BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043637
(693 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/670 (54%), Positives = 486/670 (72%), Gaps = 5/670 (0%)
Query: 3 GNAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEAR 62
G T+ + IL + ++K +S S EPVSY LY LF+ C+S +V+AR
Sbjct: 27 GTKLTVTRQIL-----EHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQAR 81
Query: 63 KLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
K++S+LVTF P PP+FLLNRAIE YGKCG +DDAR LF+EMPERDGGSWNA++ A QNG
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNG 141
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+F MN GV A + ++A VL+S L+L + +QLH +VK G+ GNV LE+
Sbjct: 142 VSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLET 201
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
S+VD YGKC VM+DARR+FD+I N + VSWNVIVRRYL G EAVVMFFKML ++RP
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
LN T ++ + ACS + G IH + +K+ D VV S+ +MYVKC RLE AR +
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
DQ +++ SWTS +SGYA+SG REARELF+ MPERN++SWNAML GY + W EALD
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD 381
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
F+ LMR+ ++ID VTL ILNVC+G+S+++MGK+ HGFI+R+ Y +N+ V+NALLDMY
Sbjct: 382 FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYG 441
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFET 482
KCG L+SA IWF QMS+ RD+VSWNA+LTG AR G+SE+A++ F MQ E +PSK+T T
Sbjct: 442 KCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLAT 501
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLD 542
LLA CANI +L GK IH F+IR+ Y+I+VV RGA+V++Y+KC C +YAI VFKE+++ D
Sbjct: 502 LLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD 561
Query: 543 VIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFD 602
+I+ NS+I G C N R +E E+F L++ EG+KPDH+TF GIL ACI EG+V+L Q+F
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 603 SMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYA 662
SM KY I PQ+EHY+CMI+LYC+YG + +LE+F+ MPF+P + ML +I D C++ ++
Sbjct: 622 SMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWS 681
Query: 663 TLGEWAARRL 672
LG WAA+RL
Sbjct: 682 KLGAWAAKRL 691
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 329 bits (844), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 330/654 (50%), Gaps = 20/654 (3%)
Query: 56 KAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG--SWNA 113
K I + + + L++F + L + I Y G L A L P D G WN+
Sbjct: 39 KTISQVKLIHQKLLSF-GILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRG 173
++ +Y NG + L LF M+ + + T+ V ++ E + + H L + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 174 FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
F NV + ++LV Y +C ++DAR++FD++ + VSWN I+ Y G K A+ MF
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 234 KMLRE-DIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
+M E RP N T N L C+ L + G Q+H + + + V L +MY KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPER----NVISWNAML 348
G +++A + ++++SW ++V+GY+ GR +A LF +M E +V++W+A +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 349 AGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF------- 401
+GY + L EAL M + ++VTL +L+ CA + + GKE+H +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR-RDKVSWNAVLTGYARRGQSE 460
+ +N + V N L+DMY KC + +AR F +S + RD V+W ++ GY++ G +
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 461 EAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYE-INVVCRG 516
+A+ SEM +TRP+ FT L ACA++++L GKQIH + +RN + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
L+++Y KC + A VF + + + S++ G+ + G EAL +F M++ G K
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDF 636
D +T +L AC H G + +++F+ M+ +G+ P EHY C++ L R G +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 637 VNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ MP P + CR +G LGE+AA ++ EL + + +N +
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 191/462 (41%), Gaps = 89/462 (19%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
CAS ++L VT +F+ N ++ Y KCG +D+A +F M +D SW
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNH----------------------------------- 136
NAM+ Y+Q G + LF M
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIV-------KRGFCGNVILESSLVDAYG 189
SG+ N++T +VL A L K++H + K G ++ + L+D Y
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 190 KCMVMTDARRMFDDI--QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED--IRPLNF 245
KC + AR MFD + + ++ V+W V++ Y G+ +A+ + +M ED RP F
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS-LTEMYVKCGRLEDARGLLDQ 304
T + AL AC+ L++ G QIH ++ + + + L +MY KCG + DAR + D
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+N ++WTS+++GY + G EA +F+E
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDE----------------------------- 569
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA------LL 418
MR+ +D VTL ++L C+ I G E + N + VS L+
Sbjct: 570 --MRRIGFKLDGVTLLVVLYACSHSGMIDQGME-----YFNRMKTVFGVSPGPEHYACLV 622
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
D+ + G L +A +M V W A L+ G+ E
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 188/636 (29%), Positives = 319/636 (50%), Gaps = 33/636 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y L C+SS+++ + RK+ +++ L N + YGKCG+L DAR +FD MP
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ S+ +++ Y+QNG + L+L M + +Q + +++++ A ++G+ KQ
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH ++K ++I +++L+ Y + M+DA R+F I K+ +SW+ I+ + G
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 225 GKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
EA+ +ML + P + F ++L ACS L P G QIHG+ IK + G+ +
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY +CG L AR +F+++ + S
Sbjct: 310 SLCDMYARCGFL-------------------------------NSARRVFDQIERPDTAS 338
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WN ++AG + EA+ MR + D ++L +L + G ++H +I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + +++ V N+LL MY C +L F D VSWN +LT + Q E +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 464 TSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M E P T LL C ISSL+ G Q+HC+ ++ + L+++Y
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC L A R+F + DV+ +++I+G+ + G EAL +F MK GI+P+H+TF
Sbjct: 519 AKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFV 578
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
G+L AC H G V+ L+ + +M+ ++GI P EH C++ L R G + E E F++ M
Sbjct: 579 GVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW 678
P V + + + C+ G L + AA + +++P+
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 240/498 (48%), Gaps = 34/498 (6%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
TY +++ + + L +++H I+ + IL + ++ YGKC + DAR +FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+N VS+ ++ Y G G EA+ ++ KML+ED+ P F F + + AC+ S G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+H +IK++ + +L MYV+ ++ DA + +++ISW+SI++G++ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
EA EM V N +++F G L
Sbjct: 249 FEFEALSHLKEMLSFGVFHPN----------------EYIF--------------GSSLK 278
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
C+ L G ++HG +++ + N +L DMY +CG L SAR F Q+ +R D
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI-ERPDTA 337
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFV 503
SWN ++ G A G ++EA++ FS+M+ P + +LL A +L QG QIH ++
Sbjct: 338 SWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI 397
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREA 562
I+ + ++ +L+ +YT C L +F++ ++ D + N+++ +E+ E
Sbjct: 398 IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
L +F LM +PDHIT +L C+ ++KL Q K G+ P+ +I
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLID 516
Query: 623 LYCRYGYMKELEDFVNRM 640
+Y + G + + + M
Sbjct: 517 MYAKCGSLGQARRIFDSM 534
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 4/247 (1%)
Query: 345 NAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
N + +S ++EAL+ F F + ++ I T ++ C+ + G+++H I
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
++ + ++N +L MY KCG+LR AR F M + R+ VS+ +V+TGY++ GQ EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAI 153
Query: 464 TSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
+ +M Q + P +F F +++ ACA+ S + GKQ+H VI+ +++ + AL+ +Y
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI-KPDHITF 581
+ + A RVF D+I +S+I GF EAL M G+ P+ F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 582 HGILLAC 588
L AC
Sbjct: 274 GSSLKAC 280
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 315 bits (807), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 322/617 (52%), Gaps = 35/617 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ + + Y KC ++ A +F+ + E++ WNAM+ Y NG + +ELF+DM
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG + + T+ ++L + A +L + Q H +I+K+ N+ + ++LVD Y KC + D
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
AR++F+ + +++ V+WN I+ Y+ N EA +F +M I A+ L AC+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ Y+G Q+H + +K + D SL +MY KC
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC------------------------ 577
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
G I++AR++F+ +PE +V+S NA++AGY+++ L +EA+ M + +
Sbjct: 578 -------GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSE 629
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVSNALLDMYRKCGNLRSARIWFY 435
+T I+ C + +G + HG I + +SS ++ +LL MY + A F
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLE 494
++S + V W +++G+++ G EEA+ + EM+ + P + TF T+L C+ +SSL
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 495 QGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGF 553
+G+ IH + ++++ + L+++Y KC ++ + +VF E +V+ NS+I G+
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N +AL++F M++ I PD ITF G+L AC H G V + F+ M +YGI +
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
++H CM+ L R+GY++E +DF+ P + + CR +G GE +A +L
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Query: 674 ELNPWAPFQFKITTNRF 690
EL P + + +N +
Sbjct: 930 ELEPQNSSAYVLLSNIY 946
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 265/558 (47%), Gaps = 39/558 (6%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N ++ Y KC + A FD + E+D +WN+ML Y+ G PG+ L F+ + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
+ N+ T++ VL + A E + +Q+H ++K G N +LVD Y KC ++DAR
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLS 258
R+F+ I + N V W + Y+ AG +EAV++F +M E RP + F + L
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVL---------------------GSLTEMYVKCGRLED 297
+ + G + D +V++ S+ G +
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 298 ARGLLDQPD--------------ERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
A G++ D NI +S+VS Y+ ++ A ++F + E+N +
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAM+ GY + + ++ M+ + +ID T +L+ CA +++MG + H I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
+ + N+FV NAL+DMY KCG L AR F +M RD V+WN ++ Y + EA
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAF 514
Query: 464 TSFSEMQWETRPSKFT-FETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F M S + L AC ++ L QGKQ+HC ++ + ++ +L+++Y
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC ++ A +VF V+ N++I G+ N EA+ +F M G+ P ITF
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFA 633
Query: 583 GILLACIHEGNVKLALQF 600
I+ AC ++ L QF
Sbjct: 634 TIVEACHKPESLTLGTQF 651
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 228/458 (49%), Gaps = 35/458 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L CA+S + + S ++ +F+ N ++ Y KCG L+DAR +F+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+RD +WN ++G+Y Q+ +LF MN G+ ++ A+ L++ L KQ
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
+H L VK G ++ SSL+D Y KC ++ DAR++F + + VS N ++ Y N
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNN 609
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG- 283
+EAVV+F +ML + P TFA + AC S G Q HG I K F + LG
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 284 SLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SL MY+ + +A L + ++I+ WT ++SG++ +G EA + + EM V+
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
DQ T +L VC+ LS ++ G+ +H I
Sbjct: 730 P-------------------------------DQATFVTVLRVCSVLSSLREGRAIHSLI 758
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ + SN L+DMY KCG+++ + F +M +R + VSWN+++ GYA+ G +E+A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+ F M Q P + TF +L AC++ + G++I
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 249/528 (47%), Gaps = 39/528 (7%)
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L L + K +H + G L +++VD Y KC ++ A + FD ++ K+ +WN ++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSML 132
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G + + F + I P FTF+ L C+ ++ G QIH +IK+ E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG------------ 324
+ G+L +MY KC R+ DAR + + + N + WT + SGY +G
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 325 -----------------------RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL 361
++++AR LF EM +V++WN M++G+ + A+
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 362 DFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMY 421
++ F MRK++ + TLG +L+ ++ + +G VH + +SNI+V ++L+ MY
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTF 480
KC + +A F + ++ D V WNA++ GYA G+S + M F +M+ FTF
Sbjct: 373 SKCEKMEAAAKVFEALEEKND-VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 481 ETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSS 540
+LL+ CA LE G Q H +I+ N+ ALV++Y KC LE A ++F+
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 541 LDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
D + N++I + +E EA ++F M GI D L AC H + Q
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 601 FDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPM 648
+ K G+ L +I +Y + G +K+ + +P V M
Sbjct: 552 H-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 125/329 (37%), Gaps = 93/329 (28%)
Query: 325 RIREARELFNEMPER--------------------------------------------- 339
++ ++R++F+EMP+R
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 340 -------NVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
+V +WN+ML+ Y+ + L + + ++ T ++L+ CA + +
Sbjct: 117 QFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G+++H + + N + AL+DMY KC + AR F + + V W + +G
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD-PNTVCWTCLFSG 235
Query: 453 YARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y + G EEA+ F M+ E RP F T
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVT----------------------------- 266
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE--ALEVFGLM 569
++ Y + L+ A +F E SS DV+ N MI G H +RG E A+E F M
Sbjct: 267 ------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG--HGKRGCETVAIEYFFNM 318
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLAL 598
+K +K T +L A N+ L L
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 312 bits (800), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 316/615 (51%), Gaps = 34/615 (5%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+F+ N ++ Y + G L AR +FDEMP RD SWN+++ Y+ +G+ LE++ ++ +
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
S + + T ++VL + L + + LHG +K G V++ + LV Y K TD
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
ARR+FD++ +++VS+N ++ YL +E+V MF + L + +P T ++ L AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L I+ ++K F + V L ++Y KCG ++I+
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG---------------DMIT---- 360
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
AR++FN M ++ +SWN++++GY +S EA+ +M + D
Sbjct: 361 ------------ARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+T ++++V L+++K GK +H ++ ++ VSNAL+DMY KCG + + F
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQ 495
M D V+WN V++ R G + ++M + E P TF L CA++++
Sbjct: 469 MGTG-DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GK+IHC ++R YE + AL+E+Y+KC CLE + RVF+ S DV+ MI +
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
G +ALE F M+K GI PD + F I+ AC H G V L F+ M+ Y I P +E
Sbjct: 588 YGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIE 647
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L R + + E+F+ MP P + + CR +G E +RR+ EL
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 676 NPWAPFQFKITTNRF 690
NP P + +N +
Sbjct: 708 NPDDPGYSILASNAY 722
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 281/590 (47%), Gaps = 36/590 (6%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM-PERDGGSW 111
+SS + E R++ + +++ F + I+ Y + +F + P ++ W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N+++ A+++NG LE + + S VS ++ T+ +V+++ A + + ++ I+
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
GF ++ + ++LVD Y + ++T AR++FD++ ++ VSWN ++ Y G +EA+ +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVK 291
+ ++ I P +FT ++ L A L +G +HG +K VV L MY+K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 292 CGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGY 351
R DAR + D+ D R+ +S+ +++ GY L EM E +V
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGY-----------LKLEMVEESV---------- 293
Query: 352 TRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNI 411
+FL D +T+ +L C L ++ + K ++ ++ + +
Sbjct: 294 -----------RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 412 FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ- 470
V N L+D+Y KCG++ +AR F M + +D VSWN++++GY + G EAM F M
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 471 WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEY 530
E + T+ L++ ++ L+ GK +H I++ I++ AL+++Y KC +
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 531 AIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
++++F + D + N++I L+V M+K + PD TF L C
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
+L + + ++G +L+ +I++Y + G ++ RM
Sbjct: 522 LAAKRLGKEIHCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 228/501 (45%), Gaps = 37/501 (7%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ- 205
+ L SS+ EL +++H L++ G + L+D Y + +F +
Sbjct: 11 SRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 206 NKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
KN WN I+R + G EA+ + K+ + P +TF + + AC+ L G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
++ I+ + FE D V +L +MY + G L
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLT----------------------------- 158
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
AR++F+EMP R+++SWN++++GY+ ++EAL+ ++ + D T+ +L
Sbjct: 159 --RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
L +K G+ +HGF ++ +S + V+N L+ MY K AR F +M RD VS
Sbjct: 217 FGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDV-RDSVS 275
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+N ++ GY + EE++ F E + +P T ++L AC ++ L K I+ ++++
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+ + R L++VY KC + A VF D + NS+I G+ + EA+++
Sbjct: 336 AGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
F +M + DHIT+ ++ ++K + S K GI L +I +Y
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYA 454
Query: 626 RYGYMKELEDFVNRMPFNPTV 646
+ G + + + M TV
Sbjct: 455 KCGEVGDSLKIFSSMGTGDTV 475
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%), Gaps = 24/335 (7%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KCG + D+ +F M D +WN ++ A + G L++ M S V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T+ L A + K++H +++ G+ + + ++L++ Y KC + ++ R+
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
F+ + ++ V+W ++ Y + G G++A+ F M + I P + F ++ACS
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 261 YEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIV 317
EG+ + K ++ D ++ + ++ + ++ A + P + + W S++
Sbjct: 627 DEGLACFEKM-KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEAL------DFVFLMRKTT 371
SG + A E R +I N GY S+L A D V L+RK+
Sbjct: 686 RACRTSGDMETA-----ERVSRRIIELNPDDPGY--SILASNAYAALRKWDKVSLIRKSL 738
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
KD +T G S I++GK VH F +D
Sbjct: 739 KD-KHITKN------PGYSWIEVGKNVHVFSSGDD 766
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
+CAS A +++ L+ F + + N IE Y KCG L+++ +F+ M RD +
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVL 150
W M+ AY G + LE F DM SG+ + + + ++
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 472 ETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
+TR S L++ +N++ L ++IH VI + + G L++ Y+ +
Sbjct: 2 QTRVSSPFISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASS 58
Query: 532 IRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIH 590
+ VF+ S + +V + NS+I F N EALE +G +++ + PD TF ++ AC
Sbjct: 59 LSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118
Query: 591 EGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLR 650
+ ++ ++ + G L ++ +Y R G + + MP V
Sbjct: 119 LFDAEMGDLVYEQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 651 KIFDKCRKNGYATLG--EWAARRLNEL-NPW-APFQFKITT 687
I +GY++ G E A +EL N W P F +++
Sbjct: 178 LI------SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/632 (30%), Positives = 325/632 (51%), Gaps = 34/632 (5%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
+ QLCA SK++ + +++++ + L ++ Y CG+L +A +FDE+
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 108 GGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG 167
WN ++ ++G ++ LF M SGV + T++ V +S + + +QLHG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 168 LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKE 227
I+K GF + +SLV Y K + AR++FD++ ++ +SWN I+ Y+ G ++
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 228 AVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTE 287
+ +F +ML I T + C+ G +H + +K F +D +L +
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KCG L+ A+ + F EM +R+V+S+ +M
Sbjct: 340 MYSKCGDLDSAKAV-------------------------------FREMSDRSVVSYTSM 368
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+AGY R L EA+ M + D T+ +LN CA + GK VH +I ND
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+IFVSNAL+DMY KCG+++ A + F +M + +D +SWN ++ GY++ + EA++ F+
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 468 EMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKC 525
+ E R P + T +L ACA++S+ ++G++IH +++RN Y + +LV++Y KC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
L A +F + +S D++ MI G+ + G+EA+ +F M++ GI+ D I+F +L
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V +FF+ MR + I P +EHY C++ + R G + + F+ MP P
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPD 667
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + CR + L E A ++ EL P
Sbjct: 668 ATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 231/469 (49%), Gaps = 41/469 (8%)
Query: 145 TYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDI 204
T +VL+ A+ L K++ I GF + L S L Y C + +A R+FD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 205 QNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM 264
+ + A+ WN+++ +G+ ++ +F KM+ + ++TF+ + S L S + G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
Q+HG I+K F + V SL Y+K R++ AR + D+ ER++ISW SI++GY +G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
+ +F +M +++G +ID T+ +
Sbjct: 276 LAEKGLSVFVQM----------LVSGI---------------------EIDLATIVSVFA 304
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
CA I +G+ VH + +S N LLDMY KCG+L SA+ F +MS R V
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVV 363
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFV 503
S+ +++ GYAR G + EA+ F EM+ E P +T +L CA L++GK++H ++
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 504 IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREAL 563
N ++ AL+++Y KC ++ A VF E D+I N++I G+ N EAL
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 564 EVFGLMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGII 611
+F L+ +E PD T +L AC +L FD R +G I
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACA-------SLSAFDKGREIHGYI 525
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 7/327 (2%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y++ A + CA + + E +++ + +F+ N ++ Y KCG++ +A
Sbjct: 395 PDVYTVTA-VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEEL 157
+F EM +D SWN ++G Y++N + L LF L + S ++ T A VL + A
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+++HG I++ G+ + + +SLVD Y KC + A +FDDI +K+ VSW V++
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVI-IKIDFE 276
Y + G GKEA+ +F +M + I +F + L+ACS EG + ++ + E
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 277 GDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSIVSGYAISGRIREARELFN- 334
+ +M + G L A R + + P + W +++ G I ++ A ++
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 335 --EMPERNVISWNAMLAGYTRSLLWKE 359
E+ N + M Y + W++
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQ 720
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
+R+V N L + S + A+ + + K DID TL +L +CA +K GKE
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKW--DIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
V FI N + + + + L MY CG+L+ A F ++ + + WN ++ A+ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK-ALFWNILMNELAKSG 174
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
++ F +M +TF + + +++ S+ G+Q+H F++++ +
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
+LV Y K ++ A +VF E + DVI NS+I G+ N + L VF M GI+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 577 DHITFHGILLAC 588
D T + C
Sbjct: 295 DLATIVSVFAGC 306
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 303/597 (50%), Gaps = 100/597 (16%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR----- 217
+ +H ++K GF + +++ L+DAY KC + D R++FD + +N +WN +V
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 218 ---------------------RYLVAGNGK----EAVVMFFKMLREDIRPLN-FTFANAL 251
+V+G + E + +F M+ ++ LN ++FA+ L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
ACS L+ +G+Q+H +I K F D + +L +MY KCG + D
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND-------------- 205
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
A+ +F+EM +RNV+SWN+++ + ++ EALD +M ++
Sbjct: 206 -----------------AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR 248
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSN-IFVSNALLDMYRKCGNLRSA 430
+ D+VTL +++ CA LS IK+G+EVHG + +ND N I +SNA +DMY KC ++ A
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA 308
Query: 431 RIWFYQMSQR------------------------------RDKVSWNAVLTGYARRGQSE 460
R F M R R+ VSWNA++ GY + G++E
Sbjct: 309 RFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 461 EAMTSFSEMQWETR-PSKFTFETLLAACANISSLEQGKQIHCFVIRNCY------EINVV 513
EA++ F ++ E+ P+ ++F +L ACA+++ L G Q H V+++ + E ++
Sbjct: 369 EALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIF 428
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
+L+++Y KC C+E VF++ D + N+MI+GF N G EALE+F M + G
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKEL 633
KPDHIT G+L AC H G V+ +F SM +G+ P +HY CM+ L R G+++E
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + MP P + + C+ + TLG++ A +L E+ P + + +N +
Sbjct: 549 KSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMY 605
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 276/504 (54%), Gaps = 41/504 (8%)
Query: 43 SLYAHLFQLCASSK-AIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
S +A L C SK + + R + ++++ + +F+ NR I+ Y KCG+L+D R +FD
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 102 EMP-------------------------------ERDGGSWNAMLGAYTQNGFPGRTLEL 130
+MP ERD +WN+M+ + Q+ L
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
F M+ G N+ ++A+VL + + ++ Q+H LI K F +V + S+LVD Y K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + DA+R+FD++ ++N VSWN ++ + G EA+ +F ML + P T A+
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERN 309
+ AC+ LS+ G ++HG ++K D +D++L + +MY KC R+++AR + D RN
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
+I+ TS++SGYA++ + AR +F +M ERNV+SWNA++AGYT++ +EAL L+++
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEV------HGFIHRNDYSSNIFVSNALLDMYRK 423
+ + IL CA L+E+ +G + HGF ++ +IFV N+L+DMY K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 424 CGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFET 482
CG + + F +M + RD VSWNA++ G+A+ G EA+ F EM + +P T
Sbjct: 440 CGCVEEGYLVFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 483 LLAACANISSLEQGKQIHCFVIRN 506
+L+AC + +E+G+ + R+
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRD 522
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 215/389 (55%), Gaps = 39/389 (10%)
Query: 247 FANALFAC--SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQ 304
FA L +C S LS+ Y +H +IK F + + L + Y KCG LED R + D+
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFV 364
+RNI +W S+V+G G + EA LF MPER+ +WN+M++G+ + +EAL +
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 365 FLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKC 424
+M K +++ + +L+ C+GL+++ G +VH I ++ + S++++ +AL+DMY KC
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 425 GNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFET 482
GN+ A+ F +M R+ VSWN+++T + + G + EA+ F +M E+R P + T +
Sbjct: 201 GNVNDAQRVFDEMGD-RNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLAS 258
Query: 483 LLAACANISSLEQGKQIHCFVIRNCYEIN-VVCRGALVEVYTKCCCLEYA--------IR 533
+++ACA++S+++ G+++H V++N N ++ A V++Y KC ++ A IR
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 534 -----------------------VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+F + + +V+ N++I G+ N EAL +F L+K
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQ 599
+E + P H +F IL AC + L +Q
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQ 407
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/662 (29%), Positives = 336/662 (50%), Gaps = 40/662 (6%)
Query: 35 KSDEPVSYSLYAHLFQLCA--SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGN 92
+ D P Y L + Q C+ + +L+S LV V++ I+ Y K GN
Sbjct: 140 RKDSPNEYIL-SSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 93 LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+D AR +FD +PE+ +W M+ + G +L+LF + V + + VL +
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
+ L KQ+H I++ G + L + L+D+Y KC + A ++F+ + NKN +SW
