKC 424
KC
Sbjct: 725 MKC 727
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S + + S ++ + CAS ++ + + ++ +F+ + Y KCG++
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVL 150
++ +F+ MPE++ SW M+ ++GF +L LF +M S V+ N++ +VL
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
>gi|357117671|ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 245/496 (49%), Gaps = 34/496 (6%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR--EDIRPLNFTFANALFAC 254
A R FDD+ +++ V+ + I+ +L AG + A+ ML + + P + A+ AC
Sbjct: 90 ALRAFDDLPHRDVVAHSSILAAFLRAGLPRRALQSLRSMLAGADGVFPNAHALSAAVKAC 149
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+ L G +HGVI+ + DD+VL +L +MY DAR ++ + I +T
Sbjct: 150 AVLRDRNVGACVHGVILVRGYADDDIVLSALVDMYGHTASPGDARKAFEEMCTPDGICYT 209
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++S + + EA F M RN + +
Sbjct: 210 SLISAFVRNDWFEEAVRWFRTMVTRNGV------------------------------EP 239
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D T G ++ L + G E H + ++ V ++ LDMY KCG + AR F
Sbjct: 240 DGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMMLEARRVF 299
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLE 494
+M Q R+ VSW+A+L GY + + E+ + F +M E S ++ T+L ACA +SS++
Sbjct: 300 DEM-QVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKEYDDS-YSLGTVLRACAGLSSVK 357
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
GK+IHC +RN +VV ALV++Y KC ++YA RVF+ SS + I N+MI GF
Sbjct: 358 PGKEIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIGGFA 417
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
N A+ +F M +EG +PD+I+F G+L AC H G V+ +F+SM YGI P +
Sbjct: 418 QNGHAERAINLFNQMVREGARPDYISFIGVLFACSHNGMVEQGRNYFNSMSKDYGIAPGI 477
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY C++ L R ++E ED +N+ PF+ + I + E A+++ E
Sbjct: 478 EHYNCIVDLLSRVELLEEAEDLINKSPFSNDSSLWAAILGASATQSNPDVAERVAKKMME 537
Query: 675 LNPWAPFQFKITTNRF 690
L P + + N +
Sbjct: 538 LEPQYHLSYILLENVY 553
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 199/402 (49%), Gaps = 38/402 (9%)
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM--NHSGVSANQITYANVLRSSAEEL 157
FD++P RD + +++L A+ + G P R L+ M GV N + +++ A
Sbjct: 94 FDDLPHRDVVAHSSILAAFLRAGLPRRALQSLRSMLAGADGVFPNAHALSAAVKACAVLR 153
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ V +HG+I+ RG+ + I+ S+LVD YG DAR+ F+++ + + + ++
Sbjct: 154 DRNVGACVHGVILVRGYADDDIVLSALVDMYGHTASPGDARKAFEEMCTPDGICYTSLIS 213
Query: 218 RYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
++ +EAV F M+ R + P TF + + A L +G + H ++
Sbjct: 214 AFVRNDWFEEAVRWFRTMVTRNGVEPDGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLC 273
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
G +V S +MY KCG + +AR + D+ RN +SW++++ GY + + LF +M
Sbjct: 274 GSVIVESSTLDMYAKCGMMLEARRVFDEMQVRNAVSWSALLGGYCQNAEYEKVLVLFRQM 333
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+ Y D +LG +L CAGLS +K GK
Sbjct: 334 DKE-----------YD----------------------DSYSLGTVLRACAGLSSVKPGK 360
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E+H RN ++ V +AL+D+Y KCG + A ++ S R+ ++WNA++ G+A+
Sbjct: 361 EIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYA-CRVFEASSVRNTITWNAMIGGFAQN 419
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
G +E A+ F++M E RP +F +L AC++ +EQG+
Sbjct: 420 GHAERAINLFNQMVREGARPDYISFIGVLFACSHNGMVEQGR 461
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 142/260 (54%), Gaps = 3/260 (1%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NH 136
+L+ ++ YG + DAR F+EM DG + +++ A+ +N + + F M
Sbjct: 175 IVLSALVDMYGHTASPGDARKAFEEMCTPDGICYTSLISAFVRNDWFEEAVRWFRTMVTR 234
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+GV + T+ +++ + + H +V RG CG+VI+ESS +D Y KC +M +
Sbjct: 235 NGVEPDGCTFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMMLE 294
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD++Q +NAVSW+ ++ Y ++ +V+F +M +E +++ L AC+
Sbjct: 295 ARRVFDEMQVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKE--YDDSYSLGTVLRACAG 352
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
LSS G +IH ++ D VV +L ++Y KCG ++ A + + RN I+W ++
Sbjct: 353 LSSVKPGKEIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAM 412
Query: 317 VSGYAISGRIREARELFNEM 336
+ G+A +G A LFN+M
Sbjct: 413 IGGFAQNGHAERAINLFNQM 432
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 150/310 (48%), Gaps = 21/310 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + + ++ Y KCG + +AR +FDEM R+ SW+A+LG Y QN + L LF M+
Sbjct: 276 VIVESSTLDMYAKCGMMLEARRVFDEMQVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDK 335
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ + VLR+ A + K++H ++ G +V++ES+LVD Y KC +
Sbjct: 336 E--YDDSYSLGTVLRACAGLSSVKPGKEIHCRFLRNGGWRDVVVESALVDLYAKCGAVDY 393
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A R+F+ +N ++WN ++ + G+ + A+ +F +M+RE RP +F LFACS
Sbjct: 394 ACRVFEASSVRNTITWNAMIGGFAQNGHAERAINLFNQMVREGARPDYISFIGVLFACSH 453
Query: 257 LSSPYEGM-------QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
+G + +G+ I+ V L S E+ LE+A L+++ N
Sbjct: 454 NGMVEQGRNYFNSMSKDYGIAPGIEHYNCIVDLLSRVEL------LEEAEDLINKSPFSN 507
Query: 310 IIS-WTSIVSGYAISGRIREARELFNEMPE---RNVISWNAMLAGYTRSLLWKEALDFVF 365
S W +I+ A A + +M E + +S+ + Y W++A +
Sbjct: 508 DSSLWAAILGASATQSNPDVAERVAKKMMELEPQYHLSYILLENVYRTVGRWEDASEIRR 567
Query: 366 LM--RKTTKD 373
LM RK KD
Sbjct: 568 LMKSRKVKKD 577
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
SYSL + + CA ++ +++ + V + + ++ Y KCG +D A +F
Sbjct: 340 SYSL-GTVLRACAGLSSVKPGKEIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYACRVF 398
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
+ R+ +WNAM+G + QNG R + LF M G + I++ VL
Sbjct: 399 EASSVRNTITWNAMIGGFAQNGHAERAINLFNQMVREGARPDYISFIGVL 448
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 175/666 (26%), Positives = 313/666 (46%), Gaps = 54/666 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ L + A + + +++ +++ F Y V + N + Y KCG+ +FD +
Sbjct: 96 FPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 155
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-----EELE 158
ER+ SWN+++ + LE F M V + T +V + + E L
Sbjct: 156 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLL 215
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+G KQ+H +++G + I+ ++LV YGK + ++ + + ++ V+WN ++
Sbjct: 216 MG--KQVHAYGLRKGELNSFII-NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSS 272
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
EA+ +M+ E + P FT ++ L ACS L G ++H +K +
Sbjct: 273 LCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 332
Query: 279 DVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ +GS L +MY C ++ + D +R I W ++++GYA + EA LF EM
Sbjct: 333 NSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEME 392
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
E +LA T T+ ++ C +
Sbjct: 393 ES-----AGLLANST-------------------------TMAGVVPACVRSGAFSKKEA 422
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HGF+ + + FV NAL+DMY + G + A+ F +M + RD V+WN ++TGY
Sbjct: 423 IHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKM-EDRDLVTWNTIITGYVFSE 481
Query: 458 QSEEAMTSFSEMQWETR------------PSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+ E+A+ +MQ R P+ T T+L +CA +S+L +GK+IH + I+
Sbjct: 482 RHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 541
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
N +V ALV++Y KC CL+ + +VF + +VI N +++ + + ++A+++
Sbjct: 542 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDM 601
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
+M +G+KP+ +TF + AC H G V L+ F +M+ YG+ P +HY C++ L
Sbjct: 602 LRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLG 661
Query: 626 RYGYMKELEDFVNRMPFN-PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFK 684
R G +KE +N +P N + CR + +GE AA+ L +L P +
Sbjct: 662 RAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYV 721
Query: 685 ITTNRF 690
+ N +
Sbjct: 722 LLANIY 727
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 234/493 (47%), Gaps = 45/493 (9%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W +L + ++ + ++DM G+ + + +L++ A+ ++ + KQ+H +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 171 KRGF-CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K G+ +V + ++LV+ Y KC ++FD I +N VSWN ++ + A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F ML ED+ P +FT + ACS P EG+ +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMP-EGLLM----------------------- 216
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
G+ A GL + E N ++V+ Y G++ ++ L R++++WN +L+
Sbjct: 217 ---GKQVHAYGL--RKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLS 271
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYS 408
++ + EAL+++ M + D T+ +L C+ L ++ GKE+H + +N
Sbjct: 272 SLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 331
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
N FV +AL+DMY C + S F M R+ + WNA++TGYA+ EEA+ F E
Sbjct: 332 ENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGL-WNAMITGYAQNEYDEEALLLFIE 390
Query: 469 MQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ + T ++ AC + + + IH FV++ + + + AL+++Y++
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK-----------KEGIK 575
++ A R+F + D++ N++I G+ +ER +AL + M+ + +K
Sbjct: 451 KIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLK 510
Query: 576 PDHITFHGILLAC 588
P+ IT IL +C
Sbjct: 511 PNSITLMTILPSC 523
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 15/256 (5%)
Query: 344 WNAMLAGYTRSLLWKEA----LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
W +L RS L +EA +D + L K D +L A L ++ +GK++H
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKP----DNFAFPALLKAVADLQDMDLGKQIH 116
Query: 400 GFIHRNDYS-SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+++ Y ++ V+N L+++YRKCG+ + F ++S+R ++VSWN++++ +
Sbjct: 117 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER-NQVSWNSLISSLCSFEK 175
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANI---SSLEQGKQIHCFVIRNCYEINVVC 514
E A+ +F M E PS FT ++ AC+N L GKQ+H + +R E+N
Sbjct: 176 WEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFI 234
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
LV +Y K L + + D++ N+++ C NE+ EALE M EG+
Sbjct: 235 INTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGV 294
Query: 575 KPDHITFHGILLACIH 590
+PD T +L AC H
Sbjct: 295 EPDGFTISSVLPACSH 310
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 160/346 (46%), Gaps = 36/346 (10%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM--- 134
F+ N ++ Y + G +D A+ +F +M +RD +WN ++ Y + L + M
Sbjct: 437 FVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQIL 496
Query: 135 --------NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
+ + N IT +L S A L K++H +K +V + S+LVD
Sbjct: 497 ERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 556
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + +R++FD I +N ++WNVIV Y + GN ++A+ M M+ + ++P T
Sbjct: 557 MYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVT 616
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
F + ACS EG++I +K D+ E + ++ + GR+++A L++
Sbjct: 617 FISVFAACSHSGMVNEGLKIF-YNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINL 675
Query: 305 PDERNII---SWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLL 356
RN +W+S++ I + A+ L P NV S +LA Y+ + L
Sbjct: 676 I-PRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGL 732
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W +A + +R+ K + G S I+ G EVH F+
Sbjct: 733 WYKATE----VRRNMK-------AQGVRKEPGCSWIEHGDEVHKFV 767
>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 728
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 304/637 (47%), Gaps = 74/637 (11%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G L++AR LFD+MP R SWN M+ Y+ G L L M+ S V+ N+++++
Sbjct: 53 KMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSA 112
Query: 149 VLRSSAEELELGVSKQLHGLIVKRG-------------FC------------------GN 177
VL + A + KQ+H L++K G FC GN
Sbjct: 113 VLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGN 172
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+L S ++ Y K +M DA MF+ + ++ V+W ++ Y +G E + F +R
Sbjct: 173 QVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMR 232
Query: 238 --EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++ P FT + C+ L G +HG+ IK + D+ + G++TE Y C +
Sbjct: 233 RSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAI 292
Query: 296 EDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
+DA+ + + + ++ S++ G GRI EA +F E+ E N +S+N M+ GY S
Sbjct: 293 DDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMS 352
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
++ K+ + + KM E N+
Sbjct: 353 GQFE----------KSKRLFE-----------------KMSPE------------NLTSL 373
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WET 473
N ++ +Y K G L A F + R+ VSWN++++GY G+ +EA+ + M+
Sbjct: 374 NTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSV 433
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
S+ TF L AC+ + S QG+ +H +I+ +++NV ALV+ Y+KC L A R
Sbjct: 434 DYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQR 493
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
F S +V ++I G+ ++ G EA+ +F M +GI P+ TF G+L AC H G
Sbjct: 494 SFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGL 553
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V L+ F SM+ YG+ P +EHY C++ L R G++KE E+F+ +MP + +
Sbjct: 554 VCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALL 613
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ +GE AA +L L+P F F + +N +
Sbjct: 614 NASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMY 650
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 204/416 (49%), Gaps = 10/416 (2%)
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
GNVI + + K + +AR +FD + N+ SWN ++ Y + G EA+ + M
Sbjct: 39 GNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFM 98
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
R + +F+ L AC+ S G Q+H +++K +E +V +L V C +
Sbjct: 99 HRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGI 158
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT-RS 354
+A + ++ + N + W+ +++GY + +A ++F +MP R+V++W +++GY R
Sbjct: 159 REAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGYAKRE 218
Query: 355 LLWKEALDFVFLMRKTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+ ALD MR++++ + ++ TL ++ VCA L ++ GK VHG + + +
Sbjct: 219 DGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDFDNSI 278
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
A+ + Y C + A+ + M + N+++ G +G+ EEA F E++ ET
Sbjct: 279 GGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYELR-ET 337
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P ++ ++ A E+ K++ N+ ++ VY+K L+ A++
Sbjct: 338 NP--VSYNLMIKGYAMSGQFEKSKRL----FEKMSPENLTSLNTMISVYSKNGELDEAVK 391
Query: 534 VF-KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+F K + + NSM+ G+ N + +EAL ++ M++ + TF + AC
Sbjct: 392 LFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRAC 447
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 167/365 (45%), Gaps = 47/365 (12%)
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+P N+IS ++ G++ EAR LF++MP R V SWN M++GY+ + EAL
Sbjct: 35 EPHVGNVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTL 94
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
V M ++ +++V+ +L+ CA +GK+VH + ++ Y V +ALL
Sbjct: 95 VSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVH 154
Query: 424 CGNLRSARIWFYQMSQR------------------------------RDKVSWNAVLTGY 453
C +R A + F ++ RD V+W +++GY
Sbjct: 155 CCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGY 214
Query: 454 ARRGQS-EEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
A+R E A+ F M+ E P++FT + ++ CA + L GK +H I+ +
Sbjct: 215 AKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDF 274
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKE---SSSLDVIICNSMILGFCHNERGREALEVFG 567
+ GA+ E Y C ++ A RV++ +SL+V NS+I G R EA VF
Sbjct: 275 DNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNV--ANSLIGGLVSKGRIEEAELVFY 332
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
++ + + ++++ ++ G + + + F+ M + L MI +Y +
Sbjct: 333 ELR----ETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPE-----NLTSLNTMISVYSKN 383
Query: 628 GYMKE 632
G + E
Sbjct: 384 GELDE 388
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 143/330 (43%), Gaps = 46/330 (13%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFL--LNRAIECYGKCG 91
L+ PVSY+L K + + E + F P L LN I Y K G
Sbjct: 334 LRETNPVSYNLMI---------KGYAMSGQFEKSKRLFEKMSPENLTSLNTMISVYSKNG 384
Query: 92 NLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
LD+A LFD+ ER+ SWN+M+ Y NG L L++ M V ++ T++ +
Sbjct: 385 ELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRSTFSVLF 444
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
R+ + + LH ++K F NV + ++LVD Y KC + +A+R F I + N
Sbjct: 445 RACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVA 504
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+W ++ Y G G EA+++F ML + I P TF L AC+ EG++I
Sbjct: 505 AWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRI---- 560
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
S+ Y +E +T +V SG ++EA
Sbjct: 561 -----------FHSMQRCYGVTPTIEH---------------YTCVVDLLGRSGHLKEAE 594
Query: 331 ELFNEMP-ERNVISWNAMLAGYTRSLLWKE 359
E +MP E + I W A+L S WK+
Sbjct: 595 EFIIKMPIEADGIIWGALL---NASWFWKD 621
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 290/613 (47%), Gaps = 36/613 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I G GN+D A +FD+M ERD SWN++ AY QNG + +F M
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T + +L + +HGL+VK GF V + ++L+ Y +A +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + K+ +SWN ++ ++ G +A+ + M+ TF +AL AC F
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC-FTPDF 360
Query: 261 YE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+E G +HG+++ + ++ +L MY K G +
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS----------------------- 397
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
E+R + +MP R+V++WNA++ GY +AL MR + +T+
Sbjct: 398 --------ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449
Query: 380 GLILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L+ C ++ + GK +H +I + S+ V N+L+ MY KCG+L S++ F +
Sbjct: 450 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 509
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGK 497
R + ++WNA+L A G EE + S+M+ + +F+F L+A A ++ LE+G+
Sbjct: 510 NR-NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H ++ +E + A ++Y+KC + +++ S + + N +I +
Sbjct: 569 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 628
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
E F M + GIKP H+TF +L AC H G V L ++D + +G+ P +EH
Sbjct: 629 YFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHC 688
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C+I L R G + E E F+++MP P + R + C+ +G G AA L++L P
Sbjct: 689 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEP 748
Query: 678 WAPFQFKITTNRF 690
+ +++N F
Sbjct: 749 EDDSVYVLSSNMF 761
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 148/594 (24%), Positives = 269/594 (45%), Gaps = 50/594 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + YG G + +R +F+EMP+R+ SW +++ Y+ G P ++++ M
Sbjct: 77 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG 136
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV N+ + + V+ S + + +Q+ G +VK G + +E+SL+ G +
Sbjct: 137 EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 196
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD + ++ +SWN I Y G+ +E+ +F M R + T + L
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G IHG+++K+ F+ V +L MY GR +A + Q +++ISW S+
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ + G RSL +AL + M + K ++
Sbjct: 317 MASFVNDG----------------------------RSL---DALGLLCSMISSGKSVNY 345
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
VT L C + G+ +HG + + N + NAL+ MY K G + +R Q
Sbjct: 346 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISS-LE 494
M RRD V+WNA++ GYA ++A+ +F M+ E S + T ++L+AC LE
Sbjct: 406 MP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+GK +H +++ +E + + +L+ +Y KC L + +F + ++I N+M+
Sbjct: 465 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 524
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGIL-----LACIHEGNVKLALQFFDSMRCKYG 609
H+ G E L++ M+ G+ D +F L LA + EG Q + K G
Sbjct: 525 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG------QQLHGLAVKLG 578
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGY 661
+ +Y + G E+ + V +P N ++P + ++GY
Sbjct: 579 FEHDSFIFNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 245/540 (45%), Gaps = 38/540 (7%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS---SAEELEL 159
MP R+ SWN M+ + G +E F M G+ + A+++ + S
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
GV Q+HG + K G +V + ++++ YG +++ +R++F+++ ++N VSW ++ Y
Sbjct: 61 GV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
G +E + ++ M E + + + + +C L G QI G ++K E
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V SL M G ++ A + DQ ER+ ISW SI + YA +G I E+ +F+
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS----- 233
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
LMR+ +++ T+ +L+V + K G+ +H
Sbjct: 234 --------------------------LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
G + + + S + V N LL MY G A + F QM +D +SWN+++ + G+S
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMASFVNDGRS 326
Query: 460 EEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
+A+ M + + TF + LAAC E+G+ +H V+ + N + AL
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL 386
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
V +Y K + + RV + DV+ N++I G+ +E +AL F M+ EG+ ++
Sbjct: 387 VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNY 446
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
IT +L AC+ G++ + + G +I +Y + G + +D N
Sbjct: 447 ITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN 506
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 195/432 (45%), Gaps = 34/432 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + Y G +A +F +MP +D SWN+++ ++ +G L L M
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 338
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG S N +T+ + L + + LHGL+V G N I+ ++LV YGK M++
Sbjct: 339 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+RR+ + ++ V+WN ++ Y + +A+ F M E + T + L AC
Sbjct: 399 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 458
Query: 257 LSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
E G +H I+ FE D+ V SL MY KCG L ++ L + D RNII+W
Sbjct: 459 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW-- 516
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
NAMLA +E L V MR +D
Sbjct: 517 -----------------------------NAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 547
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
Q + L+ A L+ ++ G+++HG + + + F+ NA DMY KCG + +
Sbjct: 548 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV-VKML 606
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
S R SWN +++ R G EE +F EM + +P TF +LL AC++ ++
Sbjct: 607 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666
Query: 495 QGKQIHCFVIRN 506
+G + + R+
Sbjct: 667 KGLAYYDMIARD 678
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 210/443 (47%), Gaps = 47/443 (10%)
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-EGMQ 265
+N VSWN ++ + G E + F KM I+P +F A+ + AC S + EG+Q
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG + K G L+++YV T+I+ Y + G
Sbjct: 64 VHGFVAKS---------GLLSDVYVS----------------------TAILHLYGVYGL 92
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ +R++F EMP+RNV+SW +++ GY+ +E +D MR ++ ++ L+++
Sbjct: 93 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C L + +G+++ G + ++ S + V N+L+ M GN+ A F QMS+ RD +S
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTIS 211
Query: 446 WNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN++ YA+ G EE+ FS M ++ + T TLL+ ++ + G+ IH V+
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ V L+ +Y A VFK+ + D+I NS++ F ++ R +AL
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY------E 618
+ M G +++TF L AC FF+ R +G++ +
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAAC-------FTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 619 CMIKLYCRYGYMKELEDFVNRMP 641
++ +Y + G M E + +MP
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMP 407
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+ S + V+Y + C + + R L +V + N + YGK G +
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS- 152
++R + +MP RD +WNA++G Y ++ P + L F M GVS+N IT +VL +
Sbjct: 397 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Query: 153 --SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+ LE G K LH IV GF + +++SL+ Y KC ++ ++ +F+ + N+N +
Sbjct: 457 LLPGDLLERG--KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
+WN ++ G+G+E + + KM + F+F+ L A + L+ EG Q+HG+
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
+K+ FE D + + +MY KCG + + +L R++ SW ++S G E
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 634
Query: 331 ELFNEMPERNV 341
F+EM E +
Sbjct: 635 ATFHEMLEMGI 645
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 129/319 (40%), Gaps = 50/319 (15%)
Query: 51 LCASSKAIV--EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
L A++K V E ++L V F+ N A + Y KCG + + + R
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 614
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWN ++ A ++G+ F +M G+ +T+ ++L + + HG
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS-----------HGG 663
Query: 169 IVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+V +G + + + L A C+ + D ++ R +G
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIEHCICVID------------------LLGR---SGRLA 702
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA KM ++P + + + L +C + G + + K++ E D V + S +
Sbjct: 703 EAETFISKM---PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS-S 758
Query: 287 EMYVKCGRLEDARGLLDQPDERNI-----ISWTSI---VSGYAISGRIR-EARELFNEMP 337
M+ GR ED + Q +NI SW + VS + I R + E++ ++
Sbjct: 759 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 818
Query: 338 E-RNVISWNAMLAGYTRSL 355
+ + +I + +A +++L
Sbjct: 819 DIKKLIKESGYVADTSQAL 837
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 284/603 (47%), Gaps = 41/603 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K G LD A +FD M RD SWN M+ + G + L F
Sbjct: 74 NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFE 133
Query: 141 ANQITYANVLRS--SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N T + + S +E G+ ++HG I++ GF +++SL+ Y M A
Sbjct: 134 PNVSTLVLAIHACRSLGAMEEGL--KMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAE 190
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFL 257
+FD++ ++ +SW+V++ Y+ G K A+ +F +M L+ T + L AC+
Sbjct: 191 ELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANT 250
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +HGV+I + D V S+ +MY KC E
Sbjct: 251 GDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHE--------------------- 289
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
A + FNEMP RN +SWN++++G R+ EAL + M K D+V
Sbjct: 290 ----------SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEV 339
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL +L C + K +H + R Y N FV N+L+D Y KC + A F ++
Sbjct: 340 TLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRL 399
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +D VSW+A++ G+ G+ +EA+ F EM Q + +P+ T +LL A + + L++
Sbjct: 400 -KTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRS 458
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K H IR V A++++Y KC + + + F + +++ +MI N
Sbjct: 459 KWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMN 518
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
R+AL + MK G+KP+ +T +L AC H G V+ L FF++M +G+ P LEH
Sbjct: 519 GLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEH 578
Query: 617 YECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
Y CM+ + R G + + + +MP + + CR +G + LG AA R+ E
Sbjct: 579 YSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLE 638
Query: 675 LNP 677
L P
Sbjct: 639 LEP 641
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 39/449 (8%)
Query: 52 CASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
C S A+ E K+ ++ F P V N + Y +++ A LFDEM ERD
Sbjct: 146 CRSLGAMEEGLKMHGYIIRSGFLDIPSV--QNSLLSMYAD-NDMERAEELFDEMCERDVI 202
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SW+ M+G Y Q G L+LFL+M +++ + + IT +VL++ A ++ + + +HG+
Sbjct: 203 SWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGV 262
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++ RG ++ + +S++D Y KC A + F+++ +N VSWN I+ + EA
Sbjct: 263 VICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEA 322
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F+ M + R T N L +C + P++ IH ++I+ +E ++ V+ SL +
Sbjct: 323 LSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDA 382
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KC +E A L D+ ++ +SW+++++G+ G+ EA LF E
Sbjct: 383 YSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE------------- 429
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
M + + + VT+ +L + +++K K HG R +
Sbjct: 430 ------------------MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLA 471
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ + V A+LDMY KCG + +R F Q+ + ++ VSW A++ G + +A+ SE
Sbjct: 472 AEVAVGTAILDMYAKCGEIGLSRKAFDQIPE-KNIVSWGAMIAACGMNGLARDALALLSE 530
Query: 469 MQWE-TRPSKFTFETLLAACANISSLEQG 496
M+ +P+ T ++L+AC++ +E+G
Sbjct: 531 MKLHGLKPNVVTTLSVLSACSHGGLVEEG 559
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 204/440 (46%), Gaps = 41/440 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA++ I R + ++ +F+ N I+ Y KC + + A F+EMP R+
Sbjct: 243 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 302
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN+++ + L LF M +G A+++T N+L+S ++ K +H
Sbjct: 303 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 362
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++++ G+ N + +SL+DAY KC ++ A ++FD ++ K+ VSW+ ++ + G E
Sbjct: 363 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 422
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +M + +P T + L A S + HG+ I+ + V ++ +
Sbjct: 423 AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILD 482
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVIS 343
MY KCG + +R DQ E+NI+SW ++++ ++G R+A L +EM + NV++
Sbjct: 483 MYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVT 542
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
++L+ + L +E L F +D HG
Sbjct: 543 TLSVLSACSHGGLVEEGLSF---FENMVQD-------------------------HGVEP 574
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVS-WNAVLTGYARRGQSE- 460
++ S ++DM + G L SA +M +R RD W A+L+ G S
Sbjct: 575 GLEHYS------CMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRL 628
Query: 461 EAMTSFSEMQWETRPSKFTF 480
A +F ++ E + S F
Sbjct: 629 GAGAAFRVLELEPQSSAGYF 648
>gi|15220977|ref|NP_173696.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145323986|ref|NP_001077582.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75316139|sp|Q4V389.1|PPR55_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g22830
gi|66792712|gb|AAY56458.1| At1g22830 [Arabidopsis thaliana]
gi|332192171|gb|AEE30292.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192172|gb|AEE30293.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 703
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 274/539 (50%), Gaps = 16/539 (2%)
Query: 149 VLRSSAEEL-------ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
VL SSA L E +QLH + G + +L LV Y ++ +A+ +
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTIT 141
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
++ + + + WNV++ Y+ +E+V ++ +M+ + IR FT+ + + AC+ L
Sbjct: 142 ENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +HG I + V +L MY + G+++ AR L D+ ER+ +SW +I++ Y
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 322 ISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
++ EA +L + M E ++++WN + G + + AL+ V MR I V
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNI-FVSNALLDMYRKCGNLRSARIWFY 435
+ L C+ + +K GK H + R+ +S +I V N+L+ MY +C +LR A I F
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ 381
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
Q+ + +WN++++G+A +SEE EM P+ T ++L A + +L+
Sbjct: 382 QV-EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQ 440
Query: 495 QGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
GK+ HC+++R Y+ ++ +LV++Y K + A RVF D + S+I G+
Sbjct: 441 HGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGY 500
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+G AL F M + GIKPDH+T +L AC H V+ F M +GI +
Sbjct: 501 GRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLR 560
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
LEHY CM+ LYCR GY+ + D + +P+ P+ M + C +G +GEWAA +L
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKL 619
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 240/544 (44%), Gaps = 81/544 (14%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S E V YS A L C V ++L ++ ++ L+ + + Y LD+
Sbjct: 78 SHEFVLYS-SASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDE 136
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A+ + + WN ++G+Y +N ++ ++ M G+ A++ TY +V+++ A
Sbjct: 137 AQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L+ + +HG I N+ + ++L+ Y + + ARR+FD + ++AVSWN I
Sbjct: 197 LLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAI 256
Query: 216 VRRY-----------------------------------LVAGNGKEAVVMFFKMLREDI 240
+ Y L AGN A+ M ++
Sbjct: 257 INCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNV 316
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGD-DVVLGSLTEMYVKCGRLEDA 298
R + N L ACS + + G H ++I+ F D D V SL MY +C L A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ Q + ++ +W SI+SG+A + R E L EM +L+G+
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM----------LLSGF------- 419
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNAL 417
+ +TL IL + A + ++ GKE H +I R Y + + N+L
Sbjct: 420 --------------HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+DMY K G + +A+ F M ++RDKV++ +++ GY R G+ E A+ F +M +P
Sbjct: 466 VDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 477 KFTFETLLAACANISSLEQG-----KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
T +L+AC++ + + +G K H F IR + + +V++Y + L+ A
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR----LRLEHYSCMVDLYCRAGYLDKA 580
Query: 532 IRVF 535
+F
Sbjct: 581 RDIF 584
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 198/499 (39%), Gaps = 78/499 (15%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
+ +S +++DE Y + + CA+ R + ++ +++ N I Y
Sbjct: 174 RMMSKGIRADEFT----YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY- 146
+ G +D AR LFD M ERD SWNA++ YT G +L M SGV A+ +T+
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 147 ----------------------------------ANVLRSSAEELELGVSKQLHGLIVKR 172
N L++ + L K H L+++
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 173 GFCGNVI--LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ I + +SL+ Y +C + A +F ++ + +WN I+ + +E
Sbjct: 350 CSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+ +ML P + T A+ L + + + G + H I++ + Y
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR-------------RQSYK 456
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
C +I W S+V YA SG I A+ +F+ M +R+ +++ +++ G
Sbjct: 457 DC-----------------LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y R + AL + M ++ D VT+ +L+ C S + +E H + ++
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC---SHSNLVREGHWLFTKMEHVFG 556
Query: 411 IFVS----NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
I + + ++D+Y + G L AR F+ + +L G + +
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAA 616
Query: 467 SEMQWETRPSKFTFETLLA 485
++ ET+P LLA
Sbjct: 617 DKLLLETKPEHLGHYMLLA 635
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 274/580 (47%), Gaps = 66/580 (11%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+QLH L++K G N +++SL++ Y K + DA+ +FD N +S N++V Y A
Sbjct: 289 RQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKA 348
Query: 223 GNGKEAVVMF------------------------------FKMLRED-IRPLNFTFANAL 251
G A +F FK +R D + P + T N +
Sbjct: 349 GQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVI 408
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+ACS IH + IK+ EG +V +L Y C + +AR L D+ E N++
Sbjct: 409 YACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLV 468
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
SW +++GYA +G + ARELF +P+++VISW M+ GY EAL M ++
Sbjct: 469 SWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSG 528
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR--- 428
++++ + +++ C L+ I G ++HG + + + F+ ++ Y CG +
Sbjct: 529 LALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLAC 588
Query: 429 ----------------------------SARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
AR F M +R D SW+ +++GYA+ QS
Sbjct: 589 LQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPER-DVFSWSTMISGYAQTDQSR 647
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
A+ F +M +P++ T ++ +A A + +L++G+ H ++ +N R AL+
Sbjct: 648 IALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALI 707
Query: 520 EVYTKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
++Y KC + A++ F + + V N++I G + L+VF M++ IKP+
Sbjct: 708 DMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPN 767
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
ITF G+L AC H G V+ + F M+ Y + P ++HY CM+ L R G ++E E+ +
Sbjct: 768 PITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMI 827
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
MP + + + CR +G +GE AA L L P
Sbjct: 828 RSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAP 867
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 265/534 (49%), Gaps = 51/534 (9%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y K G LD+AR LFD MP++ S+ M+ QN LE+F DM GV N +T
Sbjct: 345 YAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTL 404
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
NV+ + + E+ + +H + +K G V++ ++L+ AY C + +ARR+FD +
Sbjct: 405 VNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPE 464
Query: 207 KNAVSWNVIVRRYLVAG------------------------NG-------KEAVVMFFKM 235
N VSWNV++ Y AG +G EA+VM+ M
Sbjct: 465 VNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAM 524
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
LR + N + AC L++ +G Q+HG+++K F+ + + ++ Y CG +
Sbjct: 525 LRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMM 584
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ A + + ++ SW ++VSG+ + + +AR++F++MPER+V SW+ M++GY ++
Sbjct: 585 DLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTD 644
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+ AL+ M + ++VT+ + + A L +K G+ H +I N +
Sbjct: 645 QSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRA 704
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVS-WNAVLTGYARRGQSEEAMTSFSEMQ-WET 473
AL+DMY KCG++ SA +F Q+ + VS WNA++ G A G + + FS+MQ +
Sbjct: 705 ALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNI 764
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYA 531
+P+ TF +L+AC + +E G++I ++++ Y E ++ G +V++ + LE A
Sbjct: 765 KPNPITFIGVLSACCHAGLVEPGRRIF-RIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEA 823
Query: 532 IRVFKESSSLDVIICNSMILGFCHN-------ERGREALEVFGLMKKEGIKPDH 578
+ + I+ +L C ER E+L G+ P H
Sbjct: 824 EEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESL--------AGLAPSH 869
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 190/451 (42%), Gaps = 65/451 (14%)
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
A + SS +G Q+H +++K+ + + SL MY K G ++DA+ L D N IS
Sbjct: 278 ALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPIS 337
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+V GYA +G++ AR+LF+ MP++ +S+ M+ G ++ ++EAL+ MR
Sbjct: 338 CNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGV 397
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
+ +TL ++ C+ EI + +H + + VS L+ Y C + AR
Sbjct: 398 VPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARR 457
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE------MQWETRPSKFTFE----- 481
F +M + + VSWN +L GYA+ G + A F + W T +
Sbjct: 458 LFDRMPE-VNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHE 516
Query: 482 ---------------------TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
L++AC ++++ G Q+H V++ ++ + ++
Sbjct: 517 ALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIH 576
Query: 521 VYTKC-----CCLEYAI--------------------------RVFKESSSLDVIICNSM 549
Y C CL++ + ++F + DV ++M
Sbjct: 577 FYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTM 636
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I G+ ++ R ALE+F M GIKP+ +T + A G +K ++ C
Sbjct: 637 ISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEG-RWAHEYICNES 695
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
I +I +Y + G + F N++
Sbjct: 696 IPLNDNLRAALIDMYAKCGSINSALQFFNQI 726
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 47/323 (14%)
Query: 57 AIVEARKL-----ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
+ EAR+L E NLV++ N + Y K G +D AR LF+ +P++D SW
Sbjct: 451 GVGEARRLFDRMPEVNLVSW---------NVMLNGYAKAGLVDMARELFERVPDKDVISW 501
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
M+ Y L ++ M SG++ N+I N++ + +G QLHG++VK
Sbjct: 502 GTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVK 561
Query: 172 RGF-CGNVI----------------------------LES--SLVDAYGKCMVMTDARRM 200
+GF C N I LES +LV + K ++ AR++
Sbjct: 562 KGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKI 621
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FDD+ ++ SW+ ++ Y + A+ +F KM+ I+P T + A + L +
Sbjct: 622 FDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTL 681
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER--NIISWTSIVS 318
EG H I +D + +L +MY KCG + A +Q ++ ++ W +I+
Sbjct: 682 KEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIIC 741
Query: 319 GYAISGRIREARELFNEMPERNV 341
G A G ++F++M N+
Sbjct: 742 GLASHGHASMCLDVFSDMQRYNI 764
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 32/191 (16%)
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
L++A SS QG+Q+H V++ N + +L+ +Y K ++ A +F +L
Sbjct: 274 ALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTL 333
Query: 542 DVIICN-------------------------------SMILGFCHNERGREALEVFGLMK 570
+ I CN +MI+G NE REALEVF M+
Sbjct: 334 NPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMR 393
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+G+ P+ +T ++ AC H G + L + ++ K + + +++ YC +
Sbjct: 394 SDGVVPNDLTLVNVIYACSHFGEI-LNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGV 452
Query: 631 KELEDFVNRMP 641
E +RMP
Sbjct: 453 GEARRLFDRMP 463
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 263/502 (52%), Gaps = 38/502 (7%)
Query: 195 TDARRMFDDIQ-NKNAVSWNVIVRRYLVAGNGKE-AVVMFFKMLREDIRPLNFTFANALF 252
T A +F I + N ++N+++R + A+ +F +M+ + P NFTF
Sbjct: 65 TYASLLFSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFL 124
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+C+ L+ H ++ K+ D SL MY +CGR
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGR------------------ 166
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTT 371
+ AR++F+E+P R+++SWN+M+AGY ++ +EA++ F + R+
Sbjct: 167 -------------VAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDG 213
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D+++L +L C L ++++G+ V GF+ + N ++ +AL+ MY KCG+L SAR
Sbjct: 214 FEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSAR 273
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F M+ R D ++WNAV++GYA+ G ++EA++ F M+ + +K T +L+ACA I
Sbjct: 274 RIFDGMAAR-DVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATI 332
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
+L+ GKQI + + ++ ++ AL+++Y KC L A RVFKE + N+MI
Sbjct: 333 GALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMI 392
Query: 551 LGFCHNERGREALEVFGLMKKEG--IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+ + +EAL +F M EG +P+ ITF G+L AC+H G V + FD M +
Sbjct: 393 SALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLF 452
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
G++P++EHY CM+ L R G++ E D + +MP P L + CR +GE
Sbjct: 453 GLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERV 512
Query: 669 ARRLNELNPWAPFQFKITTNRF 690
R + E++P + I++ +
Sbjct: 513 IRMILEVDPSNSGNYIISSKIY 534
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 256/559 (45%), Gaps = 82/559 (14%)
Query: 48 LFQLCASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM-P 104
L + C+SSK + +++ + +V + +P LL++AI N A LF + P
Sbjct: 24 LAKQCSSSKTL---QQVHAQMVVKSSIHSPNNHLLSKAIHLK----NFTYASLLFSHIAP 76
Query: 105 ERDGGSWNAMLGAYTQ--NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ ++N M+ A T + +P L LF M +S N T+ S A L +
Sbjct: 77 HPNDYAFNIMIRALTTTWHHYP-LALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPA 135
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ H L+ K + SL+ Y +C + AR++FD+I ++ VSWN ++ Y A
Sbjct: 136 RAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKA 195
Query: 223 GNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +EAV +F +M R D P + + L AC L G + G +++ + +
Sbjct: 196 GCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYI 255
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY KCG L AR + D R++I+W +++SGYA +G EA LF+ M E V
Sbjct: 256 GSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCV 315
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+++TL +L+ CA + + +GK++ +
Sbjct: 316 TE-------------------------------NKITLTAVLSACATIGALDLGKQIDEY 344
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + +IFV+ AL+DMY KCG+L SA+ F +M Q +++ SWNA+++ A G+++E
Sbjct: 345 ASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQ-KNEASWNAMISALASHGKAKE 403
Query: 462 AMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
A++ F M E RP+ TF LL+AC + + +G ++ +++ G +
Sbjct: 404 ALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRL--------FDMMSTLFGLV 455
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
++ C ++ R E + L++K KPD
Sbjct: 456 PKIEHYSCMVDLL-------------------------ARAGHLYEAWDLIEKMPEKPDK 490
Query: 579 ITFHGILLACIHEGNVKLA 597
+T +L AC + NV +
Sbjct: 491 VTLGALLGACRSKKNVDIG 509
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 189/422 (44%), Gaps = 45/422 (10%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA+ + AR S + + I Y +CG + AR +FDE+P RD SW
Sbjct: 126 CANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSW 185
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
N+M+ Y + G +E+F +M G ++++ +VL + E +L + + + G +V
Sbjct: 186 NSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVV 245
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+RG N + S+L+ Y KC + ARR+FD + ++ ++WN ++ Y G EA+
Sbjct: 246 ERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAIS 305
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F M + + T L AC+ + + G QI + F+ D V +L +MY
Sbjct: 306 LFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYA 365
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER------NVISW 344
KCG L A+ + + ++N SW +++S A G+ +EA LF M + N I++
Sbjct: 366 KCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITF 425
Query: 345 NAMLAGYTRSLLWKEA------LDFVF---------------------------LMRKTT 371
+L+ + L E + +F L+ K
Sbjct: 426 VGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMP 485
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS--NIFVSNAL---LDMYRKCGN 426
+ D+VTLG +L C + +G+ V I D S+ N +S+ + L+M+
Sbjct: 486 EKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSAR 545
Query: 427 LR 428
+R
Sbjct: 546 MR 547
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 281/602 (46%), Gaps = 75/602 (12%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +++ +HG I+ GF + + L+D Y K + AR++FD+I + ++ +V
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 219 YLVAGN---------------------------------GKEAVVMFFKMLREDIRPLNF 245
Y +G+ G A+ +F KM E +P NF
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 246 TFANALFACSFLS-SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR----LEDARG 300
TFA+ L + ++ + +Q H +K V +L +Y KC L AR
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER-NVISWNAMLAGYTRSLLWKE 359
+ D+ E++ SWT++++GY +G EL M + ++++NAM++GY ++E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALL 418
AL+ V M + ++D+ T ++ CA +++GK+VH ++ R D+S + N+L+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF--DNSLV 327
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET----- 473
+Y KCG AR F +M +D VSWNA+L+GY G EA F EM+ +
Sbjct: 328 SLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 474 ---------------------------RPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
P + F + +CA + + G+Q H +++
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
++ ++ AL+ +Y KC +E A +VF+ LD + N++I + G EA++V+
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M K+GI+PD IT +L AC H G V ++FDSM Y I P +HY +I L CR
Sbjct: 507 EEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCR 566
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G + E + +PF PT + + CR +G LG AA +L L P + +
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLL 626
Query: 687 TN 688
+N
Sbjct: 627 SN 628
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 242/532 (45%), Gaps = 85/532 (15%)
Query: 45 YAHLFQLCASSK--AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
YA +LC + ++ AR + N++TF P +LNR I+ Y K L+ AR LFDE
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 103 MPE---------------------------------RDGGSWNAMLGAYTQNGFPGRTLE 129
+ E RD +NAM+ ++ N +
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 130 LFLDMNHSGVSANQITYANVLRS---SAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
LF M H G + T+A+VL A++ + V Q H +K G + ++LV
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV--QFHAAALKSGAGYITSVSNALVS 192
Query: 187 AYGKCM----VMTDARRMFDDIQNKNAVSWNVIVRRY---------------------LV 221
Y KC ++ AR++FD+I K+ SW ++ Y LV
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 222 AGNG-----------KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
A N +EA+ M +M+ I FT+ + + AC+ G Q+H +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 271 IK---IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
++ F D+ SL +Y KCG+ ++AR + ++ ++++SW +++SGY SG I
Sbjct: 313 LRREDFSFHFDN----SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
EA+ +F EM E+N++SW M++G + +E L M++ + + CA
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
L G++ H + + + S++ NAL+ MY KCG + AR F M D VSWN
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWN 487
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
A++ + G EA+ + EM + RP + T T+L AC++ ++QG++
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 182/451 (40%), Gaps = 106/451 (23%)
Query: 81 NRAIECYGKCGN----LDDARGLFDEMPERDGGSW------------------------- 111
N + Y KC + L AR +FDE+ E+D SW
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 112 -------NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
NAM+ Y GF LE+ M SG+ ++ TY +V+R+ A L + KQ
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 165 LHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H +++R F + ++SLV Y KC +AR +F+ + K+ VSWN ++ Y+ +G
Sbjct: 308 VHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 224 N-------------------------------GKEAVVMFFKMLREDIRPLNFTFANALF 252
+ G+E + +F M RE P ++ F+ A+
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
+C+ L + G Q H ++KI F+ +L MY KCG +E+A
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEA-------------- 471
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
R++F MP + +SWNA++A + EA+D M K
Sbjct: 472 -----------------RQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI 514
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHG---FIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
D++TL +L C+ + G++ ++R ++ + L+D+ + G
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LIDLLCRSGKFSD 572
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
A + + W A+L+G G E
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 41/299 (13%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY---------------------- 118
N + Y KCG D+AR +F++MP +D SWNA+L Y
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 119 ---------TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+NGF L+LF M G ++ ++S A +Q H +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+K GF ++ ++L+ Y KC V+ +AR++F + ++VSWN ++ G+G EAV
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG---VIIKIDFEGDDVVLGSLT 286
++ +ML++ IRP T L ACS +G + + +I D L
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH--YARLI 561
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGR----IREARELFNEMPERN 340
++ + G+ DA +++ P + W +++SG + G I A +LF +PE +
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 129/331 (38%), Gaps = 74/331 (22%)
Query: 383 LNVCAGL--SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ- 439
L +C L + +++ + VHG I + + N L+D+Y K L AR F ++S+
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 440 -------------------------------RRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
RD V +NA++TG++ A+ F +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 469 MQWET-RPSKFTFETLLAACANISSLE-QGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ E +P FTF ++LA A ++ E Q Q H +++ ALV VY+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 527 C----LEYAIRVFKE--------------------------------SSSLDVIICNSMI 550
L A +VF E ++ ++ N+MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
G+ + +EALE+ M GI+ D T+ ++ AC G ++L Q + +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ ++ LY + G E +MP
Sbjct: 319 SFHFDN--SLVSLYYKCGKFDEARAIFEKMP 347
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/674 (26%), Positives = 316/674 (46%), Gaps = 57/674 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDA 96
+P +Y+ A L + A + + +++ +++ F Y V + N + Y KCG+
Sbjct: 94 KPDNYAFPA-LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-- 154
+FD + ER+ SWN+++ + LE F M V + T +V+ + +
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 155 ---EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
E L +G KQ+H +++G + I+ ++LV YGK + ++ + ++ V+
Sbjct: 213 PMPEGLMMG--KQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ EA+ +M+ E + P FT ++ L ACS L G ++H +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 272 KIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
K ++ +GS L +MY C ++ R + D +R I W ++++GY+ + +EA
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LF M E +LA T T+ ++ C
Sbjct: 390 LLFIGMEES-----AGLLANST-------------------------TMAGVVPACVRSG 419
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ +HGF+ + + FV N L+DMY + G + A F +M + RD V+WN ++
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMI 478
Query: 451 TGYARRGQSEEAMTSFSEMQ------------WETRPSKFTFETLLAACANISSLEQGKQ 498
TGY E+A+ +MQ +P+ T T+L +CA +S+L +GK+
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH + I+N +V ALV++Y KC CL+ + +VF + +VI N +I+ + +
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EA+++ +M +G+KP+ +TF + AC H G V L+ F M+ YG+ P +HY
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 619 CMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
C++ L R G +KE +N MP FN + R + +GE AA+ L +L
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFN-KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
Query: 677 PWAPFQFKITTNRF 690
P + + N +
Sbjct: 718 PNVASHYVLLANIY 731
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 234/493 (47%), Gaps = 45/493 (9%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W +L + ++ + ++DM G+ + + +L++ A+ ++ + KQ+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 171 KRGF-CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K G+ +V + ++LV+ Y KC ++FD I +N VSWN ++ + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F ML E++ P +FT + + ACS L P EG+ +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMP-EGLMM----------------------- 220
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
G+ A GL + E N ++V+ Y G++ ++ L R++++WN +L+
Sbjct: 221 ---GKQVHAYGL--RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYS 408
++ EAL+++ M + D+ T+ +L C+ L ++ GKE+H + +N
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
N FV +AL+DMY C + S R F M R+ + WNA++ GY++ +EA+ F
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIG 394
Query: 469 MQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ + T ++ AC + + + IH FV++ + + + L+++Y++
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK-----------KEGIK 575
++ A+R+F + D++ N+MI G+ +E +AL + M+ + +K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 576 PDHITFHGILLAC 588
P+ IT IL +C
Sbjct: 515 PNSITLMTILPSC 527
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 180/395 (45%), Gaps = 40/395 (10%)
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
Q+++ W ++R + + +EAV+ + M+ I+P N+ F L A + L G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 265 QIHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QIH + K + D V V +L +Y KCG + D+ ERN +SW S++S
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ A E F M + NV + TL ++
Sbjct: 178 EKWEMALEAFRCMLDENV-------------------------------EPSSFTLVSVV 206
Query: 384 NVCAGL---SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
C+ L + MGK+VH + R N F+ N L+ MY K G L S+++
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG- 264
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
RD V+WN VL+ + Q EA+ EM E P +FT ++L AC+++ L GK++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 500 HCFVIRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H + ++N + N ALV++Y C + RVF + + N+MI G+ NE
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 559 GREALEVF-GLMKKEGIKPDHITFHGILLACIHEG 592
+EAL +F G+ + G+ + T G++ AC+ G
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 34/345 (9%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH- 136
F+ N ++ Y + G +D A +F +M +RD +WN M+ Y + L L M +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 137 -----SGVS-----ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
G S N IT +L S A L K++H +K +V + S+LVD
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + +R++FD I KN ++WNVI+ Y + GNG+EA+ + M+ + ++P T
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLD- 303
F + ACS EG++I ++K D+ E + ++ + GR+++A L++
Sbjct: 621 FISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 304 QPDERNII-SWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLLW 357
P + N +W+S++ I + A+ L P NV S +LA Y+ + LW
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLW 737
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+A + +R+ K+ + G S I+ G EVH F+
Sbjct: 738 DKATE----VRRNMKEQG-------VRKEPGCSWIEHGDEVHKFV 771
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/674 (26%), Positives = 316/674 (46%), Gaps = 57/674 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDA 96
+P +Y+ A L + A + + +++ +++ F Y V + N + Y KCG+
Sbjct: 94 KPDNYAFPA-LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-- 154
+FD + ER+ SWN+++ + LE F M V + T +V+ + +
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 155 ---EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
E L +G KQ+H +++G + I+ ++LV YGK + ++ + ++ V+
Sbjct: 213 PMPEGLMMG--KQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ EA+ +M+ E + P FT ++ L ACS L G ++H +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 272 KIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
K ++ +GS L +MY C ++ R + D +R I W ++++GY+ + +EA
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LF M E +LA T T+ ++ C
Sbjct: 390 LLFIGMEES-----AGLLANST-------------------------TMAGVVPACVRSG 419
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ +HGF+ + + FV N L+DMY + G + A F +M + RD V+WN ++
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMI 478
Query: 451 TGYARRGQSEEAMTSFSEMQ------------WETRPSKFTFETLLAACANISSLEQGKQ 498
TGY E+A+ +MQ +P+ T T+L +CA +S+L +GK+
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH + I+N +V ALV++Y KC CL+ + +VF + +VI N +I+ + +
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EA+++ +M +G+KP+ +TF + AC H G V L+ F M+ YG+ P +HY
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 619 CMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
C++ L R G +KE +N MP FN + R + +GE AA+ L +L
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFN-KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
Query: 677 PWAPFQFKITTNRF 690
P + + N +
Sbjct: 718 PNVASHYVLLANIY 731
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 234/493 (47%), Gaps = 45/493 (9%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
W +L + ++ + ++DM G+ + + +L++ A+ ++ + KQ+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 171 KRGF-CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
K G+ +V + ++LV+ Y KC ++FD I +N VSWN ++ + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F ML E++ P +FT + + ACS L P EG+ +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMP-EGLMM----------------------- 220
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
G+ A GL + E N ++V+ Y G++ ++ L R++++WN +L+
Sbjct: 221 ---GKQVHAYGL--RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYS 408
++ EAL+++ M + D+ T+ +L C+ L ++ GKE+H + +N
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
N FV +AL+DMY C + S R F M R+ + WNA++ GY++ +EA+ F
Sbjct: 336 ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIG 394
Query: 469 MQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ + T ++ AC + + + IH FV++ + + + L+++Y++
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK-----------KEGIK 575
++ A+R+F + D++ N+MI G+ +E +AL + M+ + +K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 576 PDHITFHGILLAC 588
P+ IT IL +C
Sbjct: 515 PNSITLMTILPSC 527
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 180/395 (45%), Gaps = 40/395 (10%)
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
Q+++ W ++R + + +EAV+ + M+ I+P N+ F L A + L G
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 265 QIHGVIIKIDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QIH + K + D V V +L +Y KCG + D+ ERN +SW S++S
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ A E F M + NV + TL ++
Sbjct: 178 EKWEMALEAFRCMLDENV-------------------------------EPSSFTLVSVV 206
Query: 384 NVCAGL---SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
C+ L + MGK+VH + R N F+ N L+ MY K G L S+++
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG- 264
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
RD V+WN VL+ + Q EA+ EM E P +FT ++L AC+++ L GK++
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 500 HCFVIRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H + ++N + N ALV++Y C + RVF + + N+MI G+ NE
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 559 GREALEVF-GLMKKEGIKPDHITFHGILLACIHEG 592
+EAL +F G+ + G+ + T G++ AC+ G
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 34/345 (9%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH- 136
F+ N ++ Y + G +D A +F +M +RD +WN M+ Y + L L M +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 137 -----SGVS-----ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
G S N IT +L S A L K++H +K +V + S+LVD
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + +R++FD I KN ++WNVI+ Y + GNG+EA+ + M+ + ++P T
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLD- 303
F + ACS EG++I ++K D+ E + ++ + GR+++A L++
Sbjct: 621 FISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 304 QPDERNII-SWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLLW 357
P + N +W+S++ I + A+ L P NV S +LA Y+ + LW
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLW 737
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+A + +R+ K+ + G S I+ G EVH F+
Sbjct: 738 DKATE----VRRNMKEQG-------VRKEPGCSWIEHGDEVHKFV 771
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 164/614 (26%), Positives = 292/614 (47%), Gaps = 66/614 (10%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+N+++ Y +G + LFL M +SG+S ++ T+ L + A+ G Q+HGLIV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
K G+ ++ +++SLV Y +C + AR++FD++ +N VSW ++ Y K+AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 231 MFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+FF+M+R E++ P + T + AC+ L G +++ I E +D+++ +L +MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
+KC ++ A+ L D+ N+ ++ S Y G REA +FN
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN--------------- 326
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
LM + D++++ ++ C+ L I GK HG++ RN + S
Sbjct: 327 ----------------LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ NAL+DMY KC +A F +MS + V+WN+++ GY G+ + A +F M
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 470 ------QWETRPSKF---------------------------TFETLLAACANISSLEQG 496
W T S T ++ +AC ++ +L+
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K I+ ++ +N +++V LV+++++C E A+ +F ++ DV + I
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
A+E+F M ++G+KPD + F G L AC H G V+ + F SM +G+ P+ H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ L R G ++E + MP P + + CR G + +AA ++ L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 677 PWAPFQFKITTNRF 690
P + + +N +
Sbjct: 670 PERTGSYVLLSNVY 683
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 280/564 (49%), Gaps = 41/564 (7%)
Query: 40 VSYSLYAHLFQL--CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+S Y F L CA S+A ++ +V +F+ N + Y +CG LD AR
Sbjct: 130 ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSAR 189
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEE 156
+FDEM ER+ SW +M+ Y + F ++LF M V+ N +T V+ + A+
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+L ++++ I G N ++ S+LVD Y KC + A+R+FD+ N N +
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y+ G +EA+ +F M+ +RP + +A+ +CS L + G HG +++ FE
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + +L +MY+KC R + A + D+ + +++W SIV+GY +G + A E F M
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 337 PERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
PE+N++SWN +++G + L++EA++ F + + + D VT+ I + C L + +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K ++ +I +N ++ + L+DM+ +CG+ SA F ++ RD +W A + A
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMAM 548
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVV 513
G +E A+ F +M + +P F L AC++ ++QGK+I +++ + V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
G +V++ + LE A++ L++
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQ----------------------------------LIEDMP 634
Query: 574 IKPDHITFHGILLACIHEGNVKLA 597
++P+ + ++ +L AC +GNV++A
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMA 658
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 227/455 (49%), Gaps = 44/455 (9%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD---AYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRR 218
K H + K+G +V + LV G ++ A+ +F++ ++ +N ++R
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y +G EA+++F +M+ I P +TF L AC+ + G+QIHG+I+K+ + D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL Y +CG L+ AR + D+ ERN++SWTS++ GYA
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA----------------- 211
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLM-RKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R K+A+D F M R + VT+ +++ CA L +++ G++
Sbjct: 212 --------------RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V+ FI + N + +AL+DMY KC + A+ F + + NA+ + Y R+G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQG 316
Query: 458 QSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCR 515
+ EA+ F+ M RP + + + +++C+ + ++ GK H +V+RN +E + +C
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC- 375
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC + A R+F S+ V+ NS++ G+ N A E F M ++ I
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI- 434
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
++++ I+ + + A++ F SM+ + G+
Sbjct: 435 ---VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
>gi|51970930|dbj|BAD44157.1| hypothetical protein [Arabidopsis thaliana]
Length = 703
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 274/539 (50%), Gaps = 16/539 (2%)
Query: 149 VLRSSAEEL-------ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
VL SSA L E +QLH + G + +L LV Y ++ +A+ +
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTIT 141
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
++ + + + WNV++ Y+ +E+V ++ +M+ + IR FT+ + + AC+ L
Sbjct: 142 ENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G +HG I + V +L MY + G+++ AR L D+ ER+ +SW +I++ Y
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 322 ISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
++ EA +L + M E ++++WN + G + + AL+ V MR I V
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNI-FVSNALLDMYRKCGNLRSARIWFY 435
+ L C+ + +K GK H + R+ +S +I V N+L+ MY +C +LR A I F
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ 381
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
Q+ + +WN++++G+A +SEE EM P+ T ++L A + +L+
Sbjct: 382 QV-EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQ 440
Query: 495 QGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
GK+ HC+++R Y+ ++ +LV++Y K + A RVF D + S+I G+
Sbjct: 441 HGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGY 500
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+G AL F M + GIKPDH+T +L AC H V+ F M +GI +
