BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043639
(261 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255541150|ref|XP_002511639.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
gi|223548819|gb|EEF50308.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
Length = 363
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 169/213 (79%), Positives = 188/213 (88%), Gaps = 4/213 (1%)
Query: 46 TRHK----KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
T HK ++YV FPGKPRW R +PM L+YAFS EN+I+YL I+D++ VFKRAFS+W SV
Sbjct: 133 TGHKLHVSRNYVYFPGKPRWGRDIPMNLTYAFSPENLISYLKISDLQEVFKRAFSRWESV 192
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
IPVSFIE DY +ADI+IGFYNGDHGDGEPFDG+LGVLAHSFSPESGKFHLDAAETWAVD
Sbjct: 193 IPVSFIEISDYSYADIKIGFYNGDHGDGEPFDGILGVLAHSFSPESGKFHLDAAETWAVD 252
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
F SEKS VAVDLESVAVHEIGHLLGL HS VKEAVMYP+LKPR KKVDL++DDIQGVQAL
Sbjct: 253 FESEKSKVAVDLESVAVHEIGHLLGLAHSSVKEAVMYPSLKPRKKKVDLSVDDIQGVQAL 312
Query: 222 YGSNPNFTIGSLVESDISTNLAVDLRIKSSMWA 254
YGSNPN+T+GSL+ESDISTN AV LRI SS WA
Sbjct: 313 YGSNPNYTLGSLLESDISTNQAVRLRITSSPWA 345
>gi|147812598|emb|CAN66084.1| hypothetical protein VITISV_024635 [Vitis vinifera]
Length = 353
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/233 (68%), Positives = 185/233 (79%), Gaps = 5/233 (2%)
Query: 29 TPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIK 88
+P+ ++ D P A H YV FPGKPRW R +PMTL+YAFS EN++ YL + DI+
Sbjct: 120 SPRCGMR--DAMQPMHAAMH---YVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIR 174
Query: 89 AVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG 148
FKRAF++WASVIPVSF ETD Y FADI+IGFY GDHGDGEPFDGVLGVLAH+FSPESG
Sbjct: 175 GGFKRAFARWASVIPVSFTETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESG 234
Query: 149 KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV 208
KFHLDAAETWAVD SEKS VA+DLESVA HEIGHLLGL HSPVKE+VMYP+LKPR KK
Sbjct: 235 KFHLDAAETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKA 294
Query: 209 DLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMMLHYL 261
DL LDDI+ VQALYGSNPNF S +ESDIS+N A+D R++S +++L L
Sbjct: 295 DLKLDDIEAVQALYGSNPNFKFASSMESDISSNQAIDFRVRSYRKLSILLPIL 347
>gi|224136988|ref|XP_002326995.1| predicted protein [Populus trichocarpa]
gi|222835310|gb|EEE73745.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/234 (69%), Positives = 191/234 (81%), Gaps = 5/234 (2%)
Query: 30 PKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY-LHITDIK 88
P+ + + A+RH Y FPGKPRWTR +PMTL+Y+FSKEN+IN L ++DI+
Sbjct: 60 PRCGVPDDTMFHKLHASRH---YFYFPGKPRWTRSIPMTLTYSFSKENLINVSLSLSDIE 116
Query: 89 AVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG 148
VFK AF+KW SVIPVSF+ETDDY FADI+IGFY+GDHGDGEPFDGVLGVLAHSFSPESG
Sbjct: 117 EVFKGAFAKWGSVIPVSFVETDDYAFADIKIGFYSGDHGDGEPFDGVLGVLAHSFSPESG 176
Query: 149 KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV 208
+FHLDA ETWA+DF EKS VAV LESVAVHEIGHLLGL HS ++AVMYP+LKPR KK+
Sbjct: 177 RFHLDARETWAIDFDLEKSKVAVHLESVAVHEIGHLLGLGHSSDEKAVMYPSLKPRKKKL 236
Query: 209 DLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL-RIKSSMWATMMLHYL 261
DL++DDIQGVQALYGSNPNFT+GSL+ESDISTN A DL RI+ S W ++ L
Sbjct: 237 DLSVDDIQGVQALYGSNPNFTLGSLLESDISTNEAADLIRIRLSQWWVTLIMAL 290
>gi|225453480|ref|XP_002274477.1| PREDICTED: metalloendoproteinase 1 [Vitis vinifera]
gi|297734565|emb|CBI16616.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/222 (70%), Positives = 179/222 (80%), Gaps = 5/222 (2%)
Query: 29 TPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIK 88
+P+ ++ D P A H YV FPGKPRW R +PMTL+YAFS EN++ YL + DI+
Sbjct: 120 SPRCGMR--DAMQPMHAAMH---YVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIR 174
Query: 89 AVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG 148
FK AF++WASVIPVSF ETD Y FADI+IGFY GDHGDGEPFDGVLGVLAH+FSPESG
Sbjct: 175 GAFKLAFARWASVIPVSFSETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESG 234
Query: 149 KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV 208
KFHLDAAETWAVD SEKS VA+DLESVA HEIGHLLGL HSPVKE+VMYP+LKPR KK
Sbjct: 235 KFHLDAAETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKA 294
Query: 209 DLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKS 250
DL LDDI+ VQALYGSNPNF S +ESDIS+N A+D R++S
Sbjct: 295 DLKLDDIEAVQALYGSNPNFKFASSMESDISSNQAIDFRVRS 336
>gi|15225398|ref|NP_182030.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
gi|26452204|dbj|BAC43190.1| putative metalloproteinase [Arabidopsis thaliana]
gi|31711730|gb|AAP68221.1| At2g45040 [Arabidopsis thaliana]
gi|330255405|gb|AEC10499.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
Length = 342
Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 177/215 (82%), Gaps = 1/215 (0%)
Query: 38 DKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
D +P A H K YV FPG+PRWTR VP+ L+YAFS+EN+ YL TDI+ VF+RAF
Sbjct: 110 DDVEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFG 169
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAE 156
KWASVIPVSFIET+DY ADI+IGF+NGDHGDGEPFDGVLGVLAH+FSPE+G+ HLD AE
Sbjct: 170 KWASVIPVSFIETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAE 229
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQ 216
TWAVDF EKS VAVDLESVAVHEIGH+LGL HS VK+A MYPTLKPR KKV+L +DD+
Sbjct: 230 TWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVV 289
Query: 217 GVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSS 251
GVQ+LYG+NPNFT+ SL+ S+ STNLA RI+S
Sbjct: 290 GVQSLYGTNPNFTLNSLLASETSTNLADGSRIRSQ 324
>gi|359495960|ref|XP_003635123.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 302
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/239 (63%), Positives = 185/239 (77%), Gaps = 12/239 (5%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
SP+C +TP + TRH + F GKPRW R PMTL+Y+FS+ENMI
Sbjct: 64 SPRCGVSDTTP---------LEDVHETRH---FAYFYGKPRWARVPPMTLTYSFSRENMI 111
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
L+ +++K+VF+RAFS+WASVIPV+F ET+D+ ADI+IGFY+GDHGDGEPFDGVLGVL
Sbjct: 112 ESLNSSEMKSVFERAFSRWASVIPVNFTETEDFGSADIKIGFYSGDHGDGEPFDGVLGVL 171
Query: 140 AHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
AH+FSP++G+FH D AETW VDF SEKS VAVDLESVA HEIGH+LGL HS VKEAVMYP
Sbjct: 172 AHAFSPQNGRFHFDRAETWTVDFESEKSRVAVDLESVATHEIGHILGLAHSSVKEAVMYP 231
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMML 258
+L PR KKVDL DD++GVQALYG NPNF SL+ESDIS+N AV L+I+ S WAT ++
Sbjct: 232 SLSPRRKKVDLKRDDVEGVQALYGPNPNFKFSSLMESDISSNRAVGLQIRPSKWATTLV 290
>gi|297824541|ref|XP_002880153.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
gi|297325992|gb|EFH56412.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 177/216 (81%), Gaps = 1/216 (0%)
Query: 38 DKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
D +P A H K YV FPG+PRWTR VP+ L+YAFS+EN+ YL TDI+ VF+RAF
Sbjct: 103 DDVEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFG 162
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAE 156
KWASVIPV+FIET+DY ADI+IGF+NGDHGDGEPFDGVLGVLAH+FSPE+G+ HLD AE
Sbjct: 163 KWASVIPVTFIETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAE 222
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQ 216
TWAVDF EKS VAVDLESVAVHEIGH+LGL HS VK+A MYPTLKPR KKV+L +DD+
Sbjct: 223 TWAVDFNEEKSTVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVV 282
Query: 217 GVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSM 252
GVQ+LYG+NPNFT+ SL+ S+ STNLA D ++ S
Sbjct: 283 GVQSLYGTNPNFTLSSLLASETSTNLADDGSMRRSQ 318
>gi|3128477|gb|AAC31167.1| metalloproteinase [Arabidopsis thaliana]
Length = 341
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 177/215 (82%), Gaps = 2/215 (0%)
Query: 38 DKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
D +P A H K YV FPG+PRWTR VP+ L+YAFS+EN+ YL TDI+ VF+RAF
Sbjct: 110 DDVEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIR-VFRRAFG 168
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAE 156
+WASVIPVSFIET+DY ADI+IGF+NGDHGDGEPFDGVLGVLAH+FSPE+G+ HLD AE
Sbjct: 169 EWASVIPVSFIETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAE 228
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQ 216
TWAVDF EKS VAVDLESVAVHEIGH+LGL HS VK+A MYPTLKPR KKV+L +DD+
Sbjct: 229 TWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVV 288
Query: 217 GVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSS 251
GVQ+LYG+NPNFT+ SL+ S+ STNLA RI+S
Sbjct: 289 GVQSLYGTNPNFTLNSLLASETSTNLADGSRIRSQ 323
>gi|147773502|emb|CAN66781.1| hypothetical protein VITISV_013507 [Vitis vinifera]
Length = 373
Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/232 (63%), Positives = 180/232 (77%), Gaps = 12/232 (5%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
SP+C +TP + TRH + F GKPRW R PMTL+Y+FS+ENMI
Sbjct: 116 SPRCGVSDTTP---------LEDVHETRH---FAYFYGKPRWARVPPMTLTYSFSRENMI 163
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
L+ +++K+VF+RAFS+WASVIPV+F ET+D+ ADI+IGFY+GDHGDGEPFDGVLGVL
Sbjct: 164 ESLNSSEMKSVFERAFSRWASVIPVNFTETEDFGSADIKIGFYSGDHGDGEPFDGVLGVL 223
Query: 140 AHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
AH+FSP++G+FH D AETW VDF SEKS VA+DLESVA HEIGH+LGL HS VKEAVMYP
Sbjct: 224 AHAFSPQNGRFHFDRAETWTVDFESEKSRVAIDLESVATHEIGHILGLAHSSVKEAVMYP 283
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSS 251
+L PR KKVDL DD++GVQALYG NPNF SL+ESDIS+N AV L+I+ S
Sbjct: 284 SLSPRRKKVDLKRDDVEGVQALYGPNPNFKFSSLMESDISSNRAVGLQIRPS 335
>gi|356523082|ref|XP_003530171.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 381
Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 139/196 (70%), Positives = 167/196 (85%)
Query: 46 TRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVS 105
TR K++V FPGKPRW+R +PMTL+YAFS+ENMI+ L + +I+ F+RAF++WASVIPVS
Sbjct: 141 TRLTKNFVFFPGKPRWSRSMPMTLTYAFSRENMIHSLSMKEIREAFQRAFTRWASVIPVS 200
Query: 106 FIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE 165
F+E D++ DI+IGFYNG+HGDGEPFDGVLGVLAHSFSPE G+ HLDAAETWAVDF S
Sbjct: 201 FVEVSDFELTDIKIGFYNGEHGDGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFRST 260
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
S VAVDLESVA HEIGHLLGL+HS VKEAVMYP+L+PRDK+ DL +DDI+GVQ+LYGSN
Sbjct: 261 TSEVAVDLESVATHEIGHLLGLSHSSVKEAVMYPSLRPRDKRADLNIDDIKGVQSLYGSN 320
Query: 226 PNFTIGSLVESDISTN 241
PNF +ESD+S N
Sbjct: 321 PNFRSEWSLESDMSAN 336
>gi|357512801|ref|XP_003626689.1| Matrix metalloproteinase-27 [Medicago truncatula]
gi|355520711|gb|AET01165.1| Matrix metalloproteinase-27 [Medicago truncatula]
Length = 379
Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 141/194 (72%), Positives = 169/194 (87%), Gaps = 1/194 (0%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
K ++V FPGKPRW+R +PMTL+Y FS + MI+ L I +I+ FKRAFS+W+SVIPVSF+E
Sbjct: 133 KTNFVYFPGKPRWSRDMPMTLTYGFSSDYMIHNLSIQEIREAFKRAFSRWSSVIPVSFVE 192
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
++DY FADI+IGFY+GDHGDGEPFDGVLGVLAHSFSPE G+ HLDAAETWAVDFG KS
Sbjct: 193 SEDYGFADIKIGFYSGDHGDGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFGVTKSE 252
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
VA+DLESVA HEIGHLLGL+HS +KEAVMYP+L+PRDK+ DL +DDI+GVQ+LYGSNPNF
Sbjct: 253 VAIDLESVATHEIGHLLGLSHSSLKEAVMYPSLRPRDKRADLNIDDIKGVQSLYGSNPNF 312
Query: 229 -TIGSLVESDISTN 241
+ S +ESDISTN
Sbjct: 313 RSQWSSLESDISTN 326
>gi|356495601|ref|XP_003516663.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 349
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 164/207 (79%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R + Y F GKPRWTR PMTL+YAFS NMI+ + + +I+AVF+RAF++WASVIPVSF
Sbjct: 127 RATRRYAYFNGKPRWTRGTPMTLTYAFSPYNMIDRVSVPEIRAVFERAFARWASVIPVSF 186
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEK 166
ET +YD ADI IGFY GDHGDGEPFDGVLGVL H+FSP++G+FHLDAAETW+VDF E
Sbjct: 187 QETPEYDRADITIGFYLGDHGDGEPFDGVLGVLGHAFSPQNGRFHLDAAETWSVDFEREA 246
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
S VAVDLESVA HEIGH+LGL HS VKEAVMYP+L PR KKVDL +DD+ GVQALYGSNP
Sbjct: 247 SRVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRRKKVDLKIDDVAGVQALYGSNP 306
Query: 227 NFTIGSLVESDISTNLAVDLRIKSSMW 253
NFT SL++S S N AV L W
Sbjct: 307 NFTFSSLLQSQNSLNAAVGLETGFYKW 333
>gi|224138608|ref|XP_002326645.1| predicted protein [Populus trichocarpa]
gi|222833967|gb|EEE72444.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 168/212 (79%), Gaps = 5/212 (2%)
Query: 44 EATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
+AT+H + F GKPRW R P+ L+YAFS+ NMI+Y+ + DIK VFKRAFS+WA VIP
Sbjct: 141 QATKH---FSYFYGKPRWGRQAPVILTYAFSQNNMIDYISLKDIKTVFKRAFSRWAQVIP 197
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFG 163
VSF+E +DY ADIRIGFY DHGDG+PFDGVLGVLAH+FSPE+G+FHLDA+ETWA+DF
Sbjct: 198 VSFMEIEDYPSADIRIGFYYRDHGDGQPFDGVLGVLAHAFSPENGRFHLDASETWALDFE 257
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+ KS VAVDLESVA HEIGH+LGL HS VKEAVMYP+L PR KKVDL +DD+ GVQALYG
Sbjct: 258 TVKSRVAVDLESVATHEIGHILGLAHSSVKEAVMYPSLSPRSKKVDLKIDDVNGVQALYG 317
Query: 224 SNPNFTIGSLVESDISTNLAVDLR--IKSSMW 253
SNPNFT SL+ S+ S N LR SS W
Sbjct: 318 SNPNFTFSSLLASENSFNKGSGLRNTRSSSKW 349
>gi|356540528|ref|XP_003538740.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 362
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 165/204 (80%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+ + F GKPRWTR PMTL+YAFS NMI+ + + +I+AVF+RAF++WASVIPVSF ET
Sbjct: 144 RRFAYFNGKPRWTRGTPMTLTYAFSPYNMIDRVSLPEIRAVFERAFARWASVIPVSFQET 203
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
+YD ADI IGFY GDHGDGEPFDGVLGVLAH+FSP++G+FHLDAAETW+VDF E+S V
Sbjct: 204 PEYDRADITIGFYLGDHGDGEPFDGVLGVLAHAFSPQNGRFHLDAAETWSVDFEREESRV 263
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLESVA HEIGH+LGL HS VKEAVMYP+L PR KKVDL +DD+ GVQALYGSNPNFT
Sbjct: 264 AVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRRKKVDLRIDDVAGVQALYGSNPNFT 323
Query: 230 IGSLVESDISTNLAVDLRIKSSMW 253
SL++S S N AV L W
Sbjct: 324 FSSLLQSQNSLNAAVGLETGFYKW 347
>gi|255588477|ref|XP_002534615.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
gi|223524902|gb|EEF27766.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
Length = 325
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 175/219 (79%), Gaps = 4/219 (1%)
Query: 37 SDKY-DPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAF 95
SDK D T+H Y F GKPRWT+ P+ L+Y+FS ENMI+Y+ + DIK VF+RAF
Sbjct: 96 SDKTTDSLHVTKH---YAYFYGKPRWTKGSPIALTYSFSPENMIDYISLDDIKIVFRRAF 152
Query: 96 SKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAA 155
S+WASVIPV+F+E ++Y ADI+IG+Y+ DHGDGEPFDGVLGVLAH+FSPE+G+FHLD A
Sbjct: 153 SRWASVIPVNFMEVEEYKSADIKIGWYHHDHGDGEPFDGVLGVLAHAFSPENGRFHLDEA 212
Query: 156 ETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDI 215
ETWAVDF KS VAVDLESVA HEIGH+LGL HS VKEAVMYP+L PR KKVDL +DD+
Sbjct: 213 ETWAVDFDKVKSRVAVDLESVATHEIGHILGLAHSSVKEAVMYPSLSPRTKKVDLKIDDV 272
Query: 216 QGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWA 254
+GVQALYGSNPNF SL+ES+ S + + ++ + S+W+
Sbjct: 273 EGVQALYGSNPNFKFSSLMESENSIDKGIGIKCRISIWS 311
>gi|449433004|ref|XP_004134288.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
gi|449478237|ref|XP_004155259.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 257
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 145/231 (62%), Positives = 176/231 (76%), Gaps = 13/231 (5%)
Query: 20 SPQCIAVRST-PK-------FKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSY 71
+P C+ +T P+ F+ S ++P R YV FPGKPRWTR +PM L+Y
Sbjct: 15 TPSCLPYPTTLPQNPTSAVIFRSDSSSLHNPHATER----YVFFPGKPRWTRRMPMVLTY 70
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEP 131
AF K+N ++ L + D++AVF++AFSKWA VIPVSF ETDDY +ADI+IGFY GDH DG+
Sbjct: 71 AFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQA 130
Query: 132 FDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
FDGVLGVLAHSFSPE G+ HLDAAETWAVDF EKS VAVDLESVA HEIGHLLGL HS
Sbjct: 131 FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSS 190
Query: 192 VKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSL-VESDISTN 241
V+E+VMYP+LKPR+KK +L +DD++GVQALYGSNPNF SL +ESD S +
Sbjct: 191 VRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLELESDTSAS 241
>gi|357482059|ref|XP_003611315.1| Matrix metalloproteinase-28 [Medicago truncatula]
gi|355512650|gb|AES94273.1| Matrix metalloproteinase-28 [Medicago truncatula]
Length = 358
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 172/232 (74%), Gaps = 3/232 (1%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
I+ +P+ + + T+H + F GKPRW R PMTL+YAFS NMI+
Sbjct: 115 NTISTIVSPRCGVSDTAATHRIHTTQH---FAYFNGKPRWLRGSPMTLTYAFSPYNMIDT 171
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L +++I+ VF+RAF++WA VIPVSF T+ Y ADI+IGFYNGDHGDGEPFDGVLGVLAH
Sbjct: 172 LSLSEIQTVFERAFARWAKVIPVSFRLTEKYQSADIKIGFYNGDHGDGEPFDGVLGVLAH 231
Query: 142 SFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
+FSP++G+FHLDAAE WAVDF + S VAVDLESVA HEIGH+LGL HS +KEAVMYP L
Sbjct: 232 AFSPQNGRFHLDAAENWAVDFNHDDSRVAVDLESVATHEIGHVLGLGHSSIKEAVMYPNL 291
Query: 202 KPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMW 253
PR KKVDL +DD++GVQ+LYGSNPNFT SL++S+ S NLAV L W
Sbjct: 292 SPRRKKVDLKIDDVEGVQSLYGSNPNFTFSSLLQSENSFNLAVRLETGFYKW 343
>gi|356503315|ref|XP_003520456.1| PREDICTED: uncharacterized protein LOC100816597 [Glycine max]
Length = 544
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/193 (69%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K++V FPGKPRW+R +PMTL+YAFS+ENMI+ L +I F+RAF +WASVIPVSF+E
Sbjct: 148 KNFVFFPGKPRWSRSMPMTLTYAFSRENMIHSLSKKEIIEAFQRAFMRWASVIPVSFVEV 207
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV-DFGSEKSP 168
D++ DI+IGFYN +HGDGEPFDG LGVLAHSFSPE G+ HLDAAETWAV DF S S
Sbjct: 208 SDFELTDIKIGFYNAEHGDGEPFDGELGVLAHSFSPEIGRLHLDAAETWAVDDFRSTASE 267
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
VAVDLESVA HEIGHLLGL+HS +KEAVMYP+L+PRDK+ DL +DDI+GVQ+LYGSNPNF
Sbjct: 268 VAVDLESVATHEIGHLLGLSHSSLKEAVMYPSLRPRDKRADLNIDDIKGVQSLYGSNPNF 327
Query: 229 TIGSLVESDISTN 241
+ESD+S N
Sbjct: 328 RSEWSLESDMSAN 340
>gi|224074161|ref|XP_002304280.1| predicted protein [Populus trichocarpa]
gi|222841712|gb|EEE79259.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 166/212 (78%), Gaps = 2/212 (0%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
KK + F GKPRW R P+ L+YAFS+ NMI+Y+ I D + VFKRAFS+WA VIPVSF+E
Sbjct: 77 KKRFAYFYGKPRWMRQAPVILTYAFSQNNMIDYISIKDTRTVFKRAFSRWAQVIPVSFME 136
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
++Y ADIRIGFY+ DHGDG+PFDGVLGVLAH+FSPE+G+FHLDA+ETWA+D KS
Sbjct: 137 IEEYPSADIRIGFYHRDHGDGKPFDGVLGVLAHAFSPENGRFHLDASETWALDLEKIKSR 196
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
VAVDLESVA HEIGH+LGL HS VKEAVMYP+L PR KKVDL +DD+ GVQALYGSNPNF
Sbjct: 197 VAVDLESVATHEIGHVLGLAHSSVKEAVMYPSLSPRTKKVDLKIDDVDGVQALYGSNPNF 256
Query: 229 TIGSLVESDISTNLA-VDLR-IKSSMWATMML 258
SL+ SD S N + LR +SS W ++
Sbjct: 257 KFSSLLVSDNSFNKGIIGLRNSRSSKWTISLV 288
>gi|449524374|ref|XP_004169198.1| PREDICTED: metalloendoproteinase 1-like, partial [Cucumis sativus]
Length = 321
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/231 (55%), Positives = 172/231 (74%), Gaps = 3/231 (1%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMIN 80
+ IA +P+ + K++ +T H + Y F G+PRW R TL+YA S + I+
Sbjct: 67 ETIATIMSPRCGISDLTKFNNNGSTIHSTRRYAFFNGQPRWIR--ASTLTYALSPDYTID 124
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
YL ++I+ V +R+FS+W++VIP++F E+ DYD +DIRIGFY GDHGDGE FDGVLGVLA
Sbjct: 125 YLTPSEIRKVVRRSFSRWSAVIPLNFTESSDYDSSDIRIGFYRGDHGDGEAFDGVLGVLA 184
Query: 141 HSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
H+FSPE+G+ HLDAAE WAVDF EKS VAVDLESV HEIGH+LGL HS VKE+VMYP+
Sbjct: 185 HAFSPENGRLHLDAAERWAVDFEKEKSKVAVDLESVVTHEIGHVLGLAHSAVKESVMYPS 244
Query: 201 LKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSS 251
L PR KKVDL +DD++G+Q LYG+NPNF + S +ES+ S N + +R++++
Sbjct: 245 LSPRGKKVDLRIDDVEGIQVLYGTNPNFKLESFLESEKSMNKGIGVRLRAA 295
>gi|449469440|ref|XP_004152428.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 323
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 163/217 (75%), Gaps = 3/217 (1%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMIN 80
+ IA +P+ + K++ +T H + Y F G+PRW R TL+YA S + I+
Sbjct: 77 ETIATIMSPRCGISDLTKFNNNGSTIHSTRRYAFFNGQPRWIR--ASTLTYALSPDYTID 134
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
YL ++I+ V +R+FS+W++VIP++F E+ DYD +DIRIGFY GDHGDGE FDGVLGVLA
Sbjct: 135 YLTPSEIRKVVRRSFSRWSAVIPLNFTESSDYDSSDIRIGFYRGDHGDGEAFDGVLGVLA 194
Query: 141 HSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
H+FSPE+G+ HLDAAE WAVDF EKS VAVDLESV HEIGH+LGL HS VKE+VMYP+
Sbjct: 195 HAFSPENGRLHLDAAERWAVDFEKEKSKVAVDLESVVTHEIGHVLGLAHSAVKESVMYPS 254
Query: 201 LKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESD 237
L PR KKVDL +DD++G+Q LYG+NPNF + S +ES+
Sbjct: 255 LSPRGKKVDLRIDDVEGIQVLYGTNPNFKLESFLESE 291
>gi|359496856|ref|XP_003635357.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 184
Score = 266 bits (679), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 147/172 (85%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
+K+VF+R FS+WASVIPV+F ET+D+ ADI+IGFY+GDHGDGEPFDGVLGVLAH+FSP+
Sbjct: 1 MKSVFERGFSRWASVIPVNFTETEDFGSADIKIGFYSGDHGDGEPFDGVLGVLAHAFSPQ 60
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK 206
+G+FH D AETW VDF SEKS VA+DLESVA HEIGH+LGL HS VKEAVMYP+L PR K
Sbjct: 61 NGRFHFDRAETWTVDFESEKSRVAIDLESVATHEIGHILGLAHSSVKEAVMYPSLSPRRK 120
Query: 207 KVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMML 258
KVDL DD++GVQALYG NPNF SL+ESDIS+N AV L+I+ S WAT ++
Sbjct: 121 KVDLKRDDVEGVQALYGPNPNFKFSSLMESDISSNRAVGLQIRPSRWATTLV 172
>gi|414867700|tpg|DAA46257.1| TPA: hypothetical protein ZEAMMB73_433563 [Zea mays]
Length = 366
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 143/188 (76%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ F G+PRWT+ P+ L+YA S ++YL ++AVF+RAF++WA VIPV F+ET+D
Sbjct: 152 FTFFKGEPRWTQPDPLVLTYAISPTATVDYLPAGTVRAVFRRAFARWARVIPVGFVETED 211
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y+ ADIR+GFY G HGDG PFDG LGVL H+FSP++G+ HLDAAE WAVD +E AV
Sbjct: 212 YEAADIRVGFYVGSHGDGIPFDGPLGVLGHAFSPKNGRLHLDAAERWAVDMDTETVHSAV 271
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIG 231
DLESVA HEIGH+LGL HS +AVMYP+L PR+KK +L +DDI+GVQ LYGSNP F++
Sbjct: 272 DLESVATHEIGHVLGLGHSSSPKAVMYPSLSPREKKAELTVDDIEGVQWLYGSNPGFSLS 331
Query: 232 SLVESDIS 239
SL + D S
Sbjct: 332 SLYQQDSS 339
>gi|242035087|ref|XP_002464938.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
gi|241918792|gb|EER91936.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
Length = 371
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 151/225 (67%), Gaps = 5/225 (2%)
Query: 20 SPQCIAVRSTP-KFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENM 78
+P+C P + D A +R + F G+PRWT+ P+ LSYA S
Sbjct: 128 APRCGVGDDVPVSLSGSSTASRDGAAVSR----FTFFKGEPRWTQPDPLVLSYAISPTAT 183
Query: 79 INYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
++YL ++AVF+RAF++WA VIPV F+ETDDY ADIR+GFY G HGDG PFDG LGV
Sbjct: 184 VDYLPAETVRAVFRRAFARWARVIPVGFVETDDYQEADIRVGFYVGSHGDGIPFDGPLGV 243
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
L H+FSP++G+ HLDAAE WAVD +E AVDLESVA HEIGH+LGL HS +AVMY
Sbjct: 244 LGHAFSPKNGRLHLDAAERWAVDMDTETVHSAVDLESVATHEIGHVLGLGHSSSPKAVMY 303
Query: 199 PTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLA 243
P+L PR KK +L +DDI+GVQ LYG NP F++ SL + D S A
Sbjct: 304 PSLSPRQKKAELTVDDIEGVQWLYGPNPGFSLSSLYQQDSSMGSA 348
>gi|297610914|ref|NP_001065361.2| Os10g0557900 [Oryza sativa Japonica Group]
gi|14165321|gb|AAK55453.1|AC069300_8 putative metalloproteinase [Oryza sativa Japonica Group]
gi|31433475|gb|AAP54980.1| Matrixin family protein, expressed [Oryza sativa Japonica Group]
gi|255679626|dbj|BAF27198.2| Os10g0557900 [Oryza sativa Japonica Group]
Length = 355
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 52 YVLFPGKPRWTRH-VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+ F G+PRWTR P+ LSYA S + YL ++AVF+RAF++WA IPV F+ETD
Sbjct: 141 FTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPAAVRAVFQRAFARWARTIPVGFVETD 200
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVA 170
DY+ ADI++GFY G+HGDG PFDG LG+L H+FSP++G+ HLDA+E WAVDF + + A
Sbjct: 201 DYEAADIKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRLHLDASEHWAVDFDVDATASA 260
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
+DLESVA HEIGH+LGL HS AVMYP++KPR+KKV L +DD++GVQALYGSNP F++
Sbjct: 261 IDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEGVQALYGSNPQFSL 320
Query: 231 GSLVESDISTN 241
SL E S++
Sbjct: 321 SSLSEQGTSSS 331
>gi|125532922|gb|EAY79487.1| hypothetical protein OsI_34615 [Oryza sativa Indica Group]
gi|125575664|gb|EAZ16948.1| hypothetical protein OsJ_32430 [Oryza sativa Japonica Group]
Length = 337
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 145/191 (75%), Gaps = 1/191 (0%)
Query: 52 YVLFPGKPRWTRH-VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+ F G+PRWTR P+ LSYA S + YL ++AVF+RAF++WA IPV F+ETD
Sbjct: 123 FTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPAAVRAVFQRAFARWARTIPVGFVETD 182
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVA 170
DY+ ADI++GFY G+HGDG PFDG LG+L H+FSP++G+ HLDA+E WAVDF + + A
Sbjct: 183 DYEAADIKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRLHLDASEHWAVDFDVDATASA 242
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
+DLESVA HEIGH+LGL HS AVMYP++KPR+KKV L +DD++GVQALYGSNP F++
Sbjct: 243 IDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRLTVDDVEGVQALYGSNPQFSL 302
Query: 231 GSLVESDISTN 241
SL E S++
Sbjct: 303 SSLSEQGTSSS 313
>gi|326491397|dbj|BAJ94176.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 145/191 (75%), Gaps = 6/191 (3%)
Query: 52 YVLFPGKPRWTRHV-----PMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
+ F GKPRWTR P++L+YA S + YL D++AVF+RAF +WA VIPV+F
Sbjct: 151 FTFFKGKPRWTRRSDPDPDPVSLTYAVSPTATVGYLPADDVRAVFRRAFERWARVIPVAF 210
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE- 165