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISW 318
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
++ Y KEA+ +F M + ++P + ++ L +C+ L + G Q+H IK
Sbjct: 319 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK 378
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG---RIREA 329
+ D V SL +MY KC L DAR + D +++ + +++ GY+ G + EA
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
+F +M R L+ L FV L+R + A L
Sbjct: 439 LNIFRDMRFR---------------LIRPSLLTFVSLLRAS----------------ASL 467
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ + + K++HG + + + +IF +AL+D+Y C L+ +R+ F +M + +D V WN++
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSM 526
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
GY ++ ++EEA+ F E+Q RP +FTF ++ A N++S++ G++ HC +++
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
E N AL+++Y KC E A + F ++S DV+ NS+I + ++ G++AL++
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M EGI+P++ITF G+L AC H G V+ L+ F+ M ++GI P+ EHY CM+ L R G
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAG 705
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ + + + +MP P + R + C K G L E AA +P F + +N
Sbjct: 706 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 689 RF 690
+
Sbjct: 766 IY 767
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 280/563 (49%), Gaps = 39/563 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A L QL AS + + ++ + +L N I Y + G + AR +F++MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAEELELG--V 161
ER+ SW+ M+ A +G +L +FL+ + S N+ ++ +++ + G +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
QL +VK GF +V + + L+D Y K + AR +FD + K+ V+W ++ +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 222 AGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G ++ +F++++ +++ P + + L ACS L G QIH I++ E D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+ L + YVKCGR+ A L + +NIISWT+++SGY + +EA ELF M +
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK--- 343
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
F ++ D IL CA L + G +VH +
Sbjct: 344 -----------------------FGLKP-----DMYACSSILTSCASLHALGFGTQVHAY 375
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG---Q 458
+ + ++ +V+N+L+DMY KC L AR F + D V +NA++ GY+R G +
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
EA+ F +M++ RPS TF +LL A A+++SL KQIH + + +++ A
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L++VY+ C CL+ + VF E D++I NSM G+ EAL +F ++ +PD
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 578 HITFHGILLACIHEGNVKLALQF 600
TF ++ A + +V+L +F
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEF 577
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 175/365 (47%), Gaps = 15/365 (4%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + AS ++ ++++ + + +F + I+ Y C L D+R +FDEM
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+D WN+M Y Q L LFL++ S ++ T+AN++ ++ + + ++
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
H ++KRG N + ++L+D Y KC DA + FD +++ V WN ++ Y G
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
GK+A+ M KM+ E I P TF L ACS +G++ ++++ E +
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVC 696
Query: 285 LTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REARELFNEMPERN 340
+ + + GRL AR L+++ P + I W S++SG A +G + A E+ ++
Sbjct: 697 MVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKD 756
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
S+ + Y +W EA K ++ +V G++ G S I + KEVH
Sbjct: 757 SGSFTMLSNIYASKGMWTEA--------KKVRERMKVE-GVVKE--PGRSWIGINKEVHI 805
Query: 401 FIHRN 405
F+ ++
Sbjct: 806 FLSKD 810
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
VHG I + ++SN L+++Y + G + AR F +M + R+ VSW+ +++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE-RNLVSWSTMVSACNHHG 124
Query: 458 QSEEAMTSFSEMQWETR---PSKFTFETLLAACANISSLEQGK----QIHCFVIRNCYEI 510
EE++ F E W TR P+++ + + AC+ + +G+ Q+ F++++ ++
Sbjct: 125 IYEESLVVFLEF-WRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDR 181
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+V L++ Y K ++YA VF + +MI G R +L++F +
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 571 KEGIKPDHITFHGILLAC----IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
++ + PD +L AC EG ++ +YG+ +I Y +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-----RYGLEMDASLMNVLIDSYVK 296
Query: 627 YGYMKELEDFVNRMP 641
G + N MP
Sbjct: 297 CGRVIAAHKLFNGMP 311
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 350/666 (52%), Gaps = 48/666 (7%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT---PPVFLLNRAIECYGKCGNLDD 95
P Y+ + + C+ ++ + R LE + T + +F+ + + + K G+L
Sbjct: 204 PTEYTFGSLVTTACSLTEP--DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS--- 152
AR +F++M R+ + N ++ + + +LF+DMN S + + +Y +L S
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPE 320
Query: 153 --SAEELELGVSKQLHGLIVKRGFCGNVI-LESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
AEE+ L +++HG ++ G ++ + + LV+ Y KC + DARR+F + +K++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
VSWN ++ G EAV + M R DI P +FT ++L +C+ L G QIHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
+K+ G D+ N+ ++++ YA +G + E
Sbjct: 441 SLKL---GIDL----------------------------NVSVSNALMTLYAETGYLNEC 469
Query: 330 RELFNEMPERNVISWNAMLAGYTRS-LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAG 388
R++F+ MPE + +SWN+++ RS EA+ ++ + ++++T +L+ +
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 389 LSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNA 448
LS ++GK++HG +N+ + NAL+ Y KCG + F +M++RRD V+WN+
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 449 VLTGYARRGQSEEAMT-SFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNC 507
+++GY +A+ + +Q R F + T+L+A A++++LE+G ++H +R C
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 508 YEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
E +VV ALV++Y+KC L+YA+R F + NSMI G+ + +G EAL++F
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 568 LMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
MK +G PDH+TF G+L AC H G ++ + F+SM YG+ P++EH+ CM + R
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 627 YGYMKELEDFVNRMPFNPTVPMLRKIFDK-CRKNG-YATLGEWAARRLNELNPWAPFQFK 684
G + +LEDF+ +MP P V + R + CR NG A LG+ AA L +L P +
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 829
Query: 685 ITTNRF 690
+ N +
Sbjct: 830 LLGNMY 835
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 269/589 (45%), Gaps = 37/589 (6%)
Query: 61 ARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQ 120
AR S L V+L N I Y + G+ AR +FDEMP R+ SW ++ Y++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 121 NGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGV--SKQLHGLIVKRGFCGNV 178
NG L DM G+ +NQ + +VLR+ E +G+ +Q+HGL+ K + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 179 ILESSLVDAYGKCMVMTD-ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR 237
++ + L+ Y KC+ A F DI+ KN+VSWN I+ Y AG+ + A +F M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 238 EDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ RP +TF + + L+ P + QI I K D V L + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
AR + +Q + RN ++ ++ G EA +LF +M N+M+ S
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM--------NSMIDVSPES- 310
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS-NIFVS 414
+V L+ + +GL K G+EVHG + + +
Sbjct: 311 -------YVILLSSFPEYSLAEEVGL-----------KKGREVHGHVITTGLVDFMVGIG 352
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWET 473
N L++MY KCG++ AR FY M+ +D VSWN+++TG + G EA+ + M + +
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 474 RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P FT + L++CA++ + G+QIH ++ ++NV AL+ +Y + L +
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 534 VFKESSSLDVIICNSMILGFCHNERG-REALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+F D + NS+I +ER EA+ F ++ G K + ITF +L A
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L Q + K I + +I Y + G M E +RM
Sbjct: 532 FGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMA 579
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 223/498 (44%), Gaps = 44/498 (8%)
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
G ++ H + K +V L ++L++AY + AR++FD++ +N VSW IV Y
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP--YEGMQIHGVIIKIDFEG 277
G KEA+V M++E I + F + L AC + S G QIHG++ K+ +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 278 DDVVLGSLTEMYVKC-GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D VV L MY KC G + A + +N +SW SI+S Y+ +G R A +F+ M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE--IKM 394
Y S R T + T G ++ L+E +++
Sbjct: 198 Q-------------YDGS-------------RPT-----EYTFGSLVTTACSLTEPDVRL 226
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
+++ I ++ +++FV + L+ + K G+L AR F QM + R+ V+ N ++ G
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLV 285
Query: 455 RRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANIS-----SLEQGKQIHCFVIRN-CY 508
R+ EEA F +M S ++ LL++ S L++G+++H VI
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGL 568
+ V LV +Y KC + A RVF + D + NSMI G N EA+E +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 569 MKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
M++ I P T L +C KL Q K GI + ++ LY G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETG 464
Query: 629 YMKELEDFVNRMPFNPTV 646
Y+ E + MP + V
Sbjct: 465 YLNECRKIFSSMPEHDQV 482
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 145/304 (47%), Gaps = 15/304 (4%)
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H +++N ++++ N L++ Y + G+ SAR F +M R + VSW +++GY+R G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACIVSGYSRNGE 82
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ--GKQIHCFVIRNCYEINVVCR 515
+EA+ +M E +++ F ++L AC I S+ G+QIH + + Y ++ V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 516 GALVEVYTKCC-CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
L+ +Y KC + YA+ F + + + NS+I + R A +F M+ +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 575 KPDHITFHGIL-LAC-IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+P TF ++ AC + E +V+L Q +++ K G++ L ++ + + G +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ-KSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPW---APFQFKITTNR 689
N+M V + + R+ GE A + ++N +P + I +
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQK----WGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 690 FDRY 693
F Y
Sbjct: 318 FPEY 321
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L++ + + +YA + AS + ++ + V V + + ++ Y KCG L
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQITYANVLR- 151
D A F+ MP R+ SWN+M+ Y ++G L+LF M G + + +T+ VL
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 152 -SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAV 210
S A LE G K + G + S + D G+ + +D K +
Sbjct: 731 CSHAGLLEEGF-KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK----LEDFIEKMPM 785
Query: 211 SWNVIVRRYLV----------AGNGKEAVVMFFKMLREDIRPLNFTFANALFA 253
NV++ R ++ A GK+A M F++ E+ +N+ ++A
Sbjct: 786 KPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN--AVNYVLLGNMYA 836
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 334/684 (48%), Gaps = 85/684 (12%)
Query: 31 SGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT-FYPTPPVFLLNRAIECYGK 89
S L++ E Y L Q C+S R+ L+ + + V + N ++ Y +
Sbjct: 15 SSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSR 74
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
G + AR LFDEMP+R+ SWN M+ Y +G G +L F DM
Sbjct: 75 SGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF-DM--------------- 118
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ + G+ NV+ V + K ++ ARR+F+ + K+
Sbjct: 119 ------------------MPERDGYSWNVV-----VSGFAKAGELSVARRLFNAMPEKDV 155
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF-----TFANALFACSFLSSPYEGM 264
V+ N ++ Y++ G +EA+ +F + LNF T L AC+ L + G
Sbjct: 156 VTLNSLLHGYILNGYAEEALRLF--------KELNFSADAITLTTVLKACAELEALKCGK 207
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
QIH I+ E D + SL +Y KCG L A +L+Q E + S ++++SGYA G
Sbjct: 208 QIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCG 267
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILN 384
R+ E+R LF+ R VI WN+M++GY + + EAL MR T++ D TL ++N
Sbjct: 268 RVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVIN 326
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSA-------------- 430
C GL ++ GK++H + +I V++ LLDMY KCG+ A
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 431 -----RIWF-----------YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR 474
+++F ++ + + +SWN++ G+++ G + E + F +M
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 475 PS-KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIR 533
P+ + + ++++ACA+ISSLE G+Q+ + + V +L+++Y KC +E+ R
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF D + NSMI G+ N +G EA+++F M GI+P ITF +L AC + G
Sbjct: 507 VFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGL 566
Query: 594 VKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIF 653
V+ + F+SM+ +G +P EH+ CM+ L R GY++E + V MPF+ M I
Sbjct: 567 VEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSIL 626
Query: 654 DKCRKNGYATLGEWAARRLNELNP 677
C NGY +G+ AA ++ EL P
Sbjct: 627 RGCVANGYKAMGKKAAEKIIELEP 650
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 14/339 (4%)
Query: 37 DEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDA 96
D+ V S ++ C S +EA KL S + ++ LLN I+ Y CG +DDA
Sbjct: 351 DDIVVASTLLDMYSKCGSP---MEACKLFSEVESY----DTILLNSMIKVYFSCGRIDDA 403
Query: 97 RGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+ +F+ + + SWN+M ++QNG TLE F M+ + ++++ ++V+ + A
Sbjct: 404 KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASI 463
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
L + +Q+ G + ++ SSL+D Y KC + RR+FD + + V WN ++
Sbjct: 464 SSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMI 523
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID-- 274
Y G G EA+ +F KM IRP TF L AC++ EG ++ +K+D
Sbjct: 524 SGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFES-MKVDHG 582
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAISGRI---REAR 330
F D + ++ + G +E+A L+++ P + + W+SI+ G +G ++A
Sbjct: 583 FVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAA 642
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
E E+ N +++ + A + S W+ + LMR+
Sbjct: 643 EKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 305 bits (781), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 308/602 (51%), Gaps = 35/602 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F + + + + G++D+A +F+ + + ++ ML + + + L+ F+ M +
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
V + +L+ +E EL V K++HGL+VK GF ++ + L + Y KC + +A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
R++FD + ++ VSWN IV Y G + A+ M M E+++P T + L A S L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G +IHG ++ F+ + +L +MY KCG LE
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE--------------------- 288
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQ 376
AR+LF+ M ERNV+SWN+M+ Y ++ KEA L F ++ + K D
Sbjct: 289 ----------TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+G L+ CA L +++ G+ +H N+ V N+L+ MY KC + +A F +
Sbjct: 339 SVMG-ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
+ Q R VSWNA++ G+A+ G+ +A+ FS+M+ T +P FT+ +++ A A +S
Sbjct: 398 L-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
K IH V+R+C + NV ALV++Y KC + A +F S V N+MI G+
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ G+ ALE+F M+K IKP+ +TF ++ AC H G V+ L+ F M+ Y I ++
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY M+ L R G + E DF+ +MP P V + + C+ + E AA RL EL
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 676 NP 677
NP
Sbjct: 637 NP 638
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 278/564 (49%), Gaps = 51/564 (9%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EPV Y+ + +L ++C + +++ LV + +F + Y KC +++AR
Sbjct: 132 EPVVYN-FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+FD MPERD SWN ++ Y+QNG LE+ M + + IT +VL + +
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ V K++HG ++ GF V + ++LVD Y KC + AR++FD + +N VSWN ++
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
Y+ N KEA+++F KML E ++P + + AL AC+ L G IH + +++ +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
+ V+ SL MY KC ++ A + + R ++SW +++ G+A +GR +A F++M
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
R V D T ++ A LS K
Sbjct: 431 SRTV-------------------------------KPDTFTYVSVITAIAELSITHHAKW 459
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + R+ N+FV+ AL+DMY KCG + AR+ F MS+R +WNA++ GY G
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTHG 518
Query: 458 QSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCY--EINVV 513
+ A+ F EMQ T +P+ TF ++++AC++ +E G + CF +++ Y E+++
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG--LKCFYMMKENYSIELSMD 576
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH-----NERGREALEVFGL 568
GA+V++ + L A + + +LG C N + A +F L
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 569 MKKEGIKPDHITFHGILLACIHEG 592
PD +H +LLA I+
Sbjct: 637 ------NPDDGGYH-VLLANIYRA 653
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 223/437 (51%), Gaps = 38/437 (8%)
Query: 152 SSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SS +EL +Q+ L+ K G ++ LV + + + +A R+F+ I +K V
Sbjct: 48 SSLKEL-----RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
++ +++ + + +A+ F +M +D+ P+ + F L C + G +IHG+++
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K F D + L MY KC ++ +AR + D+ ER+++SW +IV+GY+ +G R A E
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M E N+ K + +T+ +L + L
Sbjct: 223 MVKSMCEENL----------------KPSF---------------ITIVSVLPAVSALRL 251
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
I +GKE+HG+ R+ + S + +S AL+DMY KCG+L +AR F M + R+ VSWN+++
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE-RNVVSWNSMID 310
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
Y + +EAM F +M E +P+ + L ACA++ LE+G+ IH + +
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
NV +L+ +Y KC ++ A +F + S ++ N+MILGF N R +AL F M+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 571 KEGIKPDHITFHGILLA 587
+KPD T+ ++ A
Sbjct: 431 SRTVKPDTFTYVSVITA 447
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 278/516 (53%), Gaps = 4/516 (0%)
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
N+ ++L+ AY K ++++ F+ + +++ V+WNV++ Y ++G AV + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 237 REDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
R+ L T L S G QIHG +IK+ FE +V L MY G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
DA+ + D+RN + + S++ G G I +A +LF M E++ +SW AM+ G ++
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNG 249
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
L KEA++ M+ +DQ G +L C GL I GK++H I R ++ +I+V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
AL+DMY KC L A+ F +M Q+ + VSW A++ GY + G++EEA+ F +MQ
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
P +T ++ACAN+SSLE+G Q H I + V +LV +Y KC ++ + R+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F E + D + +M+ + R E +++F M + G+KPD +T G++ AC G V
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
+ ++F M +YGI+P + HY CMI L+ R G ++E F+N MPF P +
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 655 KCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
CR G +G+WAA L EL+P P + + ++ +
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 158/605 (26%), Positives = 279/605 (46%), Gaps = 104/605 (17%)
Query: 27 TKTISGHLKSDEPVSYS-LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE 85
K I G++ P + LY ++ A K+ AR++ + P P +F N +
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRI----PQPNLFSWNNLLL 80
Query: 86 CYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN--Q 143
Y K G + + F+++P+RDG +WN ++ Y+ +G G ++ + M SAN +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTR 139
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF-- 201
+T +L+ S+ + + KQ+HG ++K GF +++ S L+ Y ++DA+++F
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 202 -----------------------DDIQ-----NKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
D +Q K++VSW +++ G KEA+ F
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
+M + ++ + F + L AC L + EG QIH II+ +F+ V +L +MY KC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
L A+ + D+ ++N++SWT++V GY +GR EA ++F
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF-------------------- 359
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
LD M+++ D D TLG ++ CA +S ++ G + HG + + V
Sbjct: 360 -------LD----MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWE 472
SN+L+ +Y KCG++ + F +M+ RD VSW A+++ YA+ G++ E + F +M Q
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 473 TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
+P T +++AC+ +E+G++ Y K EY I
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQR-----------------------YFKLMTSEYGI 504
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
S+ C MI F + R EA+ M PD I + +L AC ++G
Sbjct: 505 -----VPSIGHYSC--MIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKG 554
Query: 593 NVKLA 597
N+++
Sbjct: 555 NLEIG 559
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 202/412 (49%), Gaps = 32/412 (7%)
Query: 266 IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
IHG II+ + + ++ Y AR + D+ + N+ SW +++ Y+ +G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD-FVFLMRKTTKDIDQVTLGLILN 384
I E F ++P+R+ ++WN ++ GY+ S L A+ + +MR + ++ +VTL +L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 385 VCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR---- 440
+ + + +GK++HG + + + S + V + LL MY G + A+ FY + R
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 441 -------------------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TR 474
+D VSW A++ G A+ G ++EA+ F EM+ + +
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRV 534
++ F ++L AC + ++ +GKQIH +IR ++ ++ AL+++Y KC CL YA V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F +V+ +M++G+ R EA+++F M++ GI PDH T + AC + ++
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
+ QF G+I + ++ LY + G + + N M V
Sbjct: 388 EEGSQFHGKA-ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV 438
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 303 bits (775), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 183/635 (28%), Positives = 315/635 (49%), Gaps = 37/635 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+ L + CAS + + + ++ + ++ + + Y K G L AR +F+EM
Sbjct: 49 FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR 108
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD W AM+G Y++ G G L +M G+ +T +L E +L +
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QC 165
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH V GF ++ + +S+++ Y KC + DA+ +FD ++ ++ VSWN ++ Y GN
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS 284
E + + ++M + +RP TF +L + G +H I+K F+ D + +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 285 LTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISW 344
L MY+KCG+ E + +L+ +P ++V+ W
Sbjct: 286 LITMYLKCGKEEASYRVLET-------------------------------IPNKDVVCW 314
Query: 345 NAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR 404
M++G R ++AL M ++ D+ + ++ CA L +G VHG++ R
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 405 NDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMT 464
+ Y+ + N+L+ MY KCG+L + + F +M++R D VSWNA+++GYA+ +A+
Sbjct: 375 HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER-DLVSWNAIISGYAQNVDLCKALL 433
Query: 465 SFSEMQWET--RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
F EM+++T + FT +LL AC++ +L GK IHC VIR+ + ALV++Y
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
+KC LE A R F S DV+ +I G+ + +G ALE++ G++P+H+ F
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFL 553
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L +C H G V+ L+ F SM +G+ P EH C++ L CR +++ F
Sbjct: 554 AVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFT 613
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P++ +L I D CR NG + + + EL P
Sbjct: 614 RPSIDVLGIILDACRANGKTEVEDIICEDMIELKP 648
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 255/541 (47%), Gaps = 44/541 (8%)
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
+N+ + + +G + L F M + + + T+ ++L++ A L +H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
GF + + SSLV+ Y K ++ AR++F++++ ++ V W ++ Y AG EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 231 MFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQ---IHGVIIKIDFEGDDVVLGSLTE 287
+ +M + I+P T LS E Q +H + F+ D V+ S+
Sbjct: 134 LVNEMRFQGIKPGPVTLLE------MLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
+Y KC + DA+ L DQ ++R+++SW +++SGYA G +
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM--------------------- 226
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
E L ++ MR DQ T G L+V + +++MG+ +H I + +
Sbjct: 227 ----------SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++ + AL+ MY KCG A + +D V W +++G R G++E+A+ FS
Sbjct: 277 DVDMHLKTALITMYLKCGK-EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 468 EM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
EM Q + S +++A+CA + S + G +H +V+R+ Y ++ +L+ +Y KC
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP-DHITFHGIL 585
L+ ++ +F+ + D++ N++I G+ N +AL +F MK + ++ D T +L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC G + + + + + I P ++ +Y + GY++ + + + +
Sbjct: 456 QACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Query: 646 V 646
V
Sbjct: 515 V 515
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 181/653 (27%), Positives = 327/653 (50%), Gaps = 34/653 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ ++ + C +++ +L ++ + ++ N + Y GNL A
Sbjct: 286 PTPYA-FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELE 158
+F M +RD ++N ++ +Q G+ + +ELF M+ G+ + T A+++ + + +
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L +QLH K GF N +E +L++ Y KC + A F + + +N V WNV++
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y + + + + +F +M E+I P +T+ + L C L G QIH IIK +F+ +
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 524
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V L +MY K G+L+ A +L IR A
Sbjct: 525 AYVCSVLIDMYAKLGKLDTAWDIL-----------------------IRFAG-------- 553
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V+SW M+AGYT+ +AL M D+V L ++ CAGL +K G+++
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + +SS++ NAL+ +Y +CG + + + F Q ++ D ++WNA+++G+ + G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGN 672
Query: 459 SEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+EEA+ F M E + FTF + + A + ++++QGKQ+H + + Y+ A
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+ +Y KC + A + F E S+ + + N++I + + G EAL+ F M ++P+
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
H+T G+L AC H G V + +F+SM +YG+ P+ EHY C++ + R G + ++F+
Sbjct: 793 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFI 852
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP P + R + C + +GE+AA L EL P + + +N +
Sbjct: 853 QEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 267/581 (45%), Gaps = 35/581 (6%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
++ ++ E RKL S ++ L + + Y G+L A +FDEMPER +WN
Sbjct: 97 TNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 114 MLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS-SAEELELGVSKQLHGLIVKR 172
M+ G LF+ M V+ N+ T++ VL + + V +Q+H I+ +
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 173 GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMF 232
G + ++ + L+D Y + + ARR+FD ++ K+ SW ++ EA+ +F
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 233 FKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKC 292
M I P + F++ L AC + S G Q+HG+++K+ F D V +L +Y
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 293 GRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYT 352
G N+IS A +F+ M +R+ +++N ++ G +
Sbjct: 337 G---------------NLIS----------------AEHIFSNMSQRDAVTYNTLINGLS 365
Query: 353 RSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIF 412
+ ++A++ M + D TL ++ C+ + G+++H + + ++SN
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 413 VSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE 472
+ ALL++Y KC ++ +A +F + ++ + V WN +L Y + F +MQ E
Sbjct: 426 IEGALLNLYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 473 -TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYA 531
P+++T+ ++L C + LE G+QIH +I+ +++N L+++Y K L+ A
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 532 IRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHE 591
+ + DV+ +MI G+ +AL F M GI+ D + + AC
Sbjct: 545 WDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 592 GNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+K Q + C G L ++ LY R G ++E
Sbjct: 605 QALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 212/470 (45%), Gaps = 44/470 (9%)
Query: 33 HLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIE-----CY 87
HL EP S +L A L C++ + ++L + Y T F N IE Y
Sbjct: 381 HLDGLEPDSNTL-ASLVVACSADGTLFRGQQLHA-----YTTKLGFASNNKIEGALLNLY 434
Query: 88 GKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYA 147
KC +++ A F E + WN ML AY + +F M + NQ TY
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 148 NVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
++L++ +L + +Q+H I+K F N + S L+D Y K + A + K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIH 267
+ VSW ++ Y +A+ F +ML IR NA+ AC+ L + EG QIH
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 268 GVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIR 327
F D +L +Y +CG++E++ +Q + + I+W ++VSG+ SG
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 328 EARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCA 387
EA +F M + D + T G + +
Sbjct: 675 EALRVFVRMNREGI-------------------------------DNNNFTFGSAVKAAS 703
Query: 388 GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN 447
+ +K GK+VH I + Y S V NAL+ MY KCG++ A F ++S +++VSWN
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST-KNEVSWN 762