Sbjct: 501 GRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLR 560
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
LEHY CM+ LYCR GY+ + D + +P+ P+ M + C +G +GEWAA +L
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKL 619
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 240/544 (44%), Gaps = 81/544 (14%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
S E V YS A L C V ++L ++ ++ L+ + + Y LD+
Sbjct: 78 SHEFVLYS-SASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDE 136
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A+ + + WN ++G+Y +N ++ ++ M G+ A++ TY +V+++ A
Sbjct: 137 AQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAA 196
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L+ + +HG I N+ + ++L+ Y + + ARR+FD + ++AVSWN I
Sbjct: 197 LLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAI 256
Query: 216 VRRY-----------------------------------LVAGNGKEAVVMFFKMLREDI 240
+ Y L AGN A+ M ++
Sbjct: 257 INCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNV 316
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGD-DVVLGSLTEMYVKCGRLEDA 298
R + N L ACS + + G H ++I+ F D D V SL MY +C L A
Sbjct: 317 RIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
+ Q + ++ +W SI+SG+A + R E L EM +L+G+
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM----------LLSGF------- 419
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNAL 417
+ +TL IL + A + ++ GKE H +I R Y + + N+L
Sbjct: 420 --------------HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+DMY K G + +A+ F M ++RDKV++ +++ GY R G+ E A+ F +M +P
Sbjct: 466 VDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 477 KFTFETLLAACANISSLEQG-----KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
T +L+AC++ + + +G K H F IR + + +V++Y + L+ A
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR----LRLEHYSCMVDLYCRAGYLDKA 580
Query: 532 IRVF 535
+F
Sbjct: 581 RDIF 584
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 198/499 (39%), Gaps = 78/499 (15%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
+ +S +++DE Y + + CA+ R + ++ +++ N I Y
Sbjct: 174 RMMSKGIRADEFT----YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY- 146
+ G +D AR LFD M ERD SWNA++ YT G +L M SGV A+ +T+
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 147 ----------------------------------ANVLRSSAEELELGVSKQLHGLIVKR 172
N L++ + L K H L+++
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 173 GFCGNVI--LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ I + +SL+ Y +C + A +F ++ + +WN I+ + +E
Sbjct: 350 CSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+ +ML P + T A+ L + + + G + H I++ + Y
Sbjct: 410 LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILR-------------RQSYK 456
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
C +I W S+V YA SG I A+ +F+ M +R+ +++ +++ G
Sbjct: 457 DC-----------------LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
Y R + AL + M ++ D VT+ +L+ C S + +E H + ++
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC---SHSNLVREGHWLFTKMEHVFG 556
Query: 411 IFVS----NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
I + + ++D+Y + G L AR F+ + +L G + +
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAA 616
Query: 467 SEMQWETRPSKFTFETLLA 485
++ ET+P LLA
Sbjct: 617 DKLLLETKPEHLGHYMLLA 635
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 264/534 (49%), Gaps = 67/534 (12%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
YGKC + +AR++FD I+N++AVSW ++ Y G EA+ ++ +M + I+P + TF
Sbjct: 2 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+AL AC+ L+ +G IH I+ + E D V +L MY +CG
Sbjct: 62 TSALLACTKLA---DGKAIHARIVSSNME-SDFVGSALINMYARCGD------------- 104
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+ AR+ F ++ ++V+ W +++ Y ++ ++EALD M
Sbjct: 105 ------------------VSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRM 146
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH------GF----IHR------------- 404
D VT L CA L +K GK +H GF +H
Sbjct: 147 DHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGELD 206
Query: 405 ------NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
N +SN+ V NAL+ MY KCG+L A+ F + S R+D VSWNA++ YA+ G
Sbjct: 207 AARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAF-EASGRKDLVSWNAMIGAYAQHGL 265
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYEINVVCRG 516
EA+ + M + P + T + L+ACA SL+ G++IH V++N ++ +++ +
Sbjct: 266 GREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQT 325
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
ALV +Y +C LE A +F++ DV+ +M + + L+++ M GI+P
Sbjct: 326 ALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRP 385
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+ ITF IL+ C H G + ++ F M+ ++ ++P EH+ CM+ L R G +++ E
Sbjct: 386 NEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEAL 445
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V MP+ P + C+ + A + AARR+ EL+P + + ++ F
Sbjct: 446 VESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIF 499
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 234/419 (55%), Gaps = 11/419 (2%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
YGKCG++++AR +FD + RD SW +M+ +Y NGF L+L+ M+ G+ + IT+
Sbjct: 2 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+ L + +L K +H IV + + S+L++ Y +C ++ AR+ F+ IQN
Sbjct: 62 TSALLACT---KLADGKAIHARIVSSNMESDFV-GSALINMYARCGDVSSARQAFEKIQN 117
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ V W ++ Y+ G+ +EA+ ++ +M E + T+ AL AC+ L + EG I
Sbjct: 118 KHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAI 177
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H + + F+ VV +L MY KCG L+ AR + ++ N+ ++V+ YA G +
Sbjct: 178 HLRVSECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRL-ASNVAVQNALVTMYAKCGSL 235
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
A+ F ++++SWNAM+ Y + L +EALD M D+VT+ L+ C
Sbjct: 236 ELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSAC 295
Query: 387 AGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
A +++G+E+H + +N + S++ V AL++MY +CG L +AR F M Q RD +S
Sbjct: 296 AISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQ-RDVLS 354
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
W A+ + YA++G +++ + + EM RP++ TF ++L C++ L +G + CF+
Sbjct: 355 WTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARG--VECFL 411
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 66/383 (17%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG +E+AR + D R+ +SWTS++S YA +G EA +L+ +M +
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGI------ 54
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
D +T L C L++ GK +H I ++
Sbjct: 55 -------------------------QPDSITFTSALLACTKLAD---GKAIHARIVSSNM 86
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
S+ FV +AL++MY +CG++ SAR F ++ Q + V W +++T Y + G EA+ +
Sbjct: 87 ESD-FVGSALINMYARCGDVSSARQAFEKI-QNKHVVCWTSLMTAYVQTGHYREALDLYG 144
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIR-----------------NCYE 509
M E T+ T L ACA++ +L++GK IH V C E
Sbjct: 145 RMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGE 204
Query: 510 I------------NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+ NV + ALV +Y KC LE A F+ S D++ N+MI + +
Sbjct: 205 LDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHG 264
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
GREAL+++ M +G+ PD +T L AC G+++L + + L
Sbjct: 265 LGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQ 324
Query: 618 ECMIKLYCRYGYMKELEDFVNRM 640
++ +Y R G ++ M
Sbjct: 325 TALVNMYGRCGRLETARSMFEDM 347
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 208/477 (43%), Gaps = 76/477 (15%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A KAI AR + SN+ F+ + I Y +CG++ AR F+++ + W
Sbjct: 72 ADGKAI-HARIVSSNM------ESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWT 124
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+++ AY Q G L+L+ M+H GV A+ +TY L + A L K +H + +
Sbjct: 125 SLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSEC 184
Query: 173 GF---------------CG--------------NVILESSLVDAYGKCMVMTDARRMFDD 203
GF CG NV ++++LV Y KC + A+ F+
Sbjct: 185 GFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEA 244
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
K+ VSWN ++ Y G G+EA+ ++ M + + P T A++L AC+ S G
Sbjct: 245 SGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLG 304
Query: 264 MQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
+IH ++K F+ +V +L MY +CGRLE AR + + +R+++SWT++ S YA
Sbjct: 305 REIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQ 364
Query: 323 SGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G + +L+ EM N I++ ++L G + + L ++ FL ++ ++ +
Sbjct: 365 QGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVE-CFLEMQSEHEVVPIR 423
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ ++D+ + G LR A M
Sbjct: 424 EHFL---------------------------------CMVDLLGRSGRLRDAEALVESMP 450
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQ 495
+ D V+W VL ++ A + ++ E P + +LL++ + L Q
Sbjct: 451 YQPDSVAWLTVLGSCKTHSDADTAKRAARRVK-ELDPENTSLYSLLSSIFTAAGLPQ 506
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 176/350 (50%), Gaps = 23/350 (6%)
Query: 33 HLKSDEPVSYSLYAH--LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC 90
HL+ E SL H L + A + AR + + L + V + N + Y KC
Sbjct: 178 HLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLAS-----NVAVQNALVTMYAKC 232
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G+L+ A+ F+ +D SWNAM+GAY Q+G L+L+ M GV +++T A+ L
Sbjct: 233 GSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSL 292
Query: 151 RSSAEELELGVSKQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ A L + +++H ++K + F +++++++LV+ YG+C + AR MF+D+ ++
Sbjct: 293 SACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDV 352
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+SW + Y G+ + + ++ +M+ IRP TF + L CS + G+ GV
Sbjct: 353 LSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCS-----HAGLLARGV 407
Query: 270 IIKIDFEGDDVVLG------SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG--- 319
++ + + V+ + ++ + GRL DA L++ P + + ++W +++
Sbjct: 408 ECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKT 467
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++ + + A E+ N ++ + + +T + L +EAL+ M++
Sbjct: 468 HSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKE 517
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 280/578 (48%), Gaps = 34/578 (5%)
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
++ + G N L + +++G E F +M+ +GVS + +Y + + E L
Sbjct: 40 KISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSH 99
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+ LH + +V+L++ ++ Y +C + DA ++FD++ + NAVS ++ Y
Sbjct: 100 GRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAE 159
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +AV +F +ML +P + + L + + G QIH +I+ + +
Sbjct: 160 QGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASI 219
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ MYVKCG L A+ + DQ + ++WT ++ GY +GR R+A +LF ++ V
Sbjct: 220 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGV 279
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
W++ FVF ++L CA L E++ GK++H
Sbjct: 280 -EWDS----------------FVF--------------SVVLKACASLEELRFGKQIHAC 308
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + + V L+D Y KC + SA F ++ + D VSW+A+++GY + Q EE
Sbjct: 309 VAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQMSQFEE 367
Query: 462 AMTSFSEMQWETRP--SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
A+ +F ++ + + FT+ ++ AC+ ++ G Q+H I+ + AL+
Sbjct: 368 AVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALI 427
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y+KC CL+ A VF+ + D++ + I G + EAL +F M G+KP+ +
Sbjct: 428 TMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 487
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF +L AC H G V+ + D+M KY + P ++HY+CMI +Y R G + E F+
Sbjct: 488 TFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKN 547
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
MPF P + C + LG+ A L +L+P
Sbjct: 548 MPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDP 585
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 238/502 (47%), Gaps = 37/502 (7%)
Query: 40 VSYSLYAH--LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
VS SLY++ LF+ C +++ R L + + P V L N ++ Y +CG+L+DA
Sbjct: 77 VSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDAD 136
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFDEM + + S M+ AY + G + + LF M SG Y +L+S
Sbjct: 137 KLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPR 196
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + +Q+H +++ G C N +E+ +V+ Y KC + A+R+FD + K V+W ++
Sbjct: 197 ALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMV 256
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y AG ++A+ +F ++ E + +F F+ L AC+ L G QIH + K+ E
Sbjct: 257 GYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLEC 316
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V L + Y+KC E A + E N +SW++I+SGY + EA + F +
Sbjct: 317 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 376
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+N + N+ T I C+ L++ +G +
Sbjct: 377 SKNAVVLNSF------------------------------TYTSIFQACSVLADCNIGGQ 406
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VH + + + +AL+ MY KCG L A F M D V+W A ++G+A G
Sbjct: 407 VHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDN-PDIVAWTAFISGHAYYG 465
Query: 458 QSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVC 514
+ EA+ F +M +P+ TF +L AC++ +EQGK ++R Y + +
Sbjct: 466 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRK-YNVAPTIDH 524
Query: 515 RGALVEVYTKCCCLEYAIRVFK 536
++++Y + L+ A+R K
Sbjct: 525 YDCMIDIYARSGLLDEALRFMK 546
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 188/418 (44%), Gaps = 34/418 (8%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+P S S+Y L + + +A+ R++ ++++ + + Y KCG L A
Sbjct: 178 DKPPS-SMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGA 236
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+ +FD+M + +W ++ YTQ G L+LF+D+ GV + ++ VL++ A
Sbjct: 237 KRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASL 296
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
EL KQ+H + K G V + + LVD Y KC A R F +I+ N VSW+ I+
Sbjct: 297 EELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 356
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
Y +EAV F + ++ LN FT+ + ACS L+ G Q+H IK
Sbjct: 357 SGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 416
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
G +L MY KCG L+DA + + D +I++WT+ +SG+A G EA LF +
Sbjct: 417 IGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 476
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M + + VT +L C+ ++ G
Sbjct: 477 MVSCGM-------------------------------KPNSVTFIAVLTACSHAGLVEQG 505
Query: 396 KE-VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
K + + + + + I + ++D+Y + G L A + M D +SW L+G
Sbjct: 506 KHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSG 563
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 158/336 (47%), Gaps = 14/336 (4%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+++ + + CAS + + +++ + + V + ++ Y KC + + A F E+
Sbjct: 285 VFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEI 344
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVS 162
E + SW+A++ Y Q ++ F + + + V N TY ++ ++ + + +
Sbjct: 345 REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIG 404
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q+H +KR G+ ES+L+ Y KC + DA +F+ + N + V+W + +
Sbjct: 405 GQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYY 464
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVV 281
GN EA+ +F KM+ ++P + TF L ACS +G + ++ K +
Sbjct: 465 GNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDH 524
Query: 282 LGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAIS-----GRI--REARELF 333
+ ++Y + G L++A R + + P E + +SW +SG G+I E R+L
Sbjct: 525 YDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLD 584
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
E V+ +N YT + W+EA + + LM +
Sbjct: 585 PEDTAGYVLPFNL----YTWAGKWEEAAEVMKLMNE 616
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 164/614 (26%), Positives = 292/614 (47%), Gaps = 66/614 (10%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+N+++ Y +G + LFL M +SG+S ++ T+ L + A+ G Q+HGLIV
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
K G+ ++ +++SLV Y +C + AR++FD++ +N VSW ++ Y K+AV
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 231 MFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+FF+M+R E++ P + T + AC+ L G +++ I E +D+++ +L +MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
+KC ++ A+ L D+ N+ ++ S Y G REA +FN
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN--------------- 326
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
LM + D++++ ++ C+ L I GK HG++ RN + S
Sbjct: 327 ----------------LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ NAL+DMY KC +A F +MS + V+WN+++ GY G+ + A +F M
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 470 ------QWETRPSKF---------------------------TFETLLAACANISSLEQG 496
W T S T ++ +AC ++ +L+
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K I+ ++ +N +++V LV+++++C E A+ +F ++ DV + I
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
A+E+F M ++G+KPD + F G L AC H G V+ + F SM +G+ P+ H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y CM+ L R G ++E + MP P + + CR G + +AA ++ L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 677 PWAPFQFKITTNRF 690
P + + +N +
Sbjct: 670 PERTGSYVLLSNVY 683
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 275/550 (50%), Gaps = 39/550 (7%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA S+A ++ +V +F+ N + Y +CG LD AR +FDEM ER+ SW
Sbjct: 144 CAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSW 203
Query: 112 NAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+M+ Y + F ++LF M V+ N +T V+ + A+ +L ++++ I
Sbjct: 204 TSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR 263
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
G N ++ S+LVD Y KC + A+R+FD+ N N + Y+ G +EA+
Sbjct: 264 NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALG 323
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+F M+ +RP + +A+ +CS L + G HG +++ FE D + +L +MY+
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYM 383
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KC R + A + D+ + +++W SIV+GY +G + A E F MPE+N++SWN +++G
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 351 YTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
+ L++EA++ F + + + D VT+ I + C L + + K ++ +I +N
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++ + L+DM+ +CG+ SA F ++ RD +W A + A G +E A+ F +M
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 470 -QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCC 527
+ +P F L AC++ ++QGK+I +++ + V G +V++ +
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
LE A++ L++ ++P+ + ++ +L A
Sbjct: 623 LEEAVQ----------------------------------LIEDMPMEPNDVIWNSLLAA 648
Query: 588 CIHEGNVKLA 597
C +GNV++A
Sbjct: 649 CRVQGNVEMA 658
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 227/455 (49%), Gaps = 44/455 (9%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD---AYGKCMVMTDARRMFDDIQN-KNAVSWNVIVRR 218
K H + K+G +V + LV G ++ A+ +F++ ++ +N ++R
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y +G EA+++F +M+ I P +TF L AC+ + G+QIHG+I+K+ + D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SL Y +CG L+ AR + D+ ERN++SWTS++ GYA
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA----------------- 211
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLM-RKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R K+A+D F M R + VT+ +++ CA L +++ G++
Sbjct: 212 --------------RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V+ FI + N + +AL+DMY KC + A+ F + + NA+ + Y R+G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQG 316
Query: 458 QSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI-NVVCR 515
+ EA+ F+ M RP + + + +++C+ + ++ GK H +V+RN +E + +C
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC + A R+F S+ V+ NS++ G+ N A E F M ++ I
Sbjct: 377 -ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI- 434
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
++++ I+ + + A++ F SM+ + G+
Sbjct: 435 ---VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 263/544 (48%), Gaps = 40/544 (7%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N + + ++ Y K + +AR++FD + + AV+W +++ Y KEA +F +M
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
R P TF L C+ + Q+ IIK+ ++ +V +L + Y K RL+
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 297 DARGLLDQPDERNIIS------------------------------WTSIVSG-----YA 321
A L + E + + W VS Y+
Sbjct: 197 LACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 256
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+ +AR+LF+EMPE++ +S+N +++GY K A D ++ T D Q
Sbjct: 257 KHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFAT 316
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L++ + + +MG+++H S I V N+L+DMY KCG A + F ++ R
Sbjct: 317 MLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR- 375
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
V W A+++ Y ++G EE + F++M Q + TF +LL A A+I+SL GKQ+H
Sbjct: 376 SAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLH 435
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
F+I++ + NV AL++VY KC ++ A++ F+E +++ N+MI + N
Sbjct: 436 SFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAE 495
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
L+ F M G++PD ++F G+L AC H G V+ L F+SM Y + P+ EHY +
Sbjct: 496 ATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASV 555
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL---NELNP 677
+ + CR G E E + MP +P M + + CR + L AA +L EL
Sbjct: 556 VDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRD 615
Query: 678 WAPF 681
AP+
Sbjct: 616 AAPY 619
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 163/615 (26%), Positives = 262/615 (42%), Gaps = 138/615 (22%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ +AR+L + P N I Y K GNL +AR LFD M ER +W ++G
Sbjct: 63 LSQARQLFEKM----PHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGG 118
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS-KQLHGLIVKRGFCG 176
Y+Q ELF+ M G + +T+ +L S E+G Q+ I+K G+
Sbjct: 119 YSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL-SGCNGHEMGNQITQVQTQIIKLGYDS 177
Query: 177 NVILESSLVDAYGKCMVMTDARRMF---------------------DDI---QN------ 206
+I+ ++LVD+Y K + A ++F DDI Q
Sbjct: 178 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVI 237
Query: 207 KNAVSWNVIVRRYLVAGNGK-----EAVVMFFKMLRED---------------------- 239
K WNV V L+ K +A +F +M +D
Sbjct: 238 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 297
Query: 240 -IRPLNFT--------FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
R L FT FA L S G QIH I + + +V SL +MY
Sbjct: 298 LFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 357
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KCG+ E+A + R+ + WT+++S Y G E +LFN+M + +VI+
Sbjct: 358 KCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIA------- 410
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
DQ T +L A ++ + +GK++H FI ++ + SN
Sbjct: 411 ------------------------DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 446
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+F +ALLD+Y KCG+++ A F +M R+ VSWNA+++ YA+ G++E + SF EM
Sbjct: 447 VFSGSALLDVYAKCGSIKDAVQTFQEMPD-RNIVSWNAMISAYAQNGEAEATLKSFKEMV 505
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
+P +F +L+AC++ +E+G + N ++ ++Y +
Sbjct: 506 LSGLQPDSVSFLGVLSACSHSGLVEEG----------LWHFN-----SMTQIY------K 544
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
R +S +D++ C + R EA + LM + I PD I + +L AC
Sbjct: 545 LDPRREHYASVVDML---------CRSGRFNEAEK---LMAEMPIDPDEIMWSSVLNACR 592
Query: 590 HEGNVKLALQFFDSM 604
N +LA + D +
Sbjct: 593 IHKNQELARRAADQL 607
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 6/320 (1%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + + +++ R++ + + + + N ++ Y KCG ++A +F +
Sbjct: 314 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 373
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R W AM+ AY Q GF L+LF M + V A+Q T+A++LR+SA L + KQ
Sbjct: 374 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I+K GF NV S+L+D Y KC + DA + F ++ ++N VSWN ++ Y G
Sbjct: 434 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 493
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLG 283
+ + F +M+ ++P + +F L ACS EG+ + +I +
Sbjct: 494 AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA 553
Query: 284 SLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI----REARELFNEMPE 338
S+ +M + GR +A L+ + P + + I W+S+++ I R A +LFN
Sbjct: 554 SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL 613
Query: 339 RNVISWNAMLAGYTRSLLWK 358
R+ + M Y + W+
Sbjct: 614 RDAAPYVNMSNIYAAAGQWE 633
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 184/471 (39%), Gaps = 71/471 (15%)
Query: 241 RPLNFTFANALFACSFLSSPYEGMQ----IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
RP +L + + L SP + I I+K F+ D ++K G L
Sbjct: 5 RPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELS 64
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
AR L ++ +N +S ++SGY SG + EAR+LF+ M ER ++W ++ GY++
Sbjct: 65 QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ 124
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
+KEA + M++ + D VT +L+ C G +V I + Y S + V N
Sbjct: 125 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNT 184
Query: 417 LLDMYRKCGNLRSARIWFYQMSQ-----------------------------RRDKVSW- 446
L+D Y K L A F +M + + W
Sbjct: 185 LVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWN 244
Query: 447 ----NAVLTGYARRGQSEEAMTSFSEM---------------QWETRP------------ 475
NA+L Y++ +A F EM W+ +
Sbjct: 245 VFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQF 304
Query: 476 -----SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+F F T+L+ +N E G+QIH I + ++ +LV++Y KC E
Sbjct: 305 TAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEE 364
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A +F + + +MI + E L++F M++ + D TF +L A
Sbjct: 365 AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASAS 424
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
++ L Q S K G + + ++ +Y + G +K+ MP
Sbjct: 425 IASLSLGKQ-LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP 474
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/674 (26%), Positives = 316/674 (46%), Gaps = 57/674 (8%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDA 96
+P +Y+ A L + A + + +++ +++ F Y V + N + Y KCG+
Sbjct: 7 KPDNYAFPA-LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA-- 154
+FD + ER+ SWN+++ + LE F M V + T +V+ + +
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 155 ---EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
E L +G KQ+H +++G + I+ ++LV YGK + ++ + ++ V+
Sbjct: 126 PMPEGLMMG--KQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
WN ++ EA+ +M+ E + P FT ++ L ACS L G ++H +
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242
Query: 272 KIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
K ++ +GS L +MY C ++ R + D +R I W ++++GY+ + +EA
Sbjct: 243 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 302
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LF M E +LA T T+ ++ C
Sbjct: 303 LLFIGMEES-----AGLLANST-------------------------TMAGVVPACVRSG 332
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ +HGF+ + + FV N L+DMY + G + A F +M + RD V+WN ++
Sbjct: 333 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMI 391
Query: 451 TGYARRGQSEEAMTSFSEMQ------------WETRPSKFTFETLLAACANISSLEQGKQ 498
TGY E+A+ +MQ +P+ T T+L +CA +S+L +GK+
Sbjct: 392 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 451
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH + I+N +V ALV++Y KC CL+ + +VF + +VI N +I+ + +
Sbjct: 452 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 511
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
G+EA+++ +M +G+KP+ +TF + AC H G V L+ F M+ YG+ P +HY
Sbjct: 512 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 571
Query: 619 CMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
C++ L R G +KE +N MP FN + R + +GE AA+ L +L
Sbjct: 572 CVVDLLGRAGRIKEAYQLMNMMPRDFNKA-GAWSSLLGASRIHNNLEIGEIAAQNLIQLE 630
Query: 677 PWAPFQFKITTNRF 690
P + + N +
Sbjct: 631 PNVASHYVLLANIY 644
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 223/466 (47%), Gaps = 45/466 (9%)
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVILESSLVDAYGKCMVMTD 196
G+ + + +L++ A+ ++ + KQ+H + K G+ +V + ++LV+ Y KC
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
++FD I +N VSWN ++ + A+ F ML E++ P +FT + + ACS
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L P EG+ + G+ A GL + E N ++
Sbjct: 125 LPMP-EGLMM--------------------------GKQVHAYGL--RKGELNSFIINTL 155
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
V+ Y G++ ++ L R++++WN +L+ ++ EAL+++ M + D+
Sbjct: 156 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 215
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
T+ +L C+ L ++ GKE+H + +N N FV +AL+DMY C + S R F
Sbjct: 216 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 275
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSL 493
M R+ + WNA++ GY++ +EA+ F M+ + T ++ AC +
Sbjct: 276 GMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 334
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ + IH FV++ + + + L+++Y++ ++ A+R+F + D++ N+MI G+
Sbjct: 335 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 394
Query: 554 CHNERGREALEVFGLMK-----------KEGIKPDHITFHGILLAC 588
+E +AL + M+ + +KP+ IT IL +C
Sbjct: 395 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 440
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 34/345 (9%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH- 136
F+ N ++ Y + G +D A +F +M +RD +WN M+ Y + L L M +
Sbjct: 354 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 413
Query: 137 -----SGVS-----ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
G S N IT +L S A L K++H +K +V + S+LVD
Sbjct: 414 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 473
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + +R++FD I KN ++WNVI+ Y + GNG+EA+ + M+ + ++P T
Sbjct: 474 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 533
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLD- 303
F + ACS EG++I ++K D+ E + ++ + GR+++A L++
Sbjct: 534 FISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 592
Query: 304 QPDERNII-SWTSIVSGYAISGRIR----EARELFNEMPERNVISWNAMLAG-YTRSLLW 357
P + N +W+S++ I + A+ L P NV S +LA Y+ + LW
Sbjct: 593 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLW 650
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+A + +R+ K+ + G S I+ G EVH F+
Sbjct: 651 DKATE----VRRNMKEQG-------VRKEPGCSWIEHGDEVHKFV 684
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/633 (25%), Positives = 296/633 (46%), Gaps = 67/633 (10%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN-QITYANVLRSSAEELELGVSKQLHGLI 169
W + + P + L FL+ S S + +++ + L+ A + +Q+H ++
Sbjct: 28 WVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIV 87
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY---------- 219
+K GF N + +SL++ Y KC +++ AR +FD ++VS N+++ Y
Sbjct: 88 LKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENAR 147
Query: 220 ----------------LVAGNGK-----EAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++ G + EA+ +F M + P T A+ + ACS +
Sbjct: 148 QLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIG 207
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+ +H ++IK+ F G ++ +L MY L+D + L ++ RN +SW ++
Sbjct: 208 GIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLK 267
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY SG + +ARELF +PER+V SW M+ G+ + ++AL MRK+ ++V
Sbjct: 268 GYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVL 327
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ +L+ C I+ G++ H I +N + F+ ++ Y C + A + YQMS
Sbjct: 328 IVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ-YQMS 386
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEM------QWET------------------- 473
+ S N ++ G+ + G ++A F M W T
Sbjct: 387 DKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFH 446
Query: 474 -------RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
P++ T ++ +A A + L +G+ H +V +N A++++Y KC
Sbjct: 447 GMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCG 506
Query: 527 CLEYAIRVFKE--SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
++ A+ VF++ + V N++I G + +LE+F +++ IK + ITF G+
Sbjct: 507 SIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGV 566
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V++ ++F SM+ ++G+ P ++HY C++ L R G ++E E+ V MP
Sbjct: 567 LSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKA 626
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
V + + R +G +GE AA L L P
Sbjct: 627 DVVIWGTLLASSRTHGEVEIGERAAENLARLQP 659
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 157/607 (25%), Positives = 291/607 (47%), Gaps = 78/607 (12%)
Query: 15 KSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHL-----FQLCASSKAIVEARKLESNLV 69
+SSP+P + L+ ++G P S SL L + CASS AI +++ + ++
Sbjct: 36 ESSPRPL--QNLSSFLNG-----RPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIVL 88
Query: 70 TFYPTPPVFLLNRAIECYGKCG-------------------------------NLDDARG 98
+ F+LN I Y KCG L++AR
Sbjct: 89 KYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQ 148
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LF +MPER S+ M+ QN G +E+F DM +GV+ N++T A+V+ + +
Sbjct: 149 LFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGG 208
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + LH L++K F G V++ ++L+ Y + D +R+F+++ +N VSWNV+++
Sbjct: 209 IWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKG 268
Query: 219 YLVAG------------------------NG-------KEAVVMFFKMLREDIRPLNFTF 247
Y+ +G +G ++A++++ M + D+ P
Sbjct: 269 YVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLI 328
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
+ L AC S EG Q H +I+K F D + ++ Y C R++ A D+
Sbjct: 329 VDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDK 388
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
++ S ++ G+ +G I +AR++F+ MPE++V SW+ M++GY ++ L ALD M
Sbjct: 389 SHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGM 448
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ + +++T+ + + A L ++ G+ H ++ N +S A++DMY KCG++
Sbjct: 449 IDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSI 508
Query: 428 RSARIWFYQMSQRRDKVS-WNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLA 485
+A F Q+ + VS WNA++ G A G + ++ FS +Q + + + TF +L+
Sbjct: 509 DTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLS 568
Query: 486 ACANISSLEQGKQ-IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDV 543
AC + +E G++ ++ E N+ G LV++ + L A + + DV
Sbjct: 569 ACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADV 628
Query: 544 IICNSMI 550
+I +++
Sbjct: 629 VIWGTLL 635
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 176/448 (39%), Gaps = 80/448 (17%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K G +D AR LF+ +PERD SW M+ + Q + L L+ M S +
Sbjct: 263 NVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLH 322
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM-------- 192
N++ ++L + + + + +Q H LIVK GF ++++++ Y C
Sbjct: 323 PNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ 382
Query: 193 -----------------------VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
++ AR++FD + K+ SW+ ++ Y A+
Sbjct: 383 YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVAL 442
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F M+ + P T + A + L EG H + +D + ++ +MY
Sbjct: 443 DLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMY 502
Query: 290 VKCGRLEDARGLLDQ-PDERNIIS-WTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
KCG ++ A + Q D+ + +S W +I+ G A+ G + E+F+ + R++
Sbjct: 503 AKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSI------ 556
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC--AGLSEIK-----MGKEVHG 400
++ +T +L+ C AGL E+ K HG
Sbjct: 557 -------------------------KLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHG 591
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ-- 458
NI L+D+ + G LR A M + D V W +L G+
Sbjct: 592 V------EPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVE 645
Query: 459 -SEEAMTSFSEMQWETRPSKFTFETLLA 485
E A + + +Q P + L A
Sbjct: 646 IGERAAENLARLQPSHGPGRVLLSNLYA 673
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 255/514 (49%), Gaps = 35/514 (6%)
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
L + L++ Y K AR + +N VSW +V G+ A+ FF+M RE
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREG 103
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ P +FTF A + L P G QIH + +K D V S +MY K RL D
Sbjct: 104 VAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT-RLRD-- 160
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+AR+LF+E+PERN+ +WNA ++ KE
Sbjct: 161 ----------------------------DARKLFDEIPERNLETWNAYISNSVTDGRPKE 192
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A++ R+ + +T LN C+ + +G ++HG + R+ + +++ V N L+D
Sbjct: 193 AIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLID 252
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
Y KC +RS+ I F +M + + VSW +++ Y + + E+A + + E S F
Sbjct: 253 FYGKCKQIRSSEIIFAEMGMK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDF 311
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
++L+ACA ++ LE G+ IH ++ C E N+ ALV++Y KC C+E + + F E
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI--KPDHITFHGILLACIHEGNVKL 596
+++ NS+I G+ H + AL +F M G P+++TF +L AC G V+
Sbjct: 372 PEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVEN 431
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC 656
++ FDSM+ YGI P EHY C++ + R G +++ +F+ +MP PT+ + + + C
Sbjct: 432 GMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNAC 491
Query: 657 RKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
R +G LG AA L +L+P + +N F
Sbjct: 492 RMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTF 525
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 220/457 (48%), Gaps = 38/457 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
L + S+ ++ R + + +V T PP FL N I Y K + + AR + P R
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS-KQL 165
+ SW +++ QNG L F +M GV+ N T+ V ++ A L L V+ KQ+
Sbjct: 72 NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVAS-LRLPVTGKQI 130
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H L VK G +V + S D Y K + DAR++FD+I +N +WN + + G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
KEA+ F + R +P + TF L ACS GMQ+HG++ + F+ D V L
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+ Y KC ++ + + + +N +SW S+V+ Y + +A L
Sbjct: 251 IDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVL------------- 297
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
Y RS RK + + +L+ CAG++ +++G+ +H +
Sbjct: 298 -----YLRS-------------RKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
NIFV +AL+DMY KCG + + F +M + ++ V+ N+++ GYA +GQ + A+
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPE-KNLVTLNSLIGGYAHQGQVDMALAL 398
Query: 466 FSEMQWE---TRPSKFTFETLLAACANISSLEQGKQI 499
F +M P+ TF +LL+AC+ ++E G +I
Sbjct: 399 FEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 212/433 (48%), Gaps = 14/433 (3%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+F+ AS + V +++ + V VF+ A + Y K DDAR LFDE+PER+
Sbjct: 114 VFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERN 173
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
+WNA + +G P +E F++ G N IT+ L + ++ L L + Q+HG
Sbjct: 174 LETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHG 233
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
L+ + GF +V + + L+D YGKC + + +F ++ KNAVSW +V Y+ ++
Sbjct: 234 LVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEK 293
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A V++ + +E + +F ++ L AC+ ++ G IH +K E + V +L +
Sbjct: 294 ASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVD 353
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNV 341
MY KCG +ED+ D+ E+N+++ S++ GYA G++ A LF +M P N
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNY 413
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT--LGLILNVCAGLSEIKMGKEVH 399
+++ ++L+ +R+ + + +F K+T I+ I+++ L M ++
Sbjct: 414 MTFVSLLSACSRAGAVENGMK-IFDSMKSTYGIEPGAEHYSCIVDM---LGRAGMVEQAF 469
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRG 457
FI + I V AL + R G + + + K S N VL +A G
Sbjct: 470 EFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAG 529
Query: 458 QSEEAMTSFSEMQ 470
+ EA T EM+
Sbjct: 530 RWAEANTVREEMK 542
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 4/259 (1%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
LGL+L S +++G+ VH I + D F++N L++MY K + SAR+ +
Sbjct: 8 ALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL-VLR 66
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
++ R+ VSW ++++G A+ G A+ F EM+ E P+ FTF + A A++
Sbjct: 67 LTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVT 126
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GKQIH ++ ++V + ++Y K + A ++F E ++ N+ I
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVT 186
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ R +EA+E F ++ G +P+ ITF G L AC + L +Q + + G +
Sbjct: 187 DGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQ-MHGLVFRSGFDTDVS 245
Query: 616 HYECMIKLYCRYGYMKELE 634
Y +I Y + ++ E
Sbjct: 246 VYNGLIDFYGKCKQIRSSE 264
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ + + CA + R + ++ V +F+ + ++ YGKCG ++D+ FDEM
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV--SANQITYANVLRS 152
PE++ + N+++G Y G L LF DM G + N +T+ ++L +
Sbjct: 372 PEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSA 422
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 172/619 (27%), Positives = 289/619 (46%), Gaps = 71/619 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + + YGKCG LDDAR +FDE+PER+ +WNA++ Y QNG + LF DM
Sbjct: 208 VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRK 267
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
GV ++T + L +SA + KQ H + + G + IL +SL++ Y K ++
Sbjct: 268 EGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEY 327
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +FD + +K+ V+WN+I+ Y+ G + A+ M M E ++ T A + A +
Sbjct: 328 AEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G ++ I+ FE D V+ ++ +MY KC
Sbjct: 388 TQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC------------------------ 423
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
G I +A+++F+ E+++I WN +LA Y S L E L + M+ +
Sbjct: 424 -------GSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNV 476
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T LI+ L + R G + A+ F Q
Sbjct: 477 ITWNLII----------------------------------LSLLRN-GEVDEAKDMFLQ 501
Query: 437 MSQR---RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
M + +SW ++ G + G SEEA+ +MQ RP+ + L+ACAN++S
Sbjct: 502 MQSSGIFPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLAS 561
Query: 493 LEQGKQIHCFVIRNC-YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
L G+ IH ++IRN + +V +LV++Y KC + A +VF ++ + N+MI
Sbjct: 562 LHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMIS 621
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ +EA+ ++ ++ G+KPD+IT +L AC H G+ A + M K+G+
Sbjct: 622 AYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMN 681
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P LEHY M+ L G + + MP+ P M++ + C K + L ++ +R+
Sbjct: 682 PCLEHYGLMVDLLASAGQTDKALRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQ 741
Query: 672 LNELNPWAPFQFKITTNRF 690
L E P + +N +
Sbjct: 742 LIESEPDNSGNYVTISNAY 760
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 36/524 (6%)
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG--FCGN 177
+NG L L +M+ + Y +L+ E +L KQ+H I+K G + N
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYAKN 106
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+E+ LV Y KC + A +F ++ +N SW I+ G + A++ F +ML
Sbjct: 107 EYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED 297
+I P NF N AC L G +HG ++K E V SL +MY KCG L+D
Sbjct: 167 NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDD 226
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
AR ++F+E+PERNV++WNA++ GY ++ +
Sbjct: 227 AR-------------------------------KVFDEIPERNVVAWNALMVGYVQNGMN 255
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+EA+ MRK + +VT+ L+ A + ++ GK+ H N + + +L
Sbjct: 256 EEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSL 315
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPS 476
L+ Y K G + A + F +M + D V+WN +++GY ++G E A+ M+ E +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMIDK-DVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYD 374
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
T TL++A A +L+ GK++ C+ IR+ +E ++V ++++Y KC + A +VF
Sbjct: 375 CVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD 434
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
++ D+I+ N+++ + + E L +F M+ EG+ P+ IT++ I+L+ + G V
Sbjct: 435 STAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDE 494
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
A F M+ GI P L + M+ + G +E F+ +M
Sbjct: 495 AKDMFLQMQSS-GIFPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 271/601 (45%), Gaps = 53/601 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y + Q C + + +++ + ++ FY ++ + + Y KC LD A LF
Sbjct: 72 IYGEILQGCVYERDLCTGKQIHARILKNGDFYAKNE-YIETKLVIFYAKCDALDIAEVLF 130
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
++ R+ SW A++G + G L F++M + + + NV ++
Sbjct: 131 TKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSR 190
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ +HG +VK G V + SSL D YGKC V+ DAR++FD+I +N V+WN ++ Y+
Sbjct: 191 FGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYV 250
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +EA+ +F M +E + P T + L A + + EG Q H + I E D++
Sbjct: 251 QNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNI 310
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ SL Y K G +E A + D+ ++++++W I+SGY G
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQG---------------- 354
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
L + A+ LMR D VTL +++ A +K+GKEV
Sbjct: 355 ---------------LVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQC 399
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ R+ + S+I +++ ++DMY KCG++ A+ F ++ +D + WN +L YA G S
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAE-KDLILWNTLLAAYAESGLSG 458
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
E + F MQ E P+ T+ ++ + +++ K + + + N++ ++
Sbjct: 459 EGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMM 518
Query: 520 EVYTKCCCLEYAI---RVFKESSSLDVIICNSMILGFCHN----ERGREALEVFGLMKKE 572
+ C E AI R +ES + ++ L C N GR + G + +
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGR---SIHGYIIRN 575
Query: 573 GIKPDHITFHGILLACIHE-GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
++ L+ + G++ A + F S + +L Y MI Y YG +K
Sbjct: 576 LQHSSSVSIETSLVDMYAKCGDINKAEKVFGS-----KLYSELPLYNAMISAYALYGNLK 630
Query: 632 E 632
E
Sbjct: 631 E 631
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 183/404 (45%), Gaps = 35/404 (8%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+++ D N ++ S+ V G KEA+ + +M ++R + L C +
Sbjct: 23 SKQHDDQALNPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVY 82
Query: 257 LSSPYEGMQIHGVIIKI-DFEG-DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
G QIH I+K DF ++ + L Y KC L+ A L + RN+ SW
Sbjct: 83 ERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWA 142
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
+I+ G A F EM E + N ++ ++
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA-------------------- 182
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
C L + G+ VHG++ + +FV+++L DMY KCG L AR F
Sbjct: 183 -----------CGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVF 231
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
++ + R+ V+WNA++ GY + G +EEA+ FS+M+ E P++ T T L+A AN+ +
Sbjct: 232 DEIPE-RNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGV 290
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E+GKQ H I N E++ + +L+ Y K +EYA VF DV+ N +I G+
Sbjct: 291 EEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGY 350
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
A+ + LM+ E +K D +T ++ A N+KL
Sbjct: 351 VQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLG 394
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPER----DGGSWNAMLGAYTQNGFPGRTLEL 130
P V N I + G +D+A+ +F +M + SW M+ QNG +
Sbjct: 474 PNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYG 189
M SG+ N ++ L + A L + +HG I++ +V +E+SLVD Y
Sbjct: 534 LRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYA 593
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + A ++F +N ++ Y + GN KEA+ ++ + ++P N T N
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 250 ALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL---GSLTEMYVKCGRLEDARGLLDQ-- 304
L AC+ + +I V + G + L G + ++ G+ + A L+++
Sbjct: 654 VLSACNHAGDNNQATEI--VTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKALRLIEEMP 711
Query: 305 --PDERNIISWTS 315
PD R I S +
Sbjct: 712 YKPDARMIQSLVA 724
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 275/580 (47%), Gaps = 74/580 (12%)
Query: 166 HGLI-----VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
HGL+ +K GF + + + L+ Y K ++ DA+++FD++ +N SWN I+ Y+
Sbjct: 429 HGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYV 488
Query: 221 VAGNGKEAVVMFFKMLRED----------------------------------IRPLNFT 246
+ N ++A +F + +D IR FT
Sbjct: 489 KSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFT 548
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQP 305
L + L G Q+H ++K + SL +MY KCG ++A R
Sbjct: 549 LITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCG 608
Query: 306 DERNIISWTSIVSGYAISGRIREARELF-NEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+ + +S ++V+ G I A +LF E+ + +V++WN M++G+ ++ +E+L
Sbjct: 609 EVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLF 668
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M ++ T +L+ C+ L +K+GKEVH ++ +N +N F+ + L+D+Y KC
Sbjct: 669 VRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKC 728
Query: 425 GNLR-------------------------------SARIWFYQMSQRRDKVSWNAVLTGY 453
N+R AR F + ++ + V W A+ GY
Sbjct: 729 NNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEK-NSVVWTALFFGY 787
Query: 454 ARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
+ Q E SE + E + P +++ ACA ++L GKQIH +++R +++
Sbjct: 788 VKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDT 847
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+LV++Y+KC + YA R+F+E + D II N MI G+ H+ EA+++F M K
Sbjct: 848 KLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKH 907
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G KPD ITF +L AC H G V+L FFDSM Y I P+++HY CMI LY R + +
Sbjct: 908 GFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDK 967
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+F+ ++P + + CR NG A L A L
Sbjct: 968 ALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDEL 1007
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 275/600 (45%), Gaps = 104/600 (17%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ------------- 120
TP +F+ N+ I Y K G L+DA+ LFDEMPER+ SWNA++ AY +
Sbjct: 443 TPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARALFDS 502
Query: 121 -------------------NGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELEL 159
+G+ G+ L F++M + + ++ T +L +A+ +
Sbjct: 503 AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVI 562
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF------------------ 201
KQLH ++K V SSL+D Y KC +A R++
Sbjct: 563 SYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAA 622
Query: 202 ---------------DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
+++ + V+WN ++ ++ G +E++ +F +M E + T
Sbjct: 623 CCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHT 682
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
FA+ L ACS L S G ++H ++K + + L ++Y KC + A + +
Sbjct: 683 FASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVNSELR 742
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+N+ S TS++ GY+ G + EAR+LF+ + E+N + W A+ GY + + + +
Sbjct: 743 MQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVFELLSE 802
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
RK K D + L I+ CA + + GK++H ++ R + ++++L+DMY KCG+
Sbjct: 803 YRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGS 862
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA 485
+ A F +++ +D + +N ++ GYA G EA+ F EM + +P TF LL+
Sbjct: 863 IIYAERIFREVTD-KDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLS 921
Query: 486 ACANISSLEQGKQIHCF-VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
AC + +E G+ H F + N Y I C E+ C ++ ++ ++ LD
Sbjct: 922 ACRHGGLVELGE--HFFDSMSNDYNI---CP----EIDHYACMID----LYGRANQLD-- 966
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ALE M+K I+ D + + L AC GN +LA + D +
Sbjct: 967 ----------------KALE---FMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDEL 1007
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 75/352 (21%)
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-------- 440
+ +K G H ++ ++ IF+SN L+ Y K G L A+ F +M +R
Sbjct: 424 MKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAI 483
Query: 441 ----------------------RDKVSWNAVLTGYARR-GQSEEAMTSFSEMQWE---TR 474
+D V++N++L+GYAR G +A+ F EMQ R
Sbjct: 484 IAAYVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIR 543
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC--------- 525
+FT T+L A + + GKQ+H F+++ ++ V +L+++Y+KC
Sbjct: 544 IDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRV 603
Query: 526 -------------------CCLEYAIRV-----FKESSSLDVIICNSMILGFCHNERGRE 561
CC E I V +KE DV+ N+MI GF N E
Sbjct: 604 YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 663
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
+L++F M E + + TF +L AC + ++KL + + K +I ++
Sbjct: 664 SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKE-VHAYVLKNRLIANPFICSGLV 722
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA-ARRL 672
+YC+ M+ E + + + I GY++ G A AR+L
Sbjct: 723 DVYCKCNNMRYAESVNSELRMQNVYSITSMIV------GYSSQGNMAEARKL 768
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 284/603 (47%), Gaps = 41/603 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K G LD A +FD M RD SWN M+ + G + L F
Sbjct: 88 NSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFE 147
Query: 141 ANQITYANVLRS--SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N T + + S +E G+ ++HG I++ GF +++SL+ Y M A
Sbjct: 148 PNVSTLVLAIHACRSLGAMEEGL--KMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAE 204
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFL 257
+FD++ ++ +SW+V++ Y+ G K A+ +F +M L+ T + L AC+
Sbjct: 205 ELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANT 264
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +HGV+I + D V S+ +MY KC E
Sbjct: 265 GDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHE--------------------- 303
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
A + FNEMP RN +SWN++++G R+ EAL + M K D+V
Sbjct: 304 ----------SAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEV 353
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL +L C + K +H + R Y N FV N+L+D Y KC + A F ++
Sbjct: 354 TLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRL 413
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ +D VSW+A++ G+ G+ +EA+ F EM Q + +P+ T +LL A + + L++
Sbjct: 414 -KTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRS 472
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K H IR V A++++Y KC + + + F + +++ +MI N
Sbjct: 473 KWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMN 532
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
R+AL + MK G+KP+ +T +L AC H G V+ L FF++M +G+ P LEH
Sbjct: 533 GLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEH 592
Query: 617 YECMIKLYCRYGYMKELEDFVNRMP--FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
Y CM+ + R G + + + +MP + + CR +G + LG AA R+ E
Sbjct: 593 YSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLE 652
Query: 675 LNP 677
L P
Sbjct: 653 LEP 655
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/550 (26%), Positives = 255/550 (46%), Gaps = 37/550 (6%)
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
+ M +G T + + + L + K +H ++K+GF +S++D Y K
Sbjct: 37 YHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMK 96
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
+ A +FD ++++++VSWN+++ +L G + + F + P T A
Sbjct: 97 TGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLA 156
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
+ AC L + EG+++HG II+ F V SL MY +E A L D+ ER++
Sbjct: 157 IHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDV 215
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
ISW+ ++ GY +G + A +LF EM I
Sbjct: 216 ISWSVMIGGYVQTGEAKMALQLFLEMTSNASI---------------------------- 247
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
++D +T+ +L CA +I MG+ VHG + ++FV N+++DMY KC + SA
Sbjct: 248 --ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESA 305
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
F +M R+ VSWN++++G R + EA++ F M + R + T LL +C
Sbjct: 306 FKAFNEMPC-RNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKY 364
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
Q K IH VIR YE+N +L++ Y+KC +E A ++F + D + ++M
Sbjct: 365 FVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAM 424
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I GF H + EA+ +F M + KP+ +T +L A ++K + ++ + + G
Sbjct: 425 IAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRS-KWAHGIAIRRG 483
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA--TLGEW 667
+ ++ ++ +Y + G + +++P + + C NG A L
Sbjct: 484 LAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAACGMNGLARDALALL 542
Query: 668 AARRLNELNP 677
+ +L+ L P
Sbjct: 543 SEMKLHGLKP 552
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 39/449 (8%)
Query: 52 CASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG 109
C S A+ E K+ ++ F P V N + Y +++ A LFDEM ERD
Sbjct: 160 CRSLGAMEEGLKMHGYIIRSGFLDIPSV--QNSLLSMYAD-NDMERAEELFDEMCERDVI 216
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SW+ M+G Y Q G L+LFL+M +++ + + IT +VL++ A ++ + + +HG+
Sbjct: 217 SWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGV 276
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
++ RG ++ + +S++D Y KC A + F+++ +N VSWN I+ + EA
Sbjct: 277 VICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEA 336
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+ +F+ M + R T N L +C + P++ IH ++I+ +E ++ V+ SL +
Sbjct: 337 LSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDA 396
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y KC +E A L D+ ++ +SW+++++G+ G+ EA LF E
Sbjct: 397 YSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE------------- 443
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
M + + + VT+ +L + +++K K HG R +
Sbjct: 444 ------------------MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLA 485
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE 468
+ + V A+LDMY KCG + +R F Q+ + ++ VSW A++ G + +A+ SE
Sbjct: 486 AEVAVGTAILDMYAKCGEIGLSRKAFDQIPE-KNIVSWGAMIAACGMNGLARDALALLSE 544
Query: 469 MQWE-TRPSKFTFETLLAACANISSLEQG 496
M+ +P+ T ++L+AC++ +E+G
Sbjct: 545 MKLHGLKPNVVTTLSVLSACSHGGLVEEG 573
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 166/320 (51%), Gaps = 4/320 (1%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA++ I R + ++ +F+ N I+ Y KC + + A F+EMP R+
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRN 316
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN+++ + L LF M +G A+++T N+L+S ++ K +H
Sbjct: 317 TVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHS 376
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
++++ G+ N + +SL+DAY KC ++ A ++FD ++ K+ VSW+ ++ + G E
Sbjct: 377 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDE 436
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +F +M + +P T + L A S + HG+ I+ + V ++ +
Sbjct: 437 AIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILD 496
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP----ERNVIS 343
MY KCG + +R DQ E+NI+SW ++++ ++G R+A L +EM + NV++
Sbjct: 497 MYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVT 556
Query: 344 WNAMLAGYTRSLLWKEALDF 363
++L+ + L +E L F
Sbjct: 557 TLSVLSACSHGGLVEEGLSF 576
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 274/580 (47%), Gaps = 74/580 (12%)
Query: 166 HGLI-----VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
HGL+ +K GF + + + L+ Y K ++ DA+++FD++ +N SWN I+ Y+
Sbjct: 429 HGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYV 488
Query: 221 VAGNGKEAVVMFFKMLRED----------------------------------IRPLNFT 246
+ N ++A +F + +D IR FT
Sbjct: 489 KSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFT 548
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQP 305
L + L G Q+H ++K + SL +MY KCG ++A R
Sbjct: 549 LITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCG 608
Query: 306 DERNIISWTSIVSGYAISGRIREARELF-NEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+ + +S ++V+ G I A +LF E+ + +V++WN M++G+ ++ +E+L
Sbjct: 609 EVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLF 668
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
M ++ T +L+ C+ L +K+GKEVH ++ +N +N F+ + L+D+Y KC
Sbjct: 669 VRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKC 728
Query: 425 GNLR-------------------------------SARIWFYQMSQRRDKVSWNAVLTGY 453
N+R AR F + ++ V W A+ GY
Sbjct: 729 NNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAV-WTALFFGY 787
Query: 454 ARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV 512
+ Q E SE + E + P +++ ACA ++L GKQIH +++R +++
Sbjct: 788 VKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDT 847
Query: 513 VCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE 572
+LV++Y+KC + YA R+F+E + D II N MI G+ H+ EA+++F M K
Sbjct: 848 KLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKH 907
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
G KPD ITF +L AC H G V+L FFDSM Y I P+++HY CMI LY R + +
Sbjct: 908 GFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDK 967
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+F+ ++P + + CR NG A L A L
Sbjct: 968 ALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDEL 1007
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 275/600 (45%), Gaps = 104/600 (17%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ------------- 120
TP +F+ N+ I Y K G L+DA+ LFDEMPER+ SWNA++ AY +
Sbjct: 443 TPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNLRQARALFDS 502
Query: 121 -------------------NGFPGRTLELFLDMNHSG--VSANQITYANVLRSSAEELEL 159
+G+ G+ L F++M + + ++ T +L +A+ +
Sbjct: 503 AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAKLCVI 562
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF------------------ 201
KQLH ++K V SSL+D Y KC +A R++
Sbjct: 563 SYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNAMVAA 622
Query: 202 ---------------DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
+++ + V+WN ++ ++ G +E++ +F +M E + T
Sbjct: 623 CCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGWNEHT 682
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD 306
FA+ L ACS L S G ++H ++K + + L ++Y KC + A+ + +
Sbjct: 683 FASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVNSELR 742
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+N+ S TS++ GY+ G + EAR+LF+ + E+N W A+ GY + + + +
Sbjct: 743 MQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVFELLSE 802
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
RK K D + L I+ CA + + GK++H ++ R + ++++L+DMY KCG+
Sbjct: 803 YRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGS 862
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA 485
+ A F +++ +D + +N ++ GYA G EA+ F EM + +P TF LL+
Sbjct: 863 IIYAERIFREVTD-KDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLS 921
Query: 486 ACANISSLEQGKQIHCF-VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
AC + +E G+ H F + N Y I C E+ C ++ ++ ++ LD
Sbjct: 922 ACRHGGLVELGE--HFFDSMSNDYNI---CP----EIDHYACMID----LYGRANQLD-- 966
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
+ALE M+K I+ D + + L AC GN +LA + D +
Sbjct: 967 ----------------KALE---FMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDEL 1007
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 119/276 (43%), Gaps = 67/276 (24%)
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-------- 440
+ +K G H ++ ++ IF+SN L+ Y K G L A+ F +M +R
Sbjct: 424 MKHLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAI 483
Query: 441 ----------------------RDKVSWNAVLTGYARR-GQSEEAMTSFSEMQWE---TR 474
+D V++N++L+GYAR G +A+ F EMQ R
Sbjct: 484 IAAYVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIR 543
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC--------- 525
+FT T+L A + + GKQ+H F+++ ++ V +L+++Y+KC
Sbjct: 544 IDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRV 603
Query: 526 -------------------CCLEYAIRV-----FKESSSLDVIICNSMILGFCHNERGRE 561
CC E I V +KE DV+ N+MI GF N E
Sbjct: 604 YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 663
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+L++F M E + + TF +L AC + ++KL
Sbjct: 664 SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLG 699
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 258/536 (48%), Gaps = 34/536 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T+ +L+ A +L + +H + RG I ++L + Y KC DARR+FD +
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNFTFANALFACSFLSSPYE 262
+++ V+WN +V Y G A+ +M E+ RP + T + L AC+ + +
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
++H ++ + V ++ + Y KCG +E AR + D RN +SW +++ GYA
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G EA LF M + V D+ ++
Sbjct: 198 NGNATEAMALFWRMVQEGV-------------------------------DVTDASVLAA 226
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L C L + + VH + R SSN+ V+NAL+ Y KC A F ++ ++
Sbjct: 227 LQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKT 286
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHC 501
++SWNA++ G+ + E+A F+ MQ E RP FT +++ A A+IS Q + IH
Sbjct: 287 RISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHG 346
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
+ IR+ + +V AL+++Y+KC + A R+F + VI N+MI G+ + G+
Sbjct: 347 YSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQA 406
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+E+F MK G P+ TF +L AC H G V ++F SM+ YG+ P +EHY M+
Sbjct: 407 AVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMV 466
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R G + E F+ MP P + + + C+ + L E +A+ + EL P
Sbjct: 467 DLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGP 522
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 261/556 (46%), Gaps = 49/556 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L +LCA+ + R + + L Y KC DAR +FD MP
Sbjct: 19 FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMP 78
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMN--HSGVSANQITYANVLRSSAEELELGVS 162
RD +WNA++ Y +NG P +E + M G + +T +VL + A+ L
Sbjct: 79 SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHAC 138
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+++H ++ G V + ++++DAY KC + AR +FD + +N+VSWN ++ Y
Sbjct: 139 REVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADN 198
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
GN EA+ +F++M++E + + + AL AC L E ++H +++++ + V
Sbjct: 199 GNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVT 258
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV- 341
+L Y KC R + A ++FNE+ +
Sbjct: 259 NALITTYAKCKRAD-------------------------------LAAQVFNELGNKKTR 287
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
ISWNAM+ G+T++ ++A M+ D TL ++ A +S+ + +HG+
Sbjct: 288 ISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGY 347
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
R+ +++V AL+DMY KCG + AR F ++ R ++WNA++ GY G +
Sbjct: 348 SIRHQLDQDVYVLTALIDMYSKCGRVSIARRLF-DSARDRHVITWNAMIHGYGSHGFGQA 406
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN-CYEINVVCRGALV 519
A+ F EM+ + P++ TF ++LAAC++ +++G++ + ++ E + G +V
Sbjct: 407 AVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMV 466
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE-----VFGLMKKEGI 574
++ + L+ A K I +LG C + E E +F L +EG+
Sbjct: 467 DLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGV 526
Query: 575 KPDHITFHGILLACIH 590
+H +LLA I+
Sbjct: 527 ------YH-VLLANIY 535
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 179/355 (50%), Gaps = 6/355 (1%)
Query: 20 PTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFL 79
P+ + + G + P S +L + + CA ++A+ R++ + + V +
Sbjct: 98 PSSAMEAVVRMQGEEGGERPDSVTLVS-VLPACADARALHACREVHAFALRAGLDELVNV 156
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
++ Y KCG ++ AR +FD MP R+ SWNAM+ Y NG + LF M GV
Sbjct: 157 STAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGV 216