+ETDDYD ADI++GFY G HGDG PFDG LGVL H+FSP++G+ HLDAAE WA+DF E
Sbjct: 211 VETDDYDKADIKVGFYEGSHGDGVPFDGPLGVLGHAFSPKNGRLHLDAAERWALDFAGET 270
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
K+ A+DLESVA HEIGH+LGL HS +AVMYP++KP +KK DL +DD++GVQ LYGSN
Sbjct: 271 KASAAIDLESVATHEIGHVLGLGHSTSPQAVMYPSIKPLEKKADLTVDDVEGVQLLYGSN 330
Query: 226 PNFTIGSLVES 236
P+F + SL ++
Sbjct: 331 PDFRLSSLYDA 341
>gi|297804516|ref|XP_002870142.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
lyrata]
gi|297315978|gb|EFH46401.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 141/189 (74%), Gaps = 4/189 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F GKP+W R TL+YA SK + ++YL D+K VF+RAFS+W+SVIPVSF E DD
Sbjct: 149 YTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDD 205
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFG-SEKSPVA 170
+ AD++IGFY GDHGDG PFDGVLG LAH+F+PE+G+ HLDAAETW VD S VA
Sbjct: 206 FSAADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWVVDDDFKGSSEVA 265
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
VDLESVA HEIGHLLGL HS + AVMYP+L+PR KKVDL +DD+ GV LYG NP +
Sbjct: 266 VDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPNPKLRL 325
Query: 231 GSLVESDIS 239
SL +S+ S
Sbjct: 326 DSLTQSEDS 334
>gi|15235820|ref|NP_193397.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
gi|2245019|emb|CAB10439.1| proteinase like protein [Arabidopsis thaliana]
gi|7268414|emb|CAB78706.1| proteinase like protein [Arabidopsis thaliana]
gi|332658379|gb|AEE83779.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
Length = 364
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 142/189 (75%), Gaps = 4/189 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F GKP+W R TL+YA SK + ++YL D+K VF+RAFS+W+SVIPVSF E DD
Sbjct: 150 YTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDD 206
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE-KSPVA 170
+ AD++IGFY GDHGDG PFDGVLG LAH+F+PE+G+ HLDAAETW VD + S VA
Sbjct: 207 FTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVA 266
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
VDLESVA HEIGHLLGL HS + AVMYP+L+PR KKVDL +DD+ GV LYG NP +
Sbjct: 267 VDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPNPKLRL 326
Query: 231 GSLVESDIS 239
SL +S+ S
Sbjct: 327 DSLTQSEDS 335
>gi|28393482|gb|AAO42162.1| putative proteinase [Arabidopsis thaliana]
Length = 364
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 142/189 (75%), Gaps = 4/189 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F GKP+W R TL+YA SK + ++YL D+K VF+RAFS+W+SVIPVSF E DD
Sbjct: 150 YTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDD 206
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE-KSPVA 170
+ AD++IGFY GDHGDG PFDGVLG LAH+F+PE+G+ HLDAAETW VD + S VA
Sbjct: 207 FTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVA 266
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
VDLESVA HEIGHLLGL HS + AVMYP+L+PR KKVDL +DD+ GV LYG NP +
Sbjct: 267 VDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPNPKLRL 326
Query: 231 GSLVESDIS 239
SL +S+ S
Sbjct: 327 DSLTQSEDS 335
>gi|21553383|gb|AAM62476.1| proteinase like protein [Arabidopsis thaliana]
Length = 364
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 142/189 (75%), Gaps = 4/189 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F GKP+W R TL+YA SK + ++YL D+K VF+RAFS+W+SVIPVSF E DD
Sbjct: 150 YTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDD 206
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE-KSPVA 170
+ AD++IGFY GDHGDG PFDGVLG LAH+F+PE+G+ HLDAAETW VD + S VA
Sbjct: 207 FTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVA 266
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
VDLESVA HEIGHLLGL HS + AVMYP+L+PR KKVDL +DD+ GV LYG NP +
Sbjct: 267 VDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPNPKLRL 326
Query: 231 GSLVESDIS 239
SL +S+ S
Sbjct: 327 DSLTQSEDS 335
>gi|357147384|ref|XP_003574325.1| PREDICTED: metalloendoproteinase 1-like [Brachypodium distachyon]
Length = 380
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 139/190 (73%), Gaps = 8/190 (4%)
Query: 52 YVLFPGKPRWTR-------HVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
+ F G+PRW R + L+YA S + YL ++AV +RAF++WA VIPV
Sbjct: 155 FSFFKGQPRWARPQSESESDPAIVLTYAASPTATVGYLPPDAVRAVLQRAFTRWARVIPV 214
Query: 105 SFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
SF+ETDDYD ADI++GFY G HGDG PFDG LGVL H+FSP++G+ HLDA+E WAVDFG
Sbjct: 215 SFVETDDYDAADIKVGFYEGSHGDGVPFDGPLGVLGHAFSPKNGRLHLDASERWAVDFGG 274
Query: 165 E-KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
E ++ A+DLESV HEIGH+LGL HS +EAVMYP++KP +K DL +DD++GVQ LYG
Sbjct: 275 EMETSSAIDLESVVTHEIGHVLGLGHSTSQEAVMYPSIKPLQRKADLTIDDVEGVQLLYG 334
Query: 224 SNPNFTIGSL 233
SNP+F + SL
Sbjct: 335 SNPDFRLSSL 344
>gi|212378958|gb|ACJ24812.1| matrix metalloproteinase [Pinus taeda]
Length = 364
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 150/216 (69%), Gaps = 3/216 (1%)
Query: 33 KLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKEN-MINYLHITDIKAVF 91
+ + D + + A R + + FPG PRW LSYAFS ++ +++ + + ++ V
Sbjct: 129 RCGREDIINGSSAMRGRGLFPFFPGSPRWGPD-KRVLSYAFSPDHEVLSEISLAELSTVV 187
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFH 151
RAF +WA VIP++F E+ DY ADI++GFY+GDHGDG PFDG LG LAHSFSP G+FH
Sbjct: 188 GRAFKRWADVIPITFTESSDYSSADIKVGFYSGDHGDGHPFDGPLGTLAHSFSPPDGRFH 247
Query: 152 LDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA 211
LDAAE+W VD S+ + A+DLES+A HEIGHLLGL H+ K AVMYP++ PR +KVDL
Sbjct: 248 LDAAESWTVDLSSDSAATAIDLESIATHEIGHLLGLGHTTEKAAVMYPSIAPRTRKVDLV 307
Query: 212 LDDIQGVQALYGSNPNFTIGS-LVESDISTNLAVDL 246
LDD+ GVQ +YG+NPN+ + L +++ S+ A+ L
Sbjct: 308 LDDVDGVQYVYGANPNYNASAVLAQNETSSATAIQL 343
>gi|255558368|ref|XP_002520211.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
gi|223540703|gb|EEF42266.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
Length = 364
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/243 (48%), Positives = 148/243 (60%), Gaps = 8/243 (3%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
P+C S K+ + H Y FPG PRW L+YAF N +
Sbjct: 120 PRCGNADIINGSTTMNSGKWQTTTTSFHAVGHYSFFPGTPRWPDS-KRDLTYAFWPSNQL 178
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
+ K+VF RAF +W++VIP++F ET+ Y+ ADIRIGF++GDHGDGEPFDGVLG L
Sbjct: 179 TEVE----KSVFTRAFDRWSTVIPMNFTETESYNVADIRIGFFSGDHGDGEPFDGVLGTL 234
Query: 140 AHSFSPESGKFHLDAAETWAV--DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
AH+FSP SG+FHLD E W V D S AVDLESVAVHEIGHLLGL HS V+EA+M
Sbjct: 235 AHAFSPPSGRFHLDGEENWVVSGDISSSTISSAVDLESVAVHEIGHLLGLGHSSVEEAIM 294
Query: 198 YPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMM 257
YPT+ R +K++LA DDIQG+Q LYGSNPNF S I S+WA +
Sbjct: 295 YPTIPSRTRKIELANDDIQGIQYLYGSNPNFNGSSSSTPSIQERETSGAYHARSLWALGL 354
Query: 258 LHY 260
+ +
Sbjct: 355 IAF 357
>gi|224122140|ref|XP_002318762.1| predicted protein [Populus trichocarpa]
gi|222859435|gb|EEE96982.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 128/180 (71%), Gaps = 9/180 (5%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G PRW + L+YAF N + ++K VF RAF +W++VIP++F + D
Sbjct: 152 YSFFTGMPRWRKQA---LTYAFLPGNQL----TDEVKTVFSRAFDRWSTVIPLTFTQADS 204
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
+ ADI IGFY+GDHGDGEPFDGVLG LAHSFSP SG+FHLD E W V D +
Sbjct: 205 INAADIGIGFYSGDHGDGEPFDGVLGTLAHSFSPPSGQFHLDGDENWVVTGDVRTSSLTT 264
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLESVAVHEIGHLLGL HS V+E++MYPT+ R KKV+LA DDIQG+Q LYGSNPN+
Sbjct: 265 AVDLESVAVHEIGHLLGLGHSSVEESIMYPTISSRTKKVELADDDIQGIQVLYGSNPNYN 324
>gi|224136290|ref|XP_002322292.1| predicted protein [Populus trichocarpa]
gi|222869288|gb|EEF06419.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 136/187 (72%), Gaps = 10/187 (5%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G+PRW + L+Y FS EN ++ ++KAVF RAF +W++VIP++F +TD
Sbjct: 162 YSFFTGQPRWRKQA---LTYVFSPENQLS----DEVKAVFSRAFDRWSTVIPLNFSQTDS 214
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
ADIRI F++GDHGDGEPFDGVLG LAH+FSP++G+ HLD E W V D +
Sbjct: 215 IYTADIRIAFFSGDHGDGEPFDGVLGTLAHAFSPQNGRLHLDDDEHWVVTDDVRTSTLTS 274
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLESVAVHEIGHLLGL HS V+E++MYP++ R +KV+LA DDI+G+Q LYGSNPNF
Sbjct: 275 AVDLESVAVHEIGHLLGLGHSSVEESIMYPSISSRTRKVELATDDIEGIQTLYGSNPNFN 334
Query: 230 IGSLVES 236
GS +S
Sbjct: 335 -GSSAQS 340
>gi|356498040|ref|XP_003517862.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 379
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 133/193 (68%), Gaps = 10/193 (5%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G+PRW L+YAF +N ++ + IK VF AFS+W+ V +SF ET
Sbjct: 165 YSFFDGQPRWPVGT-QELTYAFDPDNALDDV----IKTVFGNAFSRWSEVTTISFRETAS 219
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV-- 169
Y ADIRIGFY GDHGDGEPFDGVLG LAH+FSP +G FHLD+AE W K+ +
Sbjct: 220 YVAADIRIGFYGGDHGDGEPFDGVLGTLAHAFSPTNGMFHLDSAEDWVASGDVTKASLSN 279
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLESVAVHEIGHLLGL HS V++A+MYPT+ R +KV+L DDIQG+Q LYGSNPNFT
Sbjct: 280 AVDLESVAVHEIGHLLGLGHSSVEDAIMYPTITARTRKVELNEDDIQGIQVLYGSNPNFT 339
Query: 230 ---IGSLVESDIS 239
S ESD S
Sbjct: 340 GTPATSSRESDTS 352
>gi|356524085|ref|XP_003530663.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 370
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 132/193 (68%), Gaps = 10/193 (5%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ LFPG PRW L+YAF N ++ +K VF AF++WA V + F ET
Sbjct: 158 FTLFPGMPRWPEGT-QELTYAFFPGNGLS----DAVKGVFAAAFARWAEVTSLKFRETAS 212
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKS--PV 169
Y ADIRIGF++GDHGDGEPFDG LG LAH+FSP +G+FHLDAAE W V +S P
Sbjct: 213 YFGADIRIGFFSGDHGDGEPFDGSLGTLAHAFSPTNGRFHLDAAEDWVVSGDVTRSALPT 272
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF- 228
AVDLESVAVHEIGHLLGL HS V+EAVM+PT+ R KKV LA DDI+G+Q LYGSNPNF
Sbjct: 273 AVDLESVAVHEIGHLLGLGHSSVEEAVMFPTISSRKKKVVLARDDIEGIQFLYGSNPNFN 332
Query: 229 --TIGSLVESDIS 239
T S E D S
Sbjct: 333 GSTATSAPERDAS 345
>gi|356501971|ref|XP_003519796.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 379
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 127/180 (70%), Gaps = 7/180 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G+PRW L+YAF +N ++ + K VF AFS+W+ V +SF ET
Sbjct: 164 YSFFDGQPRWPEGT-QELTYAFDPDNALDDVS----KTVFGNAFSRWSEVTTISFRETSS 218
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV-- 169
Y ADIRIGFY GDHGDGEPFDGVLG LAH+FSP +G+FHLD+AE W K+ +
Sbjct: 219 YAAADIRIGFYGGDHGDGEPFDGVLGTLAHAFSPTNGRFHLDSAEDWVASGDVTKASLSN 278
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLESVAVHEIGHLLGL HS V++A+MYPT+ R +KV+L DDI G+Q LYGSNPNFT
Sbjct: 279 AVDLESVAVHEIGHLLGLGHSSVEDAIMYPTITARTRKVELNEDDILGIQVLYGSNPNFT 338
>gi|357516677|ref|XP_003628627.1| Matrix metalloproteinase-9 [Medicago truncatula]
gi|355522649|gb|AET03103.1| Matrix metalloproteinase-9 [Medicago truncatula]
Length = 373
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 140/212 (66%), Gaps = 8/212 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ +FPG+PRW L+YAF N + +K+VF AF++W+ V + F ET
Sbjct: 158 FTVFPGQPRWPEG-KQELTYAFFPGNELT----ETVKSVFATAFARWSEVTTLKFTETTL 212
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKS--PV 169
Y ADI+IGF+NGDHGDGEPFDG LG LAH+FSP +G+FHLDAAE W V KS P
Sbjct: 213 YSGADIKIGFFNGDHGDGEPFDGSLGTLAHAFSPRNGRFHLDAAEDWVVSGDVSKSSLPT 272
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLESVAVHEIGHLLGL HS +EA+M+PT+ R KKV LA DD++G+Q LYG+NP+F
Sbjct: 273 AVDLESVAVHEIGHLLGLGHSSEEEAIMFPTISSRMKKVVLADDDVRGIQYLYGTNPSFN 332
Query: 230 IGSLVESDISTNLAVDLRIKSSMWATMMLHYL 261
GS V S N+ +S+W+ L L
Sbjct: 333 -GSTVISSPERNIGNGGCSLTSLWSPWRLFSL 363
>gi|297838805|ref|XP_002887284.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
lyrata]
gi|297333125|gb|EFH63543.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 131/182 (71%), Gaps = 8/182 (4%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y LFPG+PRW R+ L+YAF +N + ++K+VF RAF +W+ V ++F +
Sbjct: 153 KRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNFTLS 207
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKS 167
D + +DI IGFY GDHGDGEPFDGVLG LAH+FSP SGKFHLDA E W V D S S
Sbjct: 208 DSFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLS 267
Query: 168 -PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
AVDLESVAVHEIGHLLGL HS V+E++MYPT+ +KVDL DD++G+Q LYG+NP
Sbjct: 268 VTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANP 327
Query: 227 NF 228
NF
Sbjct: 328 NF 329
>gi|225424789|ref|XP_002267298.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 364
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 139/229 (60%), Gaps = 12/229 (5%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKK--DYVLFPGKPRWTRHVPMTLSYAFSKEN 77
SP+C S K P+ + Y F GKP W L+Y F +N
Sbjct: 116 SPRCGNADIENGSSSMNSGKSTPSTSGHFHTVGHYSFFDGKPVWPES-KRNLTYGFLPDN 174
Query: 78 MINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLG 137
++ +KAVF AF +WA+V P++F E+D Y AD+RI FY GDHGDGE FDGVLG
Sbjct: 175 QLS----DTVKAVFTSAFERWAAVTPLTFTESDSYYSADLRIAFYTGDHGDGEAFDGVLG 230
Query: 138 VLAHSFSPESGKFHLDAAETWAV--DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
LAH+FSP +G+FHLD E W D + A+DLESVAVHEIGHLLGL HS V+EA
Sbjct: 231 TLAHAFSPTNGRFHLDGEENWVATGDVTTSSISSAIDLESVAVHEIGHLLGLGHSSVEEA 290
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLV---ESDISTN 241
+MYPT+ R KKV+LA DDIQG+Q LYGSNPN+ S ES+ + N
Sbjct: 291 IMYPTITSRTKKVELASDDIQGIQELYGSNPNYNGSSTSPSQESETTNN 339
>gi|147773983|emb|CAN76268.1| hypothetical protein VITISV_004096 [Vitis vinifera]
Length = 364
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 136/224 (60%), Gaps = 9/224 (4%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKK--DYVLFPGKPRWTRHVPMTLSYAFSKEN 77
SP+C S K P+ + Y F GKP W L+Y F +N
Sbjct: 116 SPRCGNADIENGSSSMNSGKSTPSTSGHFHTVGHYSFFDGKPVWPES-KRNLTYGFLPDN 174
Query: 78 MINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLG 137
++ +KAVF AF +WA+V P++F E+D Y AD+RI FY GDHGDGE FDGVLG
Sbjct: 175 QLS----DTVKAVFTSAFERWAAVTPLTFTESDSYYSADLRIAFYTGDHGDGEAFDGVLG 230
Query: 138 VLAHSFSPESGKFHLDAAETWAV--DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
LAH+FSP +G+FHLD E W D + A+DLESVAVHEIGHLLGL HS V+EA
Sbjct: 231 TLAHAFSPTNGRFHLDGEENWVATGDVTTSSISSAIDLESVAVHEIGHLLGLGHSSVEEA 290
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDIS 239
+MYPT+ R KKV+LA DDIQG+Q LYGSNPN+ S S S
Sbjct: 291 IMYPTITSRTKKVELASDDIQGIQELYGSNPNYNGSSTSPSQES 334
>gi|356570090|ref|XP_003553224.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 486
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ LFPG PRW L+YAF N ++ +K VF AF++WA V + F E+
Sbjct: 221 FSLFPGMPRWPEGT-QELTYAFFPGNELS----DTVKGVFATAFARWAEVTSLKFRESAS 275
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
Y ADIRIGF++GDHGDGEPFDG LG LAH+FSP +G+FHLDAAE W V D P
Sbjct: 276 YFGADIRIGFFSGDHGDGEPFDGSLGTLAHAFSPTNGRFHLDAAEDWVVSGDVTLSALPT 335
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
AVDLESVAVHEIGHLLGL HS V+EAVM+PT+ R KKV LA DDI+G+Q LYGSNPNF
Sbjct: 336 AVDLESVAVHEIGHLLGLGHSSVEEAVMFPTISSRKKKVVLARDDIEGIQFLYGSNPNF 394
>gi|110741618|dbj|BAE98757.1| predicted GPI-anchored protein [Arabidopsis thaliana]
Length = 378
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 131/182 (71%), Gaps = 8/182 (4%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y LFPG+PRW R+ L+YAF +N + ++K+VF RAF +W+ V ++F +
Sbjct: 153 KRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNFTLS 207
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKS 167
+ + +DI IGFY GDHGDGEPFDGVLG LAH+FSP SGKFHLDA E W V D S S
Sbjct: 208 ESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLS 267
Query: 168 -PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
AVDLESVAVHEIGHLLGL HS V+E++MYPT+ +KVDL DD++G+Q LYG+NP
Sbjct: 268 VTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANP 327
Query: 227 NF 228
NF
Sbjct: 328 NF 329
>gi|15223067|ref|NP_177174.1| matrix metalloproteinase [Arabidopsis thaliana]
gi|2194124|gb|AAB61099.1| Similar to Glycine metalloendoproteinase (gb|U63725) [Arabidopsis
thaliana]
gi|332196906|gb|AEE35027.1| matrix metalloproteinase [Arabidopsis thaliana]
Length = 378
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 131/182 (71%), Gaps = 8/182 (4%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y LFPG+PRW R+ L+YAF +N + ++K+VF RAF +W+ V ++F +
Sbjct: 153 KRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNFTLS 207
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKS 167
+ + +DI IGFY GDHGDGEPFDGVLG LAH+FSP SGKFHLDA E W V D S S
Sbjct: 208 ESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLS 267
Query: 168 -PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
AVDLESVAVHEIGHLLGL HS V+E++MYPT+ +KVDL DD++G+Q LYG+NP
Sbjct: 268 VTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANP 327
Query: 227 NF 228
NF
Sbjct: 328 NF 329
>gi|357486257|ref|XP_003613416.1| Matrix metalloproteinase-9 [Medicago truncatula]
gi|355514751|gb|AES96374.1| Matrix metalloproteinase-9 [Medicago truncatula]
Length = 393
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 135/213 (63%), Gaps = 10/213 (4%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFS-KENM 78
P+C S K++ + H Y FPG+PRW TL+YAF EN+
Sbjct: 126 PRCGVADIINGTTSMNSGKFNSSSTNFHTVAHYSFFPGQPRWPEGT-QTLTYAFDPSENL 184
Query: 79 INYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
+ K VF AF++W+ V ++F E Y +DI+IGFY+GDHGDGE FDGVLG
Sbjct: 185 DDA-----TKQVFANAFNQWSKVTTITFTEATSYSSSDIKIGFYSGDHGDGEAFDGVLGT 239
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPV--AVDLESVAVHEIGHLLGLTHSPVKEAV 196
LAH+FSP G+ HLD AE W V+ +S + AVDLESV VHEIGHLLGL HS ++EA+
Sbjct: 240 LAHAFSPTDGRLHLDKAEDWVVNGDVTESSLSNAVDLESVVVHEIGHLLGLGHSSIEEAI 299
Query: 197 MYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
MYPT+ R KKV+L DDI+G+Q LYGSNPNFT
Sbjct: 300 MYPTISSRTKKVELESDDIEGIQMLYGSNPNFT 332
>gi|302813804|ref|XP_002988587.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
gi|300143694|gb|EFJ10383.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
Length = 361
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 139/242 (57%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
+P+C + P + + K Y FPG PRW +T ++ S ++
Sbjct: 115 TPRCGGIDVDPSGVSQMLQNLTHPGTSHFVKHYSFFPGTPRWVSKRSLTYAFDQSTTSLA 174
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
+ + +T ++ F R F +WA+++P++F ET ADI I F DHGD PFDG +GVL
Sbjct: 175 SGIPLTSLRTAFSRGFQRWANIVPLTFTETSSISSADIVIAFAGFDHGDRHPFDGQMGVL 234
Query: 140 AHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
AH+F+PE G+FHLD++E+W+V+ S S A+DLESV HEIGHL+GL HS A+M+P
Sbjct: 235 AHAFAPEDGRFHLDSSESWSVNVRSATSLAAIDLESVVTHEIGHLIGLGHSGDSAAIMFP 294
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMMLH 259
++ PR K DDI G QALYG+NPNF GS +D + + + S W ++L
Sbjct: 295 SIAPRQIKTAFGQDDIDGAQALYGANPNFVPGSTAGTDSNVQSSSSWKATFSCWHLLVLL 354
Query: 260 YL 261
L
Sbjct: 355 VL 356
>gi|302794749|ref|XP_002979138.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
gi|300152906|gb|EFJ19546.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
Length = 361
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 138/242 (57%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
+P+C + P + + K Y FPG PRW +T ++ S ++
Sbjct: 115 TPRCGGIDVDPSGVSQMLQNLTHPGTSHFVKHYSFFPGTPRWVSKRSLTYAFDQSTTSLA 174
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
+ + + ++ F R F +WA+++P++F ET ADI I F DHGD PFDG +GVL
Sbjct: 175 SGIPLNSLRTAFSRGFQRWANIVPLTFTETSSISSADIVIAFAGFDHGDRHPFDGQMGVL 234
Query: 140 AHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
AH+F+PE G+FHLD++E+W+V+ S S A+DLESV HEIGHL+GL HS A+M+P
Sbjct: 235 AHAFAPEDGRFHLDSSESWSVNVRSATSLAAIDLESVVTHEIGHLIGLGHSGDSAAIMFP 294
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMMLH 259
++ PR K DDI G QALYG+NPNF GS +D + + + S W ++L
Sbjct: 295 SIAPRQIKTAFGQDDIDGAQALYGANPNFVPGSTTGTDSNVQSSSSWKATFSCWHLLVLL 354
Query: 260 YL 261
L
Sbjct: 355 VL 356
>gi|395627593|emb|CCH68442.1| matrix metalloproteinase precursor [Solanum lycopersicum]
Length = 367
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 133/220 (60%), Gaps = 20/220 (9%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
P+C S K T H Y FPG PRW + L+YAF+ +N +
Sbjct: 118 PRCGNADVVNGTSTMNSGKPPAGSPTMHTVAHYSFFPGSPRWPANK-RDLTYAFAPQNGL 176
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
DIK VF RAF +W+ V P++F E Y ADI+IGF++GDH DGEPFDG +G L
Sbjct: 177 ----TDDIKIVFTRAFDRWSEVTPLTFTEIASYQSADIKIGFFSGDHNDGEPFDGPMGTL 232
Query: 140 AHSFSPESGKFHLDAAETWAVDFGSEKSPV----------AVDLESVAVHEIGHLLGLTH 189
AH+FSP +G FHLD E W +D +P+ AVDLESVAVHEIGHLLGL H
Sbjct: 233 AHAFSPPAGHFHLDGEENWVID----GAPIVDGNFFSILSAVDLESVAVHEIGHLLGLGH 288
Query: 190 SPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
S V++A+MYPTL ++V+L DDI GVQ LYGSNPN+T
Sbjct: 289 SSVEDAIMYPTLGAGTRRVELRNDDILGVQELYGSNPNYT 328
>gi|171921109|gb|ACB59207.1| matrixin family protein [Brassica oleracea]
Length = 383
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 128/186 (68%), Gaps = 13/186 (6%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y FPG+PRW L+YAF +N + ++K+VF RAF +WA VIP++F
Sbjct: 158 KRYSFFPGEPRWPERR-RNLTYAFEPQNNL----AEEVKSVFSRAFVRWAEVIPLTFRRV 212
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVD------FG 163
+ + +DI IGFY G+HGD EPFDG +G LAH+FSP +G FHLD AE W V F
Sbjct: 213 ESFSTSDISIGFYTGEHGDREPFDGFMGTLAHAFSPPTGHFHLDGAENWIVSGEGGDGFL 272
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+E++ AVDLESVAVHEIGHLLGL HS V++++M+PT+ +KVDL DD++GVQ LYG
Sbjct: 273 TERA--AVDLESVAVHEIGHLLGLGHSSVQDSIMFPTISTGRRKVDLHSDDVEGVQYLYG 330
Query: 224 SNPNFT 229
SNPNF
Sbjct: 331 SNPNFN 336
>gi|98647786|gb|ABF58910.1| matrix metalloprotease 1 [Nicotiana tabacum]
Length = 365
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 137/218 (62%), Gaps = 15/218 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPG+PRW L+YAF +N + +IK+VF RAF +W+ V P+SF ET
Sbjct: 148 FSFFPGRPRWPDS-KTDLTYAFLPQNGL----TDNIKSVFSRAFDRWSEVTPLSFTETAS 202
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVD--------FG 163
+ ADI+IGF+ GDH DGEPFDG +G LAH+FSP G FHLD E W +D F
Sbjct: 203 FQSADIKIGFFAGDHNDGEPFDGPMGTLAHAFSPPGGHFHLDGDENWVIDGVPIVEGNFF 262
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
S S AVDLESVAVHEIGHLLGL HS V++++M+P+L ++V+LA DDIQGVQ LYG
Sbjct: 263 SILS--AVDLESVAVHEIGHLLGLGHSSVEDSIMFPSLAAGTRRVELANDDIQGVQVLYG 320
Query: 224 SNPNFTIGSLVESDISTNLAVDLRIKSSMWATMMLHYL 261
SNPNFT + V + N S+W ++ +
Sbjct: 321 SNPNFTGPNTVLNPTQENDTNGAPKFGSLWVHVVFAFF 358
>gi|110289556|gb|ABG66249.1| Matrixin family protein, expressed [Oryza sativa Japonica Group]
Length = 906
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 125/185 (67%), Gaps = 7/185 (3%)
Query: 52 YVLFPGKPRWTRH-VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
Y + GKPRWTRH PM L+YA S + + YL + AVF+ AF++WA VIPVSF E
Sbjct: 48 YAFWTGKPRWTRHGRPMVLTYAVSHTDAVGYLPGDAVLAVFRSAFARWAEVIPVSFAEIT 107
Query: 111 DYDFAD-----IRIGFYN-GDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
D A IR+GFY G+HGDG PFDG L V AH+ PE G+ DAAE WAVD +
Sbjct: 108 TEDDAAAAEADIRVGFYGAGEHGDGHPFDGPLNVYAHATGPEDGRIDFDAAERWAVDLAA 167
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ SP AVDLE+VA HEIGH LGL HS + +VMYP + R++KV L +DD++G+Q LYG
Sbjct: 168 DASPAAVDLETVATHEIGHALGLDHSTSESSVMYPYVGTRERKVRLTVDDVEGIQELYGV 227
Query: 225 NPNFT 229
NP+F+
Sbjct: 228 NPSFS 232
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 20/207 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPGKPRWTR L+YA S ++L + ++A + AF++WA VIP+ F+E +
Sbjct: 303 FTFFPGKPRWTR-PDRVLTYAVSPTATADHLPPSAVRAALRSAFARWADVIPMRFLEAER 361
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVL---------------GVLAHSFSPE-SGKFHLDAA 155
YD ADI++GFY + DG DG GVLAHS PE SG+ HL AA
Sbjct: 362 YDAADIKVGFYL--YTDGR-CDGCACIDSDDDDDDGDDCEGVLAHSSMPEKSGQIHLHAA 418
Query: 156 ETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDI 215
W V+ ++ +P+AVDLESVA HEIGH+LGL HS + ++MYP + R++KV L DD+
Sbjct: 419 HRWTVNLAADTAPLAVDLESVAAHEIGHVLGLDHSSSRSSMMYPFISCRERKVRLTTDDV 478
Query: 216 QGVQALYGSNPNFTIGSLVESDISTNL 242
G+Q LYG+NP+F+ G+ + DI + +
Sbjct: 479 HGIQELYGANPHFSFGAYFKQDILSRI 505
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 100/180 (55%), Gaps = 14/180 (7%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+PRW R M L+YA S ++L ++ F+ A ++WA V P+ F E Y+ AD
Sbjct: 675 GRPRWNR-PDMRLTYAVSPLATADHLPRDAVREAFRSALARWAEVTPLRFAEAARYEEAD 733
Query: 117 IRIGFY------NGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV----DFGSEK 166
IR+GFY D G LAH+ P+ G+ HL AA WAV G +
Sbjct: 734 IRVGFYLHTADGKCDACGCVCKGGGEEALAHAHPPQDGRIHLHAARKWAVTNVAGAGGDA 793
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
P+AVDLESVAVHEIGH LGL HS + ++MY + KV L DD++GVQ LYG+ P
Sbjct: 794 PPLAVDLESVAVHEIGHALGLGHSSSESSMMYRHYR---GKVSLTDDDVKGVQELYGAKP 850
>gi|289976573|gb|ADD21635.1| matrix metalloprotease 1 [Nicotiana benthamiana]
Length = 364
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 137/220 (62%), Gaps = 19/220 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPG+PRW L+YAF +N + +IK+VF RAF +W+ V P++F E
Sbjct: 147 FSFFPGRPRWPES-NRDLTYAFLPQNGL----TDNIKSVFSRAFDRWSEVTPLTFTEIAS 201
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV-- 169
+ ADI+IGF+ GDH DGEPFDG +G LAH+FSP G FHLD E W +D +P+
Sbjct: 202 FQSADIKIGFFAGDHNDGEPFDGPMGTLAHAFSPPGGHFHLDGDENWVID----GAPIVE 257
Query: 170 --------AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
AVDLESVAVHEIGHLLGL HS V++++M+P+L ++V+LA DDIQGVQ L
Sbjct: 258 GNFFSILSAVDLESVAVHEIGHLLGLGHSSVEDSIMFPSLAAGTRRVELANDDIQGVQVL 317
Query: 222 YGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATMMLHYL 261
YGSNPNFT + V + N S+W +++ +
Sbjct: 318 YGSNPNFTGPNTVLTPTHENDTNGALKFGSLWVHVVVAFF 357
>gi|297850892|ref|XP_002893327.1| hypothetical protein ARALYDRAFT_889959 [Arabidopsis lyrata subsp.