Query: 448 AVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
A++ Y++ G EA+ SF +M RP+ T +L+AC++I +++G
Sbjct: 763 AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 226/486 (46%), Gaps = 41/486 (8%)
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L ++LH I+K G N L L D Y + A ++FD++ + +WN +++
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM-QIHGVIIKIDFEG 277
E +F +M+ E++ P TF+ L AC S ++ + QIH I+
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
VV L ++Y + +G + AR +F+ +
Sbjct: 221 STVVCNPLIDLYSR-------------------------------NGFVDLARRVFDGLR 249
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
++ SW AM++G +++ EA+ M +L+ C + +++G++
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
+HG + + +SS+ +V NAL+ +Y GNL SA F MSQR D V++N ++ G ++ G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCG 368
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
E+AM F M + P T +L+ AC+ +L +G+Q+H + + + N G
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
AL+ +Y KC +E A+ F E+ +V++ N M++ + + R + +F M+ E I P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 577 DHITFHGILLACIHEGNVKLALQFFDS-MRCKYGIIPQLEHYEC--MIKLYCRYGYMKEL 633
+ T+ IL CI G+++L Q ++ + QL Y C +I +Y + G +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTA 544
Query: 634 EDFVNR 639
D + R
Sbjct: 545 WDILIR 550
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 22/198 (11%)
Query: 474 RPSKFTFETLLAACANIS-SLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
RP+ T + LL C + SL++G+++H +++ + N L + Y L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF E + N MI E +F M E + P+ TF G+L AC G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGG 199
Query: 593 NVKLALQFFDSMRCKY-GIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRK 651
+V + R Y G+ +I LY R G+ V + R+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF----------------VDLARR 243
Query: 652 IFDKCRKNGYATLGEWAA 669
+FD R +++ W A
Sbjct: 244 VFDGLRLKDHSS---WVA 258
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 310/630 (49%), Gaps = 57/630 (9%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y K ++ +F +PE++ SW+A++ QN L+ F +M +Q
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
YA+VLRS A EL + QLH +K F + I+ ++ +D Y KC M DA+ +FD+
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
+N N S+N ++ Y +G +A+++F +++ + + + AC+ + EG
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
+QI+G+ IK D V + +MY KC L
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA--------------------------- 434
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
EA +F+EM R+ +SWNA++A + ++ E L M ++ + D+ T G IL
Sbjct: 435 ----EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
C G S + G E+H I ++ +SN V +L+DMY KCG + A + QR +
Sbjct: 491 KACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 444 -------------------VSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETL 483
VSWN++++GY + QSE+A F+ M + P KFT+ T+
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L CAN++S GKQIH VI+ + +V LV++Y+KC L + +F++S D
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ N+MI G+ H+ +G EA+++F M E IKP+H+TF IL AC H G + L++F
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKC---RKNG 660
M+ YG+ PQL HY M+ + + G +K + + MPF + R + C R N
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNN- 788
Query: 661 YATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ E A L L+P + + +N +
Sbjct: 789 -VEVAEEATAALLRLDPQDSSAYTLLSNVY 817
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 251/463 (54%), Gaps = 14/463 (3%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
K + VS S+YA + + CA+ + +L ++ + + ++ Y KC N+
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DA+ LFD + S+NAM+ Y+Q + L LF + SG+ ++I+ + V R+ A
Sbjct: 334 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 393
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L Q++GL +K +V + ++ +D YGKC + +A R+FD+++ ++AVSWN
Sbjct: 394 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ + G G E + +F MLR I P FTF + L AC+ S Y GM+IH I+K
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKSG 512
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
+ V SL +MY KCG +E+A + + +R +SG + E ++ N
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA-----------NVSGTMEELEKMHN 561
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+ + +SWN++++GY ++A M + D+ T +L+ CA L+ +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GK++H + + + S++++ + L+DMY KCG+L +R+ F + S RRD V+WNA++ GYA
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF-EKSLRRDFVTWNAMICGYA 680
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQG 496
G+ EEA+ F M E +P+ TF ++L ACA++ +++G
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/585 (28%), Positives = 284/585 (48%), Gaps = 65/585 (11%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P ++ L L Q+ +S+ V A + + P V N+ I Y K ++ A
Sbjct: 81 PTTFVLNC-LLQVYTNSRDFVSASMVFDKM----PLRDVVSWNKMINGYSKSNDMFKANS 135
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAEE 156
F+ MP RD SWN+ML Y QNG +++E+F+DM G+ + T+A +L+ S E+
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 195
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
LG+ Q+HG++V+ G +V+ S+L+D Y K ++ R+F I KN+VSW+ I+
Sbjct: 196 TSLGM--QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 217 RRYLVAGNGKEAVVMFFK-MLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V N + FFK M + + +A+ L +C+ LS G Q+H +K DF
Sbjct: 254 AG-CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
D +V + +MY KC ++DA+ L D + N S+ ++++GY+ +A LF+
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
L L F D+++L + CA + + G
Sbjct: 373 --------------------LMSSGLGF-----------DEISLSGVFRACALVKGLSEG 401
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+++G ++ S ++ V+NA +DMY KC L A F +M +RRD VSWNA++ + +
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSWNAIIAAHEQ 460
Query: 456 RGQSEEAMTSF-SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G+ E + F S ++ P +FTF ++L AC SL G +IH ++++ N
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV 519
Query: 515 RGALVEVYTKCCCLEYAIRVFKE-------SSSLDVI----------IC---NSMILGFC 554
+L+++Y+KC +E A ++ S +++ + +C NS+I G+
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 555 HNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
E+ +A +F M + GI PD T+ +L C + + L Q
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 252/565 (44%), Gaps = 70/565 (12%)
Query: 127 TLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVD 186
+ F D + S + ++ V + A++ L + KQ H ++ GF + + L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 187 AYGKCMVMTDARRMFDDIQNKNAVSWNVIVR----------------------------- 217
Y A +FD + ++ VSWN ++
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 218 --RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
YL G +++ +F M RE I TFA L CSFL GMQIHG+++++
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+ D V +L +MY K R ++ + E+N +SW++I++G
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV-------------- 257
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ N++S AL F M+K + Q +L CA LSE+++G
Sbjct: 258 --QNNLLSL---------------ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
++H ++D++++ V A LDMY KC N++ A+I F S+ ++ S+NA++TGY++
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF-DNSENLNRQSYNAMITGYSQ 359
Query: 456 RGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
+A+ F M + + + ACA + L +G QI+ I++ ++V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
A +++Y KC L A RVF E D + N++I N +G E L +F M + I
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
+PD TF IL AC G++ ++ S+ K G+ +I +Y + G ++E E
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 635 D----FVNRMPFNPTVPMLRKIFDK 655
F R + T+ L K+ +K
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNK 562
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 162/346 (46%), Gaps = 39/346 (11%)
Query: 84 IECYGKCGNLDDAR-------------GLFDEMPERDGG-------SWNAMLGAYTQNGF 123
I+ Y KCG +++A G +E+ + SWN+++ Y
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 124 PGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
LF M G++ ++ TYA VL + A G+ KQ+H ++K+ +V + S+
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LVD Y KC + D+R MF+ ++ V+WN ++ Y G G+EA+ +F +M+ E+I+P
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGL 301
+ TF + L AC+ + +G++ + ++K D+ D + ++ ++ K G+++ A L
Sbjct: 704 HVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 762
Query: 302 L-DQPDERNIISWTSIVSGYAISGR----IREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + P E + + W +++ I EA + ++ ++ + Y + +
Sbjct: 763 IREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGM 822
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W++ D MR G L G S +++ E+H F+
Sbjct: 823 WEKVSDLRRNMR-----------GFKLKKEPGCSWVELKDELHVFL 857
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 339 RNVISWNAMLA---GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
R+V+S+N L Y R + DF+ + + CA +++G
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFL----NQVNSVSTTNFSFVFKECAKQGALELG 67
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQR--------------- 440
K+ H + + + FV N LL +Y + SA + F +M R
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 441 ---------------RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
RD VSWN++L+GY + G+S +++ F +M E TF +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 485 AACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVI 544
C+ + G QIH V+R + +VV AL+++Y K ++RVF+ + +
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 545 ICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+++I G N AL+ F M+K + +L +C ++L Q
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 310/633 (48%), Gaps = 39/633 (6%)
Query: 50 QLCASSKAIVEARKLESNLVTFYPTPPV-FLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
+ C +S ++++ + +E N+V V F N + GNL AR +FD+MP D
Sbjct: 13 RFCTTSISLLQ-KPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDI 71
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQITYANVLRSSAEELELGVSKQL 165
SW +++ Y L LF M +H+ VS + + VL++ + + + L
Sbjct: 72 VSWTSIIKRYVTANNSDEALILFSAMRVVDHA-VSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H VK +V + SSL+D Y + + + R+F ++ +NAV+W I+ + AG
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
KE + F +M R + +TFA AL AC+ L G IH +I F V SL
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
MY +CG ++D GL LF M ER+V+SW
Sbjct: 251 ATMYTECGEMQD--GLC-----------------------------LFENMSERDVVSWT 279
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+++ Y R +A++ MR + ++ T + + CA LS + G+++H +
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ ++ VSN+++ MY CGNL SA + F M + RD +SW+ ++ GY + G EE
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 466 FSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
FS M Q T+P+ F +LL+ N++ +E G+Q+H + E N R +L+ +Y+K
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
C ++ A +F E+ D++ +MI G+ + + +EA+++F K G +PD +TF +
Sbjct: 459 CGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 585 LLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNP 644
L AC H G + L +F+ M+ Y + P EHY CM+ L CR G + + E +N M +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK 578
Query: 645 TVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ + C+ G G AA R+ EL+P
Sbjct: 579 DDVVWTTLLIACKAKGDIERGRRAAERILELDP 611
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 247/539 (45%), Gaps = 46/539 (8%)
Query: 37 DEPVS--YSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
D VS S+ + + + C S I L + V V++ + ++ Y + G +D
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ +F EMP R+ +W A++ G L F +M+ S ++ T+A L++ A
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
++ K +H ++ RGF + + +SL Y +C M D +F+++ ++ VSW
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ Y G +AV F KM + P TFA+ AC+ LS G Q+H ++ +
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
V S+ +MY CG L A L R+IISW++I+ GY +G E + F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF- 399
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
SW MR++ L +L+V ++ I+
Sbjct: 400 --------SW----------------------MRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
G++VH N V ++L++MY KCG+++ A + F + + R D VS A++ GYA
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE-TDRDDIVSLTAMINGYA 488
Query: 455 RRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYEINV 512
G+S+EA+ F + ++ RP TF ++L AC + L+ G H F +++ Y +
Sbjct: 489 EHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYFNMMQETYNMRP 546
Query: 513 VCR--GALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHN----ERGREALE 564
G +V++ + L A ++ E S D ++ ++++ C ERGR A E
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA-CKAKGDIERGRRAAE 604
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 210/459 (45%), Gaps = 36/459 (7%)
Query: 35 KSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLD 94
+S+E +A + CA + + + + ++++ + + N Y +CG +
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ 261
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
D LF+ M ERD SW +++ AY + G + +E F+ M +S V N+ T+A++ + A
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
L +QLH ++ G ++ + +S++ Y C + A +F ++ ++ +SW+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
I+ Y AG G+E F M + +P +F A+ L ++ G Q+H + +
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
E + V SL MY KCG +++A + + D +I+S T++++GYA G+ +EA +LF
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL-ILNVCAGLSEIK 393
+ ++ G+ +++ F+ ++ T Q+ LG N+ ++
Sbjct: 502 K----------SLKVGFR-----PDSVTFISVLTACTHS-GQLDLGFHYFNMMQETYNMR 545
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
KE +G ++D+ + G L A +MS ++D V W +L
Sbjct: 546 PAKEHYG---------------CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 454 ARRGQSEEAMTSFSEMQWETRPSKFTFETLLAACANISS 492
+G E + +E E P T T L ANI S
Sbjct: 591 KAKGDIERGRRA-AERILELDP---TCATALVTLANIYS 625
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 322/656 (49%), Gaps = 41/656 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y LFQ A S ++V + +++ P ++LLN + Y KC L AR LFD MP
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ER+ S+N+++ YTQ GF + +ELFL+ + + ++ TYA L E +L + +
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LHGL+V G V L + L+D Y KC + A +FD ++ VSWN ++ Y+ G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACSF-LSSPY--EGMQIHGVIIKIDFEGDDVV 281
+E + + KM R+ + + + L AC L+ + +GM IH K+ E D VV
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L +MY K +G ++EA +LF+ MP +NV
Sbjct: 290 RTALLDMYAK-------------------------------NGSLKEAIKLFSLMPSKNV 318
Query: 342 ISWNAMLAGYTR-----SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+++NAM++G+ + EA M++ + T ++L C+ ++ G+
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++H I +N++ S+ F+ +AL+++Y G+ F S ++D SW +++ + +
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMIDCHVQN 437
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
Q E A F ++ RP ++T +++ACA+ ++L G+QI + I++ + +
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK 497
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+ + +Y K + A +VF E + DV ++MI + EAL +F MK GIK
Sbjct: 498 TSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Query: 576 PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELED 635
P+ F G+L+AC H G V L++F M+ Y I P +H+ C++ L R G + + E+
Sbjct: 558 PNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 636 FVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFD 691
+ F R + CR + +G+ A RL EL P A + + N ++
Sbjct: 618 LILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 673
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 131/284 (46%), Gaps = 5/284 (1%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
EP S S ++ + + C+++K + R++ + + F+ + IE Y G+ +D
Sbjct: 355 EP-SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
F ++D SW +M+ + QN +LF + S + + T + ++ + A+
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L +Q+ G +K G +++S + Y K M A ++F ++QN + +++ ++
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF-- 275
G+ EA+ +F M I+P F L AC +G++ + +K D+
Sbjct: 534 SLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRI 592
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGL-LDQPDERNIISWTSIVS 318
++ L ++ + GRL DA L L + + ++W +++S
Sbjct: 593 NPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 281/498 (56%), Gaps = 6/498 (1%)
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F IQ N + WN + R + ++ + A+ ++ M+ + P ++TF L +C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
+ EG QIHG ++K+ + D V SL MYV+ GRLEDA + D+ R+++S+T++
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ GYA G I A++LF+E+P ++V+SWNAM++GY + +KEAL+ M KT D+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +++ CA I++G++VH +I + + SN+ + NAL+D+Y KCG L +A F +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLE 494
+ +D +SWN ++ GY +EA+ F EM ET P+ T ++L ACA++ +++
Sbjct: 327 LPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAID 384
Query: 495 QGKQIHCFVIRNCYEINVVC--RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
G+ IH ++ + + R +L+++Y KC +E A +VF + N+MI G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F + R + ++F M+K GI+PD ITF G+L AC H G + L F +M Y + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
+LEHY CMI L G KE E+ +N M P + + C+ +G LGE A L
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 564
Query: 673 NELNPWAPFQFKITTNRF 690
++ P P + + +N +
Sbjct: 565 IKIEPENPGSYVLLSNIY 582
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 68/439 (15%)
Query: 96 ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
A +F + E + WN M + + P L+L++ M G+ N T+ VL+S A+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 156 ELELGVSKQLHGLIVKRGFCG--------------------------------NVILESS 183
+Q+HG ++K G C +V+ ++
Sbjct: 147 SKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
L+ Y + +A+++FD+I K+ VSWN ++ Y GN KEA+ +F M++ ++RP
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
T + AC+ S G Q+H I F + ++ +L ++Y KCG LE A GL +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
+ +++ISW +++ GY +EA LF E
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQE---------------------------- 357
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHR--NDYSSNIFVSNALLDMY 421
M ++ + + VT+ IL CA L I +G+ +H +I + ++ + +L+DMY
Sbjct: 358 ---MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 422 RKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTF 480
KCG++ +A F + + SWNA++ G+A G+++ + FS M + +P TF
Sbjct: 415 AKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 481 ETLLAACANISSLEQGKQI 499
LL+AC++ L+ G+ I
Sbjct: 474 VGLLSACSHSGMLDLGRHI 492
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 36/332 (10%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLE---------------SNLVTFY----------- 72
P SY+ + + + CA SKA E +++ ++L++ Y
Sbjct: 132 PNSYT-FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHK 190
Query: 73 -----PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
P V I+ Y G +++A+ LFDE+P +D SWNAM+ Y + G
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
LELF DM + V ++ T V+ + A+ + + +Q+H I GF N+ + ++L+D
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
Y KC + A +F+ + K+ +SWN ++ Y KEA+++F +MLR P + T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 248 ANALFACSFLSSPYEGMQIHGVIIKIDFEG---DDVVLGSLTEMYVKCGRLEDARGLLDQ 304
+ L AC+ L + G IH V I +G + SL +MY KCG +E A + +
Sbjct: 371 LSILPACAHLGAIDIGRWIH-VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 305 PDERNIISWTSIVSGYAISGRIREARELFNEM 336
+++ SW +++ G+A+ GR + +LF+ M
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y KCG+++ A +F+ + + SWNAM+ + +G + +LF M G+ +
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 144 ITYANVLRSSAEE--LELG 160
IT+ +L + + L+LG
Sbjct: 471 ITFVGLLSACSHSGMLDLG 489
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 528 LEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLA 587
L YAI VFK +++I N+M G + AL+++ M G+ P+ TF +L +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 588 CIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
C K Q + K G L + +I +Y + G +++ ++ P V
Sbjct: 144 CAKSKAFKEGQQIHGHV-LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 648 MLRKIFDKCRKNGYATLG--EWAARRLNEL 675
I GYA+ G E A + +E+
Sbjct: 203 YTALI------KGYASRGYIENAQKLFDEI 226
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 179/629 (28%), Positives = 317/629 (50%), Gaps = 38/629 (6%)
Query: 53 ASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWN 112
+ + +V R + ++ + + N + Y KCG L A +F+ + +D SWN
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 113 AMLGAYTQNGFPGRT---LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLI 169
+++ Y+QNG + ++LF +M + N T A + ++ + V +Q H L+
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 170 VKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAV 229
VK G++ +++SLV Y K ++ D ++F + +N +W+ +V Y G +EA+
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 230 VMFFKMLREDIRPLNFTFANALFACSFLSSPYEGM--QIHGVIIKIDFEGDDVVLGSLTE 287
+F LRE + + S ++ Y G+ QIH + IK G + +L
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
MY KC L EA ++F+ +RN I+W+AM
Sbjct: 265 MYSKCESL-------------------------------NEACKMFDSSGDRNSITWSAM 293
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+ GY+++ EA+ M + T+ +LN C+ + ++ GK++H F+ + +
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
++F + AL+DMY K G L AR F + Q RD W ++++GY + +EEA+ +
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 468 EMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
M+ P+ T ++L AC+++++LE GKQ+H I++ + + V AL +Y+KC
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCG 472
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILL 586
LE VF+ + + DV+ N+MI G HN +G EALE+F M EG++PD +TF I+
Sbjct: 473 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 587 ACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
AC H+G V+ +F+ M + G+ P+++HY CM+ L R G +KE ++F+ + +
Sbjct: 533 ACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGL 592
Query: 647 PMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ R + C+ +G LG +A +L L
Sbjct: 593 CLWRILLSACKNHGKCELGVYAGEKLMAL 621
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 230/462 (49%), Gaps = 38/462 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P +Y+L A +F+ +S ++ R+ + +V +++ + Y K G ++D
Sbjct: 116 PNAYTL-AGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLE---LFLDMNHSGVSANQITYANVLRSSAE 155
+F MPER+ +W+ M+ Y G ++ LFL G ++ + + VL S A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
+ +G+ +Q+H + +K G G V L ++LV Y KC + +A +MFD ++N+++W+ +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V Y G EAV +F +M I+P +T L ACS + EG Q+H ++K+ F
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
E +L +MY K G L DAR D ER++ WTS++SGY + EA L+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
M +I + T+ +L C+ L+ +++G
Sbjct: 414 MKTAGIIP-------------------------------NDPTMASVLKACSSLATLELG 442
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
K+VHG ++ + + + +AL MY KCG+L + F + + +D VSWNA+++G +
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF-RRTPNKDVVSWNAMISGLSH 501
Query: 456 RGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQG 496
GQ +EA+ F EM E P TF +++AC++ +E+G
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 244/515 (47%), Gaps = 36/515 (6%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L +++ L + +HG I++ G + + LV+ Y KC + A +F+ I K+
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80
Query: 210 VSWNVIVRRYLVAG--NGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQI 266
VSWN ++ Y G + V+ F+ +R +DI P +T A A S L S G Q
Sbjct: 81 VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA 140
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
H +++K+ GD V SL MY K G +ED + ERN +W+++VSGYA GR+
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
EA ++FN +FL K +L+
Sbjct: 201 EEAIKVFN-----------------------------LFLREKEEGSDSDYVFTAVLSSL 231
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
A + +G+++H +N + +SNAL+ MY KC +L A F S R+ ++W
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMF-DSSGDRNSITW 290
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIR 505
+A++TGY++ G+S EA+ FS M +PS++T +L AC++I LE+GKQ+H F+++
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 506 NCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEV 565
+E ++ ALV++Y K CL A + F DV + S+I G+ N EAL +
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 566 FGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC 625
+ MK GI P+ T +L AC ++L Q K+G ++ + +Y
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 626 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNG 660
+ G +++ R P N V + NG
Sbjct: 470 KCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNG 503
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 142/294 (48%), Gaps = 11/294 (3%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y++ + C+ + E ++L S L+ +F ++ Y K G L DAR
Sbjct: 319 KPSEYTIVG-VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLR--SSAE 155
FD + ERD W +++ Y QN L L+ M +G+ N T A+VL+ SS
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
LELG KQ+HG +K GF V + S+L Y KC + D +F NK+ VSWN +
Sbjct: 438 TLELG--KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACS---FLSSPYEGMQIHGVIIK 272
+ G G EA+ +F +ML E + P + TF N + ACS F+ + + I
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGR 325
+D + D + ++ + G+L++A+ ++ + + + W ++S G+
Sbjct: 556 LDPKVDH--YACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 22/208 (10%)
Query: 467 SEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCC 526
S Q E P T L + +L G+ +H +IR + LV Y KC
Sbjct: 4 STFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCG 63
Query: 527 CLEYAIRVFKESSSLDVIICNSMILGFCHN---ERGREALEVFGLMKKEGIKPDHITFHG 583
L A +F DV+ NS+I G+ N +++F M+ + I P+ T G
Sbjct: 64 KLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAG 123
Query: 584 ILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY------ECMIKLYCRYGYMKELEDFV 637
I A + +LQ R + ++ ++ + ++ +YC+ G +++
Sbjct: 124 IFKA-------ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF 176
Query: 638 NRMPFNPTVPMLRKIFDKCRKNGYATLG 665
MP T + +GYAT G
Sbjct: 177 AYMPERNTYTWSTMV------SGYATRG 198
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 175/595 (29%), Positives = 311/595 (52%), Gaps = 37/595 (6%)
Query: 80 LNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV 139
L RA+ + ++DA LFDEM + D WN M+ +T G ++ + M +GV
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
A+ TY V++S A L K++H +++K GF +V + +SL+ Y K DA +
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+++ ++ VSWN ++ YL G+G ++++F +ML+ +P F+ +AL ACS + S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
P G +IH ++ E DV++ TSI+
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMV------------------------------MTSILDM 276
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
Y+ G + A +FN M +RN+++WN M+ Y R+ +A F+ + + ++ Q +
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA--FLCFQKMSEQNGLQPDV 334
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+N+ S I G+ +HG+ R + ++ + AL+DMY +CG L+SA + F +M++
Sbjct: 335 ITSINLLPA-SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE 393
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSLEQGK 497
+ + +SWN+++ Y + G++ A+ F E+ W++ P T ++L A A SL +G+
Sbjct: 394 K-NVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
+IH +++++ Y N + +LV +Y C LE A + F DV+ NS+I+ + +
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
GR ++ +F M + P+ TF +L AC G V ++F+SM+ +YGI P +EHY
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRL 672
CM+ L R G + F+ MPF PT + + + R + T+ E+AA ++
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 626
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 228/455 (50%), Gaps = 39/455 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + A ++ E +K+ + ++ V++ N I Y K G DA +F+EMP
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
ERD SWN+M+ Y G +L LF +M G ++ + + L + + + K+
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 165 LHGLIVK-RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
+H V+ R G+V++ +S++D Y K ++ A R+F+ + +N V+WNV++ Y G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 224 NGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
+A + F KM ++ ++P T N L A + L EG IHG ++ F V+
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLE 368
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY +CG+L+ A + D+ E+N+ISW SI++ Y +G+ A ELF E+
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL------ 422
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
W++ L D T+ IL A + G+E+H +I
Sbjct: 423 -WDSSLVP------------------------DSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
++ Y SN + N+L+ MY CG+L AR F + +D VSWN+++ YA G +
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 463 MTSFSEM-QWETRPSKFTFETLLAACANISSLEQG 496
+ FSEM P+K TF +LLAAC+ +++G
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 115/211 (54%)
Query: 55 SKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAM 114
+ AI+E R + + P + L I+ YG+CG L A +FD M E++ SWN++
Sbjct: 343 ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSI 402
Query: 115 LGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGF 174
+ AY QNG LELF ++ S + + T A++L + AE L L +++H IVK +
Sbjct: 403 IAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY 462
Query: 175 CGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFK 234
N I+ +SLV Y C + DAR+ F+ I K+ VSWN I+ Y V G G+ +V +F +
Sbjct: 463 WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSE 522
Query: 235 MLREDIRPLNFTFANALFACSFLSSPYEGMQ 265
M+ + P TFA+ L ACS EG +
Sbjct: 523 MIASRVNPNKSTFASLLAACSISGMVDEGWE 553
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 292 bits (748), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 324/658 (49%), Gaps = 39/658 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ ++ L + C ++ + + + L+ F P L N I Y K G+ A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 99 LFDEM---PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAE 155