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ L++ E L +++H L+V+ G NV + ++L+ Y KC A +
Sbjct: 217 DVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQ 276
Query: 200 MFDDIQNKNA-VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
+F+++ NK +SWN ++ + ++A +F +M E++RP +FT + + A + +S
Sbjct: 277 VFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADIS 336
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
P + IHG I+ + D VL +L +MY KCGR+ AR L D +R++I+W +++
Sbjct: 337 DPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIH 396
Query: 319 GYAISGRIREARELFNEMPER----NVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
GY G + A ELF EM N ++ ++LA + + L E + M+K
Sbjct: 397 GYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKK 451
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 182/443 (41%), Gaps = 72/443 (16%)
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
P+ TF L C+ + G +H + + + +L MY KC R DAR +
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D+ R+ ++W ++V+GYA +G A E M G R
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEE---------GGERP------- 117
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
D VTL +L CA + +EVH F R + VS A+LD Y
Sbjct: 118 -------------DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAY 164
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTF 480
KCG + +AR F M R+ VSWNA++ GYA G + EAM F M E + +
Sbjct: 165 CKCGAVEAARAVFDCMPV-RNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASV 223
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
L AC + L++ +++H ++R NV AL+ Y KC + A +VF E +
Sbjct: 224 LAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGN 283
Query: 541 LDVIIC-NSMILGFCHNERGREALEVFGLMKKEGIKPDHITF------------------ 581
I N+MILGF NE +A +F M+ E ++PD T
Sbjct: 284 KKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARW 343
Query: 582 -HG------------ILLACIHE----GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
HG +L A I G V +A + FDS R ++ I + MI Y
Sbjct: 344 IHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVIT-----WNAMIHGY 398
Query: 625 CRYGYMKELEDFVNRMPFNPTVP 647
+G+ + + M ++P
Sbjct: 399 GSHGFGQAAVELFEEMKGTGSLP 421
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/643 (26%), Positives = 313/643 (48%), Gaps = 41/643 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDA 96
P +YSL L AS + A+++ V FY P FL + I Y CG DA
Sbjct: 154 PDAYSL---CILLGASDGHLGYAKQIHGYSVRKVFYGDP--FLESGLIYMYFSCGRPLDA 208
Query: 97 RGLFDEMPERDGG-SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
LF E+ ++ +WN M+G + +NG +LE++L + V ++ + L + +
Sbjct: 209 WRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQ 268
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ Q+H +VK GF + + +SL+ Y KC ++ DA +FD + K WN +
Sbjct: 269 GEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAM 328
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y+ G + + ++ +M I P + T N L +C + S G IH ++K
Sbjct: 329 ISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPI 388
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ + + +L MY KCG +DA + + R++++W S++SG+ + + EA E +N
Sbjct: 389 QSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNS 448
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M K DI + +++ C GL + +G
Sbjct: 449 M---------------------------TVYGEKPDSDI----MASVVSACTGLKNVNLG 477
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+HG ++ ++FV+++L+DMY K + + F M ++ V+WN++++ Y R
Sbjct: 478 CTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMP-LKNLVAWNSIISCYCR 536
Query: 456 RGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G + +++ FS+M Q+ P + ++L + ++++ L +GK +H ++IR ++
Sbjct: 537 NGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQL 596
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
AL+++Y KC L+YA +F+ +++ N MI G + +A+ +F M+ GI
Sbjct: 597 ENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGI 656
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PD ITF +L +C H G ++ L+ F M ++GI P++EHY ++ L R G + +
Sbjct: 657 APDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAY 716
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
FV +P P + + CR + LG+ AA +L ++ P
Sbjct: 717 AFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEP 759
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 258/543 (47%), Gaps = 46/543 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT---FYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
Y L + C + + + S ++T FY P ++ I Y KCG+ +A +FD
Sbjct: 52 YPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDP--YITTSLINFYFKCGSFGNAVKVFD 109
Query: 102 EMPE-----RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
++PE +D WN+++ Y + G + F M GV + Y+ + A +
Sbjct: 110 KLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPD--AYSLCILLGASD 167
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVI 215
LG +KQ+HG V++ F G+ LES L+ Y C DA R+F ++++K N V+WNV+
Sbjct: 168 GHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVM 227
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ + G + ++ ++ E+++ ++ +F + L AC GMQ+H ++K+ F
Sbjct: 228 IGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGF 287
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D V SL MY KC +EDA + DQ + W +++S Y +GR + +++ +
Sbjct: 288 ENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQ 347
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M + D +T +L+ C + G
Sbjct: 348 MKVLQIPP-------------------------------DSLTATNVLSSCCLVGSYDFG 376
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ +H + + SN+ + +ALL MY KCGN A F + + RD V+W ++++G+ +
Sbjct: 377 RLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTI-KGRDVVAWGSMISGFCQ 435
Query: 456 RGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+ EA+ ++ M + +P ++++AC + ++ G IH I++ E +V
Sbjct: 436 NRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFV 495
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+LV++Y+K + + VF + +++ NS+I +C N ++ +F M + G+
Sbjct: 496 ASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGL 555
Query: 575 KPD 577
PD
Sbjct: 556 FPD 558
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 240/536 (44%), Gaps = 48/536 (8%)
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDA 197
++A + TY ++L++ L K +H I+ +GF + + +SL++ Y KC +A
Sbjct: 45 LNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNA 104
Query: 198 RRMFD-----DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++FD ++ ++ WN IV Y G+ KE + F +M +RP ++ L
Sbjct: 105 VKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLG 164
Query: 253 ACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERN 309
A S + G QIHG ++ F GD + L MY CGR DA L + D+ N
Sbjct: 165 A----SDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGN 220
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+++W N M+ G+ + LW+ +L+ L +
Sbjct: 221 VVAW-------------------------------NVMIGGFGENGLWENSLEVYLLAKN 249
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
+ + L+ C + G +VH + + + ++ +V +LL MY KC +
Sbjct: 250 ENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVED 309
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACA 488
A F Q+S ++ ++ WNA+++ Y G+S + + + +M+ + P T +L++C
Sbjct: 310 AENVFDQVSVKKTEL-WNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCC 368
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ S + G+ IH +++ + NV + AL+ +Y+KC + A +F DV+ S
Sbjct: 369 LVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGS 428
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
MI GFC N + EALE + M G KPD ++ AC NV L + K
Sbjct: 429 MISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCT-IHGLAIKS 487
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
G+ + ++ +Y ++ + K + + MP V I CR NG L
Sbjct: 488 GLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCR-NGLPDL 542
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 160/352 (45%), Gaps = 33/352 (9%)
Query: 242 PLN---FTFANALFACSFLSSPYEGMQIHGVII-KIDFEGDDVVLGSLTEMYVKCGRLED 297
PLN FT+ + L AC FLS+ G IH II K F D + SL Y KCG +
Sbjct: 44 PLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGN 103
Query: 298 ARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLW 357
A + D+ E +E+ ++V WN+++ GY R
Sbjct: 104 AVKVFDKLPE--------------------------SEVSGQDVTFWNSIVNGYFRFGHK 137
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
KE + M+ D +L ++L G + K++HG+ R + + F+ + L
Sbjct: 138 KEGIAQFCRMQLFGVRPDAYSLCILLGASDG--HLGYAKQIHGYSVRKVFYGDPFLESGL 195
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPS 476
+ MY CG A F ++ + + V+WN ++ G+ G E ++ + + E +
Sbjct: 196 IYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLV 255
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+F + L+AC + G Q+HC +++ +E + +L+ +Y+KC +E A VF
Sbjct: 256 SASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFD 315
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ S + N+MI + N R + L+++ MK I PD +T +L +C
Sbjct: 316 QVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSC 367
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVI-RNCYEINV 512
++GQ +A+ +S ++FT+ +LL AC +S+L+ GK IH +I + + +
Sbjct: 28 VQQGQYVDALQFYSRN--PLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDP 85
Query: 513 VCRGALVEVYTKCCCLEYAIRVF-----KESSSLDVIICNSMILGFCHNERGREALEVFG 567
+L+ Y KC A++VF E S DV NS++ G+ +E + F
Sbjct: 86 YITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFC 145
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD-SMRCKYGIIPQLEHYECMIKLYCR 626
M+ G++PD + +L A +G++ A Q S+R + P LE +I +Y
Sbjct: 146 RMQLFGVRPDAYSLCILLGA--SDGHLGYAKQIHGYSVRKVFYGDPFLE--SGLIYMYFS 201
Query: 627 YG-------YMKELEDFVNRMPFNPTV 646
G KELED N + +N +
Sbjct: 202 CGRPLDAWRLFKELEDKGNVVAWNVMI 228
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 254/514 (49%), Gaps = 67/514 (13%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACS 255
A ++F+ +Q+ + +NV+V+ Y G ++ V++ F+ LRED + P FT+ L A
Sbjct: 196 AEKIFNYVQDPSLFVYNVMVKMYAKRGILRK-VLLLFQQLREDGLWPDGFTYPFVLKAIG 254
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L +G ++ G I+K + D+ V SL +MY + +E+A+ L D+ R+ +SW
Sbjct: 255 CLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNV 314
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++SGY R +A F EM + + D
Sbjct: 315 MISGYVRCRRFEDAINTFREMQQEG------------------------------NEKPD 344
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T+ L+ C L +++G E+H ++ R + + NALLDMY KCG L AR F
Sbjct: 345 EATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFD 403
Query: 436 QMSQR------------------------------RDKVSWNAVLTGYARRGQSEEAMTS 465
+MS + RD V W A++ GY + ++A+
Sbjct: 404 EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVAL 463
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ + +P KFT TLL CA + +LEQGK IH ++ N ++VV AL+E+Y+K
Sbjct: 464 FREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSK 523
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C C++ ++ +F E D S+I G N + EAL +F M++ G KPD ITF G+
Sbjct: 524 CGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGV 583
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V+ +FF+SM+ + I P++EHY C+I L R G + E E+ + +P
Sbjct: 584 LSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIEN 643
Query: 645 ---TVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
VP+ + CR + +GE A++L +
Sbjct: 644 CEIVVPLYGALLSACRIHNNVDMGERLAKKLENI 677
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 230/410 (56%), Gaps = 4/410 (0%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
GNL A +F+ + + +N M+ Y + G + L LF + G+ + TY VL
Sbjct: 191 GNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 250
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ ++ +++ G IVK G + + +SL+D Y + + +A+++FD++ +++V
Sbjct: 251 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 310
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SWNV++ Y+ ++A+ F +M +E + +P T + L AC+ L + G +IH
Sbjct: 311 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 370
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ K + + +L +MY KCG L AR + D+ +N+I WTS++SGY G +REA
Sbjct: 371 VRK-ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREA 429
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R+LF++ P R+V+ W AM+ GY + + +A+ M+ D+ T+ +L CA L
Sbjct: 430 RDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQL 489
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++ GK +HG++ N + ++ V AL++MY KCG + + FY++ + +D SW ++
Sbjct: 490 GALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYEL-EDKDTASWTSI 548
Query: 450 LTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
+ G A G++ EA+ FSEM+ +P TF +L+AC++ +E+G++
Sbjct: 549 ICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRR 598
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 39/332 (11%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
++ N I+ Y + N+++A+ LFDEM RD SWN M+ Y + + F +M
Sbjct: 279 YVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQE 338
Query: 138 G-VSANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMT 195
G ++ T + L + L + ++H + K GF + +++L+D Y KC +
Sbjct: 339 GNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--DNALLDMYAKCGCLN 396
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA--------------------------- 228
AR +FD++ KN + W ++ Y+ G+ +EA
Sbjct: 397 IARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHH 456
Query: 229 ----VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
V +F +M + ++P FT L C+ L + +G IHG + + D VV +
Sbjct: 457 FDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 516
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM----PERN 340
L EMY KCG ++ + + + ++++ SWTSI+ G A++G+ EA LF+EM + +
Sbjct: 517 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPD 576
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
I++ +L+ + L +E F M+K +
Sbjct: 577 DITFIGVLSACSHGGLVEEGRRFFNSMKKVHR 608
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y CG+L +AR LFD+ P RD W AM+ Y Q + LF +M V ++
Sbjct: 417 ISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDK 476
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T +L A+ L K +HG + + +V++ ++L++ Y KC + + +F +
Sbjct: 477 FTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYE 536
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+++K+ SW I+ + G EA+ +F +M R +P + TF L ACS EG
Sbjct: 537 LEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEG 596
Query: 264 MQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ + K+ E G + ++ + G L++A L+ +
Sbjct: 597 RRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQE 638
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L CA A+ + + + L T V + IE Y KCG +D + +F E+ ++D
Sbjct: 482 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 541
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW +++ NG L LF +M G + IT+ VL + + HG
Sbjct: 542 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS-----------HG 590
Query: 168 LIVKRG 173
+V+ G
Sbjct: 591 GLVEEG 596
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/612 (27%), Positives = 294/612 (48%), Gaps = 34/612 (5%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I +G GN+D A +F+++ ERD SWN+++ AY QNG + +F M
Sbjct: 300 NSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDE 359
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N T + +L + + +HGL+VK GF V + ++L+ Y +A +
Sbjct: 360 VNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLV 419
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + K+ +SWN ++ ++ G +A+ + M+R TF +AL AC
Sbjct: 420 FKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFF 479
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
+G +HG+++ GL D N I ++VS Y
Sbjct: 480 DKGRILHGLVV--------------------------VSGLFD-----NQIIGNALVSMY 508
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
G + +R + +MP R+V++WNA++ GY + +AL +R + +T+
Sbjct: 509 GKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVV 568
Query: 381 LILNVCAGLSEI-KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+L+ C ++ + GK +H +I + S+ V N+L+ MY KCG+L S++ F +
Sbjct: 569 SVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 628
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
R ++WNA+L A G EE + S+M+ + +F+F L+A A ++ LE+G+Q
Sbjct: 629 R-SIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQ 687
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
+H ++ +E++ A ++Y+KC + +++ S + + N +I +
Sbjct: 688 LHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 747
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
E E F M + GIKP H+TF +L AC H G V L ++D + +G+ P +EH
Sbjct: 748 FEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCI 807
Query: 619 CMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
C+I L R G + E E F+++MP P + R + C+ + G AA L++L P
Sbjct: 808 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPE 867
Query: 679 APFQFKITTNRF 690
F +++N F
Sbjct: 868 DDSVFVLSSNMF 879
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 261/566 (46%), Gaps = 38/566 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V N I Y K G + AR LFD+MP R+ SWN M+ + G +E F M
Sbjct: 93 VLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCD 152
Query: 137 SGVSANQITYANVLRS---SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
G+ + A+++ + S GV Q+HG + K G +V + ++++ YG +
Sbjct: 153 LGIKPSSFVIASLVTACGRSGSMFREGV--QVHGFVAKSGLLSDVYVSTAILHLYGVYGL 210
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
++ +R++F+++ ++N VSW ++ Y G +E + ++ M E + + + + +
Sbjct: 211 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISS 270
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C L G QI G +IK E V SL M+ G ++ A + +Q ER+ ISW
Sbjct: 271 CGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISW 330
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
SIV+ YA +G I E+ +FN LMR+ +
Sbjct: 331 NSIVAAYAQNGHIEESSRIFN-------------------------------LMRRFHDE 359
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
++ T+ +L+V + K G+ +HG + + + S + V N LL MY G A +
Sbjct: 360 VNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLV 419
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISS 492
F QM +D +SWN+++ + G+S +A+ M + + TF + LAAC +
Sbjct: 420 FKQMPT-KDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF 478
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
++G+ +H V+ + N + ALV +Y K + + RV + DV+ N++I G
Sbjct: 479 FDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGG 538
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ NE +AL F ++ EG+ ++IT +L AC+ G++ + + G
Sbjct: 539 YAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFES 598
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVN 638
+I +Y + G + +D N
Sbjct: 599 DEHVKNSLITMYAKCGDLSSSQDLFN 624
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 240/487 (49%), Gaps = 47/487 (9%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+ LH L VK +V+ ++L++ Y K + AR +FD + +N VSWN ++ +
Sbjct: 78 RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRV 137
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY-EGMQIHGVIIKIDFEGDDVV 281
G E + F KM I+P +F A+ + AC S + EG+Q+HG + K
Sbjct: 138 GLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS-------- 189
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
G L+++YV T+I+ Y + G + +R++F EMP+RNV
Sbjct: 190 -GLLSDVYVS----------------------TAILHLYGVYGLVSCSRKVFEEMPDRNV 226
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SW +++ GY+ +E +D MR + ++ ++ L+++ C L + +G+++ G
Sbjct: 227 VSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQ 286
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ S + V N+L+ M+ GN+ A F Q+S+ RD +SWN+++ YA+ G EE
Sbjct: 287 VIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISE-RDTISWNSIVAAYAQNGHIEE 345
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ F+ M ++ + T TLL+ ++ + G+ IH V++ ++ V L+
Sbjct: 346 SSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 405
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y E A VFK+ + D+I NS++ F ++ R +AL + M + G +++T
Sbjct: 406 MYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVT 465
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE------CMIKLYCRYGYMKELE 634
F L AC + +FFD R +G++ ++ ++ +Y + G M
Sbjct: 466 FTSALAAC-------FSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSR 518
Query: 635 DFVNRMP 641
+ +MP
Sbjct: 519 RVLLQMP 525
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 192/422 (45%), Gaps = 34/422 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + N + Y G ++A +F +MP +D SWN+++ ++ +G L + M
Sbjct: 397 VCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIR 456
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+G S N +T+ + L + + LHGL+V G N I+ ++LV YGK M+
Sbjct: 457 TGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMST 516
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
+RR+ + ++ V+WN ++ Y + +A+ F + E + T + L AC
Sbjct: 517 SRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLV 576
Query: 257 LSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
E G +H I+ FE D+ V SL MY KCG L ++ L + D R+II+W +
Sbjct: 577 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNA 636
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
I++ A G +E L V MR +D
Sbjct: 637 ILAANAHHGH-------------------------------GEEVLKLVSKMRSFGLSLD 665
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
Q + L+ A L+ ++ G+++HG + + + F+ NA DMY KCG + +
Sbjct: 666 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEV-VKML 724
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
S R SWN +++ R G EE +F EM + +P TF +LL AC++ ++
Sbjct: 725 PPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 784
Query: 495 QG 496
QG
Sbjct: 785 QG 786
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 129/319 (40%), Gaps = 50/319 (15%)
Query: 51 LCASSKAIV--EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
L A++K V E ++L V F+ N A + Y KCG + + + R
Sbjct: 673 LSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 732
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SWN ++ A ++G+ E F +M G+ +T+ ++L + + HG
Sbjct: 733 PSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS-----------HGG 781
Query: 169 IVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+V +G + + + L A C+ + D ++ R +G
Sbjct: 782 LVDQGLAYYDMIAKDFGLEPAIEHCICVID------------------LLGR---SGRLA 820
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
EA KM ++P + + + L +C G + + K++ E D V + S +
Sbjct: 821 EAETFISKM---PMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLS-S 876
Query: 287 EMYVKCGRLEDARGLLDQPDERNI-----ISWTSI---VSGYAISGRIR-EARELFNEMP 337
M+ GR ED + Q +NI SW + VS + I R + E++ ++
Sbjct: 877 NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLE 936
Query: 338 E-RNVISWNAMLAGYTRSL 355
+ + +I + +A +++L
Sbjct: 937 DIKKLIKESGYVADTSQAL 955
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 62/154 (40%)
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+ I+ G+ +H ++ ++V+ L+ +YTK ++ A +F + + + N
Sbjct: 69 SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+M+ G E +E F M GIKP ++ AC G++ K
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
G++ + ++ LY YG + MP
Sbjct: 189 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 222
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 294/603 (48%), Gaps = 67/603 (11%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGS----WNAMLGAYTQNGFPGRTLELFLDMNH 136
++ +EC + L +AR + DEMP R W ++L +++NGF LF M
Sbjct: 46 SQILECLSQ-QRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPE 104
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
N +TY +L + L + + + +R NV+ +SL+ + +
Sbjct: 105 R----NVVTYNAMLSGYVQCGRLSDACRFFEEMPER----NVVSWTSLLCGLANAGRIGE 156
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +F+ + +N VSWN ++ + +G +EA +F +M + N A
Sbjct: 157 ARELFNVMPERNVVSWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNVMIAG------- 209
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
Y + R+E+AR L D +RN+++WTS+
Sbjct: 210 --------------------------------YAEHSRMEEARVLFDGMGDRNVVTWTSM 237
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SGY +G ++E LF +MPERNV+SW AM+ G+ + +KEAL+ M T+ +
Sbjct: 238 ISGYCRAGNVQEGYCLFQKMPERNVVSWTAMIGGFAWNGFYKEALNS---MSYNTQSCNS 294
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ G I + +++ + + I D S ++++ Y G + A F
Sbjct: 295 MINGYIR-----IGQLEKAQSLFDTIPVRDKIS----WTSMINGYFNVGQIAKACYLFNN 345
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M R D V+W +++G+ + EA FSEM+ + P TF LL A ++ L+Q
Sbjct: 346 MPDR-DAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQ 404
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+Q HC +++ +E +++ + +L+ +Y KC + A +F + S D+I NSMI+GF H
Sbjct: 405 GRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSKMISRDLISWNSMIMGFSH 464
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ EAL+VF M G P+ +TF GIL AC H G + + FD+M + I PQLE
Sbjct: 465 HGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQGWELFDAMSDVFAIQPQLE 524
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT-LGEWAARRLNE 674
HY CM+ L R G ++E E+F++++PF P + + + C T + AA+RL E
Sbjct: 525 HYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALLGVCGFGMINTGVARRAAKRLLE 584
Query: 675 LNP 677
L+P
Sbjct: 585 LDP 587
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 216/449 (48%), Gaps = 38/449 (8%)
Query: 58 IVEARKL-----ESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
I EAR L E N+VT+ N + Y +CG L DA F+EMPER+ SW
Sbjct: 92 IDEARALFEIMPERNVVTY---------NAMLSGYVQCGRLSDACRFFEEMPERNVVSWT 142
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
++L G G ELF M V + ++RS E + + + VK
Sbjct: 143 SLLCGLANAGRIGEARELFNVMPERNVVSWNSMLVGLIRSGQLE---EARRVFNEMPVKS 199
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
NV ++ Y + M +AR +FD + ++N V+W ++ Y AGN +E +F
Sbjct: 200 QVSWNV-----MIAGYAEHSRMEEARVLFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLF 254
Query: 233 FKMLREDIRPLNFTFANALFACS-FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
KM ++ +++T FA + F M + S+ Y++
Sbjct: 255 QKMPERNV--VSWTAMIGGFAWNGFYKEALNSMSY-----------NTQSCNSMINGYIR 301
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
G+LE A+ L D R+ ISWTS+++GY G+I +A LFN MP+R+ ++W M++G+
Sbjct: 302 IGQLEKAQSLFDTIPVRDKISWTSMINGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGH 361
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
++ L+ EA MR T ++L ++ + G++ H + + + ++
Sbjct: 362 VQNELFAEATYLFSEMRVKGVSPLNSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDL 421
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
+ N+L+ MY KCG + A F +M RD +SWN+++ G++ G + EA+ F M
Sbjct: 422 ILQNSLISMYAKCGEIGDAYSIFSKMIS-RDLISWNSMIMGFSHHGLTSEALKVFEAMLT 480
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQI 499
T P+ TF +L+AC++ L QG ++
Sbjct: 481 SGTHPNSVTFLGILSACSHAGLLNQGWEL 509
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y G + A LF+ MP+RD +W M+ + QN LF +M GVS
Sbjct: 327 INGYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLN 386
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T++ +L ++ L +Q H L++K F ++IL++SL+ Y KC + DA +F
Sbjct: 387 STFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFSK 446
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +++ +SWN ++ + G EA+ +F ML P + TF L ACS +G
Sbjct: 447 MISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGLLNQG 506
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYV-------KCGRLEDARGLLDQ-PDERNIISWTS 315
++ D D + E YV + G++E+A + + P E ++ W +
Sbjct: 507 WEL------FDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGA 560
Query: 316 I--VSGYAI--SGRIREARELFNEMPERN 340
+ V G+ + +G R A + E+ N
Sbjct: 561 LLGVCGFGMINTGVARRAAKRLLELDPLN 589
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 274/557 (49%), Gaps = 47/557 (8%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
A++LR+SA+ L QLHG + K GF + +L ++L+D Y KC + A +F +++
Sbjct: 221 ADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRD 280
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N VSW ++ +L G+ + + +M + P +T + +L AC G+
Sbjct: 281 RNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVG 340
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IHG+ ++ +E VV SL +Y K GR
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSK-------------------------------GGR 369
Query: 326 IREARELFN-EMPERNVISWNAMLAGYTRSLLWKEALDFVF-------LMRKTTKDIDQV 377
I +AR +F+ R + +WNAM++GY + ++AL VF + D+
Sbjct: 370 IGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDAL-LVFREMRRRRRRHEDQHQPDEF 428
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYS--SNIFVSNALLDMYRKCGNLRSARIWFY 435
T +L C GL + G +VH + + +S SN ++ AL+DMY KCG L A F
Sbjct: 429 TFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFE 488
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSL 493
++ +R++ + W V+ G+A+ GQ EA+ F W + R +++ A+ + +
Sbjct: 489 RL-ERKNAIQWTTVVVGHAQEGQVMEALELFRRF-WRSGARADAHVLSSIVGVLADFALV 546
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
EQG+Q+HC+ +++ +V ++V++Y KC + A R+F+E + +V+ +MI G
Sbjct: 547 EQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGL 606
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ GREA+ +F M+ G++PD +T+ +L AC H G V ++F +R + P+
Sbjct: 607 GKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPK 666
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY CM+ L R G ++E D + MP PTV + + + CR + +G A L
Sbjct: 667 AEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLL 726
Query: 674 ELNPWAPFQFKITTNRF 690
++ P + +N F
Sbjct: 727 AIDGDNPVNYVTLSNVF 743
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 231/474 (48%), Gaps = 43/474 (9%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ A L + A ++ +L L L N I+ Y KCG LD A +F M
Sbjct: 219 MIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGM 278
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVS 162
+R+ SW A++ + Q+G L L +M + +A N+ T + L++ ++G
Sbjct: 279 RDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAG 338
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLV 221
+HGL V+ G+ + ++ SSLV Y K + DARR+FD + +WN ++ Y
Sbjct: 339 VGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAH 398
Query: 222 AGNGKEAVVMFFKML------REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
AG+G++A+++F +M + +P FTFA+ L AC L +P EG Q+H + F
Sbjct: 399 AGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGF 458
Query: 276 E--GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ ++ G+L +MYVKCGRL A + ++ + +N I WT++V G+A G++ EA ELF
Sbjct: 459 STASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELF 518
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
W ++ D L I+ V A + ++
Sbjct: 519 RR--------------------FW-----------RSGARADAHVLSSIVGVLADFALVE 547
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G++VH + ++ +++ N+++DMY KCG A F ++ R+ VSW ++ G
Sbjct: 548 QGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPA-RNVVSWTTMINGL 606
Query: 454 ARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+ G EA+ F EM+ P + T+ LL+AC++ +++ ++ + R+
Sbjct: 607 GKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRD 660
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 163/390 (41%), Gaps = 29/390 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKC 90
H +P ++ +A L + C A E ++ + + F L ++ Y KC
Sbjct: 419 HEDQHQPDEFT-FASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKC 477
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G L A +F+ + ++ W ++ + Q G LELF SG A+ ++++
Sbjct: 478 GRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIV 537
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
A+ + +Q+H VK +V +S+VD Y KC + +A RMF +I +N V
Sbjct: 538 GVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVV 597
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW ++ G G+EAV MF +M + P T+ L ACS E + I
Sbjct: 598 SWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCI 657
Query: 271 IKIDFEGDDVV------LGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAIS 323
+ D V + ++ + G L +AR L+ P E + W +++S +
Sbjct: 658 RR-----DRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVH 712
Query: 324 GRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ REA ++ + N +++ + + + W+E MR+
Sbjct: 713 KDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRG--------- 763
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
L G S +++GKEVH F D ++
Sbjct: 764 --LKKQGGCSWVEIGKEVHFFYGGGDEEAH 791
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 281/570 (49%), Gaps = 63/570 (11%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG----- 223
IVK ++++ + ++ AY + + AR +FD++ +N VSW+ ++ + G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 224 ------------------------NGK--EAVVMFFKMLREDIRPLNFTFANALFACSFL 257
NG EA+ +FF++L +RP + TF + + AC L
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
GM I G+++K FE V SL + ++ G ++ AR + D+ ++R+++SWT+I+
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
Y +G +REAR +F+EMPERN ISW+AM+A Y++S +EAL M + +
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF--- 434
L+ A L + G +HG + + ++F+ ++L+D+Y KCG R+ F
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 435 --------------YQMSQR-------------RDKVSWNAVLTGYARRGQSEEAMTSFS 467
Y ++ R ++ VSW ++ GY Q E+ + F+
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFN 437
Query: 468 EMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+ + P+K TF ++L ACA+I+SL++G +H +I+ + ++ AL ++Y KC
Sbjct: 438 TLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGIL 585
+ + +VF+ + I MI G + E+L +F M++ + P+ + +L
Sbjct: 498 DIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V L +F+SM YGI P+ +HY C++ L R G + E E+F+ +PF P
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ C+K + E A++L +L
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQL 647
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 265/528 (50%), Gaps = 76/528 (14%)
Query: 44 LYAHLFQLCASSKAIVEARKLE-----------SNLVTFYPTPPVFLLNRAIECYGKCGN 92
L+AHL + SS+ + + L +V + + + N I Y + GN
Sbjct: 43 LHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGN 102
Query: 93 LDDARGLFDEMPERDGGSWNAMLGA-------------------------------YTQN 121
L AR LFDEMPER+ SW+A++ + +N
Sbjct: 103 LVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF------- 174
G L+LF + SGV N +T+ +V+R+ E + G+ + GL+VK GF
Sbjct: 163 GLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVS 222
Query: 175 ------------------------CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+V+ ++++DAY + + +ARR+FD++ +N +
Sbjct: 223 NSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEI 282
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW+ ++ RY +G +EA+ +F KM++E +P FA L A + L + G+ IHG +
Sbjct: 283 SWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHV 342
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
KI + D + SL ++Y KCG+ +D R + D E+N++ W S+V GY+I+GR+ E
Sbjct: 343 TKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETE 402
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
ELF +PE+N +SW ++AGY + ++ L+ + + + ++ T +L CA ++
Sbjct: 403 ELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G VHG I + +IFV AL DMY KCG++ S++ F +M + ++++SW ++
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPE-KNEISWTVMI 521
Query: 451 TGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQG 496
G A G + E++ F EM+ E P++ ++L AC++ +++G
Sbjct: 522 QGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKG 569
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 195/474 (41%), Gaps = 96/474 (20%)
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+G +H +IK F + L +Y+ C + + ++ + D +++ ++S Y
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 322 ISGRIREARELFNEMPER-------------------------------NVISWNAMLAG 350
G + +AR LF+EMPER NV+SW A ++G
Sbjct: 99 QWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG 158
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ R+ L EAL F + ++ + VT ++ C L + +G + G + + +
Sbjct: 159 FVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHY 218
Query: 411 IFVSN-------------------------------ALLDMYRKCGNLRSARIWFYQMSQ 439
+ VSN A+LD Y + G+LR AR F +M +
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R+++SW+A++ Y++ G +EEA+ FS+M E +P+ F L+A A++ +L G
Sbjct: 279 -RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM--------- 549
IH V + + +V +L+++Y KC + VF +V+ NSM
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 550 ----------------------ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
I G+ NE+ + LEVF + G P+ TF +L A
Sbjct: 398 LEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
C ++ + + K GI + + +Y + G + + RMP
Sbjct: 458 CASIASLDKGMNVHGKI-IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP 510
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 149/341 (43%), Gaps = 63/341 (18%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A AS +A+ + ++ VF+ + I+ Y KCG DD R +FD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 103 MPERDGGSWNAMLGAYTQNG-----------FPGR--------------------TLELF 131
+ E++ WN+M+G Y+ NG P + LE+F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ SG + N+ T+++VL + A L +HG I+K G ++ + ++L D Y KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANA 250
+ ++++F+ + KN +SW V+++ +G E++++F +M R ++ P +
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
LFACS +G+ +E G+ +P ++
Sbjct: 557 LFACSHCGLVDKGLWYF-------------------------NSMEKVYGI--KPKGKH- 588
Query: 311 ISWTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLAG 350
+T +V + SGR+ EA E +P + +W A+L+G
Sbjct: 589 --YTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S + + S ++ + CAS ++ + + ++ +F+ + Y KCG++
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVL 150
++ +F+ MPE++ SW M+ ++GF +L LF +M S V+ N++ +VL
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 257/499 (51%), Gaps = 31/499 (6%)
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
++ A ++FD + +N V+W +++ R+ G ++A+ +F M P FT+++ L
Sbjct: 4 VIWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 63
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
AC+ L G Q+H +I++ D V SL +MY KC
Sbjct: 64 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC------------------- 104
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKT 370
A G + ++R++F +MPE NV+SW A++ Y +S KEA++ M
Sbjct: 105 ---------AADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISG 155
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
+ + +L C LS+ G++V+ + + +S V N+L+ MY + G + A
Sbjct: 156 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 215
Query: 431 RIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACAN 489
R F + ++ + VS+NA++ GYA+ +SEEA F+E+ S FTF +LL+ A+
Sbjct: 216 RKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 274
Query: 490 ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM 549
I ++ +G+QIH +++ Y+ N AL+ +Y++C +E A +VF E +VI SM
Sbjct: 275 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSM 334
Query: 550 ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYG 609
I GF + ALE+F M + G KP+ IT+ +L AC H G + + F+SM ++G
Sbjct: 335 ITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 394
Query: 610 IIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
I+P++EHY CM+ L R G + E +F+N MP + R + CR +G LG AA
Sbjct: 395 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 454
Query: 670 RRLNELNPWAPFQFKITTN 688
+ E P P + + +N
Sbjct: 455 EMILEQEPDDPAAYILLSN 473
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 223/408 (54%), Gaps = 37/408 (9%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +FD+MPER+ +W M+ + Q G ++LFLDM SG ++ TY++VL + E
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV---MTDARRMFDDIQNKNAVSW 212
L + KQLH +++ G +V + SLVD Y KC + D+R++F+ + N +SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 213 NVIVRRYLVAGN-GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
I+ Y +G KEA+ +F KM+ IRP +F+F++ L AC LS PY G Q++ +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K+ + V SL MY + GR+EDAR D E+N++S+ +IV GYA + + EA
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LFNE+ + + I T +L+ A +
Sbjct: 249 LFNEIADTGI-------------------------------GISAFTFASLLSGAASIGA 277
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+++HG + + Y SN + NAL+ MY +CGN+ +A F +M + R+ +SW +++T
Sbjct: 278 MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMIT 336
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
G+A+ G + A+ F +M + T+P++ T+ +L+AC+++ + +G++
Sbjct: 337 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 384
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 209/452 (46%), Gaps = 49/452 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC---GNLDDARGLFD 101
Y+ + C + ++L S ++ V + ++ Y KC G++DD+R +F+
Sbjct: 59 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 118
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+MPE + SW A++ AY Q+G + +ELF M + N ++++VL++ +
Sbjct: 119 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 178
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+Q++ VK G + +SL+ Y + M DAR+ FD + KN VS+N IV Y
Sbjct: 179 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 238
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+EA ++F ++ I FTFA+ L + + + +G QIHG ++K ++ +
Sbjct: 239 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 298
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +L MY +CG +E A + ++ ++RN+ISWTS+++G+A G A E+F++M E
Sbjct: 299 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE-- 356
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK---- 396
T +++T +L+ C+ + I G+
Sbjct: 357 -----------------------------TGTKPNEITYVAVLSACSHVGMISEGQKHFN 387
Query: 397 ---EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ HG + R ++ + ++D+ + G L A + M D + W +L
Sbjct: 388 SMYKEHGIVPRMEHYA------CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 441
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
G +E + +EM E P LL+
Sbjct: 442 RVHGNTELGRHA-AEMILEQEPDDPAAYILLS 472
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 179/385 (46%), Gaps = 32/385 (8%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K ISGH++ P +S ++ + + C + ++ S V + N I Y
Sbjct: 151 KMISGHIR---PNHFS-FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 206
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
+ G ++DAR FD + E++ S+NA++ Y +N LF ++ +G+ + T+A
Sbjct: 207 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 266
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L +A +G +Q+HG ++K G+ N + ++L+ Y +C + A ++F++++++
Sbjct: 267 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 326
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI- 266
N +SW ++ + G A+ MF KML +P T+ L ACS + EG +
Sbjct: 327 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 386
Query: 267 ------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
HG++ +++ + ++ + G L +A ++ P + + W +++
Sbjct: 387 NSMYKEHGIVPRMEH------YACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 440
Query: 320 YAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ G R A E+ E + ++ + + + WK+ V +RK+ K+ +
Sbjct: 441 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD----VVKIRKSMKERNL 496
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGF 401
+ AG S I++ VH F
Sbjct: 497 IKE-------AGCSWIEVENRVHRF 514
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 182/665 (27%), Positives = 321/665 (48%), Gaps = 54/665 (8%)
Query: 22 PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLN 81
P+K + G + S +P S S + + +I +AR + ++ +F+
Sbjct: 123 PNKLTIIAVLGAIASGDPSSSSS--------SRAPSIAQARIVHDDIRGSDLERDLFVAT 174
Query: 82 RAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVS 140
++ YGKCG ++ A +F + D WNA + A N P R L L M G+
Sbjct: 175 ALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLL 234
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N+ ++ +L S + L +++ +H + + GF G+V++ ++LV YG+C + ++ +
Sbjct: 235 PNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAV 294
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL-FACSFLSS 259
F+ + +N VSWN ++ + G+ A ++++M +E RP TF AL ACS S
Sbjct: 295 FEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQ 354
Query: 260 PY-EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
E +HG I EGD V++G T++V+
Sbjct: 355 DLGESAALHGWIACAGLEGD-VMVG------------------------------TALVT 383
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
Y +G I AR F+ +P +N++SWNAML Y + +EA++ M++ + ++V+
Sbjct: 384 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVS 443
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
+L C +SE + +H + N ++ ++N ++ M+ + G+L A + +
Sbjct: 444 YLAVLGCCEDVSE---ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA-VAAFDA 499
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
+ +D VSWN + + R A+T+F MQ E RP KFT +++ CA++ +LE G
Sbjct: 500 TVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELG 559
Query: 497 KQIHCFVIRNC-YEINVVCRGALVEVYTKC-CCLEYAIRVFKE--SSSLDVIICNSMILG 552
+ I + E +VV A++ + KC ++ R+F D++ N+MI
Sbjct: 560 RSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA 619
Query: 553 FCHNERGREALEVFGLMK-KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+ + GR+AL++F +M+ + ++PD TF +L C H G V+ + F R GI
Sbjct: 620 YAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIE 679
Query: 612 PQ-LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
Q +EHY C++ + R GY++E EDF+ +MP + + C G GE AAR
Sbjct: 680 QQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAAR 739
Query: 671 RLNEL 675
EL
Sbjct: 740 AFIEL 744
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/624 (22%), Positives = 259/624 (41%), Gaps = 57/624 (9%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+ + A L + C + + R+L +V L N ++ Y KC +LDDA
Sbjct: 19 DDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDA 78
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN---HSGVSANQITYANVLRSS 153
F + R +WN ++ A + P +L+ M + N++T VL +
Sbjct: 79 NAAFSALRSRGIATWNTLIAAQSS---PAAVFDLYTRMKLEERAENRPNKLTIIAVLGAI 135
Query: 154 AE----------ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
A + ++ +H I ++ + ++L+DAYGKC + A +F
Sbjct: 136 ASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSR 195
Query: 204 IQNKNAVSWNVIVRRYLVAGNGK---EAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
IQ + + WN + AGN + A+++ +M E + P +F L +C SS
Sbjct: 196 IQVPDLICWNAAI--MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSL 253
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
IH + ++ F GD VV +L MY +CG ++++ + + RN +SW ++++ +
Sbjct: 254 PLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAF 313
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
A G A ++ W G+ + FV ++ Q
Sbjct: 314 AQCGHRSAAFAIY----------WRMQQEGFR-----PNKITFVTALKAACSSSSQ---- 354
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
++ +HG+I ++ V AL+ MY G + AR F +
Sbjct: 355 ----------DLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA- 403
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQI 499
++ VSWNA+LT Y G++ EAM F+ M+ ++ P+K ++ +L C ++S + + I
Sbjct: 404 KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSI 460
Query: 500 HCFVIRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
H V+ N + +V ++ + LE A+ F + D + N+ + E
Sbjct: 461 HAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSARED 520
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
A+ F M+ EG +PD T ++ C G ++L + + +
Sbjct: 521 LHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVAS 580
Query: 619 CMIKLYCRYG-YMKELEDFVNRMP 641
++ + + G + E E RMP
Sbjct: 581 AVMNMVAKCGSSVDECERLFARMP 604
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 260/541 (48%), Gaps = 37/541 (6%)
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRM 200
+ + +L+S L + QLH + G N L + L Y C M A+ +
Sbjct: 21 DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD I KN+ WN ++R Y + A+ ++ KML +P NFT+ L AC L
Sbjct: 81 FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G ++H +++ E D V S+ MY K G +E
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVE------------------------ 176
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
AR +F+ M R++ SWN M++G+ ++ + A + MR+ D+ TL
Sbjct: 177 -------AARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLL 229
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNI---FVSNALLDMYRKCGNLRSARIWFYQM 437
+L+ C + ++K+GKE+HG++ RN S + F+ N+++DMY C ++ AR F +
Sbjct: 230 ALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGL 289
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQG 496
+ +D VSWN++++GY + G + +A+ F M P + T ++LAAC IS+L G
Sbjct: 290 -RVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLG 348
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+ +V++ Y +NVV AL+ +Y C L A RVF E ++ C M+ GF +
Sbjct: 349 ATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIH 408
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
RGREA+ +F M +G+ PD F +L AC H G V + F M Y + P+ H
Sbjct: 409 GRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTH 468
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
Y C++ L R GY+ E + M P + + CR + L +A++L ELN
Sbjct: 469 YSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELN 528
Query: 677 P 677
P
Sbjct: 529 P 529
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 226/487 (46%), Gaps = 51/487 (10%)
Query: 18 PKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTP-P 76
PKP+ + T G L Q +SK++ +A +L +++ T
Sbjct: 12 PKPSSTSTFDSLQCGTL--------------LQSLTNSKSLTQALQLHAHVTTGGTLRRN 57
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+L + CY CG++ A+ +FD++ ++ WN+M+ Y N P R L L+L M H
Sbjct: 58 TYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLH 117
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G + TY VL++ + L + +++H L+V G +V + +S++ Y K +
Sbjct: 118 FGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEA 177
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR +FD + ++ SWN ++ ++ G + A +F M R+ T L AC
Sbjct: 178 ARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGD 237
Query: 257 LSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
+ G +IHG +++ G + ++ S+ +MY C + AR L + ++++SW
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSW 297
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
S++SGY G +A ELF M +
Sbjct: 298 NSLISGYEKCGDAFQALELFGRMVVVGAVP------------------------------ 327
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+VT+ +L C +S +++G V ++ + Y N+ V AL+ MY CG+L A
Sbjct: 328 -DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRV 386
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F +M + ++ + ++TG+ G+ EA++ F EM + P + F +L+AC++
Sbjct: 387 FDEMPE-KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGL 445
Query: 493 LEQGKQI 499
+++GK+I
Sbjct: 446 VDEGKEI 452
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 180/356 (50%), Gaps = 8/356 (2%)
Query: 21 TPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL 80
+PS+ L + +P +++ Y + + C RK+ + +V V++
Sbjct: 104 SPSRALFLYLKMLHFGQKPDNFT-YPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y K G+++ AR +FD M RD SWN M+ + +NG E+F DM G
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV---ILESSLVDAYGKCMVMTDA 197
++ T +L + + ++L V K++HG +V+ G G V L +S++D Y C ++ A
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++F+ ++ K+ VSWN ++ Y G+ +A+ +F +M+ P T + L AC+ +
Sbjct: 283 RKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQI 342
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S+ G + ++K + + VV +L MY CG L A + D+ E+N+ + T +V
Sbjct: 343 SALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMV 402
Query: 318 SGYAISGRIREARELFNEMPERNVIS----WNAMLAGYTRSLLWKEALDFVFLMRK 369
+G+ I GR REA +F EM + V + A+L+ + S L E + + M +
Sbjct: 403 TGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTR 458
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 137/270 (50%), Gaps = 12/270 (4%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
FL+N I+ Y C ++ AR LF+ + +D SWN+++ Y + G + LELF M
Sbjct: 264 FLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVV 323
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G +++T +VL + + L + + +VKRG+ NV++ ++L+ Y C + A
Sbjct: 324 GAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCA 383
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R+FD++ KN + V+V + + G G+EA+ +F++ML + + P F L ACS
Sbjct: 384 CRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHS 443
Query: 258 SSPYEGMQI-HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNIIS 312
EG +I + + E L ++ + G L++A +++ +P+E
Sbjct: 444 GLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNED---V 500
Query: 313 WTSIVSGYAISGRIR----EARELFNEMPE 338
WT+++S + ++ A++LF P+
Sbjct: 501 WTALLSACRLHRNVKLAVISAQKLFELNPD 530
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 254/514 (49%), Gaps = 67/514 (13%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACS 255
A ++F+ +Q+ + +NV+V+ Y G ++ V++ F+ LRED + P FT+ L A
Sbjct: 150 AEKIFNYVQDPSLFVYNVMVKIYAKRGILRK-VLLLFQQLREDGLWPDGFTYPFVLKAIG 208
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L +G ++ G I+K + D+ V SL +MY + +E+A+ L D+ R+ +SW
Sbjct: 209 CLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNV 268
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++SGY R +A F EM + + D
Sbjct: 269 MISGYVRCRRFEDAINTFREMQQEG------------------------------NEKPD 298
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T+ L+ C L +++G E+H ++ R + + NALLDMY KCG L AR F
Sbjct: 299 EATVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFD 357
Query: 436 QMSQR------------------------------RDKVSWNAVLTGYARRGQSEEAMTS 465
+MS + RD V W A++ GY + ++A+
Sbjct: 358 EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVAL 417
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EMQ + +P KFT TLL CA + +LEQGK IH ++ N ++VV AL+E+Y+K
Sbjct: 418 FREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSK 477
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C C++ ++ +F E D S+I G N + EAL +F M++ G KPD ITF G+
Sbjct: 478 CGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGV 537
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G V+ +FF+SM+ + I P++EHY C+I L R G + E E+ + +P
Sbjct: 538 LSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIEN 597
Query: 645 ---TVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
VP+ + CR + +GE A++L +
Sbjct: 598 CEIVVPLYGALLSACRIHNNVDMGERLAKKLENI 631
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 230/410 (56%), Gaps = 4/410 (0%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
GNL A +F+ + + +N M+ Y + G + L LF + G+ + TY VL
Sbjct: 145 GNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 204
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ ++ +++ G IVK G + + +SL+D Y + + +A+++FD++ +++V
Sbjct: 205 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 264
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SWNV++ Y+ ++A+ F +M +E + +P T + L AC+ L + G +IH
Sbjct: 265 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 324
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ K + + +L +MY KCG L AR + D+ +N+I WTS++SGY G +REA
Sbjct: 325 VRK-ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREA 383
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R+LF++ P R+V+ W AM+ GY + + +A+ M+ D+ T+ +L CA L
Sbjct: 384 RDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQL 443
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
++ GK +HG++ N + ++ V AL++MY KCG + + FY++ + +D SW ++
Sbjct: 444 GALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYEL-EDKDTASWTSI 502
Query: 450 LTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
+ G A G++ EA+ FSEM+ +P TF +L+AC++ +E+G++
Sbjct: 503 ICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRR 552
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 157/332 (47%), Gaps = 39/332 (11%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
++ N I+ Y + N+++A+ LFDEM RD SWN M+ Y + + F +M
Sbjct: 233 YVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQE 292
Query: 138 G-VSANQITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMT 195
G ++ T + L + L + ++H + K GF + +++L+D Y KC +
Sbjct: 293 GNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--DNALLDMYAKCGCLN 350
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA--------------------------- 228
AR +FD++ KN + W ++ Y+ G+ +EA
Sbjct: 351 IARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHH 410
Query: 229 ----VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
V +F +M + I+P FT L C+ L + +G IHG + + D VV +
Sbjct: 411 FDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 470
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM----PERN 340
L EMY KCG ++ + + + ++++ SWTSI+ G A++G+ EA LF+EM + +
Sbjct: 471 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPD 530
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
I++ +L+ + L +E F M+K +
Sbjct: 531 DITFIGVLSACSHGGLVEEGRRFFNSMKKVHR 562
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I Y CG+L +AR LFD+ P RD W AM+ Y Q + LF +M + ++
Sbjct: 371 ISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDK 430
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T +L A+ L K +HG + + +V++ ++L++ Y KC + + +F +
Sbjct: 431 FTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYE 490
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+++K+ SW I+ + G EA+ +F +M R +P + TF L ACS EG
Sbjct: 491 LEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEG 550
Query: 264 MQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ + K+ E G + ++ + G L++A L+ +
Sbjct: 551 RRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQE 592
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L CA A+ + + + L T V + IE Y KCG +D + +F E+ ++D
Sbjct: 436 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 495
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW +++ NG L LF +M G + IT+ VL + + HG
Sbjct: 496 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS-----------HG 544
Query: 168 LIVKRG 173
+V+ G
Sbjct: 545 GLVEEG 550
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 255/494 (51%), Gaps = 31/494 (6%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A ++FD + +N V+W +++ R+ G ++A+ +F M P FT+++ L AC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G Q+H +I++ D V SL +MY KC
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC------------------------ 99
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDID 375
A G + ++R++F +MPE NV+SW A++ Y +S KEA++ M +
Sbjct: 100 ----AADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPN 155
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ +L C LS+ G++V+ + + +S V N+L+ MY + G + AR F
Sbjct: 156 HFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 215
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
+ ++ + VS+NA++ GYA+ +SEEA F+E+ S FTF +LL+ A+I ++
Sbjct: 216 ILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 274
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G+QIH +++ Y+ N AL+ +Y++C +E A +VF E +VI SMI GF
Sbjct: 275 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 334
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ ALE+F M + G KP+ IT+ +L AC H G + + F+SM ++GI+P++
Sbjct: 335 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 394
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
EHY CM+ L R G + E +F+N MP + R + CR +G LG AA + E
Sbjct: 395 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 454
Query: 675 LNPWAPFQFKITTN 688
P P + + +N
Sbjct: 455 QEPDDPAAYILLSN 468
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 223/408 (54%), Gaps = 37/408 (9%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +FD+MPER+ +W M+ + Q G ++LFLDM SG ++ TY++VL + E
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV---MTDARRMFDDIQNKNAVSW 212
L + KQLH +++ G +V + SLVD Y KC + D+R++F+ + N +SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 213 NVIVRRYLVAGN-GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
I+ Y +G KEA+ +F KM+ IRP +F+F++ L AC LS PY G Q++ +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K+ + V SL MY + GR+EDAR D E+N++S+ +IV GYA + + EA
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LFNE+ + + I T +L+ A +
Sbjct: 244 LFNEIADTGI-------------------------------GISAFTFASLLSGAASIGA 272
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ G+++HG + + Y SN + NAL+ MY +CGN+ +A F +M + R+ +SW +++T
Sbjct: 273 MGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMIT 331
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
G+A+ G + A+ F +M + T+P++ T+ +L+AC+++ + +G++
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 379
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 209/452 (46%), Gaps = 49/452 (10%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC---GNLDDARGLFD 101
Y+ + C + ++L S ++ V + ++ Y KC G++DD+R +F+
Sbjct: 54 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 113
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGR-TLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+MPE + SW A++ AY Q+G + +ELF M + N ++++VL++ +
Sbjct: 114 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 173
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+Q++ VK G + +SL+ Y + M DAR+ FD + KN VS+N IV Y
Sbjct: 174 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 233
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+EA ++F ++ I FTFA+ L + + + +G QIHG ++K ++ +
Sbjct: 234 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 293
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +L MY +CG +E A + ++ ++RN+ISWTS+++G+A G A E+F++M E
Sbjct: 294 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE-- 351
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK---- 396
T +++T +L+ C+ + I G+
Sbjct: 352 -----------------------------TGTKPNEITYVAVLSACSHVGMISEGQKHFN 382
Query: 397 ---EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ HG + R ++ + ++D+ + G L A + M D + W +L
Sbjct: 383 SMYKEHGIVPRMEHYA------CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 436
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
G +E + +EM E P LL+
Sbjct: 437 RVHGNTELGRHA-AEMILEQEPDDPAAYILLS 467
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 179/385 (46%), Gaps = 32/385 (8%)
Query: 28 KTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
K ISGH++ P +S ++ + + C + ++ S V + N I Y
Sbjct: 146 KMISGHIR---PNHFS-FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMY 201
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
+ G ++DAR FD + E++ S+NA++ Y +N LF ++ +G+ + T+A
Sbjct: 202 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 261
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L +A +G +Q+HG ++K G+ N + ++L+ Y +C + A ++F++++++
Sbjct: 262 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 321
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI- 266
N +SW ++ + G A+ MF KML +P T+ L ACS + EG +
Sbjct: 322 NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHF 381
Query: 267 ------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
HG++ +++ + ++ + G L +A ++ P + + W +++
Sbjct: 382 NSMYKEHGIVPRMEH------YACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 435
Query: 320 YAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ G R A E+ E + ++ + + + WK+ V +RK+ K+ +
Sbjct: 436 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKD----VVKIRKSMKERNL 491
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGF 401
+ AG S I++ VH F
Sbjct: 492 IKE-------AGCSWIEVENRVHRF 509
>gi|357129835|ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Brachypodium distachyon]
Length = 614
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 264/517 (51%), Gaps = 46/517 (8%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
++LV Y +C +A R+FD+++ +++VSWN ++ + ++A+ F +MLR
Sbjct: 59 NALVSMYARCGRHAEAARVFDEMRIRDSVSWNSLIG----SSGAEDALSQFRRMLRSSSS 114
Query: 242 PL------NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
P + TF L AC+ +S +HG+++ FE + V +L Y +C
Sbjct: 115 PGGGVSCDHATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFEC--- 171
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ P A F+ M ERNVI+W AM++G R
Sbjct: 172 -------ESPGS---------------------AERAFHGMAERNVITWTAMISGMAREE 203
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L+K+++ MR+T D + T L CAG +K G+++HG + + +++ V +
Sbjct: 204 LYKDSIVLFQQMRRTV-DANSATYSSSLLACAGSLALKEGQQIHGLVVKAGLETDLHVES 262
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
L+D+Y KCG L + +++ ++ D++S +L G+A+ G E+A F+EM E
Sbjct: 263 GLMDLYSKCG-LMEDTLSVFRLCRQPDEISLTVILVGFAQNGLEEKAFELFAEMAGEGIL 321
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV-VCRGALVEVYTKCCCLEYAIR 533
+L A + GKQIH VI+ C+ N+ VC G L+ +Y+KC LE +I+
Sbjct: 322 IDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRNIYVCNG-LINMYSKCGELEESIQ 380
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF E+ S + I NS+I F + +G E ++F MK +G P +TF +L C H G+
Sbjct: 381 VFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKADGANPTDVTFLSLLHGCSHVGS 440
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
K L+ +SM +YGI+P++EHY C++ + R G +++ F+ PF + + + +
Sbjct: 441 AKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAGLLEDARSFIEDGPFKDSALLWQALM 500
Query: 654 DKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
C G + +G++AA +L L+P +P + + +N +
Sbjct: 501 GACSFRGNSEIGKYAAEKLLHLDPDSPAAYVLLSNIY 537
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 220/475 (46%), Gaps = 56/475 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLL--------------NRAIECYGKC 90
YA+L L + + R + VT P FLL N + Y +C
Sbjct: 9 YAYLSGLLSRCGRAADHRLGAALHVTIVKNPSHFLLCPLRPSLRHVLVAWNALVSMYARC 68
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG--RTLELFLDMNHSGVSANQITYAN 148
G +A +FDEM RD SWN+++G+ R + GVS + T+
Sbjct: 69 GRHAEAARVFDEMRIRDSVSWNSLIGSSGAEDALSQFRRMLRSSSSPGGGVSCDHATFTT 128
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
VL + A E L +HGL+V RGF V + ++LV AY +C A R F + +N
Sbjct: 129 VLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERAFHGMAERN 188
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
++W ++ K+++V+F +M R + + T++++L AC+ + EG QIHG
Sbjct: 189 VITWTAMISGMAREELYKDSIVLFQQM-RRTVDANSATYSSSLLACAGSLALKEGQQIHG 247
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG---LLDQPDERNIISWTSIVSGYAISGR 325
+++K E D V L ++Y KCG +ED L QPDE IS T I+ G+A +G
Sbjct: 248 LVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDE---ISLTVILVGFAQNGL 304
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A ELF EM ++ ID + +L
Sbjct: 305 EEKAFELFAEMAGEGIL-------------------------------IDTNMVSAVLGA 333
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+ +GK++H + + + NI+V N L++MY KCG L + I + + ++ +S
Sbjct: 334 FGASAPFALGKQIHALVIKKCFGRNIYVCNGLINMYSKCGELEES-IQVFNETPSKNSIS 392
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQI 499
WN+++ +AR GQ E F M+ + P+ TF +LL C+++ S ++G +I
Sbjct: 393 WNSIIAAFARHGQGSEVFKLFESMKADGANPTDVTFLSLLHGCSHVGSAKKGLEI 447
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 171/369 (46%), Gaps = 28/369 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y+ CA S A+ E +++ +V + + + ++ Y KCG ++D +F
Sbjct: 226 YSSSLLACAGSLALKEGQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCR 285
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+ D S +L + QNG + ELF +M G+ + + VL + + KQ
Sbjct: 286 QPDEISLTVILVGFAQNGLEEKAFELFAEMAGEGILIDTNMVSAVLGAFGASAPFALGKQ 345
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L++K+ F N+ + + L++ Y KC + ++ ++F++ +KN++SWN I+ + G
Sbjct: 346 IHALVIKKCFGRNIYVCNGLINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQ 405
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEG 277
G E +F M + P + TF + L CS + S +G++I +G++ +++
Sbjct: 406 GSEVFKLFESMKADGANPTDVTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEH-- 463
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRI---REARELF 333
+ +M + G LEDAR + D P + + + W +++ + G + A E
Sbjct: 464 ----YACVVDMLGRAGLLEDARSFIEDGPFKDSALLWQALMGACSFRGNSEIGKYAAEKL 519
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+ + ++ + Y+ W + + MR+ +GL + G S I+
Sbjct: 520 LHLDPDSPAAYVLLSNIYSSEGRWDDRARVMKSMRE---------MGLRKDT--GKSWIE 568
Query: 394 MGKEVHGFI 402
+ KEVH F+
Sbjct: 569 LEKEVHSFV 577
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 179/631 (28%), Positives = 294/631 (46%), Gaps = 45/631 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ S YAH + + A K V F+P + + + Y +C ++DA
Sbjct: 113 PMVASSYAHFMMIRSGMNLHALACK-----VGFFPENSA-VGSSFVSLYSRCDEMNDAVK 166
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA---NQITYANVLRSSAE 155
+FDE+P RD +W A++ Y QNG LE +M G + N T +
Sbjct: 167 VFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGN 226
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+L + LHGL+VK G + ++SS++ Y KC V +A + F ++ NK+ +SW +
Sbjct: 227 LGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSM 286
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+R Y G + V F++ML + P L Y G HG+II+ +
Sbjct: 287 IRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHY 346
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D++V SL MY K G L A L Q + +I W ++ GY G+ + +LF E
Sbjct: 347 APDEMVDNSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFRE 405
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M + S + V + + C L EI +G
Sbjct: 406 MQYLGIRS-------------------------------ESVGIVSAIASCGQLGEINLG 434
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ +H + + I V+N+L++MY KC + + W RD + WNA+++ +
Sbjct: 435 RSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVS--WRIFNRSERDVILWNALISAHIH 492
Query: 456 RGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
EEA++ F M E + P+ T +L+AC++++ LE+G+++H ++ +++N+
Sbjct: 493 VKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPL 552
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
ALV++Y KC LE + VF DVI N+MI G+ N A+E+F LM++ +
Sbjct: 553 GTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNV 612
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