lyrata]
gi|297339169|gb|EFH69586.1| hypothetical protein ARALYDRAFT_889959 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 9/184 (4%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y FPG+PRW R+ L+YAF N + ++K+VF RAF++WA V P++F
Sbjct: 157 KHYSFFPGEPRWPRNR-RDLTYAFDPRNSL----TEEVKSVFSRAFARWAEVTPLTFTRV 211
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
+ + +DI IGFY+G+HGDGEPFDG + LAH+FSP +G FHLD E W V +
Sbjct: 212 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 271
Query: 170 ----AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
AVDLESVAVHEIGHLLGL HS V+ ++MYPT++ +KVDL DD++GVQ LYG N
Sbjct: 272 SVDEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGGN 331
Query: 226 PNFT 229
PNF
Sbjct: 332 PNFN 335
>gi|30688744|ref|NP_173824.2| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
gi|53749140|gb|AAU90055.1| At1g24140 [Arabidopsis thaliana]
gi|332192361|gb|AEE30482.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
Length = 384
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 9/184 (4%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y FPG+PRW R+ L+YAF N + ++K+VF RAF++W V P++F
Sbjct: 157 KHYSFFPGEPRWPRNR-RDLTYAFDPRNAL----TEEVKSVFSRAFTRWEEVTPLTFTRV 211
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDF----GSE 165
+ + +DI IGFY+G+HGDGEPFDG + LAH+FSP +G FHLD E W V G
Sbjct: 212 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 271
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
AVDLESVAVHEIGHLLGL HS V+ ++MYPT++ +KVDL DD++GVQ LYG+N
Sbjct: 272 SVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGAN 331
Query: 226 PNFT 229
PNF
Sbjct: 332 PNFN 335
>gi|2829864|gb|AAC00572.1| similar to zinc metalloproteinases [Arabidopsis thaliana]
Length = 377
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 9/184 (4%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y FPG+PRW R+ L+YAF N + ++K+VF RAF++W V P++F
Sbjct: 150 KHYSFFPGEPRWPRNR-RDLTYAFDPRNAL----TEEVKSVFSRAFTRWEEVTPLTFTRV 204
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDF----GSE 165
+ + +DI IGFY+G+HGDGEPFDG + LAH+FSP +G FHLD E W V G
Sbjct: 205 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 264
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
AVDLESVAVHEIGHLLGL HS V+ ++MYPT++ +KVDL DD++GVQ LYG+N
Sbjct: 265 SVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGAN 324
Query: 226 PNFT 229
PNF
Sbjct: 325 PNFN 328
>gi|395759049|emb|CCH68443.1| matrix metalloproteinase precursor [Solanum lycopersicum]
Length = 363
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 136/216 (62%), Gaps = 26/216 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG+P+W L+YAF N + DIK+VF RAF +W+ V P+SF E
Sbjct: 145 YSFFPGRPKWPEG-KTDLTYAFLPANNLT----DDIKSVFSRAFDRWSEVTPLSFTEIPS 199
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV-- 169
+ ADI+IGF GDH DGEPFDG +G LAH+FSP +G FHLD E W VD PV
Sbjct: 200 FQSADIKIGFLTGDHNDGEPFDGPMGTLAHAFSPPAGHFHLDGEENWVVD----GVPVNE 255
Query: 170 --------AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
AVDLESVAVHEIGHLLGL HS V++++MYP+L+ ++V+L DDI+GVQ L
Sbjct: 256 GNFFSILSAVDLESVAVHEIGHLLGLGHSSVEDSIMYPSLESGIRRVELVEDDIKGVQEL 315
Query: 222 YGSNPNFTIGSLVES----DISTNLAVDLRIKSSMW 253
YGSNPN+T + + D TN A I+SS+W
Sbjct: 316 YGSNPNYTGTNTTLTPSGLDNDTNGA---PIRSSVW 348
>gi|449452078|ref|XP_004143787.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
gi|449486509|ref|XP_004157318.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 366
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 130/177 (73%), Gaps = 6/177 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG+P W H L+YAF+ EN ++ ++KAVF RAF++WA+V P++F +
Sbjct: 148 YSFFPGRPIWPAHR-RDLTYAFAPENPLS----NEVKAVFARAFARWAAVTPLTFSAVES 202
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV-A 170
+ ADIRIGFY GDHGDGEPFDGVLG LAH+FSP SG FHLD E+W V +P+ A
Sbjct: 203 FRSADIRIGFYAGDHGDGEPFDGVLGTLAHAFSPPSGHFHLDGDESWVVSGDLRSAPLAA 262
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+DLESVAVHEIGHLLGL HS V+E++M+PT+ R +KVDLA DDI G+Q LYG NPN
Sbjct: 263 IDLESVAVHEIGHLLGLGHSSVEESIMFPTITSRTRKVDLAADDINGIQELYGGNPN 319
>gi|326533208|dbj|BAJ93576.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 357
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 126/184 (68%), Gaps = 3/184 (1%)
Query: 57 GKPRWTR---HVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYD 113
G+PRW R H +T + + L ++ F+ AF++WA VIP F ET DY+
Sbjct: 143 GQPRWARAPGHFLLTYAVLSTPPYQPLPLPRKAVRGAFRAAFARWARVIPARFRETRDYN 202
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDL 173
AD+R+GF GDHGDGEPFDG LGVL H+FSP SG+ HLDAAE WAV AVDL
Sbjct: 203 TADVRVGFLAGDHGDGEPFDGPLGVLGHAFSPPSGQLHLDAAERWAVGDLDAAGAGAVDL 262
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSL 233
ESVA HEIGH+LGL HS +AVMYP+LKPR +K +L LDD++GVQALYGSNP F++ SL
Sbjct: 263 ESVATHEIGHVLGLAHSSAPDAVMYPSLKPRTRKAELTLDDVRGVQALYGSNPRFSLSSL 322
Query: 234 VESD 237
E D
Sbjct: 323 SEPD 326
>gi|326492816|dbj|BAJ90264.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 126/184 (68%), Gaps = 3/184 (1%)
Query: 57 GKPRWTR---HVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYD 113
G+PRW R H +T + + L ++ F+ AF++WA VIP F ET DY+
Sbjct: 142 GQPRWARAPGHFLLTYAVLSTPPYQPLPLPRKAVRGAFRAAFARWARVIPARFRETRDYN 201
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDL 173
AD+R+GF GDHGDGEPFDG LGVL H+FSP SG+ HLDAAE WAV AVDL
Sbjct: 202 TADVRVGFLAGDHGDGEPFDGPLGVLGHAFSPPSGQLHLDAAERWAVGDLDAAGAGAVDL 261
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSL 233
ESVA HEIGH+LGL HS +AVMYP+LKPR +K +L LDD++GVQALYGSNP F++ SL
Sbjct: 262 ESVATHEIGHVLGLAHSSAPDAVMYPSLKPRTRKAELTLDDVRGVQALYGSNPRFSLSSL 321
Query: 234 VESD 237
E D
Sbjct: 322 SEPD 325
>gi|226502831|ref|NP_001142095.1| hypothetical protein precursor [Zea mays]
gi|194707100|gb|ACF87634.1| unknown [Zea mays]
gi|413952543|gb|AFW85192.1| hypothetical protein ZEAMMB73_264759 [Zea mays]
Length = 370
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 121/184 (65%), Gaps = 4/184 (2%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R + + FPG P W R +L+YA ++ ++ + T + V RAF++W++ ++F
Sbjct: 150 RGRNLFTYFPGSPSWPRSR-KSLTYAVTQTSLTSIDRAT-LSQVLARAFARWSAATTLTF 207
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETW--AVDFGS 164
ET ADI IGFY GDHGDGE FDG LG LAH+FSP G+FHLDAAE W + D
Sbjct: 208 TETASERDADITIGFYAGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWDASGDVAR 267
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
S VAVDLESVAVHEIGHLLGL HS A+M+PT+ R KVDLA DD+ G+Q LYG
Sbjct: 268 AASDVAVDLESVAVHEIGHLLGLGHSAEPAAIMFPTITSRTSKVDLAQDDVAGIQNLYGG 327
Query: 225 NPNF 228
NPNF
Sbjct: 328 NPNF 331
>gi|14165332|gb|AAK55464.1|AC069300_19 putative metalloproteinase [Oryza sativa Japonica Group]
gi|125532925|gb|EAY79490.1| hypothetical protein OsI_34618 [Oryza sativa Indica Group]
Length = 261
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 125/185 (67%), Gaps = 7/185 (3%)
Query: 52 YVLFPGKPRWTRH-VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
Y + GKPRWTRH PM L+YA S + + YL + AVF+ AF++WA VIPVSF E
Sbjct: 48 YAFWTGKPRWTRHGRPMVLTYAVSHTDAVGYLPGDAVLAVFRSAFARWAEVIPVSFAEIT 107
Query: 111 DYDFAD-----IRIGFYN-GDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
D A IR+GFY G+HGDG PFDG L V AH+ PE G+ DAAE WAVD +
Sbjct: 108 TEDDAAAAEADIRVGFYGAGEHGDGHPFDGPLNVYAHATGPEDGRIDFDAAERWAVDLAA 167
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ SP AVDLE+VA HEIGH LGL HS + +VMYP + R++KV L +DD++G+Q LYG
Sbjct: 168 DASPAAVDLETVATHEIGHALGLDHSTSESSVMYPYVGTRERKVRLTVDDVEGIQELYGV 227
Query: 225 NPNFT 229
NP+F+
Sbjct: 228 NPSFS 232
>gi|326497859|dbj|BAJ94792.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518943|dbj|BAJ92632.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528353|dbj|BAJ93358.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 369
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 119/187 (63%), Gaps = 3/187 (1%)
Query: 43 AEATRHKKD-YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
A A H + Y FPG P W L YA + + T + AVF RAF++W+
Sbjct: 141 ASAAGHGRHLYTYFPGGPMWPPFR-RELRYAITATAATSIDRAT-LGAVFARAFARWSDA 198
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
+ F E ADI IGFY G HGDGE FDG LG LAH+FSP G+FHLDAAE W D
Sbjct: 199 TTLRFAEAASESDADITIGFYAGSHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWVAD 258
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
+P AVDLESVAVHEIGHLLGL HS V+ A+MYPT++ +KVDL DD+QG+Q+L
Sbjct: 259 GQGGDAPGAVDLESVAVHEIGHLLGLGHSSVQGAIMYPTIRTGTRKVDLESDDVQGIQSL 318
Query: 222 YGSNPNF 228
YG+NPNF
Sbjct: 319 YGTNPNF 325
>gi|125541078|gb|EAY87473.1| hypothetical protein OsI_08881 [Oryza sativa Indica Group]
Length = 372
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 124/194 (63%), Gaps = 5/194 (2%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
D+ A A R + Y FPG P W L YA + + + T + AVF RAFS+
Sbjct: 137 DRNSSAAALRGRHLYSYFPGGPMWP-PFRRNLRYAITATSATSIDRAT-LSAVFARAFSR 194
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAET 157
WA+ + F E ADI IGFY+GDHGDGE FDG LG LAH+FSP G+FHLDAAE
Sbjct: 195 WAAATRLQFTEVSSASNADITIGFYSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEA 254
Query: 158 WAV--DFGSEKS-PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
W D + S AVDLESVAVHEIGHLLGL HS V +++MYPT++ +KVDL DD
Sbjct: 255 WVASGDVSTSSSFGTAVDLESVAVHEIGHLLGLGHSSVPDSIMYPTIRTGTRKVDLESDD 314
Query: 215 IQGVQALYGSNPNF 228
+ G+Q+LYG+NPNF
Sbjct: 315 VLGIQSLYGTNPNF 328
>gi|115448591|ref|NP_001048075.1| Os02g0740700 [Oryza sativa Japonica Group]
gi|46390313|dbj|BAD15762.1| putative zinc metalloproteinase [Oryza sativa Japonica Group]
gi|113537606|dbj|BAF09989.1| Os02g0740700 [Oryza sativa Japonica Group]
Length = 372
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 124/194 (63%), Gaps = 5/194 (2%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
D+ A A R + Y FPG P W L YA + + + T + AVF RAFS+
Sbjct: 137 DRNSSAAALRGRHLYSYFPGGPMWP-PFRRNLRYAITATSATSIDRAT-LSAVFARAFSR 194
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAET 157
WA+ + F E ADI IGFY+GDHGDGE FDG LG LAH+FSP G+FHLDAAE
Sbjct: 195 WAAATRLQFTEVSSASNADITIGFYSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEA 254
Query: 158 WAV--DFGSEKS-PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
W D + S AVDLESVAVHEIGHLLGL HS V +++MYPT++ +KVDL DD
Sbjct: 255 WVASGDVSTSSSFGTAVDLESVAVHEIGHLLGLGHSSVPDSIMYPTIRTGTRKVDLESDD 314
Query: 215 IQGVQALYGSNPNF 228
+ G+Q+LYG+NPNF
Sbjct: 315 VLGIQSLYGTNPNF 328
>gi|125583634|gb|EAZ24565.1| hypothetical protein OsJ_08327 [Oryza sativa Japonica Group]
Length = 372
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 124/194 (63%), Gaps = 5/194 (2%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
D+ + A R + Y FPG P W L YA + + + T + AVF RAFS+
Sbjct: 137 DRNSSSAALRGRNLYSYFPGGPMWP-PFRRNLRYAITATSATSIDRAT-LSAVFARAFSR 194
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAET 157
WA+ + F E ADI IGFY+GDHGDGE FDG LG LAH+FSP G+FHLDAAE
Sbjct: 195 WAAATRLQFTEVSSASNADITIGFYSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEA 254
Query: 158 WAV--DFGSEKS-PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
W D + S AVDLESVAVHEIGHLLGL HS V +++MYPT++ +KVDL DD
Sbjct: 255 WVASGDVSTSSSFGTAVDLESVAVHEIGHLLGLGHSSVPDSIMYPTIRTGTRKVDLESDD 314
Query: 215 IQGVQALYGSNPNF 228
+ G+Q+LYG+NPNF
Sbjct: 315 VLGIQSLYGTNPNF 328
>gi|226499088|ref|NP_001151749.1| metalloendoproteinase 1 precursor [Zea mays]
gi|195649493|gb|ACG44214.1| metalloendoproteinase 1 precursor [Zea mays]
Length = 365
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 119/179 (66%), Gaps = 4/179 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG P W L YA + + + + + + VF RAFS+WA+ + F ET
Sbjct: 146 YAYFPGGPTWPPFR-RDLKYAITATSAAS-IDRSTLSDVFARAFSRWAAATNLRFAETAS 203
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
ADI IGFY+G HGDGEPFDG LG LAH+FSP G+FHLDAAE W D +
Sbjct: 204 ESDADITIGFYSGSHGDGEPFDGPLGTLAHAFSPTDGRFHLDAAEAWVAGSDVSRSSATG 263
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
AVDLESVAVHEIGHLLGL HS V +A+MYPT++ +KV+L DD+QG+Q+LYGSNPNF
Sbjct: 264 AVDLESVAVHEIGHLLGLGHSSVPDAIMYPTIRTGTRKVELEADDVQGIQSLYGSNPNF 322
>gi|242092574|ref|XP_002436777.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
gi|241915000|gb|EER88144.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
Length = 370
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 118/179 (65%), Gaps = 5/179 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPG P W R L+YA ++ ++ + T + VF RAF++W++ ++F E D
Sbjct: 154 FTYFPGSPSWPRS-KKRLTYAITQTSLTSIDRAT-LSQVFARAFARWSAATTLNFTEAAD 211
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
D ADI I FY GDHGDGE FDG LG LAH+FSP G+FHLDAAE W D S
Sbjct: 212 DD-ADITIAFYAGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWVATGDVSRASSDA 270
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
AVDLESVAVHEIGHLLGL HS A+MYPT+ R +KVDLA DD+ G+Q LYG NPNF
Sbjct: 271 AVDLESVAVHEIGHLLGLGHSGEPSAIMYPTITSRTRKVDLAEDDVAGIQNLYGGNPNF 329
>gi|357118246|ref|XP_003560867.1| PREDICTED: metalloendoproteinase 1-like [Brachypodium distachyon]
Length = 383
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 124/189 (65%), Gaps = 6/189 (3%)
Query: 44 EATRHKKD-YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A+ H ++ Y FPG P W R +L YA + + T + VF RAF++W+
Sbjct: 151 SASIHGRNLYSYFPGSPSWPRS-KKSLKYAITATSATTIDRAT-LSQVFARAFARWSEAT 208
Query: 103 PVSFIETDDYDF-ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV- 160
++F ET D ADI IGF+ G+HGDGE FDG LG LAH+FSP G+FHLDAAE W
Sbjct: 209 TLNFTETTDAAGDADITIGFHGGEHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWVAG 268
Query: 161 -DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
D K+ AVDLESVAVHEIGHLLGL HS V+ A+MYPT+ R +KVDLA DD+ G+Q
Sbjct: 269 GDVSRAKADDAVDLESVAVHEIGHLLGLGHSAVEGAIMYPTITSRTRKVDLASDDVVGIQ 328
Query: 220 ALYGSNPNF 228
+LYG NPNF
Sbjct: 329 SLYGGNPNF 337
>gi|115467320|ref|NP_001057259.1| Os06g0239100 [Oryza sativa Japonica Group]
gi|51535159|dbj|BAD37871.1| putative metalloproteinase [Oryza sativa Japonica Group]
gi|51535823|dbj|BAD37908.1| putative metalloproteinase [Oryza sativa Japonica Group]
gi|113595299|dbj|BAF19173.1| Os06g0239100 [Oryza sativa Japonica Group]
gi|125596648|gb|EAZ36428.1| hypothetical protein OsJ_20758 [Oryza sativa Japonica Group]
Length = 371
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG PRW R TL YA + + + T + VF AF++W++ ++F E
Sbjct: 151 YSYFPGSPRWPRSR-TTLRYAITATSQTSIDRAT-LSKVFASAFARWSAATTLNFTEAAS 208
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
ADI IGFY GDHGDGE FDG LG LAH+FSP +G+ HLDA+E W D S
Sbjct: 209 AADADITIGFYGGDHGDGEAFDGPLGTLAHAFSPTNGRLHLDASEAWVAGGDVTRASSNA 268
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
AVDLESVAVHEIGH+LGL HS +++M+PTL R KKV+LA DD+ G+Q LYG+NPNF
Sbjct: 269 AVDLESVAVHEIGHILGLGHSSAADSIMFPTLTSRTKKVNLATDDVAGIQGLYGNNPNF 327
>gi|125554704|gb|EAZ00310.1| hypothetical protein OsI_22327 [Oryza sativa Indica Group]
Length = 371
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG PRW R TL YA + + + T + VF AF++W++ ++F E
Sbjct: 151 YSYFPGSPRWPRSR-TTLRYAITATSQTSIDRAT-LSKVFASAFARWSAATTLNFTEAAS 208
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
ADI IGFY GDHGDGE FDG LG LAH+FSP +G+ HLDA+E W D S
Sbjct: 209 AADADITIGFYGGDHGDGEAFDGPLGTLAHAFSPTNGRLHLDASEAWVAGGDVTRASSNA 268
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
AVDLESVAVHEIGH+LGL HS +++M+PTL R KKV+LA DD+ G+Q LYG+NPNF
Sbjct: 269 AVDLESVAVHEIGHILGLGHSSAADSIMFPTLTSRTKKVNLATDDVAGIQGLYGNNPNF 327
>gi|302772727|ref|XP_002969781.1| hypothetical protein SELMODRAFT_13930 [Selaginella moellendorffii]
gi|302823297|ref|XP_002993302.1| hypothetical protein SELMODRAFT_3042 [Selaginella moellendorffii]
gi|300138875|gb|EFJ05627.1| hypothetical protein SELMODRAFT_3042 [Selaginella moellendorffii]
gi|300162292|gb|EFJ28905.1| hypothetical protein SELMODRAFT_13930 [Selaginella moellendorffii]
Length = 301
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 124/188 (65%), Gaps = 6/188 (3%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAF-SKENMINYLHITDIKAVFKRAFSKWAS 100
P RH Y FP P+W L+YA + + + D+ A+F AF+ WA+
Sbjct: 118 PGLGVRH---YSFFPNSPKWESR--QLLTYAIDASAPAVTGIAAADLSALFADAFASWAA 172
Query: 101 VIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV 160
V+P++F E + ADIRI F +G+HGDG PFDG+LGVL H FSPE G+ H DAAETWA+
Sbjct: 173 VVPINFTEIPSFALADIRIIFAHGEHGDGRPFDGILGVLGHGFSPEDGRLHFDAAETWAL 232
Query: 161 DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
D S S AVDL+SVA+HEIGH+LGL HS ++ AVMYP + R+ K++L DDI+G Q
Sbjct: 233 DVSSSSSRSAVDLKSVAIHEIGHILGLGHSALESAVMYPNIGAREVKLELHSDDIEGAQM 292
Query: 221 LYGSNPNF 228
LYG+NPN+
Sbjct: 293 LYGANPNY 300
>gi|413938790|gb|AFW73341.1| metalloendoproteinase 1 [Zea mays]
Length = 237
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG P W L YA + + + + + VF RAFS+WA+ + F ET
Sbjct: 15 YAYFPGGPTWP-PFRRDLKYAITATSAAASIDRSTLSDVFARAFSRWAAATNLRFAETAS 73
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPV 169
ADI IGFY+G HGDGEPFDG LG LAH+FSP G+FHLDAAE W D +
Sbjct: 74 ESDADITIGFYSGSHGDGEPFDGPLGTLAHAFSPTDGRFHLDAAEAWVAGSDVSRSSATG 133
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
AVDLESVAVHEIGHLLGL HS V +A+MYPT++ +KV+L DD+QG+Q+LYGSNPNF
Sbjct: 134 AVDLESVAVHEIGHLLGLGHSSVPDAIMYPTIRTGTRKVELEADDVQGIQSLYGSNPNF 192
>gi|297840561|ref|XP_002888162.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334003|gb|EFH64421.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 125/187 (66%), Gaps = 12/187 (6%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITD-IKAVFKRAFSKWASVIPVS 105
R + Y FPGKPRW + L+YA+ +N ++TD +K VF RAF++WA V P++
Sbjct: 127 RATERYSFFPGKPRWPKR-KRDLTYAYVPQN-----NLTDEVKRVFARAFTRWAEVTPLN 180
Query: 106 FIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE 165
F ++ ADI IGF++G+HGDGEPFDG +G LAH+ SP +G HLD E W + G
Sbjct: 181 FTRSESLLGADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISDGEI 240
Query: 166 KSPV-----AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
V VDLESVAVHEIGHLLGL HS V++A+M+P + D+KV+LA DDI+G+Q
Sbjct: 241 SRRVLPVTSVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQH 300
Query: 221 LYGSNPN 227
LYG NPN
Sbjct: 301 LYGGNPN 307
>gi|242088519|ref|XP_002440092.1| hypothetical protein SORBIDRAFT_09g025870 [Sorghum bicolor]
gi|241945377|gb|EES18522.1| hypothetical protein SORBIDRAFT_09g025870 [Sorghum bicolor]
Length = 380
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 6/177 (3%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA-- 115
+P WTR P+ L+YA S + YL ++A F+ AF++WA VIPV F+ETD YD
Sbjct: 161 QPWWTRPHPLVLTYAVSPTATVGYLPAEAVRAAFRSAFARWARVIPVDFVETDYYDGGEP 220
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSF-SPESGKFHLDAAETWAVDFGSE---KSPVAV 171
DI +GFY GDHGDG PFDG G +AH++ S + G H DAAE W+VD GS+ + A+
Sbjct: 221 DIMVGFYEGDHGDGSPFDGRYGQVAHAYTSDDDGHIHFDAAEHWSVDVGSDTDTRGDSAM 280
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
DLESVA HEIGH+LGL HS EA+MYP + +KV+L+ DDI GV LYGSNP F
Sbjct: 281 DLESVATHEIGHILGLGHSSSPEAIMYPYIAAMQRKVELSADDIDGVLRLYGSNPRF 337
>gi|357121060|ref|XP_003562240.1| PREDICTED: metalloendoproteinase 1-like [Brachypodium distachyon]
Length = 321
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 134/197 (68%), Gaps = 11/197 (5%)
Query: 52 YVLFPGKPRWT-RHVPMTLSYAFSKENMI---NYLHITDIKAVFKRAFSKWASVIPVSFI 107
Y F G+PRW R TL+YA H + ++A F+RAF++WA VIPV F+
Sbjct: 87 YAYFDGQPRWAPRGRRFTLTYAIIPPPATPDDRLPHPSAVRAAFRRAFARWARVIPVRFV 146
Query: 108 ETD-------DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV 160
E Y+ AD+++GF++GDHGDGEPFDG LGVLAH+FSP SG+ HLDAAE W V
Sbjct: 147 ELATTAGSEFSYNTADVKVGFFSGDHGDGEPFDGPLGVLAHAFSPPSGQLHLDAAERWTV 206
Query: 161 DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
++ AVDLESVA HEIGH+LGL HS +AVMYP+LKP +KV+L DD++GVQA
Sbjct: 207 HLDDQEDSSAVDLESVATHEIGHVLGLAHSSAPDAVMYPSLKPGTRKVELTADDVRGVQA 266
Query: 221 LYGSNPNFTIGSLVESD 237
LYGSNP F++ SL E D
Sbjct: 267 LYGSNPRFSLSSLSEPD 283
>gi|326488589|dbj|BAJ93963.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534164|dbj|BAJ89432.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 365
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 46 TRHKKD-YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
T H ++ Y FPG P W R +L YA + T + VF AF++W++ +
Sbjct: 139 TVHGRNLYSYFPGSPSWPRS-KKSLRYAITAATETTIDRAT-LSRVFASAFARWSAATTL 196
Query: 105 SFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DF 162
+F ET ADI IGF++GDHGDGE FDG LG LAH+FSP G+FHLDA+E W D
Sbjct: 197 NFTETASASDADITIGFHSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDASEAWVAGGDV 256
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
AVDLESVAVHEIGHLLGL HS V+ A+MYPT+ R +KV+LA DD+ G+Q+LY
Sbjct: 257 SRASLDAAVDLESVAVHEIGHLLGLGHSSVEGAIMYPTITSRTQKVELANDDVVGIQSLY 316
Query: 223 GSNPNF 228
G NPNF
Sbjct: 317 GGNPNF 322
>gi|168053496|ref|XP_001779172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669431|gb|EDQ56018.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-S 105
R + FPG PRW +T +A S + L DI++ F AF WA+ + + +
Sbjct: 85 RKVTRFAYFPGNPRWNSRFKLT--WALSPSMVTQRLSRDDIRSAFTHAFQLWAATVSMFN 142
Query: 106 FIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE 165
F E DY AD++I F G+HGD + FDGVLG++AH+FSPE G+ H D AE W+VD S+
Sbjct: 143 FTEVQDYHSADVKICFVAGEHGDAQNFDGVLGIIAHAFSPEDGRVHFDDAEFWSVDVNSD 202
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
KSP A+DL SVA+HE+GH++GL HSP+K++VM+P++ PR K +L+ DD+QGV+ LYG
Sbjct: 203 KSPQALDLTSVAIHEVGHVIGLAHSPMKKSVMFPSISPRHTKRELSDDDVQGVRQLYG 260
>gi|326502188|dbj|BAJ98922.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 365
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 119/186 (63%), Gaps = 5/186 (2%)
Query: 46 TRHKKD-YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
T H ++ Y FPG P W R +L YA + T + VF AF++W++ +
Sbjct: 139 TVHGRNLYSYFPGSPSWPRS-KKSLRYAITAATETTIDRAT-LSRVFASAFARWSAATTL 196
Query: 105 SFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DF 162
+F ET ADI IGF++GDHGDGE FDG LG LAH+FSP G+FHLDA+E W D
Sbjct: 197 NFTETASASDADITIGFHSGDHGDGEAFDGPLGTLAHAFSPTDGRFHLDASEAWVAGGDV 256
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
AVDLESVAVHEIGHLLGL H V+ A+MYPT+ R +KV+LA DD+ G+Q+LY
Sbjct: 257 SRASLDAAVDLESVAVHEIGHLLGLGHLSVEGAIMYPTITSRTQKVELANDDVVGIQSLY 316
Query: 223 GSNPNF 228
G NPNF
Sbjct: 317 GGNPNF 322
>gi|15218963|ref|NP_176205.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
gi|4249376|gb|AAD14473.1| Strong similarity to gi|2829864 F3I6.6 zinc metalloproteinase
homolog from Arabidopsis thaliana BAC gb|AC002396. EST
gb|Z26412 comes from this gene [Arabidopsis thaliana]
gi|51971615|dbj|BAD44472.1| predicted GPI-anchored protein [Arabidopsis thaliana]
gi|94442451|gb|ABF19013.1| At1g59970 [Arabidopsis thaliana]
gi|332195524|gb|AEE33645.1| matrix metalloprotease domain-containing protein [Arabidopsis
thaliana]
Length = 360
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 122/182 (67%), Gaps = 12/182 (6%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITD-IKAVFKRAFSKWASVIPVS 105
R + Y FPGKPRW + L+YAF+ +N ++TD +K VF RAF++WA V P++
Sbjct: 138 RTTEKYSFFPGKPRWPKR-KRDLTYAFAPQN-----NLTDEVKRVFSRAFTRWAEVTPLN 191
Query: 106 FIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE 165
F ++ ADI IGF++G+HGDGEPFDG +G LAH+ SP +G HLD E W + G
Sbjct: 192 FTRSESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEI 251
Query: 166 KSPV-----AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
+ VDLESVAVHEIGHLLGL HS V++A+M+P + D+KV+LA DDI+G+Q
Sbjct: 252 SRRILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQH 311
Query: 221 LY 222
LY
Sbjct: 312 LY 313
>gi|357143953|ref|XP_003573113.1| PREDICTED: metalloendoproteinase 1-like [Brachypodium distachyon]
Length = 383
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 128/207 (61%), Gaps = 8/207 (3%)
Query: 45 ATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
+ R + Y FPG P W L YA + + I+ + + VF+RAF++WA+ +
Sbjct: 144 SARGRHLYAYFPGGPSWPPFR-RELRYAITASSAIS-IDKAALSGVFERAFARWAAATTL 201
Query: 105 SFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV---- 160
F E + ADI IGFY G HGDGE FDG LG LAH+FSP G+FHLDAAE WAV
Sbjct: 202 RFAEAESAADADITIGFYAGAHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAWAVSGSG 261
Query: 161 --DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
D +VDLESVAVHEIGHLLGL HS V+ A+MYPT++ +KV+L DD++G+
Sbjct: 262 GDDSSGGPGSASVDLESVAVHEIGHLLGLGHSSVQGAIMYPTIRTGTRKVELRQDDVEGI 321
Query: 219 QALYGSNPNFTIGSLVESDISTNLAVD 245
Q+LYGSNP+F G S +++ D
Sbjct: 322 QSLYGSNPDFKGGVAPTSPSTSSRETD 348
>gi|14165330|gb|AAK55462.1|AC069300_17 putative metalloproteinase [Oryza sativa Japonica Group]
Length = 289
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 20/207 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPGKPRWTR L+YA S ++L + ++A + AF++WA VIP+ F+E +
Sbjct: 45 FTFFPGKPRWTR-PDRVLTYAVSPTATADHLPPSAVRAALRSAFARWADVIPMRFLEAER 103
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVL---------------GVLAHSFSPE-SGKFHLDAA 155
YD ADI++GFY + DG DG GVLAHS PE SG+ HL AA
Sbjct: 104 YDAADIKVGFYL--YTDGR-CDGCACIDSDDDDDDGDDCEGVLAHSSMPEKSGQIHLHAA 160
Query: 156 ETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDI 215
W V+ ++ +P+AVDLESVA HEIGH+LGL HS + ++MYP + R++KV L DD+
Sbjct: 161 HRWTVNLAADTAPLAVDLESVAAHEIGHVLGLDHSSSRSSMMYPFISCRERKVRLTTDDV 220
Query: 216 QGVQALYGSNPNFTIGSLVESDISTNL 242
G+Q LYG+NP+F+ G+ + DI + +
Sbjct: 221 HGIQELYGANPHFSFGAYFKQDILSRI 247
>gi|125532924|gb|EAY79489.1| hypothetical protein OsI_34617 [Oryza sativa Indica Group]
gi|222613251|gb|EEE51383.1| hypothetical protein OsJ_32432 [Oryza sativa Japonica Group]
Length = 265
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 20/207 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPGKPRWTR L+YA S ++L + ++A + AF++WA VIP+ F+E +
Sbjct: 21 FTFFPGKPRWTR-PDRVLTYAVSPTATADHLPPSAVRAALRSAFARWADVIPMRFLEAER 79
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVL---------------GVLAHSFSPE-SGKFHLDAA 155
YD ADI++GFY + DG DG GVLAHS PE SG+ HL AA
Sbjct: 80 YDAADIKVGFYL--YTDGR-CDGCACIDSDDDDDDGDDCEGVLAHSSMPEKSGQIHLHAA 136
Query: 156 ETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDI 215
W V+ ++ +P+AVDLESVA HEIGH+LGL HS + ++MYP + R++KV L DD+
Sbjct: 137 HRWTVNLAADTAPLAVDLESVAAHEIGHVLGLDHSSSRSSMMYPFISCRERKVRLTTDDV 196
Query: 216 QGVQALYGSNPNFTIGSLVESDISTNL 242
G+Q LYG+NP+F+ G+ + DI + +
Sbjct: 197 HGIQELYGANPHFSFGAYFKQDILSRI 223
>gi|222613252|gb|EEE51384.1| hypothetical protein OsJ_32433 [Oryza sativa Japonica Group]
Length = 235
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 112/181 (61%), Gaps = 23/181 (12%)
Query: 52 YVLFPGKPRWTRH-VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
Y + GKPRWTRH PM L+YA S + + YL + AVF+ AF+
Sbjct: 48 YAFWTGKPRWTRHGRPMVLTYAVSHTDAVGYLPGDAVLAVFRSAFA-------------- 93
Query: 111 DYDFADIRIGFYN-GDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
R+GFY G+HGDG PFDG L V AH+ PE G+ DAAE WAVD ++ SP
Sbjct: 94 -------RVGFYGAGEHGDGHPFDGPLNVYAHATGPEDGRIDFDAAERWAVDLAADASPA 146
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
AVDLE+VA HEIGH LGL HS + +VMYP + R++KV L +DD++G+Q LYG NP+F+
Sbjct: 147 AVDLETVATHEIGHALGLDHSTSESSVMYPYVGTRERKVRLTVDDVEGIQELYGVNPSFS 206
Query: 230 I 230
Sbjct: 207 F 207
>gi|242062568|ref|XP_002452573.1| hypothetical protein SORBIDRAFT_04g028370 [Sorghum bicolor]
gi|241932404|gb|EES05549.1| hypothetical protein SORBIDRAFT_04g028370 [Sorghum bicolor]
Length = 368
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 115/182 (63%), Gaps = 8/182 (4%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFS--KENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
Y F G+P W L YA + E I+ ++D+ A ++ ++ F ET
Sbjct: 151 YAYFAGEPTWPP-FRRDLKYAITATSETSIDRSTLSDVFARAFARWAAATNL---RFEET 206
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKS 167
ADI IGFY G HGDGEPFDG LG LAH+FSP G+FHLDAAE W D +
Sbjct: 207 ASESDADITIGFYAGSHGDGEPFDGPLGTLAHAFSPTDGRFHLDAAEAWVAGSDVSLSST 266
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
AVDLESVAVHEIGHLLGL HS V +A+MYPT++ +KV+L DD+QG+Q+LYGSNPN
Sbjct: 267 SGAVDLESVAVHEIGHLLGLGHSSVPDAIMYPTIRTGTRKVELEADDVQGIQSLYGSNPN 326
Query: 228 FT 229
FT
Sbjct: 327 FT 328
>gi|351724817|ref|NP_001235535.1| metalloendoproteinase 1 precursor [Glycine max]
gi|2827777|sp|P29136.2|MEP1_SOYBN RecName: Full=Metalloendoproteinase 1; AltName: Full=SMEP1; Flags:
Precursor
gi|1679656|gb|AAB26959.1| metalloproteinase [Glycine max]
Length = 305
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 111/178 (62%), Gaps = 7/178 (3%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
DY F PRW L+YAFS E ++ K+ RAFSKW V+ ++F ET
Sbjct: 133 DYTFFKDMPRWQAGT-TQLTYAFSPEPRLD----DTFKSAIARAFSKWTPVVNIAFQETT 187
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV- 169
Y+ A+I+I F + +HGD PFDG G+L H+F+P G+ H DA E W KSPV
Sbjct: 188 SYETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVT 247
Query: 170 -AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
A DLESVAVHEIGHLLGL HS A+MYP++ PR +KV+LA DDI G++ LYG NP
Sbjct: 248 SAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLYGINP 305
>gi|255640072|gb|ACU20327.1| unknown [Glycine max]
Length = 305
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
DY F PRW L+YAFS E ++ K+ RAFSKW V+ ++F ET
Sbjct: 133 DYTFFKDMPRWQAGT-TQLTYAFSPEPRLD----DTFKSAIARAFSKWTPVVNIAFQETT 187
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV- 169
Y+ A+I+I F + +HGD PFDG G+L H+F+P G+ H DA E W KSPV
Sbjct: 188 SYETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVT 247
Query: 170 -AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
A DLESVAVHEIGHLLGL HS A+MYP++ PR +KV+LA D I G++ LYG NP
Sbjct: 248 SAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDGIDGIRKLYGINP 305
>gi|118488262|gb|ABK95950.1| unknown [Populus trichocarpa]
Length = 304
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G P+W R L+Y F + + + + +++V AF KW+ V P++F E D
Sbjct: 138 YTFFNGMPKW-RPSKYHLTYTFGSDG-VQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASD 195
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
A+I I FY GDHGDG PFDG +LAH+FSPE+G+FH DA E W+ + ++ +