+F+ M +RD SW+AM+ Y NG +++F++ G+ N Y V+R+ +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 156 ELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCM-VMTDARRMFDDIQNKNAVSWN 213
+GV + G ++K G F +V + SL+D + K +A ++FD + N V+W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 214 VIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
+++ R + G +EA+ F M+ FT ++ AC+ L + G Q+H I+
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
D V SL +MY KC + G + + R++F
Sbjct: 299 GLVDD--VECSLVDMYAKC----------------------------SADGSVDDCRKVF 328
Query: 334 NEMPERNVISWNAMLAGYTRSL-LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
+ M + +V+SW A++ GY ++ L EA++ F ++ + + + T C LS+
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++GK+V G + +SN V+N+++ M+ K + A+ F +S++ + VS+N L
Sbjct: 389 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLD 447
Query: 452 GYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
G R E+A SE+ + E S FTF +LL+ AN+ S+ +G+QIH V++
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
N AL+ +Y+KC ++ A RVF + +VI SMI GF + LE F M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 571 KEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM 630
+EG+KP+ +T+ IL AC H G V + F+SM + I P++EHY CM+ L CR G +
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 631 KELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+ +F+N MPF V + R CR + LG+ AAR++ EL+P P + +N
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 44/385 (11%)
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ R+L AG+ + AV M R+ IRP++ TF++ L +C G +H +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 274 DFEGDDVVLGSLTEMYVKCG---RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAR 330
D E D V+ SL +Y K G + ED + + +R+++SW+++++ Y +GR +A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 331 ELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLS 390
++F E E ++ + R+ DFV + +VTLG ++
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRAC---SNSDFV--------GVGRVTLGFLM------- 193
Query: 391 EIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN-LRSARIWFYQMSQRRDKVSWNAV 449
K G + S++ V +L+DM+ K N +A F +MS+ + V+W +
Sbjct: 194 --KTGH----------FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE-LNVVTWTLM 240
Query: 450 LTGYARRGQSEEAMTSFSEMQWETRPS-KFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
+T + G EA+ F +M S KFT ++ +ACA + +L GKQ+H + IR+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 509 EINVVCRGALVEVYTKCCC---LEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREALE 564
+V C +LV++Y KC ++ +VF V+ ++I G+ N EA+
Sbjct: 301 VDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 565 VFGLMKKEG-IKPDHITFHGILLAC 588
+F M +G ++P+H TF AC
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 23/301 (7%)
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
ALD + R + +D VT +L C + ++GK VH + D + + N+L+
Sbjct: 48 ALDL--MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 420 MYRKCGNLRSARIWFYQMSQ--RRDKVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPS 476
+Y K G+ A F M + +RD VSW+A++ Y G+ +A+ F E ++ P+
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 477 KFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG-ALVEVYTKC-CCLEYAIRV 534
+ + ++ AC+N + G+ F+++ + + VC G +L++++ K E A +V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 535 FKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNV 594
F + S L+V+ MI REA+ F M G + D T + AC N+
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENL 285
Query: 595 KLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFD 654
L Q S + G++ + EC L D + + +V RK+FD
Sbjct: 286 SLGKQ-LHSWAIRSGLVDDV---EC------------SLVDMYAKCSADGSVDDCRKVFD 329
Query: 655 K 655
+
Sbjct: 330 R 330
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 191/651 (29%), Positives = 314/651 (48%), Gaps = 39/651 (5%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S+++ + ++ A+ + R+L + F V + ++ Y K N D R +FDE
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M ER+ +W ++ Y +N L LF+ M + G N T+A L AEE G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
Q+H ++VK G + + +SL++ Y KC + AR +FD + K+ V+WN ++ Y
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
G EA+ MF+ M +R +FA+ + C+ L Q+H ++K F D +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 283 GSLTEMYVKCGRLEDARGLLDQPD-ERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L Y KC + DA L + N++SWT+++SG+ + EA +LF+EM + V
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++ T +IL +S EVH
Sbjct: 394 RP-------------------------------NEFTYSVILTALPVISP----SEVHAQ 418
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + +Y + V ALLD Y K G + A F + +D V+W+A+L GYA+ G++E
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD-KDIVAWSAMLAGYAQTGETEA 477
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANI-SSLEQGKQIHCFVIRNCYEINVVCRGALV 519
A+ F E+ + +P++FTF ++L CA +S+ QGKQ H F I++ + ++ AL+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+Y K +E A VFK D++ NSMI G+ + + +AL+VF MKK +K D +
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNR 639
TF G+ AC H G V+ ++FD M I P EH CM+ LY R G +++ +
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
MP + R I CR + LG AA ++ + P + + +N +
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 708
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 272/559 (48%), Gaps = 38/559 (6%)
Query: 84 IECYGKCGN--LDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA 141
I C+G + L +A LFD+ P RD S+ ++L ++++G LFL+++ G+
Sbjct: 32 IYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM 91
Query: 142 NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF 201
+ +++VL+ SA + +QLH +K GF +V + +SLVD Y K D R++F
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 202 DDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPY 261
D+++ +N V+W ++ Y E + +F +M E +P +FTFA AL +
Sbjct: 152 DEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 262 EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYA 321
G+Q+H V++K + V SL +Y+KCG + AR L D+ + +++++W S++SGYA
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 322 ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGL 381
+G L EAL + MR + + +
Sbjct: 272 ANG-------------------------------LDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRR 441
++ +CA L E++ +++H + + + + + AL+ Y KC + A F ++
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIH 500
+ VSW A+++G+ + EEA+ FSEM+ + RP++FT+ +L A IS E +H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VH 416
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
V++ YE + AL++ Y K +E A +VF D++ ++M+ G+
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
A+++FG + K GIKP+ TF IL C + F K + L +
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 621 IKLYCRYGYMKELEDFVNR 639
+ +Y + G ++ E+ R
Sbjct: 537 LTMYAKKGNIESAEEVFKR 555
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 289 bits (740), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 179/616 (29%), Positives = 312/616 (50%), Gaps = 44/616 (7%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+++ NR ++ Y K G L A LFDEMP+RD SWN M+ YT G LF M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
SG + +++ +L+ A + +Q+HGL++K G+ NV + SSLVD Y KC + D
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACS 255
A F +I N+VSWN ++ ++ + K A + M ++ + TFA L +
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL---T 211
Query: 256 FLSSPYEG---MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIIS 312
L P Q+H ++K+ GL + I
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKL--------------------------GL-----QHEITI 240
Query: 313 WTSIVSGYAISGRIREARELFNEMP-ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
+++S YA G + +A+ +F+ + +++ISWN+M+AG+++ L + A + M++
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK--CGNLRS 429
+ D T +L+ C+G GK +HG + + +NAL+ MY + G +
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETRPSKFTFETLLAACA 488
A F + + +D +SWN+++TG+A++G SE+A+ FS ++ E + + F LL +C+
Sbjct: 361 ALSLFESL-KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICN 547
++++L+ G+QIH ++ + N +L+ +Y+KC +E A + F++ SS + N
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 548 SMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+MILG+ + G+ +L++F M + +K DH+TF IL AC H G ++ L+ + M
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEW 667
Y I P++EHY + L R G + + ++ + MP NP +L+ CR G +
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599
Query: 668 AARRLNELNPWAPFQF 683
A L E+ P F +
Sbjct: 600 VANHLLEIEPEDHFTY 615
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 211/470 (44%), Gaps = 36/470 (7%)
Query: 166 HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNG 225
H +K G ++ + + ++D+Y K + A +FD++ +++VSWN ++ Y G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 226 KEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
++A +F M R ++F+ L + + G Q+HG++IK +E + V SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
+MY KC R+EDA + E N +SW ++++G+ I+ A L M + ++
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT-- 200
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+D T +L + + K+VH + +
Sbjct: 201 ----------------------------MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
I + NA++ Y CG++ A+ F + +D +SWN+++ G+++ E A
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 466 FSEMQ--WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F +MQ W +T+ LL+AC+ GK +H VI+ E AL+ +Y
Sbjct: 293 FIQMQRHW-VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYI 351
Query: 524 K--CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
+ +E A+ +F+ S D+I NS+I GF +A++ F ++ IK D F
Sbjct: 352 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
+L +C ++L Q ++ K G + +I +Y + G ++
Sbjct: 412 SALLRSCSDLATLQLGQQIH-ALATKSGFVSNEFVISSLIVMYSKCGIIE 460
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 166/348 (47%), Gaps = 18/348 (5%)
Query: 284 SLTEMY-VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
SLT Y +KCG + D I I+ Y G + A LF+EMP+R+ +
Sbjct: 20 SLTHCYAIKCGSISD------------IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSV 67
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI 402
SWN M++GYT ++A M+++ D+D + +L A + +G++VHG +
Sbjct: 68 SWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLV 127
Query: 403 HRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA 462
+ Y N++V ++L+DMY KC + A F ++S+ + VSWNA++ G+ + + A
Sbjct: 128 IKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE-PNSVSWNALIAGFVQVRDIKTA 186
Query: 463 --MTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
+ EM+ TF LL + KQ+H V++ + + A++
Sbjct: 187 FWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMIS 246
Query: 521 VYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
Y C + A RVF S D+I NSMI GF +E A E+F M++ ++ D
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 580 TFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
T+ G+L AC E + ++ + M K G+ +I +Y ++
Sbjct: 307 TYTGLLSACSGEEH-QIFGKSLHGMVIKKGLEQVTSATNALISMYIQF 353
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 184/565 (32%), Positives = 292/565 (51%), Gaps = 41/565 (7%)
Query: 131 FLDMNHSG-VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
L+ HS + A YA++L++ + Q H +VK G + + +SL+ Y
Sbjct: 48 ILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYF 107
Query: 190 KCMV-MTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFA 248
K M + RR+FD K+A+SW ++ Y+ +A+ +F +M+ + FT +
Sbjct: 108 KLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLS 167
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
+A+ ACS L G HGV+I FE + + +L +Y G+ +P
Sbjct: 168 SAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY----------GVNREP--- 214
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+AR +F+EMPE +VI W A+L+ ++++ L++EAL + M
Sbjct: 215 ------------------VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 369 KTTKDI-DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNL 427
+ + D T G +L C L +K GKE+HG + N SN+ V ++LLDMY KCG++
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLAAC 487
R AR F MS +++ VSW+A+L GY + G+ E+A+ F EM+ + F T+L AC
Sbjct: 317 REARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREME---EKDLYCFGTVLKAC 372
Query: 488 ANISSLEQGKQIHC-FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
A ++++ GK+IH +V R C+ NV+ AL+++Y K C++ A RV+ + S ++I
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITW 431
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
N+M+ N RG EA+ F M K+GIKPD+I+F IL AC H G V +F M
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAT-LG 665
YGI P EHY CMI L R G +E E+ + R + + C N A+ +
Sbjct: 492 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVA 551
Query: 666 EWAARRLNELNPWAPFQFKITTNRF 690
E A+R+ EL P + + +N +
Sbjct: 552 ERIAKRMMELEPKYHMSYVLLSNMY 576
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 233/466 (50%), Gaps = 39/466 (8%)
Query: 36 SDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCG-NLD 94
S+ P + LYA L Q C + + + +++V + N + Y K G +
Sbjct: 55 SEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMR 114
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
+ R +FD +D SW +M+ Y + LE+F++M G+ AN+ T ++ +++ +
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACS 174
Query: 155 EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNV 214
E E+ + + HG+++ GF N + S+L YG DARR+FD++ + + W
Sbjct: 175 ELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 215 IVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
++ + +EA+ +F+ M R + + P TF L AC L +G +IHG +I
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
+ VV SL +MY KCG + +AR + + ++N +SW++++ GY +G +A E+F
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
EM E+ D G +L CAGL+ ++
Sbjct: 355 REMEEK-----------------------------------DLYCFGTVLKACAGLAAVR 379
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
+GKE+HG R N+ V +AL+D+Y K G + SA + +MS R+ ++WNA+L+
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI-RNMITWNAMLSAL 438
Query: 454 ARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQ 498
A+ G+ EEA++ F++M + +P +F +L AC + +++G+
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 144/278 (51%), Gaps = 5/278 (1%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S + + C + + + + +++ L+T V + + ++ YGKCG++ +AR +F+
Sbjct: 266 STFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
M +++ SW+A+LG Y QNG + +E+F +M + + VL++ A + +
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLG 381
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K++HG V+RG GNVI+ES+L+D YGK + A R++ + +N ++WN ++
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK-IDFEGDDVV 281
G G+EAV F M+++ I+P +F L AC EG ++ K +
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+ ++ + G E+A LL++ + RN S ++ G
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 294/573 (51%), Gaps = 9/573 (1%)
Query: 126 RTLELFLDMNHSGVSANQITY--ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESS 183
+T L + S VS + + + A++L + + Q+H + G + +L
Sbjct: 24 KTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPK 83
Query: 184 LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPL 243
LV Y + +A+ + ++ + + WNV++ Y +E + + +M+ + IRP
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPD 143
Query: 244 NFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
FT+ + L AC G +HG I ++ V +L MY + + AR L D
Sbjct: 144 AFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFD 203
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEM----PERNVISWNAMLAGYTRSLLWKE 359
+ ER+ +SW ++++ YA G EA ELF++M E +VI+WN + G ++ +
Sbjct: 204 RMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVG 263
Query: 360 ALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLD 419
AL + MR +D V + + L C+ + I++GKE+HG + Y V N L+
Sbjct: 264 ALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLIT 323
Query: 420 MYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKF 478
MY KC +LR A I F Q ++ +WN++++GYA+ +SEEA EM +P+
Sbjct: 324 MYSKCKDLRHALIVFRQ-TEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 479 TFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
T ++L CA I++L+ GK+ HC+++R C++ + +LV+VY K + A +V
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDL 442
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA 597
S D + S+I G+ + G AL +F M + GIKPDH+T +L AC H V
Sbjct: 443 MSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG 502
Query: 598 LQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
+ F M+C+YGI P L+H+ CM+ LY R G++ + +D ++ MP+ P+ + + C
Sbjct: 503 ERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACH 562
Query: 658 KNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+G +G+WAA +L E+ P P + + N +
Sbjct: 563 IHGNTQIGKWAAEKLLEMKPENPGYYVLIANMY 595
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 229/522 (43%), Gaps = 78/522 (14%)
Query: 34 LKSDEPVSYSLYAH----LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
L+S VS L H L C +A + ++ ++ ++ L+ + + Y
Sbjct: 31 LQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSA 90
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
++A+ + + WN ++ +Y +N + + M G+ + TY +V
Sbjct: 91 FNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSV 150
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
L++ E L++ + +HG I + ++ + ++L+ Y + M ARR+FD + ++A
Sbjct: 151 LKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDA 210
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDI----------------------------R 241
VSWN ++ Y G EA +F KM + R
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 242 PLNF-------TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGR 294
NF L ACS + + G +IHG+ I ++G D V +L MY KC
Sbjct: 271 MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKD 330
Query: 295 LEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRS 354
L A + Q +E ++ +W SI+SGYA + EA L EM ++AG+
Sbjct: 331 LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM----------LVAGFQP- 379
Query: 355 LLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND-YSSNIFV 413
+ +TL IL +CA ++ ++ GKE H +I R + +
Sbjct: 380 --------------------NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE- 472
N+L+D+Y K G + +A+ MS +RD+V++ +++ GY +G+ A+ F EM
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG 478
Query: 473 TRPSKFTFETLLAACANISSLEQGK----QIHC-FVIRNCYE 509
+P T +L+AC++ + +G+ ++ C + IR C +
Sbjct: 479 IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQ 520
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 201/497 (40%), Gaps = 75/497 (15%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + C + + R + ++ +++ N I Y + N+ AR LFD M
Sbjct: 147 YPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMF 206
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV--------------- 149
ERD SWNA++ Y G ELF M SGV + IT+ +
Sbjct: 207 ERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALG 266
Query: 150 ----LRSSAEELE----------------LGVSKQLHGLIVKRGFCGNVILESSLVDAYG 189
+R+ L+ + + K++HGL + + G + ++L+ Y
Sbjct: 267 LISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYS 326
Query: 190 KCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFAN 249
KC + A +F + + +WN I+ Y +EA + +ML +P + T A+
Sbjct: 327 KCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLAS 386
Query: 250 ALFACSFLSSPYEGMQIHGVIIKID-FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDER 308
L C+ +++ G + H I++ F+ ++ SL ++Y K G++ A+ + D +R
Sbjct: 387 ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR 446
Query: 309 NIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMR 368
+ +++TS++ GY G A LF EM TRS +
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEM---------------TRSGI------------ 479
Query: 369 KTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSN--ALLDMYRKCG 425
D VT+ +L+ C+ + G+ + F+ +Y + + ++D+Y + G
Sbjct: 480 ----KPDHVTVVAVLSACSHSKLVHEGERL--FMKMQCEYGIRPCLQHFSCMVDLYGRAG 533
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE---EAMTSFSEMQWETRPSKFTFET 482
L A+ + M + +W +L G ++ A EM+ E
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIAN 593
Query: 483 LLAACANISSLEQGKQI 499
+ AA + S L + + I
Sbjct: 594 MYAAAGSWSKLAEVRTI 610
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/649 (27%), Positives = 313/649 (48%), Gaps = 47/649 (7%)
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
K G+L +A +FD MPERD SWN M+ + GF + L ++ M G ++ T A+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD-ARRMFDDIQNK 207
VL + ++ L+ + HG+ VK G N+ + ++L+ Y KC + D R+F+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF------ACSFLSSPY 261
N VS+ ++ EAV MF M + ++ + +N L C LS Y
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 262 E---GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
G QIH + +++ F GD + SL E+Y K + A + + E N++SW ++
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 319 GYAI-----------------------------------SGRIREARELFNEMPERNVIS 343
G+ SG + R +F+ +P+ +V +
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA 383
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIH 403
WNAML+GY+ ++EA+ M+ D+ TL +IL+ CA L ++ GK++HG +
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 404 RNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAM 463
R + S N + + L+ +Y +C + + F D WN++++G+ +A+
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 464 TSFSEMQWETR--PSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEV 521
F M P++ +F T+L++C+ + SL G+Q H V+++ Y + AL ++
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 522 YTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITF 581
Y KC ++ A + F + +I N MI G+ HN RG EA+ ++ M G KPD ITF
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 582 HGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+L AC H G V+ L+ SM+ +GI P+L+HY C++ R G +++ E P
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATP 683
Query: 642 FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+ + + + CR +G +L A +L L+P + + + +N +
Sbjct: 684 YKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 196/409 (47%), Gaps = 18/409 (4%)
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G IHG I+++ + D + L ++Y++CG + AR + D+ R++ SW + ++
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
G + EA E+F+ MPER+V+SWN M++ R ++AL M + TL +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L+ C+ + + G HG + NIFV NALL MY KCG + + ++ + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLA------ACANISSL-- 493
+VS+ AV+ G AR + EA+ F M + + +L+ C ++S +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 494 -EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILG 552
E GKQIHC +R + ++ +L+E+Y K + A +F E ++V+ N MI+G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 553 FCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIP 612
F R +++E M+ G +P+ +T +L AC G+V+ + F S+ P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QP 379
Query: 613 QLEHYECMIKLYCRYGYMKELEDFVNRMPFN---PTVPMLRKIFDKCRK 658
+ + M+ Y Y + +E +M F P L I C +
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 428
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 220/474 (46%), Gaps = 55/474 (11%)
Query: 77 VFLLNRAIECYGKCGNLDD-ARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMN 135
+F+ N + Y KCG + D +F+ + + + S+ A++G + +++F M
Sbjct: 173 IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 136 HSGVSANQITYANVLRSSA--------EEL---ELGVSKQLHGLIVKRGFCGNVILESSL 184
GV + + +N+L SA E+ ELG KQ+H L ++ GF G++ L +SL
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG--KQIHCLALRLGFGGDLHLNNSL 290
Query: 185 VDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLN 244
++ Y K M A +F ++ N VSWN+++ + ++V +M +P
Sbjct: 291 LEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNE 350
Query: 245 FTFANALFACSFLSSPYE-GMQIHGVIIKIDFEGDDVVLG-------------------- 283
T + L AC F S E G +I I + + +L
Sbjct: 351 VTCISVLGAC-FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 284 --------SLTEMYVKCGR---LEDARGLLDQPDERNIISWTSIVSG----YAISGRIRE 328
+L+ + C R LE + + I + IVSG Y+ ++
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 329 ARELFNE-MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI-DQVTLGLILNVC 386
+ +F++ + E ++ WN+M++G+ ++L +AL M +T ++ + +L+ C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 387 AGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSW 446
+ L + G++ HG + ++ Y S+ FV AL DMY KCG + SAR F+ R++ V W
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR-QFFDAVLRKNTVIW 588
Query: 447 NAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
N ++ GY G+ +EA+ + +M +P TF ++L AC++ +E G +I
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 224/515 (43%), Gaps = 124/515 (24%)
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ- 205
A++LR +E K +HG IV+ G + L + L+D Y +C AR++FD++
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 206 ------------------------------NKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
++ VSWN ++ + G ++A+V++ +M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
+ + P FT A+ L ACS + GM+ HGV +K + + V +L MY KCG +
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 296 EDARGL-----LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAG 350
D G+ L QP+E +S+T+++ G A ++ EA ++F M E+ V
Sbjct: 190 VD-YGVRVFESLSQPNE---VSYTAVIGGLARENKVLEAVQMFRLMCEKGV--------- 236
Query: 351 YTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV------CAGLSEI---KMGKEVHGF 401
+D V L IL++ C LSEI ++GK++H
Sbjct: 237 ----------------------QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCL 274
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
R + ++ ++N+LL++Y K ++ A + F +M + + VSWN ++ G+ + +S++
Sbjct: 275 ALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE-VNVVSWNIMIVGFGQEYRSDK 333
Query: 462 AMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
++ + M+ +P++ T ++L AC +E G+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR----------------------- 370
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
R+F V N+M+ G+ + E EA+ F M+ + +KPD T
Sbjct: 371 ------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTT 418
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
IL +C L+F + + +G++ + E
Sbjct: 419 LSVILSSCAR-------LRFLEGGKQIHGVVIRTE 446
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + C+ +++ R+ +V F+ + Y KCG +D AR FD +
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVL 581
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE--LELGVS 162
++ WN M+ Y NG + L+ M SG + IT+ +VL + + +E G+
Sbjct: 582 RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLE 641
Query: 163 -----KQLHGL--IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNV 214
+++HG+ + C +VD G+ + DA ++ + K ++V W +
Sbjct: 642 ILSSMQRIHGIEPELDHYIC--------IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEI 693
Query: 215 IVRRYLVAGNGKEAVVMFFKMLRED 239
++ V G+ A + K++R D
Sbjct: 694 LLSSCRVHGDVSLARRVAEKLMRLD 718
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 301/620 (48%), Gaps = 41/620 (6%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+ ARK+ + P N I + K G++ AR LFD MP+R +W ++G
Sbjct: 64 VSAARKVYDEM----PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGW 119
Query: 118 YTQNGFPGRTLELFLDM--NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
Y +N +LF M + S + +T+ +L + + Q+H VK GF
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 176 GNVILESS--LVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFF 233
N L S L+ +Y + + A +F++I K++V++N ++ Y G E++ +F
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 234 KMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCG 293
KM + +P +FTF+ L A L G Q+H + + F D V + + Y K
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK-- 297
Query: 294 RLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTR 353
R+ E R LF+EMPE + +S+N +++ Y++
Sbjct: 298 -----------------------------HDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 354 SLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV 413
+ ++ +L F M+ D +L++ A LS ++MG+++H S + V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 414 SNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET 473
N+L+DMY KC A + F + QR VSW A+++GY ++G + F++M+
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 474 -RPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAI 532
R + TF T+L A A+ +SL GKQ+H F+IR+ NV LV++Y KC ++ A+
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 533 RVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEG 592
+VF+E + + N++I N G A+ F M + G++PD ++ G+L AC H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 593 NVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKI 652
V+ ++F +M YGI P+ +HY CM+ L R G E E ++ MPF P M +
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 653 FDKCRKNGYATLGEWAARRL 672
+ CR + +L E AA +L
Sbjct: 628 LNACRIHKNQSLAERAAEKL 647
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 169/337 (50%), Gaps = 18/337 (5%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
+A + + A+ ++ R+L + + + N ++ Y KC ++A +F +P
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQ 164
+R SW A++ Y Q G G L+LF M S + A+Q T+A VL++SA L + KQ
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN 224
LH I++ G NV S LVD Y KC + DA ++F+++ ++NAVSWN ++ + G+
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 225 GKEAVVMFFKMLREDIRPLNFTFANALFACS---FLSSPYEGMQ----IHGVIIKIDFEG 277
G+ A+ F KM+ ++P + + L ACS F+ E Q I+G+ K
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH-- 591
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQ-PDERNIISWTSIVSGYAI----SGRIREAREL 332
+ ++ + GR +A L+D+ P E + I W+S+++ I S R A +L
Sbjct: 592 ----YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
F+ R+ ++ +M Y + W++ D MR+
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/518 (21%), Positives = 223/518 (43%), Gaps = 73/518 (14%)
Query: 162 SKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLV 221
++++ I+K GF + + +V+ + ++ AR+++D++ +KN VS N ++ ++
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 222 AGNGKEAVVMF---------------------------FKMLREDIR------PLNFTFA 248
G+ A +F FK+ R+ R P + TF
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 249 NALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGS--LTEMYVKCGRLEDARGLLDQPD 306