KP+ ITF +L AC H G V+ F M+ Y + P L+HY CM+ L R ++E E
Sbjct: 613 KPNEITFLSLLSACAHAGLVEEGKNVFAKMQ-SYSVKPNLKHYTCMVDLLGRSCNLEEAE 671
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+ V MP P + + C+ + +G
Sbjct: 672 ELVLSMPIPPDGGVWGALLSACKTHNQIEMG 702
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 190/436 (43%), Gaps = 34/436 (7%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H + V G N + + L+ Y T + +F + K+ WN ++ L + +
Sbjct: 30 FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKT-LFSRS 88
Query: 225 GKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ F+ ++R E++ P +FTF + + GM +H + K+ F ++ +G
Sbjct: 89 LYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVG 148
Query: 284 -SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
S +Y +C + DA + D+ R++++WT++V GY +G E +EM
Sbjct: 149 SSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEM------ 202
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ + ++ + TL C L ++ G+ +HG +
Sbjct: 203 ----------------------YRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLV 240
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+N + + +++L MY KCG R A F ++ +D +SW +++ YAR G +
Sbjct: 241 VKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVIN-KDLLSWTSMIRVYARFGMMSDC 299
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F EM + + P +L+ N + GK H +IR Y + + +L+ +
Sbjct: 300 VRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSM 359
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y K L +A R+F+ S + N MI+G+ + + +++F M+ GI+ + +
Sbjct: 360 YCKFGMLSFAERLFQRSQG-SIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGI 418
Query: 582 HGILLACIHEGNVKLA 597
+ +C G + L
Sbjct: 419 VSAIASCGQLGEINLG 434
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 147/341 (43%), Gaps = 31/341 (9%)
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
++S Y + LF+ +P ++ WN+ L L+ + L F LMR +
Sbjct: 49 LISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPN 108
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHR-NDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
T ++ + A I+ G +H + + N V ++ + +Y +C + A F
Sbjct: 109 HFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVF 168
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM----QWETRPSKFTFETLLAACANI 490
++ RD V+W A++ GY + G+SE + SEM +P+ T E AC N+
Sbjct: 169 DEIPV-RDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNL 227
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
L G+ +H V++N + + +++ +Y KC A + F E + D++ SMI
Sbjct: 228 GDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMI 287
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM-----R 605
+ + + F M + + PD G+++ CI G F +S+ +
Sbjct: 288 RVYARFGMMSDCVRFFWEMLENQVCPD-----GMVIGCILSG-------FGNSVDVYGGK 335
Query: 606 CKYGIIPQLEHY-------ECMIKLYCRYGYMKELEDFVNR 639
+G+I + HY ++ +YC++G + E R
Sbjct: 336 AFHGLIIR-RHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR 375
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 271/553 (49%), Gaps = 41/553 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+N L+ SA++ L KQLH ++K GFC + L++ ++ Y KC DA+++F+++
Sbjct: 64 SNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV 123
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVM------FFKMLREDIRPLNFTFANALFACSFLSSP 260
+N VSWN+++R + + E+ M F +ML E + P + TF + C+ +
Sbjct: 124 RNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDI 183
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G+Q+H +K+ F+ D V +L +Y KCG +E+A
Sbjct: 184 EMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENA---------------------- 221
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
R +F ++ R+++ WN M++ Y + L +EA MR + D+ T
Sbjct: 222 ---------RRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFS 272
Query: 381 LILNVCA--GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+L+V + L GK+VH + R + S++ V++AL++MY K N+ AR F +MS
Sbjct: 273 SLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMS 332
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
R+ V+WN ++ G+ G E M EM E P + T +++++C S++ +
Sbjct: 333 -IRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETL 391
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H F ++ + + +L+ Y+KC + A + F+ +S D++ S+I + +
Sbjct: 392 QVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHG 451
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
++ E+F M GIKPD I F G+L AC H G V L +F M Y I+P EHY
Sbjct: 452 LAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHY 511
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C++ L RYG + E + + MP L C+ + L + AA +L + P
Sbjct: 512 TCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEP 571
Query: 678 WAPFQFKITTNRF 690
+ + +N F
Sbjct: 572 EKSVNYAVMSNIF 584
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 247/513 (48%), Gaps = 54/513 (10%)
Query: 16 SSPKPTPSKTLTK-----TISGHLKSDEPVSYSLY-AHLFQLCASSKAIVEARKLESNLV 69
SS +P P + ++ I ++P + L+ ++ ++ A + E ++L ++L+
Sbjct: 28 SSHQPHPWNSSSRLRASMPIPNQTHFNDPNTVHLFCSNALKISAKKGYLPEGKQLHAHLI 87
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAML----GAYTQNGFPG 125
F + L N+ + Y KC +DA+ LF+E+P R+ SWN M+ G +N G
Sbjct: 88 KFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSG 147
Query: 126 RTL--ELFLDMNHSGVSANQITYANV--LRSSAEELELGVSKQLHGLIVKRGFCGNVILE 181
L F M + + IT+ + L + ++E+GV QLH VK GF + +
Sbjct: 148 MRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGV--QLHCFTVKVGFDLDCFVG 205
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+LV Y KC + +ARR+F D+ ++ V WNV+V Y+ +EA +F M + +
Sbjct: 206 CALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVN 265
Query: 242 PLNFTFANALFACSFLSSPYE--GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
FTF++ L S + Y G Q+H ++++ F+ D +V +L MY K + DAR
Sbjct: 266 GDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDAR 325
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ D+ RN+++W +++ G+ G E +L EM +
Sbjct: 326 RVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLP---------------- 369
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
D++T+ I++ C S I +VH F + + V+N+L+
Sbjct: 370 ---------------DELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLIS 414
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKF 478
Y KCG++ SA F +++ + D V+W +++ YA G +E++ F +M + +P +
Sbjct: 415 AYSKCGSITSAFKCF-ELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRI 473
Query: 479 TFETLLAACANISSLEQGKQIHCF-VIRNCYEI 510
F +L+ACA+ + +G +H F ++ N Y+I
Sbjct: 474 AFLGVLSACAHCGLVTKG--LHYFKLMTNAYQI 504
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 152/350 (43%), Gaps = 18/350 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + + I Y K N+ DAR +FDEM R+ +WN M+ + +G ++L +M
Sbjct: 305 VLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLR 364
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G +++T ++++ S + + Q+H VK + + +SL+ AY KC +T
Sbjct: 365 EGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITS 424
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A + F+ + V+W ++ Y G +++ MF KML I+P F L AC+
Sbjct: 425 AFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAH 484
Query: 257 LSSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWT 314
+G+ ++ D L ++ + G + +A +L P E + +
Sbjct: 485 CGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLG 544
Query: 315 SIVSGYAISGRIREAR----ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+ + + + A+ +LF PE++V ++ M + W + V +RKT
Sbjct: 545 AFIGSCKLHSNMELAKLAAEKLFLIEPEKSV-NYAVMSNIFASQKHWYD----VERIRKT 599
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
+D + G S I++G ++H F+ + N L+M
Sbjct: 600 MEDKRDAKV-------PGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNM 642
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 273/551 (49%), Gaps = 52/551 (9%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
++A +RS + + + +H I + G + L + LV K + +AR +FD I
Sbjct: 46 SFAAAIRSCKDSNSVSI---IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAI 102
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
Q+KN SWN+I+ Y G+ A+ +F KM D+ P TFA AL ACS L G
Sbjct: 103 QHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGR 159
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
+IH R++ +RG+ +P ++I T+I S YA G
Sbjct: 160 EIHA-------------------------RIKASRGI--RP---SVILDTAIFSMYAKCG 189
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ A+ +F+ +P +NV+SWNA++A Y +S +ALD M + + T +L
Sbjct: 190 DLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVL 249
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYS---SNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
C ++ ++ ++H I ++ V NALL+MY KCG+L AR F +M QR
Sbjct: 250 GACNDVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKM-QR 305
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQGKQI 499
RD+VS N ++ +A++G +E++ F EM E P TF +++ AC+ +LE GK+I
Sbjct: 306 RDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRI 365
Query: 500 HCFVI-----RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
H V+ R C NVV ALV +Y KC LE A VFK ++ + + N+M+
Sbjct: 366 HKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACA 425
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
H +G EA EG++ D +F +L+AC H G +++A F M + ++P
Sbjct: 426 HQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAA 485
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNE 674
E+Y CM+ L R G + + ++ +N MPF+P R + CR G AA +
Sbjct: 486 ENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFN 545
Query: 675 LNPW--APFQF 683
L P AP+
Sbjct: 546 LEPQNTAPYTL 556
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 203/428 (47%), Gaps = 49/428 (11%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
+L N + K G+L +AR +FD + ++ SWN ++ AY G P L LF M+
Sbjct: 77 YLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMD-- 134
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLI-VKRGFCGNVILESSLVDAYGKCMVMTD 196
V +T+A L + + +L +++H I RG +VIL++++ Y KC ++
Sbjct: 135 -VPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLST 193
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNG-KEAVVMFFKMLREDIRPLNFTFANALFACS 255
A+ +FD I KN VSWN ++ Y +G+ +A+ +F KM +RP TF L AC+
Sbjct: 194 AKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACN 253
Query: 256 FLSSPYEGMQIHGVIIK--IDFEGDDV-VLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
++S +IH I++ + F+ DV V +L MY KCG LE AR + + R+ +S
Sbjct: 254 DVTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVS 310
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+++ +A G +E+ ++F EM L G +
Sbjct: 311 MNVMIATFAQQGLGKESIQVFREMD----------LEGLPQ------------------- 341
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHG-----FIHRNDYSSNIFVSNALLDMYRKCGNL 427
D T ++ C+ ++ GK +H + R N+ V AL+ MY KCG L
Sbjct: 342 --DDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTL 399
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAA 486
A+ F M+ ++ VSWNA+L A +GQ +EA E +F ++L A
Sbjct: 400 EQAKAVFKAMTT-KNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIA 458
Query: 487 CANISSLE 494
C++ LE
Sbjct: 459 CSHSGMLE 466
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 218/491 (44%), Gaps = 60/491 (12%)
Query: 12 ILSKSSPKPTPSKTLTKTISGHL--KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLV 69
I+S + + PS L HL K D P + +A C+S + R++ + +
Sbjct: 113 IISAYAHRGHPSTAL------HLFAKMDVPPTAMTFATALSACSSLGDLQRGREIHARIK 166
Query: 70 TFYPTPPVFLLNRAI-ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFP-GRT 127
P +L+ AI Y KCG+L A+ +FD +P ++ SWNA++ AY Q+G +
Sbjct: 167 ASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQA 226
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF---CGNVILESSL 184
L+LF M GV + T+ VL + + L +++H IV+ G +V ++++L
Sbjct: 227 LDLFEKMAEHGVRPCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNAL 283
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++ Y KC + AR +F +Q ++ VS NV++ + G GKE++ +F +M E + +
Sbjct: 284 LNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDD 343
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFE-----GDDVVLGSLTEMYVKCGRLEDAR 299
TFA+ + ACS + G +IH +++ + VV +L MY KCG LE A+
Sbjct: 344 TTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAK 403
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFN----EMPERNVISWNAMLAGYTRSL 355
+ +N +SW ++++ A G+ EA E E + S+ ++L + S
Sbjct: 404 AVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSG 463
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+ + A D LM LS+ + +
Sbjct: 464 MLEVAYDHFQLM---------------------LSDFDLVPAAENY-------------R 489
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
++D+ + G L A M D ++W +L G +G E A S +E + P
Sbjct: 490 CMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENA-ASAAEQAFNLEP 548
Query: 476 SKFTFETLLAA 486
TLL++
Sbjct: 549 QNTAPYTLLSS 559
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 46/365 (12%)
Query: 59 VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY 118
+ AR +E+ L + V + N + Y KCG+L+ AR +F +M RD S N M+ +
Sbjct: 261 IHARIVETGLQ--FDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATF 318
Query: 119 TQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQLHGLIVK----R 172
Q G ++++F +M+ G+ + T+A+V+ S LE G K++H +V+ R
Sbjct: 319 AQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFG--KRIHKRVVEPVLGR 376
Query: 173 GFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
C NV++E++LV YGKC + A+ +F + KN+VSWN ++ G G EA
Sbjct: 377 KCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAF 436
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-----LT 286
E + + +F + L ACS S E H ++ DF D+V + +
Sbjct: 437 LRAAACEGVELDSASFISVLIACSH-SGMLEVAYDHFQLMLSDF---DLVPAAENYRCMV 492
Query: 287 EMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIRE----ARELFNEMPERNV 341
++ + GRL DA L++ P + I+W +++ G + G + A + FN P+ N
Sbjct: 493 DLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQ-NT 551
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK---EV 398
+ + + Y+ + E ++ +R + K+ GL ++ G+ EV
Sbjct: 552 APYTLLSSLYSATGKKDELVE----LRSSMKE-------------RGLRKLVPGRSVIEV 594
Query: 399 HGFIH 403
HG +H
Sbjct: 595 HGRVH 599
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 248/484 (51%), Gaps = 33/484 (6%)
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-L 285
+AV + ++ IR A+ L C S +G IH + F+ + +L + L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY+KCG+ DA + DQ RN+ SW ++VSGY SG + AR +F+ MPER+V+SWN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M+ GY + EAL F R++ ++ + +L C ++++ ++ HG +
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------------- 440
+ SN+ +S +++D Y KCG + SA+ F +M+ +
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 441 -----RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
++ VSW A++ GY R+G A+ F +M +P +FTF + L A A+I+SL
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGF 553
GK+IH ++IR N + +L+++Y+K LE + RVF+ D + N+MI
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ G +AL + M K ++P+ T IL AC H G V+ L++F+SM ++GI+P
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
EHY C+I L R G KEL + MPF P + I CR +G LG+ AA L
Sbjct: 449 QEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI 508
Query: 674 ELNP 677
+L+P
Sbjct: 509 KLDP 512
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 212/424 (50%), Gaps = 14/424 (3%)
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+++V Y K ++ AR +FD + ++ VSWN +V Y GN EA+ + + R I+
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGL 301
F+FA L AC Q HG ++ F + V+ S+ + Y KCG++E A+
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D+ ++I WT+++SGYA G + A +LF EMPE+N +SW A++AGY R AL
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
D M +Q T L A ++ ++ GKE+HG++ R + N V ++L+DMY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
K G+L ++ F + D V WN +++ A+ G +A+ +M ++ +P++ T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 481 ETLLAACANISSLEQG-KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS 539
+L AC++ +E+G + +++ + L+++ + C + +R +E
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Query: 540 -SLDVIICNSMILGFC----HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
D I N+ ILG C + E G++A + + E P ILL+ I+ +
Sbjct: 477 FEPDKHIWNA-ILGVCRIHGNEELGKKAADELIKLDPESSAP------YILLSSIYADHG 529
Query: 595 KLAL 598
K L
Sbjct: 530 KWEL 533
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 225/524 (42%), Gaps = 108/524 (20%)
Query: 8 ILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESN 67
+ ++ LSK + K S+ +++ + + + + L A L Q C +K++ + + + +
Sbjct: 13 VAQSFLSKHATKAELSQAVSR-LESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRH 71
Query: 68 L-VTFYPTPPVFLLNRAIECYGKCGNLDDA------------------------------ 96
L +T + P L N I Y KCG DA
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVR 131
Query: 97 -RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
R +FD MPERD SWN M+ Y Q+G L + + SG+ N+ ++A +L + +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ---------- 205
+L +++Q HG ++ GF NV+L S++DAY KC M A+R FD++
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 206 ---------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
KN VSW ++ Y+ G+G A+ +F KM+ ++P
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FTF++ L A + ++S G +IHG +I+ + + +V+ SL +MY K G LE + +
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
D+++ + + WN M++ + L +AL +
Sbjct: 372 CDDKH------------------------------DCVFWNTMISALAQHGLGHKALRML 401
Query: 365 FLMRKTTKDIDQVTLGLILNVCA-------GLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
M K ++ TL +ILN C+ GL + HG + ++ + L
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA------CL 455
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+D+ + G + +M DK WNA+L G R +EE
Sbjct: 456 IDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL-GVCRIHGNEE 498
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 51 LCASSK--AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER-D 107
LCAS+ ++ +++ ++ P +++ I+ Y K G+L+ + +F ++ D
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHD 377
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELGVSKQL 165
WN M+ A Q+G + L + DM V N+ T +L + + +E G+ +
Sbjct: 378 CVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL-RWF 436
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVIVRRYLVAGN 224
+ V+ G + + L+D G+ + R +++ + WN I+ + GN
Sbjct: 437 ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Query: 225 ---GKEAVVMFFKMLREDIRP 242
GK+A K+ E P
Sbjct: 497 EELGKKAADELIKLDPESSAP 517
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 265/535 (49%), Gaps = 32/535 (5%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
LG ++H ++G +V + + ++ Y +C + A+++F +I+ ++ V+W+ I+
Sbjct: 4 LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAA 63
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
++ +G +EA+ +F M E ++ ++L AC+ +SS G +H +K + + D
Sbjct: 64 FVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLD 123
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L MY KC G A LFN MP
Sbjct: 124 ISVGTALVSMYAKC-------------------------------GFFALALTLFNRMPC 152
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V++WNAM+ GY + AL+ ++ + + + T+ +L A L+++ G +
Sbjct: 153 KDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCI 212
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG I + + S V AL+DMY KCG+L A F++ R+D+VSWN ++ GY G
Sbjct: 213 HGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGH 272
Query: 459 SEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+ +A ++F +M+ E +P+ T T+L A A++S+L G +H +VIR ++
Sbjct: 273 AIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNC 332
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y KC L+++ ++F E + D + N M+ G+ + RG A+E+F M+ I+ D
Sbjct: 333 LIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLD 392
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+F +L AC H G + + FDSM ++ + P LEHY CM L R G E+ D +
Sbjct: 393 SFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLI 452
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
MP P + + + L E+A L++L + +N + R
Sbjct: 453 KSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYAALSNTYAR 507
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 246/547 (44%), Gaps = 75/547 (13%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y +CG +D A+ LF E+ RD +W+A++ A+ Q+G+P L LF M + G+ AN++
Sbjct: 33 YARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVIL 92
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+ L + AE L + K +H VK ++ + ++LV Y KC A +F+ +
Sbjct: 93 LSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPC 152
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
K+ V+WN ++ Y G A+ MF K+ ++ P + T L A + L+ +G I
Sbjct: 153 KDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCI 212
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGR 325
HG IIK FE + V +L +MY KCG L A L + ++ +SW +++GY SG
Sbjct: 213 HGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGH 272
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A F +M N+ + VT+ +L
Sbjct: 273 AIDAFSAFCQMKLENI-------------------------------QPNIVTIVTVLPA 301
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
A LS ++ G +H ++ R + S V N L+DMY KCG L + F++M + +D VS
Sbjct: 302 VAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEM-KNKDTVS 360
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN +L GYA G+ A+ FS MQ E R F+F +L+AC + + +G++I
Sbjct: 361 WNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKI----- 415
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ + + L+ C + +LG R E
Sbjct: 416 -----------------------FDSMSKQHQLEPDLEHYACMADLLG-----RAGLFNE 447
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKL---ALQFFDSMRCKYGIIPQLEHYECMI 621
V L+K ++PD + +L A NV+L AL D + K L HY +
Sbjct: 448 VLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHK-----NLTHYAALS 502
Query: 622 KLYCRYG 628
Y R G
Sbjct: 503 NTYARSG 509
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 1/259 (0%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y KCG A LF+ MP +D +WNAM+ Y Q G P LE+F + S ++ N
Sbjct: 131 VSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNS 190
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T +L + A +L +HG I+K GF ++++L+D Y KC ++ A +F
Sbjct: 191 GTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHR 250
Query: 204 IQ-NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
K+ VSWNV++ Y+ +G+ +A F +M E+I+P T L A + LS+
Sbjct: 251 TGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRA 310
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
GM +H +I++ F+ V L +MY KCG L+ + + + ++ +SW +++GYA+
Sbjct: 311 GMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAV 370
Query: 323 SGRIREARELFNEMPERNV 341
GR A ELF+ M + +
Sbjct: 371 HGRGSCAIELFSRMQDSEI 389
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 6/282 (2%)
Query: 84 IECYGKCGNLDDARGLFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
I+ Y KCG+L A LF +D SWN M+ Y +G F M + N
Sbjct: 232 IDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPN 291
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+T VL + A L LH +++ GF + + L+D Y KC + + ++F
Sbjct: 292 IVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFH 351
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+++NK+ VSWNV++ Y V G G A+ +F +M +IR +F+F N L AC E
Sbjct: 352 EMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGE 411
Query: 263 GMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGY 320
G +I + K E D + ++ + G + L+ P E + W +++
Sbjct: 412 GRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGAS 471
Query: 321 AISGRIREAR---ELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ ++ A +++ +N+ + A+ Y RS W +
Sbjct: 472 TMHSNVQLAEFALHHLDKLEHKNLTHYAALSNTYARSGRWAD 513
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 20/196 (10%)
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L +G +IH F + + +V ++ +Y +C ++ A ++F+E D++ +++I
Sbjct: 3 ALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIA 62
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KY 608
F + +EAL +F M+ EG++ + + L AC ++KL SM C K
Sbjct: 63 AFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLG----KSMHCCAVKA 118
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE-- 666
+ + ++ +Y + G+ NRMP V I NGYA +GE
Sbjct: 119 NVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMI------NGYAQIGEPF 172
Query: 667 -----WAARRLNELNP 677
+ +L+ELNP
Sbjct: 173 PALEMFHKLQLSELNP 188
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
F PV N I+ Y KCG LD + +F EM +D SWN ML Y +G +EL
Sbjct: 323 FQSKTPVG--NCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIEL 380
Query: 131 FLDMNHSGVSANQITYANVLRS 152
F M S + + ++ NVL +
Sbjct: 381 FSRMQDSEIRLDSFSFINVLSA 402
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/614 (26%), Positives = 297/614 (48%), Gaps = 36/614 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT--LELFLDMNHSGVSANQITYAN 148
G+L A LFD++P D ++N ++ AY+ + L L+ M V+ N T+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
L++ + + + +H + G ++ + ++L+D Y KC + DA +F + ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 209 AVSWNVIVRRYLVAGNGKEAV--VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
V+WN ++ Y G AV ++ +M +RP T L + + +G +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H I+ + LT+ ++ T+++ YA G +
Sbjct: 251 HAYCIRACLHPNRNSKSKLTD---------------------GVLLGTALLDMYAKCGSL 289
Query: 327 REARELFNEMPERNVISWNAMLAGYTR-SLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
AR +F+ MP RN ++W+A++ G+ S + + L F ++ + + ++ L
Sbjct: 290 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 349
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CA L ++MG+++H + ++ +++ N+LL MY K G + A F +M+ + D VS
Sbjct: 350 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVS 408
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIH-CFV 503
++A+++GY + G++EEA F +MQ P T +L+ AC+++++L+ G+ H +
Sbjct: 409 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 468
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
IR +C AL+++Y KC ++ + +VF S D++ N+MI G+ + G+EA
Sbjct: 469 IRGLASETSICN-ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 527
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
+F M G PD +TF +L AC H G V +F M YG+ P++EHY CM+ L
Sbjct: 528 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 587
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
R G++ E +F+ MP V + + CR LG+ +R + EL P F
Sbjct: 588 LSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNF 647
Query: 684 KITTN------RFD 691
+ +N RFD
Sbjct: 648 VLLSNIYSAAGRFD 661
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 202/436 (46%), Gaps = 46/436 (10%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE--LFLDM 134
+F+ ++ Y KC L DA +F MP RD +WNAML Y +G + L + M
Sbjct: 160 LFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQM 219
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV----------KRGFCGNVILESSL 184
+ N T +L A++ L +H + K V+L ++L
Sbjct: 220 QMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTAL 279
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
+D Y KC + ARR+FD + +N V+W+ ++ +++ +A ++F ML + + L+
Sbjct: 280 LDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLS 339
Query: 245 FT-FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
T A+AL AC+ L G Q+H ++ K D SL MY K G ++ A L D
Sbjct: 340 PTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFD 399
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ ++ +S++++VSGY +GR EA +F +M NV
Sbjct: 400 EMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNV---------------------- 437
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+ D T+ ++ C+ L+ ++ G+ HG + +S + NAL+DMY K
Sbjct: 438 ---------EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG + +R F M RD VSWN ++ GY G +EA F EM P TF
Sbjct: 489 CGRIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547
Query: 483 LLAACANISSLEQGKQ 498
LL+AC++ + +GK
Sbjct: 548 LLSACSHSGLVIEGKH 563
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 142/264 (53%), Gaps = 1/264 (0%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
T V L ++ Y KCG+L AR +FD MP R+ +W+A++G + + LF
Sbjct: 270 TDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKA 329
Query: 134 MNHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ + + A+ LR+ A L + +QLH L+ K G ++ +SL+ Y K
Sbjct: 330 MLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 389
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
++ A +FD++ K+ VS++ +V Y+ G +EA ++F KM ++ P T + +
Sbjct: 390 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACS L++ G HG +I + + +L +MY KCGR++ +R + + R+I+S
Sbjct: 450 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 509
Query: 313 WTSIVSGYAISGRIREARELFNEM 336
W ++++GY I G +EA LF EM
Sbjct: 510 WNTMIAGYGIHGLGKEATALFLEM 533
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP + ++ + L C+ A+ R +++ + N I+ Y KCG +D +R
Sbjct: 438 EPDAATMVS-LIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSR 496
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ MP RD SWN M+ Y +G LFL+MN+ G + +T+ +L + +
Sbjct: 497 QVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHS 555
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/570 (27%), Positives = 280/570 (49%), Gaps = 63/570 (11%)
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG----- 223
IVK ++++ + ++ AY + + AR +FD++ +N VSW+ ++ + G
Sbjct: 78 IVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEES 137
Query: 224 ------------------------NGK--EAVVMFFKMLREDIRPLNFTFANALFACSFL 257
NG EA+ +FF++L +RP + TF + + AC L
Sbjct: 138 MWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
GM I G+++K FE V SL + ++ G ++ AR + D+ ++R+++SWT+I+
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
Y +G +REAR +F+EMPERN ISW+AM+A Y++S +EAL M + +
Sbjct: 258 DAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF--- 434
L+ A L + G +HG + + ++F+ ++L+D+Y KCG R+ F
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLI 377
Query: 435 --------------YQMSQR-------------RDKVSWNAVLTGYARRGQSEEAMTSFS 467
Y ++ R ++ SW +J GY Q E+ + F+
Sbjct: 378 LEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFN 437
Query: 468 EMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+ + P+K TF ++L ACA+I+SL++G +H +I+ + ++ AL ++Y KC
Sbjct: 438 TLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCG 497
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGIL 585
+ + +VF+ + I MI G + E+L +F M++ + P+ + +L
Sbjct: 498 DIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V L +F+SM YGI P+ +HY C++ L R G + E E+F+ +PF P
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ C+K + E A++L +L
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQL 647
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 264/528 (50%), Gaps = 76/528 (14%)
Query: 44 LYAHLFQLCASSKAIVEARKLE-----------SNLVTFYPTPPVFLLNRAIECYGKCGN 92
L+AHL + SS+ + + L +V + + + N I Y + GN
Sbjct: 43 LHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGN 102
Query: 93 LDDARGLFDEMPERDGGSWNAMLGA-------------------------------YTQN 121
L AR LFDEMPER+ SW+A++ + +N
Sbjct: 103 LVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRN 162
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF------- 174
G L+LF + SGV N +T+ +V+R+ E + G+ + GL+VK GF
Sbjct: 163 GLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVS 222
Query: 175 ------------------------CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
+V+ ++++DAY + + +ARR+FD++ +N +
Sbjct: 223 NSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPERNEI 282
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SW+ ++ RY +G +EA+ +F KM++E +P FA L A + L + G+ IHG +
Sbjct: 283 SWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHV 342
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
KI + D + SL ++Y KCG+ +D R + D E+N++ W S+V GY+I+GR+ E
Sbjct: 343 TKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXE 402
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
ELF +PE+N SW +JAGY + ++ L+ + + + ++ T +L CA ++
Sbjct: 403 ELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIA 462
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ G VHG I + +IFV AL DMY KCG++ S++ F +M + ++++SW ++
Sbjct: 463 SLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPE-KNEISWTVMI 521
Query: 451 TGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQG 496
G A G + E++ F EM+ E P++ ++L AC++ +++G
Sbjct: 522 QGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKG 569
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 195/474 (41%), Gaps = 96/474 (20%)
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
+G +H +IK F + L +Y+ C + + ++ + D +++ ++S Y
Sbjct: 39 QGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYV 98
Query: 322 ISGRIREARELFNEMPER-------------------------------NVISWNAMLAG 350
G + +AR LF+EMPER NV+SW A ++G
Sbjct: 99 QWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISG 158
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ R+ L EAL F + ++ + VT ++ C L + +G + G + + +
Sbjct: 159 FVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHY 218
Query: 411 IFVSN-------------------------------ALLDMYRKCGNLRSARIWFYQMSQ 439
+ VSN A+LD Y + G+LR AR F +M +
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
R+++SW+A++ Y++ G +EEA+ FS+M E +P+ F L+A A++ +L G
Sbjct: 279 -RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGIN 337
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSM--------- 549
IH V + + +V +L+++Y KC + VF +V+ NSM
Sbjct: 338 IHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGR 397
Query: 550 ----------------------ILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
J G+ NE+ + LEVF + G P+ TF +L A
Sbjct: 398 LEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
C ++ + + K GI + + +Y + G + + RMP
Sbjct: 458 CASIASLDKGMNVHGKI-IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMP 510
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 149/341 (43%), Gaps = 63/341 (18%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S +A AS +A+ + ++ VF+ + I+ Y KCG DD R +FD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 103 MPERDGGSWNAMLGAYTQNG-----------------------FPG--------RTLELF 131
+ E++ WN+M+G Y+ NG G + LE+F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVF 436
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
+ SG + N+ T+++VL + A L +HG I+K G ++ + ++L D Y KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 192 MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANA 250
+ ++++F+ + KN +SW V+++ +G E++++F +M R ++ P +
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
LFACS +G+ +E G+ +P ++
Sbjct: 557 LFACSHCGLVDKGLWYF-------------------------NSMEKVYGI--KPKGKH- 588
Query: 311 ISWTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLAG 350
+T +V + SGR+ EA E +P + +W A+L+G
Sbjct: 589 --YTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSG 627
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S + + S ++ + CAS ++ + + ++ +F+ + Y KCG++
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVL 150
++ +F+ MPE++ SW M+ ++GF +L LF +M S V+ N++ +VL
Sbjct: 500 GSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
>gi|242047556|ref|XP_002461524.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
gi|241924901|gb|EER98045.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
Length = 867
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 169/640 (26%), Positives = 307/640 (47%), Gaps = 28/640 (4%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+P N + Y + G L DAR +FD MP RD S++A++ + + G G
Sbjct: 72 SPDARASNAVMCAYLRAGRLADARDVFDRMPARDAASYSALISGHARLGGGGAAAAAAEL 131
Query: 134 MNH----SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+ G+ + T+ +L + A + Q+H L+ K G ++++ ++L+ Y
Sbjct: 132 LGRMRLADGLLPTEYTFVGLLTACARRGNPRLGTQVHALVAKSGHASSLLVANALLGMYV 191
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFA 248
KC DA R FD + ++ SWN ++ + G +EA +F +M ++R FT +
Sbjct: 192 KCGRFGDALRAFDGMDRRDVSSWNAVLAGLVELGRHEEAFELFGEMRASGNVRADRFTLS 251
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG-RLEDARGLLDQPDE 307
L A +G +H + +K E D V +L Y + G ++D + +
Sbjct: 252 ALLAAAGEGFGQPQGEAVHALSLKSGLETDLSVGNALIGFYAEHGASVDDVVSVFQRMPV 311
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF-- 365
+++ISWT +++GY G + A ++F MP+RN +++NA+L G+ ++ KE + F
Sbjct: 312 KDVISWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGFCQN---KEGVRVTFAK 368
Query: 366 --------LMRKTTK---DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
L R+ + +I VT+ +LN CA ++ K ++VH F+ + S+ ++
Sbjct: 369 KAGFRGLGLFRQMVEAGLEISDVTVTGVLNACAIAADRKASEQVHAFVIKCGCVSSPWID 428
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRD-KVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
AL+DM KCG A + F Q ++WN++L R G+ E+A+++F +M +
Sbjct: 429 AALIDMCIKCGRSGDAHLLFEQWQHDESFHIAWNSLLLASVRDGEYEKALSTFLQMFRSS 488
Query: 474 RP---SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
+F +L C ++ E GKQ+H F ++ A++ +Y KC L+
Sbjct: 489 GVEFIDEFMLTAVLGVCGSLGFAELGKQMHSFTAKSGLLCARGVGNAIISMYGKCGELKD 548
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A F+ + D++ N+MI + +G E L+++ M++ ++PD ITF ++ AC H
Sbjct: 549 AGSFFEGMTCRDLVSWNAMITAHLLHHQGDEILKIWSEMERLMVRPDSITFLLVISACSH 608
Query: 591 EG--NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ + F +M YGI P +EHY + + +G+ + E + MP P +
Sbjct: 609 TSSDSTQKCRDLFLTMPSTYGIEPAMEHYAAFVYVLGCWGHFDDAEQLIGGMPLKPGALV 668
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
R + D C K+ + A + L L P P + +T+N
Sbjct: 669 WRSLLDSCSKHSNMAVRRRAMKHLLALEPQDPSTYVLTSN 708
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 18/280 (6%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN----------- 121
P V + Y + G +D A +F+ MP+R+ ++NA+L + QN
Sbjct: 310 PVKDVISWTGLLNGYMEFGLVDMALDVFERMPQRNFVTYNAVLTGFCQNKEGVRVTFAKK 369
Query: 122 -GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
GF R L LF M +G+ + +T VL + A + S+Q+H ++K G + +
Sbjct: 370 AGF--RGLGLFRQMVEAGLEISDVTVTGVLNACAIAADRKASEQVHAFVIKCGCVSSPWI 427
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNA--VSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+++L+D KC DA +F+ Q+ + ++WN ++ + G ++A+ F +M R
Sbjct: 428 DAALIDMCIKCGRSGDAHLLFEQWQHDESFHIAWNSLLLASVRDGEYEKALSTFLQMFRS 487
Query: 239 DIRPL--NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
F L C L G Q+H K V ++ MY KCG L+
Sbjct: 488 SGVEFIDEFMLTAVLGVCGSLGFAELGKQMHSFTAKSGLLCARGVGNAIISMYGKCGELK 547
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
DA + R+++SW ++++ + + + E ++++EM
Sbjct: 548 DAGSFFEGMTCRDLVSWNAMITAHLLHHQGDEILKIWSEM 587
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/567 (27%), Positives = 275/567 (48%), Gaps = 33/567 (5%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N L + ++ G + +M+ + VS +Y + + + L + +H + +
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
+ +E+ L+ Y C D +++FD++ KN VSW +++ Y G ++A+ +
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F M IRP + + + L +C S G Q+H +I+ + V ++ MYV+
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVR 235
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG LE A+ +F+ M +N ++W ++ GY
Sbjct: 236 CGWLEGAK-------------------------------LVFDGMDAQNAVTWTGLMVGY 264
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
T++ + AL+ M ++D+ ++L VC L + MGK++H I + S +
Sbjct: 265 TQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEV 324
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
V L+D Y KCG++ SA F ++S+ D VSW+A+++G+++ G+ E+ + F+ ++
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRS 383
Query: 472 E-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E + F + ++ ACA ++L G Q H I+ + A+V +Y+KC L+Y
Sbjct: 384 EGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDY 443
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
A R F+ D + ++I G+ ++ EAL F M+ G++P+ +TF +L AC H
Sbjct: 444 ARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSH 503
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
G V A Q+ SM YG+ P ++HY+CMI Y R G + E + +NRMPF P +
Sbjct: 504 SGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWK 563
Query: 651 KIFDKCRKNGYATLGEWAARRLNELNP 677
+ C + LG+ AA L L+P
Sbjct: 564 SLLGGCWAHCDLKLGKIAAENLFRLDP 590
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 222/464 (47%), Gaps = 33/464 (7%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDD 95
+D V+ Y LF+ C +++ + R + L P + N + Y CG+ D
Sbjct: 81 ADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXID 140
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+ +FDEM ++ SW ++ AY +NG + + LF DM SG+ N Y ++L+S
Sbjct: 141 VQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLG 200
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
L + KQ+H +++ N+ +E+++ + Y +C + A+ +FD + +NAV+W +
Sbjct: 201 PSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGL 260
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ Y A + A+ +F +M E + F F+ L C L G QIH I+K+
Sbjct: 261 MVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGX 320
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E + V L + YVKCG +E A + E N +SW++++SG++ SGR+ + ++F
Sbjct: 321 ESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTS 380
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ V+ ++ + CA + + MG
Sbjct: 381 LRSEGVV-------------------------------LNSFIYTSVFQACAAQANLNMG 409
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ HG + S ++ +A++ MY KCG L AR F + + D V+W A+++GYA
Sbjct: 410 SQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE-PDAVAWTAIISGYAY 468
Query: 456 RGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQ 498
G + EA+ F MQ + RP+ TF +L AC++ + + KQ
Sbjct: 469 HGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQ 512
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 270/548 (49%), Gaps = 40/548 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S YA L Q C S + + E R+L +L +L ++ Y KCG L DA+ FDE
Sbjct: 15 SRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDE 74
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ +++ WN M+ Y ++G LELF M+ + N +A+ L + A +L
Sbjct: 75 IADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASALAACAGLGDLEQG 131
Query: 163 KQLHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+++H +++ R +V++++SLV Y +C + + ++FD + KN VSWN ++ ++
Sbjct: 132 REIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQ 191
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
++A+ ++ +M RE + P F FA+ L AC+ L + G IH I + + D V+
Sbjct: 192 CDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVM 251
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY KCG ++ EA E+F+ + R+V
Sbjct: 252 ENALINMYSKCGCMD-------------------------------EALEVFSGLATRDV 280
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+W +M+AGY + EA F MR+ T +L+ C S ++ GK +H
Sbjct: 281 FTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSAC---STLEQGKHLHEE 337
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + S V AL+ MY +CG+L A F +M Q++D VSW+A++T +A+ G +
Sbjct: 338 VKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKM-QQKDYVSWSAMVTSHAQFGDPGK 396
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+T F +M E + S TF + L AC+ K I + + + R LV
Sbjct: 397 ALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVS 456
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
Y+KC +E A ++F S DV+ MI G+ + ALE+F MK EG++PD +T
Sbjct: 457 AYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVT 516
Query: 581 FHGILLAC 588
F +L AC
Sbjct: 517 FSSVLQAC 524
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/652 (26%), Positives = 303/652 (46%), Gaps = 45/652 (6%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYP-TPPVFLLNRAIECYGKCGNL 93
K D P + ++A CA + + R++ ++ V + N + Y +CG++
Sbjct: 105 KMDIPPNGFIFASALAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSV 164
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+ +FD MP ++ SWNAM+ A+ Q +P + LEL+ M + N +A++L +
Sbjct: 165 LEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTAC 224
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
A L + +H I G ++++E++L++ Y KC M +A +F + ++ +W
Sbjct: 225 ASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWT 284
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y G G EA + +M R+ + P + TF L ACS L +G +H +
Sbjct: 285 SMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTLE---QGKHLHEEVKAF 341
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
FE VV +L MY +CG LEDA L + +++ +SW+++V+ +A G +A LF
Sbjct: 342 GFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF 401
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+M +L G SL T L C+ + +
Sbjct: 402 RQM----------ILEGMQLSL---------------------PTFCSALQACSLKRDSR 430
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+ K + I + + L+ Y KCG++ AR F +M + RD ++W ++ GY
Sbjct: 431 LSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRM-ESRDVLTWTVMIKGY 489
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI-RNCYEIN 511
A++G S+ A+ F M+ E P TF ++L AC+N LE G+++H ++ +++
Sbjct: 490 AQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSN---LEDGREVHARILAAQGGKMS 546
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC-HNERGREALEVFGLMK 570
L+ +Y +C + A ++F ES I S I+ C + + + ++ + LM
Sbjct: 547 DFLGNGLINMYARCGSMRDARQIF-ESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMV 605
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
EG+ PD +T IL +C H G A +F + + + EHY+CM+ L CR G +
Sbjct: 606 NEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRL 665
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP-WAPF 681
E E+ ++ M P V L + C+ G A ++ APF
Sbjct: 666 DEAEELIS-MIDRPDVVTLNTMLAACKNQQDLHRGARTAAQMQSTESCAAPF 716
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 247/527 (46%), Gaps = 49/527 (9%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
YA +L+ + ++LH + + G+ + L +V Y KC + DA+ FD+I
Sbjct: 17 YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+KN WN+++ Y +G +EA+ +F KM DI P F FA+AL AC+ L +G +
Sbjct: 77 DKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQGRE 133
Query: 266 IHGVIIKIDFEGDDVVL-GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
IH +++ DVV+ SL MY +C G
Sbjct: 134 IHKRVLESRSIASDVVVQNSLVTMYARC-------------------------------G 162
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ E ++F+ MP +N++SWNAM++ + + ++AL+ M++ + + +L
Sbjct: 163 SVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLT 222
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA L +++G +H I +I + NAL++MY KCG + A F ++ RD
Sbjct: 223 ACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLAT-RDVF 281
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
+W +++ GYA+ G EA + M+ + P+ TF LL+AC S+LEQGK +H V
Sbjct: 282 TWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSAC---STLEQGKHLHEEV 338
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
+E V AL+ +Y++C LE A +F + D + ++M+ +AL
Sbjct: 339 KAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKAL 398
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC-MIK 622
+F M EG++ TF L AC + + +L+ + + + I +++ ++
Sbjct: 399 TLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELI--DWSGIDKMDSIRADLVS 456
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAA 669
Y + G M+E +RM + I GYA G+ A
Sbjct: 457 AYSKCGDMEEARKIFDRMESRDVLTWTVMI------KGYAQQGDSKA 497
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/657 (27%), Positives = 321/657 (48%), Gaps = 41/657 (6%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P +Y L HL L +S + + ARK+ V T + LNR + + +L A+
Sbjct: 34 DPATYRLELHLNYLVSSGR-LAAARKVLDQ-VPEKSTLYLRFLNRILLGCSRSCDLSAAK 91
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEE 156
LF R+ +W M+ +G + LF DM G S + +T VL +
Sbjct: 92 ALFSAAARRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCD 151
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ LH ++ K GF +V++ ++L+DAY K + ARR+F ++ +++++++N ++
Sbjct: 152 V-----GTLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMI 206
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
G EA+ +F M RE + +FTF++ L + + + G QIHG+ ++ +
Sbjct: 207 MGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPS 266
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ V +L + Y KC L D + L D+ ER+ +S+ ++S + + A +LF +M
Sbjct: 267 CNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDM 326
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
G+ R L +L L+V L IK+G+
Sbjct: 327 ----------QTLGFDRRTLPYASL---------------------LSVAGALPHIKIGR 355
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++H + + + FV NAL+DMY KCG L +A+ F S + +SW A++TG +
Sbjct: 356 QIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSD-KTAISWTALITGCVQN 414
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
GQ+EEA+ F +M+ P + T +++ + ++++ + G+Q+H ++ ++ + +V
Sbjct: 415 GQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSG 474
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
AL+++Y KC CL+ AIR F E + I N++I + + + A+ +F M G+
Sbjct: 475 SALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLC 534
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
PD +TF +L AC H G + +++FD MR Y + P EHY C+I R G +++
Sbjct: 535 PDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQK 594
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
++ MPF + I CR G L AA +L + P + I +N + +
Sbjct: 595 VIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSNIYAK 651
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/508 (29%), Positives = 252/508 (49%), Gaps = 51/508 (10%)
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV------RRYLVAGNGKEAVVMFF 233
L + LV+ Y K ++ A+ + + V+W ++ RR+L A++ F
Sbjct: 44 LSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFL------PALLHFT 97
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
M R++++P +FTF A +F+ P G QIHG+ +K D V S +MY K G
Sbjct: 98 NMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTG 157
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
RG +A +F+EMP+RN+ +WNA ++ +
Sbjct: 158 ----FRG---------------------------DACNMFDEMPQRNLATWNAYISNAVQ 186
Query: 354 SLLWKEALDFVFLMRK---TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ +LD + ++ + + +T LN C + + +G+++H FI R Y +
Sbjct: 187 D---RRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKED 243
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+ V+N L+D Y KCG++ SA + F ++ R++ VSW ++L + + E A F + +
Sbjct: 244 VSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQAR 303
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E P+ F ++L+ACA + LE G+ +H ++ C E N+ ALV++Y KC +E
Sbjct: 304 KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIEN 363
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK--KEGIKPDHITFHGILLAC 588
A +VF E +++ N+MI G+ H AL +F M GI+P ++T IL C
Sbjct: 364 AEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVC 423
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
G V+ +Q F+SMR YGI P EH+ C++ L R G + +F+ M PT+ +
Sbjct: 424 SRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISV 483
Query: 649 LRKIFDKCRKNGYATLGEWAARRLNELN 676
+ CR +G LG+ AA +L EL+
Sbjct: 484 WGALLGACRMHGKTELGKIAAEKLFELD 511
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 211/461 (45%), Gaps = 36/461 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTP-PVFLLNRAIECYGKCGNLDDARGLFD 101
+L L + S+ + R + ++++ + TP P FL N + Y K L+ A+ +
Sbjct: 7 NLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLS 66
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV 161
R +W +++ N L F +M V N T+ V ++SA
Sbjct: 67 LTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMT 126
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
KQ+HGL +K G +V + S D Y K DA MFD++ +N +WN + +
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQ 186
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+A+V F + L P + TF L AC + G Q+H I++ ++ D V
Sbjct: 187 DRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSV 246
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L + Y KCG IVS + RI +NV
Sbjct: 247 ANGLIDFYGKCG---------------------DIVSAEMVFNRIGN---------RKNV 276
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+SW +MLA ++ + A VFL + + + +L+ CA L +++G+ VH
Sbjct: 277 VSWCSMLAALVQNHEEERAC-MVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHAL 335
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ NIFV +AL+DMY KCG++ +A F ++ + R+ V+WNA++ GYA +G +
Sbjct: 336 AVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPE-RNLVTWNAMIGGYAHQGDIDM 394
Query: 462 AMTSFSEMQWET---RPSKFTFETLLAACANISSLEQGKQI 499
A+ F EM + RPS T ++L+ C+ + ++E+G QI
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQI 435
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 27/375 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP S + A L C + R+L + +V V + N I+ YGKCG++ A
Sbjct: 206 EPNSITFCAFL-NACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAE 264
Query: 98 GLFDEMPERDGG-SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ + R SW +ML A QN R +FL V ++VL + AE
Sbjct: 265 MVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAEL 323
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L + + +H L VK N+ + S+LVD YGKC + +A ++F ++ +N V+WN ++
Sbjct: 324 GGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMI 383
Query: 217 RRYLVAGNGKEAVVMFFKML--REDIRPLNFTFANALFACSFLSSPYEGMQI-HGVIIKI 273
Y G+ A+ +F +M IRP T + L CS + + G+QI + +
Sbjct: 384 GGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNY 443
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS-WTSIVSGYAISGRIR----E 328
E + ++ + G ++ A + + IS W +++ + G+
Sbjct: 444 GIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIA 503
Query: 329 ARELF--NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
A +LF + + N + + MLA R W+EA ++RK KDI G+ NV
Sbjct: 504 AEKLFELDHVDSGNHVVLSNMLASAGR---WEEAT----VVRKEMKDI-----GIKKNV- 550
Query: 387 AGLSEIKMGKEVHGF 401
G S I + +H F
Sbjct: 551 -GYSWIAVKNRIHVF 564
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 24/277 (8%)
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIWF 434
Q LG +L +G+ +H I R + F+SN L++MY K L SA+
Sbjct: 6 QNLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQ-HV 64
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
++ R V+W ++++G + A+ F+ M+ + +P+ FTF + A A +
Sbjct: 65 LSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIP 124
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY---------AIRVFKESSSLDVI 544
GKQIH ++ G + +V+ C C + A +F E ++
Sbjct: 125 MTGKQIHGLALKG---------GMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLA 175
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
N+ I + R +A+ F +P+ ITF L AC+ + L Q +
Sbjct: 176 TWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFI 235
Query: 605 -RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
RC Y + +I Y + G + E NR+
Sbjct: 236 VRCGYK--EDVSVANGLIDFYGKCGDIVSAEMVFNRI 270
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K EP + + + + CA + R + + V +F+ + ++ YGKCG+++
Sbjct: 304 KEVEPTDF-MISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIE 362
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN--HSGVSANQITYANVL 150
+A +F E+PER+ +WNAM+G Y G L LF +M G+ + +T ++L
Sbjct: 363 NAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISIL 420
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/592 (29%), Positives = 282/592 (47%), Gaps = 35/592 (5%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
+ G +DDA+ RD N ++ G PG L + M +G ++ T+
Sbjct: 52 HAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTF 111
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQ 205
VL+ A L + H ++ G +V +SL+ Y + ++ DA R+FD +
Sbjct: 112 PVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMP 171
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGM 264
++ V+WN +V Y+ G G A+V F +M +++ AL AC S+ +G
Sbjct: 172 ARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGR 231
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++H +I+ E D V S+ +MY KCG
Sbjct: 232 EVHAYVIRHGMEHDVKVGTSILDMYCKCGD------------------------------ 261
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
I A +F MP R V++WN M+ GY + +EA D M+ ++ VT +L
Sbjct: 262 -IASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLA 320
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA G+ VHG+I R + ++ + ALL+MY K G ++S+ F QM+ + V
Sbjct: 321 ACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTK-TLV 379
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWN ++ Y + EA+T F ++ P FT ++ A + L Q +Q+H ++
Sbjct: 380 SWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYI 439
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
IR Y N + A++ +Y +C + + +F + ++ DVI N+MI+G+ + +GR AL
Sbjct: 440 IRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSAL 499
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
E+F MK G++P+ TF +L AC G F+SM+ YG+IPQ+EHY CM L
Sbjct: 500 EMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDL 559
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
R G +KE+ F+ MP +PT + + R + E+AA R+ +L
Sbjct: 560 LGRAGDLKEVMQFIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQL 611
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 208/452 (46%), Gaps = 35/452 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTF-YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+ + CA A+ E R S + V+ N + Y + G +DDA +FD MP R
Sbjct: 114 VLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPAR 173
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELGVSKQL 165
D +WN+M+ Y NG L F +M+ + V + + L + E L +++
Sbjct: 174 DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREV 233
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +++ G +V + +S++D Y KC + A +F + ++ V+WN ++ Y +
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+EA F +M E + T N L AC+ S G +HG I + F V+ +L
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETAL 353
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
EMY K G+++ + + Q + ++SW N
Sbjct: 354 LEMYSKVGKVKSSEKVFGQMTTKTLVSW-------------------------------N 382
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
M+A Y ++ EA+ + D T+ ++ L ++ +++H +I R
Sbjct: 383 NMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRL 442
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
Y N + NA++ MY +CG++ S+R F +M+ +D +SWN ++ GYA GQ A+
Sbjct: 443 GYGENTLIMNAIMHMYARCGDVLSSREIFDKMAA-KDVISWNTMIMGYAIHGQGRSALEM 501
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
FSEM+ RP++ TF ++L AC+ ++G
Sbjct: 502 FSEMKCNGLRPNESTFVSVLTACSVSGLTDEG 533
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 199/430 (46%), Gaps = 34/430 (7%)
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
SLV ++ M DA+ +++A NV++R AG A+ + ML RP
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGL 301
FTF L C+ L + EG H I++ DV G SL Y + G ++DA +
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 302 LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
D R++++W S+V GY +G A F EM EAL
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREM---------------------HEAL 205
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
+ D V + L C S + G+EVH ++ R+ ++ V ++LDMY
Sbjct: 206 EVQH---------DGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMY 256
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTF 480
KCG++ SA F M R V+WN ++ GYA + EEA F +M+ E + T
Sbjct: 257 CKCGDIASAEGVFATMPS-RTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTA 315
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
LLAACA S G+ +H ++ R + +VV AL+E+Y+K ++ + +VF + ++
Sbjct: 316 INLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTT 375
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
++ N+MI + + E EA+ +F + + + PD+ T ++ A + G ++ Q
Sbjct: 376 KTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQM 435
Query: 601 FDS-MRCKYG 609
+R YG
Sbjct: 436 HSYIIRLGYG 445
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 152/329 (46%), Gaps = 5/329 (1%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S+V +A +GR+ +A+E R+ N ++ G + L AL M
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVH-GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+ T ++L CA L + G+ H I +++++ N+LL Y + G + A
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANIS 491
F M R D V+WN+++ GY G A+ F EM E + LAAC S
Sbjct: 167 FDGMPAR-DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
+L QG+++H +VIR+ E +V +++++Y KC + A VF S V+ N MI
Sbjct: 226 ALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIG 285
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
G+ NER EA + F MK EG + + +T +L AC + L + + +
Sbjct: 286 GYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACA-QTESSLYGRSVHGYITRRQFL 344
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRM 640
P + ++++Y + G +K E +M
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQM 373
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 132/281 (46%), Gaps = 14/281 (4%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
+L CA +++ + R + + P V L +E Y K G + + +F +M +
Sbjct: 317 NLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTK 376
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
SWN M+ AY + LFLD+ + + + T + V+ + L +Q+H
Sbjct: 377 TLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMH 436
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
I++ G+ N ++ ++++ Y +C + +R +FD + K+ +SWN ++ Y + G G+
Sbjct: 437 SYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGR 496
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG-------MQIHGVIIKIDFEGDD 279
A+ MF +M +RP TF + L ACS EG + +G+I +I+
Sbjct: 497 SALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEH---- 552
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSG 319
G +T++ + G L++ ++ P + W S+++
Sbjct: 553 --YGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTA 591
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 278/562 (49%), Gaps = 44/562 (7%)
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAY 188
+LF + +G +N V+ A+ + QLH I++ GF NV + S++VD Y
Sbjct: 55 DLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMY 114
Query: 189 GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
KC + A +F+++ +N V+WN ++ YL VM +R +F+ +
Sbjct: 115 AKCSEIQSAHEVFNEMPERNDVTWNSLIFGYLN--------VMPTCAMRG---VTSFSVS 163
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L CS L G Q+HG+ +K+ F+ + V +L +MY KC ++D
Sbjct: 164 TCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDD----------- 212
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
SW +F+ M ++NV++W AM+ Y ++ EA+ V M
Sbjct: 213 ---SW-----------------RVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMM 252
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ + VT +L+ +G ++ K+VH I R N++++ L+ +Y KC N
Sbjct: 253 RLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNL 312
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAAC 487
Q D++SWNAV+ GY+ G E+A+ F EM+ F TF +LL A
Sbjct: 313 EDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAI 372
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
++E+G+++H +++ Y +V + LV +Y +C ++ + RVF DV+ N
Sbjct: 373 GAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWN 432
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+++ G H+ G EA+E+F M+K IKP+ TF +L AC H G+V L++FD MR
Sbjct: 433 ALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSD 492
Query: 608 YGIIP-QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+ P ++EHY ++ ++ R GY+ E E +N MP +P + + + C +G +
Sbjct: 493 ISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAV 552
Query: 667 WAARRLNELNPWAPFQFKITTN 688
+AR+L EL P P + + +N
Sbjct: 553 RSARKLLELWPDDPATYILLSN 574
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 229/478 (47%), Gaps = 50/478 (10%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAH-LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
+T + HL + S + + + CA + +L S ++ T V + +
Sbjct: 50 QTFDSDLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSA 109
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
++ Y KC + A +F+EMPER+ +WN+++ Y N P + GV++
Sbjct: 110 VVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLIFGYL-NVMPTCAMR--------GVTSF 160
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
++ V+ S E G Q+HGL +K GF NV + ++L+D Y KC + D+ R+FD
Sbjct: 161 SVSTCLVVCSQLEVRNFGA--QVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFD 218
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+ +KN V+W +V Y EA+++ +M+R I+ N+ N+L + SF Y
Sbjct: 219 YMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKA-NYVTYNSLLS-SFSGPKYM 276
Query: 263 GM--QIHGVIIKIDFEGDDVVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSG 319
Q+H II+ E + + +L +Y KC LED + + ISW ++++G
Sbjct: 277 QYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAG 336
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y+ G +A + F EM N+ +D T
Sbjct: 337 YSNLGLGEDALKCFCEMRHANI-------------------------------KMDFYTF 365
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+L I+ G+E+H I + Y+S+++V N L+ MY +CG + ++ F+ M +
Sbjct: 366 TSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLM-E 424
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
D VSWNA+LTG A G EA+ F +M + + +P+ TF +L+AC+++ S+++G
Sbjct: 425 DHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKG 482
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 188/407 (46%), Gaps = 36/407 (8%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ I+ Y KC +DD+ +FD M +++ +W AM+ AY QN P + L +M
Sbjct: 194 VFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMR 253
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM-VMT 195
G+ AN +TY ++L S + + KQ+H I++ G N+ + ++LV Y KC +
Sbjct: 254 LGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLE 313
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
D ++ +Q + +SWN ++ Y G G++A+ F +M +I+ +TF + L A
Sbjct: 314 DFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIG 373
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
+ EG ++H +I+K + V L MY +CG ++D++ + ++ +++SW +
Sbjct: 374 AFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNA 433
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
+++G A G EA ELF + MRKT +
Sbjct: 434 LLTGCAHHGFGNEAVELFEQ-------------------------------MRKTKIKPN 462
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN--ALLDMYRKCGNLRSARIW 433
T +L+ C+ + + G E F+ + + V + +++D++ + G L A
Sbjct: 463 STTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAI 522
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKF 478
M + A+L+ G E A+ S ++ W P+ +
Sbjct: 523 INCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATY 569
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 151/309 (48%), Gaps = 29/309 (9%)
Query: 77 VFLLNRAIECYGKC-GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+++ + Y KC NL+D + + D SWNA++ Y+ G L+ F +M
Sbjct: 295 LYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMR 354
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
H+ + + T+ ++L + L + +++H LIVK G+ +V +++ LV Y +C +
Sbjct: 355 HANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAID 414
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
D++R+F +++ + VSWN ++ G G EAV +F +M + I+P + TF L ACS
Sbjct: 415 DSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACS 474
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVL--------GSLTEMYVKCGRLEDARGLLD-QPD 306
+ S +G++ DF D+ L S+ +++ + G L +A +++ P
Sbjct: 475 HVGSVDKGLEY------FDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPM 528
Query: 307 ERNIISWTSIVSGYAISGR----IREARELFNEMPE--RNVISWNAMLA--GYTRSLLWK 358
+ + +++S + G +R AR+L P+ I + MLA GY W
Sbjct: 529 DPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGY-----WD 583
Query: 359 EALDFVFLM 367
+A D LM
Sbjct: 584 DAADVRKLM 592
>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/723 (25%), Positives = 318/723 (43%), Gaps = 110/723 (15%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC-----YGKCGNLDDARG 98
+Y + Q C + + +++ + ++ ++ N IE Y KC +L+ A
Sbjct: 61 IYGEILQGCVYERDLCTGKQIHARIL---KNGDLYARNEYIETKLVIFYAKCDDLEIAEV 117
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LF ++ R+ SW A++G + G L F++M + + + NV ++
Sbjct: 118 LFSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQW 177
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ +HG ++K G V + SSL D YGKC V+ DAR++FD+I +N V+WN ++
Sbjct: 178 SRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVG 237
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ G +EA+ + M ++ + P T + L A + ++ EG Q H + I E D
Sbjct: 238 YVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELD 297
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+++ SL Y K G +E A +F+ M E
Sbjct: 298 NILGTSLLNFYCKVGLIE-------------------------------YAEMIFDRMFE 326
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V++WN +++GY + L ++A+ LMR D VTL +++ A +K+GKEV
Sbjct: 327 KDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 386
Query: 399 HGFIHRNDYSSNIFVS-------------------------------NALLDMYRKCGNL 427
R+ S+I ++ N LL Y + G+
Sbjct: 387 QCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHS 446
Query: 428 RSARIWFYQM-----------------SQRRDK---------------------VSWNAV 449
A FY+M S+ R+ +SW +
Sbjct: 447 GEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQMQSSGITPNLISWTTM 506
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC- 507
+ G + G SEEA+ +MQ RP+ F+ L+A AN++S G+ IH ++IRN
Sbjct: 507 MNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLR 566
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ + +LV++Y KC + A RVF+ S ++ + N+MI + EA+ ++
Sbjct: 567 HSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYALXGNVTEAVALYR 626
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
++ G KPD ITF +L AC H G++ A++ F M +G+ P LEHY ++ L+
Sbjct: 627 SLEDMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLVDLFASA 686
Query: 628 GYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITT 687