Sbjct: 196 GASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFHYDADEKWSTNPAMDQ----I 251
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
DLESVAVHEIGHLLGL HS AVMYP++ KK +LA DDI G+ ALYG+
Sbjct: 252 DLESVAVHEIGHLLGLAHSSDSNAVMYPSIAAGTKKRNLAQDDIDGIHALYGN 304
>gi|224162231|ref|XP_002338425.1| predicted protein [Populus trichocarpa]
gi|222872207|gb|EEF09338.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G P+W R L+Y F + + + + +++V AF KW+ V P++F E D
Sbjct: 138 YTFFNGMPKW-RPSKYHLTYTFGSDG-VQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASD 195
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
A+I I FY GDHGDG PFDG +LAH+FSPE+G+FH DA E W+ + ++ +
Sbjct: 196 GASANIVIAFYRGDHGDGYPFDGPGKILAHAFSPENGRFHYDADEKWSTNPAMDQ----I 251
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
DLESVAVHEIGHLLGL HS AVMYP++ KK +LA DDI G+ ALYG+
Sbjct: 252 DLESVAVHEIGHLLGLAHSSDSNAVMYPSIAAGTKKRNLAQDDIDGIHALYGN 304
>gi|384337|prf||1905425A metalloprotease
Length = 171
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 7/176 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F PRW L+YAFS E ++ K+ RAFSKW V+ ++F ET
Sbjct: 1 YTFFKDMPRWQAGT-TQLTYAFSPEPRLD----DTFKSAIARAFSKWTPVVNIAFQETTS 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV-- 169
Y+ A+I+I F + +HGD PFDG G+L H+F+P G+ H DA E W KSPV
Sbjct: 56 YETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTS 115
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
A DLESVAVHEIGHLLGL HS A+MYP++ PR +KV+LA DDI G++ LYG N
Sbjct: 116 AFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLYGIN 171
>gi|224155037|ref|XP_002337555.1| predicted protein [Populus trichocarpa]
gi|222839559|gb|EEE77896.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 111/173 (64%), Gaps = 6/173 (3%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G P+W R L+Y F + + + + +++V AF KW+ V P++F E D
Sbjct: 5 YTFFNGMPKW-RPSKYHLTYTFGSDG-VQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASD 62
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
A+I I FY+GDHGDG PFDG +LAH+FSPE+G+FH DA E W+ + ++ +
Sbjct: 63 GASANIVIAFYSGDHGDGYPFDGPGKILAHAFSPENGRFHYDADEKWSTNPAMDQ----I 118
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
DLESVAVHEIGHLLGL HS AVMYP++ KK +LA DDI G+ ALYG+
Sbjct: 119 DLESVAVHEIGHLLGLAHSSDSNAVMYPSIAAGTKKRNLAQDDIDGIHALYGN 171
>gi|168044978|ref|XP_001774956.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673703|gb|EDQ60222.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 294
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Query: 37 SDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
S+ Y P + + FPG RWT+ L+YA + + + + + D + +AF+
Sbjct: 99 SNPYVPGTQHLGVQHWSSFPGGRRWTKK---NLTYAINLSTISSGVSVVDTQNTIDKAFA 155
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAE 156
W + I ++F + + ADIRI F DHGDG FDG LGVLAH+F+P G+ H D E
Sbjct: 156 TWQAAITLNFTRIMNIETADIRISFDALDHGDGNAFDGPLGVLAHAFAPTDGRLHFDMEE 215
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQ 216
W +D + S + DL SVA+HEIGH+LGL HS ++A+MYP++ P K L DD+
Sbjct: 216 YWTIDVKTATSSGSFDLLSVAIHEIGHILGLEHSNFQDAIMYPSISPLVAKQSLHADDVA 275
Query: 217 GVQALYGSNPNFTIGSLVE 235
GVQALY ++P +T + E
Sbjct: 276 GVQALYEADPKYTGSPVTE 294
>gi|359497687|ref|XP_003635607.1| PREDICTED: metalloendoproteinase 1-like, partial [Vitis vinifera]
Length = 234
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 98/131 (74%), Gaps = 12/131 (9%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
SP+C +TP + TRH + F GKPRW R PMTL+Y+FS+ENMI
Sbjct: 116 SPRCGVSDTTP---------LEDVHETRH---FAYFYGKPRWARVPPMTLTYSFSRENMI 163
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
L+ +++K+VF+RAFS+WASVIPV+F ET+D+ ADI+IGFY+GDHGDGEPFDGVLGVL
Sbjct: 164 ESLNSSEMKSVFERAFSRWASVIPVNFTETEDFGSADIKIGFYSGDHGDGEPFDGVLGVL 223
Query: 140 AHSFSPESGKF 150
AH+FSP++G+F
Sbjct: 224 AHAFSPQNGRF 234
>gi|297811613|ref|XP_002873690.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319527|gb|EFH49949.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 190
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 107/183 (58%), Gaps = 10/183 (5%)
Query: 19 ESPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENM 78
+S Q + R + + + R K Y FPGKPRW + L+YAF ++N
Sbjct: 8 DSRQIVKPRCGNPDTIDGVSEMNGGRKLRTTKRYSFFPGKPRWPKR-KRDLTYAFVQQNN 66
Query: 79 INYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
+ D+K VF RAF++WA V P++F ++ ADI IGF++G+HGDGEPFDG +G
Sbjct: 67 LT----DDVKRVFARAFTQWAEVTPLNFTRSESLLGADIVIGFFSGEHGDGEPFDGAMGT 122
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPV-----AVDLESVAVHEIGHLLGLTHSPVK 193
LAH+ SP G HLD E W + G V VDLESVAVHEIGHLLGL HS V+
Sbjct: 123 LAHASSPPKGMLHLDGDEDWLISDGEISRRVLPVTSVVDLESVAVHEIGHLLGLGHSSVE 182
Query: 194 EAV 196
+A+
Sbjct: 183 DAI 185
>gi|296086490|emb|CBI32079.3| unnamed protein product [Vitis vinifera]
Length = 334
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 94/153 (61%), Gaps = 26/153 (16%)
Query: 94 AFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLD 153
AF +WA+V P++F E+D Y AD+RI FY GDHGDGE FDG
Sbjct: 148 AFERWAAVTPLTFTESDSYYSADLRIAFYTGDHGDGEAFDG------------------- 188
Query: 154 AAETWAV--DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA 211
E W D + A+DLESVAVHEIGHLLGL HS V+EA+MYPT+ R KKV+LA
Sbjct: 189 --ENWVATGDVTTSSISSAIDLESVAVHEIGHLLGLGHSSVEEAIMYPTITSRTKKVELA 246
Query: 212 LDDIQGVQALYGSNPNFTIGSLV---ESDISTN 241
DDIQG+Q LYGSNPN+ S ES+ + N
Sbjct: 247 SDDIQGIQELYGSNPNYNGSSTSPSQESETTNN 279
>gi|449442791|ref|XP_004139164.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 314
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 102/171 (59%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG+ RW L+YAF D KA RAF+ WA F +
Sbjct: 153 YAFFPGRLRWPS-TKYRLTYAFLPGTR------ADAKAPVARAFATWARNTHFKFTLVTN 205
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y AD++IGFY G+HGDG PFDG G LAH+F+P G+FH D+ E WAV G+ +
Sbjct: 206 YRRADLKIGFYRGNHGDGYPFDGPGGTLAHAFAPTDGRFHYDSTEKWAV--GAVRG--RY 261
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DL++VA+HEIGHLLGL HS VK A+MYP +K K L +DDI+G++ LY
Sbjct: 262 DLQTVALHEIGHLLGLGHSTVKNAIMYPYIKSGSTK-GLNVDDIKGIKVLY 311
>gi|359485078|ref|XP_003633209.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 319
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 103/171 (60%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G PRW L+YAF ++ T + AV RAF +WAS +F ET D
Sbjct: 147 YSFFAGSPRWPP-SNTHLTYAF-----LSGTSSTTMSAV-TRAFGQWASATDFTFAETQD 199
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y AD++IGF GDHGDG PFDG G +AHSFSP G+ H D E+W V A
Sbjct: 200 YTNADMKIGFQRGDHGDGFPFDGPGGTIAHSFSPTDGRLHFDGDESWVVG----AVAGAF 255
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
D+E+VA+HEIGHLLGL HS V+ A+++PT+ K L DDIQG+QALY
Sbjct: 256 DVETVALHEIGHLLGLGHSSVEGAIIFPTIAFGVTK-GLNEDDIQGIQALY 305
>gi|147790365|emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]
Length = 319
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 101/171 (59%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y G PRW L+YAF ++ T + AV RAF +WAS SF ET D
Sbjct: 147 YSFLAGSPRWPP-SKTHLTYAF-----LSGTPSTTMSAV-TRAFGQWASATNFSFAETQD 199
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y AD++IGF GDHGDG PFDG G +AHSF P G+ H D E+W V A
Sbjct: 200 YTNADMKIGFQRGDHGDGHPFDGPGGTIAHSFPPTDGRLHFDGDESWVVG----AVAGAF 255
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
D+E+VA+HEIGHLLGL HS V+ A+M+PT+ K L DDIQG+QALY
Sbjct: 256 DVETVALHEIGHLLGLGHSSVEGAIMFPTIAYGVTK-GLNEDDIQGIQALY 305
>gi|255552736|ref|XP_002517411.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
gi|223543422|gb|EEF44953.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
Length = 311
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 21 PQCIA---VRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKE 76
P+C + T + + + + + + H Y FPG PRW L+Y F
Sbjct: 116 PRCGVADIINGTTRMQSSNKNPHHHSSTSFHTVSHYEFFPGNPRWPA-SKYHLTYGF--- 171
Query: 77 NMINYLHITDIKAV--FKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
L T +A+ +AF WA+ F DY ADI IGF+ GDHGDG PFDG
Sbjct: 172 -----LPGTPNQAMEPVAKAFQTWAANTHFRFTRVQDYRAADITIGFHRGDHGDGSPFDG 226
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F+P+ G+FH D E WAV + A D+E+VA+HEIGHLLGL HS V+
Sbjct: 227 RGGTLAHAFAPQDGRFHYDGDEHWAVG----ATQGAFDVETVALHEIGHLLGLGHSSVEG 282
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALY 222
A+M+P+++ K L DDIQG++ALY
Sbjct: 283 AIMHPSIQSGATK-GLHSDDIQGIRALY 309
>gi|224125522|ref|XP_002319607.1| predicted protein [Populus trichocarpa]
gi|222857983|gb|EEE95530.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G PRW L+Y FS + + + + ++++ RAF KWA V +F E +
Sbjct: 1 YSFFGGTPRWPS-SKFHLTYTFS--SSVQVIDMQELRSACSRAFQKWADVTQFTFQEASE 57
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
ADI IGF +GDHGD PFDG +LAH+F+P G+FH DA E W+ + +++ V
Sbjct: 58 GSQADIVIGFQSGDHGDRYPFDGPGRILAHAFAPTDGRFHYDADEKWSTNPSADE----V 113
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DLESVAVHEIGHLLGL HS + ++M+ + K DL DDI G++ALY
Sbjct: 114 DLESVAVHEIGHLLGLDHSMDQNSIMFAEIPQGTIKRDLGQDDIAGIRALY 164
>gi|449442789|ref|XP_004139163.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 315
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 102/171 (59%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG+PRW P T Y + E + N D KA RAF+ WA F +
Sbjct: 152 YSFFPGRPRW----PPT-KYHLTYEFLPNTH--ADAKAPVTRAFATWARHTHFKFSLATN 204
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
AD++IGFY G+HGDG PFDG G LAH+F+P G+ H D+ E W V G+ +
Sbjct: 205 SRRADLKIGFYRGNHGDGYPFDGSGGTLAHAFTPTDGRVHFDSTEKWVV--GAVRG--RF 260
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DLE+VA+HEIGHLLGL HS VK A+MYPT++ K L DDI+G++ LY
Sbjct: 261 DLETVALHEIGHLLGLGHSRVKNAIMYPTIESGSTK-GLNADDIEGIEVLY 310
>gi|225452578|ref|XP_002280805.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 321
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 12/187 (6%)
Query: 39 KYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
++D + H Y FPG PRW L+YAF + K RAF K
Sbjct: 146 RHDQGHGSLHTVSHYQFFPGSPRWPTSNNAHLTYAFLPGTP------DEAKIPVSRAFGK 199
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAET 157
WAS +F +T+D+ A++ I F++ HGD PFDG G +AH+++P G+FH DA E
Sbjct: 200 WASATSFTFAQTEDHRNANLTISFHSLLHGDWNPFDGPGGTIAHAYAPTDGRFHYDADEE 259
Query: 158 WAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQG 217
W+V P A+D+E+VA+HEIGHLLGL HS V+EA+M+P++ K L DDI+G
Sbjct: 260 WSVG----AVPGALDVETVALHEIGHLLGLGHSSVREAIMFPSISTGVTK-GLHRDDIEG 314
Query: 218 VQALYGS 224
++ALY +
Sbjct: 315 IRALYNA 321
>gi|255586613|ref|XP_002533939.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
gi|223526094|gb|EEF28446.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
Length = 226
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G+PRW L Y F + +I ++ RAF KWA V +F E
Sbjct: 60 YKFFHGEPRWPAERTH-LRYRFRSSTQVPG--TQNIGSICARAFQKWAEVTHFTFEEVAS 116
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVA- 170
A+I IGF+ HGDG PFDG G LAH+ +P G FH D E W+ ++P A
Sbjct: 117 NAQAEIEIGFHRRSHGDGHPFDGRSGTLAHATAPTGGMFHFDGDENWS------ENPEAN 170
Query: 171 -VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
VDLESVAVHEIGHLLGL HS AVMY T + K DL DD+QG++ALYG
Sbjct: 171 EVDLESVAVHEIGHLLGLHHSDDPNAVMYATFRYGITKRDLDSDDVQGIRALYG 224
>gi|449449417|ref|XP_004142461.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 316
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV--FKRAFSKWASVIPVSFIET 109
Y F G P+W P + S+ +L T KAV RAF W + +F +T
Sbjct: 155 YAFFDGNPKW----PASKSHL-----TYGFLPGTPSKAVATIGRAFKTWGANTHFNFSQT 205
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
Y ADI+I F GDHGDG FDGV GV+AH F+P G+ H DAAE+WAV ++
Sbjct: 206 SRYKKADIKISFETGDHGDGHSFDGVRGVIAHGFAPRDGRLHFDAAESWAVGAIAD---- 261
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
+ DLE++A+HEIGHLLGL HS ++ A+M+P++ K L DDI G+ ALY +N
Sbjct: 262 SFDLETIALHEIGHLLGLYHSSIERAIMWPSIMEGSTK-GLDADDIAGINALYNAN 316
>gi|449492743|ref|XP_004159087.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 457
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 102/176 (57%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV--FKRAFSKWASVIPVSFIET 109
Y F G P+W L+Y F L T KAV RAF W + +F +T
Sbjct: 296 YAFFDGNPKWPA-SKSHLTYGF--------LPGTPSKAVATIGRAFKTWGANTHFNFSQT 346
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
Y ADI+I F GDHGDG FDGV GV+AH F+P G+ H DAAE+WAV ++
Sbjct: 347 SRYKKADIKISFETGDHGDGHSFDGVRGVIAHGFAPRDGRLHFDAAESWAVGAIAD---- 402
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
+ DLE++A+HEIGHLLGL HS ++ A+M+P++ K L DDI G+ ALY +N
Sbjct: 403 SFDLETIALHEIGHLLGLYHSSIERAIMWPSIMEGSTK-GLDADDIAGINALYNAN 457
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHL 152
A ++WA+ +F E D ADI I F DH DG FDG GV+ H+F+P G+ HL
Sbjct: 16 EAMARWAAQSLFTFSEASDAQSADINISFQVKDHADGSAFDGPGGVVGHAFAPTDGRLHL 75
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
D ++W+ K ++ +VA+HE+GH+LGL HS + +AVM+P + K +L
Sbjct: 76 DGDDSWSAGLEENK----FNVMNVALHELGHVLGLAHSTLPQAVMWPYIDSNALK-NLND 130
Query: 213 DDIQGVQAL 221
DDI G+ AL
Sbjct: 131 DDIAGLHAL 139
>gi|356573412|ref|XP_003554855.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 304
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE-- 108
+Y F G P+W L+Y F N L + D++ + AF WA +F+E
Sbjct: 136 NYSFFSGSPKW-EESKRALTYTFVSS--ANVLRMYDVRLATRNAFQSWARASNFTFMEMP 192
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
++ + A+I +GF+ GDHGDG PFDG VLAH+F+P+ G+ H DA E W++ +S
Sbjct: 193 SEYNNLANIVLGFHRGDHGDGYPFDGPGQVLAHTFAPQDGRLHFDADEPWSIG----QSR 248
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+DL++VA+HEIGHLLGL HS V ++MYP+ + K DL DD+ G++ALY
Sbjct: 249 RTIDLQTVALHEIGHLLGLGHSNVPGSIMYPSYE--GVKRDLTQDDVDGIRALY 300
>gi|225452580|ref|XP_002280833.1| PREDICTED: metalloendoproteinase 1 [Vitis vinifera]
gi|147807820|emb|CAN73129.1| hypothetical protein VITISV_030257 [Vitis vinifera]
Length = 319
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 101/171 (59%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG PRW L+YAF N+ + RA+ +W S +F D
Sbjct: 159 YSFFPGSPRWPP-SKTYLTYAF-LPGTPNW-----AMSPVSRAYGRWDSATHFTFGWIQD 211
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y AD+ I F+ DHGDG PFDG G +AH+F+P +G+FH D ETW++ P A+
Sbjct: 212 YTSADMTISFHRLDHGDGSPFDGPGGTIAHAFAPTNGRFHYDGDETWSIG----AVPNAM 267
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DLE+VA+HEIGHLLGL HS V+ A+M+P++ K L DDIQG++ALY
Sbjct: 268 DLETVALHEIGHLLGLGHSSVQNAIMFPSISTGVTK-GLHEDDIQGIRALY 317
>gi|147807821|emb|CAN73130.1| hypothetical protein VITISV_030258 [Vitis vinifera]
Length = 437
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 12/185 (6%)
Query: 39 KYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
++D + H Y FPG PRW L+YAF + K RAF K
Sbjct: 146 RHDQGHGSLHTVSHYQFFPGSPRWPTSNNAHLTYAFLPGTP------DEAKIPVSRAFGK 199
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAET 157
WAS +F +T+D+ A++ I F++ HGD PFDG G +AH+++P G+FH DA E
Sbjct: 200 WASATSFTFAQTEDHRNANLTISFHSLLHGDWNPFDGPGGTIAHAYAPTDGRFHYDADEE 259
Query: 158 WAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQG 217
W+V P +D+E+VA+HEIGHLLGL HS V+EA+M+P++ K L DDI+G
Sbjct: 260 WSVG----AVPGXLDVETVALHEIGHLLGLGHSSVREAIMFPSISTGVTK-GLHRDDIEG 314
Query: 218 VQALY 222
++A+Y
Sbjct: 315 IRAVY 319
>gi|225452586|ref|XP_002275671.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 303
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 96/174 (55%), Gaps = 18/174 (10%)
Query: 52 YVLFPGKPRW---TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
Y FP KPRW RH+ +L A E AF WA V +F
Sbjct: 143 YAFFPNKPRWPAGKRHLLYSLDSASHPE----------AANAVANAFGAWAGVTNFTFER 192
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
T D A++ I F DHGDG PFDG G+LAH+F+P G+FH D ETW + +
Sbjct: 193 TSDPKIANLYISFKVRDHGDGRPFDGRGGILAHAFAPTDGRFHFDGDETWVIGAVAN--- 249
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
++DL++VA HEIGHLLGL H+PV+EA+MY + P K L DDI G++ALY
Sbjct: 250 -SMDLQTVARHEIGHLLGLAHTPVQEAIMYAIISPGVTK-GLNQDDIDGIRALY 301
>gi|296087731|emb|CBI34987.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 96/174 (55%), Gaps = 18/174 (10%)
Query: 52 YVLFPGKPRW---TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
Y FP KPRW RH+ +L A E AF WA V +F
Sbjct: 136 YAFFPNKPRWPAGKRHLLYSLDSASHPE----------AANAVANAFGAWAGVTNFTFER 185
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
T D A++ I F DHGDG PFDG G+LAH+F+P G+FH D ETW + +
Sbjct: 186 TSDPKIANLYISFKVRDHGDGRPFDGRGGILAHAFAPTDGRFHFDGDETWVIGAVAN--- 242
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
++DL++VA HEIGHLLGL H+PV+EA+MY + P K L DDI G++ALY
Sbjct: 243 -SMDLQTVARHEIGHLLGLAHTPVQEAIMYAIISPGVTK-GLNQDDIDGIRALY 294
>gi|449449419|ref|XP_004142462.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
gi|449492747|ref|XP_004159088.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 319
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 103/173 (59%), Gaps = 16/173 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV--FKRAFSKWASVIPVSFIET 109
+ F G P+W P T S+ +L T + V RAF+ WA+ +F +
Sbjct: 157 FAFFDGNPKW----PATKSHL-----TYGFLPGTPSETVSPVARAFATWAANSHFTFSQA 207
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
D +DI IGF GDHGDG PFDGV GV+AH+FSP G+FHLDA E+WA S+
Sbjct: 208 LDNQTSDITIGFETGDHGDGYPFDGVGGVVAHAFSPSDGRFHLDADESWANGVVSD---- 263
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+ DLE+VA+HEIGHLLGL HS + A+M+P + P L +DDI G++ALY
Sbjct: 264 SFDLETVALHEIGHLLGLQHSSTEGAIMWPQV-PVGASKGLHVDDIAGIKALY 315
>gi|356573414|ref|XP_003554856.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 299
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
++Y FPG PRW + L+YA ++ + ++ + A KWA V +F E
Sbjct: 136 ENYSFFPGSPRWRK---WALTYALLSGATVSTISGNAVRQAMQNALQKWAQVSNFTFTEI 192
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
ADI GF+ G+HGDG PFDG VLAH+FSP+ G+ H DA E W + GS
Sbjct: 193 GRTP-ADIVYGFHRGNHGDGYPFDGPGRVLAHAFSPQDGRLHYDADEQWNSNDGSN---- 247
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
VD E+V +HE+GH+ GL HS V AVM+PT + L+ DDI G++ALYG
Sbjct: 248 -VDFETVTLHELGHIFGLGHSNVTGAVMFPTYAGLRRF--LSQDDIDGIRALYG 298
>gi|296087728|emb|CBI34984.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 20/180 (11%)
Query: 31 KFKLKQSDKYDPAEATRHKKD---------YVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ LK + K D +E RH + Y FPG PRW L+YAF
Sbjct: 492 NYHLKATGKLD-SETKRHDQGHGSLHTVSHYQFFPGSPRWPTSNNAHLTYAFLPGTP--- 547
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
+ K RAF KWAS +F +T+D+ A++ I F++ HGD PFDG G +AH
Sbjct: 548 ---DEAKIPVSRAFGKWASATSFTFAQTEDHRNANLTISFHSLLHGDWNPFDGPGGTIAH 604
Query: 142 SFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
+++P G+FH DA E W+V P A+D+E+VA+HEIGHLLGL HS V+EA+M+P++
Sbjct: 605 AYAPTDGRFHYDADEEWSVG----AVPGALDVETVALHEIGHLLGLGHSSVREAIMFPSI 660
>gi|224097718|ref|XP_002311052.1| predicted protein [Populus trichocarpa]
gi|222850872|gb|EEE88419.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 100/175 (57%), Gaps = 12/175 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y PG RW + L+Y F + + +I+++ +AF +WA V +F E
Sbjct: 141 YNFIPGNRRWAK---RQLTYKF--RSSVQVPAAQNIRSICAKAFRRWAQVTEFTFQEVSV 195
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK-FHLDAAETWAVDFGSEKSPVA 170
ADI IGF+ GDH DG+ FDG GVLAH+ P S FH DA E W+ + G P
Sbjct: 196 SSPADIVIGFHRGDHNDGKAFDGPQGVLAHATPPASDAIFHFDADENWSENPG----PNQ 251
Query: 171 VDLESVAVHEIGHLLGLTHS--PVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+DLESVAVHEIGHLLGL H+ P +A+M + K DL DDIQGV+ALYG
Sbjct: 252 MDLESVAVHEIGHLLGLDHNDDPNADAIMSSGIPSGIAKRDLRADDIQGVRALYG 306
>gi|14165327|gb|AAK55459.1|AC069300_14 putative metalloproteinase [Oryza sativa Japonica Group]
gi|125532923|gb|EAY79488.1| hypothetical protein OsI_34616 [Oryza sativa Indica Group]
gi|222613250|gb|EEE51382.1| hypothetical protein OsJ_32431 [Oryza sativa Japonica Group]
Length = 266
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 100/180 (55%), Gaps = 14/180 (7%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+PRW R M L+YA S ++L ++ F+ A ++WA V P+ F E Y+ AD
Sbjct: 35 GRPRWNR-PDMRLTYAVSPLATADHLPRDAVREAFRSALARWAEVTPLRFAEAARYEEAD 93
Query: 117 IRIGFY------NGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV----DFGSEK 166
IR+GFY D G LAH+ P+ G+ HL AA WAV G +
Sbjct: 94 IRVGFYLHTADGKCDACGCVCKGGGEEALAHAHPPQDGRIHLHAARKWAVTNVAGAGGDA 153
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
P+AVDLESVAVHEIGH LGL HS + ++MY + KV L DD++GVQ LYG+ P
Sbjct: 154 PPLAVDLESVAVHEIGHALGLGHSSSESSMMYRHYR---GKVSLTDDDVKGVQELYGAKP 210
>gi|224097716|ref|XP_002311051.1| predicted protein [Populus trichocarpa]
gi|222850871|gb|EEE88418.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
FPG PRW+ L Y F + I++V K++F KWA V +F E +
Sbjct: 1 FPGAPRWSS---KHLKYTFGA--TVQVAGAESIRSVCKQSFQKWAQVTDFTFEEVPNSAD 55
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLE 174
ADI+I FY DHGD EPFDG G+ AH F P G H DA ETW+ + GS + +DLE
Sbjct: 56 ADIKIAFYQLDHGDDEPFDGPGGIFAHGFRPTIGMLHFDADETWSSNPGS----LELDLE 111
Query: 175 SVAVHEIGHLLGLTHSPVK-EAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
SVAVHEIGHL L HS +A+MYP K L DDI+G++ LYG
Sbjct: 112 SVAVHEIGHLPELGHSGDHPDAIMYPYFDYGKTKRSLQEDDIEGIRDLYG 161
>gi|225452582|ref|XP_002275556.1| PREDICTED: metalloendoproteinase 1-like [Vitis vinifera]
Length = 315
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 100/173 (57%), Gaps = 16/173 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV--FKRAFSKWASVIPVSFIET 109
Y F G PRW L+YAF L T A+ RAF +W S +F
Sbjct: 155 YSFFSGSPRWPP-SKTYLTYAF--------LPGTPSWAMSPVSRAFGQWDSATHFTFGSI 205
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
D+ AD+ I F+ DHGDG PFDG G +AH+F+P +G+FH D ETW++ P
Sbjct: 206 QDHTSADMTISFHRLDHGDGYPFDGPGGTIAHAFAPTNGRFHYDGDETWSIG----AVPN 261
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
A+DLE+VA+HEIGHLLGL HS V+ A+M+P++ K L DDIQG+ ALY
Sbjct: 262 AMDLETVALHEIGHLLGLGHSSVQNAIMFPSISSGVTK-GLHEDDIQGISALY 313
>gi|224152388|ref|XP_002337229.1| predicted protein [Populus trichocarpa]
gi|222838523|gb|EEE76888.1| predicted protein [Populus trichocarpa]
Length = 169
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
+++V +AF WA V +F E ADI I FY+GDHGD +PFDG LAH F P+
Sbjct: 35 LRSVCSKAFQTWAKVSKFTFQEATAGASADIVIEFYSGDHGDQDPFDGPGKQLAHGFFPQ 94
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK-EAVMYPTLKPRD 205
G+ H DA E W+ D +++ DLESV VHEIGHLLGL HS EA+MYPT+ P
Sbjct: 95 DGRLHYDADENWSTDPAMDQT----DLESVTVHEIGHLLGLYHSKDHPEAIMYPTIAPGK 150
Query: 206 KKVDLALDDIQGVQALY 222
KK DLA DDI G+ ALY
Sbjct: 151 KKRDLAQDDIDGIHALY 167
>gi|118485900|gb|ABK94796.1| unknown [Populus trichocarpa]
Length = 309
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
+++V +AF WA V +F E ADI I FY+GDHGD PFDG LAH+F P+
Sbjct: 175 LRSVCSKAFQTWAKVSKFTFQEATAGASADIVIEFYSGDHGDRYPFDGPGKTLAHAFYPQ 234
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK-EAVMYPTLKPRD 205
G+ H DA E W+ D +++ DLESV VHEIGHLLGL HS EA+MYPT++
Sbjct: 235 DGRLHYDADENWSTDPAMDQT----DLESVTVHEIGHLLGLHHSTDHPEAIMYPTIEAGK 290
Query: 206 KKVDLALDDIQGVQALYGS 224
KK DLA DDI G+ ALY +
Sbjct: 291 KKRDLAQDDIDGIHALYSN 309
>gi|224146279|ref|XP_002325947.1| predicted protein [Populus trichocarpa]
gi|222862822|gb|EEF00329.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 46 TRHKKDYVLFP---GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
++HKK +V+ G +W P + + + + + +++V +AF WA V
Sbjct: 133 SKHKKVHVVAHYAFGAQKWP---PSKYALTYRFGSGVQVVGSDTLRSVCSKAFQTWAKVS 189
Query: 103 PVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDF 162
+F E ADI I F++GDHGD PFDG LAH+F P+ G+ H DA E W+ D
Sbjct: 190 KFTFREATGGASADIVIEFFSGDHGDQSPFDGPGNQLAHAFYPQDGRLHYDADENWSTDP 249
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVK-EAVMYPTLKPRDKKVDLALDDIQGVQAL 221
++ +DLE+V VHEIGHLLGL HS EA+MYPT + KK DLA DDI G+ AL
Sbjct: 250 AMDQ----IDLETVTVHEIGHLLGLYHSKDHPEAIMYPTTQRGSKKRDLAQDDIDGIHAL 305
Query: 222 YGS 224
Y +
Sbjct: 306 YSN 308
>gi|296087729|emb|CBI34985.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 102/202 (50%), Gaps = 33/202 (16%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMIN 80
P+C A +S ++ P++ Y PG P W
Sbjct: 92 PRCGAADIINGTNWMRSPRWPPSKTYL---TYAFLPGTPSWAM----------------- 131
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
+ RAF +W S +F D+ AD+ I F+ DHGDG PFDG G +A
Sbjct: 132 --------SPVSRAFGQWDSATHFTFGSIQDHTSADMTISFHRLDHGDGYPFDGPGGTIA 183
Query: 141 HSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
H+F+P +G+FH D ETW++ P A+DLE+VA+HEIGHLLGL HS V+ A+M+P+
Sbjct: 184 HAFAPTNGRFHYDGDETWSIG----AVPNAMDLETVALHEIGHLLGLGHSSVQNAIMFPS 239
Query: 201 LKPRDKKVDLALDDIQGVQALY 222
+ K L DDIQG+ ALY
Sbjct: 240 ISSGVTK-GLHEDDIQGISALY 260
>gi|224097714|ref|XP_002311050.1| predicted protein [Populus trichocarpa]
gi|222850870|gb|EEE88417.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y P PRWT+ L+Y F + + +I+++ +AF +WA V +F E
Sbjct: 141 YNFIPENPRWTK---RQLTYKF--RSSVQVPAAQNIRSICAKAFQRWAQVTEFTFQEVSV 195
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVA 170
ADI IGF+ DH DG FDG G LAH+ P + FH DA E W+ + G P
Sbjct: 196 SSPADIVIGFHRRDHNDGSAFDGPGGTLAHATPPVRNAMFHFDADENWSENPG----PNQ 251
Query: 171 VDLESVAVHEIGHLLGLTHS--PVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+DLESVAVHEIGHLLGL H+ P +A+M + K DL DD+QGV+ALYG
Sbjct: 252 MDLESVAVHEIGHLLGLDHNDDPNADAIMSSGIPSGIAKRDLRADDVQGVRALYG 306
>gi|449531701|ref|XP_004172824.1| PREDICTED: LOW QUALITY PROTEIN: metalloendoproteinase 1-like
[Cucumis sativus]
Length = 320
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 21 PQCIA--VRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKEN 77
P+C V K K + + + HK + F G +W + LSY F
Sbjct: 126 PRCGVQDVIKNXKTKKRNQNFTNNGHTHFHKVSHFTFFEGNLKWPS-SKLHLSYGF---- 180
Query: 78 MINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLG 137
+ NY I IK V RAFSKW+ F DY ADI+I F G+HGD PFDGV G
Sbjct: 181 LPNYP-IDAIKPV-SRAFSKWSLNTHFKFSHVADYRKADIKISFERGEHGDNAPFDGVGG 238
Query: 138 VLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
VLAH+++P G+ H D + W+V S D+E+VA+HEIGH+LGL HS ++EA+M
Sbjct: 239 VLAHAYAPTDGRLHFDGDDAWSVGAISG----YFDVETVALHEIGHILGLQHSTIEEAIM 294
Query: 198 YPTLKPRDKKVDLALDDIQGVQALY 222
+P++ P L DDI G++ALY
Sbjct: 295 FPSI-PEGVTKGLHGDDIAGIKALY 318
>gi|449449178|ref|XP_004142342.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
gi|7159629|emb|CAB76364.1| matrix metalloproteinase [Cucumis sativus]
Length = 320
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 21 PQCIA--VRSTPKFKLKQSDKYDPAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKEN 77
P+C V K K + + + HK + F G +W + LSY F
Sbjct: 126 PRCGVQDVIKNKKTKKRNQNFTNNGHTHFHKVSHFTFFEGNLKWPS-SKLHLSYGF---- 180
Query: 78 MINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLG 137
+ NY I IK V RAFSKW+ F DY ADI+I F G+HGD PFDGV G
Sbjct: 181 LPNYP-IDAIKPV-SRAFSKWSLNTHFKFSHVADYRKADIKISFERGEHGDNAPFDGVGG 238
Query: 138 VLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
VLAH+++P G+ H D + W+V S D+E+VA+HEIGH+LGL HS ++EA+M
Sbjct: 239 VLAHAYAPTDGRLHFDGDDAWSVGAISG----YFDVETVALHEIGHILGLQHSTIEEAIM 294
Query: 198 YPTLKPRDKKVDLALDDIQGVQALY 222
+P++ P L DDI G++ALY
Sbjct: 295 FPSI-PEGVTKGLHGDDIAGIKALY 318
>gi|449449409|ref|XP_004142457.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
gi|449527361|ref|XP_004170680.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 313
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 16/173 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV--FKRAFSKWASVIPVSFIET 109
+ F G RW L+Y F L T +A+ RAF+ WA+ SF +
Sbjct: 152 FAFFEGNLRWPD-SKSHLTYGF--------LPGTPSEAISPVNRAFTTWAANTHFSFSQE 202
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
Y+ ADI+I F GDHGDG PFD V GVLAH+F+P G+ H DA E WA P
Sbjct: 203 SKYENADIKISFEKGDHGDGFPFDSVGGVLAHAFAPTDGRLHFDAVEHWA----DGAVPK 258
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+ D+E+VA+HEIGHLLGL HS V+ A+M+P++ K L DDI+G++ LY
Sbjct: 259 SYDMETVALHEIGHLLGLHHSSVEGAIMWPSIMGGATK-GLHADDIEGIKVLY 310
>gi|426370246|ref|XP_004052079.1| PREDICTED: matrix metalloproteinase-20 [Gorilla gorilla gorilla]
Length = 483
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ + L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYRFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 AF 276
>gi|123090|sp|P22757.1|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=Hatching enzyme 18
kDa form; Flags: Precursor
gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 61 WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIG 120
W+R+ P+T S+ + + L+ D+K +RAF W V +SF E D DIRI
Sbjct: 174 WSRNQPVTYSFG----ALTSDLNQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIK 229
Query: 121 FYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
F + DHGDG FDG GVLAH+F P +G H D +ETW +E + +L VA HE
Sbjct: 230 FGSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETW-----TEGTRSGTNLFQVAAHE 284
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
GH LGL HS V+ A+MYP + L DDI G+++LYGSN
Sbjct: 285 FGHSLGLYHSTVRSALMYPYYQGYVPNFRLDNDDIAGIRSLYGSN 329
>gi|344287821|ref|XP_003415650.1| PREDICTED: matrix metalloproteinase-20-like [Loxodonta africana]
Length = 483
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + + D+ + A W+S IP+SF++ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTSSMSSADVDKAIEMALQAWSSAIPLSFVKLN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 TGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K + L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQHPYGFRLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 TF 276
>gi|402895054|ref|XP_003910650.1| PREDICTED: neutrophil collagenase isoform 2 [Papio anubis]
Length = 444
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
++L PG P+W R L+Y ++NY L TD++ K+AF W+ P++F
Sbjct: 76 FMLTPGNPKWER---TNLTY-----RILNYTPQLSETDVEGAIKKAFEVWSKASPLTFTR 127
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
ADI IGF+ DHGD PFDG G+LAH+F P G H DA ETW DF
Sbjct: 128 ISQGQ-ADINIGFFQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTKDF--- 183
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG- 223
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 184 ---TNYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDINGIQAIYGP 240