L C+ Q+H +K+ F+ + + S L + Y + RL+ A L ++
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 307 ERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFL 366
E++ +++ ++++GY G L+ E++
Sbjct: 212 EKDSVTFNTLITGYEKDG-------------------------------LYTESIHLFLK 240
Query: 367 MRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGN 426
MR++ T +L GL + +G+++H +S + V N +LD Y K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR 300
Query: 427 LRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ---WETRPSKFTFETL 483
+ R+ F +M + D VS+N V++ Y++ Q E ++ F EMQ ++ R F F T+
Sbjct: 301 VLETRMLFDEMPE-LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR--NFPFATM 357
Query: 484 LAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDV 543
L+ AN+SSL+ G+Q+HC + + + +LV++Y KC E A +FK
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 544 IICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDS 603
+ ++I G+ L++F M+ ++ D TF +L A ++ L Q +
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH-A 476
Query: 604 MRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ G + + ++ +Y + G +K+ MP
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 178/390 (45%), Gaps = 13/390 (3%)
Query: 265 QIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISG 324
++ IIK F+ D + E ++ G++ AR + D+ +N +S +++SG+ +G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 325 RIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI--DQVTLGLI 382
+ AR+LF+ MP+R V++W ++ Y R+ + EA M +++ D VT +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIF--VSNALLDMYRKCGNLRSARIWFYQMSQR 440
L C +VH F + + +N F VSN LL Y + L A + F ++ +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE- 212
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQI 499
+D V++N ++TGY + G E++ F +M Q +PS FTF +L A + G+Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
H + + + +++ Y+K + +F E LD + N +I + ++
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ---LEH 616
+L F M+ G + F +L + ++++ Q + C+ + L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ----LHCQALLATADSILHV 388
Query: 617 YECMIKLYCRYGYMKELEDFVNRMPFNPTV 646
++ +Y + +E E +P TV
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 24 KTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRA 83
K TK +L++D+ S +A + + AS +++ ++L + ++ VF +
Sbjct: 438 KLFTKMRGSNLRADQ----STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
++ Y KCG++ DA +F+EMP+R+ SWNA++ A+ NG + F M SG+ +
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Query: 144 ITYANVL 150
++ VL
Sbjct: 554 VSILGVL 560
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 320/641 (49%), Gaps = 36/641 (5%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S L + L + S+K++ + + ++T V L I Y C + AR +F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 101 DEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRSSAEELE 158
+ R D WN+++ Y++N TLE+F + N S + T+ NV+++
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
+ + +H L+VK G+ +V++ SSLV Y K + ++ ++FD++ ++ SWN ++
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ +G ++A+ +F +M P + + A+ ACS L G +IH +K FE D
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+ V +L +MY KC LE ARE+F +MP
Sbjct: 243 EYVNSALVDMYGKCDCLE-------------------------------VAREVFQKMPR 271
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+++++WN+M+ GY K ++ + M Q TL IL C+ + GK +
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
HG++ R+ +++I+V+ +L+D+Y KCG A F + +Q+ SWN +++ Y G
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVGN 390
Query: 459 SEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGA 517
+A+ + +M +P TF ++L AC+ +++LE+GKQIH + + E + + A
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPD 577
L+++Y+KC + A R+F DV+ MI + + + REAL F M+K G+KPD
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Query: 578 HITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFV 637
+T +L AC H G + L+FF MR KYGI P +EHY CMI + R G + E + +
Sbjct: 511 GVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Query: 638 NRMP-FNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ P + +L +F C + +LG+ AR L E P
Sbjct: 571 QQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYP 611
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/643 (28%), Positives = 318/643 (49%), Gaps = 46/643 (7%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLV--TFYPTPPVFLLNRAIECYGKCGNLDDARGLFD 101
++ L + C S+ +V + + +L+ + + L+N Y C ++ AR +FD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLT-RLYASCNEVELARHVFD 59
Query: 102 EMPER--DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELEL 159
E+P + +W+ M+ AY N F + L+L+ M +SGV + TY VL++ A +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 160 GVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRY 219
K +H + F ++ + ++LVD Y KC + A ++FD++ ++ V+WN ++ +
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 220 LVAGNGKEAVVMFFKMLREDIRPLNFTFANALF-ACSFLSSPYEGMQIHGVIIKIDFEGD 278
+ + + +F M R D N + +F A + EG +HG ++ F D
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
VV T I+ YA S I AR +F+ +
Sbjct: 240 LVV-------------------------------KTGILDVYAKSKCIIYARRVFDLDFK 268
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVF--LMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+N ++W+AM+ GY + + KEA + F L+ + V +GLIL CA ++ G+
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ--RRDKVSWNAVLTGYA 454
VH + + + ++ V N ++ Y K G+L A F Q S+ +D +S+N+++TG
Sbjct: 329 CVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA---FRQFSEIGLKDVISYNSLITGCV 385
Query: 455 RRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVV 513
+ EE+ F EM+ RP T +L AC+++++L G H + + + Y +N
Sbjct: 386 VNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTS 445
Query: 514 CRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEG 573
AL+++YTKC L+ A RVF D++ N+M+ GF + G+EAL +F M++ G
Sbjct: 446 ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG 505
Query: 574 IKPDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ PD +T IL AC H G V Q F+SM R + +IP+++HY CM L R GY+ E
Sbjct: 506 VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDE 565
Query: 633 LEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
DFVN+MPF P + +L + C A LG ++++ L
Sbjct: 566 AYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL 608
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 226/468 (48%), Gaps = 43/468 (9%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P Y+ Y + + CA +AI + + + S++ +++ ++ Y KCG L+ A
Sbjct: 101 PTKYT-YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 99 LFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEEL 157
+FDEMP+RD +WNAM+ ++ + + LFLDM G+S N T + +
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L K +HG + GF ++++++ ++D Y K + ARR+FD KN V+W+ ++
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 218 RYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
Y+ KEA +FF+ML D + P+ L C+ G +H +K
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKA 337
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
F D V ++ Y K G L DA + +++IS+ S+++G ++ R E+ LF
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIK 393
+E MR + D TL +L C+ L+ +
Sbjct: 398 HE-------------------------------MRTSGIRPDITTLLGVLTACSHLAALG 426
Query: 394 MGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGY 453
G HG+ + Y+ N + NAL+DMY KCG L A+ F M +RD VSWN +L G+
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGF 485
Query: 454 ARRGQSEEAMTSFSEMQWET--RPSKFTFETLLAACANISSLEQGKQI 499
G +EA++ F+ MQ ET P + T +L+AC++ +++GKQ+
Sbjct: 486 GIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQL 532
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K G+L DA F E+ +D S+N+++ N P + LF +M SG+
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+ T VL + + LG HG V G+ N + ++L+D Y KC + A+R+
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV 466
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + ++ VSWN ++ + + G GKEA+ +F M + P T L ACS
Sbjct: 467 FDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLV 526
Query: 261 YEGMQIHGVIIKIDFEGDDVV--LGSLTEMYVKCGRLEDARGLLD----QPDERNIISWT 314
EG Q+ + + DF + +T++ + G L++A ++ +PD R + +
Sbjct: 527 DEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLL 586
Query: 315 SIVSGYA---ISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
S Y + + + + E E V+ N Y+ + W++A + +K
Sbjct: 587 SACWTYKNAELGNEVSKKMQSLGETTESLVLLSNT----YSAAERWEDAARIRMIQKK 640
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/585 (30%), Positives = 294/585 (50%), Gaps = 43/585 (7%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVK 171
N L Y +G L+ F DM S V +Q+T+ +L ++ + L + +Q+H + +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 172 RGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVM 231
G + + +SL++ Y K AR +FD++ ++ +SWN ++ G EAV +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 232 FFKMLREDIRPLNFTFANALFACSFLSSPYEGM----QIHGVIIKIDFEGDDVVLGSLTE 287
F ++LR ++P +T + L A S L EG+ Q+H IKI+ D V
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSLSKQVHVHAIKINNVSDSFV------ 454
Query: 288 MYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAM 347
T+++ Y+ + ++EA LF E ++++WNAM
Sbjct: 455 -------------------------STALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAM 488
Query: 348 LAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDY 407
+AGYT+S + L LM K + D TL + C L I GK+VH + ++ Y
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 408 SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS 467
+++VS+ +LDMY KCG++ +A+ F + D V+W +++G G+ E A FS
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTMISGCIENGEEERAFHVFS 607
Query: 468 EMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKC 525
+M+ P +FT TL A + +++LEQG+QIH ++ NC V +LV++Y KC
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT-SLVDMYAKC 666
Query: 526 CCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGIL 585
++ A +FK +++ N+M++G + G+E L++F MK GIKPD +TF G+L
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 586 LACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPT 645
AC H G V A + SM YGI P++EHY C+ R G +K+ E+ + M +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 646 VPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
M R + CR G G+ A +L EL P + + +N +
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMY 831
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 260/572 (45%), Gaps = 47/572 (8%)
Query: 54 SSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNA 113
+S ++ + + ++TF P FL+N I Y KCG+L AR +FD+MP+RD SWN+
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 114 MLGAYTQNG-----FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+L AY Q+ + LF + V +++T + +L+ + S+ HG
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
K G G+ + +LV+ Y K + + + +F+++ ++ V WN++++ YL G +EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 229 VVMFFKMLREDIRPLNFT-------------------FANA---------LFACSFLSSP 260
+ + + P T FAN +F LS
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 261 YEGMQIHGVI------IKIDFEGDDVVLGSLTEMYVKCGRLEDARGL----LDQPDERNI 310
Q ++ ++ D E D V + VK L + + L + +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
S+++ Y + AR +F+ M ER++ISWN+++AG ++ L EA+ + +
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 371 TKDIDQVTLGLILNVCAGLSE-IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
DQ T+ +L + L E + + K+VH + + S+ FVS AL+D Y + ++
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACA 488
A I F + D V+WNA++ GY + + + F+ M + R FT T+ C
Sbjct: 471 AEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ ++ QGKQ+H + I++ Y++++ ++++Y KC + A F D + +
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 549 MILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
MI G N A VF M+ G+ PD T
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 205/411 (49%), Gaps = 35/411 (8%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I Y K AR +FD M ERD SWN+++ QNG + LF+ + G+
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 141 ANQITYANVLRSSAEELE-LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARR 199
+Q T +VL++++ E L +SKQ+H +K + + ++L+DAY + M +A
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 200 MFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSS 259
+F+ N + V+WN ++ Y + +G + + +F M ++ R +FT A C FL +
Sbjct: 474 LFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 260 PYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSG 319
+G Q+H IK ++ D V + +MYVKCG + A+ D + ++WT+++SG
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 320 YAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTL 379
+G A +F++M V+ D+ T+
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLP-------------------------------DEFTI 621
Query: 380 GLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
+ + L+ ++ G+++H + + +++ FV +L+DMY KCG++ A F ++ +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI-E 680
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACAN 489
+ +WNA+L G A+ G+ +E + F +M+ +P K TF +L+AC++
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 227/485 (46%), Gaps = 49/485 (10%)
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
LR++ +L + K H I+ L ++L+ Y KC +T ARR+FD + +++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 210 VSWNVIVRRYL-----VAGNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEG 263
VSWN I+ Y V N ++A ++F ++LR+D+ T + L C +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
HG KI +GD+ V G+L +Y+K G++++ + L ++ R+++ W ++ Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 324 GRIREARELF----------NEMPER----------------------------NVISWN 345
G EA +L NE+ R +I N
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRN 284
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
L+ Y S + L M ++ + DQVT L+L + + +G++VH +
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 406 DYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTS 465
+ VSN+L++MY K AR F MS+ RD +SWN+V+ G A+ G EA+
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE-RDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 466 FSE-MQWETRPSKFTFETLLAACANI-SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYT 523
F + ++ +P ++T ++L A +++ L KQ+H I+ + AL++ Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 524 KCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHG 583
+ C++ A +F E + D++ N+M+ G+ + G + L++F LM K+G + D T
Sbjct: 464 RNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 584 ILLAC 588
+ C
Sbjct: 523 VFKTC 527
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 160/327 (48%), Gaps = 5/327 (1%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P Y++ + L + + + ++++ + + F+ I+ Y + + +A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LF E D +WNAM+ YTQ+ +TL+LF M+ G ++ T A V ++
Sbjct: 473 ILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
+ KQ+H +K G+ ++ + S ++D Y KC M+ A+ FD I + V+W ++
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
+ G + A +F +M + P FT A A S L++ +G QIH +K++
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D V SL +MY KCG ++DA L + + NI +W +++ G A G +E +LF +M
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 338 ERNV----ISWNAMLAGYTRSLLWKEA 360
+ +++ +L+ + S L EA
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEA 738
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 158/362 (43%), Gaps = 46/362 (12%)
Query: 284 SLTEMYVKCGRLEDARGL-LDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
++T + G+ AR L ++ ER +I+ +++S Y+ G + AR +F++MP+R+++
Sbjct: 49 AITSSDLMLGKCTHARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 343 SWNAMLAGYTRSLL-----WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
SWN++LA Y +S ++A ++R+ ++TL +L +C + +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 398 VHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRG 457
HG+ + + FV+ AL+++Y K G ++ ++ F +M RD V WN +L Y G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKAYLEMG 225
Query: 458 QSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRG 516
EEA+ S P++ T L + S Q+ F N
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS---DAGQVKSFANGN---------- 272
Query: 517 ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKP 576
SS ++I N + + H+ + L+ F M + ++
Sbjct: 273 -------------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 577 DHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYC---RYGYMKEL 633
D +TF +L + ++ L Q M K G+ L +I +YC ++G+ + +
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVH-CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 634 ED 635
D
Sbjct: 373 FD 374
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 518 LVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF-----CHNERGREALEVFGLMKKE 572
L+ +Y+KC L YA RVF + D++ NS++ + C E ++A +F +++++
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 573 GIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE 632
+ +T +L C+H G V A + F CK G+ ++ +Y ++G +KE
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 633 LEDFVNRMPFNPTV 646
+ MP+ V
Sbjct: 199 GKVLFEEMPYRDVV 212
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/602 (29%), Positives = 307/602 (50%), Gaps = 34/602 (5%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ + I+ Y + G +D LFD + ++D WN ML Y + G ++ F M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+S N +T+ VL A +L + + QLHGL+V G +++SL+ Y KC DA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F + + V+WN ++ Y+ +G +E++ F++M+ + P TF++ L + S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ QIH I++ D + +L + Y KC RG
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC------RG----------------- 390
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
+ A+ +F++ +V+ + AM++GY + L+ ++L+ + K +++
Sbjct: 391 --------VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQM 437
TL IL V L +K+G+E+HGFI + + + + A++DMY KCG + A F ++
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 438 SQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSK-FTFETLLAACANISSLEQG 496
S +RD VSWN+++T A+ A+ F +M + L+ACAN+ S G
Sbjct: 503 S-KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 497 KQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN 556
K IH F+I++ +V L+++Y KC L+ A+ VFK +++ NS+I ++
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 557 ERGREALEVFG-LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLE 615
+ +++L +F +++K GI+PD ITF I+ +C H G+V ++FF SM YGI PQ E
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
HY C++ L+ R G + E + V MPF P + + CR + L E A+ +L +L
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDL 741
Query: 676 NP 677
+P
Sbjct: 742 DP 743
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 204/426 (47%), Gaps = 35/426 (8%)
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD--DIQNKNAVSWNVIVRRYL 220
KQ+H ++ G+ + ++ Y C +D +MF D++ + WN I+ ++
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFV 114
Query: 221 VAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
G +A+ +FKML + P TF + AC L +F+G D
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK---------------NFKGIDF 159
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
+ +++ + + C N +S++ Y G+I +LF+ + +++
Sbjct: 160 LSDTVSSLGMDC----------------NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
+ WN ML GY + + +MR + VT +L+VCA I +G ++HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
+ + + N+LL MY KCG A F MS R D V+WN +++GY + G E
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISGYVQSGLME 322
Query: 461 EAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALV 519
E++T F EM P TF +LL + + +LE KQIHC+++R+ +++ AL+
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 520 EVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHI 579
+ Y KC + A +F + +S+DV++ +MI G+ HN ++LE+F + K I P+ I
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 580 TFHGIL 585
T IL
Sbjct: 443 TLVSIL 448
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 151/625 (24%), Positives = 282/625 (45%), Gaps = 57/625 (9%)
Query: 15 KSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPT 74
KS P S+ L +TI P SL L Q C++ + + +++ + L+ +
Sbjct: 19 KSLPLRNSSRFLEETI--------PRRLSL---LLQACSNPNLLRQGKQVHAFLIVNSIS 67
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGG--SWNAMLGAYTQNGFPGRTLELFL 132
+ R + Y CG+ D +F + R WN+++ ++ +NG + L +
Sbjct: 68 GDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYF 127
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M GVS + T+ ++++ L + G N + SSL+ AY +
Sbjct: 128 KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG 187
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANAL 251
+ ++FD + K+ V WNV++ Y G ++V+ F ++R D I P TF L
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG-ALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 252 FACSFLSSPYEGMQIHGVII--KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERN 309
C+ G+Q+HG+++ +DFEG + SL MY KCGR +DA L +
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 310 IISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRK 369
++W ++SGY SG + E+ F EM V+
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP-------------------------- 338
Query: 370 TTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRS 429
D +T +L + ++ K++H +I R+ S +IF+++AL+D Y KC +
Sbjct: 339 -----DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 430 ARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACA 488
A+ F Q + D V + A+++GY G +++ F + + + P++ T ++L
Sbjct: 394 AQNIFSQCNS-VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 489 NISSLEQGKQIHCFVIRNCYE--INVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIIC 546
+ +L+ G+++H F+I+ ++ N+ C A++++Y KC + A +F+ S D++
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGC--AVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 547 NSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC 606
NSMI ++ A+++F M GI D ++ L AC + + M
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM-I 569
Query: 607 KYGIIPQLEHYECMIKLYCRYGYMK 631
K+ + + +I +Y + G +K
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLK 594
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 139/266 (52%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+FL + I+ Y KC + A+ +F + D + AM+ Y NG +LE+F +
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Query: 137 SGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTD 196
+S N+IT ++L L L + ++LHG I+K+GF + +++D Y KC M
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 197 ARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSF 256
A +F+ + ++ VSWN ++ R + N A+ +F +M I + + AL AC+
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
L S G IHG +IK D +L +MY KCG L+ A + E+NI+SW SI
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 317 VSGYAISGRIREARELFNEMPERNVI 342
++ G+++++ LF+EM E++ I
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGI 640
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 278 bits (712), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 188/657 (28%), Positives = 317/657 (48%), Gaps = 46/657 (7%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMP 104
Y + + CA + + +V VF+ N + YG G + DA LFD MP
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 105 ERDGGSWNAMLGAYTQNGFPGRTLELFLDM---NHSGVSANQI-TYANVLRSSAEELELG 160
ER+ SWN+M+ ++ NGF + L +M N G + T VL A E E+G
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYL 220
+ K +HG VK ++L ++L+D Y KC +T+A+ +F NKN VSWN +V +
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 221 VAGNGKEAVVMFFKMLR--EDIRPLNFTFANALFAC---SFLSSPYEGMQIHGVIIKIDF 275
G+ + +ML ED++ T NA+ C SFL S E +H +K +F
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE---LHCYSLKQEF 426
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
+++V + Y KCG L A+ +F+
Sbjct: 427 VYNELVANAFVASYAKCGSLS-------------------------------YAQRVFHG 455
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
+ + V SWNA++ G+ +S + +LD M+ + D T+ +L+ C+ L +++G
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
KEVHGFI RN ++FV ++L +Y CG L + + F M + + VSWN V+TGY +
Sbjct: 516 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQ 574
Query: 456 RGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G + A+ F +M + + + + AC+ + SL G++ H + +++ E +
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
+L+++Y K + + +VF N+MI+G+ + +EA+++F M++ G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYM-KEL 633
PD +TF G+L AC H G + L++ D M+ +G+ P L+HY C+I + R G + K L
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 634 EDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
M V + + + CR + +GE A +L EL P P + + +N +
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLY 811
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 257/518 (49%), Gaps = 40/518 (7%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHS 137
L R I Y CG+ DD+R +FD + ++ WNA++ +Y++N LE F++M + +
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ + TY V+++ A ++G+ +HGL+VK G +V + ++LV YG +TDA
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED----IRPLNFTFANALFA 253
++FD + +N VSWN ++R + G +E+ ++ +M+ E+ P T L
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 254 CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISW 313
C+ G +HG +K+ + + V+ +L +MY KCG + +A+ + + +N++SW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 314 TSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD 373
++V G++ G ++ + MLAG +D
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQ-----------MLAG--------------------GED 390
Query: 374 I--DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
+ D+VT+ + VC S + KE+H + + ++ N V+NA + Y KCG+L A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANI 490
F+ + + SWNA++ G+A+ ++ + +M+ P FT +LL+AC+ +
Sbjct: 451 RVFHGIRSKTVN-SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
SL GK++H F+IRN E ++ +++ +Y C L +F ++ N++I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 551 LGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
G+ N AL VF M GI+ I+ + AC
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 217/449 (48%), Gaps = 41/449 (9%)
Query: 149 VLRSSAEELELGVSKQLHGLIVKRGFCGNV-ILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+L++S + ++ + +++H L+ N +L + ++ Y C D+R +FD +++K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI 266
N WN ++ Y E + F +M+ D+ P +FT+ + AC+ +S G+ +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG++ VK G +ED + ++VS Y G +
Sbjct: 210 HGLV-------------------VKTGLVED------------VFVGNALVSFYGTHGFV 238
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKD----IDQVTLGLI 382
+A +LF+ MPERN++SWN+M+ ++ + +E+ + M + D D TL +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L VCA EI +GK VHG+ + + ++NAL+DMY KCG + +A++ F +M+ ++
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKN 357
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM---QWETRPSKFTFETLLAACANISSLEQGKQI 499
VSWN ++ G++ G + +M + + + T + C + S L K++
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERG 559
HC+ ++ + N + A V Y KC L YA RVF S V N++I G +
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 560 REALEVFGLMKKEGIKPDHITFHGILLAC 588
R +L+ MK G+ PD T +L AC
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 209/468 (44%), Gaps = 56/468 (11%)
Query: 30 ISGHLKSDEPVSYSLYAHL-----------------FQLCASSKAIVEARKLESNLVTFY 72
I GH +S++P SL AHL C+ K++ +++ ++ +
Sbjct: 468 IGGHAQSNDP-RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 73 PTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFL 132
+F+ + Y CG L + LFD M ++ SWN ++ Y QNGFP R L +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 133 DMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCM 192
M G+ I+ V + + L + ++ H +K + + SL+D Y K
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 193 VMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALF 252
+T + ++F+ ++ K+ SWN ++ Y + G KEA+ +F +M R P + TF L
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706
Query: 253 ACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL--DQPDERN 309
AC+ +EG++ + + + + + +M + G+L+ A ++ + +E +
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 310 IISWTSIVSGYAISGRI----REARELFNEMPER--NVISWNAMLAGYTRSLLWKEALDF 363
+ W S++S I + + A +LF PE+ N + + + AG + W++
Sbjct: 767 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGK---WED---- 819
Query: 364 VFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRK 423
+RK + +++++ L AG S I++ ++V F+ V LD + +
Sbjct: 820 ---VRKVRQRMNEMS----LRKDAGCSWIELNRKVFSFV----------VGERFLDGFEE 862
Query: 424 CGNLRSA-RIWFYQMSQRRDKVSWNAVLTGYAR----RGQSEEAMTSF 466
+L S + +M R D +S L+ + RG SE+ ++
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 910
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 16/231 (6%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIH-----RNDYSSNIFVSNALLDMYRKCGNLRSARI 432
LGL+L +I+MG+++H + RND + ++ MY CG+ +R
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD----VLCTRIITMYAMCGSPDDSRF 141
Query: 433 WFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANI 490
F + + ++ WNAV++ Y+R +E + +F EM T P FT+ ++ ACA +
Sbjct: 142 VFDAL-RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200
Query: 491 SSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMI 550
S + G +H V++ +V ALV Y + A+++F +++ NSMI
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 551 LGFCHNERGREALEVFGLMKKE----GIKPDHITFHGILLACIHEGNVKLA 597
F N E+ + G M +E PD T +L C E + L
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 483 LLAACANISSLEQGKQIHCFV-----IRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE 537
LL A +E G++IH V +RN +V+C ++ +Y C + + VF
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRN---DDVLCT-RIITMYAMCGSPDDSRFVFDA 145
Query: 538 SSSLDVIICNSMILGFCHNERGREALEVF-GLMKKEGIKPDHITFHGILLACIHEGNVKL 596
S ++ N++I + NE E LE F ++ + PDH T+ ++ AC +V +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
L + K G++ + ++ Y +G++ + + MP
Sbjct: 206 GLA-VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 182/669 (27%), Positives = 324/669 (48%), Gaps = 41/669 (6%)
Query: 27 TKTISGHLKSDEPVSYSLYAH----LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNR 82
KT + L+S + + L +H + + C + A+ + +++ +F N
Sbjct: 30 VKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNI 89