+ + MP+ P M++ + C K L ++ +R+L E P + +
Sbjct: 687 KETDKALRLMEEMPYKPDXRMIQSLVASCNKQHKTELVDYLSRQLLETEPEXSGNYVTIS 746
Query: 688 NRF 690
N +
Sbjct: 747 NAY 749
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 152/553 (27%), Positives = 266/553 (48%), Gaps = 37/553 (6%)
Query: 99 LFDEMPERDGG-SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
L DE P+ S+ + + +NG L L +M+ + Y +L+ E
Sbjct: 14 LHDEQPQAPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYER 73
Query: 158 ELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+L KQ+H I+K G + N +E+ LV Y KC + A +F ++ +N SW I
Sbjct: 74 DLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAI 133
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
+ G + A++ F +ML +I P NF N AC L G +HG ++K
Sbjct: 134 IGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGL 193
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E V SL +MY KCG L+DAR ++F+E
Sbjct: 194 EDCVFVASSLADMYGKCGVLDDAR-------------------------------KVFDE 222
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+PERNV++WNA++ GY ++ + +EA+ + MRK + +VT+ L+ A ++ ++ G
Sbjct: 223 IPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEG 282
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ H N + + +LL+ Y K G + A + F +M ++ D V+WN +++GY +
Sbjct: 283 TQCHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEK-DVVTWNLLISGYVQ 341
Query: 456 RGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+G E+A+ M+ E + T TL++A A +L+ GK++ C R+ E ++V
Sbjct: 342 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVL 401
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+++Y KC + A +VF + D+I+ N+++ + + EAL +F M+ E +
Sbjct: 402 ASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESV 461
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
P+ IT++ I+L+ + V A + F M+ GI P L + M+ + G +E
Sbjct: 462 PPNVITWNLIILSRLRNAEVNEAKEMFLQMQSS-GITPNLISWTTMMNGMVQNGCSEEAI 520
Query: 635 DFVNRMPFNPTVP 647
F+ +M + P
Sbjct: 521 HFLRKMQESGMRP 533
>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/593 (25%), Positives = 291/593 (49%), Gaps = 35/593 (5%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y K G++ A +F+ + E D G WNAM+G Y Q G+ + M G+ ++ T+
Sbjct: 200 YAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTF 259
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
NV++ + + +Q+HGLI++ + + ++L+D Y K M +F + +
Sbjct: 260 INVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHD 319
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V+WN + + + K+ +F L +RP + TF+ C L + G+Q
Sbjct: 320 RDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQF 379
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
+ + + + +L M+ +CG++E A + NII W ++SGY ++
Sbjct: 380 CCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCD 439
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA + F ++ + V + ++ T +L C
Sbjct: 440 AEALKTFYDLLQLGV-------------------------------EANEYTFSNVLETC 468
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ M +++HG ++ ++S+ +V ++L+ Y KCG L + + + M R D +W
Sbjct: 469 SRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDS-LKVFNMLDRPDMAAW 527
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+++ + +G EA+ S + + + +P +F ++L++CA+ + Q K +H +I+
Sbjct: 528 GTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIK 587
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKES-SSLDVIICNSMILGFCHNERGREALE 564
+E +V A+++ Y KC ++ A F +S S DV+I N+MI+ + H+ R EAL+
Sbjct: 588 LGFEGHVFVASAVLDAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALD 647
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
+ MK ++P TF ++ AC H G+V+ + F SM YG+ P + Y C++ ++
Sbjct: 648 TYDKMKLANLQPSQATFVSVIAACGHIGHVEKGCRLFKSMDL-YGMEPSPDIYGCLVDMF 706
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R GY+++ + + +P+ +LR + CR G LGEWAA++L +L P
Sbjct: 707 SRNGYLEDAKQIIESLPYPAWPAILRSLLSGCRMYGNRELGEWAAKKLLQLVP 759
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 227/464 (48%), Gaps = 34/464 (7%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
+ PV +N ++ Y K G + +F +M +RD +WN + G+++Q+ P LF
Sbjct: 290 SAPV--MNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHS 347
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
+ + N IT++ + R + L L + Q L + G + S+L++ + +C
Sbjct: 348 FLLTSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGK 407
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
M A +F ++N + WN ++ Y + EA+ F+ +L+ + +TF+N L
Sbjct: 408 MEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLET 467
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
CS + QIHGV K F V SL + Y+KCG L+D+ + + D ++ +W
Sbjct: 468 CSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAW 527
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+++S + G W+ EA+ + L+ + +
Sbjct: 528 GTMISAFVHQG-------------------WDC------------EAIRSLNLLIEAGEK 556
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D+ LG IL+ CA K VH I + + ++FV++A+LD Y KCG+++SA++
Sbjct: 557 PDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAKMA 616
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F Q + D V +NA++ YA G+ EA+ ++ +M+ +PS+ TF +++AAC +I
Sbjct: 617 FNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHIGH 676
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
+E+G ++ + E + G LV+++++ LE A ++ +
Sbjct: 677 VEKGCRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIE 720
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/582 (23%), Positives = 252/582 (43%), Gaps = 42/582 (7%)
Query: 9 LKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNL 68
LKN+ SP T S + SG + V+ S C +SK+ + ++ +
Sbjct: 28 LKNLHQLYSPISTKS-----SCSGFFIGKDSVALS---KALSFCENSKSFILGTQIHGYI 79
Query: 69 VTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTL 128
+ + VF+ N I+ Y K L +FD M ER+ SW M+ Q L
Sbjct: 80 IKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELGL 139
Query: 129 ELFLDMNHSGVSANQITYANVLRSSAEELELGV-SKQLHGLIVKRGFCGNVILESSLVDA 187
E+FL+M G N+ +V+++ +E V +H +K G N + S++
Sbjct: 140 EVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSF 199
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K + A R+F+ ++ + WN ++ Y G G EA+V M R+ I +TF
Sbjct: 200 YAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTF 259
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
N + CS L G QIHG+II+ + E V+ +L +MY K G ++ + + +
Sbjct: 260 INVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHD 319
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
R++++W ++ ++ ++ LF+ FL+
Sbjct: 320 RDVVTWNTVFGSFSQHEDPKDIASLFHS-----------------------------FLL 350
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
T+ + +T ++ C L + +G + +++AL++M+ +CG +
Sbjct: 351 --TSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKM 408
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAA 486
A + F + + + WN +++GY EA+ +F + +Q +++TF +L
Sbjct: 409 EMAHLVF-KSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLET 467
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
C+ + +QIH ++ + + +L++ Y KC L+ +++VF D+
Sbjct: 468 CSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAW 527
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+MI F H EA+ L+ + G KPD IL +C
Sbjct: 528 GTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSC 569
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D V L L+ C +G ++HG+I + +SS++FVSN L+ Y K LR F
Sbjct: 52 DSVALSKALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVF 111
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACAN-ISS 492
M +R + VSW ++ G + + E + F EM + P++F +++ AC N +
Sbjct: 112 DGMLER-NVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEG 170
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G +HCF ++ E N +++ Y K + A RVF+ +DV N+MI G
Sbjct: 171 RVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGG 230
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
+ G EA+ LM+++GI D TF ++ C G+ Q
Sbjct: 231 YAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQ 277
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
++L I K DE + S+ + CAS+ A + + + S ++ VF+ +
Sbjct: 545 RSLNLLIEAGEKPDEFILGSILSS----CASTVAYCQTKSVHSLIIKLGFEGHVFVASAV 600
Query: 84 IECYGKCGNLDDARGLFDE-MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
++ Y KCG++ A+ F++ D +NAM+ AY +G L+ + M + + +
Sbjct: 601 LDAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPS 660
Query: 143 QITYANVLRSSAE--ELELGV----SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
Q T+ +V+ + +E G S L+G+ G LVD + + + D
Sbjct: 661 QATFVSVIAACGHIGHVEKGCRLFKSMDLYGMEPSPDIYG------CLVDMFSRNGYLED 714
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYL 220
A+++ + + +W I+R L
Sbjct: 715 AKQIIESLPYP---AWPAILRSLL 735
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 280/615 (45%), Gaps = 86/615 (13%)
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN-------------- 206
+++ +H I+ GF N + + L++ Y K +T AR++FD I
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 207 -------------------KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
++ VS+N ++ Y +G A+ +F +M R P FTF
Sbjct: 83 SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142
Query: 248 ANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGR---------LED 297
++ L A S ++ Q +H +IK+ V +L YV C +
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202
Query: 298 ARGLLDQPDERNII--SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
AR + D+ + I SWT++++GY + + AREL + + ++WNAM++GY R
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE----IKMGKEVHGFIHRN----DY 407
L++EA D M D+ T +++ C +E G++VHG+I R +
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ V+NAL+ Y K + AR F +M R D +SWNAVL+GY + EEA + FS
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSGYVNAQRIEEANSIFS 381
Query: 468 EM------QWET--------------------------RPSKFTFETLLAACANISSLEQ 495
EM W P + F + AC+ + SL+
Sbjct: 382 EMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDN 441
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G+QIH VIR ++ + AL+ +Y++C +E A VF +D + N+MI
Sbjct: 442 GQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQ 501
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G +A+E+F M KE I PD ITF IL AC H G +K +FD+M +YGI P +
Sbjct: 502 HGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGED 561
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY +I L CR G + + + MPF P+ + CR +G LG AA RL EL
Sbjct: 562 HYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLEL 621
Query: 676 NPWAPFQFKITTNRF 690
P + I +N +
Sbjct: 622 IPGQDGTYIILSNMY 636
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 240/539 (44%), Gaps = 86/539 (15%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y +L QL S + AR + ++++T P F+LNR I Y K N+ AR LFD++P
Sbjct: 8 YRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIP 67
Query: 105 E---------------------------------RDGGSWNAMLGAYTQNGFPGRTLELF 131
+ RD S+NAM+ AY+ L LF
Sbjct: 68 KPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLF 127
Query: 132 LDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
+ M G + T+++VL + S E + LH ++K G + ++L+ Y
Sbjct: 128 VQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVC 187
Query: 191 C---------MVMTDARRMFDD------------------IQNKNA-------------- 209
C +M AR++FD+ ++N +
Sbjct: 188 CASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPI 247
Query: 210 -VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE----GM 264
V+WN ++ Y+ G +EA F +M I+ +T+ + + AC + G
Sbjct: 248 DVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGR 307
Query: 265 QIHGVIIKIDFEGDD----VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
Q+HG I++ E V +L Y K R+ +AR + D+ R+IISW +++SGY
Sbjct: 308 QVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGY 367
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+ RI EA +F+EMPERNV++W M++G ++ +E L M+ +
Sbjct: 368 VNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFA 427
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+ C+ L + G+++H + R + S + NAL+ MY +CG + SA F M
Sbjct: 428 GAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY- 486
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
D VSWNA++ A+ G +A+ F +M E P + TF T+L AC + +++G+
Sbjct: 487 VDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 210/492 (42%), Gaps = 87/492 (17%)
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
D+R L + + L S ++ +H I+ F+ + +L L +Y K + A
Sbjct: 2 DVRDLAYRYLTQLNHVS--TTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYA 59
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE--RNVISWNAMLAGYTRSLL 356
R L D+ + +I++ T+++S Y+ SG ++ A++LFN P R+ +S+NAM+ Y+
Sbjct: 60 RKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGND 119
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS-EIKMGKEVHGFIHRNDYSSNIFVSN 415
AL+ M++ D T +L+ + ++ E + + +H + + V+N
Sbjct: 120 GHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTN 179
Query: 416 ALLDMYRKCGN---------LRSARIWFYQMSQ----------------RRD-------- 442
ALL Y C + + SAR F + + R D
Sbjct: 180 ALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAAREL 239
Query: 443 --------KVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN---- 489
V+WNA+++GY RRG EEA +F M + ++T+ +L++AC +
Sbjct: 240 LDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEK 299
Query: 490 ISSLEQGKQIHCFVIRNCYEIN----VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
+ G+Q+H +++R E + + AL+ YTK + A RVF + D+I
Sbjct: 300 MGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIIS 359
Query: 546 CNSMILGFCHNER-------------------------------GREALEVFGLMKKEGI 574
N+++ G+ + +R G E L++F MK EG+
Sbjct: 360 WNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGL 419
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+P F G + AC G++ Q S + G L +I +Y R G ++ E
Sbjct: 420 EPCDYAFAGAITACSVLGSLDNGQQ-IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAE 478
Query: 635 DFVNRMPFNPTV 646
MP+ +V
Sbjct: 479 SVFLTMPYVDSV 490
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 15/320 (4%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
++EAR++ + P + N + Y +++A +F EMPER+ +W M+
Sbjct: 342 MIEARRVFDKM----PVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISG 397
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
QNGF L+LF M G+ +A + + + L +Q+H +++ G
Sbjct: 398 LAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSG 457
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
+ ++L+ Y +C V+ A +F + ++VSWN ++ G+G +A+ +F +M++
Sbjct: 458 LSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMK 517
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-IKIDFEGDDVVLGSLTEMYVKCGRLE 296
EDI P TF L AC+ EG + + + L ++ + G
Sbjct: 518 EDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFL 577
Query: 297 DARGLL-DQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERN--VISWNAMLA 349
A+ ++ P E W ++++G I G I+ A L +P ++ I + M A
Sbjct: 578 KAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYA 637
Query: 350 GYTRSLLWKEALDFVFLMRK 369
+ W E LMR+
Sbjct: 638 ALGQ---WDEVARVRLLMRE 654
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/515 (30%), Positives = 251/515 (48%), Gaps = 34/515 (6%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H I+ GF N+ L + L+ Y K AR++FD + + VSW+ + Y G
Sbjct: 19 IHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGC 78
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
++A+++F MLR + FT+ + L AC+ L GMQI G + K F + +V +
Sbjct: 79 YQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSA 138
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +++ KCG++ED A LF M ER+V+SW
Sbjct: 139 LLDLHSKCGKMED-------------------------------ASYLFGMMEERDVVSW 167
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
NA++ Y ++ M + D T G +L S++ ++H I +
Sbjct: 168 NAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQ 227
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ-SEEAM 463
Y S+I +S +L+D Y KC +L SA + M + D +S A++TGYAR S +A+
Sbjct: 228 LGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMK-DMISCTALMTGYARDSNYSSKAL 286
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F E+Q + ++ CANISSL G+QIH ++ +V AL+++Y
Sbjct: 287 DLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMY 346
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
K ++ A R F E +VI S+I G+ + G EA+ +F M+ EG+KP+ ITF
Sbjct: 347 AKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFL 406
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G + F++M KY I+P+ EH+ CM+ L+ R G ++E + +N+M
Sbjct: 407 SLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNI 466
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + I C G L E AA L +++P
Sbjct: 467 KPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDP 501
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 260/551 (47%), Gaps = 67/551 (12%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
QLC +KA + + ++T + L + I Y K G+ AR +FD MPER
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
SW+A + Y+QNG L +FLDM +G ANQ TY +VLR+ L Q+ G
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+ K F N+I++S+L+D + KC M DA +F ++ ++ VSWN I+ Y V G ++
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
MF M++E + P FTF + L A S QIH +II++ + + GSL +
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYA-ISGRIREARELFNEMPERNVISWNAM 347
Y KC L A L +++IS T++++GYA S +A +LF E+ + ++
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHM------ 297
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
ID V L + N+CA +S + +G+++H +
Sbjct: 298 -------------------------KIDDVILCSMFNICANISSLSVGRQIHALALKCKP 332
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+ ++ + NAL+DMY K G ++ A F +M + ++ +SW +++TGY G EA+ F
Sbjct: 333 TYDVAMGNALIDMYAKSGEIKDANRAFNEM-EEKNVISWTSLITGYGSHGHGHEAIALFK 391
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
+M++E +P+ TF +LL AC HC + +E C ++ Y
Sbjct: 392 KMEYEGLKPNDITFLSLLFACN-----------HCGLTGEGWE----CFNNMISKYN--- 433
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
R S +D+ RG E + L+ K IKP+ + IL
Sbjct: 434 ---ILPRAEHFSCMVDLF------------ARGGLLEEAYNLINKMNIKPNASLWGAILG 478
Query: 587 ACIHEGNVKLA 597
AC GN+ LA
Sbjct: 479 ACYIYGNMPLA 489
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 8/293 (2%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMNHSGVSAN 142
I+ Y KC +L A L+ MP +D S A++ Y ++ + + L+LF ++ + +
Sbjct: 241 IDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKID 300
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ ++ A L V +Q+H L +K +V + ++L+D Y K + DA R F+
Sbjct: 301 DVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFN 360
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
+++ KN +SW ++ Y G+G EA+ +F KM E ++P + TF + LFAC+ E
Sbjct: 361 EMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGE 420
Query: 263 GMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWTSIVSGY 320
G + + +I K + + +++ + G LE+A L+++ + + N W +I+
Sbjct: 421 GWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGAC 480
Query: 321 AISGRIREARE----LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
I G + A E LF PE N +++ + Y + W A LM +
Sbjct: 481 YIYGNMPLAEEAAIHLFKMDPE-NSVNYVVLADIYAAAGSWDNAWKMRKLMEE 532
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
H+K D+ + S+ F +CA+ ++ R++ + + PT V + N I+ Y K G
Sbjct: 296 HMKIDDVILCSM----FNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGE 351
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ DA F+EM E++ SW +++ Y +G + LF M + G+ N IT+ ++L +
Sbjct: 352 IKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFA 411
Query: 153 SAEELELGVSKQ----LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK- 207
G++ + + +I K S +VD + + ++ +A + + + K
Sbjct: 412 CN---HCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKP 468
Query: 208 NAVSWNVIVRRYLVAGN---GKEAVVMFFKMLREDIRPLNFTFANALFACS 255
NA W I+ + GN +EA + FKM E+ +N+ ++A +
Sbjct: 469 NASLWGAILGACYIYGNMPLAEEAAIHLFKMDPEN--SVNYVVLADIYAAA 517
>gi|357128364|ref|XP_003565843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Brachypodium distachyon]
Length = 728
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/626 (29%), Positives = 306/626 (48%), Gaps = 50/626 (7%)
Query: 73 PTPPVFLL---NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
P P+ LL N ++ + G L DA LFD P RD S++A+L + G +
Sbjct: 33 PQSPLLLLQDLNARLKRLVQSGRLADAHSLFDGAPHRDEASYSALLAGHAAAGDFAGAMA 92
Query: 130 LFLDMNHSGVSANQITYAN------VLRSSAEE--LELGVSKQLHGLIVKRGFCGNVILE 181
LF+ + + S+ + A+ V ++SA + L L + LH V+ +V +
Sbjct: 93 LFVRLRRTSSSSRPLDAADPFVLSLVFKASAADPGLLLPHAASLHAFAVRSSALSSVFVA 152
Query: 182 SSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
++L DAY K + A R+FD++ +N VSW +V AG +A+ F +M
Sbjct: 153 TALADAYAKAGRLALALRVFDEMPAARRNVVSWTTLVAALSRAGRRHDALRAFAEMR--- 209
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
A+A AC H + D +L E++ C +L
Sbjct: 210 --------ASAGVAC----------DSHAYAAALTACADAGMLSRGREVHALCAKL---- 247
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
GL P N ++ + YA G + A M R+V +W +++ Y ++ KE
Sbjct: 248 GLDATPYVAN-----TLATLYARWGDVGRALAAVGRMGSRDVAAWTTVISSYVQTGRAKE 302
Query: 360 ALD-FVFLMRKTTKDI---DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
A++ FV ++R + ++ T ++ CA S + +G+++HG + + ++S V+N
Sbjct: 303 AIEAFVAMVRNEAVNAASPNEYTYAAVIAACADTSCVCLGEQLHGQVAQRGFASARSVAN 362
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--T 473
+L+ +Y + SA +Q S +D VSW+A+++GYA+ G + EA F+EM+
Sbjct: 363 SLVTLYARVAGRLSAADAVFQESAAKDVVSWSAIISGYAQEGLAGEAFALFTEMRRHHCP 422
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
RP++FT +LL+ CA ++L+ G+Q+H V+ E + + R ALV++Y K + A
Sbjct: 423 RPNEFTLASLLSVCATAATLDAGRQLHALVMAAGLEHHAMIRSALVDMYGKSGSMSDADV 482
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF + DV+ +MI+G + + + ALE+F M G+KPDH+ F G+L AC H G
Sbjct: 483 VFSNRTKDDVVSWTAMIVGHAEHGQSKRALELFEEMCLVGLKPDHVAFIGVLSACCHAGE 542
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML-RKI 652
V+L L++ +M YG+ P EHY C++ L R G + E E+ + RM N ++ +
Sbjct: 543 VELGLRYLSAMSKIYGLEPAKEHYGCVVDLLGRAGRINEAEELIGRMAANERDGVVWTSL 602
Query: 653 FDKCRKNGYATLGEWAARRLNELNPW 678
C G G+ AA R E PW
Sbjct: 603 LRACAARGEEETGKKAAARAMEAEPW 628
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/603 (29%), Positives = 286/603 (47%), Gaps = 42/603 (6%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V++ + Y K G + A+ LFDEMPERD WNA++ Y++NG+ +LF+ M
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
G S + T N+L + + + +HG+ K G + ++++L+ Y KC +
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F ++++K+ VSWN ++ Y +G +EA+ +F M +++ T N
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN------L 258
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
LS+ +H +++K D V+ SL Y +CG L A L + +I+ TSI
Sbjct: 259 LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
VS YA G + A F++ TR L K ID
Sbjct: 319 VSCYAEKGDMDIAVVYFSK----------------TRQLCMK---------------IDA 347
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
V L IL+ C S I +G +HG+ ++ + V N L+ MY K ++ + F Q
Sbjct: 348 VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ 407
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLE 494
+ Q +SWN+V++G + G++ A F +M P T +LLA C+ + L
Sbjct: 408 L-QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 495 QGKQIHCFVIRNCYE-INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
GK++H + +RN +E N VC AL+++Y KC A VFK + NSMI G+
Sbjct: 467 LGKELHGYTLRNNFENENFVCT-ALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGY 525
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ AL + M+++G+KPD ITF G+L AC H G V F +M ++GI P
Sbjct: 526 SLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
L+HY M+ L R E + +M P + + C + +GE+ AR++
Sbjct: 586 LQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMF 645
Query: 674 ELN 676
L+
Sbjct: 646 MLD 648
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 215/488 (44%), Gaps = 44/488 (9%)
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR---SSAEELELGVS 162
RD ++++L + + +F D+ S ++ N T + L+ +S +L V
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQV- 69
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
+Q+ + K G V +++SL++ Y K +T A+ +FD++ ++ V WN ++ Y
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +A +F ML++ P T N L C +G +HGV K E D V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L Y KC L A L + +++ +SW +++ Y+ SG EA +F M E+NV
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV- 248
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+I VT I+N+ LS + +H +
Sbjct: 249 ------------------------------EISPVT---IINL---LSAHVSHEPLHCLV 272
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ ++I V +L+ Y +CG L SA Y +++ V ++++ YA +G + A
Sbjct: 273 VKCGMVNDISVVTSLVCAYSRCGCLVSAE-RLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ FS+ Q + +L C S ++ G +H + I++ + L+ +
Sbjct: 332 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM 391
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHIT 580
Y+K +E + +F++ +I NS+I G + R A EVF +M G+ PD IT
Sbjct: 392 YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAIT 451
Query: 581 FHGILLAC 588
+L C
Sbjct: 452 IASLLAGC 459
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 170/360 (47%), Gaps = 14/360 (3%)
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
+R + TS+++ Y G + A+ LF+EMPER+ + WNA++ GY+R+ +A +
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
M + TL +L C + G+ VHG ++ + V NAL+ Y KC
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA 485
L SA + F +M + + VSWN ++ Y++ G EEA+T F M + S T LL+
Sbjct: 202 LGSAEVLFREM-KDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 486 ACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVII 545
A++S + +HC V++ ++ +LV Y++C CL A R++ + ++
Sbjct: 261 --AHVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVG 314
Query: 546 CNSMILGFCHNERGREALEV--FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
S++ C+ E+G + V F ++ +K D + GIL C ++ + +
Sbjct: 315 LTSIV--SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS-LHG 371
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT 663
K G+ + +I +Y ++ ++ + ++ P + + C ++G A+
Sbjct: 372 YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW-NSVISGCVQSGRAS 430
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 289/559 (51%), Gaps = 32/559 (5%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
G L AR +FD +P D ++NA++ AY+ G ++L+ M + V N+ T+ VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 151 RSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
++ + +L + +H G ++ + ++L+D Y +C A +F + ++ V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+WN ++ Y G A+ M R +RP NA S L S + HG
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRP------NA----STLVSLLPLLAQHGA 216
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+ F+G T ++ C R LDQ +E+ +I T+++ YA + A
Sbjct: 217 L----FQG--------TSVHAYC-----LRAYLDQNEEQVLIG-TALLDMYAKCKHLVYA 258
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAG 388
+F+ M RN ++W+A++ G+ EA + F ++ + + ++ L VCA
Sbjct: 259 CRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCAS 318
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
L++++MG ++H + ++ +++ N+LL MY K G + A + F +++ + D +S+ A
Sbjct: 319 LADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYGA 377
Query: 449 VLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+L+GY + G++EEA F +MQ +P T +L+ AC+++++L+ G+ H VI
Sbjct: 378 LLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRG 437
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
+ +L+++Y KC ++ + +VF + + D++ N+MI G+ + G+EA +F
Sbjct: 438 LALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFL 497
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK +G +PD +TF ++ AC H G V +FD+M KYGI+P++EHY CM+ L R
Sbjct: 498 SMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 557
Query: 628 GYMKELEDFVNRMPFNPTV 646
G++ E F+ MP V
Sbjct: 558 GFLDEAYQFIQSMPLKADV 576
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 38/466 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + + + + C++ + R + ++ +F+ I+ Y +C A
Sbjct: 96 PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAAN 155
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEEL 157
+F +MP RD +WNAML Y +G + LDM + G+ N T ++L A+
Sbjct: 156 VFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHG 215
Query: 158 ELGVSKQLHGLIVKRGFCGN---VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L +H ++ N V++ ++L+D Y KC + A R+F + +N V+W+
Sbjct: 216 ALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSA 275
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT-FANALFACSFLSSPYEGMQIHGVIIKI 273
++ +++ EA +F ML E + L+ T A+AL C+ L+ G Q+H ++ K
Sbjct: 276 LIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS 335
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D SL MY K G + +A L D+ ++ IS+ +++SGY +G+ EA +F
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+M NV D T+ ++ C+ L+ ++
Sbjct: 396 KKMQACNV-------------------------------QPDIATMVSLIPACSHLAALQ 424
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G+ HG + + + N+L+DMY KCG + +R F +M RD VSWN ++ GY
Sbjct: 425 HGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA-RDIVSWNTMIAGY 483
Query: 454 ARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ 498
G +EA T F M+ + P TF L+AAC++ + +GK
Sbjct: 484 GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKH 529
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 8/340 (2%)
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
W + + G++ AR++F+ +P + ++NA++ Y+ + A+D M
Sbjct: 36 WQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRV 95
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
++ T +L C+ L+++ G+ +H +++FVS AL+D+Y +C A
Sbjct: 96 PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAAN 155
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANI 490
F +M RD V+WNA+L GYA G A+ +MQ RP+ T +LL A
Sbjct: 156 VFAKMPM-RDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQH 214
Query: 491 SSLEQGKQIHCFVIRNCYEIN---VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
+L QG +H + +R + N V+ AL+++Y KC L YA RVF + + + +
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274
Query: 548 SMILGFCHNERGREALEVFGLMKKEGI-KPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
++I GF +R EA +F M EG+ + L C ++++ Q ++
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ-LHALLA 333
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
K GI L ++ +Y + G + E + + T+
Sbjct: 334 KSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTI 373
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 187/662 (28%), Positives = 309/662 (46%), Gaps = 48/662 (7%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A S + AR+L ++ P N + + G +D+AR LFD MP R+ SWN
Sbjct: 29 ARSGQLAAARRLFDSM----PRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWN 84
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
AM+ A + +G LF M + + + R+ EL V ++ G K
Sbjct: 85 AMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPG--DKC 142
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
C N +++ Y K DA ++ ++ + SWN + +G AV F
Sbjct: 143 TACYN-----AMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFF 197
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV-LGSLTEMYVK 291
+M+ +D+ N + A ++ G I E +VV +L Y +
Sbjct: 198 DEMVEKDMVSWNLMLEGFVRAGDLDAAA----SFFGRI-----ESPNVVSWVTLLNGYCR 248
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
GR+ DAR L D+ ERN+++ ++ GY R+ EA +LF+EMP +N ISW +++G
Sbjct: 249 AGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGL 308
Query: 352 TRSLLWKEALDFV-----------------FLMRKTTKDIDQVTLGLILN--VC-----A 387
R+ +EA D + +L R D Q+ G+ ++ VC +
Sbjct: 309 ARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMIS 368
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
G + M +E R + + N ++ Y + G +R A F +MS R++ VSWN
Sbjct: 369 GYVQRGMLEEAMLLFQRMP-NKDTVSWNTMIAGYAQGGQMRKAIGIFRRMS-RKNTVSWN 426
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
+V++G+ + G +A F M+ T R T+ + L ACAN+++L G+Q+H ++R+
Sbjct: 427 SVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRS 486
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ ++ R AL+ Y KC + A ++F E D++ N+++ G+ N +G EA+ VF
Sbjct: 487 GHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVF 546
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M+ G++PD +TF GIL AC G + L FF+SM +Y + P EHY CM L R
Sbjct: 547 REMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGR 606
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G + E + V M P + + C+ L AA +L+EL P + +
Sbjct: 607 AGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLL 666
Query: 687 TN 688
+N
Sbjct: 667 SN 668
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 42 YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
+S YA + CA+ A+ R+L S LV +F N I Y KCG + +A+ +FD
Sbjct: 457 WSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFD 516
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
EM +D SWNA++ Y NG + +F +M +GV +++T+ +L
Sbjct: 517 EMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGIL 565
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 192/681 (28%), Positives = 306/681 (44%), Gaps = 87/681 (12%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A S + AR+L + P N + + G +D+AR LFD MP R+ SWN
Sbjct: 29 ARSGQLAAARRLFDAM----PLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWN 84
Query: 113 AMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
AM+ A + +G LF M + + + R EL V ++ G K
Sbjct: 85 AMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMPG--DKC 142
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
C N +++ Y K DA ++ ++ + VSWN + +G AV F
Sbjct: 143 TACYN-----AMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFF 197
Query: 233 FKMLREDIRPLNFTFANALFACSF--LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
+M++ D+ N A + SS + ++ VI + +L Y
Sbjct: 198 DEMVK-DMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWV----------TLLNGYC 246
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
+ GR+ DAR L D+ ERN+++W ++ GY I EA +LF+EMP +N ISW +++G
Sbjct: 247 RAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISG 306
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN--DYS 408
R+ +EA D +D+++ N A + + +HG++ RN D +
Sbjct: 307 LARAGKLQEAKDL----------LDKMSF----NCVAAKTAL-----MHGYLQRNMADDA 347
Query: 409 SNIFVS---------NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
IF N ++ Y +CG L A + F +M + D VSWN ++ GYA+ GQ
Sbjct: 348 RRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNK-DMVSWNTMIAGYAQDGQM 406
Query: 460 EEAMTSFSEMQ------WETRPSKF--------------------------TFETLLAAC 487
+A+ F M W + S F T+ + L AC
Sbjct: 407 HKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRAC 466
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
AN++ L G+Q+H ++R+ + + AL+ Y KC + A ++F E D++ N
Sbjct: 467 ANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWN 526
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
++I G+ N +G EA+ VF M+ G++PD +TF GIL AC H G + L FF SM +
Sbjct: 527 ALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKE 586
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
Y + P EHY CM+ L R G + E + V M P + + C + L +
Sbjct: 587 YLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQL 646
Query: 668 AARRLNELNPWAPFQFKITTN 688
AA RL+EL P + + +N
Sbjct: 647 AAERLSELEPRKASNYVLLSN 667
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
+S YA + CA+ + R+L + LV F N I Y KCG + +A+ +
Sbjct: 454 ADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQI 513
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
FDEM +D SWNA++ Y NG + +F +M +GV +++T+ +L +
Sbjct: 514 FDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSA 566
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 250/506 (49%), Gaps = 35/506 (6%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y K AR + +N VSW ++ G+ A+V FF+M RE + P +FTF
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDE 307
A A + L P G QIH + +K D V S +MY K RL D
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKT-RLRD---------- 110
Query: 308 RNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
+AR+LF+E+PERN+ +WNA ++ +EA++
Sbjct: 111 --------------------DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 150
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
R+ + +T LN C+ + +G ++HG + R+ + +++ V N L+D Y KC +
Sbjct: 151 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 210
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAA 486
RS+ I F +M + + VSW +++ Y + + E+A + + + S F ++L+A
Sbjct: 211 RSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 269
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA ++ LE G+ IH ++ C E + ALV++Y KC C+E + + F E +++
Sbjct: 270 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 329
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGI--KPDHITFHGILLACIHEGNVKLALQFFDSM 604
NS+I G+ H + AL +F M G P+++TF +L AC G V+ ++ FDSM
Sbjct: 330 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 389
Query: 605 RCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATL 664
R YGI P EHY C++ + R G ++ +F+ +MP PT+ + + + CR +G L
Sbjct: 390 RSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQL 449
Query: 665 GEWAARRLNELNPWAPFQFKITTNRF 690
G AA L +L+P + +N F
Sbjct: 450 GLLAAENLFKLDPKDSGNHVLLSNTF 475
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 200/417 (47%), Gaps = 37/417 (8%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y K + + AR + P R+ SW +++ QNG L F +M GV N T+
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 147 ANVLRSSAEELELGVS-KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
++ A L L V+ KQ+H L VK G +V + S D Y K + DAR++FD+I
Sbjct: 62 PCAFKAVAS-LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
+N +WN + + G +EA+ F + R D P + TF L ACS GMQ
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+HG++++ F+ D V L + Y KC ++ + + + +N +SW S+V+ Y +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A L Y RS RK + + +L+
Sbjct: 241 DEKASVL------------------YLRS-------------RKDIVETSDFMISSVLSA 269
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
CAG++ +++G+ +H + IFV +AL+DMY KCG + + F +M + ++ V+
Sbjct: 270 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE-KNLVT 328
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE---TRPSKFTFETLLAACANISSLEQGKQI 499
N+++ GYA +GQ + A+ F EM P+ TF +LL+AC+ ++E G +I
Sbjct: 329 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 12/431 (2%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ AS + V +++ + V VF+ A + Y K DDAR LFDE+PER+
Sbjct: 65 FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNL 124
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+WNA + +G P +E F++ N IT+ L + ++ L L + QLHGL
Sbjct: 125 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 184
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+++ GF +V + + L+D YGKC + + +F ++ KNAVSW +V Y+ ++A
Sbjct: 185 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 244
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
V++ + ++ + +F ++ L AC+ ++ G IH +K E V +L +M
Sbjct: 245 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 304
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNVI 342
Y KCG +ED+ D+ E+N+++ S++ GYA G++ A LF EM P N +
Sbjct: 305 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 364
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTK-DIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++ ++L+ +R+ + + MR T + I+++ L M + + F
Sbjct: 365 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM---LGRAGMVERAYEF 421
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQS 459
I + I V AL + R G + + + + K S N VL +A G+
Sbjct: 422 IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRW 481
Query: 460 EEAMTSFSEMQ 470
EA T E++
Sbjct: 482 AEANTVREELK 492
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 36/356 (10%)
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY K E AR +L RN++SWTS++SG A +G A F EM V+
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP---- 56
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ T A L GK++H +
Sbjct: 57 ---------------------------NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 89
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++FV + DMY K AR F ++ +R + +WNA ++ G+ EA+ +F
Sbjct: 90 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE-TWNAFISNSVTDGRPREAIEAFI 148
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINV-VCRGALVEVYTKC 525
E + + P+ TF L AC++ L G Q+H V+R+ ++ +V VC G L++ Y KC
Sbjct: 149 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG-LIDFYGKC 207
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
+ + +F E + + + S++ + N +A ++ +K+ ++ +L
Sbjct: 208 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 267
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
AC ++L + + K + + ++ +Y + G +++ E + MP
Sbjct: 268 SACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 322
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ + + CA + R + ++ V +F+ + ++ YGKCG ++D+ FDEM
Sbjct: 262 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 321
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV--SANQITYANVLRS 152
PE++ + N+++G Y G L LF +M G + N +T+ ++L +
Sbjct: 322 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 372
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/551 (29%), Positives = 270/551 (49%), Gaps = 45/551 (8%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF-DDIQNKN 208
L+S A+ L KQLH L++ GF + +SL++ Y KC M +A +F D +N
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
++N I+ ++ G + + KM E + P +TF + C E +IHG
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCC---EVMEVKKIHG 134
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
++K+ E D V +L Y+K G +E +
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSME-------------------------------D 163
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
A+++F E+ R+V+ WNAM+ GY + EAL+ M + T+ IL+V A
Sbjct: 164 AQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFAS 223
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
++ GK VHG + + Y S + VSNAL+DMY KC ++ A I F +M +D SWN+
Sbjct: 224 RGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIF-EMINEKDIFSWNS 282
Query: 449 VLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI--- 504
+++ + + G + + F +M P T T+L AC+++++L G++IH ++I
Sbjct: 283 IISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIING 342
Query: 505 -----RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
N N++ A++++Y KC + A+++F S DV N MI+G+ +
Sbjct: 343 LGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYA 402
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYEC 619
EAL +F M + KP+ +T G+L AC H G V F M +G+IP +EHY C
Sbjct: 403 LEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTC 462
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
+I + R G++++ + V +MP + R + CR +G A L E AAR++ +L P
Sbjct: 463 VIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEH 522
Query: 680 PFQFKITTNRF 690
+ + +N +
Sbjct: 523 CGSYVLMSNVY 533
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 49/462 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLF-DEMP 104
Q CA + + + ++L S ++T F P+PP + I Y KCG + +A +F D
Sbjct: 17 FLQSCADHQNLNKGKQLHSLMITYGFSPSPPS--ITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ ++NA++ + NG + + + M GV ++ T+ V+R+ E +E+ K+
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KK 131
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+HG ++K G +V + S+LV+ Y K M DA+++F ++ ++ V WN ++ Y G
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
EA+ +F +M + + P FT L + G +HG+++K+ ++ V +
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA 251
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +MY KC + DA + + +E++I SW SI+S + G LF++M ++
Sbjct: 252 LIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILP- 310
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI-- 402
D VT+ +L C+ L+ + G+E+HG++
Sbjct: 311 ------------------------------DLVTITTVLPACSHLAALMHGREIHGYMII 340
Query: 403 ------HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
N N+ VSNA++DMY KCG++ +A F MS ++D SWN ++ GY
Sbjct: 341 NGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMS-KKDVASWNIMIMGYGMH 399
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGK 497
G + EA+ FS+M + E +P++ T +L+AC + + G+
Sbjct: 400 GYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGR 441
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 196/420 (46%), Gaps = 16/420 (3%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
++E +K+ L+ VF+ + + Y K G+++DA+ +F E+ RD WNAM+
Sbjct: 126 VMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMING 185
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGN 177
Y + G LE+F M+ GV+ ++ T +L A +L K +HG+++K G+
Sbjct: 186 YAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSG 245
Query: 178 VILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
V + ++L+D YGKC + DA +F+ I K+ SWN I+ + G+ + +F KML
Sbjct: 246 VSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLG 305
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD--------VVLGSLTEMY 289
I P T L ACS L++ G +IHG +I DD +V ++ +MY
Sbjct: 306 SGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMY 365
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWN 345
KCG + +A + D ++++ SW ++ GY + G EA +F++M E N ++
Sbjct: 366 AKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLV 425
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+L+ + F+ M T I T+ V L ++ + + +
Sbjct: 426 GVLSACNHAGFVSHGRLFLAQMESTFGVIP--TIEHYTCVIDMLGRAGHLEDAYEIVQKM 483
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQSEEAM 463
+N V ALL R GN A I Q+ Q + + VL Y G+ EE +
Sbjct: 484 PIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVL 543
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 191/684 (27%), Positives = 324/684 (47%), Gaps = 49/684 (7%)
Query: 19 KPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVF 78
K + LT T S H +++ ++ SL L + C +K + L L T
Sbjct: 34 KAITTLNLTDTESTH--NNKLITSSL---LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTL 88
Query: 79 LLNRAIECYGKCGNLDDARGLFDEM--PERDGGSWNAMLGAYTQNGFPGRTLELFLDMN- 135
LLN I Y K + A +F M +RD S+++++ + N + +E+F +
Sbjct: 89 LLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVM 194
GV N+ + V+R+ + L G ++K G F +V + L+D + K +
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSL 208
Query: 195 TD---ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANA 250
D AR++FD ++ KN V+W +++ R G EA+ +F +ML P FT
Sbjct: 209 ADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGL 268
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
+ C+ + G ++H +I+ D V SL +MY KCG
Sbjct: 269 ISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGL---------------- 312
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL--LWKEALD-FVFLM 367
++EAR++F+ M E NV+SW A++ GY R +EA+ F ++
Sbjct: 313 ---------------VQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ + T +L CA L + G++VHG + S+ V N L+ +Y K G +
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRM 417
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAA 486
SAR F + ++ + VS V + E+++ + S FT+ +LL+
Sbjct: 418 ESARKCFDVLFEK-NLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSG 476
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
A I ++ +G+QIH V++ + ++ AL+ +Y+KC E A++VF + +VI
Sbjct: 477 AACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITW 536
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
S+I GF + +ALE+F M + G+KP+ +T+ +L AC H G + A + F SMR
Sbjct: 537 TSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRD 596
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+GI+P++EHY CM+ L R G + E +F+N MPF+ + R CR + LGE
Sbjct: 597 NHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGE 656
Query: 667 WAARRLNELNPWAPFQFKITTNRF 690
AA+ + E P P + + +N +
Sbjct: 657 HAAKMILEREPHDPATYILLSNLY 680
>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
Length = 730
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 186/706 (26%), Positives = 310/706 (43%), Gaps = 112/706 (15%)
Query: 62 RKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN 121
R++ S L L N ++ YGKCGNL +AR FD + E++ SW+ ++G Y+++
Sbjct: 1 RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVI 179
+ELF M+ V N +T+ N L SSAE LE G K++H IV +
Sbjct: 61 RLSREAIELFHAMD---VRPNCVTFINTLGACSSAEFLETG--KKIHAQIVAGEVELELN 115
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
L +SL+ Y C + DA+R FD + +N VSWN I+ + G+ +EAV +F++M ++
Sbjct: 116 LANSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQG 175
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVI----IKIDFEGDDVVL------GSLTEM- 288
+P +F + ACS L +G +IH +K+D + +L GSL +
Sbjct: 176 FKPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDAR 235
Query: 289 --------------------YVKCGRLEDARGLLDQ----PDERNIIS------------ 312
Y + R DA + + P+E I+
Sbjct: 236 LVFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKMGVAPNEVTFITILGACAEARALK 295
Query: 313 ----------------------WTSIVSGYAISGRIREARELFNEMP--ERNVISWNAML 348
+++ YA G + +A+ +F M ERNV++W +++
Sbjct: 296 QAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSII 355
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
A +EAL M +++T G +L+ CA L + + +HG I Y
Sbjct: 356 AACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYD 415
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQR---------------------------- 440
+ V N L++M+ KCG L AR F +M R
Sbjct: 416 RDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQM 475
Query: 441 -----RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+D ++W ++ YA+ G ++EA+ ++ M E P + TF LL AC+ + + +
Sbjct: 476 ERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKK 535
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
+G I ++ + V LV Y C A VF+ + D N+ I
Sbjct: 536 EGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSG 595
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ E+L +F M EG++PD ITF +L +C H G ++ A ++F MR +G+ P +
Sbjct: 596 QHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSGEIERAWRWFLVMRGDHGMEPNV 655
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
EH+ C+ L+ R G++ E E V+ +P + C+ +G
Sbjct: 656 EHWGCLADLFGRLGWIDEAERLVSFLPRTRASIAWTTLLSGCKVHG 701
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 251/500 (50%), Gaps = 15/500 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ +F C+ + + + R++ + V + N + Y +CG+LDDAR +FD +
Sbjct: 183 FVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSIT 242
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ SW +M+ AY Q E+F M GV+ N++T+ +L + AE L +++
Sbjct: 243 SRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEARALKQARE 299
Query: 165 LHGLIVKRGFC--GNVILESSLVDAYGKCMVMTDARRMFDDIQN--KNAVSWNVIVRRYL 220
+H L++ G + + + L++ Y KC ++DA+ +F+ + +N V+W I+
Sbjct: 300 IHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAACG 359
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+ G+ +EA+ +F +M E I TF L AC+ L S E +HG+I+ ++ D V
Sbjct: 360 LCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYDRDTV 419
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE-- 338
V L M+ KCG LEDAR + ++ RN+++WT ++ Y IR+A LF +M
Sbjct: 420 VCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQMERIS 479
Query: 339 -RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++V++W M+A Y ++ EAL M D++T +L+ C+ + K G
Sbjct: 480 YKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKKEGWT 539
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+ I S+ + N L+ Y CG A++ F +++ RD +WNA + + G
Sbjct: 540 IRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVFENLAE-RDSAAWNAAIGVSGQHG 598
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY--EINVVC 514
+E++ F M E P + TF +L +C++ +E+ + V+R + E NV
Sbjct: 599 FYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSGEIERAWRWF-LVMRGDHGMEPNVEH 657
Query: 515 RGALVEVYTKCCCLEYAIRV 534
G L +++ + ++ A R+
Sbjct: 658 WGCLADLFGRLGWIDEAERL 677
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 150/328 (45%), Gaps = 44/328 (13%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P + + + CA + EAR L +V+ + N I +GKCG L+DAR
Sbjct: 380 PANEITFGTVLSACADLGSTREARYLHGLIVSGGYDRDTVVCNGLINMFGKCGMLEDARA 439
Query: 99 LFDEMPERDGGSWNAMLGAYTQN----------------------------------GFP 124
+F+ M R+ +W MLGAY Q G+
Sbjct: 440 IFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQAGYA 499
Query: 125 GRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ---LHGLIVKRGFCGNVILE 181
L+L+ M GV+ ++IT+ N+L + + +G K+ + I++RG + +L
Sbjct: 500 DEALKLYARMGLEGVAPDEITFVNLLHACS---RMGAKKEGWTIRSHILERGLPSSRVLG 556
Query: 182 SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIR 241
+ LV YG C A+ +F+++ +++ +WN + G E++ +F +M+ E +
Sbjct: 557 NGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMVLEGME 616
Query: 242 PLNFTFANALFACSFLSSPYEGMQIHGVIIKID--FEGDDVVLGSLTEMYVKCGRLEDAR 299
P TF N LF+CS S E ++++ D E + G L +++ + G +++A
Sbjct: 617 PDEITFTNVLFSCSH-SGEIERAWRWFLVMRGDHGMEPNVEHWGCLADLFGRLGWIDEAE 675
Query: 300 GLLD-QPDERNIISWTSIVSGYAISGRI 326
L+ P R I+WT+++SG + G +
Sbjct: 676 RLVSFLPRTRASIAWTTLLSGCKVHGDV 703
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/550 (29%), Positives = 264/550 (48%), Gaps = 39/550 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
++ L+ SA+ L KQLH ++K G C + L++ ++ Y KC D +MFD++
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVV-----MFFKMLREDIRPLNFTFANALFACSFLSSPY 261
KN VSWN ++ +V GN K A+V F +M+ E + P T L A L+
Sbjct: 137 KNVVSWNTLICG-VVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVG 195
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
Q+H I+K F+ N +++V YA
Sbjct: 196 ICRQLHCFILKSGFD-------------------------------SNCFVGSALVDSYA 224
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
G + EA+ F+E+ R+++ WN M++ Y + + +A LMR D T
Sbjct: 225 KFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTS 284
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
++N C L +GK+VHG I R + ++ V++AL+DMY K N+ AR F M +
Sbjct: 285 MINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVK- 343
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
+ VSW ++ GY + G +EAM EM + T P + ++L++C N+S+ + Q+H
Sbjct: 344 NIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVH 403
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+V+ N +E + ALV Y+KC + A + F + D+I S++ + + +
Sbjct: 404 AYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSK 463
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
E +EVF M ++PD + F G+L AC H G V L +F+ M Y I+P EHY C+
Sbjct: 464 EGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCI 523
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
I L R G++ E + + MP P L C+ + L WA+ +L + P P
Sbjct: 524 IDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEP 583
Query: 681 FQFKITTNRF 690
+ + +N +
Sbjct: 584 ANYSLMSNMY 593
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 263/539 (48%), Gaps = 68/539 (12%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTIS-----------------GHLKSDEP--------- 39
+T + N S SS PTPS TLT G L++ P
Sbjct: 9 STFIANFKSHSSASPTPSPTLTGATKNAPSHDPHRQSHSFPYLGGLRASLPETGFTNLVD 68
Query: 40 --VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
++S +H ++ A + ++L ++++ + L N+ + Y KC +D
Sbjct: 69 SCSTHSFSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVC 128
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL----FLDMNHSGVSANQITYANVLRSS 153
+FDEMP ++ SWN ++ + + L F M ++ N IT +LR+S
Sbjct: 129 KMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRAS 188
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E ++G+ +QLH I+K GF N + S+LVD+Y K ++ +A+ FD++ +++ V WN
Sbjct: 189 IELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWN 248
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
V+V Y + G +A +F M E ++ NFTF + + +C L S G Q+HG+II++
Sbjct: 249 VMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRL 308
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
F+ D +V +L +MY K +EDAR D +NI+SWT+++ GY G +EA L
Sbjct: 309 SFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLL 368
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
E M+ YT D++ L IL+ C LS
Sbjct: 369 QE-----------MIRVYTYP--------------------DELALASILSSCGNLSATS 397
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+VH ++ N + + + ++NAL+ Y KCG++ SA F +++ D +SW +++ Y
Sbjct: 398 EVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAE-PDIISWTSLMGAY 456
Query: 454 ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEI 510
A G S+E + F +M + RP K F +L+ACA+ + +G +H F ++ N Y+I
Sbjct: 457 AFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEG--LHYFNLMINVYQI 513
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 144/349 (41%), Gaps = 16/349 (4%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
V + + ++ Y K N++DAR FD M ++ SW M+ Y Q+G + L +M
Sbjct: 314 VLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIR 373
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+++ A++L S Q+H +V+ GF + + ++LV AY KC +
Sbjct: 374 VYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGS 433
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A + F + + +SW ++ Y G KE V +F KML ++RP F L AC+
Sbjct: 434 AFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAH 493
Query: 257 LSSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLD----QPDERNII 311
EG+ ++I + D + ++ + G L++A LL +P +
Sbjct: 494 GGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLG 553
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
++ + G R A E M +++ M Y W + LMR+
Sbjct: 554 AFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERC 613
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDM 420
D G S +++ EVH F+ R+ +LD+
Sbjct: 614 -DFK----------VPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGMLDL 651
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 267/549 (48%), Gaps = 37/549 (6%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L S L +++Q H I+ G N +L + L+ AY C +R +FD +Q+KN
Sbjct: 30 LHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNV 89
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
WN ++ Y EA +F +M D+ P +FT + S L + + G IHG
Sbjct: 90 FLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I+I F D VV S+ MY KCG E++R + D+ RN SW +++GYA+SG
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCN-- 207
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG- 388
F E E +FV M+ D T+ +L +C G
Sbjct: 208 ---FRE-----------------------ETWEFVKQMQMDEVRPDAYTISSLLPLCDGD 241
Query: 389 LSEIKMGKEVHGFIHRND----YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+ G+E+H +I +N+ S++ + L+DMY + + R F +M + R+
Sbjct: 242 KGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRM-KCRNVF 300
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSLEQGKQIHCF 502
SW A++ GY G S+EA++ F +MQ P++ + ++L AC++ S L G+QIH F
Sbjct: 301 SWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGF 360
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHNERGRE 561
+R V AL+++Y+KC L+ A RVF++ S D I +SMI G+ + +G+E
Sbjct: 361 AVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQE 420
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
A+ ++ M + GI+PD IT GIL AC G V L + S+ YGI P LE + C++
Sbjct: 421 AILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIV 480
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
+ R G + DF+ MP P + + +G + E A R L +L P P
Sbjct: 481 DMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPS 540
Query: 682 QFKITTNRF 690
+ +N +
Sbjct: 541 NYVSISNLY 549
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 235/467 (50%), Gaps = 39/467 (8%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ K++ R+ S +++ + L + I Y C + +R +FD + ++
Sbjct: 30 LHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNV 89
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
WN+++ Y +N +LF M S V + T + + + S+E L K +HG
Sbjct: 90 FLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG--K 226
++ GF + ++ +S++ Y KC ++R++FD++ +N+ SWNV++ Y V+GN +
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 227 EAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFE---GDDVV 281
E F K ++ D +RP +T ++ L C ++ G ++H I+K + DV
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVH 269
Query: 282 LG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
LG L +MY + ++ R + D+ RN+ SWT++++GY +G EA LF +M
Sbjct: 270 LGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDM---- 325
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ +D + + ++V+L +L C+ S + G+++HG
Sbjct: 326 ------------------QVIDGI--------EPNRVSLVSVLPACSSFSGLLSGRQIHG 359
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
F R + ++ + + NAL+DMY KCG+L SAR F S +D +SW+++++GY G+ +
Sbjct: 360 FAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQ 419
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
EA+ + +M Q RP T +L+AC+ + +G I+ VI +
Sbjct: 420 EAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVIND 466
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 13/298 (4%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSAN 142
I+ Y + + R +FD M R+ SW AM+ Y +NG L LF DM G+ N
Sbjct: 275 IDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPN 334
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF- 201
+++ +VL + + L +Q+HG V++ V L ++L+D Y KC + ARR+F
Sbjct: 335 RVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFE 394
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
DD K+A+SW+ ++ Y + G G+EA++++ KML+ IRP T L ACS
Sbjct: 395 DDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVN 454
Query: 262 EGMQIHGVIIK-IDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG 319
EG+ I+ +I E + + +M + G+L+ A + P E W ++VS
Sbjct: 455 EGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSC 514
Query: 320 YAISGRIREAREL----FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
I G + E +EL ++ N ++ ++ Y S W D V +R+ KD
Sbjct: 515 SIIHGDL-EMQELAYRFLIQLEPENPSNYVSISNLYASSRRW----DAVAEVRRMMKD 567
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP SL + + C+S ++ R++ V V L N I+ Y KCG+LD AR
Sbjct: 332 EPNRVSLVS-VLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSAR 390
Query: 98 GLF-DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F D+ +D SW++M+ Y +G + L+ M +G+ + IT +L + +
Sbjct: 391 RVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRS 450
Query: 157 LELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS-WNV 214
+ ++ ++ G + + + +VD G+ + A + + S W
Sbjct: 451 GLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGA 510
Query: 215 IVRRYLVAGNGK-EAVVMFFKMLREDIRPLNFTFANALFACS 255
+V ++ G+ + + + F + E P N+ + L+A S
Sbjct: 511 LVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASS 552
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 264/537 (49%), Gaps = 80/537 (14%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYG-----KCMVMTDARRMFDDIQNKNAVSWNVIVR 217
KQ H LI++ G + + SLV +Y + + + R+FD ++ N WN +++
Sbjct: 51 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ +A++++++M+ RP +T+ L ACS EG+Q+H ++K G
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D +L S MY GRL +AR R L ++
Sbjct: 171 DGHILSSAIRMYASFGRLVEAR------------------------------RILDDKGG 200
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
E + + WNAM+ GY R E++ +E
Sbjct: 201 EVDAVCWNAMIDGYLR-----------------------------------FGEVEAARE 225
Query: 398 V-HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
+ G R S I NA++ + +CG + AR +F +M +R D++SW+A++ GY +
Sbjct: 226 LFEGMPDR----SMISTWNAMISGFSRCGMVEVAREFFDEMKER-DEISWSAMIDGYIQE 280
Query: 457 GQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G EA+ F +MQ E RP KF ++L+ACAN+ +L+QG+ IH + RN +++ V
Sbjct: 281 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 340
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+LV++Y KC ++ A VF++ S+ +V N+MI G + R +A+++F M I
Sbjct: 341 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IN 397
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ ITF G+L AC H G V+ L F+SMR +YG+ PQ+EHY C++ L R G + E E
Sbjct: 398 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 457
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
V+ +P PT + + CRK+G LGE + L EL P ++ + +N + +
Sbjct: 458 VVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAK 514
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 174/390 (44%), Gaps = 73/390 (18%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN M+ +N P + + L+ +M + N+ TY VL++ ++ + Q+H +V
Sbjct: 105 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGNGKEAV 229
K G G+ + SS + Y + +ARR+ DD + +AV WN ++ YL G + A
Sbjct: 165 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 224
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F EGM +I ++ +
Sbjct: 225 ELF-----------------------------EGMPDRSMI---------STWNAMISGF 246
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
+CG +E AR D+ ER+ ISW++++ GY G EA E+F++M + +
Sbjct: 247 SRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKI-------- 298
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
FV L +L+ CA L + G+ +H + RN
Sbjct: 299 ---------RPRKFV--------------LPSVLSACANLGALDQGRWIHTYAKRNSIQL 335
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ + +L+DMY KCG + A F +MS ++ SWNA++ G A G++E+A+ FS+M
Sbjct: 336 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSN-KEVSSWNAMIGGLAMHGRAEDAIDLFSKM 394
Query: 470 QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ P++ TF +L ACA+ +++G I
Sbjct: 395 --DINPNEITFVGVLNACAHGGLVQKGLTI 422
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 172/392 (43%), Gaps = 45/392 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y + + C+ + + E ++ ++LV +L+ AI Y G L +AR
Sbjct: 135 PNKYT-YPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARR 193
Query: 99 LFDEMP-ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+ D+ E D WNAM+ Y + G ELF M + I+ N
Sbjct: 194 ILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMP----DRSMISTWN--------- 240
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+++ + +C ++ AR FD+++ ++ +SW+ ++
Sbjct: 241 -------------------------AMISGFSRCGMVEVAREFFDEMKERDEISWSAMID 275
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ G EA+ +F +M +E IRP F + L AC+ L + +G IH + +
Sbjct: 276 GYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL 335
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V+ SL +MY KCGR++ A + ++ + + SW +++ G A+ GR +A +LF++M
Sbjct: 336 DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD 395
Query: 338 -ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT-LGLILNVCAGLSEIKMG 395
N I++ +L L ++ L MRK Q+ G I+++ L +
Sbjct: 396 INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL---LGRAGLL 452
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
E + V ALL RK GN+
Sbjct: 453 TEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 484
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 32/334 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I + +CG ++ AR FDEM ERD SW+AM+ Y Q G LE+F M +
Sbjct: 240 NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIR 299
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ +VL + A L + +H + + +L +SLVD Y KC + A +
Sbjct: 300 PRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEV 359
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+ + NK SWN ++ + G ++A+ +F KM DI P TF L AC+
Sbjct: 360 FEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLV 416
Query: 261 YEGMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS 312
+G+ I +GV +I+ G + ++ + G L +A ++ P E
Sbjct: 417 QKGLTIFNSMRKEYGVEPQIEH------YGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAV 470
Query: 313 WTSIVSGYAISGRI---REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
W +++ G + ++ E+ +N + + Y ++ W+E + LM++
Sbjct: 471 WGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKE 530
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGK-EVHGFI 402
+ G S I +G+ EVH FI
Sbjct: 531 RG-----------IKTTPGTSIIDLGRGEVHKFI 553
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 14/213 (6%)
Query: 473 TRPSKFTFETLLAACAN--ISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC--- 527
T SK + + +L +SL KQ H ++R + + G+LV+ Y
Sbjct: 25 TETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRY 84
Query: 528 --LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
E ++RVF +V + N MI N +A+ ++ M +P+ T+ +L
Sbjct: 85 LSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVL 144
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC G V +Q + K+G+ I++Y +G + E ++
Sbjct: 145 KACSDAGVVAEGVQVHAHL-VKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD 203
Query: 646 VPMLRKIFDKCRKNGYATLGEW-AARRLNELNP 677
+ D GY GE AAR L E P
Sbjct: 204 AVCWNAMID-----GYLRFGEVEAARELFEGMP 231
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 270/549 (49%), Gaps = 65/549 (11%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD--AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
K++H ++ G + S LV A + + ++ ++ N N SWN+ +R Y+
Sbjct: 71 KEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYV 130
Query: 221 VAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ N AV+++ MLR+ P N+T+ C+ S + +I G +I++ F+ D
Sbjct: 131 ESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDL 190
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V ++ + V CG L AR+LF+E R
Sbjct: 191 FVHNAIIHVLVSCGEL-------------------------------LAARKLFDESCVR 219
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+++SWN+++ GY R L EA D + M + D+VT+ +++ A L + +G+++H
Sbjct: 220 DLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLH 279
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------- 440
I + + ++NAL+DMY KC N+ +A+I F M+++
Sbjct: 280 QSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLE 339
Query: 441 -----------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACA 488
+D V WNA++ G+ + +S+EA+ F EMQ + P K T L+AC+