Query: 224 -SNPNFTIGSLVESDISTNLAVD 245
SNP G L D
Sbjct: 241 SSNPIQPTGPSTPKSCDPRLTFD 263
>gi|402895048|ref|XP_003910647.1| PREDICTED: matrix metalloproteinase-20 [Papio anubis]
Length = 483
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + +++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKNI---LTYRVSK--YTTSMSSAEVEKAVQMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|302564017|ref|NP_001181006.1| matrix metalloproteinase-25 precursor [Macaca mulatta]
gi|355566058|gb|EHH22487.1| hypothetical protein EGK_05765 [Macaca mulatta]
Length = 483
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + +++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKNI---LTYRVSK--YTTSMSSAEVEKAVQMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|355752575|gb|EHH56695.1| hypothetical protein EGM_06158 [Macaca fascicularis]
Length = 483
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + +++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKNI---LTYRVSK--YTTSMSSAEVEKAVQMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|402895052|ref|XP_003910649.1| PREDICTED: neutrophil collagenase isoform 1 [Papio anubis]
Length = 467
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
++L PG P+W R L+Y ++NY L TD++ K+AF W+ P++F
Sbjct: 99 FMLTPGNPKWER---TNLTY-----RILNYTPQLSETDVEGAIKKAFEVWSKASPLTFTR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
ADI IGF+ DHGD PFDG G+LAH+F P G H DA ETW DF
Sbjct: 151 ISQGQ-ADINIGFFQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTKDF--- 206
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG- 223
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 207 ---TNYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDINGIQAIYGP 263
Query: 224 -SNPNFTIGSLVESDISTNLAVD 245
SNP G L D
Sbjct: 264 SSNPIQPTGPSTPKSCDPRLTFD 286
>gi|444724335|gb|ELW64942.1| Matrix metalloproteinase-20 [Tupaia chinensis]
Length = 583
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 99/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + D+ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSADVDKAVEMALQAWSSAVPLSFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPTALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 TF 276
>gi|149716842|ref|XP_001498886.1| PREDICTED: neutrophil collagenase [Equus caballus]
Length = 471
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY----LHITDIKAVFKRAFSKWASVIPVSF 106
++++ PG P+W R+ L+Y +INY L D++ F+RAF +W+ + F
Sbjct: 101 EFMITPGNPKWERN---NLTY-----RIINYTPHLLLRADVERAFERAFEEWSIASSLKF 152
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFG 163
+ + ADIRI FY GDHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 153 KKISQGE-ADIRIAFYQGDHGDNSPFDGPNGILAHAFQPGPGIGGDAHFDAEETWT---- 207
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD-LALDDIQGVQALY 222
+ +L VA HE GH LGL HS A+MYPT RD L+ DDI G+QA+Y
Sbjct: 208 --DNRTNYNLLIVAAHEFGHSLGLAHSTNPAALMYPTYAFRDPSTYLLSQDDINGIQAIY 265
Query: 223 G--SNPNFTIGSLVESDISTNLAVD 245
G ++P GS + L D
Sbjct: 266 GPSNDPIQPTGSTAPTACDPRLTFD 290
>gi|149716438|ref|XP_001500102.1| PREDICTED: matrix metalloproteinase-20-like [Equus caballus]
Length = 483
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + D+ + A W+S +P++F+ D
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTTSMTPADVNKAVEMALQAWSSAVPLNFVRVD 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 162 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRR 274
Query: 227 NF 228
F
Sbjct: 275 AF 276
>gi|47522674|ref|NP_999070.1| matrix metalloproteinase-20 precursor [Sus scrofa]
gi|11386893|sp|P79287.1|MMP20_PIG RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|1800213|gb|AAB41396.1| matrix metalloproteinase [Sus scrofa]
Length = 483
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDKAMEMALQAWSSAVPLSFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NFT 229
FT
Sbjct: 275 TFT 277
>gi|224097710|ref|XP_002311049.1| predicted protein [Populus trichocarpa]
gi|222850869|gb|EEE88416.1| predicted protein [Populus trichocarpa]
Length = 157
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
PRW++ L Y F + I++V K++F KWA V +F E + ADI+
Sbjct: 1 PRWSK---KHLKYTFGA--TVQVAGAESIRSVCKQSFQKWAQVTDFTFEEVPNSADADIK 55
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAV 178
I FY DHGD EPFDG G+ AH F P G H DA ETW+ + G ++ +DLESVAV
Sbjct: 56 IAFYQLDHGDDEPFDGPGGIFAHGFRPTIGMLHFDADETWSSNPGRQE----LDLESVAV 111
Query: 179 HEIGHLLGLTHSPVK-EAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
HEIGHL L HS +A+MYP K L DDI+G++ LYG
Sbjct: 112 HEIGHLPELGHSEDHPDAIMYPYFDYGKTKRSLQEDDIEGIRDLYG 157
>gi|255552738|ref|XP_002517412.1| Matrix metalloproteinase, putative [Ricinus communis]
gi|223543423|gb|EEF44954.1| Matrix metalloproteinase, putative [Ricinus communis]
Length = 321
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 97/171 (56%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F G P+W L+Y+F + + V AF WA+ SF T D
Sbjct: 160 YSFFSGNPKWPP-SKYHLTYSF-----LPGFPTAAVNPV-ANAFETWAANTHFSFSWTRD 212
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y +DI I FY GDHGDG PFDG G LAH+F+P++G FH DA E W++ A
Sbjct: 213 YINSDILISFYRGDHGDGHPFDGPGGTLAHAFAPQNGLFHYDADERWSIG----AVLGAY 268
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DLE+ A+HEIGHLLGL HS V+ A+MYP + + + L DD++G++ LY
Sbjct: 269 DLETTALHEIGHLLGLGHSSVEGAIMYPQIFAGETR-GLHSDDLEGIRTLY 318
>gi|297690058|ref|XP_002822444.1| PREDICTED: matrix metalloproteinase-20 [Pongo abelii]
Length = 483
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 AF 276
>gi|355566056|gb|EHH22485.1| hypothetical protein EGK_05763 [Macaca mulatta]
Length = 467
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D++L PG P+W R L+Y+ ++NY L TD++ K+AF W+ P++F
Sbjct: 98 DFMLTPGNPKWER---TNLTYS-----ILNYTPQLSETDVEGAIKKAFEVWSKASPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
ADI I F+ DHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 150 RISQGQ-ADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
K+ +L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 204 -KTSTNYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDINGIQAIYG 262
Query: 224 --SNPNFTIGSLVESDISTNLAVD 245
SNP G L D
Sbjct: 263 PSSNPIQPTGPTTPKSCDPRLTFD 286
>gi|355752577|gb|EHH56697.1| hypothetical protein EGM_06160 [Macaca fascicularis]
Length = 467
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D++L PG P+W R L+Y+ ++NY L TD++ K+AF W+ P++F
Sbjct: 98 DFMLTPGNPKWER---TNLTYS-----ILNYTPQLSETDVEGAIKKAFEVWSKASPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
ADI I F+ DHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 150 RISQGQ-ADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
K+ +L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 204 -KNSTNYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDINGIQAIYG 262
Query: 224 --SNPNFTIGSLVESDISTNLAVD 245
SNP G L D
Sbjct: 263 PSSNPIQPTGPTTPKSCDPRLTFD 286
>gi|114640083|ref|XP_001153208.1| PREDICTED: matrix metalloproteinase-20 [Pan troglodytes]
Length = 483
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKNI---LTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 AF 276
>gi|397516424|ref|XP_003828430.1| PREDICTED: matrix metalloproteinase-20 [Pan paniscus]
Length = 483
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKNI---LTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 AF 276
>gi|45359865|ref|NP_004762.2| matrix metalloproteinase-20 preproprotein [Homo sapiens]
gi|322510116|sp|O60882.3|MMP20_HUMAN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|157170228|gb|AAI52742.1| Matrix metallopeptidase 20 [synthetic construct]
gi|261857992|dbj|BAI45518.1| matrix metallopeptidase 20 [synthetic construct]
Length = 483
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 VF 276
>gi|50234983|gb|AAT70722.1| matrix metalloproteinase 20 (enamelysin) [Homo sapiens]
gi|119587428|gb|EAW67024.1| matrix metallopeptidase 20 (enamelysin) [Homo sapiens]
Length = 483
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 VF 276
>gi|147807819|emb|CAN73128.1| hypothetical protein VITISV_030256 [Vitis vinifera]
Length = 305
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 84/130 (64%), Gaps = 5/130 (3%)
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHL 152
RA +W S +F D+ AD+ I F+ DHGDG PFDG G +AH+F+P +G+FH
Sbjct: 179 RAXXQWDSATHFTFGXIQDHTSADMTISFHRLDHGDGXPFDGPGGTIAHAFAPTNGRFHY 238
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
D ETW++ P A+DLE+VAVHEIGHLLGL HS V+ A+M+P++ K L
Sbjct: 239 DGDETWSIG----AVPNAMDLETVAVHEIGHLLGLGHSSVQNAIMFPSISSGVTK-GLHE 293
Query: 213 DDIQGVQALY 222
DDIQG+ ALY
Sbjct: 294 DDIQGIXALY 303
>gi|297269064|ref|XP_001098000.2| PREDICTED: neutrophil collagenase [Macaca mulatta]
Length = 467
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D++L PG P+W R L+Y+ ++NY L TD++ K+AF W+ P++F
Sbjct: 98 DFMLTPGNPKWER---TNLTYS-----ILNYTPQLSETDVEGAIKKAFEVWSKASPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
ADI I F+ DHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 150 RISQGQ-ADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
K+ +L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 204 -KTSTNYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDINGIQAIYG 262
Query: 224 --SNPNFTIGSLVESDISTNLAVD 245
SNP G L D
Sbjct: 263 PSSNPIQPTGPSTPKSCDPRLTFD 286
>gi|297849710|ref|XP_002892736.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338578|gb|EFH68995.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 187
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 90/155 (58%), Gaps = 21/155 (13%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R K Y FPGKPRW + L+YAF +N + D+K V P++F
Sbjct: 36 RTTKWYSFFPGKPRWPKR-KRDLTYAFVPQNNLT----DDVK-----------RVTPLNF 79
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEK 166
++ ADI IGF++G+HGDGEPFDG +G LAH+ SP +G HLD E W + G
Sbjct: 80 TRSESLLGADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEIS 139
Query: 167 SPV-----AVDLESVAVHEIGHLLGLTHSPVKEAV 196
V VDLESVAVHEIGHLLGL HS V++A+
Sbjct: 140 RRVLPVTSVVDLESVAVHEIGHLLGLGHSSVEDAI 174
>gi|431916538|gb|ELK16516.1| Matrix metalloproteinase-20 [Pteropus alecto]
Length = 483
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + + D+ + A W+S +P++F+ +
Sbjct: 107 NYRLFPGEPKWKKNI---LTYRISK--YTSSMTSADVDKAIEMALRAWSSAVPLNFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM------G 214
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 215 KNGFNLFTVAAHEFGHALGLAHSTDSSALMYPTYKYQNPYGFRLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 TF 276
>gi|395814624|ref|XP_003780845.1| PREDICTED: matrix metalloproteinase-20 [Otolemur garnettii]
Length = 483
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P++F+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSAEVDTAIEMALRAWSSAVPLNFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 TGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTLGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L +DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPMDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|38343928|emb|CAE54592.1| putative hatching enzyme [Sphaerechinus granularis]
Length = 419
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 61 WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIG 120
WTR+ P+T S+ + N L+ IK +RAF W V ++F E D DIRI
Sbjct: 50 WTRNEPVTYSFG----ALSNDLNRDAIKNEMRRAFQVWDEVSGLTFREEADSPSVDIRIK 105
Query: 121 FYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
F + DHGDG FDG GVLAH+F P +G H D +ETW + + +L VA HE
Sbjct: 106 FGSFDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTI-----GTYSGTNLFQVAAHE 160
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
GH LGL HS V+ A+MYP + + L DDI G+++LYG N
Sbjct: 161 FGHSLGLYHSDVQSALMYPYYRGYNPNFSLDSDDIAGIRSLYGGN 205
>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
Length = 587
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 61 WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIG 120
W+R+ P+T S+ + + L+ D K +RAF W V +SF E D DIRI
Sbjct: 174 WSRNQPVTYSFG----ALTSDLNQNDAKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIK 229
Query: 121 FYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
F + DHGDG FDG GVLAH+F P +G H D +ETW + S +L VA HE
Sbjct: 230 FGSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETWTIGTRS-----GTNLFQVAAHE 284
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
GH LGL HS V+ A+MYP + L DDI G+++LYGSN
Sbjct: 285 FGHSLGLYHSTVRSALMYPYYQGYVPNFRLDSDDIAGIRSLYGSN 329
>gi|332208022|ref|XP_003253094.1| PREDICTED: matrix metalloproteinase-20 [Nomascus leucogenys]
Length = 483
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 99/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSPVEVDKAVEMALQAWSSAAPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|348574125|ref|XP_003472841.1| PREDICTED: neutrophil collagenase-like [Cavia porcellus]
Length = 468
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y++ PG P+W +H +T ++NY L D++ ++AF W+ P++F
Sbjct: 101 EYMMTPGNPKW-KHTSLTYR-------IVNYTPQLFQADVETAIEKAFQVWSGASPLTFT 152
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
T + + ADI IGF++ DHGD PFDG G+LAH+F P G H DA E W V
Sbjct: 153 RTTEKE-ADINIGFFHRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEEIWTV---- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
S +L VA HE GH LGL+HS A+MYP D L DDI G+QA+YG
Sbjct: 208 --SSKGYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAFSDPNTYSLPQDDINGIQAIYG 265
Query: 224 SNPNFTIGSLVESDISTNLAVDLRI 248
+ N + + ST A D R+
Sbjct: 266 PSNN----PIQPTGPSTPTACDPRL 286
>gi|73955232|ref|XP_854639.1| PREDICTED: matrix metalloproteinase-20 [Canis lupus familiaris]
Length = 483
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + + ++ + A W S +P+SFI +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTSSMSPAEVDKAVEMALQAWGSAVPLSFIRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K + L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQHPYGFHLPKDDVKGIQALYG 271
>gi|354467451|ref|XP_003496183.1| PREDICTED: matrix metalloproteinase-20 [Cricetulus griseus]
Length = 482
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + + ++ + A W++ +P++F+ +
Sbjct: 106 NYRLFPGEPKWKKNI---LTYRVSK--YTSSMSPAEVDKAVEMALRAWSTAVPLNFVRIN 160
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 161 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 215
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ + L DD++G+QALYG
Sbjct: 216 --GFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPSRFHLPKDDVKGIQALYGPRK 273
Query: 227 NF 228
F
Sbjct: 274 TF 275
>gi|351709963|gb|EHB12882.1| Matrix metalloproteinase-20 [Heterocephalus glaber]
Length = 483
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + + ++ + A W+S +P++F+ +
Sbjct: 107 NYRLFPGEPKWEKN---TLTYRISK--YASSMSPAEVDRAIQMALQAWSSAVPLNFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI + F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMVSFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTLGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFRLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|115700136|ref|XP_001176086.1| PREDICTED: 50 kDa hatching enzyme-like [Strongylocentrotus
purpuratus]
Length = 595
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G W R+V +T S+ + N L+ IK +RAF W V ++F E D D
Sbjct: 173 GGIAWPRNVAVTYSFG----TLTNDLNQNAIKNELRRAFQVWVDVSGLTFREVVDSSSVD 228
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPVAVDLE 174
IRI F + +HGDG FDG GVLAH+F P +G H D +E+W + +FG+ +L
Sbjct: 229 IRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSESWTIGTNFGT-------NLF 281
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
VA HE GH LGL HS V+ A+MYP + + +L DDI G+ +LYG N
Sbjct: 282 QVAAHEFGHSLGLYHSDVQAALMYPYYRGYNPNFNLDRDDIAGITSLYGRN 332
>gi|3005946|emb|CAA73317.1| enamelysin [Homo sapiens]
Length = 483
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D E W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNPEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYG 271
>gi|410971805|ref|XP_003992353.1| PREDICTED: matrix metalloproteinase-20 [Felis catus]
Length = 483
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + D+ + A W S +P++F+
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMAAADVDKAVEMALQAWGSAVPLTFVRVT 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F +GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFESGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K + L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQHPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 TF 276
>gi|336595359|ref|NP_001229632.1| hatching enzyme precursor [Strongylocentrotus purpuratus]
Length = 598
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 95/171 (55%), Gaps = 13/171 (7%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G W R+V +T S+ + N L+ IK +RAF W V ++F E D D
Sbjct: 176 GGIAWPRNVAVTYSFG----TLTNDLNQNAIKNEIRRAFQVWDDVSGLTFREVVDSSSVD 231
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV--DFGSEKSPVAVDLE 174
IRI F + +HGDG FDG GVLAH+F P +G H D +ETW + +FG+ +L
Sbjct: 232 IRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSETWTIGTNFGT-------NLF 284
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
VA HE GH LGL HS V+ A+MYP + + +L DDI G+ +LYG N
Sbjct: 285 QVAAHEFGHSLGLYHSDVQAALMYPYYRGYNPNFNLDRDDIAGITSLYGRN 335
>gi|426245554|ref|XP_004016575.1| PREDICTED: neutrophil collagenase [Ovis aries]
Length = 470
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 101/199 (50%), Gaps = 24/199 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG P+W L+Y ++NY L TD++A+ + F W+ V P++F T D
Sbjct: 106 PGNPKWEN---TKLTY-----RIVNYTPNLTKTDVEALIETGFKVWSDVSPLTFNRTSDK 157
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
+ ADI+I F DHGD PFDG G+LAH+F P G H DA ETW K+
Sbjct: 158 E-ADIQISFAQKDHGDNSPFDGPNGILAHAFQPGPGIGGDVHFDAEETWT------KTSE 210
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SNP 226
+L SVA HE GH LGL HS A+MYP RD L DDI G+QA+YG SNP
Sbjct: 211 NYNLFSVAAHEFGHSLGLAHSSDPGALMYPIYTFRDPSSYSLHQDDINGIQAIYGPSSNP 270
Query: 227 NFTIGSLVESDISTNLAVD 245
G + L D
Sbjct: 271 VQPTGPTTPTACDPRLTFD 289
>gi|3183022|sp|P91953.1|HE_HEMPU RecName: Full=50 kDa hatching enzyme; Short=HE; Short=HEZ; AltName:
Full=Envelysin; AltName: Full=Sea-urchin-hatching
proteinase; Contains: RecName: Full=38 kDa hatching
enzyme; Contains: RecName: Full=32 kDa hatching enzyme
non-specific; Contains: RecName: Full=15 kDa peptide;
Flags: Precursor
gi|1816431|dbj|BAA19171.1| hatching enzyme [Hemicentrotus pulcherrimus]
Length = 591
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G W R+V +T S+ + N L T IK +RAF W V ++F E D D
Sbjct: 173 GGIAWPRNVAVTYSFG----TLSNDLSQTAIKNELRRAFQVWDDVSSLTFREVVDSSSVD 228
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESV 176
IRI F + +HGDG FDG GVLAH+F P +G H D +E W + S +L V
Sbjct: 229 IRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSERWTIGTNS-----GTNLFQV 283
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
A HE GH LGL HS V+ A+MYP + + +L DDI G+ +LYG N
Sbjct: 284 AAHEFGHSLGLYHSDVQSALMYPYYRGYNPNFNLDRDDIAGITSLYGRN 332
>gi|426244423|ref|XP_004016022.1| PREDICTED: matrix metalloproteinase-20 [Ovis aries]
Length = 483
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
DY LFPG+P+W ++ TL+Y SK + ++ + A W+S +P++F+ +
Sbjct: 107 DYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDRAMEMALRAWSSAVPLNFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 162 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRR 274
Query: 227 NF 228
F
Sbjct: 275 AF 276
>gi|7305275|ref|NP_038931.1| matrix metalloproteinase-20 precursor [Mus musculus]
gi|12585270|sp|P57748.1|MMP20_MOUSE RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|6815255|gb|AAF28470.1|AF155933_1 matrix metalloproteinase-20 [Mus musculus]
gi|6815269|gb|AAF28472.1| matrix metalloproteinase-20 [Mus musculus]
gi|148692992|gb|EDL24939.1| matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|156229730|gb|AAI52336.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|156229732|gb|AAI52337.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
gi|182888447|gb|AAI60269.1| Matrix metallopeptidase 20 (enamelysin) [synthetic construct]
Length = 482
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + T++ + A W++ +P++F+ +
Sbjct: 106 NYRLFPGEPKWKKNI---LTYRISK--YTPSMSPTEVDKAIQMALHAWSTAVPLNFVRIN 160
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 161 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 215
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K ++ + L DD++G+QALYG
Sbjct: 216 --GFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFHLPKDDVKGIQALYG 270
>gi|348574091|ref|XP_003472824.1| PREDICTED: matrix metalloproteinase-20-like [Cavia porcellus]
Length = 483
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + +++ + A W+S +P++F+ +
Sbjct: 107 NYRLFPGEPKWEKN---TLTYRISK--YAASMSPAEVERAIEMALRAWSSAVPLNFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI + F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMVSFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTLGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFRLPKDDVKGIQALYG 271
>gi|311263813|ref|XP_003129864.1| PREDICTED: neutrophil collagenase [Sus scrofa]
Length = 468
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 108/212 (50%), Gaps = 24/212 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+W + TL+Y K L TD++++ +A W+ P+ FI T
Sbjct: 101 DFMLTPGNPKWKQ---TTLTYRIIK--YTQQLPKTDVESIIAKALQLWSQASPLKFISTS 155
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ + ADI+I F DHGD PFDG G+LAH+F P G H DA ETW K+
Sbjct: 156 EEE-ADIKIAFVQRDHGDNSPFDGPNGILAHAFQPGPGIGGDVHFDAEETWT------KT 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--S 224
+L VA HE GH LGL+HS A+MYP + L DDI G+QA+YG S
Sbjct: 209 SKNYNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAFSEPSTYSLPQDDINGIQAIYGPSS 268
Query: 225 NPNFTIGSLVESDISTNLAVDLRIKSSMWATM 256
NP G +T A D R+ AT+
Sbjct: 269 NPVQPTGP------TTPRACDPRLTFDAIATL 294
>gi|357496121|ref|XP_003618349.1| Interstitial collagenase [Medicago truncatula]
gi|355493364|gb|AES74567.1| Interstitial collagenase [Medicago truncatula]
Length = 333
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 107/224 (47%), Gaps = 35/224 (15%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMIN 80
P+C V PK KQ+ Y F P+W+ L Y + ++ ++
Sbjct: 119 PRC-GVPDLPKHSHKQN-------GLEMSSSYAFFQDSPKWSD-TKRNLKYMY--KSSVD 167
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
L + ++ V + AF W+ V +F E D ADI+IGF+ G+HGD PFDG VLA
Sbjct: 168 VLSMDVVRKVCENAFLSWSEVSDFTFTEVGDEGSADIKIGFHRGNHGDVYPFDGPGNVLA 227
Query: 141 HSFSPESGKFHLDAAETWAVD--------------FGSEKSPV--------AVDLESVAV 178
H+F PE G+ H D E W + G E +P DLE+VA+
Sbjct: 228 HTFPPEDGRLHFDGDENWTNNPTSLEDNFGLHAGLLGKESNPFQRPTATTKQFDLETVAL 287
Query: 179 HEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
HE+GHLLGL HS + + MYP + +L DD+ G+ ALY
Sbjct: 288 HEMGHLLGLAHSTDQNSAMYPYWA--GVRRNLNQDDVDGITALY 329
>gi|440902966|gb|ELR53690.1| Matrix metalloproteinase-20 [Bos grunniens mutus]
Length = 483
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P++F+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDRAMEMALRAWSSAVPLNFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFRLPKDDVKGIQALYGPRR 274
Query: 227 NFT 229
F+
Sbjct: 275 AFS 277
>gi|351709965|gb|EHB12884.1| Neutrophil collagenase [Heterocephalus glaber]
Length = 470
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y++ PG P+W L+Y N L D++ ++AF W++ P++F T
Sbjct: 101 NYMMTPGNPKWKN---TDLTYRI--RNYTPQLFQADVETAIEKAFQTWSAASPLTFTRTT 155
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ + ADI I F DHGD PFDG G+LAH+F P G H DA ETW + S
Sbjct: 156 EGE-ADINIAFVQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTI------S 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+QA+YG +
Sbjct: 209 SKGYNLFLVAAHEFGHSLGLSHSSDPGALMYPNYAFREPSTYSLPQDDINGIQAIYGPSN 268
Query: 227 NFTIGSLVESDISTNLAVDLRI 248
N + + ST A D R+
Sbjct: 269 N----PIQPTGPSTPTACDPRL 286
>gi|359488869|ref|XP_003633836.1| PREDICTED: LOW QUALITY PROTEIN: metalloendoproteinase 1-like [Vitis
vinifera]
Length = 270
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FP PRW L + S + + AF WA V +
Sbjct: 110 FAFFPSNPRWLPGQTHLLYFLDSGSH-------PETAGAVANAFGAWAGVTNFTSSRLQI 162
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
A++ I F DHGDG PFDG G+LAH+F+ G+FH D E W + + A+
Sbjct: 163 QQXANLHISFXIRDHGDGSPFDGPFGILAHAFALTDGRFHFDCEENWVIGAVAH----AM 218
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DL++VA HEIGHLLGL H+PV+EAVMY + P K L DDI G++ALY
Sbjct: 219 DLQTVATHEIGHLLGLAHTPVQEAVMYAIISPGSTK-GLNQDDIDGIRALY 268
>gi|296480356|tpg|DAA22471.1| TPA: matrix metalloproteinase-20 precursor [Bos taurus]
Length = 481
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P++F+ +
Sbjct: 105 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDRAMEMALRAWSSAVPLNFVRIN 159
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 160 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 214
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 215 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFRLPKDDVKGIQALYGPRR 272
Query: 227 NFT 229
F+
Sbjct: 273 AFS 275
>gi|449492735|ref|XP_004159085.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 295
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 111/205 (54%), Gaps = 23/205 (11%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRW---TRHVPMTLSYAFSKEN 77
P+C VR KF ++ + D E + H Y LFPG P+W RH L+Y F+
Sbjct: 110 PRC-GVRDVFKFNSSKNLE-DDLEMSSH---YALFPGNPQWPDYKRH----LTYVFTNNF 160
Query: 78 MINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLG 137
I+++ A ++WA +F E D ADI I F DH DG PFDG G
Sbjct: 161 PIDFV------PSVTEAMARWAGQSLFTFSEASDAQSADINISFQIKDHADGLPFDGPGG 214
Query: 138 VLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
++ H+F+P G+ HLD ++W+ +K V++ + A+HE+GH+LGL HS + +AVM
Sbjct: 215 IVGHAFAPTDGRLHLDGDDSWSAGLEEKK----VNVMNAALHELGHVLGLAHSTLPQAVM 270
Query: 198 YPTLKPRDKKVDLALDDIQGVQALY 222
+P ++ K +L DDI G+ ALY
Sbjct: 271 WPYIESNALK-NLNDDDIAGLHALY 294
>gi|291383995|ref|XP_002708614.1| PREDICTED: matrix metalloproteinase 20 [Oryctolagus cuniculus]
Length = 483
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 102/182 (56%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y +K + + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRVAK--YTSSMTPFEVDKAIEMALRAWSSAVPLSFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 162 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPFGFRLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|449449427|ref|XP_004142466.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 306
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 13/172 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIK--AVFKRAFSKWASVIPVSFIET 109
++ FPGK +W + L+Y F +H +K A RAF KWA+ +F
Sbjct: 143 FMFFPGKGKWP-YRKWHLTYGF--------VHNYPMKHAAAVVRAFDKWAANSKFTFSLA 193
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
ADI + F GDHGDG+PFDG G+L H+F P G+ H DA E WA + GS +
Sbjct: 194 WRIQTADILLSFERGDHGDGKPFDGEGGILGHAFGPIDGRVHFDADEQWA-EIGSLTNE- 251
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
D ESVA+HEIGH LGL HS AVM+ ++ K +L +DDI+GV AL
Sbjct: 252 NFDFESVALHEIGHALGLGHSIFPSAVMWANMETGVNKTELTIDDIEGVHAL 303
>gi|449520888|ref|XP_004167464.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 306
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 96/172 (55%), Gaps = 13/172 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIK--AVFKRAFSKWASVIPVSFIET 109
++ FPGK +W + L+Y F +H +K A RAF KWA+ +F
Sbjct: 143 FMFFPGKGKWP-YRKWHLTYGF--------VHNYPMKHAAAVVRAFDKWAANSKFTFSLA 193
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
ADI + F GDHGDG+PFDG G+L H+F P G+ H DA E WA + GS +
Sbjct: 194 WRIQTADILLSFERGDHGDGKPFDGEGGILGHAFGPIDGRVHFDADEQWA-EIGSLTNE- 251
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
D ESVA+HEIGH LGL HS AVM+ ++ K +L +DDI+GV AL
Sbjct: 252 NFDFESVALHEIGHALGLGHSIFPSAVMWANMETGVNKTELTIDDIEGVHAL 303
>gi|410971807|ref|XP_003992354.1| PREDICTED: neutrophil collagenase [Felis catus]
Length = 468
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 107/210 (50%), Gaps = 20/210 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D+++ PG PRW +H L+Y K L T ++ V AF WA+ ++F +
Sbjct: 101 DFMVTPGNPRW-KHT--NLTYRILK--YTTQLSQTKVETVISTAFQVWANASSLTFTKIS 155
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I FY GDHGD PFDG G+LAH+F P G H D ETW +F +
Sbjct: 156 QGE-ADINIAFYEGDHGDNSPFDGPNGILAHAFQPGPGIGGDAHFDEQETWTTNFEN--- 211
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+QA+YG +
Sbjct: 212 ---YNLFLVAAHEFGHSLGLSHSTDPVALMYPIYAFREPSTYTLPQDDINGIQAIYGPSS 268
Query: 227 NFTIGSLVESDISTNLAVDLRIKSSMWATM 256
N + + ST A D R+ AT+
Sbjct: 269 N----PVQPTGPSTPTACDPRLTFDAIATL 294
>gi|403262939|ref|XP_003923822.1| PREDICTED: matrix metalloproteinase-20 [Saimiri boliviensis
boliviensis]
Length = 483
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W + TL+Y SK + ++ A W+S +P++F+ +
Sbjct: 107 NYRLFPGEPKWKK---TTLTYRISK--YTPSMSPAEVDKAMGMALQAWSSAVPLNFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|301773284|ref|XP_002922058.1| PREDICTED: matrix metalloproteinase-20-like [Ailuropoda
melanoleuca]
gi|281341729|gb|EFB17313.1| hypothetical protein PANDA_011000 [Ailuropoda melanoleuca]
Length = 483
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 97/177 (54%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+ F+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDKAVEMALQAWSSAVPLGFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYG 271
>gi|355702812|gb|AES02056.1| matrix metallopeptidase 8 [Mustela putorius furo]
Length = 247
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D+++ PG P+W + L+Y K L D++ K+AF W++ P++F +T
Sbjct: 32 DFMVTPGNPKWEQ---TNLTYRIIK--YTTQLSEADVEESIKKAFQVWSNASPLTFTKTS 86
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI+I F GDHGD PFDG G+LAH+F P G H D E W ++ S
Sbjct: 87 QGE-ADIKITFVQGDHGDNSPFDGPNGILAHAFQPGQGVGGDAHFDEDEIWTMNSSS--- 142
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP RD L DDI G+QA+YG +