Query: 83 AIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSAN 142
+ Y K G DA LFDEMPER+ S+ + Y G L+ ++ G N
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIG----LYSRLHREGHELN 145
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
+ + L+ + + LH IVK G+ N + ++L++AY C + AR +F+
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE 205
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I K+ V W IV Y+ G ++++ + M P N+TF AL A L +
Sbjct: 206 GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
+HG I+K + D V L ++Y + G + DA
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF----------------------- 302
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
++FNEMP+ +V+ W+ M+A + ++ EA+D MR+ ++ TL I
Sbjct: 303 --------KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
LN CA +G+++HG + + + +I+VSNAL+D+Y KC + +A F ++S + +
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-N 413
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHC 501
+VSWN V+ GY G+ +A + F E ++ + ++ TF + L ACA+++S++ G Q+H
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGRE 561
I+ V +L+++Y KC +++A VF E ++DV N++I G+ + GR+
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 562 ALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMI 621
AL + +MK KP+ +TF G+L C + G + + F+SM +GI P LEHY CM+
Sbjct: 534 ALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 622 KLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPF 681
+L R G + + + +P+ P+V + R + +A + ++NP
Sbjct: 594 RLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEA 653
Query: 682 QFKITTNRF 690
+ + +N +
Sbjct: 654 TYVLVSNMY 662
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 240/532 (45%), Gaps = 57/532 (10%)
Query: 120 QNGFPGRTLELFLDMNHSGVSA-NQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV 178
Q GF +T L L+ + S + + Y +LR ++ + +K +H I+K+G C ++
Sbjct: 25 QCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE 238
+ L++AY K DA +FD++ +N VS+ + + Y ++ + ++ ++ RE
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHRE 140
Query: 239 --DIRPLNFTFANALFA-------CSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMY 289
++ P FT LF C +L SP I+K+ ++ + V +L Y
Sbjct: 141 GHELNPHVFTSFLKLFVSLDKAEICPWLHSP---------IVKLGYDSNAFVGAALINAY 191
Query: 290 VKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLA 349
CG ++ AR + + ++I+ W IVS Y +G ++ +L + M +A
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM----------RMA 241
Query: 350 GYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS 409
G+ + T L GL K VHG I + Y
Sbjct: 242 GFMP---------------------NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 410 NIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM 469
+ V LL +Y + G++ A F +M + D V W+ ++ + + G EA+ F M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 470 QWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCL 528
+ P++FT ++L CA G+Q+H V++ +++++ AL++VY KC +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 529 EYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLAC 588
+ A+++F E SS + + N++I+G+ + G +A +F + + +TF L AC
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 589 IHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
++ L +Q + K ++ +I +Y + G +K + N M
Sbjct: 460 ASLASMDLGVQVH-GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 287/544 (52%), Gaps = 36/544 (6%)
Query: 135 NHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVM 194
+SG+ ++ YA+++ S+ + +L KQ+H ++ G + L + L+ A +
Sbjct: 14 TNSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69
Query: 195 TDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFAC 254
T AR++FDD+ WN I+R Y + ++A++M+ M + P +FTF + L AC
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 255 SFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
S LS G +H + ++ F+ D V L +Y KC RL AR
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR--------------- 174
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
++ G +PER ++SW A+++ Y ++ EAL+ MRK
Sbjct: 175 TVFEGLP--------------LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D V L +LN L ++K G+ +H + + + +L MY KCG + +A+I F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M + + + WNA+++GYA+ G + EA+ F EM + RP + + ++ACA + SL
Sbjct: 281 DKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
EQ + ++ +V R+ Y +V AL++++ KC +E A VF + DV++ ++MI+G+
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+ R REA+ ++ M++ G+ P+ +TF G+L+AC H G V+ FF+ M + I PQ
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQ 458
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY C+I L R G++ + + + MP P V + + C+K+ + LGE+AA++L
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 674 ELNP 677
++P
Sbjct: 519 SIDP 522
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 234/459 (50%), Gaps = 38/459 (8%)
Query: 41 SYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLF 100
S S YA L A+ KA + +++ + L+ FL+ + I G++ AR +F
Sbjct: 20 SDSFYASLID-SATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 101 DEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELG 160
D++P WNA++ Y++N L ++ +M + VS + T+ ++L++ + L
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 161 VSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD--IQNKNAVSWNVIVRR 218
+ + +H + + GF +V +++ L+ Y KC + AR +F+ + + VSW IV
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G EA+ +F +M + D++P + L A + L +G IH ++K+ E +
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
+L SL MY KCG++ A+ L D+ N+I W +++SGYA +G REA ++F+EM
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
++V D +++ ++ CA + ++ + +
Sbjct: 317 KDVRP-------------------------------DTISITSAISACAQVGSLEQARSM 345
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
+ ++ R+DY ++F+S+AL+DM+ KCG++ AR+ F + RD V W+A++ GY G+
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF-DRTLDRDVVVWSAMIVGYGLHGR 404
Query: 459 SEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQG 496
+ EA++ + M+ P+ TF LL AC + + +G
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 157/305 (51%), Gaps = 3/305 (0%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P S++ + HL + C+ + R + + + VF+ N I Y KC L AR
Sbjct: 117 PDSFT-FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 99 LFD--EMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEE 156
+F+ +PER SW A++ AY QNG P LE+F M V + + +VL +
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 157 LELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+L + +H +VK G L SL Y KC + A+ +FD +++ N + WN ++
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
Y G +EA+ MF +M+ +D+RP + +A+ AC+ + S + ++ + + D+
Sbjct: 296 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D + +L +M+ KCG +E AR + D+ +R+++ W++++ GY + GR REA L+ M
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 337 PERNV 341
V
Sbjct: 416 ERGGV 420
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
Y KCG + A+ LFD+M + WNAM+ Y +NG+ +++F +M + V + I+
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+ + + A+ L ++ ++ + + + +V + S+L+D + KC + AR +FD +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
++ V W+ ++ Y + G +EA+ ++ M R + P + TF L AC+ EG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLD-QPDERNIISWTSIVSG 319
+ + ++ + G L+ A ++ P + + W +++S
Sbjct: 447 FNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 276 bits (706), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 182/677 (26%), Positives = 317/677 (46%), Gaps = 39/677 (5%)
Query: 18 PKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPV 77
P+ T+ + I + Y+ + F L + I R+ L +
Sbjct: 17 PRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDI 76
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
+ + + YG G DAR +FD++PE D W ML Y N ++L+ +
Sbjct: 77 SIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKH 136
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
G + I ++ L++ E +L K++H +VK NV+L + L+D Y KC + A
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSA 195
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
++F+DI +N V W ++ Y+ +E +V+F +M ++ +T+ + AC+ L
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
S+ ++G HG ++K E ++ SL +MYVKCG
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD----------------------- 292
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
I AR +FNE +++ W AM+ GYT + EAL M+ + V
Sbjct: 293 --------ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 378 TLGLILNVCAGLSEIKMGKEVHGF-IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
T+ +L+ C + +++G+ VHG I + +N V+NAL+ MY KC R A+ + ++
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAK-YVFE 401
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQ 495
M +D V+WN++++G+++ G EA+ F M E+ P+ T +L +ACA++ SL
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 496 GKQIHCFVIRNCY--EINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
G +H + ++ + +V AL++ Y KC + A +F + I ++MI G+
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
+LE+F M K+ KP+ TF IL AC H G V ++F SM Y P
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLN 673
+HY CM+ + R G +++ D + +MP P V C + LGE +++
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 674 ELNPWAPFQFKITTNRF 690
+L+P + + +N +
Sbjct: 642 DLHPDDASYYVLVSNLY 658
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 140/484 (28%), Positives = 229/484 (47%), Gaps = 43/484 (8%)
Query: 122 GFPGRTL------ELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFC 175
GFP R + EL L + G S + + ++ + +Q HG++ G
Sbjct: 14 GFPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLM 73
Query: 176 GNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKM 235
G++ + + LV YG DAR +FD I + W V++R Y + E V ++ +
Sbjct: 74 GDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLL 133
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++ R + F+ AL AC+ L G +IH ++K+ D+VVL L +MY KCG +
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEI 192
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
+ A + + RN++ WTS+++GY + E LFN M E NV+
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG------------ 240
Query: 356 LWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSN 415
++ T G ++ C LS + GK HG + ++ + +
Sbjct: 241 -------------------NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 416 ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW-ETR 474
+LLDMY KCG++ +AR F + S D V W A++ GY G EA++ F +M+ E +
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSH-VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 475 PSKFTFETLLAACANISSLEQGKQIHCFVIR-NCYEINVVCRGALVEVYTKCCCLEYAIR 533
P+ T ++L+ C I +LE G+ +H I+ ++ NV ALV +Y KC A
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKY 398
Query: 534 VFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGN 593
VF+ S D++ NS+I GF N EAL +F M E + P+ +T + AC G+
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 594 VKLA 597
+ +
Sbjct: 459 LAVG 462
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 283/534 (52%), Gaps = 37/534 (6%)
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAG 223
Q+H ++K G N+I + L+D Y KC A ++FD + +N VSW+ ++ +++ G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 224 NGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLG 283
+ K ++ +F +M R+ I P FTF+ L AC L++ +G+QIHG +KI FE V
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 284 SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVIS 343
SL +MY KCGR I EA ++F + +R++IS
Sbjct: 147 SLVDMYSKCGR-------------------------------INEAEKVFRRIVDRSLIS 175
Query: 344 WNAMLAGYTRSLLWKEALDFVFLMRKTT--KDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
WNAM+AG+ + +ALD +M++ + D+ TL +L C+ I GK++HGF
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 402 IHRNDYS--SNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQS 459
+ R+ + S+ ++ +L+D+Y KCG L SAR F Q+ ++ +SW++++ GYA+ G+
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWSSLILGYAQEGEF 294
Query: 460 EEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EAM F +Q ++ F +++ A+ + L QGKQ+ ++ + ++
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
V++Y KC ++ A + F E DVI +I G+ + G++++ +F M + I+PD
Sbjct: 355 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDE 414
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
+ + +L AC H G +K + F + +GI P++EHY C++ L R G +KE + ++
Sbjct: 415 VCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRFDR 692
MP P V + + + CR +G LG+ + L ++ P + + +N + +
Sbjct: 475 TMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 215/426 (50%), Gaps = 41/426 (9%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N I+ Y KC A +FD MPER+ SW+A++ + NG +L LF +M G+
Sbjct: 45 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 104
Query: 141 ANQITYANVLRSSA--EELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N+ T++ L++ LE G+ Q+HG +K GF V + +SLVD Y KC + +A
Sbjct: 105 PNEFTFSTNLKACGLLNALEKGL--QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 162
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDI--RPLNFTFANALFACSF 256
++F I +++ +SWN ++ ++ AG G +A+ F M +I RP FT + L ACS
Sbjct: 163 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 222
Query: 257 LSSPYEGMQIHGVIIKIDFE--GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWT 314
Y G QIHG +++ F + GSL ++YVKCG L AR DQ E+ +ISW+
Sbjct: 223 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 315 SIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDI 374
S++ GYA G EA LF + E N I
Sbjct: 283 SLILGYAQEGEFVEAMGLFKRLQELN-------------------------------SQI 311
Query: 375 DQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWF 434
D L I+ V A + ++ GK++ + V N+++DMY KCG + A F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 435 YQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSL 493
+M Q +D +SW V+TGY + G ++++ F EM + P + + +L+AC++ +
Sbjct: 372 AEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 494 EQGKQI 499
++G+++
Sbjct: 431 KEGEEL 436
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 40/316 (12%)
Query: 382 ILNVCA--GLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQ 439
IL VC GLS+ G +VH ++ ++ N+ SN L+DMY KC A F M +
Sbjct: 12 ILRVCTRKGLSD--QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 440 RRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
R+ VSW+A+++G+ G + +++ FSEM + P++FTF T L AC +++LE+G Q
Sbjct: 70 -RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 499 IHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNER 558
IH F ++ +E+ V +LV++Y+KC + A +VF+ +I N+MI GF H
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 559 GREALEVFGLMKKEGIK--PDHITFHGILLACIHEGNVKLALQFFDSM-RCKYGIIPQLE 615
G +AL+ FG+M++ IK PD T +L AC G + Q + R +
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 616 HYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKN----------GYATLG 665
++ LY + GY+ F+ RK FD+ ++ GYA G
Sbjct: 249 ITGSLVDLYVKCGYL-----------FSA-----RKAFDQIKEKTMISWSSLILGYAQEG 292
Query: 666 EWAA-----RRLNELN 676
E+ +RL ELN
Sbjct: 293 EFVEAMGLFKRLQELN 308
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
++L C +QG Q+HC+++++ +N++ L+++Y KC A +VF
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 542 DVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFF 601
+V+ ++++ G N + +L +F M ++GI P+ TF L AC ++ LQ
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ-I 129
Query: 602 DSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
K G +E ++ +Y + G + E E R+
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
+ +++++ V +LN ++ Y KCG +D+A F EM +D SW ++ Y
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHG-LIVKRGFCGNV 178
++G +++ +F +M + +++ Y VL + + + ++L L+ G V
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 179 ILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVAGN---GKEAVVMFFK 234
+ +VD G+ + +A+ + D + K N W ++ V G+ GKE +
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI--- 507
Query: 235 MLREDIR-PLNFTFANALFA 253
+LR D + P N+ + L+
Sbjct: 508 LLRIDAKNPANYVMMSNLYG 527
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 275 bits (704), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/600 (28%), Positives = 297/600 (49%), Gaps = 61/600 (10%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS 140
N AI Y + G ++A +F MP S+N M+ Y +NG +LF +M +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL- 126
Query: 141 ANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRM 200
+++ +++ LG +++L ++ +R C ++++ Y + + DAR +
Sbjct: 127 ---VSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGYAQNGCVDDARSV 179
Query: 201 FDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSP 260
FD + KN VSWN ++ Y+ +EA ++F + N + + +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 261 --YEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVS 318
++ M + V+ + ++ G Y + G++++AR L D+ +++ +WT++VS
Sbjct: 240 QFFDSMNVRDVV-----SWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 319 GYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVT 378
GY + + EARELF++MPERN +SWNAMLAGY +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG------------------------ 325
Query: 379 LGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS 438
++M KE+ + N+ N ++ Y +CG + A+ F +M
Sbjct: 326 -----------ERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 439 QRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGK 497
+RD VSW A++ GY++ G S EA+ F +M+ E R ++ +F + L+ CA++ +LE GK
Sbjct: 371 -KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK 429
Query: 498 QIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNE 557
Q+H +++ YE AL+ +Y KC +E A +FKE + D++ N+MI G+ +
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 558 RGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHY 617
G AL F MK+EG+KPD T +L AC H G V Q+F +M YG++P +HY
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHY 549
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
CM+ L R G +++ + + MPF P + + R +G L E AA ++ + P
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEP 609
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 215/434 (49%), Gaps = 53/434 (12%)
Query: 68 LVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRT 127
L P V N + Y + G +DDAR +FD MPE++ SWNA+L AY QN
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN------ 201
Query: 128 LELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDA 187
+++ A +L S E L L G VK+
Sbjct: 202 --------------SKMEEACMLFKSRENWALVSWNCLLGGFVKK--------------- 232
Query: 188 YGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTF 247
+ +AR+ FD + ++ VSWN I+ Y +G EA +F D P+ F
Sbjct: 233 ----KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF------DESPVQDVF 282
Query: 248 ANALFACSFLSSPY--EGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
++ + E ++ + E ++V ++ YV+ R+E A+ L D
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
RN+ +W ++++GYA G+I EA+ LF++MP+R+ +SW AM+AGY++S EAL
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
M + +++ + L+ CA + +++GK++HG + + Y + FV NALL MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLL 484
++ A F +M+ +D VSWN ++ GY+R G E A+ F M+ E +P T +L
Sbjct: 459 SIEEANDLFKEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 485 AACANISSLEQGKQ 498
+AC++ +++G+Q
Sbjct: 518 SACSHTGLVDKGRQ 531
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 6/285 (2%)
Query: 60 EARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYT 119
E ++ L P V N I Y +CG + +A+ LFD+MP+RD SW AM+ Y+
Sbjct: 326 ERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 385
Query: 120 QNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVI 179
Q+G L LF+ M G N+ ++++ L + A+ + L + KQLHG +VK G+
Sbjct: 386 QSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 445
Query: 180 LESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED 239
+ ++L+ Y KC + +A +F ++ K+ VSWN ++ Y G G+ A+ F M RE
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG 505
Query: 240 IRPLNFTFANALFACSFLSSPYEGMQ-IHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA 298
++P + T L ACS +G Q + + + + ++ + G LEDA
Sbjct: 506 LKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDA 565
Query: 299 RGLL-DQPDERNIISWTSIVSGYAISGRIR----EARELFNEMPE 338
L+ + P E + W +++ + G A ++F PE
Sbjct: 566 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPE 610
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/638 (28%), Positives = 312/638 (48%), Gaps = 35/638 (5%)
Query: 40 VSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGL 99
V ++ L +LC +A E K+ S ++ + V L N + + + GNL DA +
Sbjct: 92 VDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYV 151
Query: 100 FDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELE 158
F +M ER+ SWN ++G Y + G+ + L+ M GV + T+ VLR+ +
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 159 LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRR 218
L K++H +V+ G+ ++ + ++L+ Y KC + AR +FD + ++ +SWN ++
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 219 YLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
Y G E + +FF M + P T + + AC L G IH +I F D
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPE 338
V SLT+MY+ G +A L + + ++I+SWT+++SGY +N +P+
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE-----------YNFLPD 380
Query: 339 RNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEV 398
+ A+D +M + + D++T+ +L+ CA L ++ G E+
Sbjct: 381 K--------------------AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420
Query: 399 HGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ 458
H + S + V+N L++MY KC + A F+ + R++ +SW +++ G +
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLNNR 479
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
EA+ +M+ +P+ T LAACA I +L GK+IH V+R ++ AL
Sbjct: 480 CFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+++Y +C + A F S DV N ++ G+ +G +E+F M K ++PD
Sbjct: 540 LDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
ITF +L C V+ L +F M YG+ P L+HY C++ L R G ++E F+
Sbjct: 599 ITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 639 RMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELN 676
+MP P + + + CR + LGE +A+ + EL+
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELD 695
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 358 KEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNAL 417
+EA+ + M++ +D+ ++ +C + G +V+ + S + + NA
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 418 LDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQW--ETRP 475
L M+ + GNL A F +MS+ R+ SWN ++ GYA++G +EAM + M W +P
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 476 SKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVF 535
+TF +L C I L +GK++H V+R YE+++ AL+ +Y KC ++ A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
D+I N+MI G+ N E LE+F M+ + PD +T ++ AC G+ +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRM 640
L + + G + + ++Y G +E E +RM
Sbjct: 315 LG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/646 (28%), Positives = 313/646 (48%), Gaps = 47/646 (7%)
Query: 38 EPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDAR 97
+P SY+ Y+ + CAS + + + +++ ++ VF+ ++ Y KCG++ +A
Sbjct: 248 KPDSYT-YSSVLAACASLEKLRFGKVVQARVIK-CGAEDVFVCTAIVDLYAKCGHMAEAM 305
Query: 98 GLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
+F +P SW ML YT++ LE+F +M HSGV N T +V+ +
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 158 ELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMF---DDIQNKNAVSWNV 214
+ + Q+H + K GF + + ++L+ Y K + + ++F DDIQ +N V NV
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 215 IVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKID 274
++ + + +A+ +F +ML+E +R F+ + L S L G Q+HG +K
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 275 FEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFN 334
D V SL +Y KCG LE E+ +LF
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLE-------------------------------ESYKLFQ 509
Query: 335 EMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKM 394
+P ++ W +M++G+ +EA+ M D+ TL +L VC+ +
Sbjct: 510 GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPR 569
Query: 395 GKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYA 454
GKE+HG+ R + + +AL++MY KCG+L+ AR Y D VS +++++GY+
Sbjct: 570 GKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR-QVYDRLPELDPVSCSSLISGYS 628
Query: 455 RRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCFV--IRNCYEIN 511
+ G ++ F +M F ++L A A G Q+H ++ I C E +
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPS 688
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
V +L+ +Y+K ++ + F + + D+I ++I + + + EAL+V+ LMK+
Sbjct: 689 V--GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
+G KPD +TF G+L AC H G V+ + +SM YGI P+ HY CM+ R G ++
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
E E F+N M P + + C+ +G LG+ AA++ EL P
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 273/582 (46%), Gaps = 42/582 (7%)
Query: 64 LESNLVTFYPTP-PVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
L+++L+ Y P VFL + Y G++ DA LFD +P+ D S N M+ Y Q+
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+L F M+ G AN+I+Y +V+ + + S+ + +K G+ ++ES
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+L+D + K + DA ++F D + N WN I+ L N +F +M +P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
++T+++ L AC+ L G + +IK CG
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIK-------------------CG--------- 281
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
++ T+IV YA G + EA E+F+ +P +V+SW ML+GYT+S AL+
Sbjct: 282 ----AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYR 422
MR + +I+ T+ +++ C S + +VH ++ ++ + + V+ AL+ MY
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 423 KCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFE 481
K G++ + F + + + N ++T +++ + +A+ F+ M E R +F+
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 482 TLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSL 541
+LL+ + L GKQ+H + +++ +++ +L +Y+KC LE + ++F+
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 542 DVIICNSMILGFCHNERG--REALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQ 599
D SMI GF NE G REA+ +F M +G PD T +L C ++ +
Sbjct: 515 DNACWASMISGF--NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 600 FFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMP 641
+ GI ++ ++ +Y + G +K +R+P
Sbjct: 573 -IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 197/466 (42%), Gaps = 55/466 (11%)
Query: 4 NAATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARK 63
N ++ S+S + T+ + L++DE SL + L C + V
Sbjct: 419 NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD--CLNLGKQVHGYT 476
Query: 64 LESNLV-TFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNG 122
L+S LV +F L Y KCG+L+++ LF +P +D W +M+ + + G
Sbjct: 477 LKSGLVLDLTVGSSLFTL------YSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 123 FPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILES 182
+ + LF +M G S ++ T A VL + L K++HG ++ G + L S
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 183 SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRP 242
+LV+ Y KC + AR+++D + + VS + ++ Y G ++ ++F M+
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 243 LNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLL 302
+F ++ L A + G Q+H I KI + V SL MY K G ++D
Sbjct: 651 DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAF 710
Query: 303 DQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALD 362
Q + ++I+WT++++ YA G+ EA +++N M E+ G+
Sbjct: 711 SQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK----------GFKP--------- 751
Query: 363 FVFLMRKTTKDIDQVTLGLILNVCA--GLSEIKMGKEVHGFIHRNDYSSNIFVSN----- 415
D+VT +L+ C+ GL E + H N + +
Sbjct: 752 ------------DKVTFVGVLSACSHGGLVE-------ESYFHLNSMVKDYGIEPENRHY 792
Query: 416 -ALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
++D + G LR A + M + D + W +L G+ E
Sbjct: 793 VCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 274/541 (50%), Gaps = 37/541 (6%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVTFYPTPPV-FLLNRAIECYGKCGNLDDARGLFDEM 103
+A++ +LC +A+ + R+L S + +P+ + FL + + YGKCG+LDDA +FDEM
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSK 163
P+R +WN M+GAY NG P L L+ +M GV ++ +L++ A+ ++
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 164 QLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK-NAVSWNVIVRRYLVA 222
+LH L+VK G+ + ++LV Y K ++ ARR+FD Q K +AV WN I+ Y +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV-V 281
G E + +F +M P ++T +AL AC S G +IH ++K ++ V
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNV 341
+L MY +CG++ A +L Q + ++++W S++ GY
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY--------------------- 361
Query: 342 ISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++L++KEAL+F M D+V++ I+ LS + G E+H +
Sbjct: 362 ----------VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 411
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ ++ + SN+ V N L+DMY KC NL + +D +SW V+ GYA+ E
Sbjct: 412 VIKHGWDSNLQVGNTLIDMYSKC-NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVE 470
Query: 462 AMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F ++ + + ++L A + + S+ K+IHC ++R ++ V + LV+
Sbjct: 471 ALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVD 529
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
VY KC + YA RVF+ DV+ SMI N EA+E+F M + G+ D +
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 581 F 581
Sbjct: 590 L 590
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 316/656 (48%), Gaps = 38/656 (5%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P+ S + L + CA + I +L S LV F++N + Y K +L AR
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 99 LFDEMPER-DGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEEL 157
LFD E+ D WN++L +Y+ +G TLELF +M+ +G + N T + L +
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 158 ELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIV 216
+ K++H ++K + + ++L+ Y +C M A R+ + N + V+WN ++
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 217 RRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFE 276
+ Y+ KEA+ F M+ + + + + A LS+ GM++H +IK ++
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
+ V +L +MY KC N+ + GR F M