Sbjct: 340 SAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACS 399
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ +L+ G +H +V ++ +NV ALV++Y KC ++ AI+VF+E + + +
Sbjct: 400 QLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTA 459
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+I G + + A+ F M G+ PD ITF G+L AC H G V +F M KY
Sbjct: 460 IICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKY 519
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
GI P+L+HY C++ L R G+++E E+ + MPF P + +F R +G +GE A
Sbjct: 520 GISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERA 579
Query: 669 ARRLNELNP 677
A +L EL+P
Sbjct: 580 ASKLLELDP 588
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 250/482 (51%), Gaps = 13/482 (2%)
Query: 27 TKTISGHLKSDEPVSYSLYAHLFQ------LCASSKAIVEARKLESNLVTFYPTPPVFLL 80
T+++ H D+P +++ L Q L + ++ + +++ + +++ F L
Sbjct: 32 TRSLPHH--KDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFAL 89
Query: 81 NRAIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+R + + NLD + + + SWN + Y ++ P + L+ +M G
Sbjct: 90 SRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKG 149
Query: 139 VS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + TY + + A + ++ G +++ GF ++ + ++++ C + A
Sbjct: 150 SAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAA 209
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD+ ++ VSWN I+ Y+ G EA +++KM ++ P T + A + L
Sbjct: 210 RKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQL 269
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G ++H I ++ + +L +MY+KC +E A+ L + ++ ++SWT++V
Sbjct: 270 ENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMV 329
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
GYA G + A LFNEMPE++V+ WNA++ G+ ++ KEAL M+ ++ D++
Sbjct: 330 IGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKI 389
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ L+ C+ L + +G +H ++ +++ + N+ + AL+DMY KCGN++ A F +M
Sbjct: 390 TVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEM 449
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
R+ ++W A++ G A GQ A++ FSEM P + TF +L+AC + ++QG
Sbjct: 450 PG-RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQG 508
Query: 497 KQ 498
+
Sbjct: 509 RD 510
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 214/521 (41%), Gaps = 82/521 (15%)
Query: 29 TISGHLKSDEPVSYSL-----------------YAHLFQLCASSKAIVEARKLESNLVTF 71
I G+++S+ P++ L Y LF++CA A ++ +++
Sbjct: 125 AIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQL 184
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
+F+ N I CG L AR LFDE RD SWN+++ Y + G +L+
Sbjct: 185 GFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLY 244
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M V +++T V+ +SA+ L + ++LH I + G V L ++L+D Y KC
Sbjct: 245 YKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKC 304
Query: 192 M-------------------------------VMTDARRMFDDIQNKNAVSWNVIVRRYL 220
++ A R+F+++ K+ V WN ++ ++
Sbjct: 305 KNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFV 364
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
A KEA+ +F +M + P T N L ACS L + G+ +H + K + +
Sbjct: 365 QAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVA 424
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +L +MY KCG ++ A + ++ RN ++WT+I+ G A+ G+ A F+EM
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIG 484
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE-VH 399
++ D++T +L+ C + G++ +
Sbjct: 485 LVP-------------------------------DEITFIGVLSACCHGGLVDQGRDYFY 513
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S + + L+D+ + G L A M D V W A+ G G
Sbjct: 514 QMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNV 573
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSL-EQGKQI 499
+ S++ E P LLA +++ EQ +++
Sbjct: 574 HMGERAASKLL-ELDPHDGGIYVLLANMYGDANMWEQARKV 613
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/610 (28%), Positives = 299/610 (49%), Gaps = 46/610 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELFLDMN 135
+F+ ++ YGKCG ++ A +F + D WNA + A N P R L L M
Sbjct: 166 LFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMW 225
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
G+ N+ ++ +L S + L +++ +H + + GF G+V++ ++LV YG+C +
Sbjct: 226 LEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVD 285
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL-FAC 254
++ +F+ + +N VSWN ++ + G+ A ++++M +E RP TF AL AC
Sbjct: 286 ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAAC 345
Query: 255 SFLSSPY-EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
S S E +HG I EGD V++G
Sbjct: 346 SSSSQDLGESAALHGWIACAGLEGD-VMVG------------------------------ 374
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
T++V+ Y +G I AR F+ +P +N++SWNAML Y + +EA++ M++ +
Sbjct: 375 TALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLA 434
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFVSNALLDMYRKCGNLRSARI 432
++V+ +L C +SE + +H + N ++ ++N ++ M+ + G+L A
Sbjct: 435 PNKVSYLAVLGCCEDVSE---ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMA 491
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANIS 491
F + +D VSWN + + R A+T+F MQ E RP KFT +++ CA++
Sbjct: 492 AF-DATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLG 550
Query: 492 SLEQGKQIHCFVIRNC-YEINVVCRGALVEVYTKC-CCLEYAIRVFKE--SSSLDVIICN 547
+LE G+ I + E +VV A++ + KC ++ R+F D++ N
Sbjct: 551 TLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWN 610
Query: 548 SMILGFCHNERGREALEVFGLM-KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
+MI + + GR+AL++F +M ++ ++PD TF +L C H G V+ + F R
Sbjct: 611 TMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLARE 670
Query: 607 KYGIIPQ-LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLG 665
GI Q +EHY C++ + R GY++E EDF+ +MP + + C G G
Sbjct: 671 VLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGG 730
Query: 666 EWAARRLNEL 675
E AAR EL
Sbjct: 731 ERAARAFIEL 740
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 218/468 (46%), Gaps = 44/468 (9%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + C ++ AR + + + V + + YG+CG++D++ +F+ M
Sbjct: 236 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 295
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--SAEELELGVS 162
R+ SWNAM+ A+ Q G ++ M G N+IT+ L++ S+ +LG S
Sbjct: 296 VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGES 355
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
LHG I G G+V++ ++LV YG + AR FD I KN VSWN ++ Y
Sbjct: 356 AALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN 415
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-FEGDDVV 281
G +EA+ +F M R+ + P ++ L C +S E IH ++ F + +
Sbjct: 416 GRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSI 472
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ M+ + G LE+A D ++ +SW + V+ + ARE +
Sbjct: 473 ANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALS-------AREDLH------- 518
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
A+ A YT M+ D+ TL +++VCA L +++G+ +
Sbjct: 519 ---GAITAFYT--------------MQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQ 561
Query: 402 IHRN-DYSSNIFVSNALLDMYRKCGNL--RSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ + ++ V +A+++M KCG+ R++ R+D V+WN ++ YA+ G
Sbjct: 562 LSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 621
Query: 459 SEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVI 504
+A+ F MQ + RP TF ++L+ C++ +E G IHCF +
Sbjct: 622 GRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFL 667
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 140/620 (22%), Positives = 258/620 (41%), Gaps = 53/620 (8%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+ + A L + C + + R+L +V L N ++ Y KC +LDDA
Sbjct: 19 DDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDA 78
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN---HSGVSANQITYANVLRSS 153
F + R +WN ++ A + P +L+ M + N++T VL +
Sbjct: 79 NAAFSALRSRGIATWNTLIAAQSS---PAAVFDLYTRMKLEERAENRPNRLTIIAVLGAI 135
Query: 154 AE------ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
A ++ +H I ++ + ++L+DAYGKC + A +F IQ
Sbjct: 136 ASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVP 195
Query: 208 NAVSWNVIVRRYLVAGNGK---EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + WN + AGN + A+++ +M E + P +F L +C SS
Sbjct: 196 DLICWNAAI--MACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLAR 253
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
IH + ++ F GD VV +L MY +CG ++++ + + RN +SW ++++ +A G
Sbjct: 254 SIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCG 313
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
A ++ W G+ + FV ++ Q
Sbjct: 314 HRSAAFAIY----------WRMQQEGFR-----PNKITFVTALKAACSSSSQ-------- 350
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
++ +HG+I ++ V AL+ MY G + AR F + ++ V
Sbjct: 351 ------DLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPA-KNIV 403
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWNA+LT Y G++ EAM F+ M+ ++ P+K ++ +L C ++S + + IH V
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVS---EARSIHAEV 460
Query: 504 IRN-CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+ N + +V ++ + LE A+ F + D + N+ + E A
Sbjct: 461 VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGA 520
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ F M+ EG +PD T ++ C G ++L + + + ++
Sbjct: 521 ITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMN 580
Query: 623 LYCRYG-YMKELEDFVNRMP 641
+ + G + E E RMP
Sbjct: 581 MVAKCGSSVDECERLFARMP 600
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 262/534 (49%), Gaps = 37/534 (6%)
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+A++LR + L +Q+H I+ G N L +SL++AY C ++ DA+++F
Sbjct: 27 HASILRKLKDLKPL---QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP 83
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
KN VSW +++ EA+ +F +M+ + +P T ++ L A + L
Sbjct: 84 YKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKS 143
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H ++ FEG+ V +L +MY K G +
Sbjct: 144 VHCFWVRGGFEGNVFVETALVDMYSKFGCMG----------------------------- 174
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
AR+LF M ERNV++WNA+++GY+ +EA+D LMR+ +D T+ ++
Sbjct: 175 --VARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPA 232
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
+ +++G +HGFI R Y ++ + AL+D+Y + A F +MS + D +
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVK-DVAA 291
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFV 503
W +LTG++ + A+ F++M + +L++C++ +L+QG+++H
Sbjct: 292 WTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALA 351
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
I+ C+ N+ A++++Y C LE A R F DV+ N+MI G N G +A+
Sbjct: 352 IKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAI 411
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
++F MK G+ PD TF +L AC H G V LQ F M +IP L+HY C+I +
Sbjct: 412 DLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDI 471
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
R G + F+N MPF P + + CR +G LG ++++ E+ P
Sbjct: 472 LGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEP 525
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/575 (25%), Positives = 259/575 (45%), Gaps = 80/575 (13%)
Query: 39 PVSYSLYAHL---------------FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
PV+++ Y HL + K + +++ + ++T T FL N
Sbjct: 3 PVNFNFYRHLSSNPTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSL 62
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+ Y CG L DA+ +F P ++ SW ++ +N +++F +M N
Sbjct: 63 MNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNA 122
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+T ++VL + A + ++K +H V+ GF GNV +E++LVD Y K M AR++F+
Sbjct: 123 VTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFES 182
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ +N V+WN IV Y G +EA+ +F M R+ + +T + + A + G
Sbjct: 183 MSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IHG II+ +E D + +L ++YV ++DA + + +++ +WT +++G++ S
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFS-S 301
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
GR +R + +N ML L D + L IL
Sbjct: 302 GR----------HWDRAIKHFNKMLGIQNLKL-------------------DSIALMGIL 332
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
+ C+ ++ G+ VH + +++NIFV +A++DMY CGNL A+ +FY M + +D
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-KDV 391
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF 502
V WNA++ G G +A+ F +M+ P + TF ++L AC++ + +G QI
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+++ + I +L C ILG R +
Sbjct: 452 MVKTSHVI----------------------------PNLQHYACVIDILG-----RAGQL 478
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
+ + +PD + +L AC GN+KL
Sbjct: 479 DAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLG 513
>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 173/611 (28%), Positives = 282/611 (46%), Gaps = 37/611 (6%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y K G++++A LF + D SW M+ + Q G + L +++DM +GV N+
Sbjct: 83 IDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGKWSQALRIYIDMIKAGVYPNE 142
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
T+ VL ++A L L K +H ++ G N++++++LV Y KC M DA R+
Sbjct: 143 FTFVKVL-AAAGFLGLKHGKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKL 201
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+ W I+ +EAVV F +M I NFT+ + L ACS + S G
Sbjct: 202 TPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGILSNNFTYLSILNACSLILSLDLG 261
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
QIH +I E D V +L +MY+KC S
Sbjct: 262 RQIHARVIMAGLEDDIPVGNALVDMYMKC------------------------------S 291
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
+ + +F + +VISW +++AG + + + D M + + VTL +IL
Sbjct: 292 HEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIIL 351
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY--QMSQRR 441
C ++HG + + + +I VSNAL+D Y GN R W MSQR
Sbjct: 352 RSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAY--AGNERVDDAWHLIRNMSQR- 408
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
D +++ + T + G E A+ + M + + ++ L+A A ++S+E G Q+H
Sbjct: 409 DALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLH 468
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ +++ ++ LV Y KC A R F E D++ N +I
Sbjct: 469 SYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHIS 528
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
AL F M+ G+KPD +TF +L C H G V + L++F+SM+ +GI PQL+HY C+
Sbjct: 529 SALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCL 588
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
L R G ++E + + MP P + + + C+ + LGE A R +L+P P
Sbjct: 589 FDLLGRAGRLEEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDP 648
Query: 681 FQFKITTNRFD 691
+ N +D
Sbjct: 649 AFNLMLANLYD 659
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 242/533 (45%), Gaps = 34/533 (6%)
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
MP RD SW +L AY ++ L +F +M SG N+ T+++VLR+ + E
Sbjct: 1 MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +HG ++K GF N IL S L+D Y K + +A R+F ++N + VSW ++ + A
Sbjct: 61 KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQA 120
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G +A+ ++ M++ + P FTF L A FL + G +H +I E + VV
Sbjct: 121 GKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKH-GKVVHAHLIVFGVELNLVVK 179
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L MY KC R++DA + E + WT+I+SG A + ++REA F EM ++
Sbjct: 180 TALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGIL 239
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
S N F +L ILN C+ + + +G+++H +
Sbjct: 240 SNN-----------------FTYLS--------------ILNACSLILSLDLGRQIHARV 268
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+I V NAL+DMY KC + + ++ + D +SW +++ G + G + +
Sbjct: 269 IMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGS 328
Query: 463 MTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
S+ EM +P+ T +L +C S Q ++H VI+ + ++ ALV+
Sbjct: 329 FDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDA 388
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y ++ A + + S D + + AL V M + IK D +
Sbjct: 389 YAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSM 448
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
G L A +V+ +Q S K G+ + ++ Y + G ++ E
Sbjct: 449 AGFLSASAGLNSVETGMQLH-SYSVKSGLGSSISVSNGLVSFYGKCGLTRDAE 500
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 201/439 (45%), Gaps = 34/439 (7%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ + ++L+ F + + + Y KC +DDA + PE D W A+L
Sbjct: 159 HGKVVHAHLIVFGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLA 218
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
QN + F +M SG+ +N TY ++L + + L L + +Q+H ++ G ++
Sbjct: 219 QNLKLREAVVAFQEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIP 278
Query: 180 LESSLVDAYGKC-MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ ++LVD Y KC + D R+F+ I++ + +SW ++ G + + + +M
Sbjct: 279 VGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTAS 338
Query: 239 DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
++P + T + L +C S + +++HG +IK + + D V +L + Y R++DA
Sbjct: 339 GLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDA 398
Query: 299 RGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWK 358
L+ +R+ +++T + + G A + N M ++
Sbjct: 399 WHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDI----------------- 441
Query: 359 EALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
+D ++ L+ AGL+ ++ G ++H + ++ S+I VSN L+
Sbjct: 442 --------------KMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLV 487
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
Y KCG R A F ++ + D VSWN +++ A G A+++F +M+ +P
Sbjct: 488 SFYGKCGLTRDAERAFAEI-REPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDS 546
Query: 478 FTFETLLAACANISSLEQG 496
TF +L C + ++ G
Sbjct: 547 VTFLLVLFTCTHCGLVDMG 565
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 183/451 (40%), Gaps = 79/451 (17%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN-LDDARGLFDEM 103
Y + C+ ++ R++ + ++ + + N ++ Y KC + ++D +F+ +
Sbjct: 245 YLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGI 304
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
D SW +++ +++GF + + +++M SG+ N +T + +LRS
Sbjct: 305 ESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLL 364
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+LHG ++K ++ + ++LVDAY + DA + ++ ++A+++ + R G
Sbjct: 365 KLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMG 424
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ + A+ + M +DI+ ++ A L A + L+S GMQ+H +K V
Sbjct: 425 HHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSN 484
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
L Y KCG DA + E +I+SW ++S A G I A F++
Sbjct: 485 GLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDD-------- 536
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG-------K 396
MR T D VT L+L C + MG K
Sbjct: 537 -----------------------MRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMK 573
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E+HG + D+ +F D+ + G L
Sbjct: 574 EMHGIEPQLDHYVCLF------DLLGRAGRL----------------------------- 598
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
EEAM M RP+ ++TLLAAC
Sbjct: 599 ---EEAMEILETM--PIRPNASIYKTLLAAC 624
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 182/654 (27%), Positives = 309/654 (47%), Gaps = 52/654 (7%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC---------- 90
SY+ ++ + CA ++++ + L +++ + + N + Y C
Sbjct: 104 SYT-FSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTA 162
Query: 91 ---GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
N D R +FD M +R+ +WN M+ Y + ++F M G+ +++
Sbjct: 163 YDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFV 222
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
NV + + + L+GL+VK G F + + SS + Y + + AR +FD
Sbjct: 223 NVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCL 282
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGM 264
+N WN ++ Y+ EA+ +F +++ + L+ TF +AL A S L G
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGR 342
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+H I+K V+L ++ MY +CG
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGS------------------------------ 372
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
I + ++F+ M ER+V++WN M++ + ++ L E L VF M+K +D VTL +L+
Sbjct: 373 -IGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLS 431
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ-RRDK 443
+ + L ++GK+ H ++ R+ + + L+DMY K G + +A+ F + S RD+
Sbjct: 432 LASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDE 490
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
+WNA++ GY + G SEE F +M + RP+ T ++L AC + ++ GKQIH F
Sbjct: 491 ATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGF 550
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
IR NV AL+++Y+K + YA VF E+ + + +MI + + G A
Sbjct: 551 AIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERA 610
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L +F M GIKPD +TF IL AC + G V L+ F SM +Y I P EHY C+
Sbjct: 611 LSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVAD 670
Query: 623 LYCRYGYMKELEDFVNRM-PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ R G + E +FV + T + + CR +G LG+ A +L E+
Sbjct: 671 MLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEM 724
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 249/537 (46%), Gaps = 54/537 (10%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANV 149
G+ A LFD +P WN ++ + N P L + M S + T+++
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------- 196
L++ A+ L + K LH +++ F + I+ +SL++ Y C+
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+FD ++ +N V+WN ++ Y+ EA MF M+R IRP +F N A
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 257 LSSPYEGMQIHGVIIKI--DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
+S ++G+++K+ DF D V+ S MY + G ++
Sbjct: 231 MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVD------------------ 272
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKD 373
ARE+F+ ERN WN M+ GY ++ EA+D FV +M
Sbjct: 273 -------------FAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFV 319
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+D VT L + L +++G+++H +I ++ + + NA++ MY +CG++ ++
Sbjct: 320 LDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISS 492
F M + RD V+WN +++ + + G +E + MQ + T LL+ +N+ S
Sbjct: 380 FSNMLE-RDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRS 438
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL--DVIICNSMI 550
E GKQ H ++IR+ + + L+++Y K + A ++F+++S D N+MI
Sbjct: 439 QEIGKQAHAYLIRHGIQFEGM-DSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMI 497
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD-SMRC 606
G+ N E VF M ++ ++P+ +T IL AC G + L Q ++RC
Sbjct: 498 AGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRC 554
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 38/372 (10%)
Query: 84 IECYGKCGNLDDARGLFDEMPE--RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I+ Y K G + A+ LF++ + RD +WNAM+ YTQNG +F M V
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +T A++L + +G+ KQ+HG ++ NV + ++L+D Y K +T A +F
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVF 583
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ KN+V++ ++ Y G G+ A+ +F ML I+P + TF L ACS+
Sbjct: 584 AETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643
Query: 262 EGMQIHGVI---IKIDFEGDDVVLGSLTEMYVKCGRLEDA----RGLLDQPDERNIISWT 314
EG++I + KI + + +M + GR+ +A +GL ++ + I W
Sbjct: 644 EGLRIFQSMEREYKIQPSAEHYC--CVADMLGRVGRVVEAYEFVKGLGEEGNTFGI--WG 699
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ I G + + N++ E + + L GY L ++ ++
Sbjct: 700 SLLGACRIHGEFELGKVVANKLLE---MEKGSSLTGY------HVLLSNIYAAEGNWDNV 750
Query: 375 DQV-----TLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDM------ 420
D+V GL+ AG S +++ V+ F+ H++ + I+ L M
Sbjct: 751 DRVRKEMRQKGLMKE--AGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAG 808
Query: 421 YRKCGNLRSARI 432
Y+ C NL++ I
Sbjct: 809 YKPCLNLQTGGI 820
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 20/323 (6%)
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT-TKDIDQVTLGLI 382
G +A LF+ +P + WN ++ G+ + + +AL F MR + + D T
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC-------------GNLRS 429
L CA +K+GK +H + R+ + S+ V N+LL+MY C N
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLLAACA 488
R F M ++R+ V+WN +++ Y + + EA F + M+ RP+ +F + A
Sbjct: 171 VRRVFDTM-RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 489 NISSLEQGKQIHCFVIR--NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
+S + ++ V++ + + + + + +Y + C+++A +F + +
Sbjct: 230 RMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 547 NSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
N+MI G+ N EA+++F +M+ E D +TF L A ++L Q +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYI- 348
Query: 606 CKYGIIPQLEHYECMIKLYCRYG 628
K I Q+ +I +Y R G
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCG 371
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 273/558 (48%), Gaps = 37/558 (6%)
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
+NH + YA+++ +S + L Q+H +V G N L + LV+
Sbjct: 47 VNHDHCFNSDSFYASLIDNSTHKRHL---DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQ 103
Query: 194 MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
+ AR++FD+ + WN I+R Y ++ V M+ M + P FTF L A
Sbjct: 104 ICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKA 163
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ L IHG IIK F D V L +Y KCG
Sbjct: 164 CTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH------------------- 204
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
I A+ +F+ + R ++SW ++++GY ++ EAL MR
Sbjct: 205 ------------IGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
D + L IL + +++ G+ +HGF+ + + +L Y KCG + A+ +
Sbjct: 253 PDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSF 312
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISS 492
F QM + + + WNA+++GYA+ G +EEA+ F M +P T + + A A + S
Sbjct: 313 FDQM-KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGS 371
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
LE + + +V ++ Y ++ +L+++Y KC +E+A RVF +S DV++ ++MI+G
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
+ + +G EA+ ++ +MK+ G+ P+ +TF G+L AC H G VK + F M+ + I+P
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK-DFEIVP 490
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+ EHY C++ L R GY+ E F+ ++P P V + + C+ TLGE+AA +L
Sbjct: 491 RNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKL 550
Query: 673 NELNPWAPFQFKITTNRF 690
L+P+ + +N +
Sbjct: 551 FSLDPYNTGHYVQLSNLY 568
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 217/426 (50%), Gaps = 34/426 (7%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
FL+ + + G + AR LFDE D WNA++ +Y++N T+E++ M +
Sbjct: 89 FLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWT 148
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
GV + T+ VL++ E L+ G+S +HG I+K GF +V +++ LV Y KC + A
Sbjct: 149 GVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVA 208
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+ +FD + ++ VSW I+ Y G EA+ MF +M ++P + L A + +
Sbjct: 209 KVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDV 268
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+G IHG +IK+ E + +L SLT Y KCG + A+ DQ N+I W +++
Sbjct: 269 DDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMI 328
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
SGYA +G EA LF+ M RN+ D V
Sbjct: 329 SGYAKNGHAEEAVNLFHYMISRNI-------------------------------KPDSV 357
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ + A + +++ + + ++ +++Y S+IFV+ +L+DMY KCG++ AR F +
Sbjct: 358 TVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRN 417
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
S +D V W+A++ GY GQ EA+ + M Q P+ TF LL AC + +++G
Sbjct: 418 SD-KDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEG 476
Query: 497 KQI-HC 501
++ HC
Sbjct: 477 WELFHC 482
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 155/296 (52%), Gaps = 4/296 (1%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ N + Y KCG++ A+ +FD + R SW +++ Y QNG L +F M +
Sbjct: 189 VFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRN 248
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+GV + I ++LR+ + +L + +HG ++K G L SL Y KC ++T
Sbjct: 249 NGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTV 308
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A+ FD ++ N + WN ++ Y G+ +EAV +F M+ +I+P + T +A+ A +
Sbjct: 309 AKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQ 368
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ S + + K ++ D V SL +MY KCG +E AR + D+ +++++ W+++
Sbjct: 369 VGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAM 428
Query: 317 VSGYAISGRIREARELFNEMPERNV----ISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ GY + G+ EA L++ M + V +++ +L S L KE + M+
Sbjct: 429 IMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMK 484
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 270/549 (49%), Gaps = 65/549 (11%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVD--AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
K++H ++ G + S LV A + + ++ ++ N N SWN+ +R Y+
Sbjct: 71 KEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYV 130
Query: 221 VAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
+ N AV+++ MLR+ P N+T+ C+ S + +I G +I++ F+ D
Sbjct: 131 ESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDL 190
Query: 280 VVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER 339
V ++ + V CG L AR+LF+E R
Sbjct: 191 FVHNAIIHVLVSCGEL-------------------------------LAARKLFDESCVR 219
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+++SWN+++ GY R L EA D + M + D+VT+ +++ A L + +G+++H
Sbjct: 220 DLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLH 279
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR------------------- 440
I + + ++NAL+DMY KC N+ +A+I F M+++
Sbjct: 280 QSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLE 339
Query: 441 -----------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACA 488
+D V WNA++ G+ + +S+EA+ F EMQ + P K T L+AC+
Sbjct: 340 SAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACS 399
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ +L+ G +H +V ++ +NV ALV++Y KC ++ AI+VF+E + + +
Sbjct: 400 QLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTA 459
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+I G + + A+ F M G+ PD ITF G+L AC H G V +F M KY
Sbjct: 460 IICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKY 519
Query: 609 GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWA 668
GI P+L+HY C++ L R G+++E E+ + MPF P + +F R +G +GE A
Sbjct: 520 GISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERA 579
Query: 669 ARRLNELNP 677
A +L EL+P
Sbjct: 580 ASKLLELDP 588
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 250/482 (51%), Gaps = 13/482 (2%)
Query: 27 TKTISGHLKSDEPVSYSLYAHLFQ------LCASSKAIVEARKLESNLVTFYPTPPVFLL 80
T+++ H D+P +++ L Q L + ++ + +++ + +++ F L
Sbjct: 32 TRSLPHH--KDKPTNWNASHVLIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFAL 89
Query: 81 NRAIE--CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
+R + + NLD + + + SWN + Y ++ P + L+ +M G
Sbjct: 90 SRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKG 149
Query: 139 VS-ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + TY + + A + ++ G +++ GF ++ + ++++ C + A
Sbjct: 150 SAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAA 209
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD+ ++ VSWN I+ Y+ G EA +++KM ++ P T + A + L
Sbjct: 210 RKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQL 269
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ G ++H I ++ + +L +MY+KC +E A+ L + ++ ++SWT++V
Sbjct: 270 ENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMV 329
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
GYA G + A LFNEMPE++V+ WNA++ G+ ++ KEAL M+ ++ D++
Sbjct: 330 IGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKI 389
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
T+ L+ C+ L + +G +H ++ +++ + N+ + AL+DMY KCGN++ A F +M
Sbjct: 390 TVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEM 449
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
R+ ++W A++ G A GQ A++ FSEM P + TF +L+AC + ++QG
Sbjct: 450 PG-RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQG 508
Query: 497 KQ 498
+
Sbjct: 509 RD 510
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/521 (22%), Positives = 214/521 (41%), Gaps = 82/521 (15%)
Query: 29 TISGHLKSDEPVSYSL-----------------YAHLFQLCASSKAIVEARKLESNLVTF 71
I G+++S+ P++ L Y LF++CA A ++ +++
Sbjct: 125 AIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQL 184
Query: 72 YPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
+F+ N I CG L AR LFDE RD SWN+++ Y + G +L+
Sbjct: 185 GFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLY 244
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKC 191
M V +++T V+ +SA+ L + ++LH I + G V L ++L+D Y KC
Sbjct: 245 YKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKC 304
Query: 192 M-------------------------------VMTDARRMFDDIQNKNAVSWNVIVRRYL 220
++ A R+F+++ K+ V WN ++ ++
Sbjct: 305 KNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFV 364
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
A KEA+ +F +M + P T N L ACS L + G+ +H + K + +
Sbjct: 365 QAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVA 424
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +L +MY KCG ++ A + ++ RN ++WT+I+ G A+ G+ A F+EM
Sbjct: 425 LGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIG 484
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE-VH 399
++ D++T +L+ C + G++ +
Sbjct: 485 LVP-------------------------------DEITFIGVLSACCHGGLVDQGRDYFY 513
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ S + + L+D+ + G L A M D V W A+ G G
Sbjct: 514 QMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNV 573
Query: 460 EEAMTSFSEMQWETRPSKFTFETLLAACANISSL-EQGKQI 499
+ S++ E P LLA +++ EQ +++
Sbjct: 574 HMGERAASKLL-ELDPHDGGIYVLLANMYGDANMWEQARKV 613
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/610 (26%), Positives = 291/610 (47%), Gaps = 40/610 (6%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
KCG+ A LFD+M + + ++N+++ Y Q + + LF G+ ++ A
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
L + ++ L K +HGLI+ G V+L +SL+D Y KC + AR +FD +
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS--FLSSPYEGMQI 266
VSWN ++ Y+ G +E + + KM + + +T +AL ACS F G +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H IK+ D VV +L +MY K +G +
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAK-------------------------------TGSL 221
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKE-----ALDFVFLMRKTTKDIDQVTLGL 381
+A ++F++M ++NV+ +NAM+AG + ++ AL+ F M+ T
Sbjct: 222 DDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSS 281
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
+L C + + K K+VH + +N S+ ++ + L+D+Y G++ A + F +
Sbjct: 282 LLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI-HNL 340
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIH 500
V A++ GY + G+ E A++ F E+ +E +P +F F T++++CAN+ L G+QI
Sbjct: 341 TIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQ 400
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ + + + + +Y K L A F++ + D++ ++MI +
Sbjct: 401 GHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAM 460
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EAL F LMK GI+P+H F G+L+AC H G V+ L++FD+M Y + ++H C+
Sbjct: 461 EALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCV 520
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAP 680
+ L R G + + E + R+ F M R + CR + + A+++ EL P A
Sbjct: 521 VDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLAS 580
Query: 681 FQFKITTNRF 690
+ + N +
Sbjct: 581 ASYVLLYNIY 590
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 209/454 (46%), Gaps = 42/454 (9%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ S + + + ++ + V L N I+ Y KCG +D AR LFD + DG SW
Sbjct: 77 CSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSW 136
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE--LGVSKQLHGLI 169
N+++ Y QNG L + M+ +G++ N T + L++ + LH
Sbjct: 137 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 196
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN----- 224
+K G +V++ ++L+D Y K + DA ++FD + +KN V +N ++ L
Sbjct: 197 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 256
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+A+ +FF+M I+P FT+++ L AC + Q+H ++ K D+ +
Sbjct: 257 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 316
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L ++Y G + DA + I+ T+++ GY +G A LF E+
Sbjct: 317 LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYEL-------- 368
Query: 345 NAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
L ++E D F+F I++ CA + ++ G+++ G
Sbjct: 369 ----------LTYEEKPDEFIF--------------STIMSSCANMGMLRSGEQIQGHAT 404
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ S N+ + MY K G+L +A + F QM + D VSW+ ++ A+ G + EA+
Sbjct: 405 KVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQM-ENPDIVSWSTMICSNAQHGHAMEAL 463
Query: 464 TSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
F M+ P+ F F +L AC++ +E+G
Sbjct: 464 RFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 497
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 9/298 (3%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ-----NGFPGRTLELFLDMNHSG 138
++ Y K G+LDDA +FD+M +++ +NAM+ Q + + L LF +M G
Sbjct: 212 LDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCG 271
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ + TY+++L++ + +KQ+H L+ K G + + S L+D Y M DA
Sbjct: 272 IKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDAL 331
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F+ I N V ++ YL G + A+ +F+++L + +P F F+ + +C+ +
Sbjct: 332 LCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMG 391
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QI G K+ + S MY K G L A Q + +I+SW++++
Sbjct: 392 MLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMIC 451
Query: 319 GYAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
A G EA F M E N ++ +L + L +E L + M K K
Sbjct: 452 SNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYK 509
Score = 39.3 bits (90), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 43/107 (40%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+++ + CA+ + +++ + + N I Y K G+L A F +M
Sbjct: 379 IFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQM 438
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
D SW+ M+ + Q+G L F M G+ N + VL
Sbjct: 439 ENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVL 485
>gi|357139479|ref|XP_003571309.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Brachypodium distachyon]
Length = 668
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 251/484 (51%), Gaps = 3/484 (0%)
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHG 268
A WN+++ Y K+ ++ + +M+ + FT+ + L AC L G +I+
Sbjct: 110 AFPWNLLIWGYAGDRLWKDVIMAYDRMVALGVDADRFTYPSVLRACGELREVSVGRKINR 169
Query: 269 VIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIRE 328
I + + D V +L MYVK G LEDAR + D R+++SW ++VSGYA +G E
Sbjct: 170 RIRRRRHDLDMHVWNALVGMYVKFGELEDARRVFDGMAGRDVVSWNTMVSGYASTGMWGE 229
Query: 329 ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT-TKDIDQVTLGLILNVCA 387
A EL ++P N ++WNA+ AG ++ + E + MR +D V+L + L C
Sbjct: 230 AFELLQQVPGANTVTWNAVAAGNLKAGNYDEVFRLLSQMRNCHGPGVDSVSLLIGLKACG 289
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+++G+EVHG R + V N+L+ MY +C + SA + F +M R ++WN
Sbjct: 290 KSGSLRVGREVHGVAVRLYFDGLECVVNSLITMYSRCRIMSSAELLF-RMCLVRSIIAWN 348
Query: 448 AVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRN 506
++L G+ + EEA + F EM P+ T TL++ A L G+++HC+++R+
Sbjct: 349 SLLVGFVFMDKVEEASSLFREMIGSGVCPNDVTVLTLVSLAARFGHLCHGRELHCYILRH 408
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+ + + +LV++Y+K + + RVF D S+ILG+ G +L++F
Sbjct: 409 GLGGSKLLQNSLVDMYSKSRHMTASQRVFDRMELRDKHAYTSLILGYGMQREGHVSLKLF 468
Query: 567 GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
M I+PDH+T L AC H G V F M +G P++EH+ CM+ LYCR
Sbjct: 469 DEMIANCIEPDHVTMVAALSACSHSGLVTQGQLLFTKMFAVFGTAPRVEHFSCMVDLYCR 528
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKIT 686
G +K E+ + +M F PT ML + + C +G +GE AA++L + P +K+
Sbjct: 529 EGLLKMAEEIIGKMQFQPTPAMLATLVEACLIHGNIEIGERAAKKLLTMRTNNPGHYKLI 588
Query: 687 TNRF 690
N +
Sbjct: 589 ANMY 592
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 129/587 (21%), Positives = 239/587 (40%), Gaps = 111/587 (18%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN ++ Y + + + M GV A++ TY +VLR+ E E+ V ++++ I
Sbjct: 113 WNLLIWGYAGDRLWKDVIMAYDRMVALGVDADRFTYPSVLRACGELREVSVGRKINRRIR 172
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+R ++ + ++LV Y K + DARR+FD + ++ VSWN +V Y G EA
Sbjct: 173 RRRHDLDMHVWNALVGMYVKFGELEDARRVFDGMAGRDVVSWNTMVSGYASTGMWGEAFE 232
Query: 231 MFFKMLREDIRPLNFTFAN--------------------------------ALFACSFLS 258
+ ++ + N A L AC
Sbjct: 233 LLQQVPGANTVTWNAVAAGNLKAGNYDEVFRLLSQMRNCHGPGVDSVSLLIGLKACGKSG 292
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
S G ++HGV +++ F+G + V+ SL MY +C + A L R+II+W S++
Sbjct: 293 SLRVGREVHGVAVRLYFDGLECVVNSLITMYSRCRIMSSAELLFRMCLVRSIIAWNSLLV 352
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
G+ ++ EA LF EM V + VT
Sbjct: 353 GFVFMDKVEEASSLFREMIGSGVCP-------------------------------NDVT 381
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
+ ++++ A + G+E+H +I R+ + + N+L+DMY K ++ +++ F +M
Sbjct: 382 VLTLVSLAARFGHLCHGRELHCYILRHGLGGSKLLQNSLVDMYSKSRHMTASQRVFDRM- 440
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGK 497
+ RDK ++ +++ GY + + ++ F EM P T L+AC++ + QG+
Sbjct: 441 ELRDKHAYTSLILGYGMQREGHVSLKLFDEMIANCIEPDHVTMVAALSACSHSGLVTQGQ 500
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+ +TK VF + ++ C M+ +C
Sbjct: 501 LL----------------------FTK------MFAVFGTAPRVEHFSC--MVDLYCREG 530
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL---ALQFFDSMRCKYGIIPQL 614
+ A E+ G M+ +P ++ AC+ GN+++ A + +MR
Sbjct: 531 LLKMAEEIIGKMQ---FQPTPAMLATLVEACLIHGNIEIGERAAKKLLTMRTN-----NP 582
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRM-----PFNPTVPMLRKIFDKC 656
HY+ + +Y EL + M P+ +L ++D C
Sbjct: 583 GHYKLIANMYIFAKCWPELAKVRSLMSTIELAMIPSHSLLESVYDIC 629
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM------ 134
N + Y K G L+DAR +FD M RD SWN M+ Y G G EL +
Sbjct: 184 NALVGMYVKFGELEDARRVFDGMAGRDVVSWNTMVSGYASTGMWGEAFELLQQVPGANTV 243
Query: 135 --------------------------NHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
N G + ++ L++ + L V +++HG+
Sbjct: 244 TWNAVAAGNLKAGNYDEVFRLLSQMRNCHGPGVDSVSLLIGLKACGKSGSLRVGREVHGV 303
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
V+ F G + +SL+ Y +C +M+ A +F ++ ++WN ++ ++ +EA
Sbjct: 304 AVRLYFDGLECVVNSLITMYSRCRIMSSAELLFRMCLVRSIIAWNSLLVGFVFMDKVEEA 363
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+F +M+ + P + T + + G ++H I++ G ++ SL +M
Sbjct: 364 SSLFREMIGSGVCPNDVTVLTLVSLAARFGHLCHGRELHCYILRHGLGGSKLLQNSLVDM 423
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
Y K + ++ + D+ + R+ ++TS++ GY + + +LF+EM
Sbjct: 424 YSKSRHMTASQRVFDRMELRDKHAYTSLILGYGMQREGHVSLKLFDEM 471
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ C S ++ R++ V Y ++N I Y +C + A LF R
Sbjct: 285 LKACGKSGSLRVGREVHGVAVRLYFDGLECVVNSLITMYSRCRIMSSAELLFRMCLVRSI 344
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+WN++L + LF +M SGV N +T ++ +A L ++LH
Sbjct: 345 IAWNSLLVGFVFMDKVEEASSLFREMIGSGVCPNDVTVLTLVSLAARFGHLCHGRELHCY 404
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
I++ G G+ +L++SLVD Y K MT ++R+FD ++ ++ ++ ++ Y + G +
Sbjct: 405 ILRHGLGGSKLLQNSLVDMYSKSRHMTASQRVFDRMELRDKHAYTSLILGYGMQREGHVS 464
Query: 229 VVMFFKMLREDIRPLNFTFANALFACS 255
+ +F +M+ I P + T AL ACS
Sbjct: 465 LKLFDEMIANCIEPDHVTMVAALSACS 491
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 180/698 (25%), Positives = 314/698 (44%), Gaps = 82/698 (11%)
Query: 22 PSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFL 79
PS TL + LK P++ + + L C K + E ++L +++ P
Sbjct: 7 PSSTLL--VPASLKEANPITRNSSSKLLVNC---KTLKELKQLHCDMMKKGLLCHKPASN 61
Query: 80 LNRAIECYGKCG---NLDDARGLFDEMPERDGGS------WNAMLGAYTQNGFPGRTLEL 130
LN+ I + G +LD AR F + D G+ +N ++ Y G + + L
Sbjct: 62 LNKLIASSVQIGTLESLDYARNAFGD----DDGNMASLFMYNCLIRGYASAGLGDQAILL 117
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
++ M G+ ++ T+ +L + ++ L L Q+HG ++K G G++ + +SL+ Y +
Sbjct: 118 YVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAE 177
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + R++FD + +N VSW ++ Y KEAV +FF+M + P T
Sbjct: 178 CGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCV 237
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
+ AC+ L G ++ I ++ E +++ +L +MY+KCG + AR + D+ +N+
Sbjct: 238 ISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNL 297
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+ + +I+S Y + +E ++ + ML R
Sbjct: 298 VMYNTIMSNY-----------VHHEWASDVLVILDEMLQKGPRP---------------- 330
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA 430
D+VT+ + CA L ++ +GK H ++ RN +SNA++DMY KCG +A
Sbjct: 331 ----DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAA 386
Query: 431 RIWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSE 460
F M + RD VSWN ++ + E
Sbjct: 387 CKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFE 446
Query: 461 EAMTSFSEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
EA+ F EMQ + P + T + +AC + +L+ K + ++ +N +++ ALV
Sbjct: 447 EAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALV 506
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+++++C A+ VFK DV + I A+E+F M ++ +KPD +
Sbjct: 507 DMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDV 566
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
F +L AC H G+V Q F SM +GI P + HY CM+ L R G ++E D +
Sbjct: 567 VFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQS 626
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
MP P + + CRK+ L +AA +L +L P
Sbjct: 627 MPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAP 664
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/555 (27%), Positives = 284/555 (51%), Gaps = 8/555 (1%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ + L C+ A+ E ++ ++ +F+ N I Y +CG +D R
Sbjct: 128 PDKYT-FPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRK 186
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
LFD M ER+ SW +++ Y+ + LF M +GV N +T V+ + A+ +
Sbjct: 187 LFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKD 246
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L + K++ I + G + I+ ++LVD Y KC + AR++FD+ NKN V +N I+
Sbjct: 247 LELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSN 306
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ + +V+ +ML++ RP T + + AC+ L G H +++ EG
Sbjct: 307 YVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGW 366
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
D + ++ +MY+KCG+ E A + + + +++W S+++G G + A +F+EM E
Sbjct: 367 DNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLE 426
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R+++SWN M+ + +++EA++ M+ D+VT+ I + C L + + K V
Sbjct: 427 RDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWV 486
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+I +ND ++ + AL+DM+ +CG+ SA F +M ++RD +W A + A G
Sbjct: 487 CTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM-EKRDVSAWTAAIGVMAMEGN 545
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVCR 515
+E A+ F+EM + + +P F LL AC++ S++QG+Q+ + + + I ++V
Sbjct: 546 TEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLF-WSMEKAHGIRPHIVHY 604
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
G +V++ + LE A+ + + + +L C + E L + K +
Sbjct: 605 GCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVE-LAHYAAEKLTQLA 663
Query: 576 PDHITFHGILLACIH 590
P+ + H +LL+ I+
Sbjct: 664 PERVGIH-VLLSNIY 677
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 255/514 (49%), Gaps = 41/514 (7%)
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LV Y C + + RR+FD ++ KN WN +V Y G+ KE++ +F M+ + I
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 244 NFTFANALF---------ACSFLSSPY--EGMQIHGVII--KIDFEGDDVVLGSLTEMYV 290
A+ LF + + + S Y G+ G+ I ++ + G DV L ++ + V
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 291 KC---GRLEDARGL----LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
C G L + + + ER I +++ Y+ G + A +F +M ERNV+S
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
W +M+AGYTR A+ + M K +D V + IL+ CA + GK+VH +I
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
N+ +SN+FV NAL+DMY KCG++ A F M + D +SWN
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNT--------------- 285
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
M E +P T +L ACA++S+LE+GK+IH +++RN Y + ALV++Y
Sbjct: 286 -----MVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 340
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC L A +F S D++ MI G+ + G EA+ F M+ GI+PD ++F
Sbjct: 341 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 400
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
IL AC H G ++ +FF M+ + I P+LEHY CM+ L R G + + F+ +P
Sbjct: 401 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA 460
Query: 644 PTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR L E A R+ EL P
Sbjct: 461 PDATIWGALLCGCRIYHDIELAEKVAERVFELEP 494
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 190/436 (43%), Gaps = 56/436 (12%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA S + + + S + + N ++ Y KCG+LD A +F++M ER+ SW
Sbjct: 123 CAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 182
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
+M+ YT++G+ + L M GV + + ++L + A L K +H I
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 242
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
N+ + ++L+D Y KC M A +F + K+ +SWN +V
Sbjct: 243 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV--------------- 287
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+++P + T A L AC+ LS+ G +IHG I++ + D V +L ++YVK
Sbjct: 288 ------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
CG L AR L D ++++SWT +++GY + G EA FNEM + +
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGI---------- 391
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ D+V+ IL C+ ++ G +I +ND++
Sbjct: 392 ---------------------EPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEP 429
Query: 412 FVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ + ++D+ + GNL A + + D W A+L G R E +E
Sbjct: 430 KLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG-CRIYHDIELAEKVAER 488
Query: 470 QWETRPSKFTFETLLA 485
+E P + LLA
Sbjct: 489 VFELEPENTGYYVLLA 504
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 32/320 (10%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ CA S ++ + + + +F+ N ++ Y KCG+++ A +F M +D
Sbjct: 220 ILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKD 279
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SWN M+G + + T A +L + A L K++HG
Sbjct: 280 IISWNTMVGE---------------------LKPDSRTMACILPACASLSALERGKEIHG 318
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I++ G+ + + ++LVD Y KC V+ AR +FD I +K+ VSW V++ Y + G G E
Sbjct: 319 YILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNE 378
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSL 285
A+ F +M I P +F + L+ACS +G + I+K DF + + +
Sbjct: 379 AIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACM 437
Query: 286 TEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI----REARELFNEMPERN 340
++ + G L A ++ P + W +++ G I I + A +F PE
Sbjct: 438 VDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENT 497
Query: 341 VISWNAMLAG-YTRSLLWKE 359
+ +LA Y + W+E
Sbjct: 498 --GYYVLLANIYAEAEKWEE 515
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 240/483 (49%), Gaps = 33/483 (6%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
++ +F ++ N WN ++R + +A+ ++ M P NFT L AC+
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G++IH +++K ++ D V SL +YVKC +DA
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDAL----------------- 169
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++F+++P++NV+SW A++ GY S ++EA+ + + D
Sbjct: 170 --------------KVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDS 215
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L +L CA L + G+ + +I + N+FV+ +LLDMY KCGNL A + F
Sbjct: 216 FSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSA 275
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
M ++ D VSW+ ++ GYA G ++A+ F +MQ E +P +T +L+ACA + +L+
Sbjct: 276 MPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G + RN + N V AL+++Y+KC + A +F D ++ N+M++G
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSM 394
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
N + +F L++K GI+PD TF G+L C H G V QFF++M+ + + P +E
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIE 454
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G + E +N MP P + + C+ + L E ++L EL
Sbjct: 455 HYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIEL 514
Query: 676 NPW 678
PW
Sbjct: 515 EPW 517
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 218/440 (49%), Gaps = 33/440 (7%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ + + + L+ + +LLN + C G+ + ++ +F ++ E + WN M+
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+ L+ M G N T VL++ A +L++ + ++H L+VK G+ +V
Sbjct: 91 SKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVF 150
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+++SL+ Y KC DA ++FDDI +KN VSW I+ Y+ +G+ +EA+ F K+L
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
++P +F+ L AC+ L G I I + V SL +MYVKCG LE A
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ E++I+SW++++ GYA FN +P+ +
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYA-----------FNGLPQ--------------------Q 299
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
ALD F M+ D T+ +L+ CA L + +G + RN++ SN + AL+D
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KCG++ A F M +++D+V WNA++ G + G ++ + FS ++ RP +
Sbjct: 360 MYSKCGSVTQAWEIFTAM-KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418
Query: 479 TFETLLAACANISSLEQGKQ 498
TF LL C + + +G+Q
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQ 438
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 176/406 (43%), Gaps = 32/406 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + K+ S LV VF+ + Y KC N DDA +FD++P+++
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW A++ Y +G + F + G+ + + VL + A + + +
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I G NV + +SL+D Y KC + A +F + K+ VSW+ +++ Y G ++
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +FF+M E+++P +T L AC+ L + G+ ++ + +F + V+ +L +
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + A W E+F M +++ + WNAM
Sbjct: 360 MYSKCGSVTQA--------------W-----------------EIFTAMKKKDRVVWNAM 388
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-D 406
+ G + + K L+ K D+ T +L C + G++ + R
Sbjct: 389 MVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFS 448
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ +I ++D+ + G L A M + + V W A+L G
Sbjct: 449 LTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 57/249 (22%)
Query: 473 TRPSKFTFETLLAACANISS----LEQGKQIHCFVIR-----NCYEINVVCRGALVEVYT 523
T PS F L +S+ Q K IH ++R + Y +N++
Sbjct: 5 TNPSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLIL--------- 55
Query: 524 KCCCLE-----YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
CC L+ Y+ VF + ++ + N+MI G + +A+ ++G M+ G P++
Sbjct: 56 -CCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNN 114
Query: 579 ITFHGILLACIHEGNVKLALQF----------------------------FDSMRCKYGI 610
T +L AC + +V+L L+ FD +
Sbjct: 115 FTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDD 174
Query: 611 IPQ--LEHYECMIKLYCRYGYMKELEDFVNR---MPFNPTVPMLRKIFDKCRKNGYATLG 665
IP + + +I Y G+ +E + M P L K+ C + G T G
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 666 EWAARRLNE 674
EW R +++
Sbjct: 235 EWIDRYISD 243
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 273/582 (46%), Gaps = 72/582 (12%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMT----DARRMFDDIQNKNAVSWNVIVRRY 219
Q+H + G + S L+ ++ + R+ ++ NA S N +++
Sbjct: 22 QIHAQFIASGLLADAFAASRLLLFTSASRLLPLPFHHSLRLLRLVRYPNAFSCNTLLKSA 81
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDD 279
L+ G + ++ + P ++T AC+ EG Q+H + F GD+
Sbjct: 82 LIGGMPHLCLPLYASL---PAPPDSYTHPILAAACASRKDVIEGRQVHAHAVSHGF-GDN 137
Query: 280 VVL-GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ L +L MY CG L DAR + D + +SW +I++ Y +G + +A E+F +MP+
Sbjct: 138 LYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQMPK 197
Query: 339 RN-------------------------------VISWNAMLAGYTRSLLWKEALDFVFLM 367
RN + +W AM++ + R+ ++ EAL M
Sbjct: 198 RNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCM 257
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
R+ +D+ + +++ CA I+ G+ HG + R S + V NAL+ MY C ++
Sbjct: 258 RRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDV 317
Query: 428 RSARIWF------------------------------YQMSQRRDKVSWNAVLTGYARRG 457
+AR F + +D VSW+ V++G +
Sbjct: 318 FAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNN 377
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
QS +A+T F MQ + RP + T ++++AC N+S+LE+GK +H ++ +N Y +++V
Sbjct: 378 QSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGT 437
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK-KEGIK 575
+L+ +Y KC CLE A+ F N++I+G N ++L++F M+ +
Sbjct: 438 SLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTAT 497
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ ITF G+L AC H G V FF M+ +Y I+P + HY CM+ L R GY+KE ED
Sbjct: 498 PNEITFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAED 557
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ MP +P VP + C K+G +GE R+L +P
Sbjct: 558 MIQSMPMSPDVPAWGALLGACWKHGEYEVGERVGRKLVNRDP 599
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 236/495 (47%), Gaps = 49/495 (9%)
Query: 34 LKSDEPVSYSLYAH--LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
L + P Y H L CAS K ++E R++ ++ V+ ++L N I Y CG
Sbjct: 93 LYASLPAPPDSYTHPILAAACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACG 152
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
L DAR +FD P D SWN +L AY G + +E+F M
Sbjct: 153 CLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQMP---------------- 196
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
KR N SS+V +G+ ++ +ARR+FD + ++ +
Sbjct: 197 -------------------KR----NATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFT 233
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W ++ + EA+ +F M RE + + AC+ G HG++I
Sbjct: 234 WTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVI 293
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ V +L MY C + AR L D + + SW S+++GY +G +++A
Sbjct: 294 RAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMA 353
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF+ MP ++ +SW+ +++G ++ +AL M+ D+VT+ +++ C LS
Sbjct: 354 LFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSA 413
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ GK VH +I +N Y ++ + +L++MY KCG L +A F M ++ WNAV+
Sbjct: 414 LEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPC-WNAVIV 472
Query: 452 GYARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCY 508
G A G +++ FSEM+ P++ TF +L+AC + +++G+ H F ++++ Y
Sbjct: 473 GLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVDEGR--HFFKLMQHRY 530
Query: 509 EI--NVVCRGALVEV 521
+I N+ G +V++
Sbjct: 531 QIVPNIRHYGCMVDL 545
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 186/438 (42%), Gaps = 64/438 (14%)
Query: 57 AIVEARKLESNLVTFYPTPP--VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
A V A ++ + F P ++ + +G+ G +D+AR +FD RD +W AM
Sbjct: 178 AYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAM 237
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ + +N L +F M ++ +V+ + A+ + + HGL+++ G
Sbjct: 238 ISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGL 297
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
C V ++++L+ Y C+ + ARR+FD + + SWN ++ YL G+ K+A+ +F
Sbjct: 298 CSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSA 357
Query: 235 MLRED-------------------------------IRPLNFTFANALFACSFLSSPYEG 263
M +D IRP T + + AC+ LS+ +G
Sbjct: 358 MPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKG 417
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+H I + + V+ SL MY+KCG LE A + +E+ W +++ G A++
Sbjct: 418 KSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMN 477
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G + ++ ++F+EM EA D T +++T +L
Sbjct: 478 GLVMKSLDMFSEM----------------------EASD--------TATPNEITFTGVL 507
Query: 384 NVCAGLSEIKMGKEVHGFI-HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
+ C + G+ + HR NI ++D+ + G ++ A M D
Sbjct: 508 SACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPD 567
Query: 443 KVSWNAVLTGYARRGQSE 460
+W A+L + G+ E
Sbjct: 568 VPAWGALLGACWKHGEYE 585
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 132/299 (44%), Gaps = 14/299 (4%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K G++ DA LF MP +D SW+ ++ QN L +F +M G+
Sbjct: 336 NSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIR 395
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+++T +V+ + L K +H I + + +++L +SL++ Y KC + A
Sbjct: 396 PDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEA 455
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSS 259
F+ ++ K WN ++ + G +++ MF +M D P TF L AC
Sbjct: 456 FNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGL 515
Query: 260 PYEGMQIHGVII-KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIV 317
EG ++ + + G + ++ + G +++A ++ P ++ +W +++
Sbjct: 516 VDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALL 575
Query: 318 SG------YAISGRIREARELFNEMPERNVISWNAMLAG-YTRSLLWKEALDFVFLMRK 369
Y + R+ R+L N P + + ML+ Y + +W+ D M++
Sbjct: 576 GACWKHGEYEVGERV--GRKLVNRDPLHD--GFQTMLSNIYAKEGMWQSVDDLRGSMKQ 630
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 255/526 (48%), Gaps = 64/526 (12%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F I WN+++R + V+ EA+ M+ M R+ + N T+ AC+
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ G IH ++K+ FE V +L MY CG L GL
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHL----GL--------------- 130
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
A+++F+EMPER+++SWN+++ GY + ++E L MR D
Sbjct: 131 ------------AQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDA 178
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR-------------- 422
VT+ ++ C L E + + +I N+ ++++ N L+DMY
Sbjct: 179 VTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQ 238
Query: 423 -----------------KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
K GNL +AR F MSQR D +SW ++T Y++ GQ EA+
Sbjct: 239 MQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQR-DVISWTNMITSYSQAGQFTEALRL 297
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
F EM + + +P + T ++L+ACA+ SL+ G+ H ++ + + ++ AL+++Y K
Sbjct: 298 FKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCK 357
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C +E A+ VFKE D + S+I G N AL+ F M +E ++P H F GI
Sbjct: 358 CGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGI 417
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
LLAC H G V L++F+SM YG+ P+++HY C++ L R G ++ +F+ MP P
Sbjct: 418 LLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTP 477
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
V + R + + +G L E A ++L EL+P + +++N +
Sbjct: 478 DVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTY 523
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 239/454 (52%), Gaps = 6/454 (1%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A LF ++ WN M+ ++ + P + ++ M G+ N +TY + ++ A
Sbjct: 30 AHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACAR 89
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
++ +H ++K GF ++ + ++L++ YG C + A+++FD++ ++ VSWN +
Sbjct: 90 VPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSL 149
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V Y +E + +F M ++ T + AC+ L + I + +
Sbjct: 150 VCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNV 209
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E D + +L +MY + G + ARG+ DQ RN++SW +++ GY +G + ARELF+
Sbjct: 210 EIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDA 269
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M +R+VISW M+ Y+++ + EAL M ++ D++T+ +L+ CA + +G
Sbjct: 270 MSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVG 329
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+ H +I + D ++I+V NAL+DMY KCG + A F +M +++D VSW ++++G A
Sbjct: 330 EAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEM-RKKDSVSWTSIISGLAV 388
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G ++ A+ FS M E +PS F +L ACA+ +++G + + + Y +
Sbjct: 389 NGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLE-YFESMEKVYGLKPEM 447
Query: 515 R--GALVEVYTKCCCLEYAIRVFKE-SSSLDVII 545
+ G +V++ ++ L+ A KE + DV+I
Sbjct: 448 KHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVI 481
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 209/462 (45%), Gaps = 51/462 (11%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y LF+ CA + + + ++ +++ N I YG CG+L A+ +FDEMP
Sbjct: 80 YLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMP 139
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SWN+++ Y Q L +F M +GV + +T V+ + E GV+
Sbjct: 140 ERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADA 199
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+ I + +V L ++L+D YG+ ++ AR +FD +Q +N VSWN ++ Y AGN
Sbjct: 200 MVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGN 259
Query: 225 -----------------------------GK--EAVVMFFKMLREDIRPLNFTFANALFA 253
G+ EA+ +F +M+ ++P T A+ L A
Sbjct: 260 LVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSA 319
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ S G H I K D + D V +L +MY KCG +E A + + +++ +SW
Sbjct: 320 CAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSW 379
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG----------YTRSLLWKEALDF 363
TSI+SG A++G A + F+ M V + G + L + E+++
Sbjct: 380 TSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEK 439
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
V+ ++ K G ++++ + ++ E FI + ++ + LL +
Sbjct: 440 VYGLKPEMKH-----YGCVVDLLSRSGNLQRAFE---FIKEMPVTPDVVIWRILLSASQV 491
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQSEEAM 463
GN+ A I ++ + S N VL+ YA + E+A+
Sbjct: 492 HGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAV 533
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 147/295 (49%), Gaps = 5/295 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YGK GNL AR LFD M +RD SW M+ +Y+Q G L LF +M S V
Sbjct: 248 NAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVK 307
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
++IT A+VL + A L V + H I K ++ + ++L+D Y KC V+ A +
Sbjct: 308 PDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEV 367
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F +++ K++VSW I+ V G A+ F +MLRE ++P + F L AC+
Sbjct: 368 FKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLV 427
Query: 261 YEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVS 318
+G++ + K+ + + G + ++ + G L+ A + + P +++ W ++S
Sbjct: 428 DKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLS 487
Query: 319 GYAISGRIREARELFNEMPERNVI-SWNAMLAG--YTRSLLWKEALDFVFLMRKT 370
+ G I A ++ E + S N +L+ Y S W++A+ LM K+
Sbjct: 488 ASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKS 542
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 36/356 (10%)
Query: 315 SIVSGYAIS-GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
+++ YA+S I +A LF ++ + WN M+ G++ S EA+ LM +
Sbjct: 15 NLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLL 74
Query: 374 IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW 433
+ +T + CA + ++ G +H + + + S+++VSNAL++MY CG+L A+
Sbjct: 75 GNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKV 134
Query: 434 FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISS 492
F +M + RD VSWN+++ GY + + E + F M+ + T ++ AC ++
Sbjct: 135 FDEMPE-RDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGE 193
Query: 493 LEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
+ ++ N EI+V L+++Y + + A VF + +++ N+MI+G
Sbjct: 194 WGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMG 253
Query: 553 F-----------------------------CHNERGR--EALEVFGLMKKEGIKPDHITF 581
+ +++ G+ EAL +F M + +KPD IT
Sbjct: 254 YGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITV 313
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM-KELEDF 636
+L AC H G++ + D ++ KY + + +I +YC+ G + K LE F
Sbjct: 314 ASVLSACAHTGSLDVGEAAHDYIQ-KYDVKADIYVGNALIDMYCKCGVVEKALEVF 368
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 273/557 (49%), Gaps = 47/557 (8%)
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ +SLV A+ + DA FD + ++ V N ++ + A AV +F +L
Sbjct: 95 VAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 154
Query: 237 RE-DIRPLNFTFA---NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+RP +++F +A+ L++P+ Q+H ++K V +L +Y+KC