Sbjct: 143 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAFRDPSTYTLPQDDINGIQAIYGPSN 199
Query: 227 NFTIGSLVESDISTNLAVDLRI 248
N + + ST A D R+
Sbjct: 200 N----PIQPTGPSTPTACDPRL 217
>gi|157817855|ref|NP_001100270.1| matrix metalloproteinase-20 precursor [Rattus norvegicus]
gi|149020723|gb|EDL78528.1| matrix metalloproteinase 20 (enamelysin) (predicted) [Rattus
norvegicus]
Length = 482
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + T++ A W++ +P+ F+ +
Sbjct: 106 NYRLFPGEPKWKKNI---LTYRVSK--YTPSMSPTEVDKAVHMALHAWSTAVPLIFVRIN 160
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 161 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 215
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ + L DD++G+QALYG
Sbjct: 216 --GFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFHLPKDDVKGIQALYGPRK 273
Query: 227 NF 228
F
Sbjct: 274 TF 275
>gi|331284141|ref|NP_001193569.1| macrophage metalloelastase precursor [Bos taurus]
gi|296480368|tpg|DAA22483.1| TPA: matrix metallopeptidase 12-like [Bos taurus]
Length = 471
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 25/236 (10%)
Query: 17 IHESPQCIAVRSTPKFKLKQSDK-YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSK 75
I E Q ++ T + D + P K++ +FPG+P W + + ++Y +
Sbjct: 65 IQEMQQFFGLKVTGQLDTSTLDMMHRPRCGVPDVKNFQVFPGRPAWKKRL---ITYRIN- 120
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
N L D+ F++AF W+ V P+ F + D + ADI I F +HGD FDG
Sbjct: 121 -NYTPDLKPEDVDDAFQKAFQVWSDVTPLKFRKVHDNE-ADIMIRFAFREHGDAYSFDGP 178
Query: 136 LGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
G+LAH+F+P + G H D AETW K P +L VAVHEIGH LGL HS
Sbjct: 179 WGILAHAFAPGAGLGGDAHFDEAETWT---KGHKGP---NLFLVAVHEIGHSLGLDHSSD 232
Query: 193 KEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--------SNPNFTIGSLVESDIS 239
A+M+P+ + D ++ L+ DDI+G+Q+LYG SNP+ T + + ++S
Sbjct: 233 TRAIMFPSYRDVDYRRFRLSTDDIRGIQSLYGRPDKHQVPSNPDNTNPAACDPNMS 288
>gi|440902964|gb|ELR53688.1| Neutrophil collagenase [Bos grunniens mutus]
Length = 470
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 102/199 (51%), Gaps = 24/199 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG P+W + L+Y+ ++NY L TD++A+ + AF W+ V P++F T D
Sbjct: 106 PGNPKWEK---TKLTYS-----IVNYTQNLTETDVEAIIEEAFKVWSKVSPLTFNRTLDK 157
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
+ ADI+I F DHGD PFDG G+LAH+F P G H DA ETW K+
Sbjct: 158 E-ADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGGDVHFDAEETWT------KTSE 210
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SNP 226
+L VA HE GH LGL HS A+MYP D L DDI G+QA+YG SNP
Sbjct: 211 NYNLFPVAAHEFGHSLGLAHSSDPGALMYPNYAFIDPSSYSLHQDDINGIQAIYGPSSNP 270
Query: 227 NFTIGSLVESDISTNLAVD 245
G + L D
Sbjct: 271 VQPTGPTTPTACDPRLTFD 289
>gi|27806003|ref|NP_776816.1| matrix metalloproteinase-20 precursor [Bos taurus]
gi|12585267|sp|O18767.1|MMP20_BOVIN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
Flags: Precursor
gi|2326212|gb|AAB66599.1| enamel metalloproteinase precursor [Bos taurus]
Length = 481
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P++F+ +
Sbjct: 105 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDRAMEMALRAWSSAVPLNFVRIN 159
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 160 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 214
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+M+PT K ++ L DD++G+QALYG
Sbjct: 215 --GFNLFTVAAHEFGHALGLAHSTDPSALMFPTYKYQNPYGFRLPKDDVKGIQALYGPRR 272
Query: 227 NFT 229
F+
Sbjct: 273 AFS 275
>gi|327269122|ref|XP_003219344.1| PREDICTED: matrix metalloproteinase-20-like [Anolis carolinensis]
Length = 484
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 97/179 (54%), Gaps = 16/179 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y K L ++ + W++ P++F++T
Sbjct: 105 NYRLFPGEPKWKKN---TLTYRVKK--YTPSLSHAEVDKAVEMGLKAWSAAAPLNFVKTT 159
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 160 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 214
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSN 225
+L +VA HE GH LGL HS A+MYPT K + L DD++G+QALYGS
Sbjct: 215 --GFNLFTVAAHEFGHALGLAHSADPSALMYPTYKYQHPFGFHLPKDDVKGIQALYGSR 271
>gi|440912886|gb|ELR62411.1| Macrophage metalloelastase, partial [Bos grunniens mutus]
Length = 474
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 122/236 (51%), Gaps = 25/236 (10%)
Query: 17 IHESPQCIAVRSTPKFKLKQSDK-YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSK 75
I E Q ++ T + D + P K++ +FPG+P W + + ++Y +
Sbjct: 69 IQEMQQFFGLKVTGQLDTSTLDMMHRPRCGVPDVKNFQVFPGRPAWKKRL---ITYRIN- 124
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
N L D+ F++AF W+ V P+ F + D + ADI I F +HGD FDG
Sbjct: 125 -NYTPDLKPEDVDDAFQKAFQVWSDVTPLKFRKVHDNE-ADIMIRFAFREHGDAYSFDGP 182
Query: 136 LGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
G+LAH+F+P + G H D AETW K P +L VAVHEIGH LGL HS
Sbjct: 183 WGILAHAFAPGAGLGGDAHFDEAETWT---KGHKGP---NLFLVAVHEIGHSLGLGHSSD 236
Query: 193 KEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--------SNPNFTIGSLVESDIS 239
A+M+P+ + D ++ L+ DDI G+Q+LYG SNP+ T + + ++S
Sbjct: 237 TRAIMFPSYRDVDYRRFRLSADDIHGIQSLYGRPDKHQVPSNPDNTNPAACDPNMS 292
>gi|301773288|ref|XP_002922069.1| PREDICTED: neutrophil collagenase-like [Ailuropoda melanoleuca]
Length = 475
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+W L+Y K L D++ K+AF W++ P++F +
Sbjct: 109 DFMLTPGNPKWKE---TNLTYRIIK--YTKQLSEADVETAIKKAFQVWSNASPLTFTKIS 163
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ DI+I F GDHGD PFDG G+LAH+F P G H DA ETW ++
Sbjct: 164 QGE-PDIKIAFVRGDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDADETWT------QN 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--S 224
+L VA HE GH LGL HS A+MYP RD L DDI G+Q +YG S
Sbjct: 217 SSNYNLFLVAAHEFGHSLGLAHSTDPGALMYPNYAFRDPSTYTLPQDDINGIQTIYGPSS 276
Query: 225 NPNFTIGSLVESDISTNLAVD 245
NP G + +L D
Sbjct: 277 NPIQPTGPTTPTACDPSLTFD 297
>gi|373428615|gb|AEY69042.1| matrix metalloproteinase [Thamnodynastes strigatus]
Length = 287
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 98/193 (50%), Gaps = 24/193 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y FPG+P W H +T ++NY L + I F RAF W++V P++F
Sbjct: 96 YTTFPGRPTWD-HTDLTY-------RVVNYSPDLDVASIDDAFTRAFGMWSNVAPLTFTR 147
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE----SGKFHLDAAETWAVDFGS 164
+ D DI IGF + +HGDG PFDG GVLAH+F+P SG H D E W G+
Sbjct: 148 QEQGDV-DILIGFGSQNHGDGYPFDGQYGVLAHAFAPGTNSISGDAHFDEDELWTQGGGN 206
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG- 223
L VA HE GH LGL HS ++ A+MYPT + L DD+ G+Q LYG
Sbjct: 207 -----GFSLFIVAAHEFGHSLGLDHSSIQGALMYPTYA-YQANLQLHSDDVAGIQDLYGQ 260
Query: 224 -SNPNFTIGSLVE 235
+ P G L
Sbjct: 261 RAGPQSDSGRLAR 273
>gi|449492739|ref|XP_004159086.1| PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus]
Length = 293
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 23/206 (11%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRW---TRHVPMTLSYAFSKE 76
P+C VR KF ++ + D E + H Y LFPG +W RH L+Y F+
Sbjct: 107 QPRC-GVRDVFKFNSSKNLE-DDLEMSSH---YALFPGNLKWPDYKRH----LTYVFTNN 157
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
IN++ A ++WA+ +F E D ADI I F DH DG PFDG
Sbjct: 158 FPINFV------PSVTEAMARWAAHSLFTFSEASDAQSADINISFQIKDHADGMPFDGPG 211
Query: 137 GVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAV 196
GV+ H+F+P G+ HLD ++W+ +K V++ + A+HE+GH+LGL HS + +AV
Sbjct: 212 GVVGHAFAPIDGRLHLDGDDSWSAGLEEKK----VNVMNAALHELGHVLGLAHSTLPQAV 267
Query: 197 MYPTLKPRDKKVDLALDDIQGVQALY 222
M+P ++ K ++ DDI G+ ALY
Sbjct: 268 MWPYIESNALK-NMNDDDIAGLHALY 292
>gi|449449413|ref|XP_004142459.1| PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus]
Length = 293
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 23/206 (11%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRW---TRHVPMTLSYAFSKE 76
P+C VR KF ++ + D E + H Y LFPG +W RH L+Y F+
Sbjct: 107 QPRC-GVRDVFKFNSSKNLE-DDLEMSSH---YALFPGNLKWPDYKRH----LTYVFTNN 157
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
IN++ A ++WA+ +F E D ADI I F DH DG PFDG
Sbjct: 158 FPINFV------PSVTEAMARWAAHSLFTFSEASDAQSADINISFQIKDHADGMPFDGPG 211
Query: 137 GVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAV 196
GV+ H+F+P G+ HLD ++W+ +K V++ + A+HE+GH+LGL HS + +AV
Sbjct: 212 GVVGHAFAPIDGRLHLDGDDSWSAGLEEKK----VNVMNAALHELGHVLGLAHSTLPQAV 267
Query: 197 MYPTLKPRDKKVDLALDDIQGVQALY 222
M+P + K +L DDI G+ ALY
Sbjct: 268 MWPYIDSNALK-NLNDDDIAGLHALY 292
>gi|426244419|ref|XP_004016020.1| PREDICTED: macrophage metalloelastase [Ovis aries]
Length = 470
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 112/202 (55%), Gaps = 24/202 (11%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
++Y LFPG+P W + + ++Y + N L D+ F++AF W+ V P+ F +
Sbjct: 99 ENYQLFPGRPVWKKRL---ITYRIN--NYTPDLKPEDVDDAFQKAFQVWSDVTPLKFRQI 153
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEK 166
+ + ADI I F +H D PFDG G+LAH+F+P + G H D AETW K
Sbjct: 154 HENE-ADIMIQFALREHRDAYPFDGPWGILAHAFAPGAGLGGDAHFDEAETWT---KGRK 209
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG-- 223
P +L VAVHEIGH LGL HS A+M+P+ + D K+ L+ DDI G+Q+LYG
Sbjct: 210 GP---NLFLVAVHEIGHSLGLGHSSDTSAIMFPSYRHIDYKIFRLSADDIHGIQSLYGRP 266
Query: 224 ------SNPNFTIGSLVESDIS 239
SNP+ T + + ++S
Sbjct: 267 EKHQVPSNPSNTNPAACDPNMS 288
>gi|117647501|gb|ABK51704.1| matrix metalloproteinase 20 [Caiman crocodilus apaporiensis]
Length = 437
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 101/195 (51%), Gaps = 16/195 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + L ++ + W++ P++F+ +
Sbjct: 58 NYRLFPGEPKWKKN---TLTYRVSK--YTSSLSHAEVDKAVEMGLKAWSNAAPLNFVRAN 112
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D+AE W +
Sbjct: 113 TGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDSAEKWTM------G 165
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K + L DDI+G+Q LYG
Sbjct: 166 TNGFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQSPFGFRLPKDDIKGIQKLYGPRK 225
Query: 227 NFTIGSLVESDISTN 241
+ G + TN
Sbjct: 226 SGAEGPKAPQNPPTN 240
>gi|345799783|ref|XP_546547.3| PREDICTED: neutrophil collagenase [Canis lupus familiaris]
Length = 476
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+W + L+Y K L +++ ++AF W++V P++F +
Sbjct: 109 DFMLTPGNPKWKQ---TNLTYRIIK--YTPQLSEANVETAIQKAFQVWSNVSPLTFTKVS 163
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ DIRI F GDHGD PFDG G+LAH+F P G H DA ETW ++
Sbjct: 164 QGE-VDIRISFVQGDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDAEETWT------EN 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--S 224
+L VA HE+GH LGL+HS A+MYP D L DDI G+Q +YG S
Sbjct: 217 SSNYNLFLVAAHEVGHSLGLSHSTDPGALMYPNYVFHDPSTYTLPQDDINGIQTIYGPSS 276
Query: 225 NPNFTIGSLVESDISTNLAVD 245
NP G + L D
Sbjct: 277 NPVQPTGPSTPTTCDPRLTFD 297
>gi|296216041|ref|XP_002754395.1| PREDICTED: matrix metalloproteinase-20 [Callithrix jacchus]
Length = 483
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ A W+ +P++F+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSPAEVDKAVGMALQAWSGAVPLNFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI + F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMVSFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT + ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYRYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 PF 276
>gi|395814628|ref|XP_003780847.1| PREDICTED: neutrophil collagenase [Otolemur garnettii]
Length = 465
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 95/179 (53%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
++L PG P+W L+Y F INY L TD++ V ++AF W+ P++F +
Sbjct: 99 FMLTPGSPKWEH---TNLTYRF-----INYTPQLSKTDVETVIEKAFEVWSKASPLTFTK 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
T + ADI+I F DHGD PFDG G+LAH+F P G H D ETW
Sbjct: 151 TAQGE-ADIKIAFVQKDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDEEETWTT----- 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+ + +L VA HE GH LGL+HS A+MYP + L DDI G+QA+YG
Sbjct: 205 -TSINYNLFLVAAHEFGHSLGLSHSSDPGALMYPNYAFNEPSTYSLPQDDINGIQAIYG 262
>gi|395743409|ref|XP_003777917.1| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase [Pongo
abelii]
Length = 465
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+++L PG P+W R L+Y N L D+K ++AF W+ P++F
Sbjct: 98 EFMLTPGNPKWER---TNLTYRI--RNYTPQLSEDDVKTAIEKAFEVWSKASPLTFTRIS 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW K+
Sbjct: 153 QGE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDVHFDAEETWT------KT 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--S 224
+L VA HE GH LGL HS A+MYP R+ L DDI G +LYG S
Sbjct: 206 SANYNLFIVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGHSSLYGPSS 265
Query: 225 NPNFTIGSLVESDISTNLAVD 245
NP G +L D
Sbjct: 266 NPVQPTGPSTPKPCDPSLTFD 286
>gi|449450183|ref|XP_004142843.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 295
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRW---TRHVPMTLSYAFSKENM 78
Q +R KF ++ + D E + H YVLFP +W RH L+Y F+
Sbjct: 110 QRCGIRDVFKFNSSKNLE-DDLEMSSH---YVLFPNNKKWPDYKRH----LTYMFTNNFP 161
Query: 79 INYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
I+++ A ++WA+ +F E D ADI I F DH DG PFDG GV
Sbjct: 162 IDFM------PSVTEAMARWAAQSLFTFSEASDAQSADINISFQIKDHADGLPFDGPGGV 215
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+ H+F+P G+ HLD +TW+ +K V++ + A+HE+GH+LGL HS + +AVM+
Sbjct: 216 VGHAFAPTDGRLHLDGDDTWSAGMEVQK----VNVMNAALHELGHVLGLAHSTLPQAVMW 271
Query: 199 PTLKPRDKKVDLALDDIQGVQALY 222
P + K +L DDI G+ ALY
Sbjct: 272 PYIDSNALK-NLNDDDIAGLHALY 294
>gi|403262933|ref|XP_003923819.1| PREDICTED: neutrophil collagenase [Saimiri boliviensis boliviensis]
Length = 465
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+++ PG P+W + L+Y F INY L +T+++ AF W+ P++F
Sbjct: 98 DFMITPGNPKWEQ---TNLTYRF-----INYTPQLSVTEVETAIGNAFKIWSDPSPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
+ ADI I F+ DHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 150 RISQGE-ADINIAFFPRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+ +L VA HE GH LGL+HS A+MYP R+ L DDI G+QA+YG
Sbjct: 204 -STSENYNLFLVAAHEFGHSLGLSHSSDPGALMYPNYAFREPSTYSLPQDDINGIQAIYG 262
Query: 224 --SNPNFTIGSLVESDISTNLAVD 245
SNP G +L D
Sbjct: 263 PSSNPIQPTGPSTPRSCDPSLTFD 286
>gi|359072657|ref|XP_002692980.2| PREDICTED: neutrophil collagenase [Bos taurus]
Length = 470
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 100/199 (50%), Gaps = 24/199 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG P+W + L+Y ++NY L D++A+ + AF W+ V P++F T D
Sbjct: 106 PGNPKWEK---TKLTY-----RIVNYTPNLTEMDVEAIIEEAFKVWSKVSPLTFNRTLDE 157
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
+ ADI+I F DHGD PFDG G+LAH+F P G H DA ETW K+
Sbjct: 158 E-ADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGGDVHFDAEETWT------KTSE 210
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SNP 226
+L VA HE GH LGL HS A+MYP D L DDI G+QA+YG SNP
Sbjct: 211 NYNLFPVAAHEFGHSLGLAHSSDPGALMYPNYAFIDPSSYSLHQDDINGIQAIYGPSSNP 270
Query: 227 NFTIGSLVESDISTNLAVD 245
G + L D
Sbjct: 271 VQPTGPTTPTACDPRLTFD 289
>gi|363729216|ref|XP_425644.3| PREDICTED: stromelysin-1-like [Gallus gallus]
Length = 484
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G+P+W + V L+Y ++NY L D+ A K+AFS W+SV P+ FI+
Sbjct: 98 FSTFAGEPKWAKQV---LTY-----RILNYTPDLRPADVNAAIKKAFSIWSSVTPLKFIK 149
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D D ADI I F G H D PFDG G +AH+++P G H D ETW
Sbjct: 150 RDRGD-ADIMISFATGGHNDFIPFDGPGGSVAHAYAPGKDFGGDAHFDEDETWT------ 202
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
KS +L VA HE GH LGL HS A+MYP + D V L DDI G+Q+LYG+
Sbjct: 203 KSTEGANLFYVAAHEFGHSLGLFHSKEPNALMYPIYRKFDPSVFPLHQDDINGIQSLYGN 262
Query: 225 NPNF 228
+ F
Sbjct: 263 SQLF 266
>gi|326914450|ref|XP_003203538.1| PREDICTED: stromelysin-1-like [Meleagris gallopavo]
Length = 483
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 99/184 (53%), Gaps = 22/184 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G+P+W + V L+Y ++NY L D+ A K+AFS W+SV P+ FI+
Sbjct: 97 FSTFAGEPKWAKQV---LTY-----RILNYTPDLRPADVNAAIKKAFSIWSSVTPLKFIK 148
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D D ADI I F G H D PFDG G +AH+++P G H D ETW
Sbjct: 149 KDRGD-ADIMISFATGGHNDFIPFDGPGGSVAHAYAPGKDIGGDTHFDEDETWT------ 201
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
KS +L VA HE GH LGL HS A+MYP + D V L DDI G+Q+LYG+
Sbjct: 202 KSTEGTNLFYVAAHEFGHSLGLFHSKDPNALMYPVYRKFDPSVFPLHQDDINGIQSLYGN 261
Query: 225 NPNF 228
+ F
Sbjct: 262 SQLF 265
>gi|344287946|ref|XP_003415712.1| PREDICTED: matrilysin-like [Loxodonta africana]
Length = 267
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LFP P+WT V +++++ L + ++ +A + W+ IP+ F
Sbjct: 95 YSLFPNSPKWTSKVVTYRVLSYTQD-----LPRVTVDSLVAKALNMWSKEIPLRFKRVR- 148
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADIRIGF G HGD PFDG LAH+F+P G H D E+W ++ S
Sbjct: 149 WGTADIRIGFARGAHGDYNPFDGPGNTLAHAFAPGPDLGGDAHFDEDESW-----TDGSK 203
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPN 227
+ ++ A HE+GH LGL HS AVMYPT D K L+ DDI+G+Q LYG N
Sbjct: 204 IGINFLYTATHELGHSLGLDHSSDPSAVMYPTYGNEDPKNFKLSQDDIKGIQKLYGKRSN 263
Query: 228 FT 229
T
Sbjct: 264 ST 265
>gi|345323021|ref|XP_001509994.2| PREDICTED: neutrophil collagenase-like [Ornithorhynchus anatinus]
Length = 437
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 105/201 (52%), Gaps = 20/201 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ + PG P+W + L+Y N I+ + D FK+AF W++ P++F + ++
Sbjct: 70 FEVLPGNPKWKSNA---LTYRIL--NYISDMSQADTDEAFKKAFQLWSNASPLTFSKINE 124
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
D ADI I F DHGD PFDG +LAH+F P G H DA ETW K
Sbjct: 125 GD-ADIMIYFARRDHGDNSPFDGPNNILAHAFQPGRGIGGDAHFDADETWT------KGS 177
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNPN 227
+L VA HE GH LGL+HS A+M+PT D K L+ DDI G+Q++YG +PN
Sbjct: 178 KGYNLFLVAAHEFGHSLGLSHSTEPGALMFPTYAFSDPKTFSLSQDDINGIQSIYGLSPN 237
Query: 228 FTIGSLVESDISTNLAVDLRI 248
S+ + S A D R+
Sbjct: 238 ----SVQPTGSSAPKACDPRL 254
>gi|301610867|ref|XP_002934967.1| PREDICTED: matrix metalloproteinase-20-like [Xenopus (Silurana)
tropicalis]
Length = 478
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y +FPG+P+W R +L+Y +K + L D+ W+ P++FI+T
Sbjct: 106 NYHVFPGEPKWQRS---SLTYRITK--YTSSLSTQDVDRAVDLGLKAWSDAAPLNFIKTT 160
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F +GDHGD PFDG G LAH+F+P G H D AE W
Sbjct: 161 QGE-ADIMISFESGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAERWTT------G 213
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGS 224
+L +VA HE GH LGL HS A+MYPT + + L DD++G+QALYG+
Sbjct: 214 KNGFNLFTVAAHEFGHALGLGHSSDPSALMYPTYRYQHPIGFQLPTDDVKGIQALYGT 271
>gi|296087730|emb|CBI34986.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FP PRW P ++ + ++ D +AF WA++ +F +T D
Sbjct: 143 FAFFPNNPRW----PPGQTHLLYVLDSGSHSEAAD---AVGKAFGAWAAISKFTFEQTSD 195
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
A++ I F +HGDG PFDG G +AH+ P G+FH D ETW V + ++
Sbjct: 196 PTVANLNISFQIREHGDGSPFDGPGGTIAHAAPPTDGRFHFDGDETWVVGAVAN----SI 251
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
DL++VA HEIGHLLGL HS V+ A+M+ + P K L DDI G+ ALY
Sbjct: 252 DLQTVATHEIGHLLGLAHSSVEAAIMFAYIAPGATK-GLNQDDIAGITALY 301
>gi|296480364|tpg|DAA22479.1| TPA: matrix metalloproteinase 8 preproprotein-like [Bos taurus]
Length = 494
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 100/199 (50%), Gaps = 24/199 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG P+W + L+Y ++NY L D++A+ + AF W+ V P++F T D
Sbjct: 106 PGNPKWEK---TKLTY-----RIVNYTPNLTEMDVEAIIEEAFKVWSKVSPLTFNRTLDE 157
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
+ ADI+I F DHGD PFDG G+LAH+F P G H DA ETW K+
Sbjct: 158 E-ADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGGDVHFDAEETWT------KTSE 210
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SNP 226
+L VA HE GH LGL HS A+MYP D L DDI G+QA+YG SNP
Sbjct: 211 NYNLFPVAAHEFGHSLGLAHSSDPGALMYPNYAFIDPSSYSLHQDDINGIQAIYGPSSNP 270
Query: 227 NFTIGSLVESDISTNLAVD 245
G + L D
Sbjct: 271 VQPTGPTTPTACDPRLTFD 289
>gi|334330413|ref|XP_001366622.2| PREDICTED: matrix metalloproteinase-20-like [Monodelphis domestica]
Length = 483
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + + ++ A W++ +P++F+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRVSK--YTSSMTHAEVDKAVDMALQAWSNAVPLNFVRQN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 162 TGE-ADIMISFEIGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K + L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQHPYGFRLPKDDVKGIQALYG 271
>gi|444724331|gb|ELW64938.1| Interstitial collagenase [Tupaia chinensis]
Length = 433
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ L PG PRW R L+Y EN L D+ + ++AF W+ V P++F + D
Sbjct: 99 FALTPGNPRWER---THLTYRI--ENYTPDLPRADVDSAIRKAFELWSDVSPLTFTKVFD 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 154 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRD---- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP + V+LA DDI G+QA+YG NP
Sbjct: 209 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-FNGDVELAQDDIDGIQAIYGPSQNP 265
Query: 227 NFTIGSLVESDISTNLAVD 245
G + L D
Sbjct: 266 TQPTGPQTPQACDSKLTFD 284
>gi|283837835|ref|NP_001164610.1| interstitial collagenase precursor [Oryctolagus cuniculus]
gi|116855|sp|P13943.1|MMP1_RABIT RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Flags: Precursor
gi|164888|gb|AAB88016.1| collagenase-1 precursor [Oryctolagus cuniculus]
Length = 468
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PG PRW + L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 FVLTPGNPRWEQ---THLTYRI--ENYTPDLSRADVDNAIEKAFQLWSNVTPLTFTKVSK 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D + W DF +
Sbjct: 154 GQ-ADIMISFVRGDHRDNSPFDGPEGQLAHAFQPGLGIGGDVHFDEDDRWTKDFRN---- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP V LA DDI G+QA+YG NP
Sbjct: 209 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYM-FSGDVQLAQDDIDGIQAIYGPSQNP 265
Query: 227 NFTIGSLVESDISTNLAVD 245
+ +G + L D
Sbjct: 266 SQPVGPQTPKVCDSKLTFD 284
>gi|449449411|ref|XP_004142458.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 164
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 18/174 (10%)
Query: 52 YVLFPGKPRW---TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
Y LFPG P+W RH L+Y F+ I+++ A ++WA +F E
Sbjct: 5 YALFPGNPQWPDYKRH----LTYVFTNNFPIDFV------PSVTEAMARWAGQSLFTFSE 54
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
D ADI I F DH DG PFDG G++ H+F+P G+ HLD ++W+ +K
Sbjct: 55 ASDAQSADINISFQIKDHADGLPFDGPGGIVGHAFAPTDGRLHLDGDDSWSAGLEEKK-- 112
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
V++ + A+HE+GH+LGL HS + +AVM+P ++ K +L DDI G+ ALY
Sbjct: 113 --VNVMNAALHELGHVLGLAHSTLPQAVMWPYIESNALK-NLNDDDIAGLHALY 163
>gi|50731121|ref|XP_417176.1| PREDICTED: interstitial collagenase [Gallus gallus]
Length = 466
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 22/183 (12%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ YV PG P+W ++ L+Y ++NY + TD+ ++A W+SV P++F
Sbjct: 98 EQYVFTPGNPKWKKN---NLTY-----RIVNYTTKMRQTDVDEAIQKALKVWSSVTPLTF 149
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFG 163
+T+D ADI I F DH D PFDG G+LAH+F P G HLD ETW
Sbjct: 150 QKTED-KIADIMISFAYRDHNDNSPFDGPNGLLAHAFQPGEGLGGDVHLDEEETWT---- 204
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
K +L V HE+GH LGL+HS A+MYP D K+ L DDI G+QA+Y
Sbjct: 205 --KDGRGYNLFIVVAHELGHSLGLSHSNDPGALMYPNYAYTDPKEFLLPQDDIDGIQAIY 262
Query: 223 GSN 225
G +
Sbjct: 263 GQS 265
>gi|444724334|gb|ELW64941.1| Matrix metalloproteinase-27 [Tupaia chinensis]
Length = 954
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 112/234 (47%), Gaps = 41/234 (17%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D++L PG P+W +H +T +INY L D+ + ++AF W++ P++F+
Sbjct: 101 DFMLTPGNPKW-KHTNLTY-------RIINYTPQLSEADVHSAIEKAFQVWSAASPLTFL 152
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
+ ADI+I F + DHGD PFDG GVLAH+F P G H DA ETW S
Sbjct: 153 RLSQGE-ADIKIAFVHRDHGDNSPFDGPNGVLAHAFQPGQGIGGDVHFDAEETWTTSSIS 211
Query: 165 EKSPVAVDLE---------------------SVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
AV LE VA HE GH LGL+HS A+MYP
Sbjct: 212 SFGLKAVFLELFYNLGEPLTTHARISDYNLFLVAAHEFGHSLGLSHSSDPGALMYPNYAF 271
Query: 204 RDKKV-DLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDLRIKSSMWATM 256
RD L DDI G+QA+YG + N + + ST A D R+ AT+
Sbjct: 272 RDPTTYTLPQDDINGIQAIYGLSNN----PVQPTGPSTPRACDPRLTFDAIATL 321
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 59 PRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P W ++ L+Y ++NY + D+ ++A W+ V P++F + A
Sbjct: 546 PGWRKY---NLTY-----RIMNYTPDMARADVDEAIQKALEVWSKVTPLTFTKIFK-GIA 596
Query: 116 DIRIGFYNGDHGDG-EPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
DI I F HG FDG LGVL H+F P G H D E W K
Sbjct: 597 DIMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWT------KDTAGF 650
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
L VA E GH LGL+HS + A+M+P D K L+ DDI G+Q++YG P
Sbjct: 651 SLFLVAGDEFGHALGLSHSNDQTALMFPNYVSLDPSKYPLSQDDIDGIQSIYGGLP 706
>gi|68137220|gb|AAY85550.1| matrix metalloproteinase [Azumapecten farreri]
Length = 541
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 17 IHESPQC-------IAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTL 69
+ P+C I + T + ++K+ Y P V F + W R L
Sbjct: 93 VMNKPRCGCNDVFAIWMNQTTQDRVKRFASYTP----------VNFNARSGWRR---TDL 139
Query: 70 SYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG 129
++ + + T +++ +RAF+ WA+ P++F E ADI I F G HGDG
Sbjct: 140 TWQLLGSTRSSRIPSTVVRSEIRRAFALWAAETPLTFREVTRS--ADIEIDFNTGSHGDG 197
Query: 130 EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTH 189
PFDG GVLAH+F PE G H D E W + + + +D VA HE GH LGL H
Sbjct: 198 SPFDGPSGVLAHAFFPELGTTHFDDQEQWTTNSTTGR---GIDPFIVAAHEFGHALGLDH 254
Query: 190 SPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
S V+ A+M+PT L DDI+G++++YG P
Sbjct: 255 SNVRNALMFPTYLGYIPDFKLNNDDIRGIRSIYGGPP 291
>gi|357486209|ref|XP_003613392.1| Matrix metalloprotease [Medicago truncatula]
gi|355514727|gb|AES96350.1| Matrix metalloprotease [Medicago truncatula]
Length = 322
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 15/185 (8%)
Query: 45 ATRHKKDYV--LFPGKPRWTRHVPMTLSYAFSKENMINYLHITD-IKAVFKRAFSKWASV 101
T K +++ P KP W +L+YAF EN ++TD +K++F+ AF++W++
Sbjct: 148 TTTMKNNFINKTMPFKPWWRNVENRSLAYAFHPEN-----NVTDNVKSLFQDAFNRWSNA 202
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
++FIET ++ +DIRI F D G G G +G + S G +LDA E W +
Sbjct: 203 TELNFIETMSFNDSDIRIAFLTLD-GKG----GTVGGSYINSSVNVGSVYLDADEQWVLP 257
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA-LDDIQGVQA 220
+ VDLESV +H++GHLLGL HS V+EA+MYP + ++KK++L +DD+Q +Q
Sbjct: 258 SENVVEEDDVDLESVVMHQVGHLLGLGHSSVEEAIMYPIV-LQEKKIELVNVDDLQRIQE 316
Query: 221 LYGSN 225
+YG N
Sbjct: 317 IYGVN 321
>gi|395520413|ref|XP_003764327.1| PREDICTED: matrix metalloproteinase-20 [Sarcophilus harrisii]
Length = 483
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + + ++ A W++ +P++F+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRVSK--YTSSMSHAEVDKAVDMALQAWSNAVPLNFVRQN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 162 TGE-ADIMISFELGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT + + L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSSDPSALMYPTYRYQHPYGFRLPKDDVKGIQALYG 271
>gi|60207666|gb|AAX14807.1| matrix metalloproteinase 3/10b [Notophthalmus viridescens]
Length = 469
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y FPG+P W H L+Y ++NY + D+ ++AF W+ V P++F
Sbjct: 97 EYSTFPGRPVWRTHA---LTY-----RILNYTPDMARADVDTAIQKAFKVWSDVTPLTFT 148
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
Y ADI+I F +HGD PFDG G LAH+F+P + G H D E W
Sbjct: 149 RIY-YGTADIQISFAAREHGDFSPFDGPHGTLAHAFAPSTGIGGDAHFDEDERWT----- 202
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
K +L VA HE GH LGL+HS + A+M+PT D + L DDI G+QALYG
Sbjct: 203 -KGSAGTNLFLVAAHEFGHSLGLSHSNDRRALMFPTYSYTDPARYQLPKDDINGIQALYG 261
>gi|148224612|ref|NP_001091444.1| matrix metallopeptidase 20 precursor [Xenopus laevis]
gi|117647503|gb|ABK51705.1| matrix metalloproteinase 20 [Xenopus laevis]
gi|213623536|gb|AAI69876.1| Matrix metalloproteinase 20 [Xenopus laevis]
gi|213626681|gb|AAI69874.1| Matrix metalloproteinase 20 [Xenopus laevis]
Length = 478
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 95/178 (53%), Gaps = 16/178 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y +FPG+P+W + TL+Y +K L D+ + W+ P++F++T
Sbjct: 106 NYHVFPGEPKWQKS---TLTYRITK--YTTSLSAQDVDRAVELGLKAWSDAAPLNFVKTT 160
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F +GDHGD PFDG G LAH+F+P G H D AE W
Sbjct: 161 QGE-ADIMISFESGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAERWTT------G 213
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGS 224
+L +VA HE GH LGL HS A+MYPT + + L DD++G+QALYG+
Sbjct: 214 KNGFNLFTVAAHEFGHALGLGHSSDPSALMYPTYRYQHPIGFQLPKDDVKGIQALYGT 271
>gi|373428617|gb|AEY69043.1| matrix metalloproteinase [Thamnodynastes strigatus]
Length = 287
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 96/193 (49%), Gaps = 24/193 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y F G+P+W M L+Y ++NY L I F RAF W+ V PV+F
Sbjct: 96 YTTFSGEPKWDH---MDLTY-----RVVNYSPDLDDASIDDAFSRAFGVWSGVSPVTFTN 147
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE----SGKFHLDAAETWAVDFGS 164
D + DI I F + DHGDG PFDG GVLAH++SP SG H D E W G+
Sbjct: 148 KQDGNV-DILIQFVSRDHGDGSPFDGESGVLAHAYSPGRSPISGDAHFDEDELWTQGGGN 206
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG- 223
+ L VA HE GH LGL HS + A+MYPT + L DD+ G+Q LYG
Sbjct: 207 -----GISLFIVAAHEFGHSLGLGHSSTQGALMYPTYA-YQANLQLNPDDVAGIQYLYGQ 260
Query: 224 -SNPNFTIGSLVE 235
+ P G L
Sbjct: 261 RAGPQSDSGRLAR 273
>gi|224043576|ref|XP_002198031.1| PREDICTED: stromelysin-1-like [Taeniopygia guttata]
Length = 505
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 97/183 (53%), Gaps = 22/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G+P+WT+HV L+Y ++NY L D+ ++A W+ V P+ FI+
Sbjct: 126 FSTFAGEPKWTKHV---LTY-----RIVNYTPDLRPADVNTAIEKALHVWSRVTPLRFIK 177
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D D ADI I F H D PFDG G LAH+++P G H D ETW
Sbjct: 178 KDRGD-ADIMISFAARGHDDFIPFDGPGGSLAHAYAPGKDFGGDAHFDEDETWT------ 230