Sbjct: 419 SNLQVGNTLIDMYSKC----------------NLTCYM---------GRA------FLRM 447
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
++++ISW ++AGY ++ EAL+ + K +ID++ LG IL + L + + K
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVK 507
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
E+H I R + + N L+D+Y KC N+ A F + + +D VSW ++++ A
Sbjct: 508 EIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALN 565
Query: 457 GQSEEAMTSFSEMQWETRPSKFTFETL--LAACANISSLEQGKQIHCFVIRNCYEINVVC 514
G EA+ F M ET S + L L+A A++S+L +G++IHC+++R + +
Sbjct: 566 GNESEAVELFRRMV-ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
A+V++Y C L+ A VF ++ SMI + + G+ A+E+F M+ E +
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 575 KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELE 634
PDHI+F +L AC H G + F M +Y + P EHY C++ + R + E
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAF 744
Query: 635 DFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTNRF 690
+FV M PT + + CR + +GE AA+RL EL P P + +N F
Sbjct: 745 EFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 800
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 227/493 (46%), Gaps = 34/493 (6%)
Query: 6 ATILKNILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLE 65
A + +ILS S +TL H+ P SY++ + L S A +
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 66 SNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPG 125
S L + + +++ N I Y +CG + A + +M D +WN+++ Y QN
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 368
Query: 126 RTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLV 185
LE F DM +G +++++ +++ +S L +LH ++K G+ N+ + ++L+
Sbjct: 369 EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLI 428
Query: 186 DAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNF 245
D Y KC + R F + +K+ +SW ++ Y EA+ +F + ++ +
Sbjct: 429 DMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEM 488
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQP 305
+ L A S L S +IH I++ D V+ L ++Y KC + A + +
Sbjct: 489 ILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESI 547
Query: 306 DERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVF 365
++++SWTS++S A++G EA ELF M E
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVE--------------------------- 580
Query: 366 LMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCG 425
T D V L IL+ A LS + G+E+H ++ R + ++ A++DMY CG
Sbjct: 581 ----TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636
Query: 426 NLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLL 484
+L+SA+ F ++ +R+ + + +++ Y G + A+ F +M+ E P +F LL
Sbjct: 637 DLQSAKAVFDRI-ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 485 AACANISSLEQGK 497
AC++ L++G+
Sbjct: 696 YACSHAGLLDEGR 708
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 183/391 (46%), Gaps = 49/391 (12%)
Query: 246 TFANALFACSFLSSPYEGMQIHGVIIKI--DFEGDDVVLGSLTEMYVKCGRLEDARGLLD 303
FA L C + +G Q+H I K FE D + G L MY KCG L+DA
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAE---- 136
Query: 304 QPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDF 363
++F+EMP+R +WN M+ Y + AL
Sbjct: 137 ---------------------------KVFDEMPDRTAFAWNTMIGAYVSNGEPASALAL 169
Query: 364 VFLMRKTTKDIDQVTLGL-----ILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALL 418
+ MR ++ V LGL +L CA L +I+ G E+H + + Y S F+ NAL+
Sbjct: 170 YWNMR-----VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALV 224
Query: 419 DMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSK 477
MY K +L +AR F ++ D V WN++L+ Y+ G+S E + F EM P+
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS 284
Query: 478 FTFETLLAACANISSLEQGKQIHCFVIRNCYEIN--VVCRGALVEVYTKCCCLEYAIRVF 535
+T + L AC S + GK+IH V+++ + VC AL+ +YT+C + A R+
Sbjct: 285 YTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVC-NALIAMYTRCGKMPQAERIL 343
Query: 536 KESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVK 595
++ ++ DV+ NS+I G+ N +EALE F M G K D ++ I+ A N+
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL- 402
Query: 596 LALQFFDSMRCKYGIIPQLEHYECMIKLYCR 626
LA + K+G L+ +I +Y +
Sbjct: 403 LAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 4/262 (1%)
Query: 382 ILNVCAGLSEIKMGKEVHGFIHRNDYSSNI-FVSNALLDMYRKCGNLRSARIWFYQMSQR 440
+L +C + G+++H I + S + F++ L+ MY KCG+L A F +M
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPD- 144
Query: 441 RDKVSWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKF-TFETLLAACANISSLEQGKQI 499
R +WN ++ Y G+ A+ + M+ E P +F LL ACA + + G ++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 500 HCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNER 558
H +++ Y ALV +Y K L A R+F D ++ NS++ + + +
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 559 GREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYE 618
E LE+F M G P+ T L AC KL + S+ +L
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 619 CMIKLYCRYGYMKELEDFVNRM 640
+I +Y R G M + E + +M
Sbjct: 325 ALIAMYTRCGKMPQAERILRQM 346
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRN--CYEINVVCRGALVEVYTKCCCLEYAIRVFK 536
F +L C ++ QG+Q+H + + +E++ + G LV +Y KC L+ A +VF
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLA-GKLVFMYGKCGSLDDAEKVFD 140
Query: 537 ESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKL 596
E N+MI + N AL ++ M+ EG+ +F +L AC +++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 597 ALQFFDSMRCKYGIIPQLEHYECMIKL-YCRYGYMKELEDFVNRMPFNPTVPMLRKIFDK 655
+ + ++KL Y G++ + V+ N + R++FD
Sbjct: 201 GSEL----------------HSLLVKLGYHSTGFI--VNALVSMYAKNDDLSAARRLFDG 242
Query: 656 CRKNGYATL 664
++ G A L
Sbjct: 243 FQEKGDAVL 251
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 285/597 (47%), Gaps = 67/597 (11%)
Query: 148 NVLRSSAEELELGVSKQL-HGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
N+L+ S + + QL H ++K G +V L ++L++ Y K AR++FD++
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 207 KNAVSWNVIVRRY---------------------------LVA----GNGKEAVVMFFKM 235
+ A SWN ++ Y +V G +A+ + M
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 236 LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRL 295
++E I P FT N L + + G ++H I+K+ G+ V SL MY KCG
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 296 EDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSL 355
A+ + D+ R+I SW ++++ + G++ A F +M ER++++WN+M++G+ +
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 356 LWKEALD-FVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVS 414
ALD F ++R + D+ TL +L+ CA L ++ +GK++H I + + V
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 415 NALLDMYRKCGNLRSARIWFYQMSQR--------------------------------RD 442
NAL+ MY +CG + +AR Q + RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHC 501
V+W A++ GY + G EA+ F M RP+ +T +L+ ++++SL GKQIH
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 502 FVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKE-SSSLDVIICNSMILGFCHNERGR 560
+++ +V AL+ +Y K + A R F D + SMI+ +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECM 620
EALE+F M EG++PDHIT+ G+ AC H G V Q+FD M+ IIP L HY CM
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 621 IKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
+ L+ R G ++E ++F+ +MP P V + CR + LG+ AA RL L P
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP 614
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/523 (30%), Positives = 254/523 (48%), Gaps = 39/523 (7%)
Query: 11 NILSKSSPKPTPSKTLTKTISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVT 70
N+L KS K T +KS S L +L + + + + ARKL +
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEM-- 75
Query: 71 FYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLEL 130
P F N + Y K G++D FD++P+RD SW M+ Y G + + +
Sbjct: 76 --PLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 131 FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
DM G+ Q T NVL S A + K++H IVK G GNV + +SL++ Y K
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 191 C------------MVMTD-------------------ARRMFDDIQNKNAVSWNVIVRRY 219
C MV+ D A F+ + ++ V+WN ++ +
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 220 LVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGD 278
G A+ +F KMLR+ + P FT A+ L AC+ L G QIH I+ F+
Sbjct: 254 NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDIS 313
Query: 279 DVVLGSLTEMYVKCGRLEDARGLLDQPDERN--IISWTSIVSGYAISGRIREARELFNEM 336
+VL +L MY +CG +E AR L++Q ++ I +T+++ GY G + +A+ +F +
Sbjct: 314 GIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
+R+V++W AM+ GY + + EA++ M + + TL +L+V + L+ + GK
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
++HG ++ ++ VSNAL+ MY K GN+ SA F + RD VSW +++ A+
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQ 498
G +EEA+ F M E RP T+ + +AC + + QG+Q
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 274/537 (51%), Gaps = 31/537 (5%)
Query: 165 LHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQ--NKNAVSWNVIVRRYLVA 222
LHG I+KR +SL + F D + N N V+V R A
Sbjct: 12 LHGFILKRNLSS---FHASL--------------KRFSDKKFFNPNHEDGGVVVERLCRA 54
Query: 223 GNGKEAVVMFF--KMLREDI-------RPLNFTFANALFACSFLSSPYEGMQIHGVIIKI 273
EA+ + K+LRE + +P T+ N + CS + EG ++H I
Sbjct: 55 NRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS 114
Query: 274 DFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELF 333
F V+ L MY KCG L DAR + D+ R++ SW +V+GYA G + EAR+LF
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV-TLGLILNVCAGLSEI 392
+EM E++ SW AM+ GY + +EAL LM++ + T+ + + A + I
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ GKE+HG I R S+ + ++L+DMY KCG + AR F ++ ++ D VSW +++
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-DVVSWTSMIDR 293
Query: 453 YARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEIN 511
Y + + E + FSE+ RP+++TF +L ACA++++ E GKQ+H ++ R ++
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKK 571
+LV++YTKC +E A V D++ S+I G N + EAL+ F L+ K
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLK 413
Query: 572 EGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMK 631
G KPDH+TF +L AC H G V+ L+FF S+ K+ + +HY C++ L R G +
Sbjct: 414 SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 632 ELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
+L+ ++ MP P+ + + C G L E AA+ L ++ P P + N
Sbjct: 474 QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMAN 530
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 228/493 (46%), Gaps = 73/493 (14%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S Y +L Q+C+ ++A+ E +K+ ++ T P + + NR + Y KCG+L DAR +FDE
Sbjct: 86 STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-----------VSANQITYANVLR 151
MP RD SWN M+ Y + G +LF +M V +Q A VL
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 152 SSAEELE---------------------LGVSKQLHGLIVKRGFCGNVILESSLVDAYGK 190
S + + + K++HG IV+ G + +L SSL+D YGK
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 191 CMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANA 250
C + +AR +FD I K+ VSW ++ RY + +E +F +++ RP +TFA
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 251 LFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNI 310
L AC+ L++ G Q+HG + ++ F+ SL +MY KCG +E A+ ++D + ++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 311 ISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKT 370
+SWTS++ G A +G+ P+ EAL + L+ K+
Sbjct: 386 VSWTSLIGGCAQNGQ-----------PD--------------------EALKYFDLLLKS 414
Query: 371 TKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDMYRKCGNL 427
D VT +L+ C ++ G E I HR ++S+ + L+D+ + G
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT--CLVDLLARSGRF 472
Query: 428 RSARIWFYQMSQRRDKVSWNAVLTGYARRGQ---SEEAMTSFSEMQWETRPSKFTFETLL 484
+ +M + K W +VL G + G +EEA +++ E + T +
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIY 532
Query: 485 AACANISSLEQGK 497
AA E+GK
Sbjct: 533 AAAGKWE--EEGK 543
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/609 (28%), Positives = 303/609 (49%), Gaps = 49/609 (8%)
Query: 75 PPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS-WNAMLGAYTQNGFPGRTLELFLD 133
P V+ + K G+++ A +FD+MPERD + WNAM+ ++G+ ++ELF +
Sbjct: 121 PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFRE 180
Query: 134 MNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMV 193
M+ GV ++ +A +L S + L KQ+H L++K GF + ++L+ Y C V
Sbjct: 181 MHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV 239
Query: 194 MTDARRMFD--DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANAL 251
+ DA +F+ D+ ++ V++NV++ L E++++F KML +RP + TF + +
Sbjct: 240 VVDACLVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVM 298
Query: 252 FACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNII 311
+CS G Q+HG+ IK +E +V + MY ED
Sbjct: 299 GSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMY---SSFED-------------- 338
Query: 312 SWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTT 371
A ++F + E+++++WN M++ Y ++ L K A+ M
Sbjct: 339 --------------FGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 372 KDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSAR 431
D+ T G +L L ++M V I + SS I +SNAL+ Y K G + A
Sbjct: 385 VKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKAD 441
Query: 432 IWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFS---EMQWETRPSKFTFETLLAACA 488
+ F + S R++ +SWNA+++G+ G E + FS E + P +T TLL+ C
Sbjct: 442 LLF-ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 489 NISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNS 548
+ SSL G Q H +V+R+ + AL+ +Y++C ++ ++ VF + S DV+ NS
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNS 560
Query: 549 MILGFCHNERGREALEVFGLMKKEG-IKPDHITFHGILLACIHEGNVKLALQFFDSMRCK 607
+I + + G A+ + M+ EG + PD TF +L AC H G V+ L+ F+SM
Sbjct: 561 LISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEF 620
Query: 608 YGIIPQLEHYECMIKLYCRYGYMKELEDFV--NRMPFNPTVPMLRKIFDKCRKNGYATLG 665
+G+I ++H+ C++ L R G++ E E V + V + +F C +G LG
Sbjct: 621 HGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLG 680
Query: 666 EWAARRLNE 674
+ A+ L E
Sbjct: 681 KMVAKLLME 689
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 199/421 (47%), Gaps = 11/421 (2%)
Query: 222 AGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDV 280
+G + A+ +F + R +RP ++ + A+ L G Q+H I+
Sbjct: 34 SGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSH 93
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERN 340
V +L +Y + G L + D+ DE ++ SWT+++S G I A E+F++MPER+
Sbjct: 94 VSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERD 153
Query: 341 VIS-WNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVH 399
++ WNAM+ G S + +++ M K D+ IL++C + GK+VH
Sbjct: 154 DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVH 212
Query: 400 GFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMS-QRRDKVSWNAVLTGYARRGQ 458
+ + + V NAL+ MY C + A + F + RD+V++N V+ G A +
Sbjct: 213 SLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR 272
Query: 459 SEEAMTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGAL 518
E + ++ RP+ TF +++ +C S G Q+H I+ YE + A
Sbjct: 273 DESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNAT 329
Query: 519 VEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDH 578
+ +Y+ A +VF+ D++ N+MI + + G+ A+ V+ M G+KPD
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 579 ITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVN 638
TF G LLA + +V L+ + K+G+ ++E +I Y + G +++ +
Sbjct: 390 FTF-GSLLATSLDLDV---LEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE 445
Query: 639 R 639
R
Sbjct: 446 R 446
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 126/574 (21%), Positives = 236/574 (41%), Gaps = 79/574 (13%)
Query: 112 NAMLGAYTQNGFPGRTLELFLDMNH-SGVSANQITYANVLRSSAEELELGVSKQLHGLIV 170
N L T++G L+LF D++ + + +Q + + + ++ + Q+H +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 171 KRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVV 230
+ G + + ++L+ Y + + ++ FD+I + SW ++ G+ + A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 231 MFFKMLRED--------------------------------IRPLNFTFANALFACSFLS 258
+F KM D +R F FA L C + S
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 259 SPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPD--ERNIISWTSI 316
+ G Q+H ++IK F V+ +L MY C + DA + ++ D R+ +++ +
Sbjct: 205 LDF-GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
+ G A R E+ +F +M E + L L FV +M +
Sbjct: 264 IDGLAGFKR-DESLLVFRKMLEAS---------------LRPTDLTFVSVMGSCS----- 302
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
CA MG +VHG + Y VSNA + MY + +A F
Sbjct: 303 ---------CAA-----MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQ 495
+ + +D V+WN +++ Y + + AM+ + M +P +FTF +LLA ++ LE
Sbjct: 349 L-EEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE- 406
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
+ +I+ + AL+ Y+K +E A +F+ S ++I N++I GF H
Sbjct: 407 --MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYH 464
Query: 556 NERGREALEVFGLMKKEGIK--PDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQ 613
N E LE F + + ++ PD T +L C+ ++ L Q + ++G +
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ-THAYVLRHGQFKE 523
Query: 614 LEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVP 647
+I +Y + G ++ + N+M V
Sbjct: 524 TLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVS 557
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 24/327 (7%)
Query: 51 LCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGS 110
L A+S + +++ ++ F + + + N I Y K G ++ A LF+ ++ S
Sbjct: 395 LLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLIS 454
Query: 111 WNAMLGAYTQNGFPGRTLELFLDMNHSGVS--ANQITYANVLRSSAEELELGVSKQLHGL 168
WNA++ + NGFP LE F + S V + T + +L L + Q H
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+++ G ++ ++L++ Y +C + ++ +F+ + K+ VSWN ++ Y G G+ A
Sbjct: 515 VLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENA 574
Query: 229 VVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI-------HGVIIKIDFEGDDV 280
V + M E + P TF+ L ACS EG++I HGVI +D
Sbjct: 575 VNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH----- 629
Query: 281 VLGSLTEMYVKCGRLEDARGLLDQPDERNIIS----WTSIVSGYAISGRIREAR---ELF 333
L ++ + G L++A L+ + E+ I S W ++ S A G ++ + +L
Sbjct: 630 -FSCLVDLLGRAGHLDEAESLV-KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLL 687
Query: 334 NEMPERNVISWNAMLAGYTRSLLWKEA 360
E + + + + Y + +WKEA
Sbjct: 688 MEKEKDDPSVYVQLSNIYAGAGMWKEA 714
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 265 bits (677), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 292/573 (50%), Gaps = 37/573 (6%)
Query: 87 YGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITY 146
YG+ GNL DA +FD MP RD +W+ ++ + +NG + L +F M GV + +T
Sbjct: 146 YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTM 205
Query: 147 ANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQN 206
+V+ AE L +++ +HG I ++ F + L +SL+ Y KC + + R+F+ I
Sbjct: 206 ISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK 265
Query: 207 KNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQI 266
KNAVSW ++ Y ++A+ F +M++ I P T + L +C + EG +
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV 325
Query: 267 HGVIIKIDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGR 325
HG ++ + + + L +L E+Y +CG+L D +L +VS
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL------------RVVS------- 366
Query: 326 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 385
+RN+++WN++++ Y + +AL M D TL ++
Sbjct: 367 ------------DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 386 CAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVS 445
C + +GK++HG + R D S FV N+L+DMY K G++ SA F Q+ + R V+
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQI-KHRSVVT 472
Query: 446 WNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVI 504
WN++L G+++ G S EA++ F M ++ TF ++ AC++I SLE+GK +H +I
Sbjct: 473 WNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI 532
Query: 505 RNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALE 564
+ + ++ AL+++Y KC L A VF+ SS ++ +SMI + + R A+
Sbjct: 533 ISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAIS 591
Query: 565 VFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLY 624
F M + G KP+ + F +L AC H G+V+ +F+ M+ +G+ P EH+ C I L
Sbjct: 592 TFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLL 650
Query: 625 CRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCR 657
R G +KE + MPF + + + CR
Sbjct: 651 SRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 272/560 (48%), Gaps = 50/560 (8%)
Query: 45 YAHLFQLCASSKAI--VEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
Y LF+ C+S + + + A L + + P P + + IE Y G+ D +R +F+
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLP----VTKLIESYAFMGSPDSSRLVFEA 59
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVS-ANQIT---YANVLRSSAEELE 158
P D + M G + L+ +D+ H VS QI+ + +VLR+ A E
Sbjct: 60 FPYPD----SFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSRE 115
Query: 159 -LGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L V ++HG I+K G + ++E+SL+ YG+ ++DA ++FD + ++ V+W+ +V
Sbjct: 116 HLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVS 175
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEG 277
L G +A+ MF M+ + + P T + + C+ L +HG I + F+
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 278 DDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMP 337
D+ + SL MY KCG L + + ++ ++N +SWT
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT----------------------- 272
Query: 338 ERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKE 397
AM++ Y R ++AL M K+ + + VTL +L+ C + I+ GK
Sbjct: 273 --------AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 398 VHGFIHRNDYSSNI-FVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
VHGF R + N +S AL+++Y +CG L +S R+ V+WN++++ YA R
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD-RNIVAWNSLISLYAHR 383
Query: 457 GQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
G +A+ F +M + +P FT + ++AC N + GKQIH VIR V +
Sbjct: 384 GMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV-Q 442
Query: 516 GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIK 575
+L+++Y+K ++ A VF + V+ NSM+ GF N EA+ +F M ++
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 576 PDHITFHGILLACIHEGNVK 595
+ +TF ++ AC G+++
Sbjct: 503 MNEVTFLAVIQACSSIGSLE 522
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 218/423 (51%), Gaps = 40/423 (9%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L N + Y KCG+L + +F+++ +++ SW AM+ +Y + F + L F +M SG
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNV-ILESSLVDAYGKCMVMTDA 197
+ N +T +VL S + K +HG V+R N L +LV+ Y +C ++D
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+ + ++N V+WN ++ Y G +A+ +F +M+ + I+P FT A+++ AC
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
G QIHG +I+ D D+ V SL +MY K G ++ A + +Q R++++W S++
Sbjct: 419 GLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSML 477
Query: 318 SGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQV 377
G++ +G EA LF+ M +++ L ++++V
Sbjct: 478 CGFSQNGNSVEAISLFDYM-------YHSYL------------------------EMNEV 506
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRNDYSS--NIFVSNALLDMYRKCGNLRSARIWFY 435
T ++ C+ + ++ GK VH H+ S ++F AL+DMY KCG+L +A F
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVH---HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 436 QMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLE 494
MS R ++++ Y G+ A+++F++M + T+P++ F +L+AC + S+E
Sbjct: 564 AMSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 495 QGK 497
+GK
Sbjct: 623 EGK 625
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 211/446 (47%), Gaps = 36/446 (8%)
Query: 159 LGVSKQLHG-LIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVR 217
L + QLH L+V + + + L+++Y +R +F+ ++ + V+++
Sbjct: 14 LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIK 73
Query: 218 RYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE-GMQIHGVIIKIDFE 276
+ A+ ++ +++ E + F F + L AC+ G ++HG IIK +
Sbjct: 74 CNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD 133
Query: 277 GDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM 336
D V+ SL MY + G L D A ++F+ M
Sbjct: 134 DDAVIETSLLCMYGQTGNLSD-------------------------------AEKVFDGM 162
Query: 337 PERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGK 396
P R++++W+ +++ + +AL M + D VT+ ++ CA L +++ +
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 397 EVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARR 456
VHG I R + + + N+LL MY KCG+L S+ F +++ +++ VSW A+++ Y R
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA-KKNAVSWTAMISSYNRG 281
Query: 457 GQSEEAMTSFSEM-QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCR 515
SE+A+ SFSEM + P+ T ++L++C I + +GK +H F +R + N
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 516 G-ALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
ALVE+Y +C L V + S +++ NS+I + H +AL +F M + I
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 575 KPDHITFHGILLACIHEGNVKLALQF 600
KPD T + AC + G V L Q
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQI 427
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 78 FLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHS 137
F+ N I+ Y K G++D A +F+++ R +WN+ML ++QNG + LF M HS
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 138 GVSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDA 197
+ N++T+ V+++ + L K +H ++ G ++ +++L+D Y KC + A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAA 558
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFL 257
+F + +++ VSW+ ++ Y + G A+ F +M+ +P F N L AC
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDA-RGLLDQPDERNIISWTSI 316
S EG ++ + ++ + G L++A R + + P + W S+
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Query: 317 VSGYAISGRIREARELFNEMPE 338
V+G I ++ + + N++ +
Sbjct: 679 VNGCRIHQKMDIIKAIKNDLSD 700
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/635 (28%), Positives = 314/635 (49%), Gaps = 48/635 (7%)
Query: 48 LFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERD 107
LF+ C + ++ A+ L + LV V + + + Y GN+ AR FD + RD
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 108 GGSWNAMLGAYTQNGFPGRTLELF-LDMNHSGVSANQITYANVLRSSAEELELGVSKQLH 166
+WN M+ Y + G + F L M SG++ + T+ +VL++ ++ ++H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 167 GLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGK 226
L +K GF +V + +SL+ Y + + +AR +FD++ ++ SWN ++ Y +GN K
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 227 EAVVMFFKMLREDIRPLN-FTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSL 285
EA+ L +R ++ T + L AC+ G+ IH IK E + V L
Sbjct: 234 EALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 286 TEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWN 345
++Y + GRL R+ +++F+ M R++ISWN
Sbjct: 289 IDLYAEFGRL-------------------------------RDCQKVFDRMYVRDLISWN 317
Query: 346 AMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRN 405
+++ Y + A+ MR + D +TL + ++ + L +I+ + V GF R
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 406 D-YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEA-- 462
+ +I + NA++ MY K G + SAR F + D +SWN +++GYA+ G + EA
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIE 436
Query: 463 MTSFSEMQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVY 522
M + E + E ++ T+ ++L AC+ +L QG ++H +++N ++V +L ++Y
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 523 TKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFH 582
KC LE A+ +F + ++ + N++I + G +A+ +F M EG+KPDHITF
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 583 GILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPF 642
+L AC H G V F+ M+ YGI P L+HY CM+ +Y R G ++ F+ M
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 643 NPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P + + CR +G LG+ A+ L E+ P
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 145/558 (25%), Positives = 256/558 (45%), Gaps = 48/558 (8%)
Query: 34 LKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNL 93
L S Y + + + C + +++ K+ + F V++ I Y + +
Sbjct: 145 LSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 94 DDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSA-NQITYANVLRS 152
+AR LFDEMP RD GSWNAM+ Y Q+G L L +G+ A + +T ++L +
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSA 256
Query: 153 SAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSW 212
E + +H +K G + + + L+D Y + + D +++FD + ++ +SW
Sbjct: 257 CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 213 NVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
N I++ Y + A+ +F +M I+P T + S L + G ++
Sbjct: 317 NSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 376
Query: 273 IDFEGDDVVLG-SLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
+ +D+ +G ++ MY K G ++ AR + + ++ISW +I+SGYA +G EA E
Sbjct: 377 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
++N M E I+ N Q T +L C+
Sbjct: 437 MYNIMEEEGEIAAN------------------------------QGTWVSVLPACSQAGA 466
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
++ G ++HG + +N ++FV +L DMY KCG L A FYQ+ R + V WN ++
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCF-VIRNCYE 509
+ G E+A+ F EM E +P TF TLL+AC++ +++G+ CF +++ Y
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW--CFEMMQTDYG 583
Query: 510 INVVCR--GALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFG 567
I + G +V++Y + LE A++ K S +L C G L
Sbjct: 584 ITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC-RVHGNVDLGKIA 642
Query: 568 LMKKEGIKPDHITFHGIL 585
++P+H+ +H +L
Sbjct: 643 SEHLFEVEPEHVGYHVLL 660
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 208/461 (45%), Gaps = 40/461 (8%)
Query: 29 TISGHLKSDEPVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYG 88
T+S L++ + V+ L C + + S + +F+ N+ I+ Y
Sbjct: 237 TLSNGLRAMDSVTV---VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 89 KCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYAN 148
+ G L D + +FD M RD SWN+++ AY N P R + LF +M S + + +T +
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 149 VLRSSAEELELGVSKQLHGLIVKRG-FCGNVILESSLVDAYGKCMVMTDARRMFDDIQNK 207
+ ++ ++ + + G +++G F ++ + +++V Y K ++ AR +F+ + N