Sbjct: 155 GSGSLRPDDYSFTALISAVGQMHNLAAPH-CTQLHCSVLKSGAAAVLSVSNALIALYMKC 213
Query: 293 GRLE---DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
E DAR +LD+ +++ ++WT++V GY G + AR +F E+ + + WNAM++
Sbjct: 214 DTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMIS 273
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS- 408
GY +S + +A + M +D+ T +L+ CA GK VHG I R +
Sbjct: 274 GYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNF 333
Query: 409 ---SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY------------ 453
+ + V+NAL+ +Y K G + A+ F M+ + D VSWN +L+GY
Sbjct: 334 VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTILSGYIDSGCLDKAVEV 392
Query: 454 -------------------ARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSL 493
G SE+A+ F++M+ E +P +T+ +AAC + +L
Sbjct: 393 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL 452
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
+ G+Q+H +++ +E + AL+ +Y KC + A VF +LD + N+MI
Sbjct: 453 KHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISAL 512
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ GREALE+F M EGI PD I+F IL AC H G V +F+SM+ +GI P
Sbjct: 513 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPG 572
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY +I L R G + E D + MPF PT + I CR NG G +AA +L
Sbjct: 573 EDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLF 632
Query: 674 ELNPWAPFQFKITTNRF 690
+ P + + +N +
Sbjct: 633 RMIPQHDGTYILLSNTY 649
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 244/545 (44%), Gaps = 51/545 (9%)
Query: 1 MAGNAATILKNILSKSSPKPT-PSKTLTKTI---SGHLKSDEPVSYSLYAHLFQLCASSK 56
+A + +L+ + + SP PT PS + + + L + + + + HL
Sbjct: 14 LAHQCSLLLRRLAERHSPAPTCPSSSFLRALRCLHARLLTADLLHAPSHPHLTLRLIHLY 73
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP--ERDGGSWNAM 114
+ + L P P + + G L DA FD +P RD NAM
Sbjct: 74 TLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAM 133
Query: 115 LGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSK--QLHGLIVK 171
+ A+ + + +F + SG + + ++ ++ + + L QLH ++K
Sbjct: 134 MSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLK 193
Query: 172 RGFCGNVILESSLVDAYGKC--------------------------MV--------MTDA 197
G + + ++L+ Y KC MV + A
Sbjct: 194 SGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAA 253
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R +F+++ K V WN ++ Y+ +G +A +F +M+ E + FTF + L AC+
Sbjct: 254 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 313
Query: 258 SSPYEGMQIHGVIIKID----FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
G +HG II++ E V +L +Y K G++ A+ + D + ++++SW
Sbjct: 314 GFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSW 373
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR-KTTK 372
+I+SGY SG + +A E+F MP +N +SW M++GY L ++AL MR + K
Sbjct: 374 NTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 433
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D G I C L +K G+++H + + + ++ NALL MY KCG + AR+
Sbjct: 434 PCDYTYAGAI-AACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL 492
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANIS 491
F M D VSWNA+++ + G EA+ F +M E P + +F T+L AC +
Sbjct: 493 VFLVMPN-LDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAG 551
Query: 492 SLEQG 496
+++G
Sbjct: 552 LVDEG 556
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 192/464 (41%), Gaps = 86/464 (18%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
VS +L A L+ C + +A +ARK+ + P + Y + G+++ AR +
Sbjct: 202 VSNALIA-LYMKCDTPEASWDARKVLDEM----PDKDDLTWTTMVVGYVRRGDVNAARSV 256
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
F+E+ + WNAM+ Y Q+G ELF M V ++ T+ +VL + A
Sbjct: 257 FEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFF 316
Query: 160 GVSKQLHGLIVK--RGFCGNVILE--SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN-- 213
K +HG I++ F L ++LV Y K + A+R+FD + K+ VSWN
Sbjct: 317 VHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTI 376
Query: 214 -----------------------------VIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
V+V Y+ G ++A+ +F +M ED++P +
Sbjct: 377 LSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCD 436
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+T+A A+ AC L + G Q+H +++ FE + +L MY KCG + DAR +
Sbjct: 437 YTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLV 496
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+ +SW +++S G REA ELF++M +
Sbjct: 497 MPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGI----------------------- 533
Query: 365 FLMRKTTKDIDQVTLGLILNVC--AGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------ 416
D D+++ IL C AGL + GF + + +S
Sbjct: 534 --------DPDRISFLTILTACNHAGLVD-------EGFHYFESMKRDFGISPGEDHYAR 578
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
L+D+ + G + AR M W A+L+G G E
Sbjct: 579 LIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 151/330 (45%), Gaps = 22/330 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + Y G LD A +F MP ++ SW M+ Y G L+LF M V
Sbjct: 374 NTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 433
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
TYA + + E L +QLH +V+ GF + ++L+ Y KC + DAR +
Sbjct: 434 PCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLV 493
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F + N ++VSWN ++ G+G+EA+ +F +M+ E I P +F L AC+
Sbjct: 494 FLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLV 553
Query: 261 YEGMQIHGVIIKIDF---EGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSI 316
EG + +K DF G+D L ++ + GR+ +AR L+ P E W +I
Sbjct: 554 DEGFH-YFESMKRDFGISPGED-HYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAI 611
Query: 317 VSGYAISGRIR----EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
+SG +G + A +LF +P+ + ++ + Y+ + W +A LMR
Sbjct: 612 LSGCRTNGDMEFGAYAADQLFRMIPQHDG-TYILLSNTYSAAGRWVDAARVRKLMRDRGV 670
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
+ G S I++G ++H F+
Sbjct: 671 KKEP-----------GCSWIEVGSKIHVFL 689
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 164/391 (41%), Gaps = 76/391 (19%)
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP--ERNVI 342
L +Y L L + ++ TS+V+ +A +GR+R+A F+ +P R+ +
Sbjct: 69 LIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTV 128
Query: 343 SWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK--EVH 399
NAM++ + R+ L A+ F L+ + D + +++ + + ++H
Sbjct: 129 LHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLH 188
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKC----------------------------------G 425
+ ++ ++ + VSNAL+ +Y KC G
Sbjct: 189 CSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRG 248
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP-SKFTFETLL 484
++ +AR F ++ + D V WNA+++GY + G +A F M E P +FTF ++L
Sbjct: 249 DVNAARSVFEEVDGKFD-VVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVL 307
Query: 485 AACANISSLEQGKQIHCFVIR----NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+ACAN GK +H +IR E + ALV +Y+K + A R+F +
Sbjct: 308 SACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNL 367
Query: 541 LDVIICNS-------------------------------MILGFCHNERGREALEVFGLM 569
DV+ N+ M+ G+ H +AL++F M
Sbjct: 368 KDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQM 427
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ E +KP T+ G + AC G +K Q
Sbjct: 428 RAEDVKPCDYTYAGAIAACGELGALKHGRQL 458
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 290/583 (49%), Gaps = 37/583 (6%)
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG-LIVKR 172
ML A + P R L N S+ + +L+ SA+ L V K +H LIV
Sbjct: 1 MLKAQRKAYVPFRHAPFLLRPNAVSPSS-PLDLIKLLKLSADTKNLKVGKTIHSHLIVTS 59
Query: 173 GFCGNVILE-SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
N I+E +SL++ Y K ++ A +FD + +N VSW+ ++ YL+ G + + +
Sbjct: 60 RATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRL 119
Query: 232 FFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYV 290
M+ E ++ P + A A+ +C EG Q HG+++K F + V +L MY
Sbjct: 120 LKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYS 179
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
KC ++DA G+ +NE+P +++++N++L+
Sbjct: 180 KCSIVQDAMGV-------------------------------WNEVPVNDIVAYNSILSS 208
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN 410
+ +E L+ + M + D+VT ++CA L ++++G VHG + +D +
Sbjct: 209 LVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECD 268
Query: 411 IFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ 470
+VS+A+++MY KCG AR F + Q R+ V W AV+ + G EEA+ FS+M+
Sbjct: 269 AYVSSAIINMYGKCGKSLMARGVFDGL-QSRNVVLWTAVMASCFQNGCFEEALNLFSKME 327
Query: 471 WE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLE 529
E + ++FT+ LL ACA +S+ G +H ++ ++ +V+ AL+ +Y K +E
Sbjct: 328 QENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIE 387
Query: 530 YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACI 589
A +VF + D+I N+MI GF H+ G++AL VF M P+++TF G+L AC
Sbjct: 388 AAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACG 447
Query: 590 HEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML 649
H G V+ + + ++G+ P LEHY C++ L + G + E +F+ P V
Sbjct: 448 HLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAW 507
Query: 650 RKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
R + + C + LG W A + E++P + + +N + +
Sbjct: 508 RTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAK 550
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 231/453 (50%), Gaps = 36/453 (7%)
Query: 48 LFQLCASSKAIVEARKLESNL-VTFYPTP-PVFLLNRAIECYGKCGNLDDARGLFDEMPE 105
L +L A +K + + + S+L VT T + +N I Y K + A LFD MPE
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94
Query: 106 RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-VSANQITYANVLRSSAEELELGVSKQ 164
R+ SW+A++ Y NGF + + L DM G VS N+ A + S + + +Q
Sbjct: 95 RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
HGL++K GF + + ++LV Y KC ++ DA +++++ + V++N I+ + G
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
+E + + M+ E ++ TF NA C+ L G+ +HG ++ D E D V +
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
+ MY KCG+ ARG+ D RN++ WT++++ +G EA LF++M + NV S
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKS- 333
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
++ T ++LN CAGLS + G +HG +
Sbjct: 334 ------------------------------NEFTYAVLLNACAGLSARRNGSLLHGHSEK 363
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ + ++ V NAL++MY K G++ +A+ F M RD ++WNA++ G++ G ++A+
Sbjct: 364 SGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM-MHRDIITWNAMICGFSHHGLGKKALL 422
Query: 465 SFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
F +M E P+ TF +L+AC ++ +++G
Sbjct: 423 VFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEG 455
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 176/390 (45%), Gaps = 20/390 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ + F LCAS K + + ++T ++ + I YGKCG ARG+FD +
Sbjct: 237 FVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQ 296
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ W A++ + QNG L LF M V +N+ TYA +L + A
Sbjct: 297 SRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSL 356
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LHG K GF +V++ ++L++ Y K + A+++F D+ +++ ++WN ++ + G
Sbjct: 357 LHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGL 416
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLG 283
GK+A+++F ML + P TF L AC L EG +H ++ + +
Sbjct: 417 GKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYT 476
Query: 284 SLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAIS---GRIREARELFNEMPER 339
+ + K G+L +AR + P + ++++W ++++ + G R E EM
Sbjct: 477 CIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPN 536
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V ++ + Y + W D V +RK +D + G+S I++G H
Sbjct: 537 DVGTYTLLSNIYAKEKRW----DGVVKVRKLMRDKK-------IKKEPGVSWIEIGNVTH 585
Query: 400 GFIHRN----DYSSNIFVSNALLDMYRKCG 425
F + DY LL M + G
Sbjct: 586 IFTSEDNKHPDYGQTYQKVKELLAMIKPLG 615
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/654 (27%), Positives = 309/654 (47%), Gaps = 52/654 (7%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKC---------- 90
SY+ ++ + CA ++++ + L +++ + + N + Y C
Sbjct: 104 SYT-FSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTA 162
Query: 91 ---GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
N D R +FD M +R+ +WN M+ Y + ++F M G+ +++
Sbjct: 163 YDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFV 222
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRG--FCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
NV + + + L+GL+VK G + + + SS + Y + + AR +FD
Sbjct: 223 NVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCL 282
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGM 264
+N WN ++ Y+ EA+ +F +++ + L+ TF +AL A S L G
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGR 342
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+H I+K V+L ++ MY +CG
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGS------------------------------ 372
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
I + ++F+ M ER+V++WN M++ + ++ L E L VF M+K +D VTL +L+
Sbjct: 373 -IGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLS 431
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ-RRDK 443
+ + L ++GK+ H ++ R+ + L+DMY K G + +A+ F + S RD+
Sbjct: 432 LASNLRSQEIGKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDE 490
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCF 502
+WNA++ GY + G SEE F +M + RP+ T ++L AC + ++ GKQIH F
Sbjct: 491 ATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGF 550
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
IR NV AL+++Y+K + YA VF E+ + + +MIL + + G A
Sbjct: 551 AIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERA 610
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L +F M GIKPD +TF IL AC + G V L+ F SM +Y I P EHY C+
Sbjct: 611 LSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVAD 670
Query: 623 LYCRYGYMKELEDFVNRM-PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ R G + E +FV + T + + CR +G LG+ A +L E+
Sbjct: 671 MLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEM 724
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 252/535 (47%), Gaps = 50/535 (9%)
Query: 91 GNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANV 149
G+ A LFD +P WN ++ + N P L + M S + T+++
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD------------- 196
L++ A+ L + K LH +++ F + I+ +SL++ Y C+
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
RR+FD ++ +N V+WN ++ Y+ EA MF M+R IRP +F N A
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
++ ++G+++K LGS D D+ ++S S
Sbjct: 231 MNDYDNANVLYGLVVK---------LGS------------------DYVDDFFVVS--SA 261
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDID 375
+ YA G + ARE+F+ ERN WN M+ GY ++ EA+D FV +M +D
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLD 321
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
VT L + L + +G+++H +I ++ + + NA++ MY +CG++ ++ F
Sbjct: 322 DVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLE 494
M + RD V+WN +++ + + G +E + EMQ + T LL+ +N+ S E
Sbjct: 382 NMLE-RDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQE 440
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL--DVIICNSMILG 552
GKQ H ++IR+ + + G L+++Y K + A ++F+++S D N+MI G
Sbjct: 441 IGKQAHAYLIRHGIQFEGM-DGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAG 499
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD-SMRC 606
+ N E VF M ++ ++P+ +T IL AC G + L Q ++RC
Sbjct: 500 YTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRC 554
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 38/372 (10%)
Query: 84 IECYGKCGNLDDARGLFDEMP--ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I+ Y K G + A+ LF++ +RD +WNAM+ YTQNG +F M V
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
N +T A++L + +G+ KQ+HG ++ NV + ++L+D Y K +T A +F
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVF 583
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
+ KN+V++ ++ Y G G+ A+ +F ML I+P + TF L ACS+
Sbjct: 584 AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643
Query: 262 EGMQIHGVI---IKIDFEGDDVVLGSLTEMYVKCGRLEDA----RGLLDQPDERNIISWT 314
EG++I + KI + + +M + GR+ +A +GL ++ + I W
Sbjct: 644 EGLRIFQSMEREYKIQPSSEHYC--CVADMLGRVGRVXEAYEFVKGLGEEGNTFRI--WG 699
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ I G + + N++ E + + L GY L ++ ++
Sbjct: 700 SLLGACRIHGEFELGKVVANKLLE---MEKGSXLTGY------HVLLSNIYAAEGNWDNV 750
Query: 375 DQV-----TLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDM------ 420
D+V GL+ AG S +++ V+ F+ H++ + I+ L M
Sbjct: 751 DRVRKEMRQKGLMKE--AGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAG 808
Query: 421 YRKCGNLRSARI 432
Y+ C NL++ I
Sbjct: 809 YKPCLNLQTGGI 820
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 20/323 (6%)
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT-TKDIDQVTLGLI 382
G +A LF+ +P + WN ++ G+ + + +AL F MR + + D T
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC-------------GNLRS 429
L CA +K+GK +H + R+ + S+ V N+LL+MY C N
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF-SEMQWETRPSKFTFETLLAACA 488
R F M ++R+ V+WN +++ Y + + EA F + M+ RP+ +F + A
Sbjct: 171 VRRVFDTM-RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 489 NISSLEQGKQIHCFVIR--NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
++ + ++ V++ + Y + + + +Y + C+++A +F + +
Sbjct: 230 RMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 547 NSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR 605
N+MI G+ N EA+++F +M+ E D +TF L A + L Q +
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYI- 348
Query: 606 CKYGIIPQLEHYECMIKLYCRYG 628
K I Q+ +I +Y R G
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCG 371
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 166/580 (28%), Positives = 296/580 (51%), Gaps = 41/580 (7%)
Query: 26 LTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE 85
+ KTI LKS P +L+ HL C+S K + + + + ++ V L + +
Sbjct: 26 INKTIWHQLKS--PTHQTLH-HLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGKLLS 79
Query: 86 CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQIT 145
+ G+L A LFD++P+ + +N ++ Y+ + P ++L LF M +G NQ T
Sbjct: 80 LCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFT 139
Query: 146 YANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+ VL++ A + + +H +K G + ++++++ AY C ++ AR++FDDI
Sbjct: 140 FPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDIS 199
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
++ VSWN ++ Y G EA+++F +ML+ + FT + L A S + G
Sbjct: 200 DRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRF 259
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+H I+ E D +V +L +MY KCG L+ A+ + DQ +++++SWTS+V+ YA G
Sbjct: 260 VHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGL 319
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+ A ++FN MP +NV+SWN+++ + + EA++ M + D TL IL+
Sbjct: 320 VENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSC 379
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C+ ++ +GK+ H +I N + ++ + N+L+DMY KCG L++A F+ M + ++ VS
Sbjct: 380 CSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPE-KNVVS 438
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN ++ A G EEA+ F MQ P + TF LL+AC++ ++ G+
Sbjct: 439 WNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGR------- 491
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
Y +++ I F+ S ++ C +LG RG E
Sbjct: 492 ---YYFDIM------------------ISTFRISPGVEHYACMVDLLG-----RGGFLGE 525
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSM 604
L++K +KPD + + +L AC GN+++A Q +
Sbjct: 526 AMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQL 565
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 256/560 (45%), Gaps = 64/560 (11%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +H I+ G V+ L+ + + A +FD I N +N ++R Y +
Sbjct: 56 KLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNS 115
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+ +++++F +M+ P FTF L AC+ +E + +H IK+ V
Sbjct: 116 NDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQ 175
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
++ YV C RL I AR++F+++ +R ++
Sbjct: 176 NAILTAYVAC-RL------------------------------ILSARQVFDDISDRTIV 204
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWN+M+AGY++ EA+ M + + D TL +L+ + + +G+ VH +I
Sbjct: 205 SWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYI 264
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ V+NAL+DMY KCG+L+ A+ F QM + D VSW +++ YA +G E A
Sbjct: 265 VITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDK-DVVSWTSMVNAYANQGLVENA 323
Query: 463 MTSFSEM------QWET--------------------------RPSKFTFETLLAACANI 490
+ F+ M W + P T ++L+ C+N
Sbjct: 324 VQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNT 383
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
L GKQ HC++ N ++V +L+++Y KC L+ AI +F +V+ N +I
Sbjct: 384 GDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVII 443
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGI 610
+ G EA+E+F M+ G+ PD ITF G+L AC H G V + +FD M + I
Sbjct: 444 GALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRI 503
Query: 611 IPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAAR 670
P +EHY CM+ L R G++ E + +MP P V + + CR G + + +
Sbjct: 504 SPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMK 563
Query: 671 RLNELNPWAPFQFKITTNRF 690
+L EL + + + +N +
Sbjct: 564 QLLELGRFNSGLYVLLSNMY 583
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 193/492 (39%), Gaps = 80/492 (16%)
Query: 20 PTPSKTL-TKTISGHLKSDEPVSYSL----------------YAHLFQLCASSKAIVEAR 62
P P+K + I G+ S++P+ L + + + CA+ EA
Sbjct: 98 PQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAV 157
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+ + + P + N + Y C + AR +FD++ +R SWN+M+ Y++ G
Sbjct: 158 IVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMG 217
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
F + LF +M GV A+ T ++L +S++ L + + +H IV G + I+ +
Sbjct: 218 FCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTN 277
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY----------------------- 219
+L+D Y KC + A+ +FD + +K+ VSW +V Y
Sbjct: 278 ALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVS 337
Query: 220 --------LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
+ G EAV +F +M + P + T + L CS G Q H I
Sbjct: 338 WNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYIC 397
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ SL +MY KCG L+ A + E+N++SW I+ A+ G EA E
Sbjct: 398 DNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIE 457
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+F M + D++T +L+ C+
Sbjct: 458 MFKSMQASGLYP-------------------------------DEITFTGLLSACSHSGL 486
Query: 392 IKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
+ MG+ I S + ++D+ + G L A +M + D V W A+L
Sbjct: 487 VDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALL 546
Query: 451 TGYARRGQSEEA 462
G E A
Sbjct: 547 GACRIYGNLEIA 558
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 41/295 (13%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY---------------------- 118
N I+ Y KCG+L A+ +FD+M ++D SW +M+ AY
Sbjct: 277 NALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVV 336
Query: 119 ---------TQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
Q G +ELF M SGV + T ++L + +L + KQ H I
Sbjct: 337 SWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYI 396
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
+V L +SL+D Y KC + A +F + KN VSWNVI+ + G G+EA+
Sbjct: 397 CDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAI 456
Query: 230 VMFFKMLREDIRPLNFTFANALFACSF-----LSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
MF M + P TF L ACS + Y + I I E
Sbjct: 457 EMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEH----YAC 512
Query: 285 LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ ++ + G L +A L+ + P + +++ W +++ I G + A+++ ++ E
Sbjct: 513 MVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLE 567
>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
Length = 688
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 294/617 (47%), Gaps = 62/617 (10%)
Query: 75 PPVFLLNR--AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG-FPGRTLELF 131
PP+ +L+ ++ + L DA LFD MP RD ++ +L + G FPG + LF
Sbjct: 21 PPLSMLDHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPG-AMALF 79
Query: 132 LDMNHSG---VSANQITYANVLRSSAEELE---LGVSKQLHGLIVKRGFCGNVILESSLV 185
+ S A+ + V +S A + L + LH
Sbjct: 80 SRLRASSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAA--------------- 124
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
C+ + A ++FD++ +KN VSW +V AG EA+ F +M + ++
Sbjct: 125 ----GCLGL--ALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSY 178
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
+A AL AC+ G ++H K+ + V +L +Y +C ++ A + +
Sbjct: 179 AYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRM 238
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
R++ +WT+++S Y +GR +EA E F M L +E+
Sbjct: 239 GTRDVAAWTTVISAYVQTGRAKEAIEAFVRM-------------------LREES----- 274
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
++ T ++ CA ++ + +G+++H R ++ V+N+L+ +Y +
Sbjct: 275 ---SVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAA 331
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET---RPSKFTFET 482
SA ++ S +D VSW+A+++GYA+ G +E+A F EM+ + RP++FT +
Sbjct: 332 GCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLAS 391
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LL+ CA +SL+ G+Q+H + E + + R AL+++Y K + A VF D
Sbjct: 392 LLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDD 451
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
V+ +MI+G+ + ++ALE+F M G+KPDH+TF G+L AC H G V+L L++ +
Sbjct: 452 VVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLN 511
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPML-RKIFDKCRKNGY 661
M YG+ P EHY C++ L R G + E E+ + ++ N ++ + C G
Sbjct: 512 EMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGE 571
Query: 662 ATLGEWAARRLNELNPW 678
G+ AA R E PW
Sbjct: 572 EETGKKAAERAMEAEPW 588
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 183/419 (43%), Gaps = 59/419 (14%)
Query: 74 TPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLD 133
TP ++ N Y +C ++D A M RD +W ++ AY Q G +E F+
Sbjct: 211 TP--YVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVR 268
Query: 134 M--NHSGVSA--NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
M S V+A N+ TYA V+ + A+ + + +QLH ++GF + +SLV Y
Sbjct: 269 MLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYT 328
Query: 190 K---CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLN 244
+ C+ DA +F + K+ VSW+ I+ Y G ++A +F +M RP
Sbjct: 329 RAAGCLSAADA--VFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNE 386
Query: 245 FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FT A+ L C+ +S G Q+H + + E ++ +L +MY K G + DA +
Sbjct: 387 FTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSH 446
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+ +++SWT+++ GYA G ++A ELF EM +
Sbjct: 447 RVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGL----------------------- 483
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMG-------KEVHGFIHRNDYSSNIFVSNAL 417
D VT +LN C E+++G +++G ++ +
Sbjct: 484 --------KPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCV------ 529
Query: 418 LDMYRKCGNLRSARIWFYQM-SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRP 475
+D+ + G + A ++ + RD V W ++L A RG+ EE +E E P
Sbjct: 530 VDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGE-EETGKKAAERAMEAEP 587
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 45/359 (12%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A+ K AR + ++LVT Y RA C L A +F E +D SW+
Sbjct: 308 AARKGFACARSVANSLVTLY--------TRAAGC------LSAADAVFRESVVKDVVSWS 353
Query: 113 AMLGAYTQNGFPGRTLELFLDM-NHSGVS-ANQITYANVLRSSAEELELGVSKQLHGLIV 170
A++ Y Q G LF +M +HSG N+ T A++L A L +QLH L V
Sbjct: 354 AIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAV 413
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
G + ++ S+L+D YGK M DA +F + VSW ++ Y G+ K+A+
Sbjct: 414 AAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALE 473
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-------QIHGVIIKIDFEGDDVVLG 283
+F +M ++P + TF L AC G+ QI+G+ + G
Sbjct: 474 LFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEH------YG 527
Query: 284 SLTEMYVKCGRLEDARGLLDQ--PDERNIISWTSIVSGYAISGRI---REARELFNEMPE 338
+ ++ + GR+ +A L+ + +ER+ + WTS++ A G ++A E E
Sbjct: 528 CVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEP 587
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+ AM Y W EA +M++ G++ AG S I +G E
Sbjct: 588 WGAGAHVAMANLYASKGQWHEAAQERHMMKQK---------GVVKG--AGWSSITVGGE 635
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 143/357 (40%), Gaps = 28/357 (7%)
Query: 291 KCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
+ GR R + P +++ + + A S R+ +A LF+ MP R+ +++ +LAG
Sbjct: 6 RLGRSVWTRAVRPDPPPLSMLDHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAG 65
Query: 351 YTRSLLWKEALDFVFLMRKTTKDI---DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ + + A+ +R ++ + D L L+ CA ++ +
Sbjct: 66 HAAAGDFPGAMALFSRLRASSPPLAPADPFVLSLVFKSCAAAADAR-------------- 111
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
F+ +A G L A F +M ++ VSW ++ R G+ EA+ FS
Sbjct: 112 ----FLPHAASLHAFAAGCLGLALKVFDEMPH-KNVVSWTTLVASLTRAGRRHEALRRFS 166
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EM+ + + L ACA+ L +G+++H F + + L +Y +C
Sbjct: 167 EMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCS 226
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKE----GIKPDHITFH 582
++ A+ + DV ++I + R +EA+E F M +E P+ T+
Sbjct: 227 DVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYA 286
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
++ AC V L Q + + G ++ LY R D V R
Sbjct: 287 AVIAACADIAWVCLGEQLH-AQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFR 342
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 25 TLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAI 84
L + + H P ++L A L +CA++ ++ R+L + V + + I
Sbjct: 370 ALFREMRHHSGCPRPNEFTL-ASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALI 428
Query: 85 ECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQI 144
+ YGK G++ DA +F + D SW AM+ Y ++G + LELF +M H G+ + +
Sbjct: 429 DMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHV 488
Query: 145 TYANVLRS--SAEELELGVS-----KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
T+ VL + A E+ELG+ Q++GL + G V VD G+ + +A
Sbjct: 489 TFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCV------VDLLGRAGRINEA 542
Query: 198 RRMFDDI--QNKNAVSWNVIVRRYLVAGNGKE 227
+ I ++ V W ++R A G+E
Sbjct: 543 EELIGKIAANERDGVVWTSLLR--ACAARGEE 572
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 240/483 (49%), Gaps = 33/483 (6%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
++ +F ++ N WN ++R + +A+ ++ M P NFT L AC+
Sbjct: 67 SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G++IH +++K ++ D V SL +YVKC +DA
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDAL----------------- 169
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++F+++P++NV+SW A++ GY S ++EA+ + + D
Sbjct: 170 --------------KVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDS 215
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L +L CA L + G+ + +I + N+FV+ +LLDMY KCGNL A + F
Sbjct: 216 FSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSA 275
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
M ++ D VSW+ ++ GYA G ++A+ F +MQ E +P +T +L+ACA + +L+
Sbjct: 276 MPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
G + RN + N V AL+++Y+KC + A +F D ++ N+M++G
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSM 394
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
N + +F L++K GI+PD TF G+L C H G V QFF++M+ + + P +E
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIE 454
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R G + E +N MP P + + C+ + L E ++L EL
Sbjct: 455 HYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIEL 514
Query: 676 NPW 678
PW
Sbjct: 515 EPW 517
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 218/440 (49%), Gaps = 33/440 (7%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ + + + L+ + +LLN + C G+ + ++ +F ++ E + WN M+
Sbjct: 31 QLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
+ L+ M G N T VL++ A +L++ + ++H L+VK G+ +V
Sbjct: 91 SKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVF 150
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+++SL+ Y KC DA ++FDDI +KN VSW I+ Y+ +G+ +EA+ F K+L
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
++P +F+ L AC+ L G I I + V SL +MYVKCG LE A
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
+ E++I+SW++++ GYA FN +P+ +
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYA-----------FNGLPQ--------------------Q 299
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
ALD F M+ D T+ +L+ CA L + +G + RN++ SN + AL+D
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
MY KCG++ A F M +R+D+V WNA++ G + G ++ + FS ++ RP +
Sbjct: 360 MYSKCGSVTQAWEIFTAM-KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418
Query: 479 TFETLLAACANISSLEQGKQ 498
TF LL C + + +G+Q
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQ 438
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 175/406 (43%), Gaps = 32/406 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ + CA + K+ S LV VF+ + Y KC N DDA +FD++P+++
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
SW A++ Y +G + F + G+ + + VL + A + + +
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I G NV + +SL+D Y KC + A +F + K+ VSW+ +++ Y G ++
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
A+ +FF+M E+++P +T L AC+ L + G+ ++ + +F + V+ +L +
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG + A W E+F M ++ + WNAM
Sbjct: 360 MYSKCGSVTQA--------------W-----------------EIFTAMKRKDRVVWNAM 388
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-D 406
+ G + + K L+ K D+ T +L C + G++ + R
Sbjct: 389 MVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFS 448
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ +I ++D+ + G L A M + + V W A+L G
Sbjct: 449 LTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 57/249 (22%)
Query: 473 TRPSKFTFETLLAACANISS----LEQGKQIHCFVIR-----NCYEINVVCRGALVEVYT 523
T P+ F L +S+ Q K IH ++R + Y +N++
Sbjct: 5 TSPTSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLIL--------- 55
Query: 524 KCCCLE-----YAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
CC L+ Y+ VF + ++ + N+MI G + +A+ ++G M+ G P++
Sbjct: 56 -CCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNN 114
Query: 579 ITFHGILLACIHEGNVKLALQF----------------------------FDSMRCKYGI 610
T +L AC + +V+L L+ FD +
Sbjct: 115 FTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDD 174
Query: 611 IPQ--LEHYECMIKLYCRYGYMKELEDFVNR---MPFNPTVPMLRKIFDKCRKNGYATLG 665
IP + + +I Y G+ +E + M P L K+ C + G T G
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 666 EWAARRLNE 674
EW R +++
Sbjct: 235 EWIDRYISD 243
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 170/604 (28%), Positives = 295/604 (48%), Gaps = 41/604 (6%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQN-GFPGRTLELFLDMNHSGV 139
N I Y +CG+L+ AR LFD+MPER+ S+NA+ AY++N + L M +
Sbjct: 49 NNLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESL 108
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
N T+ ++++ ++ + LH I+K G+ NV++++S++ Y C + ARR
Sbjct: 109 KPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 168
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+ + +AV+WN ++ ++ +++F ML + P FT++ L ACS L S
Sbjct: 169 IFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGS 228
Query: 260 PYE---GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
Y G IH +I D D V +L +MY CG +
Sbjct: 229 -YRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDM--------------------- 266
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDID 375
+EA +F ++ N++SWN++++G + + ++A L + L+R +T D
Sbjct: 267 ----------KEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPD 316
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T + A + GK +HG + + Y ++FV LL MY K G SA+ F
Sbjct: 317 EYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFG 376
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
+++R D V W ++ G +R G SE A+ F EM E R F+ ++L AC++++ L
Sbjct: 377 VITER-DVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLR 435
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFC 554
QG+ H I+ ++ + GALV++Y K E A +F S+ D+ NSM+ +
Sbjct: 436 QGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYS 495
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQL 614
+ +A F + + G PD +T+ +L AC H+G+ + ++ M+ + GI
Sbjct: 496 QHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMK-EQGITAGF 554
Query: 615 EHYECMIKLYCRYGYMKE-LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY CM+ L + G + E LE P N + R + C +G +AA ++
Sbjct: 555 KHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYAADQIL 614
Query: 674 ELNP 677
+L+P
Sbjct: 615 KLDP 618
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 18/314 (5%)
Query: 386 CAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
C ++ +K ++H I S + + +N L+ MY +CG+L AR F +M +R +
Sbjct: 17 CVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKMPER-N 75
Query: 443 KVSWNAVLTGYARR-GQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIH 500
VS+NA+ + Y+R + A + ++M E+ +P+ TF +L+ C + + G +H
Sbjct: 76 VVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLLH 135
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+I+ Y NVV + +++ +Y+ C LE A R+F+ + D + N+MI+G N++
Sbjct: 136 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIE 195
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL-QFFDSMRCKYGIIPQLEHYEC 619
+ L +F M G+ P T+ +L AC G+ + ++ + + I+ L
Sbjct: 196 DGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENA 255
Query: 620 MIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWA 679
++ +YC G MKE ++ NP + I C +NG+ RRL
Sbjct: 256 LLDMYCSCGDMKEAFYVFGKI-HNPNLVSWNSIISGCSENGFGEQAILMYRRL------- 307
Query: 680 PFQFKITTNRFDRY 693
+I+T R D Y
Sbjct: 308 ---LRISTPRPDEY 318
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
++ AR + S+++ P N ++ Y CG++ +A +F ++ + SWN+++
Sbjct: 236 LIHARMIVSDILADLPVE-----NALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISG 290
Query: 118 YTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
++NGF + + ++ + S ++ T++ + ++AE + K LHG + K G+
Sbjct: 291 CSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYER 350
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+V + ++L+ Y K A+++F I ++ V W ++ GN + AV +F +M
Sbjct: 351 SVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMY 410
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
RE R F+ ++ L ACS ++ +G H + IK F+ V G+L +MY K G+ E
Sbjct: 411 REKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYE 470
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAMLAG 350
A + ++ W S++ Y+ G + +A+ F ++ E + +++ ++LA
Sbjct: 471 TAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAA 528
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 3/288 (1%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
+ + P Y+ A + A + + + L + VF+ + Y K G
Sbjct: 310 ISTPRPDEYTFSAAI-PATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEA 368
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSS 153
+ A+ +F + ERD W M+ ++ G ++LF++M + + ++VL +
Sbjct: 369 ESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGAC 428
Query: 154 AEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
++ L + H L +K GF + + +LVD YGK A +F + N + WN
Sbjct: 429 SDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWN 488
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ Y G ++A F ++L P T+ + L ACS S EG + + +
Sbjct: 489 SMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQ 548
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIIS-WTSIVSG 319
+ + K G L +A L+ Q P E N W +++S
Sbjct: 549 GITAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSA 596
>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 175/679 (25%), Positives = 309/679 (45%), Gaps = 61/679 (8%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L A + C +A ++++++ + VF+ N I Y L DA +FDEM
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELELGVS 162
ER+ +W M+ YT +G P + +EL+ M + +AN+ Y+ VL++ ++ +
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
++ I K G+V+L +S+VD Y K + +A F +I ++ SWN ++ Y A
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 223 GNGKEAVVMFFKMLREDIRPLN------------------------------FTFANALF 252
G EAV +F +M + ++ N F L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 253 ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
ACSF G Q+H ++K E + +L +MY CG L A + Q
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK------ 300
Query: 313 WTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTK 372
++ S A+ WN+ML+G+ + + AL + + ++
Sbjct: 301 -LAVNSSVAV---------------------WNSMLSGFLINEENEAALWLLLQIYQSDL 338
Query: 373 DIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARI 432
D TL L +C +++G +VH + + Y + V + L+D++ GN++ A
Sbjct: 339 CFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHK 398
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANIS 491
F+++ + D ++++ ++ G + G + A F E+ + +F +L C++++
Sbjct: 399 LFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLA 457
Query: 492 SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMIL 551
SL GKQIH I+ YE V ALV++Y KC ++ + +F DV+ +I+
Sbjct: 458 SLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIV 517
Query: 552 GFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
GF N R EA F M GI+P+ +TF G+L AC H G ++ A ++M+ +YG+
Sbjct: 518 GFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLE 577
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P LEHY C++ L + G +E + +N+MP P + + C + A L A +
Sbjct: 578 PYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEK 637
Query: 672 LNELNPWAPFQFKITTNRF 690
L + P P + +N +
Sbjct: 638 LLKGFPDDPSVYTSLSNAY 656
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 278/535 (51%), Gaps = 40/535 (7%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA-GNGKEAVVMFFKM 235
NV ++++ AY K +T AR +FD +++ VS+N ++ Y+ + G EA+ +F +M
Sbjct: 48 NVFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRM 107
Query: 236 --LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
R+ I T N L + L G Q+H ++K + L SL +MY KCG
Sbjct: 108 QSARDTIGIDEITLTNMLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 167
Query: 294 RLEDARGLLDQPDER-NIISWTSIVSGYAISGRIREARELFNEMPE-RNVISWNAMLAGY 351
++A L DE +++S ++V+ G++ A +F + PE ++ +SWN ++AGY
Sbjct: 168 CFQEACNLFGSCDEMVDLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGY 227
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+++ +++L F M + D ++ TL +LN C+ L K+GK VH ++ + YSSN
Sbjct: 228 SQNGYMEKSLTFFVEMIENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQ 287
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQM-----------------------SQR-------R 441
F+S+ ++D Y KCGN+R A + + ++ +QR R
Sbjct: 288 FISSGVVDFYSKCGNIRYAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLER 347
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQI 499
+ V W A+ +GY + Q E F E + + P ++L ACA + L GKQI
Sbjct: 348 NSVVWTALCSGYVKSQQCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQI 407
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFK--ESSSLDVIICNSMILGFCHNE 557
H +++R ++++ +LV++Y+KC + YA ++F+ S D I+ N +I G+ H+
Sbjct: 408 HAYILRMRFKVDKKLLSSLVDMYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAGYAHHG 467
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+A+E+F M + +KPD +TF +L AC H G V+L QFF SM Y ++P++ HY
Sbjct: 468 FENKAIELFQEMLNKSVKPDAVTFVALLSACRHRGLVELGEQFFMSME-HYNVLPEIYHY 526
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
CM+ +Y R +++ +F+ ++P + + C+ + A L + A L
Sbjct: 527 ACMVDMYGRANQLEKAVEFMRKIPIKIDATIWGAFLNACQMSSDAALVKQAEEEL 581
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 148/533 (27%), Positives = 252/533 (47%), Gaps = 49/533 (9%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPER 106
L L ++ + EA KL + P P VF N I Y K NL AR LFD R
Sbjct: 23 QLIHLYSNHGLLQEAHKLFDEM----PHPNVFSWNAIIMAYIKAHNLTQARALFDSASHR 78
Query: 107 DGGSWNAMLGAYT-QNGFPGRTLELFLDMNHS--GVSANQITYANVLRSSAEELELGVSK 163
D S+N++L AY +G+ L+LF M + + ++IT N+L +A+ L K
Sbjct: 79 DLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLCYGK 138
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD------DIQNKNA-------- 209
Q+H +VK + SSL+D Y KC +A +F D+ +KNA
Sbjct: 139 QMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAACCRE 198
Query: 210 -------------------VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
VSWN ++ Y G ++++ F +M+ I T A+
Sbjct: 199 GKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGIDFNEHTLASV 258
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L ACS L G +H ++K + + + + + Y KCG + A + + ++
Sbjct: 259 LNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVYAKIGIKSP 318
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+ S+++ Y+ G + EA+ LF+ + ERN + W A+ +GY +S EA+ +F +T
Sbjct: 319 FAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQC-EAVFKLFREFRT 377
Query: 371 TKDI--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ + D + + IL CA +++ +GK++H +I R + + + ++L+DMY KCGN+
Sbjct: 378 KEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDKKLLSSLVDMYSKCGNVA 437
Query: 429 SARIWFYQMSQR-RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAA 486
A F ++ RD + +N ++ GYA G +A+ F EM +P TF LL+A
Sbjct: 438 YAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALLSA 497
Query: 487 CANISSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFKE 537
C + +E G+Q F+ Y + + +V++Y + LE A+ ++
Sbjct: 498 CRHRGLVELGEQF--FMSMEHYNVLPEIYHYACMVDMYGRANQLEKAVEFMRK 548
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 189/422 (44%), Gaps = 50/422 (11%)
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L +Y G L++A L D+ N+ SW +I+ Y + + +AR LF+ R+++S+
Sbjct: 24 LIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNLTQARALFDSASHRDLVSY 83
Query: 345 NAMLAGYTRSLLWK-EALDFVFLMR--KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
N++L+ Y S ++ EALD M+ + T ID++TL +LN+ A L + GK++H +
Sbjct: 84 NSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNMLNLAAKLRVLCYGKQMHSY 143
Query: 402 IHRNDYSSNIFVSNALLDMYRKC--------------------------------GNLRS 429
+ + + F ++L+DMY KC G +
Sbjct: 144 MVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDLVSKNAMVAACCREGKMDM 203
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA 488
A F++ + +D VSWN ++ GY++ G E+++T F EM + ++ T ++L AC+
Sbjct: 204 ALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIENGIDFNEHTLASVLNACS 263
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ + GK +H +V++ Y N +V+ Y+KC + YA V+ + S
Sbjct: 264 ALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCGNIRYAELVYAKIGIKSPFAVAS 323
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKY 608
+I + EA +F + ++ + + + + + + + F R K
Sbjct: 324 LIAAYSSQGNMTEAQRLFDSL----LERNSVVWTALCSGYVKSQQCEAVFKLFREFRTKE 379
Query: 609 GIIPQLEHY-----ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD---KCRKNG 660
++P C I+ G K++ ++ RM F +L + D KC
Sbjct: 380 ALVPDAMIIVSILGACAIQADLSLG--KQIHAYILRMRFKVDKKLLSSLVDMYSKCGNVA 437
Query: 661 YA 662
YA
Sbjct: 438 YA 439
>gi|125541042|gb|EAY87437.1| hypothetical protein OsI_08845 [Oryza sativa Indica Group]
Length = 644
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 276/570 (48%), Gaps = 59/570 (10%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPT---------PPVF---LLNRAIECYGKCGNLD 94
H F C ++ A ++L V PT PP + R++ GNL
Sbjct: 42 HHFLRCVAASAATLQKELT---VPRTPTAAQSPGPVNPPTLFDRMPERSVAMVSAAGNLL 98
Query: 95 D---------ARGLFDEMPERDGG--SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
D RG E P RDGG S +A + A G +ELF M GV ++
Sbjct: 99 DEMSRTCGAGQRGRPVETPPRDGGGKSASAAIVALAHAGRHAEVVELFCRMRRGGVPVSR 158
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+VL + A ++G+ + +H L++K G C +VI+ ++LVD Y ++ DAR+ FD+
Sbjct: 159 FVLPSVLAACAGLRDIGMLRAVHALVIKCGLCQHVIVGTALVDGYTDFGLVDDARKAFDE 218
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I + N VSW+V++ Y + +E + F M R + P + A+ AC L G
Sbjct: 219 ITDANIVSWSVLIGGYARSSRWEETLDAFSAMRRAGVLPNDSVLVMAIQACGALGRLVHG 278
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
Q+HG+ + + F+ + V L +MY KC
Sbjct: 279 KQLHGLAVVLGFDRNATVWNCLMDMYGKC------------------------------- 307
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
G I + +F M R+ +SWN +++ Y R L +EALD + M+++ +D+ TLG +
Sbjct: 308 GDIDSCKMVFETMIGRDQVSWNTLISSYARVGLCEEALDMIVQMQESGYIVDRFTLGSGV 367
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA L++I G+ HG++ R +++ +AL+DMY KC N+ A I F +M +R +
Sbjct: 368 TACARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDER-NY 426
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF 502
VSW+A+L+GY Q + A+ F +M + ++ F LL C + E G+QIH
Sbjct: 427 VSWDALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQIHGH 486
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
I+ ++NVV L+++Y KC C+E A +F + ++I N+++ G+ + +
Sbjct: 487 AIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQPVAT 546
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+ ++ M+ I+PD T G+L C ++G
Sbjct: 547 INIYRQMELACIRPDKYTLAGLLSLCRYQG 576
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 235/488 (48%), Gaps = 33/488 (6%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
PVS + + CA + I R + + ++ V + ++ Y G +DDAR
Sbjct: 155 PVSRFVLPSVLAACAGLRDIGMLRAVHALVIKCGLCQHVIVGTALVDGYTDFGLVDDARK 214
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
FDE+ + + SW+ ++G Y ++ TL+ F M +GV N +++
Sbjct: 215 AFDEITDANIVSWSVLIGGYARSSRWEETLDAFSAMRRAGVLPNDSVLVMAIQACGALGR 274
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L KQLHGL V GF N + + L+D YGKC + + +F+ + ++ VSWN ++
Sbjct: 275 LVHGKQLHGLAVVLGFDRNATVWNCLMDMYGKCGDIDSCKMVFETMIGRDQVSWNTLISS 334
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G +EA+ M +M FT + + AC+ L+ G HG +++ + D
Sbjct: 335 YARVGLCEEALDMIVQMQESGYIVDRFTLGSGVTACARLADIDSGRAFHGYLVRRLLDTD 394
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ +L +MY KC +E A + D+ DERN +SW +++SGY + ++ A E+F +M
Sbjct: 395 VIQGSALVDMYGKCHNMELAHIVFDRMDERNYVSWDALLSGYVENEQVDLALEIFRQMGC 454
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
N I +N Q +L +C + G+++
Sbjct: 455 AN-IKYN------------------------------QHNFANLLKLCGSQRYKEYGRQI 483
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG + N+ + L+DMY KCG + AR+ F +M++ R+ +SWNA+L+GYA GQ
Sbjct: 484 HGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMNE-RNLISWNALLSGYAADGQ 542
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+ + +M+ RP K+T LL+ C L G+QIH +I+ E+NVV +
Sbjct: 543 PVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTI 602
Query: 518 LVEVYTKC 525
LV +Y KC
Sbjct: 603 LVHMYIKC 610
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 127/258 (49%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CA I R LV V + ++ YGKC N++ A +FD M ER+ SW
Sbjct: 370 CARLADIDSGRAFHGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHIVFDRMDERNYVSW 429
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
+A+L Y +N LE+F M + + NQ +AN+L+ + +Q+HG +K
Sbjct: 430 DALLSGYVENEQVDLALEIFRQMGCANIKYNQHNFANLLKLCGSQRYKEYGRQIHGHAIK 489
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
NV+LE+ L+D Y KC + AR +F + +N +SWN ++ Y G + +
Sbjct: 490 TINKMNVVLETELIDMYAKCGCIEVARLLFLRMNERNLISWNALLSGYAADGQPVATINI 549
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ +M IRP +T A L C + + G QIH +IK+ E + V+ L MY+K
Sbjct: 550 YRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQIHAHLIKMGSEMNVVMQTILVHMYIK 609
Query: 292 CGRLEDARGLLDQPDERN 309
C R +DA + +ERN
Sbjct: 610 CMRQQDAENVCIMIEERN 627
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A+L +LC S + R++ + + V L I+ Y KCG ++ AR LF M
Sbjct: 464 FANLLKLCGSQRYKEYGRQIHGHAIKTINKMNVVLETELIDMYAKCGCIEVARLLFLRMN 523
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ SWNA+L Y +G P T+ ++ M + + ++ T A +L + L +Q
Sbjct: 524 ERNLISWNALLSGYAADGQPVATINIYRQMELACIRPDKYTLAGLLSLCRYQGLLHYGRQ 583
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
+H ++K G NV++++ LV Y KCM DA + I+ +N+ + + Y
Sbjct: 584 IHAHLIKMGSEMNVVMQTILVHMYIKCMRQQDAENVCIMIEERNSYVLDAFSKVY 638
>gi|357475531|ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509106|gb|AES90248.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 763
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 184/656 (28%), Positives = 303/656 (46%), Gaps = 75/656 (11%)
Query: 73 PTPP-VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF 131
P PP V N +I + K G L +AR +FDEMP R SWN M+ Y+Q G L L
Sbjct: 32 PYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLV 91
Query: 132 LDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF----------------- 174
M+ S V N+++++ L + L + KQ+H L+ K G+
Sbjct: 92 SFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQC 151
Query: 175 CG--------------NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
CG N +L S ++ Y + ++ DA +F+ + ++ V+W ++ Y
Sbjct: 152 CGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYA 211
Query: 221 VAGNGKEAVVMFFKMLR--EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+G E + F +R ++ P FT L C+ L Y G +HG+ IK F+ D
Sbjct: 212 KREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFD 271
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V +L E Y ++DA+ + + E S++ G GR++EA +F +
Sbjct: 272 NSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLR 331
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ +IS N M+ GY S +K K+ K ++++L + ++
Sbjct: 332 DKTLISNNLMIKGYAMSGQFK----------KSKKLFEKMSLKHLTSL------------ 369
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
N ++ +Y K G L A F + R+ V+WN++++GY G
Sbjct: 370 -----------------NTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNG 412
Query: 458 QSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
+ EA+ + M+ + S+ TF L ACA + S +QG+ +H + + Y+ NV
Sbjct: 413 EHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGT 472
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
ALV+ Y+KC L A R F S +V ++I G+ ++ G EA+ F M +G+ P
Sbjct: 473 ALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVP 532
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
+ TF +L AC H G V L+FF SM+ Y I P +EHY C++ L R G +KE E+F
Sbjct: 533 NAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEF 592
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
+ +MP + + + LGE AA +L L+P + +N + R
Sbjct: 593 IIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYAR 648
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 173/367 (47%), Gaps = 49/367 (13%)
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
QP ++IS ++ +A +G++ EAR +F+EMP R V SWN M++GY++ + EAL
Sbjct: 30 SQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALT 89
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
V M + ++V+ L+ C + +GK++H + ++ Y V +ALL Y
Sbjct: 90 LVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYV 149
Query: 423 KCGNLRSARIWFYQMS---------------QR---------------RDKVSWNAVLTG 452
+C +R A + F ++ QR RD V+W +++G
Sbjct: 150 QCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISG 209
Query: 453 YARRGQS-EEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
YA+R E A+ F M+ E P++FT + +L CA + L GK +H I++ ++
Sbjct: 210 YAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFD 269
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFK----ESSSLDVIICNSMILGFCHNERGREALEV 565
+ AL E Y ++ A RV++ E+ S + +S+I G R +EA +
Sbjct: 270 FDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACS---NVADSLIGGLVSMGRVKEAGMI 326
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F ++ + + +++ G ++ G K + + F+ M K+ L MI +Y
Sbjct: 327 FYGLRDKTLISNNLMIKGYAMS----GQFKKSKKLFEKMSLKH-----LTSLNTMITVYS 377
Query: 626 RYGYMKE 632
+ G + E
Sbjct: 378 KNGELDE 384
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 7/201 (3%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S S ++ LF+ CA + + + L ++L V++ ++ Y KCG+L DA+ F
Sbjct: 432 SRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSF 491
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEELE 158
+ + +W A++ Y +G + F M GV N T+ VL S A ++
Sbjct: 492 TSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVD 551
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVR 217
G+ K H + + + + +VD G+ + +A + K + V W ++
Sbjct: 552 EGL-KFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLN 610
Query: 218 RYLVAGN---GKEAVVMFFKM 235
N G+ A V F +
Sbjct: 611 ASCFWNNVELGERAAVKLFSL 631
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 170/597 (28%), Positives = 286/597 (47%), Gaps = 68/597 (11%)
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
++ FL H ++ + Y+N++ L +K +H ++K GF + L + +D
Sbjct: 22 MQPFLKKAHGPLATSLSYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDL 81
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-------- 239
Y + D+ R+F+DI +KN +SWN+ ++ ++ G + A +F +M + D
Sbjct: 82 YSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMI 141
Query: 240 -----------------------IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
IRP FT++ L SF+SS G QIH +I+ +
Sbjct: 142 SGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLL---SFVSSACRGKQIHASMIRNGVD 198
Query: 277 GDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+VV+G SL MY K G ++ A G+ F
Sbjct: 199 LSNVVVGNSLIGMYGKFGVVDYAFGV-------------------------------FIT 227
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M E ++ SWN+++ +S AL LMR DQ T+ ++ VC+ L +++ G
Sbjct: 228 MEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKG 287
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++ R + SN VS+A +D++ KC L + F ++ Q D V NA+++ YA
Sbjct: 288 EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQW-DSVLCNAMISSYAW 346
Query: 456 RGQSEEAMTSFS-EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G E A+ F ++ RP++FT +L+A + + ++QG QIH V+++ E +V+
Sbjct: 347 HGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIV 406
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+LVE+Y K ++ A++ F + + D+I N+MI+G +N R +ALE+F + G
Sbjct: 407 ASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGP 466
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PD IT G+LLAC G V L F SM +YG+IP +EHY C++ + R G +KE
Sbjct: 467 PPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAM 526
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFD 691
D V MP P+ + + C G E A R+ EL P + + + ++
Sbjct: 527 DIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYE 583
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 146/258 (56%), Gaps = 4/258 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I YGK G +D A G+F M E D SWN+++ + ++G+ L F+ M G S
Sbjct: 206 NSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYS 265
Query: 141 ANQITYANVLR--SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+Q T + V+ S+ ++LE G +Q+ L ++ GF N I+ S+ +D + KC + D+
Sbjct: 266 PDQFTVSTVITVCSNLQDLEKG--EQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSV 323
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F++I ++V N ++ Y G G+ A+ +F LRE++RP FT + L A S L
Sbjct: 324 RVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILL 383
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
+G QIH +++K E D +V SL EMY K G ++ A + R++ISW +++
Sbjct: 384 PVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIM 443
Query: 319 GYAISGRIREARELFNEM 336
G A +GR+ +A E+F E+
Sbjct: 444 GLAYNGRVSKALEIFKEL 461
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 223/501 (44%), Gaps = 72/501 (14%)
Query: 35 KSDEPVSYSL--YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
K+ P++ SL Y++L + C K++ A+ + + L+ FL NR ++ Y + G
Sbjct: 28 KAHGPLATSLSYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGT 87
Query: 93 -------------------------------LDDARGLFDEMPERDGGSWNAMLGAYTQN 121
L+ AR +FDEMP+RD SWN M+ Y
Sbjct: 88 GNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSF 147
Query: 122 GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF-CGNVIL 180
G F +M +G+ + TY+ +L + KQ+H +++ G NV++
Sbjct: 148 GLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHASMIRNGVDLSNVVV 204
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
+SL+ YGK V+ A +F ++ + SWN ++ +G A+ F M
Sbjct: 205 GNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGY 264
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
P FT + + CS L +G QI + I++ F + +V + +++ KC RLED+
Sbjct: 265 SPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVR 324
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ ++ I W S++ NAM++ Y + A
Sbjct: 325 VFEE-----IYQWDSVLC--------------------------NAMISSYAWHGFGENA 353
Query: 361 LD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
L FV +R+ + + TL ++L+ + L + G ++H + ++ S++ V+++L++
Sbjct: 354 LQLFVLTLRENLRP-TEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVE 412
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKF 478
MY K G + SA F ++ RD +SWN ++ G A G+ +A+ F E+ P +
Sbjct: 413 MYAKFGLIDSAMKTFAKIGA-RDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEI 471
Query: 479 TFETLLAACANISSLEQGKQI 499
T +L AC +++G I
Sbjct: 472 TLAGVLLACNVGGLVDEGLSI 492
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 14/253 (5%)
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
+I+ + KC L+D+ +F+E+ + D NAM+ +Y +GF L+LF+ +
Sbjct: 309 SIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPT 368
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ T + VL + + L + Q+H L+VK G +VI+ SSLV+ Y K ++ A + F
Sbjct: 369 EFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFA 428
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I ++ +SWN ++ G +A+ +F ++L P T A L AC+ E
Sbjct: 429 KIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDE 488
Query: 263 GMQI-------HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWT 314
G+ I +GVI I+ + +M + G+L++A +++ P E + + W
Sbjct: 489 GLSIFSSMEKEYGVIPAIEH------YACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG 542
Query: 315 SIVSGYAISGRIR 327
S++ I G +R
Sbjct: 543 SLLCACEIYGDLR 555
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/600 (25%), Positives = 284/600 (47%), Gaps = 66/600 (11%)
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+++ + L+ A + +Q+H +++K GF N + +SL++ Y KC +++ AR +FD
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 203 DIQNKNAVSWNVIVRRY--------------------------LVAGNGK-----EAVVM 231
++VS N+++ Y ++ G + EA+ +
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
F M + P T A+ + ACS + + +H ++IK+ F G ++ +L MY
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 411
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
L+D + L ++ RN +SW ++ GY SG + +ARELF +PER+V SW M+ G+
Sbjct: 412 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 471
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+ ++AL MRK+ ++V + +L+ C I+ G++ H I +N +
Sbjct: 472 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 531
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-- 469
F+ ++ Y C + A + YQMS + S N ++ G+ + G ++A F M
Sbjct: 532 FIQATIISFYAACRRIDLAYLQ-YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPE 590
Query: 470 ----QWET--------------------------RPSKFTFETLLAACANISSLEQGKQI 499
W T P++ T ++ +A A + L +G+
Sbjct: 591 KDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWA 650
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE--SSSLDVIICNSMILGFCHNE 557
H +V +N A++++Y KC ++ A+ VF++ + V N++I G +
Sbjct: 651 HEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHG 710
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
+LE+F +++ IK + ITF G+L AC H G V++ ++F SM+ ++G+ P ++HY
Sbjct: 711 HANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHY 770
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
C++ L R G ++E E+ V MP V + + R +G +GE AA L L P
Sbjct: 771 GCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQP 830
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 152/585 (25%), Positives = 281/585 (48%), Gaps = 71/585 (12%)
Query: 37 DEPVSYSLYAHL-----FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
D+P S SL L + CASS AI +++ + ++ + F+LN I Y KCG
Sbjct: 222 DQPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCG 281
Query: 92 -------------------------------NLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
L++AR LF +MPER S+ M+ Q
Sbjct: 282 LLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQ 341
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVIL 180
N G +E+F DM +GV+ N++T A+V+ + + + + LH L++K F G V++
Sbjct: 342 NDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLI 401
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG----------------- 223
++L+ Y + D +R+F+++ +N VSWNV+++ Y+ +G
Sbjct: 402 STNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDV 461
Query: 224 -------NG-------KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
+G ++A++++ M + D+ P + L AC S EG Q H +
Sbjct: 462 FSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSL 521
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
I+K F D + ++ Y C R++ A D+ ++ S ++ G+ +G I +A
Sbjct: 522 IVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQA 581
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
R++F+ MPE++V SW+ M++GY ++ L ALD M + + +++T+ + + A L
Sbjct: 582 RQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAAL 641
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS-WNA 448
++ G+ H ++ N +S A++DMY KCG++ +A F Q+ + VS WNA
Sbjct: 642 GKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNA 701
Query: 449 VLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQ-IHCFVIRN 506
++ G A G + ++ FS +Q + + + TF +L+AC + +E G++ ++
Sbjct: 702 IICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQH 761
Query: 507 CYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMI 550
E N+ G LV++ + L A + + DV+I +++
Sbjct: 762 GVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLL 806
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 175/442 (39%), Gaps = 68/442 (15%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N ++ Y K G +D AR LF+ +PERD SW M+ + Q + L L+ M S +
Sbjct: 434 NVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLH 493
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM-------- 192
N++ ++L + + + + +Q H LIVK GF ++++++ Y C
Sbjct: 494 PNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQ 553
Query: 193 -----------------------VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
++ AR++FD + K+ SW+ ++ Y A+
Sbjct: 554 YQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVAL 613
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
+F M+ + P T + A + L EG H + +D + ++ +MY
Sbjct: 614 DLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMY 673
Query: 290 VKCGRLEDARGLLDQ-PDERNIIS-WTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
KCG ++ A + Q D+ + +S W +I+ G A+ G + E+F+ + R++
Sbjct: 674 AKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSI------ 727
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH-GFIHRND 406
++ +T +L+ C +++G+ ++
Sbjct: 728 -------------------------KLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHG 762
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAM 463
NI L+D+ + G LR A M + D V W +L G+ E A
Sbjct: 763 VEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAA 822
Query: 464 TSFSEMQWETRPSKFTFETLLA 485
+ + +Q P + L A
Sbjct: 823 ENLARLQPSHGPGRVLLSNLYA 844
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 265/536 (49%), Gaps = 44/536 (8%)
Query: 181 ESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI 240
++L+ A + + A+RM ++ ++ VS+ ++ AG+ ++A+ +F ML +D+
Sbjct: 81 HNTLLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDV 140
Query: 241 RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARG 300
P T A + A + +P +HGV ++ +G +V +L Y ++ AR
Sbjct: 141 PPNEVTLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARA 200
Query: 301 LLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA 360
+ + ++N ++W ++++GY +G I A E+F +PER+V+SW M+ GY R+ EA
Sbjct: 201 VFEWMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEA 260
Query: 361 L-DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
L +V +M + + L CA + + G+++H I ++ + +++FV L+
Sbjct: 261 LRTYVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIH 320
Query: 420 MYRKCGNLRSARIWF------------------------------YQMSQRRDKVSWNAV 449
Y C L A++ F + +D +SW+ +
Sbjct: 321 FYGSCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTL 380
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
L+GY + G S+ A+ F M +P+ T + L+A AN +LEQG+ IH ++I
Sbjct: 381 LSGYVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSI 440
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVF----KESSSL---DVIICNSMILGFCHNERGRE 561
+ L+++Y KC + A+ +F ++ SSL + +IC+ I G H
Sbjct: 441 HLTDNLIAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAH-----M 495
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
+LE+F ++ IKP+ IT+ G+L AC H G V F+SMR +YGI P ++HY CM+
Sbjct: 496 SLELFSQLQSSNIKPNSITYIGVLNACCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMV 555
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
L R GY++E E + MP V + I R +G LGE AA L +L+P
Sbjct: 556 DLLGRAGYLEEAERLIKTMPVKSDVVIWGSILAAARSHGNVALGEKAAEELAKLDP 611
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 239/507 (47%), Gaps = 38/507 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N + + G+LD A+ + EMP+RD S+ +L A + G + +F M V