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA-LDDIQGVQALYGS 224
KS +L VA HE GH LGL+HS A+MYP + D V L DDI G+Q LYGS
Sbjct: 231 KSTEGTNLFYVAAHEFGHSLGLSHSKDPNALMYPVYRKFDPSVLLLHQDDITGIQYLYGS 290
Query: 225 NPN 227
+PN
Sbjct: 291 SPN 293
>gi|160877666|pdb|2JSD|A Chain A, Solution Structure Of Mmp20 Complexed With Nngh
Length = 160
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ + + AD
Sbjct: 1 GEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRINSGE-AD 54
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F NGDHGD PFDG G LAH+F+P G H D AE W + +L
Sbjct: 55 IMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM------GTNGFNL 108
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 109 FTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYG 159
>gi|395520438|ref|XP_003764337.1| PREDICTED: interstitial collagenase [Sarcophilus harrisii]
Length = 472
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+V+ G P+W R+ + +S EN L D+ ++AF W+ V P++F +
Sbjct: 101 FVITEGNPKWERN-----NLTYSIENYTPDLTKEDVDDSIRKAFKVWSDVSPLTFTKISK 155
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI+I FY GDH D PFDG G+LAH+F P G H D E W D+ +
Sbjct: 156 GE-ADIKISFYYGDHYDNSPFDGPNGILAHAFQPGLGIGGDAHFDEDENWTTDYRN---- 210
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL+HS A+M+P+ D + L+ DDI +Q++YG +N
Sbjct: 211 --YNLYRVAAHEFGHSLGLSHSTDIGALMFPSYAFADPNDIQLSQDDIDAIQSIYGPTNN 268
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G+ T L D
Sbjct: 269 PVQPTGTTTPQACDTKLTFD 288
>gi|426370252|ref|XP_004052082.1| PREDICTED: neutrophil collagenase [Gorilla gorilla gorilla]
Length = 467
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W H +T + N L + +++ K AF W P+ F
Sbjct: 99 FMLTPGNPKW-EHTNLT----YRIRNYTPQLSVAEVERAIKDAFELWGVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+ +L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ASYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G +L D
Sbjct: 267 PIQPTGPSTPKPCDPSLTFD 286
>gi|224043574|ref|XP_002198027.1| PREDICTED: stromelysin-1-like [Taeniopygia guttata]
Length = 480
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 97/183 (53%), Gaps = 22/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G+P+WT+HV L+Y ++NY L D+ ++A W+ V P+ FI+
Sbjct: 101 FSTFAGEPKWTKHV---LTY-----RIVNYTPDLRPADVNTAIEKALHVWSRVTPLRFIK 152
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D D ADI I F H D PFDG G LAH+++P G H D ETW
Sbjct: 153 KDRGD-ADIMISFAARGHDDFIPFDGPGGSLAHAYAPGKDFGGDAHFDEDETWT------ 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA-LDDIQGVQALYGS 224
KS +L VA HE GH LGL+HS A+MYP + D V L DDI G+Q LYGS
Sbjct: 206 KSTEGTNLFYVAAHEFGHSLGLSHSKDPNALMYPVYRKFDPSVLLLHQDDITGIQYLYGS 265
Query: 225 NPN 227
+PN
Sbjct: 266 SPN 268
>gi|358421822|ref|XP_003585144.1| PREDICTED: neutrophil collagenase, partial [Bos taurus]
Length = 264
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 95/178 (53%), Gaps = 22/178 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
++ PG P+W + L+Y ++NY L TD++A+ + AF W+ V P++F
Sbjct: 102 FMRTPGNPKWEK---TKLTY-----RIVNYTPNLTETDVEAIIEEAFKVWSKVSPLTFNR 153
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
T D + ADI+I F DHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 154 TLDEE-ADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGGDVHFDAEETWT------ 206
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
K+ +L VA HE GH LGL HS A+MYP D L DDI G+QA+Y
Sbjct: 207 KTSENYNLFPVAAHEFGHSLGLAHSSDPGALMYPNYAFIDPSSYSLHQDDINGIQAIY 264
>gi|327269112|ref|XP_003219339.1| PREDICTED: stromelysin-2-like [Anolis carolinensis]
Length = 470
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP P+W + +S +N + D+ +RA+ W+ V P++F
Sbjct: 98 EYRTFPMSPKWEKK-----DLTYSIQNYTPDMERADVDNAIERAWKMWSDVTPLTFTRVY 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPV 169
D ADI I F +G+HGD PFDG G LAH++SP G H D ETW S
Sbjct: 153 DGS-ADIEISFASGNHGDYIPFDGQGGQLAHAYSPAYGGNAHFDEDETWMT------SST 205
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG----- 223
++L VA HE GH LGL HS +A+M+PT + D + + L DDI+G+Q LYG
Sbjct: 206 GINLFIVAAHEFGHSLGLYHSRELDALMFPTYQFGDPQTLKLHRDDIEGIQHLYGPPEED 265
Query: 224 ----SNPNFTIGSLVESDISTNLAVD 245
NP L+ NLA D
Sbjct: 266 NSEPENPTENNEKLLADSCDPNLAFD 291
>gi|426245552|ref|XP_004016574.1| PREDICTED: interstitial collagenase [Ovis aries]
Length = 488
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PG PRW L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 97 FVLTPGNPRWEN---TNLTYRI--ENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE 151
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P + G H D E W DF +
Sbjct: 152 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGANIGGDAHFDDDERWTNDFQN---- 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+L VA HE GH LGL+HS A+MYP+ V LA DDI G+QA+YG
Sbjct: 207 --YNLYRVAAHEFGHSLGLSHSTDIGALMYPSYI-FSGDVQLAQDDIDGIQAIYGE 259
>gi|403262927|ref|XP_003923816.1| PREDICTED: interstitial collagenase-like [Saimiri boliviensis
boliviensis]
Length = 469
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F +
Sbjct: 100 FVLTEGNPRWEK---THLTYRI--ENYTPDLRRADVDHAIEKAFQLWSNVTPLTFTKVPK 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D ETW +F
Sbjct: 155 GQ-ADIMISFVRGDHQDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDETWTNNFRE---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+M+P+ V LA DDI G+QA+YG +PN
Sbjct: 210 --YNLYRVAAHELGHSLGLSHSTDIGALMFPSYT-FSGDVQLAQDDIDGIQAIYGPSPN 265
>gi|74147434|dbj|BAE42564.1| unnamed protein product [Mus musculus]
Length = 465
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI GVQ +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGVQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|1514965|dbj|BAA11525.1| stromelysin-1/2-b [Cynops pyrrhogaster]
Length = 469
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 95/179 (53%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y FPG+P W H L+Y ++NY + D+ ++AF W+ V P++F +
Sbjct: 98 YSTFPGRPAWRTHA---LTY-----RILNYTPDMARADVDTAIQKAFKVWSDVTPLTFTQ 149
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
Y ADI+I F +HGD PFDG G LAH+F+P + G H D E W+
Sbjct: 150 IY-YGTADIQISFGAREHGDFNPFDGPYGTLAHAFAPGTGIGGDAHFDEDEKWS------ 202
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
K +L VA HE GH LGL+HS + A+M+PT D + L DDI G+QA+YG
Sbjct: 203 KVSTGTNLFLVAAHEFGHSLGLSHSNDRNALMFPTYSYTDPARFRLPKDDINGIQAIYG 261
>gi|359072641|ref|XP_003586977.1| PREDICTED: interstitial collagenase-like [Bos taurus]
gi|296480355|tpg|DAA22470.1| TPA: interstitial collagenase precursor [Bos taurus]
Length = 469
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PG PRW L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTPGNPRWEN---TNLTYRI--ENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P + G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQD---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE GH LGL HS A+MYP+ V L+ DDI G+QA+YG NP
Sbjct: 210 --YNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLSQDDIDGIQAIYGPSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
+G + L D
Sbjct: 267 TQPVGPQTPEVCDSKLTFD 285
>gi|158258755|dbj|BAF85348.1| unnamed protein product [Homo sapiens]
Length = 467
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG---KFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 P 226
P
Sbjct: 267 P 267
>gi|26354468|dbj|BAC40862.1| unnamed protein product [Mus musculus]
Length = 465
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|194382744|dbj|BAG64542.1| unnamed protein product [Homo sapiens]
Length = 305
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 34 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 89 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 142 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 201
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G +L D
Sbjct: 202 PIQPTGPSTPKPCDPSLTFD 221
>gi|4505221|ref|NP_002415.1| neutrophil collagenase preproprotein [Homo sapiens]
gi|116862|sp|P22894.1|MMP8_HUMAN RecName: Full=Neutrophil collagenase; AltName: Full=Matrix
metalloproteinase-8; Short=MMP-8; AltName: Full=PMNL
collagenase; Short=PMNL-CL; Flags: Precursor
gi|180618|gb|AAA88021.1| neutrophil collagenase [Homo sapiens]
gi|50960672|gb|AAH74989.1| Matrix metallopeptidase 8 (neutrophil collagenase) [Homo sapiens]
gi|50960779|gb|AAH74988.1| Matrix metallopeptidase 8 (neutrophil collagenase) [Homo sapiens]
Length = 467
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 P 226
P
Sbjct: 267 P 267
>gi|194382548|dbj|BAG64444.1| unnamed protein product [Homo sapiens]
Length = 426
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 76 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 130
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 131 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 183
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 184 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 243
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G +L D
Sbjct: 244 PIQPTGPSTPKPCDPSLTFD 263
>gi|71648770|gb|AAZ38714.1| matrix metalloproteinase 8 (neutrophil collagenase) [Homo sapiens]
Length = 467
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 P 226
P
Sbjct: 267 P 267
>gi|74214893|dbj|BAE33455.1| unnamed protein product [Mus musculus]
Length = 465
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|119587431|gb|EAW67027.1| matrix metallopeptidase 8 (neutrophil collagenase) [Homo sapiens]
Length = 467
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 P 226
P
Sbjct: 267 P 267
>gi|160333381|ref|NP_032637.3| neutrophil collagenase precursor [Mus musculus]
gi|341940959|sp|O70138.2|MMP8_MOUSE RecName: Full=Neutrophil collagenase; AltName: Full=Collagenase 2;
AltName: Full=Matrix metalloproteinase-8; Short=MMP-8;
Flags: Precursor
gi|3327014|emb|CAA73786.1| collagenase-2 [Mus musculus]
gi|26354354|dbj|BAC40805.1| unnamed protein product [Mus musculus]
gi|27503132|gb|AAH42742.1| Matrix metallopeptidase 8 [Mus musculus]
gi|74192000|dbj|BAE32938.1| unnamed protein product [Mus musculus]
gi|74210332|dbj|BAE23365.1| unnamed protein product [Mus musculus]
gi|148692990|gb|EDL24937.1| matrix metallopeptidase 8 [Mus musculus]
Length = 465
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|26354566|dbj|BAC40911.1| unnamed protein product [Mus musculus]
Length = 465
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|74218057|dbj|BAE42011.1| unnamed protein product [Mus musculus]
Length = 465
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|337298612|ref|NP_001229655.1| matrilysin precursor [Canis lupus familiaris]
Length = 263
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 15/178 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ LFP +P+WT V +T A ++ + + + +A + W+ IP+SF
Sbjct: 95 FSLFPNRPKWTSEV-ITYRIASYTPDLPRF----RVNQLVAKALAMWSKEIPLSFRRVP- 148
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI IGF G HGD PFDG +LAH+F+P G H D E W ++ S
Sbjct: 149 RGTADIMIGFARGAHGDYYPFDGPGNILAHAFAPGPDLGGDAHFDEDERW-----TDGSR 203
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
+ ++ A HE+GH LGL HS +AVMYPT RD K L+ DDI+G+Q LYG N
Sbjct: 204 IGINFLIAATHELGHSLGLGHSSDPDAVMYPTYSIRDSKSFKLSQDDIEGIQKLYGGN 261
>gi|74213270|dbj|BAE41762.1| unnamed protein product [Mus musculus]
Length = 465
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|38267|emb|CAA28858.1| unnamed protein product [Homo sapiens]
Length = 469
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEHERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 TEYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|296216045|ref|XP_002754391.1| PREDICTED: neutrophil collagenase [Callithrix jacchus]
Length = 465
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 93/180 (51%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D++ PG P+W + L+Y +INY L T+++ +AF W+ P++F
Sbjct: 98 DFMKTPGDPKWEQ---TDLTY-----RIINYTPQLSETEVERAIGKAFKVWSDASPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F+ DHGD PFDG G+LAH+F P G H DA ETW
Sbjct: 150 RISQGE-ADINIAFFQRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDAEETWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+ +L VA HE GH LGL+HS A+MYP RD L DDI G+QA+YG
Sbjct: 204 -NTSKNYNLFLVAAHEFGHSLGLSHSSDPGALMYPNYAFRDPSTYSLPQDDINGIQAIYG 262
>gi|327242231|gb|AEA40854.1| matrix metalloproteinase-7 [Canis lupus familiaris]
Length = 230
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 95/178 (53%), Gaps = 15/178 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ LFP +P+WT V +T A ++ + + + +A + W+ IP+SF
Sbjct: 62 FSLFPNRPKWTSEV-ITYRIASYTPDLPRFR----VNQLVAKALAMWSKEIPLSFRRVP- 115
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI IGF G HGD PFDG +LAH+F+P G H D E W ++ S
Sbjct: 116 RGTADIMIGFARGAHGDYYPFDGPGNILAHAFAPGPDLGGDAHFDEDERW-----TDGSR 170
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
+ ++ A HE+GH LGL HS +AVMYPT RD K L+ DDI+G+Q LYG N
Sbjct: 171 IGINFLIAATHELGHSLGLGHSSDPDAVMYPTYSIRDSKSFKLSQDDIEGIQKLYGGN 228
>gi|397516418|ref|XP_003828427.1| PREDICTED: neutrophil collagenase isoform 1 [Pan paniscus]
Length = 467
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFKLWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------DTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G +L D
Sbjct: 267 PIQPTGPSTPKPCDPSLTFD 286
>gi|344287950|ref|XP_003415714.1| PREDICTED: neutrophil collagenase [Loxodonta africana]
Length = 471
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W M ++Y + + + +++ F++AF+ W+ +SF +
Sbjct: 102 FMLTPGNPKWNH---MNVTYRIN--SYPSCWTKAEVETAFRKAFALWSRASRLSFTSISE 156
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
ADI IGF+ +HGD PFDG G+LAH+F P G H DA ETW F +
Sbjct: 157 GK-ADIEIGFFEKEHGDNSPFDGPNGILAHAFQPGQDIGGDVHFDAEETWTNSFEN---- 211
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYPT D L DDI+G+QA+YG S+
Sbjct: 212 --YNLFLVAAHEFGHSLGLAHSSDPGALMYPTYAYTDTSSYSLPEDDIEGIQAIYGPSSD 269
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G LA D
Sbjct: 270 PIQPTGPSTPRACDPRLAFD 289
>gi|397516420|ref|XP_003828428.1| PREDICTED: neutrophil collagenase isoform 2 [Pan paniscus]
Length = 444
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 76 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFKLWSVASPLIFTRISQ 130
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 131 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------DTS 183
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 184 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 243
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G +L D
Sbjct: 244 PIQPTGPSTPKPCDPSLTFD 263
>gi|449449415|ref|XP_004142460.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 294
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 22/204 (10%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRW---TRHVPMTLSYAFSKENM 78
Q +R KF ++ + D E + H YVLFP +W RH L+Y F+
Sbjct: 109 QRCGIRDVFKFNSSKNLE-DDLEMSSH---YVLFPNNEKWPDYKRH----LTYMFTNNFP 160
Query: 79 INYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
++++ A ++WA+ +F E D ADI I F DH DG FDG GV
Sbjct: 161 VDFV------PSVTEAMARWAAQSLFTFSEASDAQSADINISFQVKDHADGSAFDGPGGV 214
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+ H+F+P G+ HLD ++W+ K ++ +VA+HE+GH+LGL HS + +AVM+
Sbjct: 215 VGHAFAPTDGRLHLDGDDSWSAGLEENK----FNVMNVALHELGHVLGLAHSTLPQAVMW 270
Query: 199 PTLKPRDKKVDLALDDIQGVQALY 222
P + K +L DDI G+ ALY
Sbjct: 271 PYIDSNALK-NLNDDDIAGLHALY 293
>gi|291383991|ref|XP_002708467.1| PREDICTED: matrix metalloproteinase 8 [Oryctolagus cuniculus]
Length = 408
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 87/155 (56%), Gaps = 14/155 (9%)
Query: 78 MINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
+INY L +D+++ +RAF W++V P++F + ADI I F GDHGD PFDG
Sbjct: 60 IINYTPQLSTSDVESAIERAFGVWSAVSPLTFTRIVQGE-ADINIAFAQGDHGDISPFDG 118
Query: 135 VLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G+LAH+F P G H DA ETW K+ +L VA HE GH LGL HS
Sbjct: 119 PNGILAHAFQPGQGIGGDAHFDAEETWT------KTSRNYNLFIVAAHEFGHSLGLAHSS 172
Query: 192 VKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSN 225
A+MYP R+ L DDI G+QALYGS+
Sbjct: 173 NPVALMYPNYIFREPSTFSLPQDDINGIQALYGSS 207
>gi|386713658|ref|YP_006179981.1| M10 family peptidase [Halobacillus halophilus DSM 2266]
gi|384073214|emb|CCG44705.1| M10 family peptidase [Halobacillus halophilus DSM 2266]
Length = 390
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 42 PAEATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWAS 100
P E R K DY L G RW + Y F +N + + T + ++A +WA
Sbjct: 84 PGEDVREKVNDYSLSGG--RWEN---TNIRYFF--QNGTSDISGTTEWDIMRQAMDRWAD 136
Query: 101 VIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSF-------SPESGKFHLD 153
V P++F + ADIR + G HGD +PFDG VLAH+F P +G H D
Sbjct: 137 VTPLTFTQVTTEADADIRFLWATGSHGDDDPFDGFGNVLAHAFYPPPVNSRPTAGDVHFD 196
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALD 213
E W + G DL +VA+HE+GH LGL HS + A+M+PT + ++ L D
Sbjct: 197 NDEKWDTEDGGFWWWRRRDLLTVAIHEVGHALGLAHSTIGNAIMWPTYE--GERRTLHSD 254
Query: 214 DIQGVQALYGS 224
DI+G+QALYGS
Sbjct: 255 DIEGIQALYGS 265
>gi|301608600|ref|XP_002933877.1| PREDICTED: matrix metalloproteinase-28-like [Xenopus (Silurana)
tropicalis]
Length = 497
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 17/208 (8%)
Query: 30 PKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKA 89
P+ +K + + ++ R ++ +W + L+Y N YL ++
Sbjct: 84 PRCGMKDDESLELVKSHRQQRKKRYISKSKKWYK---QHLTYQIV--NWPWYLSQHQVRQ 138
Query: 90 VFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPES 147
K AF W++V ++F E D ADIR+ F++GDH DG FDG G LAH+F P
Sbjct: 139 AVKAAFQLWSNVSSLTFSEALR-DPADIRLAFFHGDHNDGAGNAFDGPGGALAHAFFPRR 197
Query: 148 GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK 207
G+ H D+AE W+++ + +L V HEIGH LGL HSP K A+M P K +K
Sbjct: 198 GEAHFDSAEHWSLNGKGQ------NLFVVLAHEIGHTLGLQHSPFKNALMSPYYKKLNKD 251
Query: 208 VDLALDDIQGVQALYGSNPNFTIGSLVE 235
L DD+ +Q LYG+ P+ G+LV+
Sbjct: 252 YVLNFDDVLAIQNLYGAPPS---GNLVQ 276
>gi|345322983|ref|XP_003430663.1| PREDICTED: stromelysin-1-like isoform 4 [Ornithorhynchus anatinus]
Length = 440
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y +FPG P+W +H L+Y EN L D++ ++AF W+ V P++F + ++
Sbjct: 104 YSVFPGSPKWNKH---DLTYRI--ENYTPDLSQADVEFCIQKAFQVWSEVTPLTFKKINE 158
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F +G HGD PFDG G LAH++ P G H D ETW+ K
Sbjct: 159 GQ-ADIMISFASGAHGDFYPFDGPEGTLAHAYYPGIGIGGDAHFDEDETWS------KDS 211
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HE GH LGL HS V +++M+P D L DDI G+Q LYG
Sbjct: 212 RRYNLFIVAAHEFGHSLGLLHSNVPQSLMFPHYSDSDPNTFQLHQDDINGIQMLYG 267
>gi|449449431|ref|XP_004142468.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
gi|449492749|ref|XP_004159089.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 295
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRW---TRHVPMTLSYAFSKEN 77
P+C V KF ++ + D E + H Y LFP +W RH L+Y F+
Sbjct: 110 PRC-GVPDVFKFNSSKNLE-DDLEMSSH---YALFPNNEKWPDYKRH----LTYMFTNNF 160
Query: 78 MINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLG 137
I+++ A ++WA+ +F E D ADI I F DH DG FDG G
Sbjct: 161 PIDFV------PSMTEAMARWAAQSLFTFSEASDAQSADINISFQVKDHADGFAFDGPGG 214
Query: 138 VLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
V+ H+F+P G+ HLD +TW+ +K V++ + A+HE+GH+LGL HS + +AVM
Sbjct: 215 VVGHAFAPTDGRLHLDGDDTWSAGLEEKK----VNVMNAALHELGHVLGLAHSTLPQAVM 270
Query: 198 YPTLKPRDKKVDLALDDIQGVQALY 222
+P ++ K +L DDI G+ ALY
Sbjct: 271 WPYIESNALK-NLNDDDIAGIHALY 294
>gi|3025475|gb|AAC12707.1| neutrophil collagenase [Mus musculus]
Length = 465
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YWIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|58176727|pdb|1SU3|A Chain A, X-Ray Structure Of Human Prommp-1: New Insights Into
Collagenase Action
gi|58176728|pdb|1SU3|B Chain B, X-Ray Structure Of Human Prommp-1: New Insights Into
Collagenase Action
Length = 450
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 81 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 135
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 136 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRE---- 190
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 191 --YNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 247
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 248 VQPIGPQTPKACDSKLTFD 266
>gi|62897631|dbj|BAD96755.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 469
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|62898123|dbj|BAD97001.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 469
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|54697154|gb|AAV38949.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|61357929|gb|AAX41472.1| matrix metalloproteinase 1 [synthetic construct]
Length = 469
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|30583961|gb|AAP36229.1| Homo sapiens matrix metalloproteinase 1 (interstitial collagenase)
[synthetic construct]
gi|54697160|gb|AAV38952.1| matrix metalloproteinase 1 (interstitial collagenase) [synthetic
construct]
gi|60654101|gb|AAX29743.1| matrix metalloproteinase 1 [synthetic construct]
gi|60654103|gb|AAX29744.1| matrix metalloproteinase 1 [synthetic construct]
gi|60830074|gb|AAX36910.1| matrix metalloproteinase 1 [synthetic construct]
gi|61368096|gb|AAX43102.1| matrix metalloproteinase 1 [synthetic construct]
Length = 470
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRE---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 210 --YNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|4505215|ref|NP_002412.1| interstitial collagenase isoform 1 preproprotein [Homo sapiens]
gi|116852|sp|P03956.3|MMP1_HUMAN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
collagenase; AltName: Full=Matrix metalloproteinase-1;
Short=MMP-1; Contains: RecName: Full=22 kDa interstitial
collagenase; Contains: RecName: Full=27 kDa interstitial
collagenase; Flags: Precursor
gi|30126|emb|CAA38691.1| type I interstitial collagenase [Homo sapiens]
gi|1688258|gb|AAB36941.1| collagenase [Homo sapiens]
gi|15530201|gb|AAH13875.1| Matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
gi|30582587|gb|AAP35520.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|54112080|gb|AAV28732.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
sapiens]
gi|60818387|gb|AAX36462.1| matrix metalloproteinase 1 [synthetic construct]
gi|61362913|gb|AAX42300.1| matrix metalloproteinase 1 [synthetic construct]
gi|61362918|gb|AAX42301.1| matrix metalloproteinase 1 [synthetic construct]
gi|119587435|gb|EAW67031.1| matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
gi|123979652|gb|ABM81655.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
construct]
gi|123994457|gb|ABM84830.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
construct]
gi|208965212|dbj|BAG72620.1| matrix metallopeptidase 1 [synthetic construct]
Length = 469
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|345322979|ref|XP_003430661.1| PREDICTED: stromelysin-1-like isoform 2 [Ornithorhynchus anatinus]
gi|345322981|ref|XP_003430662.1| PREDICTED: stromelysin-1-like isoform 3 [Ornithorhynchus anatinus]
Length = 488
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y +FPG P+W +H L+Y EN L D++ ++AF W+ V P++F + ++
Sbjct: 104 YSVFPGSPKWNKH---DLTYRI--ENYTPDLSQADVEFCIQKAFQVWSEVTPLTFKKINE 158
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F +G HGD PFDG G LAH++ P G H D ETW+ K
Sbjct: 159 GQ-ADIMISFASGAHGDFYPFDGPEGTLAHAYYPGIGIGGDAHFDEDETWS------KDS 211
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HE GH LGL HS V +++M+P D L DDI G+Q LYG
Sbjct: 212 RRYNLFIVAAHEFGHSLGLLHSNVPQSLMFPHYSDSDPNTFQLHQDDINGIQMLYG 267
>gi|397516410|ref|XP_003828423.1| PREDICTED: interstitial collagenase-like isoform 1 [Pan paniscus]
Length = 469
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L TD+ +AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRTDVDHAIAKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGHSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKVCDSKLTFD 285
>gi|5771541|dbj|BAA83518.1| matrilysin [Sus scrofa]
Length = 267
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 99/182 (54%), Gaps = 17/182 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP +P+WT + +++++ H+T + + +A W++ IP+SF +
Sbjct: 94 EYSLFPSQPKWTSKIVTYRIVSYTRD----LPHVT-VNQLVTKALKMWSNEIPLSFKKVS 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P G H D E W+ D GS
Sbjct: 149 -WGIADIIIGFARGAHGDAYPFDGPGNTLAHAFAPGPGLGGDAHFDEDEHWS-DGGS--- 203
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL-KPRDKKVDLALDDIQGVQALYG--S 224
+ ++ A HE+GH LGL HS AVMYPT + K L+ DDI G+Q LYG S
Sbjct: 204 -IGINFLYAATHELGHSLGLAHSSDPNAVMYPTYGEVYSKDFKLSQDDINGIQKLYGKRS 262
Query: 225 NP 226
NP
Sbjct: 263 NP 264
>gi|449265941|gb|EMC77068.1| Matrix metalloproteinase-28, partial [Columba livia]
Length = 473
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +YL +++ K AF W++V + F E D ADIR+ F++GDH DG FDG
Sbjct: 95 NWPSYLPQHEVRLAVKAAFELWSNVSSLVFWEARDGP-ADIRLTFFHGDHNDGLNNAFDG 153
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D+AE W++ G + +L V HEIGH LGL HSPVK
Sbjct: 154 PGGALAHAFFPRRGEAHFDSAERWSLHSGKGR-----NLFVVVAHEIGHTLGLEHSPVKS 208
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P K K L+ DDI VQ LYG
Sbjct: 209 ALMSPYYKKLSKDFVLSWDDILAVQNLYG 237
>gi|211063451|ref|NP_001129963.1| matrilysin precursor [Ovis aries]
gi|209571739|gb|ACI62525.1| matrix metallopeptidase 7 [Ovis aries]
Length = 267
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ LFP +P+WT V ++ + HIT + + +AF W+ VIP++F
Sbjct: 94 EFSLFPNQPKWTSKVVTYRIMTYTSD----LPHIT-VNQLVAKAFKIWSEVIPLTFKRVK 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDERW-----TDAS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL-KPRDKKVDLALDDIQGVQALYG 223
+ ++ VA HE+GH LGL+HS +AVMYPT K K L+ DDI G+Q LYG
Sbjct: 203 GIGINFLYVATHELGHSLGLSHSSDPDAVMYPTYSKEESKNFKLSQDDINGIQKLYG 259
>gi|225543094|ref|NP_001139410.1| interstitial collagenase isoform 2 [Homo sapiens]
gi|194387426|dbj|BAG60077.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 142 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 200
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 201 VQPIGPQTPKACDSKLTFD 219
>gi|62897673|dbj|BAD96776.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 405
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ V ++AF W++V P++F + +
Sbjct: 36 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHVIEKAFQLWSNVTPLTFTKVSE 90
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 91 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 143
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA +DI G+QA+YG NP
Sbjct: 144 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQNDIDGIQAIYGRSQNP 202
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 203 VQPIGPQTPKACDSKLTFD 221
>gi|149633237|ref|XP_001508976.1| PREDICTED: stromelysin-1-like isoform 1 [Ornithorhynchus anatinus]
Length = 476
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y +FPG P+W +H L+Y EN L D++ ++AF W+ V P++F + ++
Sbjct: 104 YSVFPGSPKWNKH---DLTYRI--ENYTPDLSQADVEFCIQKAFQVWSEVTPLTFKKINE 158
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F +G HGD PFDG G LAH++ P G H D ETW+ K
Sbjct: 159 GQ-ADIMISFASGAHGDFYPFDGPEGTLAHAYYPGIGIGGDAHFDEDETWS------KDS 211
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HE GH LGL HS V +++M+P D L DDI G+Q LYG
Sbjct: 212 RRYNLFIVAAHEFGHSLGLLHSNVPQSLMFPHYSDSDPNTFQLHQDDINGIQMLYG 267
>gi|126327142|ref|XP_001366839.1| PREDICTED: macrophage metalloelastase-like [Monodelphis domestica]
Length = 472
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 26/187 (13%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ Y +FP +P W ++ L+Y ++NY + D+ KRAF W++V P++F
Sbjct: 97 QKYGVFPNRPTWKKY---DLTY-----RIMNYTPDMTRDDVDYAIKRAFEVWSNVTPLTF 148
Query: 107 --IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVD 161
I T + ADI I F +G HGD PFDG G LAH+++P G H D E+W D
Sbjct: 149 RRIYTGE---ADIMISFASGVHGDFSPFDGRDGTLAHAYAPGPGIGGDAHFDEDESWTRD 205
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQA 220
+L VA HE GH LGL HS +A+MYPT + D ++ L+ DDI+G+QA
Sbjct: 206 L------RGYNLFLVAAHEFGHSLGLDHSNDPQALMYPTYRRADPRQFRLSHDDIKGIQA 259
Query: 221 LYGSNPN 227
LYG N
Sbjct: 260 LYGGPVN 266
>gi|397516412|ref|XP_003828424.1| PREDICTED: interstitial collagenase-like isoform 2 [Pan paniscus]
Length = 403
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L TD+ +AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRTDVDHAIAKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 142 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGHSQNP 200
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 201 VQPIGPQTPKVCDSKLTFD 219
>gi|61368093|gb|AAX43101.1| matrix metalloproteinase 1 [synthetic construct]
Length = 470
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRE---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 210 --YNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPPTPKACDSKLTFD 285
>gi|180665|gb|AAA35699.1| skin collagenase precursor [Homo sapiens]
Length = 469
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLRYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>gi|2392404|pdb|1KBC|A Chain A, Procarboxypeptidase Ternary Complex
gi|2392405|pdb|1KBC|B Chain B, Procarboxypeptidase Ternary Complex
gi|410375180|pdb|1JAN|A Chain A, Complex Of Pro-Leu-Gly-Hydroxylamine With The Catalytic
Domain Of Matrix Metallo Proteinase-8 (Phe79 Form)
Length = 164
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 1 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 56 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 109 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG 164
>gi|260820268|ref|XP_002605457.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
gi|229290790|gb|EEN61467.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
Length = 548
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 9 LLLIFIIFIHESPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMT 68