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 208 NAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFLSSPYEGMQI 266
+ +SWN I+ Y G EA+ M+ M E +I T+ + L ACS + +GM++
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 267 HGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRI 326
HG ++K D V+ SL +MY KCGRLEDA L Q N + W ++++ + G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 327 REARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVC 386
+A LF EM + V D +T +L+ C
Sbjct: 534 EKAVMLFKEMLDEGV-------------------------------KPDHITFVTLLSAC 562
Query: 387 AGLSEIKMGKEVHGFIHRNDY--SSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKV 444
+ + G+ + + DY + ++ ++DMY + G L +A + MS + D
Sbjct: 563 SHSGLVDEGQWCFEMM-QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 445 SWNAVLTGYARRGQSEEAMTSFSEMQWETRPSKFTFETLLA 485
W A+L+ G + + SE +E P + LL+
Sbjct: 622 IWGALLSACRVHGNVDLGKIA-SEHLFEVEPEHVGYHVLLS 661
>sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800
OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1
Length = 896
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 305/617 (49%), Gaps = 9/617 (1%)
Query: 81 NRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG-V 139
N I Y K G +A +F + S+ A++ +++ L++F M +G V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 140 SANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMT--DA 197
N+ T+ +L + + Q+HGLIVK GF +V + +SL+ Y K + D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 198 RRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLR-EDIRPLNFTFANALFACSF 256
++FD+I ++ SWN +V + G +A +F++M R E +FT + L +C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 257 LSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSI 316
S G ++HG I+I + V +L Y K ++ L + ++ +++T +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 317 VSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQ 376
++ Y G + A E+F + E+N I++NA++AG+ R+ +AL M + ++
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 377 VTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
+L ++ C +SE K+ +++HGF + + N + ALLDM +C + A F Q
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 437 MSQRRDKV-SWNAVLTGYARRGQSEEAMTSFSEMQWETR--PSKFTFETLLAACANISSL 493
D + +++ GYAR G ++A++ F E + + + +LA C +
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 494 EQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGF 553
E G QIHC+ ++ Y ++ +L+ +Y KCC + AI++F DVI NS+I +
Sbjct: 538 EMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCY 597
Query: 554 CHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLA--LQFFDSMRCKYGII 611
G EAL ++ M ++ IKPD IT ++ A + + KL+ F SM+ Y I
Sbjct: 598 ILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIE 657
Query: 612 PQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
P EHY +++ +G ++E ED +N MP P V +LR + D CR + ++ + A+
Sbjct: 658 PTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKL 717
Query: 672 LNELNPWAPFQFKITTN 688
+ P P ++ + +N
Sbjct: 718 ILSTKPETPSEYILKSN 734
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 77 VFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNH 136
+ L N I Y KC + DDA +F+ M E D SWN+++ Y L L+ MN
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 137 SGVSANQITYANVLRS 152
+ + IT V+ +
Sbjct: 616 KEIKPDIITLTLVISA 631
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 181/638 (28%), Positives = 309/638 (48%), Gaps = 40/638 (6%)
Query: 47 HLFQLCASSKAIVEARKLESNLVTF---YPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
L + C S + AR++ + ++T T + N I Y +CG+L+ AR +FD+M
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKM 158
Query: 104 PERDGGSWNAMLGAYTQN-GFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
P R+ S+NA+ AY++N F L M V N T+ ++++ A ++ +
Sbjct: 159 PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG 218
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
L+ I+K G+ NV++++S++ Y C + ARR+FD + N++AV+WN ++ L
Sbjct: 219 SSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 223 GNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVL 282
++ ++ F ML + P FT++ L CS L S G IH II D D +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 283 GSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVI 342
+L +MY CG + REA +F + N++
Sbjct: 339 NALLDMYCSCGDM-------------------------------REAFYVFGRIHNPNLV 367
Query: 343 SWNAMLAGYTRSLLWKEA-LDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
SWN++++G + + ++A L + L+R +T D+ T ++ A GK +HG
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEE 461
+ + Y ++FV LL MY K SA+ F M +R D V W ++ G++R G SE
Sbjct: 428 VTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER-DVVLWTEMIVGHSRLGNSEL 486
Query: 462 AMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVE 520
A+ F EM E R F+ +++ AC++++ L QG+ HC IR ++ + GALV+
Sbjct: 487 AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVD 546
Query: 521 VYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHIT 580
+Y K E A +F +S+ D+ NSM+ + + +AL F + + G PD +T
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 581 FHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKE-LEDFVNR 639
+ +L AC H G+ ++ M+ + GI +HY CM+ L + G + E LE
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Query: 640 MPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNP 677
P N + R + C +G +AA ++ +L+P
Sbjct: 666 PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDP 703
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 216/458 (47%), Gaps = 36/458 (7%)
Query: 43 SLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
S + L Q+CA + ++ L S ++ + V + + Y CG+L+ AR +FD
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS 162
+ RD +WN M+ +N L F +M SGV Q TY+ VL ++ +
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 163 KQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVA 222
K +H I+ ++ L+++L+D Y C M +A +F I N N VSWN I+
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 223 GNGKEAVVMFFKMLREDI-RPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVV 281
G G++A++M+ ++LR RP +TF+ A+ A + G +HG + K+ +E V
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 282 LGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM-PERN 340
+L MY K E A+ + D ER+++ WT ++ G++ G A + F EM E+N
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 341 VISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHG 400
RS D +L ++ C+ ++ ++ G+ H
Sbjct: 500 ------------RS--------------------DGFSLSSVIGACSDMAMLRQGEVFHC 527
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSE 460
R + + V AL+DMY K G +A F ++ D WN++L Y++ G E
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQHGMVE 586
Query: 461 EAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGK 497
+A++ F + ++ P T+ +LLAAC++ S QGK
Sbjct: 587 KALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 154/671 (22%), Positives = 282/671 (42%), Gaps = 95/671 (14%)
Query: 64 LESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAY----T 119
+E++ YP + N I Y +C +L+ AR +FD+MP+R+ + + +
Sbjct: 13 VETDAAAEYP----YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSM 68
Query: 120 QNGFPGRTLEL-------FLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGLIVKR 172
+ + ++L F+ +N S ++T R L ++Q+H L++
Sbjct: 69 GSSLHSQIIKLGSFQMIFFMPLNEIASSVVELT-----RKCVSITVLKRARQIHALVLTA 123
Query: 173 GFCGNVILES-----SLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGN-GK 226
G ES +L+ Y +C + AR++FD + ++N VS+N + Y +
Sbjct: 124 G--AGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFAS 181
Query: 227 EAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLT 286
A + M E ++P + TF + + C+ L G ++ IIK+ + + VV S+
Sbjct: 182 YAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVL 241
Query: 287 EMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNA 346
MY CG LE AR + D + R+ ++W +++ G + +I + F M
Sbjct: 242 GMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNM---------- 291
Query: 347 MLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRND 406
+++G D Q T ++LN C+ L +GK +H I +D
Sbjct: 292 LMSGV---------------------DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 407 YSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSF 466
+++ + NALLDMY CG++R A F ++ + VSWN++++G + G E+AM +
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMY 389
Query: 467 SEM--QWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTK 524
+ RP ++TF ++A A GK +H V + YE +V L+ +Y K
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 525 CCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGI 584
E A +VF DV++ MI+G A++ F M +E + D + +
Sbjct: 450 NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSV 509
Query: 585 LLAC-----IHEGNVKLALQFFDSMRCKYGII-------------------------PQL 614
+ AC + +G V L C + P L
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDL 569
Query: 615 EHYECMIKLYCRYGYMKELEDFVNRM---PFNPTVPMLRKIFDKCRKNGYATLGEWAARR 671
+ + M+ Y ++G +++ F ++ F P + C G G++ +
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ 629
Query: 672 LNELNPWAPFQ 682
+ E A F+
Sbjct: 630 MKEQGIKAGFK 640
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 181/389 (46%), Gaps = 24/389 (6%)
Query: 315 SIVSGYAISGRIREARELFNEMPERNVIS---------WNAMLAGYTRSLLWKEALDFVF 365
+++S Y + +AR++F++MP+RN+++ + +M + ++ + +F
Sbjct: 27 NLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIF 86
Query: 366 LM--RKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFI---HRNDYSSNIFVSNALLDM 420
M + + ++T C ++ +K +++H + + + + +N L+ M
Sbjct: 87 FMPLNEIASSVVELT-----RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 421 YRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQ-SEEAMTSFSEMQWE-TRPSKF 478
Y +CG+L AR F +M R+ VS+NA+ + Y+R + A + M +E +P+
Sbjct: 142 YVRCGSLEQARKVFDKMPH-RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 479 TFETLLAACANISSLEQGKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKES 538
TF +L+ CA + + G ++ +I+ Y NVV + +++ +Y+ C LE A R+F
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 539 SSLDVIICNSMILGFCHNERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLAL 598
++ D + N+MI+G N++ + L F M G+ P T+ +L C G+ L
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG- 319
Query: 599 QFFDSMRCKYGIIPQLEHYECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRK 658
+ + + L ++ +YC G M+E R+ NP + I C +
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSE 378
Query: 659 NGYATLGEWAARRLNELNPWAPFQFKITT 687
NG+ RRL ++ P ++ +
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 401 FIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWN-AVLTGYARRGQS 459
F+ + + + +N L+ MY +C +L AR F +M QR + + + Y G S
Sbjct: 12 FVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS 71
Query: 460 EEA----MTSFSEMQW-ETRPSKFTFETLLAACANISSLEQGKQIHCFVIR---NCYEIN 511
+ + SF + + + L C +I+ L++ +QIH V+ +
Sbjct: 72 LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131
Query: 512 VVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHN-ERGREALEVFGLMK 570
L+ +Y +C LE A +VF + +V+ N++ + N + A + M
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 571 KEGIKPDHITFHGILLAC 588
E +KP+ TF ++ C
Sbjct: 192 FEYVKPNSSTFTSLVQVC 209
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 262 bits (670), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 172/601 (28%), Positives = 302/601 (50%), Gaps = 32/601 (5%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQ 143
I+ Y C +L A +F+E+ +D SW M+ AY NGF LELF M + V N+
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
+ A+ L+++A +L +H V++G G+V + +SL+ Y KC + A ++F +
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEG 263
I++++ VSW+ ++ Y AG EA+ +F M+R I+P T + L C+ +++ G
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG 420
Query: 264 MQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAIS 323
IH IK D E + LE A T+++S YA
Sbjct: 421 KSIHCYAIKADIESE----------------LETA---------------TAVISMYAKC 449
Query: 324 GRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLIL 383
GR A + F +P ++ +++NA+ GYT+ +A D M+ D T+ +L
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
Query: 384 NVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDK 443
CA S+ G V+G I ++ + S V++AL++M+ KC L +A + F + +
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 444 VSWNAVLTGYARRGQSEEAMTSFSEMQWET-RPSKFTFETLLAACANISSLEQGKQIHCF 502
VSWN ++ GY GQ+EEA+ +F +M+ E +P+ TF ++ A A +S+L G +H
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 503 VIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREA 562
+I+ + +LV++Y KC +E + + F E S+ ++ N+M+ + + A
Sbjct: 630 LIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 563 LEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIK 622
+ +F M++ +KPD ++F +L AC H G V+ + F+ M ++ I ++EHY CM+
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVD 749
Query: 623 LYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQ 682
L + G E + + RM +V + + + R + L A +L +L P P
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH 809
Query: 683 F 683
+
Sbjct: 810 Y 810
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 156/607 (25%), Positives = 282/607 (46%), Gaps = 39/607 (6%)
Query: 32 GHLKSDEPVSYSLYAHLFQL--CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGK 89
G++ ++ + Y+ F L CA S + ++ + V++ +E Y K
Sbjct: 88 GYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCK 147
Query: 90 CGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANV 149
+L AR +FD+M +D +WN M+ QNG L LF DM V + ++ N+
Sbjct: 148 ARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNL 207
Query: 150 LRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNA 209
+ + ++ + V + LHGL++K+GF S L+D Y C + A +F+++ K+
Sbjct: 208 IPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDE 265
Query: 210 VSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGV 269
SW ++ Y G +E + +F M D+R A+AL A +++ +G+ IH
Sbjct: 266 SSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325
Query: 270 IIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREA 329
++ GD V SL MY KCG LE A L ++R+++SW+++++ Y +G+ EA
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEA 385
Query: 330 RELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGL 389
LF +M MR K + VTL +L CAG+
Sbjct: 386 ISLFRDM------------------------------MRIHIKP-NAVTLTSVLQGCAGV 414
Query: 390 SEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAV 449
+ ++GK +H + + D S + + A++ MY KCG A F ++ +D V++NA+
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI-KDAVAFNAL 473
Query: 450 LTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCY 508
GY + G + +A + M+ P T +L CA S +G ++ +I++ +
Sbjct: 474 AQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGF 533
Query: 509 EINVVCRGALVEVYTKCCCLEYAIRVFKESS-SLDVIICNSMILGFCHNERGREALEVFG 567
+ AL+ ++TKC L AI +F + + N M+ G+ + + EA+ F
Sbjct: 534 DSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFR 593
Query: 568 LMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRY 627
MK E +P+ +TF I+ A +++ + S+ + G Q ++ +Y +
Sbjct: 594 QMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL-IQCGFCSQTPVGNSLVDMYAKC 652
Query: 628 GYMKELE 634
G ++ E
Sbjct: 653 GMIESSE 659
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/554 (24%), Positives = 253/554 (45%), Gaps = 47/554 (8%)
Query: 39 PVSYSLYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARG 98
P++Y+ + + C + + +++ + +L+ P N+ I Y D +R
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQ---VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRV 54
Query: 99 LFDEMPERDGGS--WNAMLGAYTQNGFPGRTLELFLDMNHS-GVSANQITYANVLRSSAE 155
+FD + RD G WN+M+ YT+ G L F M+ G+ ++ ++ L++ A
Sbjct: 55 IFDSV--RDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG 112
Query: 156 ELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVI 215
++ ++H LI + G +V + ++LV+ Y K + AR++FD + K+ V+WN +
Sbjct: 113 SMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTM 172
Query: 216 VRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDF 275
V G A+++F M + + + N + A S L +HG++IK F
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 276 EGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNE 335
L +MY C L A + ++ ++ SW ++++ YA +G E ELF+
Sbjct: 233 IF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD- 289
Query: 336 MPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMG 395
LMR +++V L A + ++ G
Sbjct: 290 ------------------------------LMRNYDVRMNKVAAASALQAAAYVGDLVKG 319
Query: 396 KEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYAR 455
+H + + ++ V+ +L+ MY KCG L A F + + RD VSW+A++ Y +
Sbjct: 320 IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI-EDRDVVSWSAMIASYEQ 378
Query: 456 RGQSEEAMTSFSE-MQWETRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEINVVC 514
GQ +EA++ F + M+ +P+ T ++L CA +++ GK IHC+ I+ E +
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 515 RGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMKKEGI 574
A++ +Y KC A++ F+ D + N++ G+ +A +V+ MK G+
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 575 KPDHITFHGILLAC 588
PD T G+L C
Sbjct: 499 CPDSRTMVGMLQTC 512
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 240/529 (45%), Gaps = 55/529 (10%)
Query: 144 ITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDD 203
I Y N+L E Q+HG ++ G + + L++AY +R +FD
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDS 58
Query: 204 IQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRED-IRPLNFTFANALFACSFLSSPYE 262
+++ V WN ++R Y AG +EA+ F M E I P ++F AL AC+ +
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G++IH +I ++ E D + +L EMY K R+++S
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCK---------------ARDLVS---------- 153
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
AR++F++M ++V++WN M++G ++ AL MR DID V+L +
Sbjct: 154 ------ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNL 207
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFV-SNALLDMYRKCGNLRSARIWFYQMSQRR 441
+ + L + + + +HG + + + IF S+ L+DMY C +L +A F ++ R+
Sbjct: 208 IPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEV-WRK 263
Query: 442 DKVSWNAVLTGYARRGQSEEAMTSFSEMQ-WETRPSKFTFETLLAACANISSLEQGKQIH 500
D+ SW ++ YA G EE + F M+ ++ R +K + L A A + L +G IH
Sbjct: 264 DESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIH 323
Query: 501 CFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGR 560
+ ++ +V +L+ +Y+KC LE A ++F DV+ ++MI + +
Sbjct: 324 DYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHD 383
Query: 561 EALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRC---KYGIIPQLEHY 617
EA+ +F M + IKP+ +T +L C +L S+ C K I +LE
Sbjct: 384 EAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG----KSIHCYAIKADIESELETA 439
Query: 618 ECMIKLYCRYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGE 666
+I +Y + G R+P V GY +G+
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAF------NALAQGYTQIGD 482
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 45 YAHLFQLCASSKAIVEARKLESNLVT--FYPTPPVFLLNRAIECYGKCGNLDDARGLFDE 102
+ ++ + A A+ + S+L+ F PV N ++ Y KCG ++ + F E
Sbjct: 607 FVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG--NSLVDMYAKCGMIESSEKCFIE 664
Query: 103 MPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRS 152
+ + SWN ML AY +G + LFL M + + + +++ +VL +
Sbjct: 665 ISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 282/586 (48%), Gaps = 37/586 (6%)
Query: 95 DARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSA 154
DAR +F EM +R WN +L + ++ L F M + T L++
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 155 EELELGVSKQLHGLIVKRGFCG-NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWN 213
E E+ + +HG + K G ++ + SSL+ Y KC M +A RMFD+++ + V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 214 VIVRRYLVAGNGKEAVVMFFKM-LREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIK 272
+V + G+ +AV F +M + D+ P T + AC+ LS+ G +HG +I+
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 273 IDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREAREL 332
F D ++ SL Y K S +EA L
Sbjct: 192 RGFSNDLSLVNSLLNCYAK-------------------------------SRAFKEAVNL 220
Query: 333 FNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEI 392
F + E++VISW+ ++A Y ++ EAL M + + T+ +L CA ++
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL 280
Query: 393 KMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG 452
+ G++ H R + + VS AL+DMY KC + A F ++ R+D VSW A+++G
Sbjct: 281 EQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISG 339
Query: 453 YARRGQSEEAMTSFSEMQWE--TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
+ G + ++ FS M E TRP +L +C+ + LEQ K H +VI+ ++
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLM- 569
N +LVE+Y++C L A +VF + D ++ S+I G+ + +G +ALE F M
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 570 KKEGIKPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYGY 629
K +KP+ +TF IL AC H G + L+ F M Y + P LEHY ++ L R G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 630 MKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNEL 675
+ + RMPF+PT +L + CR + + E A++L EL
Sbjct: 520 LDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFEL 565
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 234/458 (51%), Gaps = 37/458 (8%)
Query: 84 IECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDM-NHSGVSAN 142
I Y KCG + +A +FDE+ + D +W++M+ + +NG P + +E F M S V+ +
Sbjct: 103 IYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPD 162
Query: 143 QITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDARRMFD 202
++T ++ + + + + +HG +++RGF ++ L +SL++ Y K +A +F
Sbjct: 163 RVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 222
Query: 203 DIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYE 262
I K+ +SW+ ++ Y+ G EA+++F M+ + P T L AC+ +
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 263 GMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAI 322
G + H + I+ E + V +L +MY+KC E+A + + ++++SW +++SG+ +
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 323 SGRIREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLI 382
+G + E F+ M +L TR D + + +
Sbjct: 343 NGMAHRSIEEFSIM----------LLENNTRP--------------------DAILMVKV 372
Query: 383 LNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRD 442
L C+ L ++ K H ++ + + SN F+ +L+++Y +CG+L +A F ++ +D
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KD 431
Query: 443 KVSWNAVLTGYARRGQSEEAMTSFSEM--QWETRPSKFTFETLLAACANISSLEQGKQIH 500
V W +++TGY G+ +A+ +F+ M E +P++ TF ++L+AC++ + +G +I
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 501 CFVIRNCYEI--NVVCRGALVEVYTKCCCLEYAIRVFK 536
++ N Y + N+ LV++ + L+ AI + K
Sbjct: 492 KLMV-NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 79 LLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSG 138
L+N + CY K +A LF + E+D SW+ ++ Y QNG L +F DM G
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 139 VSANQITYANVLRSSAEELELGVSKQLHGLIVKRGFCGNVILESSLVDAYGKCMVMTDAR 198
N T VL++ A +L ++ H L +++G V + ++LVD Y KC +A
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 199 RMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKMLRE-DIRPLNFTFANALFACSFL 257
+F I K+ VSW ++ + + G ++ F ML E + RP L +CS L
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 258 SSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIV 317
+ H +IK F+ + + SL E+Y +CG L +A + + ++ + WTS++
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439
Query: 318 SGYAISGRIREARELFNEMPER-----NVISWNAMLAGYTRSLLWKEALDFVFLM 367
+GY I G+ +A E FN M + N +++ ++L+ + + L E L LM
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 52 CASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSW 111
C+ + +A+ S ++ + F+ +E Y +CG+L +A +F+ + +D W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 112 NAMLGAYTQNGFPGRTLELFLDM-NHSGVSANQITYANVLRS 152
+++ Y +G + LE F M S V N++T+ ++L +
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSA 477
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 266/542 (49%), Gaps = 38/542 (7%)
Query: 153 SAEELELGVSKQLHGLIVKR-GFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVS 211
SA + LG + +H IVK L + L++ Y K AR + +N VS
Sbjct: 18 SASSMRLG--RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS 75
Query: 212 WNVIVRRYLVAGNGKEAVVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVII 271
W ++ G+ A+V FF+M RE + P +FTF A A + L P G QIH + +
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 272 KIDFEGDDVVLGSLTEMYVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARE 331
K D V S +MY K RL D +AR+
Sbjct: 136 KCGRILDVFVGCSAFDMYCKT-RLRD------------------------------DARK 164
Query: 332 LFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSE 391
LF+E+PERN+ +WNA ++ +EA++ R+ + +T LN C+
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 392 IKMGKEVHGFIHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLT 451
+ +G ++HG + R+ + +++ V N L+D Y KC +RS+ I F +M + + VSW +++
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVA 283
Query: 452 GYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQGKQIHCFVIRNCYEI 510
Y + + E+A + + + S F ++L+ACA ++ LE G+ IH ++ C E
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 511 NVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCHNERGREALEVFGLMK 570
+ ALV++Y KC C+E + + F E +++ NS+I G+ H + AL +F M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 571 KEGI--KPDHITFHGILLACIHEGNVKLALQFFDSMRCKYGIIPQLEHYECMIKLYCRYG 628
G P+++TF +L AC G V+ ++ FDSMR YGI P EHY C++ + R G
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 629 YMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKITTN 688
++ +F+ +MP PT+ + + + CR +G LG AA L +L+P + +N
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Query: 689 RF 690
F
Sbjct: 524 TF 525
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 213/446 (47%), Gaps = 41/446 (9%)
Query: 58 IVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDGGSWNAMLGA 117
+V AR ++ T PP FL N I Y K + + AR + P R+ SW +++
Sbjct: 27 VVHARIVK----TLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 118 YTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVS-KQLHGLIVKRGFCG 176
QNG L F +M GV N T+ ++ A L L V+ KQ+H L VK G
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS-LRLPVTGKQIHALAVKCGRIL 141
Query: 177 NVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEAVVMFFKML 236
+V + S D Y K + DAR++FD+I +N +WN + + G +EA+ F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 237 REDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEMYVKCGRLE 296
R D P + TF L ACS GMQ+HG++++ F+ D V L + Y KC ++
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 297 DARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEMPERNVISWNAMLAGYTRSLL 356
+ + + +N +SW S+V+ Y + +A L Y RS
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL------------------YLRS-- 301
Query: 357 WKEALDFVFLMRKTTKDIDQVTLGLILNVCAGLSEIKMGKEVHGFIHRNDYSSNIFVSNA 416
RK + + +L+ CAG++ +++G+ +H + IFV +A
Sbjct: 302 -----------RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 350
Query: 417 LLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE---T 473
L+DMY KCG + + F +M + ++ V+ N+++ GYA +GQ + A+ F EM
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 474 RPSKFTFETLLAACANISSLEQGKQI 499
P+ TF +LL+AC+ ++E G +I
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 208/431 (48%), Gaps = 12/431 (2%)
Query: 49 FQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEMPERDG 108
F+ AS + V +++ + V VF+ A + Y K DDAR LFDE+PER+
Sbjct: 115 FKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNL 174
Query: 109 GSWNAMLGAYTQNGFPGRTLELFLDMNHSGVSANQITYANVLRSSAEELELGVSKQLHGL 168
+WNA + +G P +E F++ N IT+ L + ++ L L + QLHGL
Sbjct: 175 ETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 234
Query: 169 IVKRGFCGNVILESSLVDAYGKCMVMTDARRMFDDIQNKNAVSWNVIVRRYLVAGNGKEA 228
+++ GF +V + + L+D YGKC + + +F ++ KNAVSW +V Y+ ++A
Sbjct: 235 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
Query: 229 VVMFFKMLREDIRPLNFTFANALFACSFLSSPYEGMQIHGVIIKIDFEGDDVVLGSLTEM 288
V++ + ++ + +F ++ L AC+ ++ G IH +K E V +L +M
Sbjct: 295 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 289 YVKCGRLEDARGLLDQPDERNIISWTSIVSGYAISGRIREARELFNEM------PERNVI 342
Y KCG +ED+ D+ E+N+++ S++ GYA G++ A LF EM P N +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 343 SWNAMLAGYTRSLLWKEALDFVFLMRKTTK-DIDQVTLGLILNVCAGLSEIKMGKEVHGF 401
++ ++L+ +R+ + + MR T + I+++ L M + + F
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM---LGRAGMVERAYEF 471
Query: 402 IHRNDYSSNIFVSNALLDMYRKCGNLRSARIWFYQMSQRRDKVSWNAVLTG--YARRGQS 459
I + I V AL + R G + + + + K S N VL +A G+
Sbjct: 472 IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRW 531
Query: 460 EEAMTSFSEMQ 470
EA T E++
Sbjct: 532 AEANTVREELK 542
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 378 TLGLILNVCAGLSEIKMGKEVHGFIHRN-DYSSNIFVSNALLDMYRKCGNLRSARIWFYQ 436
LGL+L S +++G+ VH I + D F++N L++MY K + SAR+ +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL-VLR 66
Query: 437 MSQRRDKVSWNAVLTGYARRGQSEEAMTSFSEMQWE-TRPSKFTFETLLAACANISSLEQ 495
++ R+ VSW ++++G A+ G A+ F EM+ E P+ FTF A A++
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 496 GKQIHCFVIRNCYEINVVCRGALVEVYTKCCCLEYAIRVFKESSSLDVIICNSMILGFCH 555
GKQIH ++ ++V + ++Y K + A ++F E ++ N+ I
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 556 NERGREALEVFGLMKKEGIKPDHITFHGILLACIHEGNVKLALQF 600
+ R REA+E F ++ P+ ITF L AC ++ L +Q
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL 231
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 44 LYAHLFQLCASSKAIVEARKLESNLVTFYPTPPVFLLNRAIECYGKCGNLDDARGLFDEM 103
+ + + CA + R + ++ V +F+ + ++ YGKCG ++D+ FDEM
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 104 PERDGGSWNAMLGAYTQNGFPGRTLELFLDMNHSGV--SANQITYANVLRS 152
PE++ + N+++G Y G L LF +M G + N +T+ ++L +
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,642,833
Number of Sequences: 539616
Number of extensions: 10714804
Number of successful extensions: 39186
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 29067
Number of HSP's gapped (non-prelim): 2823
length of query: 693
length of database: 191,569,459
effective HSP length: 125
effective length of query: 568
effective length of database: 124,117,459
effective search space: 70498716712
effective search space used: 70498716712
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)