Sbjct: 82 NTLLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDVP 141
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N++T A V+ + A + +HG+ V+RG G VI+ ++LV AY + AR +
Sbjct: 142 PNEVTLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARAV 201
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM--------------------LREDI 240
F+ + +KN V+WN ++ Y+ AG A MF ++ + E +
Sbjct: 202 FEWMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEAL 261
Query: 241 RPLNFTFAN-------ALF-----ACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
R A AL AC+ ++ EG Q+H VI+K F+ V +L
Sbjct: 262 RTYVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHF 321
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
Y C L+ A+ D+ +I SW + ++G + EAR+LF+ MPE++ ISW+ +L
Sbjct: 322 YGSCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLL 381
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
+GY +S AL LM + +TL L+ A ++ G+ +H +I
Sbjct: 382 SGYVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIH 441
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS-WNAVLTGYARRGQSEEAMTSFS 467
+ L+DMY KCG++ A + F + ++ +S WNA++ A G + ++ FS
Sbjct: 442 LTDNLIAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFS 501
Query: 468 EMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR--GALVEVYTK 524
++Q +P+ T+ +L AC + + +GK H +R Y I + G +V++ +
Sbjct: 502 QLQSSNIKPNSITYIGVLNACCHAGMVTEGKH-HFESMRREYGIPPTIKHYGCMVDLLGR 560
Query: 525 CCCLEYAIRVFKE-SSSLDVIICNSMI 550
LE A R+ K DV+I S++
Sbjct: 561 AGYLEEAERLIKTMPVKSDVVIWGSIL 587
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 169/423 (39%), Gaps = 68/423 (16%)
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
+ P N + Y K G +D A +F+ +PERD SW M+ Y + L
Sbjct: 204 WMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRT 263
Query: 131 FLDM-NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
++ M N + ++ A + +QLH +I+K GF ++ ++++L+ YG
Sbjct: 264 YVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYG 323
Query: 190 KC-------------------------------MVMTDARRMFDDIQNKNAVSWNVIVRR 218
C +M +AR++FD++ K+ +SW+ ++
Sbjct: 324 SCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSG 383
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y+ +G+ A+ +F ML ++P + T A+ L A + + +G IH II
Sbjct: 384 YVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLT 443
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDER--NIISWTSIVSGYAISGRIREARELFNEM 336
D ++ L +MY KCG + DA L + E+ ++ W +++ AI G + ELF+++
Sbjct: 444 DNLIAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQL 503
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
N+ + +T +LN C + GK
Sbjct: 504 QSSNI-------------------------------KPNSITYIGVLNACCHAGMVTEGK 532
Query: 397 EVHGFIHRNDYS--SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
H R +Y I ++D+ + G L A M + D V W ++L
Sbjct: 533 H-HFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKSDVVIWGSILAAAR 591
Query: 455 RRG 457
G
Sbjct: 592 SHG 594
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 37/323 (11%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD----------------- 94
CA A++E ++L + ++ +F+ I YG C LD
Sbjct: 287 CARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSDKSHIASW 346
Query: 95 --------------DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
+AR LFD MPE+D SW+ +L Y Q+G L+LF M +GV
Sbjct: 347 NAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLGAGVK 406
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
N IT A+ L + A L + +H I+ + L + L+D Y KC + DA +
Sbjct: 407 PNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGSVADAVLL 466
Query: 201 FDDIQNK--NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
F+ ++ K + WN ++ + G+ ++ +F ++ +I+P + T+ L AC
Sbjct: 467 FNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSITYIGVLNACCHAG 526
Query: 259 SPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTS 315
EG H ++ ++ + G + ++ + G LE+A L+ P + +++ W S
Sbjct: 527 MVTEGKH-HFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKSDVVIWGS 585
Query: 316 IVSGYAISGRIREARELFNEMPE 338
I++ G + + E+ +
Sbjct: 586 ILAAARSHGNVALGEKAAEELAK 608
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 255/515 (49%), Gaps = 43/515 (8%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAY-GKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q+H ++ + S L+D+ K + + A +F I N+ N +V+ Y +
Sbjct: 29 QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTES 88
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+ A+ + +M R+ + N+T+ L AC + EG + G +K F GD V+
Sbjct: 89 STPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVV 148
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
L MY +CG AR + D E++++SW S++ GY G + A+ +F+EMPER+V+
Sbjct: 149 NGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVV 208
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SW+ M+ GY + KMG+ +
Sbjct: 209 SWSIMIDGYGK---------------------------------------KMGEVNRARV 229
Query: 403 HRNDYSSNIFVS-NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + VS N+++D Y K G + AR F +M Q+ + +SW+ ++ GYA+ S+E
Sbjct: 230 FFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQK-NVISWSIMIDGYAQHRDSKE 288
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F +M + +P + + ++AC+ + +L+QG+ IH ++ RN +++V + ALV+
Sbjct: 289 ALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVD 348
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y KC + A R+F +V+ N MI+G N G+EALE F M+ E I D +
Sbjct: 349 MYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLL 408
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
F G+L+AC H V L F+ M+ Y + P+LEHY C++ L R G + ++++ + M
Sbjct: 409 FLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSM 468
Query: 641 PFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
P P + + CR + TL E RL EL
Sbjct: 469 PMKPNAALWGSLLLACRIHQNVTLAEIVVERLAEL 503
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 215/457 (47%), Gaps = 43/457 (9%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE-CYGKCGNLDDARGLFDEMPER 106
L L SK + ++ + L+T F +R ++ K N++ A +F ++ +
Sbjct: 14 LLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+ N M+ YT++ P R L + +M G+ + TY VL++ L +
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQ 133
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
G VKRGF G+V + + L+ Y +C AR +FD K+ VSWN ++ Y+ G +
Sbjct: 134 GEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEME 193
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A MF +M D+ + I ID G
Sbjct: 194 NAQNMFDEMPERDVVSWS--------------------------IMIDGYGK-------- 219
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
K G + AR D R+++SW S++ GYA G + ARE+F++M ++NVISW+
Sbjct: 220 ----KMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSI 275
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
M+ GY + KEAL+ M D+V++ ++ C+ L + G+ +H ++ RN
Sbjct: 276 MIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNR 335
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+I V AL+DMY KCG+ AR F M + R+ VSWN ++ G G +EA+ F
Sbjct: 336 MLLDIVVQTALVDMYLKCGSRDEARRIFNSMPE-RNVVSWNVMIVGLGMNGFGKEALECF 394
Query: 467 SEMQWETRP-SKFTFETLLAACANISSLEQGKQIHCF 502
++M+ E P F +L AC++ + + +G +H F
Sbjct: 395 TQMEMERIPMDDLLFLGVLMACSHANLVTEG--LHIF 429
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 11/334 (3%)
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
PT + N I+ Y K G ++ AR +FD+M +++ SW+ M+ Y Q+ L LF
Sbjct: 235 PTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFR 294
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ ++++ + + ++ L + +H + + +++++++LVD Y KC
Sbjct: 295 QMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCG 354
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+ARR+F+ + +N VSWNV++ + G GKEA+ F +M E I + F L
Sbjct: 355 SRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLM 414
Query: 253 ACSFLSSPYEGMQIHGVIIKI-DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNI 310
ACS + EG+ I + + E G L ++ + G+L+ + ++ P + N
Sbjct: 415 ACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNA 474
Query: 311 ISWTSIVSGYAISGRIREAR---ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
W S++ I + A E E+ + + M Y +W+ L LM
Sbjct: 475 ALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLM 534
Query: 368 --RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
RK KDI + ++ V + E G++ H
Sbjct: 535 KERKMKKDIGRS----VIEVDGNVEEFVSGEKSH 564
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/583 (28%), Positives = 277/583 (47%), Gaps = 35/583 (6%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
WN + + GF ++LE + M HSG+ N T+ +L++ A +G LH ++
Sbjct: 21 WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
GF +V +++SLVD Y K + +R++FD+ ++ +SWN ++ Y + EA+
Sbjct: 81 HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
Query: 231 MFFKMLREDIRPLNFTFANAL--FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
+F +ML P + TF + L FA S ++G +HG + K D V SL +M
Sbjct: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAML 348
YV G+++ A + YAIS E+ VISW ML
Sbjct: 201 YVNFGQIDSACSVF-----------------YAIS--------------EKTVISWTIML 229
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYS 408
GY ++ + + MR+ +D+ I++ C L + +G +H + +
Sbjct: 230 GGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLK 289
Query: 409 SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS- 467
+ L+ MY KCG+L SAR F +S++ SW ++++GYA G EA++ FS
Sbjct: 290 YEDPIGCLLISMYSKCGDLLSARAVFDLLSEK-SIYSWTSMISGYANAGYPREALSLFSM 348
Query: 468 EMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCC 527
Q RP+ T ++ACA++ SL ++I F+ ++ + +L+ +Y K
Sbjct: 349 ATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGS 408
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
+E A +VF D+ +SM+ G+ + G + + +F M++ GIKPD + ILLA
Sbjct: 409 IEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLA 468
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C H G V+ L+ F +M+ YGI+P + HY C++ + R G+++ + + MP
Sbjct: 469 CSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQ 528
Query: 648 MLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR LGE A R L NP P + N +
Sbjct: 529 AWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLY 571
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 236/495 (47%), Gaps = 38/495 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
L + CA+ +I + L ++L+ VF+ ++ Y K NL +R +FDE R
Sbjct: 59 LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRS 118
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE--LGVSKQL 165
SWN+M+ AY+++ L+LF +M G N T+ ++L A+ L + L
Sbjct: 119 VISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLL 178
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG + K + +E+SLV Y + A +F I K +SW +++ YL AG
Sbjct: 179 HGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAV 238
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ F +M + ++ F F + + +C L + + G +H +++K + +D + L
Sbjct: 239 AKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLL 298
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY KCG L AR + D E++I SWTS++SGYA +G REA LF+ + NV
Sbjct: 299 ISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNG 358
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
AMLA ++ CA L + M +E+ FI ++
Sbjct: 359 AMLA-------------------------------TAISACADLGSLSMRREIEAFIQQD 387
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+S+ VS +L+ +Y K G++ A F M RD +W++++ GYA G E+ M
Sbjct: 388 GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIH-RDLAAWSSMMNGYAVHGMGEKTMNL 446
Query: 466 FSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI--NVVCRGALVEVY 522
F EMQ +P + ++L AC++ +E G + H ++ Y I +V LV++
Sbjct: 447 FHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE-HFKNMQLDYGIVPTMVHYTCLVDIL 505
Query: 523 TKCCCLEYAIRVFKE 537
++ LE A+ +E
Sbjct: 506 SRAGHLELALNTIQE 520
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 205/444 (46%), Gaps = 44/444 (9%)
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I K WN+ +R + G +++ + M I NFTF L AC+ L+S +G
Sbjct: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+H +I + FE D V SL +MY K L +R + D+ R++ISW S+++ Y+ S
Sbjct: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
Query: 324 GRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
R+ EA +LF EM E N ++ ++L+G+ T
Sbjct: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADP-----------------------TH 169
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
G + G+ +HG + + + V N+L+ MY G + SA FY +S+
Sbjct: 170 GSLFQ----------GRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISE 219
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
+ +SW +L GY + G + +FS+M Q KF F ++++C + +L G
Sbjct: 220 KT-VISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSS 278
Query: 499 IHCFVIRNC--YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
+H +++ YE + C L+ +Y+KC L A VF S + SMI G+ +
Sbjct: 279 LHSLLLKTGLKYEDPIGC--LLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANA 336
Query: 557 ERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEH 616
REAL +F + + ++P+ + AC G++ + + ++ + G+ +
Sbjct: 337 GYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRRE-IEAFIQQDGLASDSQV 395
Query: 617 YECMIKLYCRYGYMKELEDFVNRM 640
+I LYC++G +++ E N M
Sbjct: 396 STSLIHLYCKFGSIEKAEKVFNSM 419
>gi|225217042|gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 255/529 (48%), Gaps = 35/529 (6%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKC-MVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H + G + L ++L+ Y + + A R FDD+ ++ V+ + I+ +L AG
Sbjct: 59 IHARAARGGLLADRYLANALLSFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 118
Query: 224 NGKEAVVMFFKMLRE--DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
+ A+ ML E D+ P F+ A+ ACS L G +HG I+ F DD+V
Sbjct: 119 MPRRALASLRSMLAEADDVSPNAHAFSAAVKACSVLRDRNAGACLHGSILVRGFGDDDIV 178
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
L +L +MY DA+ ++ + I +TS++S + + EA F M
Sbjct: 179 LSALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSM----- 233
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
LM + D T G ++ L G++ H
Sbjct: 234 ------------------------LMMNGVRP-DGCTFGSMMTALGNLKRENQGRQAHAQ 268
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ N+ V ++ LDMY KCG++ AR F +M R ++VSW A+L GY + G+ E+
Sbjct: 269 VVTRGLCGNVIVESSTLDMYAKCGSMVEARKVFDRMLVR-NEVSWCALLGGYCQNGEYEK 327
Query: 462 AMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
+ F EM + ++ T+L ACA +SS++ GK+IHC +R +VV ALV++
Sbjct: 328 VVALFREMD-KKDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVESALVDL 386
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++YA VF+ S+ + I N+MI GF N G A+ +F M +EG +PD+I+F
Sbjct: 387 YAKCGAVDYAYTVFEASTVRNTITWNAMIGGFAQNGHGERAINLFDRMVREGPRPDYISF 446
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V+ ++F+SM Y I P +EHY CM+ L R ++E ED +N+ P
Sbjct: 447 VSVLFACSHTGMVEQGRKYFNSMSNNYTIAPGIEHYNCMVDLLSRVELLEEAEDLINKSP 506
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
F + I + + E A+++ EL P + + N +
Sbjct: 507 FRGDSSLWAAILGASATHSNPDVAERVAKKMMELQPQYHLSYVLLENVY 555
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 216/450 (48%), Gaps = 52/450 (11%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
A+ ++ R L + L++FY P +L A FD++P RD + +
Sbjct: 63 AARGGLLADRYLANALLSFYVRLPR--------------HLPHALRAFDDLPRRDVVAHS 108
Query: 113 AMLGAYTQNGFPGRTLELFLDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
++L A+ + G P R L M VS N ++ +++ + + LHG I+
Sbjct: 109 SILAAFLRAGMPRRALASLRSMLAEADDVSPNAHAFSAAVKACSVLRDRNAGACLHGSIL 168
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
RGF + I+ S+LVD YG +DA++ F++++ + + + ++ ++ +EAV
Sbjct: 169 VRGFGDDDIVLSALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWFEEAVR 228
Query: 231 MFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F ML + +RP TF + + A L +G Q H ++ G+ +V S +MY
Sbjct: 229 WFRSMLMMNGVRPDGCTFGSMMTALGNLKRENQGRQAHAQVVTRGLCGNVIVESSTLDMY 288
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG + +AR + D+ RN +SW +++ GY +G + LF EM +
Sbjct: 289 AKCGSMVEARKVFDRMLVRNEVSWCALLGGYCQNGEYEKVVALFREMDK----------- 337
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
KD D +LG +L CAGLS +K GKE+H R
Sbjct: 338 ----------------------KDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWR 375
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
++ V +AL+D+Y KCG + A F + S R+ ++WNA++ G+A+ G E A+ F M
Sbjct: 376 DVVVESALVDLYAKCGAVDYAYTVF-EASTVRNTITWNAMIGGFAQNGHGERAINLFDRM 434
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQ 498
E RP +F ++L AC++ +EQG++
Sbjct: 435 VREGPRPDYISFVSVLFACSHTGMVEQGRK 464
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 162/326 (49%), Gaps = 19/326 (5%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ R+ + +VT V + + ++ Y KCG++ +AR +FD M R+ SW A+LG Y
Sbjct: 261 QGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGSMVEARKVFDRMLVRNEVSWCALLGGYC 320
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
QNG + + LF +M+ + + VLR+ A + K++H ++ G +V+
Sbjct: 321 QNGEYEKVVALFREMDKK--DGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWRDVV 378
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ES+LVD Y KC + A +F+ +N ++WN ++ + G+G+ A+ +F +M+RE
Sbjct: 379 VESALVDLYAKCGAVDYAYTVFEASTVRNTITWNAMIGGFAQNGHGERAINLFDRMVREG 438
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQI-----HGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
RP +F + LFACS +G + + I E + ++ L+ + +
Sbjct: 439 PRPDYISFVSVLFACSHTGMVEQGRKYFNSMSNNYTIAPGIEHYNCMVDLLSRVEL---- 494
Query: 295 LEDARGLLDQPDERNIIS-WTSIVSGYAISGRI----REARELFNEMPERNVISWNAMLA 349
LE+A L+++ R S W +I+ A R A+++ P+ + +S+ +
Sbjct: 495 LEEAEDLINKSPFRGDSSLWAAILGASATHSNPDVAERVAKKMMELQPQYH-LSYVLLEN 553
Query: 350 GYTRSLLWKEALDFVFLM--RKTTKD 373
Y W++AL+ LM RK K+
Sbjct: 554 VYRTVGRWEDALEIRRLMESRKVKKE 579
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
++G +H R ++ +++NALL Y + + + RRD V+ +++L
Sbjct: 54 RLGYCIHARAARGGLLADRYLANALLSFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAA 113
Query: 453 YARRGQSEEAMTSFSEMQWET---RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE 509
+ R G A+ S M E P+ F + AC+ + G +H ++ +
Sbjct: 114 FLRAGMPRRALASLRSMLAEADDVSPNAHAFSAAVKACSVLRDRNAGACLHGSILVRGFG 173
Query: 510 INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF-GL 568
+ + ALV++Y A + F+E + D I S+I F N+ EA+ F +
Sbjct: 174 DDDIVLSALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSM 233
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMR--CKYGIIPQLEHYECMIKLYCR 626
+ G++PD TF ++ A GN+K Q + G+ + + +Y +
Sbjct: 234 LMMNGVRPDGCTFGSMMTAL---GNLKRENQGRQAHAQVVTRGLCGNVIVESSTLDMYAK 290
Query: 627 YGYMKELEDFVNRM 640
G M E +RM
Sbjct: 291 CGSMVEARKVFDRM 304
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 42 YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
YSL + + CA ++ +++ + V + + ++ Y KCG +D A +F+
Sbjct: 343 YSL-GTVLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYTVFE 401
Query: 102 EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
R+ +WNAM+G + QNG R + LF M G + I++ +VL
Sbjct: 402 ASTVRNTITWNAMIGGFAQNGHGERAINLFDRMVREGPRPDYISFVSVL 450
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 292/602 (48%), Gaps = 32/602 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGS-WNAMLGAYTQNGFPGRTLELFLDMNH 136
FL I+ Y K G DA +F E+ ++ WN M+ + + +LEL++
Sbjct: 705 FLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKS 764
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+ V ++ L + ++ +Q+H +VK G + + +SL+ Y KC ++ +
Sbjct: 765 NSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGE 824
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F + +K WN +V Y+ NG A+ +F M ++ + P +FT +N + CS
Sbjct: 825 AETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSM 884
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
G +H + K + + +L +Y KCG DA + +E+++++W S+
Sbjct: 885 FGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSL 944
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+SG +G+ +EA ++F +M + + ++L K DI
Sbjct: 945 ISGLCKNGKFKEALKVFGDMKDDD------------------DSL-------KPDSDI-- 977
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+ ++N CAGL + G +VHG + + N+FV ++L+D+Y KCG A F
Sbjct: 978 --MTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTS 1035
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
M + + V+WN++++ Y+R E ++ F+ M + P + ++L A ++ +SL +
Sbjct: 1036 M-RPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLK 1094
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK +H + +R + + AL+++Y KC +YA +FK+ +I N MI G+
Sbjct: 1095 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 1154
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ R AL +F +KK G PD +TF ++ AC H G V+ FF+ M+ YGI P++E
Sbjct: 1155 HGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKME 1214
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY M+ L R G ++E F+ MP + + R + LG +A +L +
Sbjct: 1215 HYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRM 1274
Query: 676 NP 677
P
Sbjct: 1275 EP 1276
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/607 (24%), Positives = 279/607 (45%), Gaps = 44/607 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + C+S + + + +++ F+ + Y KCG LD A +FD
Sbjct: 564 FPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 623
Query: 105 E-----RDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--L 157
+ RD N+M+ Y + + F M GV + + + V+ +E
Sbjct: 624 QSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNF 683
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIV 216
KQ+HG +++ G+ L+++L+D Y K + TDA R+F +I++K N V WNV++
Sbjct: 684 RREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMI 743
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ + + ++ ++ ++ ++ +F AL ACS + G QIH ++K+ +
Sbjct: 744 VGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLD 803
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V SL MY KCG + +A + ++ + W ++V+ Y + A ELF M
Sbjct: 804 NDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFM 863
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+++V+ D TL +++ C+ GK
Sbjct: 864 RQKSVLP-------------------------------DSFTLSNVISCCSMFGLYDYGK 892
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
VH + + S + +ALL +Y KCG A + F M + +D V+W ++++G +
Sbjct: 893 SVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSM-EEKDMVAWGSLISGLCKN 951
Query: 457 GQSEEAMTSFSEMQWET---RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
G+ +EA+ F +M+ + +P +++ ACA + +L G Q+H +I+ +NV
Sbjct: 952 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVF 1011
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+L+++Y+KC E A++VF +++ NSMI + N ++E+F LM +G
Sbjct: 1012 VGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQG 1071
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
I PD ++ +L+A ++ L + + GI +I +Y + G+ K
Sbjct: 1072 IFPDSVSITSVLVAISSTASL-LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 1130
Query: 634 EDFVNRM 640
E+ +M
Sbjct: 1131 ENIFKKM 1137
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 208/451 (46%), Gaps = 37/451 (8%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ S+ R++ ++V ++ + Y KCG + +A +F + ++ W
Sbjct: 781 CSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 840
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
NAM+ AY +N LELF M V + T +NV+ + K +H + K
Sbjct: 841 NAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFK 900
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
R +ES+L+ Y KC TDA +F ++ K+ V+W ++ G KEA+ +
Sbjct: 901 RPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 960
Query: 232 FFKMLRED--IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
F M +D ++P + + + AC+ L + G+Q+HG +IK + V SL ++Y
Sbjct: 961 FGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLY 1020
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
KCG E A + NI++W S++S Y+ + + ELFN M + +
Sbjct: 1021 SKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFP------ 1074
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
D V++ +L + + + GK +HG+ R S
Sbjct: 1075 -------------------------DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS 1109
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ + NAL+DMY KCG + A F +M Q + ++WN ++ GY G A++ F E+
Sbjct: 1110 DTHLKNALIDMYVKCGFSKYAENIFKKM-QHKSLITWNLMIYGYGSHGDCRTALSLFDEL 1168
Query: 470 Q--WETRPSKFTFETLLAACANISSLEQGKQ 498
+ ET P TF +L++AC + +E+GK
Sbjct: 1169 KKAGET-PDDVTFLSLISACNHSGFVEEGKN 1198
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 239/553 (43%), Gaps = 56/553 (10%)
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS---ANQITYANVLRSSAEELELGVSKQL 165
S N+ + A Q G + L L+ H G S + T+ ++L++ + L K +
Sbjct: 526 ASVNSGIRALIQKGEYLQALHLY--TKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTI 583
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG-- 223
HG I+ G+ + + +SLV+ Y KC + A ++FD + +V V ++ G
Sbjct: 584 HGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYF 643
Query: 224 ---NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP-----YEGMQIHGVIIKIDF 275
KE V F +ML +RP F+ + S L +G QIHG +++
Sbjct: 644 KFRRFKEGVGCFRRMLVLGVRPDAFSLS---IVVSVLCKEGNFRREDGKQIHGYMLRNSL 700
Query: 276 EGDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+GD + +L +MY K G DA R ++ D+ N++ W
Sbjct: 701 DGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLW--------------------- 739
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
N M+ G+ S + + +L+ L + + + + L C+
Sbjct: 740 ----------NVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAF 789
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G+++H + + ++ +VS +LL MY KCG + A F + +R ++ WNA++ Y
Sbjct: 790 GRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEI-WNAMVAAYV 848
Query: 455 RRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
A+ F M Q P FT +++ C+ + GK +H + + +
Sbjct: 849 ENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPA 908
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK--K 571
AL+ +Y+KC C A VFK D++ S+I G C N + +EAL+VFG MK
Sbjct: 909 IESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 968
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
+ +KPD ++ AC + LQ SM K G + + +I LY + G +
Sbjct: 969 DSLKPDSDIMTSVINACAGLEALSFGLQVHGSM-IKTGQVLNVFVGSSLIDLYSKCGLPE 1027
Query: 632 -ELEDFVNRMPFN 643
L+ F + P N
Sbjct: 1028 MALKVFTSMRPEN 1040
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 152/319 (47%), Gaps = 13/319 (4%)
Query: 32 GHLKSDE----PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECY 87
G +K D+ P S + + CA +A+ ++ +++ VF+ + I+ Y
Sbjct: 962 GDMKDDDDSLKPDS-DIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLY 1020
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KCG + A +F M + +WN+M+ Y++N P ++ELF M G+ + ++
Sbjct: 1021 SKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSIT 1080
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+VL + + L K LHG ++ G + L+++L+D Y KC A +F +Q+K
Sbjct: 1081 SVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 1140
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ ++WN+++ Y G+ + A+ +F ++ + P + TF + + AC+ EG
Sbjct: 1141 SLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFF 1200
Query: 268 GVIIKIDF--EGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG----Y 320
I+K D+ E ++ ++ + GRLE+A + P E + W ++S +
Sbjct: 1201 E-IMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHH 1259
Query: 321 AISGRIREARELFNEMPER 339
+ I A +L PER
Sbjct: 1260 NVELGILSAEKLLRMEPER 1278
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 424 CGNLRSARIWFYQMSQRR----------DKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
CG+ R + + RR S N+ + ++G+ +A+ +++ +
Sbjct: 496 CGDDADMRFKLHDVHIRRRLSRLADSYISPASVNSGIRALIQKGEYLQALHLYTKHDGSS 555
Query: 474 R--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
S FTF +LL AC+++++L GK IH +I + + +LV +Y KC L+YA
Sbjct: 556 PLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYA 615
Query: 532 IRVF-----KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
++VF S+ DV +CNSMI G+ R +E + F M G++PD + ++
Sbjct: 616 VQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVS 675
Query: 587 ACIHEGNVK 595
EGN +
Sbjct: 676 VLCKEGNFR 684
>gi|224146493|ref|XP_002326026.1| predicted protein [Populus trichocarpa]
gi|222862901|gb|EEF00408.1| predicted protein [Populus trichocarpa]
Length = 737
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 158/615 (25%), Positives = 285/615 (46%), Gaps = 70/615 (11%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
VF+ + +G+CG LD+A +F++MP++ +WN+M+ +GF + LF +
Sbjct: 148 VFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHHGFVEDCVVLFRKLVR 207
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S ++ ++ VL E +L Q+HGL++K G V++ +SL++ Y + M+
Sbjct: 208 KEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQ 267
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
++F+++ ++ V+WN I+ + + N +A+ +F KM + I P TF + + +C+
Sbjct: 268 VEKLFEEVDGRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTS 327
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L P G +HG I+K E D + +L + Y KCG+
Sbjct: 328 LLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGK---------------------- 365
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ A F E+ ++NV+SWN+++ GY + ++ + M K ++
Sbjct: 366 ---------LDNAHYCFREIHQKNVVSWNSLILGYANKCSFA-SVSLLLEMLKLGFRPNE 415
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIW--- 433
+ +L S + K++H R Y +N +V +L+ Y + G + A I+
Sbjct: 416 FSFSAVLKS----SLVLELKQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKA 471
Query: 434 ----------------------------FYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
F + D VSWN V+ AR G E
Sbjct: 472 SETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFEL 531
Query: 466 FSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVCRGALVEVYT 523
F M+ + P +T+ +LL + + +L G IH +I+ + ++V R L+++Y
Sbjct: 532 FKHMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYG 591
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
KC LE + ++F + ++I ++I N +EALE F M+ G +PD + F
Sbjct: 592 KCGNLESSAKIFDSMTERNLITWTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIA 651
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFN 643
+L AC H V+ +Q F M Y I P ++HY C++ L R G+++E E ++ MPF
Sbjct: 652 VLTACRHGALVREGMQLFGKMN-NYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFP 710
Query: 644 PTVPMLRKIFDKCRK 658
P + R + C+K
Sbjct: 711 PDAQIWRSFLEGCKK 725
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/564 (25%), Positives = 265/564 (46%), Gaps = 48/564 (8%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTFYPTP--PVFLLNRAIECYGKCGNLDDARGLFDEMP 104
L Q C+ +A+ + L + +T P P F+ N I Y + A +FD MP
Sbjct: 16 QLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMAHKVFDNMP 75
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
R+ S+N+++ +++ G+ F +M G N T + +L S +++G
Sbjct: 76 HRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLL--SCASMDVGRGIM 133
Query: 165 LHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
L L +K G FC +V + ++L+ +G+C + +A +F+D+ +K+ V+WN ++ G
Sbjct: 134 LQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHHG 193
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
++ VV+F K++R++ +F L G QIHG++IK + + +V
Sbjct: 194 FVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSN 253
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL MY + + + +LF E+ R+V++
Sbjct: 254 SLINMYAR-------------------------------RSSMSQVEKLFEEVDGRDVVT 282
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN +++ +++S +AL+ M + +Q T ++N C L G+ VHG I
Sbjct: 283 WNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIV 342
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ +++++ +AL+D Y KCG L +A F ++ Q ++ VSWN+++ GYA +
Sbjct: 343 KTALETDVYLGSALVDYYAKCGKLDNAHYCFREIHQ-KNVVSWNSLILGYANKCSFASVS 401
Query: 464 TSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
++ RP++F+F +L + S + + KQIH IR YE N +L+ Y
Sbjct: 402 LLLEMLKLGFRPNEFSFSAVLKS----SLVLELKQIHSLTIRLGYENNEYVLTSLITSYG 457
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR--EALEVFGLMKKEGIKPDHITF 581
+ + A+ K S +L ++ + I G +N G+ E L+ ++ +PD +++
Sbjct: 458 RNGLITDALIFVKASETLLAVVPANSIAGI-YNRSGQYFETLKFLSQLE----EPDTVSW 512
Query: 582 HGILLACIHEGNVKLALQFFDSMR 605
+ ++ AC GN + F MR
Sbjct: 513 NIVIAACARNGNYNEVFELFKHMR 536
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 205/492 (41%), Gaps = 70/492 (14%)
Query: 3 GNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEAR 62
G I+S S P K L + P + + + + C S +
Sbjct: 277 GRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMP-NQTTFVSVINSCTSLLVPMCGE 335
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
+ +V V+L + ++ Y KCG LD+A F E+ +++ SWN+++ Y N
Sbjct: 336 YVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGYA-NK 394
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
++ L L+M G N+ +++ VL+SS LEL KQ+H L ++ G+ N + +
Sbjct: 395 CSFASVSLLLEMLKLGFRPNEFSFSAVLKSSLV-LEL---KQIHSLTIRLGYENNEYVLT 450
Query: 183 SLVDAYGKCMVMTDAR--------------------------------RMFDDIQNKNAV 210
SL+ +YG+ ++TDA + ++ + V
Sbjct: 451 SLITSYGRNGLITDALIFVKASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTV 510
Query: 211 SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI 270
SWN+++ GN E +F M + P N+T+ + L S + + G IHG++
Sbjct: 511 SWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLL 570
Query: 271 IKIDFEGDDVVL-GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
IK +F D+V+ L +MY KCG LE +
Sbjct: 571 IKTNFSYFDIVVRNVLIDMYGKCGNLESSA------------------------------ 600
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
++F+ M ERN+I+W A+++ + +EAL+ M D+V +L C
Sbjct: 601 -KIFDSMTERNLITWTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHG 659
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ ++ G ++ G ++ ++ + L+D+ + G+L A M D W +
Sbjct: 660 ALVREGMQLFGKMNNYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSF 719
Query: 450 LTGYARRGQSEE 461
L G +R +E+
Sbjct: 720 LEGCKKRRNTED 731
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 277/549 (50%), Gaps = 36/549 (6%)
Query: 148 NVLRSSAEELELGVSKQLHG--LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ 205
+L+ SA+ L K +H +I + N++ +SL++ Y KC + AR +FD ++
Sbjct: 30 QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMR 89
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGM 264
+N VSW ++ Y G E + +F M+ D +RP + FA + +CS EG
Sbjct: 90 KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q HG +K G + YVK +++ Y+
Sbjct: 150 QCHGYALKS---------GLVFHQYVK----------------------NALICMYSRRS 178
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
++ A ++ E+P +V S+N ++ G + EAL+ + M D VT
Sbjct: 179 DVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFG 238
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+C+ L ++++G +VH + R + FVS+A++DMY KCGN+ +AR F ++ Q ++ V
Sbjct: 239 LCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL-QTKNVV 297
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
SW A+L Y++ G EEA+ F EM+ + P+++TF LL +CA IS+L GK +H +
Sbjct: 298 SWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRI 357
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
++ +E +++ AL+ +Y+K +E A +VF E D I ++MI G H+ GREAL
Sbjct: 358 KKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREAL 417
Query: 564 EVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKL 623
VF M P ++TF G+L AC H G+V+ + + + + GI P +EHY C++ L
Sbjct: 418 VVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGL 477
Query: 624 YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQF 683
C+ G + E E+F+ P V R + C + LG+ A + +++P +
Sbjct: 478 LCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTY 537
Query: 684 KITTNRFDR 692
+ +N + +
Sbjct: 538 ILLSNMYAK 546
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 235/482 (48%), Gaps = 44/482 (9%)
Query: 20 PTPSKTLTKTIS-GHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPP-- 76
PT L K+ + GH P+ +++ L ++ A +K + + + ++L+
Sbjct: 9 PTHKPFLLKSSTVGH-----PLEHTI--QLLKVSADTKNLKFGKMIHAHLIITNQATKDN 61
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-N 135
+ +N I Y KC + AR LFD M +R+ SW A++ Y NG L LF M +
Sbjct: 62 IVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMIS 121
Query: 136 HSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT 195
+ N+ +A ++ S ++ ++ Q HG +K G + ++++L+ Y + +
Sbjct: 122 VDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVK 181
Query: 196 DARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS 255
A ++ ++ + S+N+I+ L G EA+ + +M+ E I N T+ A CS
Sbjct: 182 GAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCS 241
Query: 256 FLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTS 315
L G+Q+H + + E D V ++ +MY KCG + +AR + ++ +N++SWT+
Sbjct: 242 HLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTA 301
Query: 316 IVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDID 375
I++ Y+ +G EA F EM ++ +
Sbjct: 302 ILAAYSQNGCFEEALNFFPEMEVDGLLP-------------------------------N 330
Query: 376 QVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFY 435
+ T ++LN CAG+S + GK +H I ++ + +I V NAL++MY K G++ +A F
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFL 390
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR-PSKFTFETLLAACANISSLE 494
+M RD ++W+A++ G + G EA+ F EM P TF +L+ACA++ S++
Sbjct: 391 EMIC-RDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQ 449
Query: 495 QG 496
+G
Sbjct: 450 EG 451
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 198/415 (47%), Gaps = 22/415 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y F LC+ K + ++ + F+ + I+ YGKCGN+ +AR +F+ +
Sbjct: 233 YVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQ 292
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
++ SW A+L AY+QNG L F +M G+ N+ T+A +L S A LG K
Sbjct: 293 TKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKL 352
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I K GF ++I+ ++L++ Y K + A ++F ++ +++++W+ ++ G
Sbjct: 353 LHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGL 412
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDFEGDDVVLG 283
G+EA+V+F +ML P TF L AC+ L S EG ++ ++ + E
Sbjct: 413 GREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYT 472
Query: 284 SLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAIS---GRIREARELFNEMPER 339
+ + K GRL++A + P + ++++W +++S + G ++ EL +M
Sbjct: 473 CIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPG 532
Query: 340 NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
+V ++ + Y ++ W + LMR+ + G S I++ +H
Sbjct: 533 DVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKE-----------PGASWIEIRNSIH 581
Query: 400 GFIHR---NDYSSNIFVS-NALLDMYRKCGNLRSARIWFYQM--SQRRDKVSWNA 448
F+ + S+ I+ LL M R G + F+ + Q+R+ VS+++
Sbjct: 582 VFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHS 636
>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 288/595 (48%), Gaps = 45/595 (7%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+L DA LFD MP ++ +W + + T+NG P + F DM SGV+ N +
Sbjct: 39 KSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNA 98
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKN 208
L + A+ L +Q+H L V+ GF G+ + SSLV+ Y +C + A+ +FD +++ +
Sbjct: 99 ALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPD 158
Query: 209 AVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-GMQIH 267
V + +V + +G + AV +MLR+ + P T A+ L +C P+ G Q+H
Sbjct: 159 VVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSC----CPFVLGEQVH 214
Query: 268 GVIIK-IDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
+IK + + S L + Y + + A+ + + +N+++W S++ + GR
Sbjct: 215 AYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGR 274
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+A ++F++M V+ N +F F + L
Sbjct: 275 PEDALQVFDDMISEGVVEPN----------------EFAF--------------SIALGA 304
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C I +G+++H + + +S++ VSNALL MY + +++ + + D VS
Sbjct: 305 CG---SIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDI-ENPDIVS 360
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVI 504
W ++ + G SE+A+ S + P+ + F + L++CA+++ L+QG+Q HC +
Sbjct: 361 WTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLAL 420
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ ++ + AL+ +Y+KC + A F DV NS+I G+ + AL+
Sbjct: 421 KLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQ 480
Query: 565 VFGLMKK-EGIKPDHITFHGILLACIHEGNVKLALQFFDSM--RCKYGIIPQLEHYECMI 621
VFG M+ G +PD +F G+L AC H G V + F ++ ++G P HY C++
Sbjct: 481 VFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVV 540
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+ R G + V MPF P + + + CR +G GE AA RL EL+
Sbjct: 541 DMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELS 595
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 43/418 (10%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
+E Y +CG+L A+G+FD M D + +++ A+ ++G ++ M GV N+
Sbjct: 135 VELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNE 194
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKR-GFCGNVILESS-LVDAYGKCMVMTDARRMF 201
T A++L S + + +Q+H ++K G + SS L+D Y + A+ +F
Sbjct: 195 HTMASILGSCCPFV---LGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVF 251
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSP 260
+++ KN V+W +++ ++ G ++A+ +F M+ E + P F F+ AL AC ++
Sbjct: 252 NNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACGSIAL- 310
Query: 261 YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGY 320
G Q+H IK + D V +L MY + +++ +L + +I+SWT+ +S
Sbjct: 311 --GRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISAN 368
Query: 321 AISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLG 380
+G F+E I+ +ML ++R L+ D+ F
Sbjct: 369 FQNG--------FSE----KAIALLSML--HSRGLMPN---DYAF--------------S 397
Query: 381 LILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR 440
L+ CA L+ + G++ H + I NAL+++Y KCG + A++ F M
Sbjct: 398 SALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDH- 456
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRPSKFTFETLLAACANISSLEQG 496
RD SWN+++ GYA+ G + A+ F EM+ T P + +F +LAAC + + +G
Sbjct: 457 RDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEG 514
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 210/469 (44%), Gaps = 43/469 (9%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
HG +R V+ + +D K + DA +FD + KN V+W V G
Sbjct: 15 HGRPRRRVEPPEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRP 74
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
+ A+ F M+ + P +F F AL AC+ S+ G Q+H + ++ F GD V SL
Sbjct: 75 EAAMAAFADMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSL 134
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
E+Y +CG L A+G+ D+ + +++ +TS+VS + SG A + ++M + V
Sbjct: 135 VELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGV---- 190
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR- 404
+ ++ T+ IL C +G++VH ++ +
Sbjct: 191 ---------------------------EPNEHTMASILGSCC---PFVLGEQVHAYMIKA 220
Query: 405 -NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+S +++ S+AL+D Y + A+ F + ++ V+W +++ + R G+ E+A+
Sbjct: 221 MGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNL-HCKNVVTWCSMMQLHIRDGRPEDAL 279
Query: 464 TSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F +M E P++F F L AC +I+ G+Q+H I+ ++ AL+ +
Sbjct: 280 QVFDDMISEGVVEPNEFAFSIALGACGSIA---LGRQLHSSAIKRNLTSDLRVSNALLSM 336
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y + C ++ V K+ + D++ + I N +A+ + ++ G+ P+ F
Sbjct: 337 YGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAF 396
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
L +C + QF + K G ++ +I LY + G +
Sbjct: 397 SSALSSCADLALLDQGRQFH-CLALKLGCDLKICTGNALINLYSKCGQI 444
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 156/361 (43%), Gaps = 23/361 (6%)
Query: 57 AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLG 116
+I R+L S+ + T + + N + YG+ ++ + + ++ D SW +
Sbjct: 307 SIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAIS 366
Query: 117 AYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCG 176
A QNGF + + L ++ G+ N +++ L S A+ L +Q H L +K G
Sbjct: 367 ANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDL 426
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+ ++L++ Y KC + A+ FD + +++ SWN ++ Y G+ A+ +F +M
Sbjct: 427 KICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMR 486
Query: 237 R-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKC 292
P +F L AC+ EG+ + I G + +M +
Sbjct: 487 SIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRS 546
Query: 293 GRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIRE---ARELFNEMPE----RNVISW 344
GR +DA L+++ P + W ++++ + G + A E E+ E R+ S+
Sbjct: 547 GRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASY 606
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M + W++A + + +D+ + AG S +++ EVH F+ R
Sbjct: 607 VLMSGIHAMRGEWRDAY-------RVRRRMDEAG----VRKEAGCSWVEVHNEVHTFVAR 655
Query: 405 N 405
+
Sbjct: 656 D 656
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 283/619 (45%), Gaps = 101/619 (16%)
Query: 69 VTFYPT---PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
V F P+ P V N I + GN++ AR FD MP R S+NA++ Y +N P
Sbjct: 6 VRFLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPD 65
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILE---- 181
L LF M + S L G+S + H L ++ L
Sbjct: 66 AALGLFHRMPSRDLG------------SYNALIAGLSLRRHTLPDAAAALASIPLPPSVV 113
Query: 182 --SSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+SL+ Y + ++ DA R+F + +N V++ V++ +L AG EA +F +M +D
Sbjct: 114 SFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKD 173
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDAR 299
+ V ++ Y + GR+ +AR
Sbjct: 174 V---------------------------------------VARTAMLSGYCQAGRITEAR 194
Query: 300 GLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKE 359
L D+ +RN++SWT+++SGYA +G++ AR+LF MP+RN +SW AML GY ++ ++
Sbjct: 195 ALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVED 254
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
A D M + NA++
Sbjct: 255 AEDLFNAMPDHP---------------------------------------VAACNAMMV 275
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKF 478
+ + G + +A+ F +M R D +W+A++ Y + EA+++F EM RP+
Sbjct: 276 GFGQHGMVDAAKAMFERMCARDDG-TWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYT 334
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
+F ++L CA +++ + G+++H ++R ++ +V AL+ +Y KC L+ A RVF
Sbjct: 335 SFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMF 394
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
DV++ NSMI G+ + G EAL +F ++ + PD IT+ G+L AC + G VK
Sbjct: 395 EPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGR 454
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
+ F+SM I HY CM+ L R G + E D +N MP P + + CR
Sbjct: 455 EIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRM 514
Query: 659 NGYATLGEWAARRLNELNP 677
+ A + E AA++L EL P
Sbjct: 515 HKNAEIAEVAAKKLLELEP 533
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 186/434 (42%), Gaps = 59/434 (13%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
EARKL + P V + Y + G + +AR LFDEMP+R+ SW AM+ Y
Sbjct: 161 EARKLFDEM----PDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYA 216
Query: 120 QNG---FPGRTLELFLDMNHSGVSANQITYANVLR-SSAEELELGVSKQLHGLIVKRGFC 175
QNG + E+ D N +A + Y AE+L +
Sbjct: 217 QNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDH----------- 265
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
V ++++ +G+ ++ A+ MF+ + ++ +W+ +++ Y EA+ F +M
Sbjct: 266 -PVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREM 324
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
L IRP +F + L C+ L++ G ++H +++ F+ D + +L MY+KCG L
Sbjct: 325 LCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNL 384
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ A+ + + + ++++ W S+++GYA G EA +F++
Sbjct: 385 DKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDD-------------------- 424
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
+R D +T +L C+ ++K G+E+ + N S+I +
Sbjct: 425 -----------LRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMN---SSIRLGA 470
Query: 416 A----LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW 471
A ++D+ + G + A M D + W A L G R ++ E ++
Sbjct: 471 AHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGA-LMGACRMHKNAEIAEVAAKKLL 529
Query: 472 ETRPSKFTFETLLA 485
E P LL+
Sbjct: 530 ELEPGSAGPYVLLS 543
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 34/349 (9%)
Query: 67 NLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGR 126
+L P PV N + +G+ G +D A+ +F+ M RD G+W+AM+ Y QN F
Sbjct: 257 DLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLME 316
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
L F +M G+ N ++ ++L A ++LH +++ F +V S+L+
Sbjct: 317 ALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALIT 376
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFT 246
Y KC + A+R+F+ + K+ V WN ++ Y G G+EA+ +F + + P T
Sbjct: 377 MYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGIT 436
Query: 247 FANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-----LTEMYVKCGRLEDARGL 301
+ L ACS+ EG +I + + LG+ + ++ + G +++A L
Sbjct: 437 YIGVLTACSYTGKVKEGREIFNSMGM----NSSIRLGAAHYSCMVDLLGRAGLVDEALDL 492
Query: 302 LDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG--------YT 352
++ P E + I W +++ + R+ + E+ E+ + ++ AG YT
Sbjct: 493 INNMPVEPDAIIWGALMG----ACRMHKNAEI-AEVAAKKLLELEPGSAGPYVLLSHIYT 547
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
+ W++A D MRK + LN G S I+ K VH F
Sbjct: 548 STGRWEDASD----MRKFISSRN-------LNKSPGCSWIEYNKMVHLF 585
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
+Y+ + + +CA+ R+L + ++ VF ++ I Y KCGNLD A+ +F
Sbjct: 332 NYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVF 391
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
+ +D WN+M+ Y Q+G L +F D+ + ++ + ITY VL + + G
Sbjct: 392 NMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYT---G 448
Query: 161 VSKQLHGLIVKRGFCGNVILESS----LVDAYGKCMVMTDARRMFDDIQ-NKNAVSWNVI 215
K+ + G ++ L ++ +VD G+ ++ +A + +++ +A+ W +
Sbjct: 449 KVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGAL 508
Query: 216 VRRYLVAGNGKEAVVMFFKML 236
+ + N + A V K+L
Sbjct: 509 MGACRMHKNAEIAEVAAKKLL 529
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 183/683 (26%), Positives = 306/683 (44%), Gaps = 50/683 (7%)
Query: 18 PKPTPSKTLTKTISGHLKSDEP---VSYSLYA-----HLFQLCASSKAIVEARKLESNLV 69
P PT S+ + +S +P V+ L+A L + S N+
Sbjct: 3 PSPTTSQLILLPVSLGSALPQPREMVALHLHAKQPTPRLLPVPPSHARTRTPTAAAVNVS 62
Query: 70 TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLE 129
P P V L + ++ K G L DA LFD MP ++ +W + T+NG P
Sbjct: 63 HAAPPPDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAAT 122
Query: 130 LFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+F DM SGV+ N L + A LG+ +Q+H L V+ GF + + S L++ Y
Sbjct: 123 MFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYS 182
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
+C + A +F ++ + V + +V G AV + +M R+ ++P T +
Sbjct: 183 RCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTS 242
Query: 250 ALFACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L C P G QIHG ++K+ +L + Y + G A+ + + + +
Sbjct: 243 MLAEC-----PRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESK 297
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
N++SW S++ GR+ +A +F+EM V + +F F
Sbjct: 298 NVVSWCSMMQLCIRDGRLDDALRVFSEMISEGV-----------------QPNEFAF--- 337
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLR 428
+ L +VC +G+++H + D ++I VSNALL MY + G +
Sbjct: 338 -------SIALSACGSVC-------LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVS 383
Query: 429 SARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAAC 487
++ + D VSW A ++ + G SE+A+ +M E P+ + F + L++C
Sbjct: 384 ELEAVLGKI-ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSC 442
Query: 488 ANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICN 547
A+++ L QG+Q+HC ++ + V AL+ +Y+KC + A F + DV+ N
Sbjct: 443 ADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWN 502
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
S+I G + ALE F M +PD TF +L+ C H G VK FF M +
Sbjct: 503 SLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDR 562
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
YG+ P HY CMI + R G E + MPF P V + + + C+ + +G+
Sbjct: 563 YGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKL 622
Query: 668 AARRLNELNPWAPFQFKITTNRF 690
AA +L EL+ + + +N +
Sbjct: 623 AADKLMELSERDSASYVLMSNLY 645
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 253/495 (51%), Gaps = 48/495 (9%)
Query: 198 RRMFDDIQNKNAV-SWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
R MF +K +V SWN I+ + +G+ +A+ F M + + P TF + +CS
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L G QIH + D V +L +MY KCG L DA
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDA------------------ 140
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF----LMRKTTK 372
R+LF+E+PERNV+SW +M++GY ++ +EA+ F+F L+ +T
Sbjct: 141 -------------RKLFDEIPERNVVSWTSMISGYVQNERAREAV-FLFKEFLLVDETDY 186
Query: 373 D--------IDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
D +D V LG +++ CA + + + VHG + + + V N L+D Y KC
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFET 482
G + +R F M + D SWN+++ YA+ G S EA + FS+M + E R + T
Sbjct: 247 GEISVSRKVFDGM-EETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSA 305
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
+L ACA+ +L+ GK IH V++ E N+V ++V++Y KC +E A + F +
Sbjct: 306 VLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKN 365
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
V M+ G+ + G+EA++VF M + GIKP++ITF +L AC H G +K +F+
Sbjct: 366 VKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFN 425
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
M+C++ + P +EHY CM+ L R GY+KE + M P + + CR +
Sbjct: 426 KMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNV 485
Query: 663 TLGEWAARRLNELNP 677
LGE +AR+L +L+P
Sbjct: 486 ELGEISARKLFKLDP 500
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 232/500 (46%), Gaps = 76/500 (15%)
Query: 110 SWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
SWN+++ + ++G + L F M + N+ T+ ++S + +L KQ+H
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
G+ ++ + S+L+D Y KC + DAR++FD+I +N VSW ++ Y+ +EAV
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172
Query: 230 VMFFKMLRED------IRPLNFTFANALFACSFLSSPYEGMQ-----IHGVIIKIDFEGD 278
+F + L D I + + L C + ++ +HG+ +K FEG
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGC 232
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V +L + Y KCG + +R + D +E ++ SW S+++ YA +G EA LF++M +
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
R + +NA VTL +L CA +++GK +
Sbjct: 293 RGEVRYNA------------------------------VTLSAVLLACAHSGALQIGKCI 322
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + + + N+ V +++DMY KCG + AR F ++ +R++ SW ++ GY G
Sbjct: 323 HDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRL-KRKNVKSWTVMVAGYGMHGH 381
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EAM F EM + +P+ TF ++LAAC++ L++G H F C
Sbjct: 382 GKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG--WHWFNKMKC---------- 429
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
E+ + E S C +LG R E +GL+++ +KPD
Sbjct: 430 -----------EFDVEPGIEHYS-----CMVDLLG-----RAGYLKEAYGLIQEMKVKPD 468
Query: 578 HITFHGILLACIHEGNVKLA 597
I + +L AC NV+L
Sbjct: 469 FIVWGSLLGACRIHKNVELG 488
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 180/342 (52%), Gaps = 23/342 (6%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+S P + + L+ LCA +++ F +F+ + I+ Y KCG L+
Sbjct: 86 RSTFPCTIKSCSSLYDLCA-------GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLN 138
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL-----------DMNHSGVSANQ 143
DAR LFDE+PER+ SW +M+ Y QN + LF ++ GV +
Sbjct: 139 DARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDS 198
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ V+ + A V++ +HGL VK+GF G + + ++L+DAY KC ++ +R++FD
Sbjct: 199 VLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDG 258
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML-REDIRPLNFTFANALFACSFLSSPYE 262
++ + SWN ++ Y G EA +F M+ R ++R T + L AC+ +
Sbjct: 259 MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G IH ++K++ E + VV S+ +MY KCGR+E AR D+ +N+ SWT +V+GY +
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGM 378
Query: 323 SGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKEA 360
G +EA ++F EM + N I++ ++LA + + L KE
Sbjct: 379 HGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG 420
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 136/264 (51%), Gaps = 7/264 (2%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
N ++ Y KCG + +R +FD M E D SWN+++ Y QNG LF DM G V
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
N +T + VL + A L + K +H +VK N+++ +S+VD Y KC + AR+
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
FD ++ KN SW V+V Y + G+GKEA+ +F++M+R I+P TF + L ACS
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 260 PYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER-NIISWTSIV 317
EG + + + D E + ++ + G L++A GL+ + + + I W S++
Sbjct: 417 LKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
Query: 318 SGYAISGRIR----EARELFNEMP 337
I + AR+LF P
Sbjct: 477 GACRIHKNVELGEISARKLFKLDP 500
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/542 (28%), Positives = 256/542 (47%), Gaps = 66/542 (12%)
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
++F +++ NA + N +++ L G ++ M P +T AC+
Sbjct: 64 QLFGLVRSPNAFTCNTLLKAALRQGFPHLCFPLYASM---PAAPDTYTHPLLAAACAARG 120
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
EG+Q+H +K F + + +L MY CG + AR + D + +SW +I++
Sbjct: 121 DVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILA 180
Query: 319 GYAISGRIREARELFNEMPER-------------------------------NVISWNAM 347
Y G + +A ++F MPER + +W AM
Sbjct: 181 TYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAM 240
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
++ + R+ L+ EAL MR+ +D+ + ++ CA I+ G+ HG + R
Sbjct: 241 VSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGL 300
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWF------------------------------YQM 437
S + V N L+ MY C ++ +AR F + +
Sbjct: 301 GSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDV 360
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+D VSW+A++ G QS EA+ F M+ E +P T ++++AC+N+S+LEQG
Sbjct: 361 MPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQG 420
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K +H ++ + Y I +V +L+++Y KC C+E A+ VF N++I+G N
Sbjct: 421 KLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMN 480
Query: 557 ERGREALEVFGLMKKEGIK-PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+L++F M+ G P+ ITF G+L AC H G V+ QFF M+ KY I+P +
Sbjct: 481 GLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIR 540
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY CM+ L R GY++E ED + MP +P VP + C K+G + +GE ++L +L
Sbjct: 541 HYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKL 600
Query: 676 NP 677
+P
Sbjct: 601 DP 602
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 256/559 (45%), Gaps = 50/559 (8%)
Query: 34 LKSDEPVSYSLYAH--LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG 91
L + P + Y H L CA+ + E ++ S+ V + ++L N + Y CG
Sbjct: 96 LYASMPAAPDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACG 155
Query: 92 NLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR 151
+ AR +FD P D SWN +L Y ++G + +++F M
Sbjct: 156 CVASARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVKVFTRM----------------- 198
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
E + L +RG ++ +AR +FD ++++A +
Sbjct: 199 ---PERSAAAVSAMVALFARRG-------------------MVEEARGVFDGAEHRDAFT 236
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVI 270
W +V + EA+ +F M RE+ P++ + + AC+ G HG++
Sbjct: 237 WTAMVSCFERNDLFMEALAVFSDM-REEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLV 295
Query: 271 IKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
++ V L MY C + AR L D + + SW S++SGY +GR+ +A+
Sbjct: 296 VRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAK 355
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
LF+ MP+++ +SW+AM+AG + EAL+ MR D VTL +++ C+ LS
Sbjct: 356 ALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLS 415
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVL 450
++ GK VH +I + Y+ I + +L+DMY KCG + +A + + M + + WNAV+
Sbjct: 416 ALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAA-LEVFDMLEEKGTPCWNAVI 474
Query: 451 TGYARRGQSEEAMTSFSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
G A G ++ FSEM+ P++ TF +L+AC + +E+G+Q +++N Y
Sbjct: 475 VGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFF-KLMQNKY 533
Query: 509 EI--NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVF 566
+I N+ G +V++ + + A + + + +LG C E E
Sbjct: 534 QIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERV 593
Query: 567 GLMKKEGIKPDHITFHGIL 585
G K + PDH F +L
Sbjct: 594 G-KKLVKLDPDHDGFQTML 611
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 269/551 (48%), Gaps = 62/551 (11%)
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y ++ D+ R+F+ + A++W ++R Y G +++ F ML + P + F
Sbjct: 52 YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLED-------ARG 300
+ L AC+ L G +HG II++ + D +L MY K L+ A
Sbjct: 112 PSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQ 171
Query: 301 LLDQPDERN-IISWTSIVSG-------------YAISGRIRE------------------ 328
+LD+ ER + S++ G Y +S R RE
Sbjct: 172 VLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYRE 231
Query: 329 ---------------------ARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLM 367
R++F MPE++++SWN ++AG R+ L+ E L V M
Sbjct: 232 MEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREM 291
Query: 368 RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
D TL +L + A +I GKE+HG R + ++V+++L+DMY KC +
Sbjct: 292 GGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRV 351
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAA 486
+ F +++R D +SWN+++ G + G +E + F +M + +P ++F +++ A
Sbjct: 352 VDSYRVFTLLTER-DGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPA 410
Query: 487 CANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
CA++++L GKQ+H ++ RN ++ N+ +LV++Y KC + A ++F D++
Sbjct: 411 CAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSW 470
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
+MI+G + +A+E+F MK EGI+P+++ F +L AC H G V A ++F+SM
Sbjct: 471 TAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTL 530
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+GI P +EHY + L R G ++E DF+ MP PT + + CR + + E
Sbjct: 531 DFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAE 590
Query: 667 WAARRLNELNP 677
A R+ E++P
Sbjct: 591 KVANRILEVDP 601
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 162/288 (56%), Gaps = 4/288 (1%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
L + I+ ++D R +F+ MPE+D SWN ++ +NG G TL + +M + +
Sbjct: 237 LGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANL 296
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+ T ++VL AE +++ K++HG +++G V + SSL+D Y KC + D+ R
Sbjct: 297 KPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYR 356
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F + ++ +SWN I+ + G E + F +ML I+P +++F++ + AC+ L++
Sbjct: 357 VFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTT 416
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+ G Q+HG I + F+ + + SL +MY KCG + AR + D+ R+++SWT+++ G
Sbjct: 417 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMG 476
Query: 320 YAISGRIREARELFNEMP----ERNVISWNAMLAGYTRSLLWKEALDF 363
A+ G +A ELF +M E N +++ A+L + + L EA +
Sbjct: 477 CALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKY 524
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 166/339 (48%), Gaps = 8/339 (2%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P S++L + + L A + I + +++ + V++ + I+ Y KC + D+
Sbjct: 297 KPDSFTL-SSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSY 355
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F + ERDG SWN+++ QNG L+ F M + + ++++++ + A
Sbjct: 356 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLT 415
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + KQLHG I + GF N+ + SSLVD Y KC + AR++FD ++ ++ VSW ++
Sbjct: 416 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIM 475
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G+ +A+ +F +M E I P F L ACS E + + +DF
Sbjct: 476 GCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNS-MTLDFGI 534
Query: 278 DDVV--LGSLTEMYVKCGRLEDARGLL-DQPDERNIISWTSIVSGYAISGRIREARELFN 334
V +++++ + GRLE+A + P W +++S + + A ++ N
Sbjct: 535 APGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVAN 594
Query: 335 ---EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
E+ +N ++ + Y+ + WKEA + +R+T
Sbjct: 595 RILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRT 633
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 254/518 (49%), Gaps = 35/518 (6%)
Query: 163 KQLHGLIVKRGFC-GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
+QLH ++ N L + L Y C +M+ A +FD I KN+ WN ++R Y
Sbjct: 79 QQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYAS 138
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G +++V++ +ML R NFT+ L AC L G ++H ++ E D V
Sbjct: 139 NGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYV 198
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
SL MY K G + AR +F+ M ER++
Sbjct: 199 GNSLLAMYAKFGDMG-------------------------------TARMVFDRMAERDL 227
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
SWN M++GY ++ A LM K D TL +L+ CA L +K GK +HG+
Sbjct: 228 TSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGY 287
Query: 402 IHRNDYSS-NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
RN + N F +N+L++MY C + AR F ++ + +D VSWN+++ GYAR G +
Sbjct: 288 AVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERV-RWKDTVSWNSMILGYARNGDAF 346
Query: 461 EAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
E++ F M + + P + TF +L AC I++L G IH ++++ ++ N + ALV
Sbjct: 347 ESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALV 406
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
++Y+KC L + RVF E ++ ++M+ G+ + RGREA+ + MK + PD+
Sbjct: 407 DMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNG 466
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
F IL AC H G V + F M +Y + P L HY CM+ L R G++ E +
Sbjct: 467 VFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRT 526
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
M PT + + R + L E +A+++ ++NP
Sbjct: 527 MEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNP 564
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 218/455 (47%), Gaps = 35/455 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIEC-YGKCGNLDDARGLFDEMPER 106
L Q ++K+ + ++L +++++F LN + Y CG + A +FD + +
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 107 DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+ WN M+ Y NG P ++L L+ +M G A+ TY VL++ + L + + +++H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
+V G ++ + +SL+ Y K M AR +FD + ++ SWN ++ Y +
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG-DDVVLGSL 285
A ++F M + + T L AC+ L + EG IHG ++ + SL
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
EMY C + DAR L ++ ++ +SW S++ GYA +G E+ LF M
Sbjct: 305 IEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRM--------- 355
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
ALD DQVT +L C ++ ++ G +H ++ +
Sbjct: 356 --------------ALD--------GSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK 393
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ +N V AL+DMY KCG+L +R F +M + VSW+A++ GY G+ EA++
Sbjct: 394 GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPD-KSLVSWSAMVAGYGLHGRGREAISI 452
Query: 466 FSEMQWETR-PSKFTFETLLAACANISSLEQGKQI 499
M+ + P F ++L+AC++ + +GK+I
Sbjct: 453 LDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 194/411 (47%), Gaps = 35/411 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + R++ S +V +++ N + Y K G++ AR +FD M
Sbjct: 164 YPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMA 223
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SWN M+ Y +N G +F M +G+ A+ T +L + A+ + K
Sbjct: 224 ERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKV 283
Query: 165 LHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+HG V+ N +SL++ Y C M DARR+F+ ++ K+ VSWN ++ Y G
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ E++ +F +M + P TF L AC +++ GM IH ++K F+ + +V
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
+L +MY KCG L +R + D+ +++++SW+++V+GY + GR REA + + M +VI
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIP 463
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
N + IL+ C+ + GKE+ +
Sbjct: 464 DNGVFTS-------------------------------ILSACSHAGLVVEGKEIF-YKM 491
Query: 404 RNDYSSNIFVSN--ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+Y+ +S+ ++D+ + G+L A + M + W A+LT
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,776,253,268
Number of Sequences: 23463169
Number of extensions: 448911855
Number of successful extensions: 1423766
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7929
Number of HSP's successfully gapped in prelim test: 2904
Number of HSP's that attempted gapping in prelim test: 1185726
Number of HSP's gapped (non-prelim): 75193
length of query: 693
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 543
effective length of database: 8,839,720,017
effective search space: 4799967969231
effective search space used: 4799967969231
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 81 (35.8 bits)