LL + + P+C TP +L++ + TR K+ F G RW ++
Sbjct: 83 LLDDKTVEMMRKPRCGVRDVTPSERLRRDTG---LQITRSKR--YAFAGDYRWKKN---D 134
Query: 69 LSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGD 125
L+Y + NY L + ++ +R F W+ V P+ F ET + ADI I F D
Sbjct: 135 LTY-----RIWNYTPDLSPSQVREAIRRGFQVWSDVTPLRFRETTSSN-ADINIQFSRFD 188
Query: 126 HGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLL 185
H DG PFDG G LAH+F PE G+ H D E W ++ +L V HEIGH L
Sbjct: 189 HRDGYPFDGRGGTLAHAFYPEDGRTHFDDDEQW-----TDGMYAGTNLFIVTAHEIGHAL 243
Query: 186 GLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
GL HS A+M P + D L +DD +G+Q LYG
Sbjct: 244 GLAHSSYPGALMAPFYQGYDPDFKLPVDDTRGIQQLYG 281
>gi|324517786|gb|ADY46918.1| 50 kDa hatching enzyme [Ascaris suum]
Length = 248
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 7/138 (5%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYD--FADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
++ RAF W SV + F E + ADI + F G HGD PFDG G++AH+F
Sbjct: 89 VRNTLHRAFYLWQSVSSIRFYELSEESPLTADINVIFAKGAHGDKLPFDGKDGIVAHAFY 148
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P GK H DA E W ++ V+L AVHEIGH++GL HS + AVM+P+ +P
Sbjct: 149 PTEGKLHFDADEKWTLNRRD-----GVNLYQTAVHEIGHIIGLEHSTDERAVMFPSYRPY 203
Query: 205 DKKVDLALDDIQGVQALY 222
D + LA DD++GV+ LY
Sbjct: 204 DPEYTLADDDVRGVRRLY 221
>gi|432859900|ref|XP_004069292.1| PREDICTED: matrix metalloproteinase-19-like [Oryzias latipes]
Length = 475
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
+D+ A + AF W+ V P++F E D Y ADI+I F+ D PFDG VLAH+ S
Sbjct: 128 SDVSAAIRSAFKYWSDVTPLTFKEVD-YGRADIKISFHKKDGHCSVPFDGRGHVLAHAES 186
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
PESG H D E W +E+S +L VA HEIGH LGL HS + A+M P
Sbjct: 187 PESGIVHFDEDEFW-----TEQSYYGTNLRIVAAHEIGHALGLGHSQFRSALMAPVYAGY 241
Query: 205 DKKVDLALDDIQGVQALYGSNPNFTIGS 232
L DD+QG+QALYG + T+ S
Sbjct: 242 RANFRLHSDDVQGIQALYGKRLSSTLAS 269
>gi|60207592|gb|AAX14804.1| matrix metalloproteinase 3/10a [Notophthalmus viridescens]
Length = 484
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y F G+P W T S + N + D+ +RAF W+ V P++F
Sbjct: 98 EYSHFGGRPTW-----RTTSLTYRILNYTPDMAEADVDTAIRRAFKVWSDVTPLTFSRIY 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI+I F G HGD PFDG G LAH+F+P + G H D ETW GS
Sbjct: 153 E-GTADIQISFGAGVHGDFYPFDGPHGTLAHAFAPGNSIGGDAHFDEDETWTA--GS--- 206
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+L VA HE GH LGL HS + A+MYPT D + L DD+ G+QALYG++P
Sbjct: 207 -AGYNLFLVAAHEFGHSLGLYHSGDRSALMYPTYSYTDPARFRLPQDDVDGIQALYGASP 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|8569322|pdb|1BZS|A Chain A, Crystal Structure Of Mmp8 Complexed With Hmr2909
Length = 165
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 1 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 56 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 109 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG 164
>gi|449449425|ref|XP_004142465.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 295
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 66 PMTLSYAFSKENMINYLHITDIKAVFKR----AFSKWASVIPVSFIETDDYDFADIRIGF 121
P L + SK N+ Y + D FK A +WA F E + ADI F
Sbjct: 138 PDNLKWPVSKYNL-RYTFLDDFPNDFKEPVMNAMEQWALFSLFRFSEAVEAQEADITFNF 196
Query: 122 YNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEI 181
G+HGDG PFDG GVLAH+F P G+ H D E WA GS + V + VA+HE+
Sbjct: 197 VRGNHGDGYPFDGKGGVLAHAFGPLDGRVHFDWDEDWAD--GSVGGFINVGM--VALHEL 252
Query: 182 GHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
GH+LGL HS +++A+M+P ++ ++ L DDI+G+Q LY
Sbjct: 253 GHVLGLAHSTIRDAIMWPYMEAGEQTRGLQFDDIEGIQTLY 293
>gi|332837587|ref|XP_003313323.1| PREDICTED: neutrophil collagenase [Pan troglodytes]
Length = 467
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W H +T + N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKW-EHTNLT----YRIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------DTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 PNFTIGSLVESDISTNLAVD 245
P G +L D
Sbjct: 267 PIQPTGPSTPKPCDPSLTFD 286
>gi|449520890|ref|XP_004167465.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 194
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 89/161 (55%), Gaps = 9/161 (5%)
Query: 66 PMTLSYAFSKENMINYLHITDIKAVFKR----AFSKWASVIPVSFIETDDYDFADIRIGF 121
P L + SK N+ Y + D FK A +WA F E + ADI F
Sbjct: 37 PDNLKWPVSKYNL-RYTFLDDFPNDFKEPVMNAMEQWALFSLFRFSEAVEAQEADITFNF 95
Query: 122 YNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEI 181
G+HGDG PFDG GVLAH+F P G+ H D E WA GS + V + VA+HE+
Sbjct: 96 VRGNHGDGYPFDGKGGVLAHAFGPLDGRVHFDWDEDWAD--GSVGGFINVGM--VALHEL 151
Query: 182 GHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
GH+LGL HS +++A+M+P ++ ++ L DDI+G+Q LY
Sbjct: 152 GHVLGLAHSTIRDAIMWPYMEAGEQTRGLQFDDIEGIQTLY 192
>gi|332208024|ref|XP_003253096.1| PREDICTED: interstitial collagenase isoform 1 [Nomascus leucogenys]
Length = 470
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 101 FVLTAGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFKLWSNVTPLTFTKVSE 155
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 156 GQ-ADIMISFVRGDHQDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRE---- 210
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 211 --YNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 267
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 268 VQPIGPQTPKVCDSKLTFD 286
>gi|297690065|ref|XP_002822446.1| PREDICTED: interstitial collagenase isoform 1 [Pongo abelii]
Length = 469
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGPSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKVCDSKLTFD 285
>gi|261249969|ref|NP_001159701.1| interstitial collagenase precursor [Sus scrofa]
gi|116854|sp|P21692.2|MMP1_PIG RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Contains: RecName:
Full=18 kDa interstitial collagenase; Flags: Precursor
gi|199652431|gb|ACH91675.1| matrix metallopeptidase 1 [Sus scrofa]
Length = 469
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++VL PG PRW L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 EFVLTPGNPRWEN---THLTYRI--ENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 154 EGQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRD--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG + N
Sbjct: 210 ---YNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-YTGDVQLSQDDIDGIQAIYGPSEN 265
>gi|157832016|pdb|1MNC|A Chain A, Structure Of Human Neutrophil Collagenase Reveals Large
S1' Specificity Pocket
Length = 163
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYD 113
L PG P+W R L+Y N L +++ K AF W+ P+ F +
Sbjct: 1 LTPGGPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTGISQGE 55
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVA 170
ADI I FY DHGDG PFDG G+LAH+F P G H DA ETW +
Sbjct: 56 -ADINIAFYQRDHGDGSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTSAN 108
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 109 YNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG 162
>gi|344287827|ref|XP_003415653.1| PREDICTED: macrophage metalloelastase [Loxodonta africana]
Length = 470
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 18/180 (10%)
Query: 50 KDYVLFPGKPRWTR-HVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
+ Y PG+P W + H+ + +N + D+ ++AF W+ V P++F +
Sbjct: 99 RHYSTMPGRPVWKKGHI------TYRIQNYTPDMAREDVNYAIQKAFQVWSDVTPLTFRQ 152
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
+ ADI I F G HGD PFDG GV+AH+F+P + G H D +E W F
Sbjct: 153 IYAGE-ADIMIFFAQGAHGDFYPFDGRGGVIAHAFAPGTGIGGDTHFDESEIWTKGFK-- 209
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
++L VAVHE+GH LGL HS ++A+M+PT D K L+ DDI+G+Q+LYG
Sbjct: 210 ----GINLFLVAVHELGHSLGLNHSNDRKAIMFPTYSYVDTKTFRLSTDDIRGIQSLYGG 265
>gi|426370254|ref|XP_004052083.1| PREDICTED: interstitial collagenase isoform 1 [Gorilla gorilla
gorilla]
Length = 469
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKVCDSKLTFD 285
>gi|187607872|ref|NP_001120324.1| uncharacterized protein LOC100145387 precursor [Xenopus (Silurana)
tropicalis]
gi|166797027|gb|AAI59193.1| Mmp13 protein [Danio rerio]
gi|170284421|gb|AAI60951.1| LOC100145387 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 32 FKLKQSDKYD---------PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
FKLK S K D P K Y FPG +W +H L+Y EN +
Sbjct: 75 FKLKVSGKLDQETLEVMKKPRCGVPDIKAYSTFPGDYKWKKH---QLTYRI--ENYTLDM 129
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
+ ++ RA W+ V P+ F ADI I F GDHGDG PFDG G LAH+
Sbjct: 130 SVAEVDDSISRALKVWSDVTPLRFTRIYS-GTADIMIFFATGDHGDGYPFDGPNGFLAHA 188
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
+ P G H D ET+ S +S L SVA HE GH LGL HS A+MYP
Sbjct: 189 YPPYEGVGGDAHFDDDETF-----SYRSTQYYTLFSVAAHEFGHSLGLGHSRDPGALMYP 243
Query: 200 TLKPRD-KKVDLALDDIQGVQALYGSN 225
T RD + L DD+ G+Q+LYG N
Sbjct: 244 TYVYRDMDRFILPRDDVNGIQSLYGPN 270
>gi|930269|emb|CAA38526.1| propeptide for matix metalloproteinase (type I collagenase) [Sus
scrofa]
Length = 445
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++VL PG PRW L+Y EN L D+ ++AF W++V P++F +
Sbjct: 75 EFVLTPGNPRWEN---THLTYRI--ENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS 129
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 130 EGQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRD--- 185
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG + N
Sbjct: 186 ---YNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-YTGDVQLSQDDIDGIQAIYGPSEN 241
>gi|390354645|ref|XP_785149.3| PREDICTED: uncharacterized protein LOC579968 [Strongylocentrotus
purpuratus]
Length = 692
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDF-ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
I V + A W V + E D + ADI I G+HGDG FDG G+L H+F P
Sbjct: 159 IGDVVRDAMQMWMDVTSLILCEVVDQNIDADIHIRHVLGEHGDGISFDGPGGILGHAFLP 218
Query: 146 ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
G+ H DAAE W V +D V VHEIGH LGLTHS V+ ++MYP + R
Sbjct: 219 THGEIHFDAAENWTVGIAD-----GIDYVQVVVHEIGHALGLTHSGVEGSIMYPFYQFR- 272
Query: 206 KKVDLALDDIQGVQALYGSNPN 227
KV+L DDIQG+Q LYG+ PN
Sbjct: 273 PKVELQDDDIQGIQLLYGT-PN 293
>gi|149020725|gb|EDL78530.1| matrix metallopeptidase 8 [Rattus norvegicus]
Length = 466
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N + ++K ++AF W+ ++F ET
Sbjct: 99 DFLLTPGSPKWT-HTNLT----YRIINHTPQMSKAEVKTEIEKAFKIWSVPSTLTFTETL 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ + ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 154 EGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDSEETWTQDSNN--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 210 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 266
Query: 227 N 227
N
Sbjct: 267 N 267
>gi|426370256|ref|XP_004052084.1| PREDICTED: interstitial collagenase isoform 2 [Gorilla gorilla
gorilla]
Length = 403
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 142 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 200
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 201 VQPIGPQTPKVCDSKLTFD 219
>gi|332208026|ref|XP_003253097.1| PREDICTED: interstitial collagenase isoform 2 [Nomascus leucogenys]
Length = 403
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 34 FVLTAGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFKLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHQDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRE---- 143
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 144 --YNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 200
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 201 VQPIGPQTPKVCDSKLTFD 219
>gi|431916537|gb|ELK16515.1| Matrilysin [Pteropus alecto]
Length = 272
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ L + + ++AF W+ IP+ F
Sbjct: 94 EYSLFPESPKWTSKVVTYRIISYTRD-----LSHFQVNQLVEKAFEMWSKEIPLHFKRIR 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F P G H D E W ++ S
Sbjct: 149 -WGIADIMIGFARGAHGDSYPFDGPGNTLAHAFLPGPGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LGL HS AVMYPT +D K L+ DDI+ +Q LYG+
Sbjct: 203 SIGINFLYTATHELGHSLGLGHSSDPNAVMYPTYGDKDSKDFKLSQDDIKEIQKLYGNIY 262
Query: 227 NFTIGSL 233
+F G
Sbjct: 263 DFKYGGF 269
>gi|1633203|pdb|1JAQ|A Chain A, Complex Of 1-Hydroxylamine-2-Isobutylmalonyl-Ala-Gly-Nh2
With The Catalytic Domain Of Matrix Metallo Proteinase-8
(Met80 Form)
gi|1633204|pdb|1JAP|A Chain A, Complex Of Pro-Leu-Gly-Hydroxylamine With The Catalytic
Domain Of Matrix Metallo Proteinase-8 (Met80 Form)
gi|1633206|pdb|1JAO|A Chain A, Complex Of 3-Mercapto-2-Benzylpropanoyl-Ala-Gly-Nh2 With
The Catalytic Domain Of Matrix Metallo Proteinase-8
(Met80 Form)
gi|13787018|pdb|1I73|A Chain A, Complex Of Pro-Leu-L-Trp Phosphonate With The Catalitic
Domain Of Matrix Metallo Proteinase-8 (Met80 Form)
gi|13787020|pdb|1I76|A Chain A, Complex Of 2-(Biphenyl-4-Sulfonyl)-1,2,3,4-Tetrahydro-
Isoquinoline-3-Carboxylic Acid (D-Tic Derivative) With T
Catalitic Domain Of Matrix Metallo Proteinase-8 (Met80
Form)
gi|15825971|pdb|1JJ9|A Chain A, Crystal Structure Of Mmp8-Barbiturate Complex Reveals
Mechanism For Collagen Substrate Recognition
gi|83753841|pdb|1ZP5|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A N-
Hydroxyurea Inhibitor
gi|99031738|pdb|1ZS0|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A
Phosphonate Inhibitor (s-enantiomer)
gi|109157078|pdb|1ZVX|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A
Phosphonate Inhibitor (r-enantiomer)
gi|157832006|pdb|1MMB|A Chain A, Complex Of Bb94 With The Catalytic Domain Of Matrix
Metalloproteinase-8
gi|224510629|pdb|3DNG|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A Non-
Zinc Chelating Inhibitor
gi|224510630|pdb|3DNG|B Chain B, Crystal Structure Of The Complex Between Mmp-8 And A Non-
Zinc Chelating Inhibitor
gi|224510635|pdb|3DPE|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A Non-
Zinc Chelating Inhibitor
gi|224510636|pdb|3DPF|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A Non-
Zinc Chelating Inhibitor
gi|224510637|pdb|3DPF|B Chain B, Crystal Structure Of The Complex Between Mmp-8 And A Non-
Zinc Chelating Inhibitor
Length = 163
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
+L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 1 MLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQG 55
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 56 E-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTSA 108
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 109 NYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG 163
>gi|395520440|ref|XP_003764338.1| PREDICTED: macrophage metalloelastase [Sarcophilus harrisii]
Length = 466
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 101/181 (55%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ +FP +P+W ++ L+Y +N + ++ K+AF W++V P++F
Sbjct: 92 EFSVFPNRPKWKKY---DLTYRI--KNYTPDISKAEVDYAIKKAFEVWSNVTPLTFKRIY 146
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F +GDHGD PFDG G LAH+++P G H D E W V G+
Sbjct: 147 AGE-ADIMISFASGDHGDFYPFDGSHGTLAHAYAPGPGIGGDAHFDEDEGWTV--GTN-- 201
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+L VA HE GH LGL HS +A+MYPT K D ++ L+ DDI+G+Q+LYG
Sbjct: 202 --GYNLFLVAAHEFGHSLGLHHSRDPQALMYPTYKGTDPRQFRLSQDDIKGIQSLYGGPV 259
Query: 227 N 227
N
Sbjct: 260 N 260
>gi|62897521|dbj|BAD96700.1| matrix metalloproteinase 7 preproprotein variant [Homo sapiens]
Length = 267
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLCAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|449269764|gb|EMC80515.1| Stromelysin-1, partial [Columba livia]
Length = 443
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 96/183 (52%), Gaps = 22/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G+P+W + V L+Y ++NY LH D+ A K+A + W+SV P+ FI+
Sbjct: 64 FSTFAGEPKWAKKV---LTY-----RILNYTPDLHPADVNAAIKKALNVWSSVTPLKFIK 115
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D D ADI I F H D PFDG G +AH+++P G H D ETW
Sbjct: 116 KDRGD-ADIMISFAARGHNDFIPFDGPGGSVAHAYAPGKDFGGDAHFDEDETWT------ 168
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
KS +L VA HE GH LGL HS A+MYP + D V L DDI G+Q LYG
Sbjct: 169 KSTEDTNLFYVAAHEFGHSLGLFHSKDPNALMYPVYRKSDPSVFPLHQDDINGIQHLYGP 228
Query: 225 NPN 227
+ N
Sbjct: 229 SSN 231
>gi|297690067|ref|XP_002822447.1| PREDICTED: interstitial collagenase isoform 2 [Pongo abelii]
Length = 403
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 142 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGPSQNP 200
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 201 VQPIGPQTPKVCDSKLTFD 219
>gi|395743149|ref|XP_002822184.2| PREDICTED: matrix metalloproteinase-26-like [Pongo abelii]
Length = 261
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFSKWASVIPVSFI 107
D + PG+ +W +H TL+Y +INY H + +K A S W++V P+ F
Sbjct: 89 DTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSTVKDSIYNAVSIWSNVTPLIFQ 140
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGS 164
+ + D ADI+I F+ H DG PFDG G+L H+F P SG H D E W+
Sbjct: 141 QVQNED-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWSA---- 195
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
S +L VA HEIGH LGL HS + ++MYPT D + L+ DDIQ +Q LYG
Sbjct: 196 --SDTGYNLFLVATHEIGHSLGLQHSGNRSSIMYPTYWYHDPRTFQLSADDIQRIQHLYG 253
>gi|334330415|ref|XP_001366724.2| PREDICTED: neutrophil collagenase-like [Monodelphis domestica]
Length = 472
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 21/183 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y + G P+W ++ ++Y+ +INY L D+ + ++AF W+ P+ F
Sbjct: 103 YQVTDGNPKWNKN---DITYS-----LINYTPDLPKADVDSAIEKAFQLWSHPTPLKFTR 154
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+D+ + ADI+I F G HGD PFDG G+LAH++ P G H D ETW+
Sbjct: 155 SDNNNEADIQISFARGAHGDNSPFDGESGILAHAYQPGRGIGGDAHFDEDETWS------ 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD-LALDDIQGVQALYGS 224
K +L VA HE GH LGL HS A+M+PT + L+ DDI G+Q LYG
Sbjct: 209 KGSRGTNLFLVAAHEFGHSLGLAHSSDPGALMFPTYSFSEPSTYVLSQDDINGIQFLYGQ 268
Query: 225 NPN 227
+ N
Sbjct: 269 SNN 271
>gi|449449423|ref|XP_004142464.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 313
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG+ +W + L+YA ++N + K + AF W +F E +
Sbjct: 148 YTFFPGRVKWPDSLNYRLTYA-----LVNNF-PEEFKESVRTAFEIWYGRSRFNFTEVSE 201
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
+ +IRI F G HGD PF LAH+F+P G+FH +A + ++VD A
Sbjct: 202 NEGGNIRISFERGVHGDYHPFTKNSKTLAHTFAPIDGRFHFNADKPFSVDVTYN----AY 257
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
L +VA+HE+GH GL HSP ++A+M+PT+ P + + DL +DDI+G+ LY
Sbjct: 258 HLRTVALHELGHAFGLAHSPSEDAIMFPTI-PTNLEKDLDMDDIEGLWELY 307
>gi|149716837|ref|XP_001498859.1| PREDICTED: matrilysin-like [Equus caballus]
Length = 267
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 90/177 (50%), Gaps = 15/177 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT +V + +E L + + + +A W+ IP+ F
Sbjct: 94 EYSLFPDSPKWTSNVVTYRVVSHPRE-----LSLVIVNQLVAKALKMWSEEIPLHFKRVS 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+FSP G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDPYPFDGPGNTLAHAFSPGPGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+ ++ A HE GH LGL HS AVMYPT + D K L+ DDI+G+Q LYG
Sbjct: 203 SIGINFLFAATHEFGHSLGLGHSSDPSAVMYPTYRDGDPKNFKLSRDDIKGIQKLYG 259
>gi|147900438|ref|NP_001083604.1| matrix metalloproteinase-28 b precursor [Xenopus laevis]
gi|38197301|gb|AAH61659.1| MGC68506 protein [Xenopus laevis]
Length = 497
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 87/157 (55%), Gaps = 12/157 (7%)
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGV 138
YL ++ K AF W++V ++F E D ADIR+ FY GDH DG FDG G
Sbjct: 132 YLSKHQVRQAVKAAFQLWSNVSSLTFSEALR-DPADIRLAFYEGDHNDGAGNAFDGPGGA 190
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
LAH+F P G+ H D+AE W++D +L V HEIGH LGL HS K A+M
Sbjct: 191 LAHAFFPRRGEAHFDSAEHWSLDGKGR------NLFVVLAHEIGHTLGLQHSSFKNALMS 244
Query: 199 PTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVE 235
P K +K L DD+ +Q LYG+ P+ G+LV+
Sbjct: 245 PYYKKLNKDYVLNFDDVLAIQNLYGAPPS---GNLVQ 278
>gi|11560008|ref|NP_071557.1| neutrophil collagenase precursor [Rattus norvegicus]
gi|5921827|sp|O88766.1|MMP8_RAT RecName: Full=Neutrophil collagenase; AltName: Full=Matrix
metalloproteinase-8; Short=MMP-8; Flags: Precursor
gi|3242321|emb|CAA07432.1| collagenase [Rattus norvegicus]
Length = 466
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N + ++K ++AF W+ ++F ET
Sbjct: 99 DFLLTPGSPKWT-HTNLT----YRIINHTPQMSKAEVKTEIEKAFKIWSVPSTLTFTETL 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ + ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 154 EGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDSEETWTQDSKN--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 210 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 266
Query: 227 N 227
N
Sbjct: 267 N 267
>gi|126327140|ref|XP_001366784.1| PREDICTED: interstitial collagenase [Monodelphis domestica]
Length = 469
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ + G P+W ++ + +S EN L D+ F++AF W+ V P++F +
Sbjct: 98 FAITEGNPKWDKN-----NLTYSIENYTPDLAREDVDDAFRKAFKVWSDVSPLTFTKISK 152
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI+I F DH D PFDG G+LAH+F P G H D E W D +
Sbjct: 153 GE-ADIKISFNYRDHYDNSPFDGPNGILAHAFQPGPGIGGDAHFDEEERWTKDHKN---- 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYPT D + L+ DDI G+QA+YG +N
Sbjct: 208 --YNLYHVAAHEFGHSLGLAHSSDIGALMYPTYGFNDLDNIQLSQDDIDGIQAIYGPSNN 265
Query: 226 PNFTIGSLVESDISTNLAVD 245
P GS L D
Sbjct: 266 PVQPTGSTTPKACDKKLTFD 285
>gi|114640096|ref|XP_508722.2| PREDICTED: interstitial collagenase isoform 3 [Pan troglodytes]
gi|410207854|gb|JAA01146.1| matrix metallopeptidase 1 (interstitial collagenase) [Pan
troglodytes]
gi|410251316|gb|JAA13625.1| matrix metallopeptidase 1 (interstitial collagenase) [Pan
troglodytes]
Length = 469
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ +AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIAKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFRE---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 210 --YNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKVCDSKLTFD 285
>gi|1514963|dbj|BAA11524.1| stromelysin-1/2-a [Cynops pyrrhogaster]
Length = 483
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y F G+P W R +T +M D+ +RAF W+ V P++F
Sbjct: 97 EYSHFGGRPTW-RTTSLTYRILGYTPDMAE----ADVDTAIRRAFKVWSDVTPLTFSRIY 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI+I F G HGD PFDG G LAH+F+P + G H D ETW GS
Sbjct: 152 E-GTADIQISFGAGVHGDFYPFDGPHGTLAHAFAPGNSIGGDAHFDEDETWTA--GS--- 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS + A+MYPT D + L DD+ G+QALYG++P
Sbjct: 206 -AGYNLFLVAAHEFGHSLGLSHSGDRSALMYPTYSYIDPARFRLPQDDVDGIQALYGASP 264
Query: 227 N 227
N
Sbjct: 265 N 265
>gi|344305616|ref|XP_003421486.1| PREDICTED: matrix metalloproteinase-26-like [Loxodonta africana]
Length = 258
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y + P + +W TL+Y +INY L + +K + + A S W+SV P+ F +
Sbjct: 91 YSVSPERLKWDED---TLTY-----RIINYPYGLKTSTVKDIMRAAVSIWSSVTPLVFEQ 142
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
DD D ADI+I F+ HGDG PFDG GVL H+F P S G H D E W+
Sbjct: 143 VDDRD-ADIKISFWALAHGDGLPFDGQGGVLGHAFLPHSETPGVVHFDKDEHWST----- 196
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
S ++L VA HE+GH LGL HS ++MYPT + +D + L+L+DI+ +Q LYG
Sbjct: 197 -SHRGINLFLVATHELGHALGLYHSGNPNSIMYPTYEYKDPRTFHLSLEDIRRIQHLYG 254
>gi|126352554|ref|NP_001075316.1| interstitial collagenase precursor [Equus caballus]
gi|8469206|sp|Q9XSZ5.1|MMP1_HORSE RecName: Full=Interstitial collagenase; AltName: Full=Matrix
metalloproteinase-1; Short=MMP-1; Flags: Precursor
gi|5020116|gb|AAD38030.1|AF148882_1 matrix metalloproteinase 1 precursor [Equus caballus]
Length = 469
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++VL G PRW L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 EFVLTEGNPRWEN---THLTYRI--ENYTPDLPRADVDQAIEKAFQLWSNVSPLTFTKVS 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDH D PFDG G LAH+F P G H D ETW +F +
Sbjct: 154 EGQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPRIGGDAHFDEDETWTSNFRN--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL+HS A+MYP V L+ DDI G+QA+YG N
Sbjct: 210 ---YNLYRVAAHEFGHSLGLSHSTDIGALMYPNYF-FTGDVQLSQDDINGIQAIYGPSQN 265
Query: 226 PNFTIGSLVESDISTNLAVD 245
P IG + L D
Sbjct: 266 PIQPIGPQTPEVCDSKLTFD 285
>gi|426367111|ref|XP_004050579.1| PREDICTED: matrix metalloproteinase-26 [Gorilla gorilla gorilla]
Length = 261
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSTVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI+I F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNED-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNRSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|114635797|ref|XP_508241.2| PREDICTED: matrix metalloproteinase-26 [Pan troglodytes]
Length = 261
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSTVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI+I F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNED-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNRSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|281341733|gb|EFB17317.1| hypothetical protein PANDA_011005 [Ailuropoda melanoleuca]
Length = 442
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 95/179 (53%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
YVL PRW H +T + EN L D+ + ++AF W++V P++F + +
Sbjct: 66 YVLTDRTPRW-EHTHLT----YRIENYTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFE 120
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D ETW D+ +
Sbjct: 121 GQ-ADIMISFVWGDHYDNSPFDGPNGNLAHAFPPGPNLGGDAHFDEDETWTNDYRN---- 175
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP D V L+ DDI +QA+YG +PN
Sbjct: 176 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYM-YDGDVQLSQDDISAIQAIYGPSPN 231
>gi|301773294|ref|XP_002922060.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
[Ailuropoda melanoleuca]
Length = 469
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 95/179 (53%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
YVL PRW H +T + EN L D+ + ++AF W++V P++F + +
Sbjct: 100 YVLTDRTPRW-EHTHLT----YRIENYTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D ETW D+ +
Sbjct: 155 GQ-ADIMISFVWGDHYDNSPFDGPNGNLAHAFPPGPNLGGDAHFDEDETWTNDYRN---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP D V L+ DDI +QA+YG +PN
Sbjct: 210 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYM-YDGDVQLSQDDISAIQAIYGPSPN 265
>gi|449520892|ref|XP_004167466.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 203
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y FPG+ +W + L+YA ++N + K + AF W +F E +
Sbjct: 38 YTFFPGRVKWPDSLNYRLTYA-----LVNNF-PEEFKESVRTAFEIWYGRSRFNFTEVSE 91
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
+ +IRI F G HGD PF LAH+F+P G+FH +A + ++VD A
Sbjct: 92 NEGGNIRISFERGVHGDYHPFTKNSKTLAHTFAPIDGRFHFNADKPFSVDVTYN----AY 147
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
L +VA+HE+GH GL HSP ++A+M+PT+ P + + DL +DDI+G+ LY
Sbjct: 148 HLRTVALHELGHAFGLAHSPSEDAIMFPTI-PTNLEKDLDMDDIEGLWELY 197
>gi|332837591|ref|XP_003313324.1| PREDICTED: interstitial collagenase isoform 1 [Pan troglodytes]
Length = 403
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ +AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIAKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 142 REYNLYRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 200
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 201 VQPIGPQTPKVCDSKLTFD 219
>gi|354467472|ref|XP_003496193.1| PREDICTED: neutrophil collagenase-like [Cricetulus griseus]
Length = 600
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 32 FKLKQSDKYDPAEATRHKK---------DYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
F L ++ K D A +K D++L PG P+WT H +T + N L
Sbjct: 72 FGLAETGKADAATLEMMRKPRCGVPDSGDFMLTPGSPKWT-HTNLT----YRIINCTPQL 126
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
+K ++AF W+ P++F E + ADI I F +HGD PFDG G+LAH+
Sbjct: 127 SKAAVKTAIEKAFQVWSVASPLTFTELSKGE-ADINIAFVPREHGDNSPFDGPNGILAHA 185
Query: 143 FSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D+ ETW D + +L VA HE GH LGL+HS A+MYP
Sbjct: 186 FQPGQGIGGDTHFDSEETWTQDSRN------YNLFLVAAHEFGHSLGLSHSSDPGALMYP 239
Query: 200 TLKPRDKKV-DLALDDIQGVQALYG 223
+ L DDI G+Q LYG
Sbjct: 240 NYAYSEPSTYSLPQDDINGIQTLYG 264
>gi|157831037|pdb|1FBL|A Chain A, Structure Of Full-Length Porcine Synovial Collagenase
(Mmp1) Reveals A C-Terminal Domain Containing A
Calcium-Linked, Four-Bladed Beta- Propeller
Length = 370
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PG PRW L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 1 FVLTPGNPRWEN---THLTYRI--ENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 56 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRD---- 110
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG + N
Sbjct: 111 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-YTGDVQLSQDDIDGIQAIYGPSEN 166
>gi|118138582|pdb|2J0T|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
Complex With The Inhibitory Domain Of Timp-1
gi|118138583|pdb|2J0T|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
Complex With The Inhibitory Domain Of Timp-1
gi|118138584|pdb|2J0T|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
Complex With The Inhibitory Domain Of Timp-1
Length = 170
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 2 VLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEG 56
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 57 Q-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------R 109
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 110 EYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQN 166
>gi|449520894|ref|XP_004167467.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 197
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 24/185 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKR----AFSKWASVIPVSFI 107
+ FPG+P+W +L+++F I + +FK AF W F
Sbjct: 32 FKFFPGRPKWPDSKNYSLTFSF----------INNFPGIFKGEVGDAFLAWYERSRFFFT 81
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKS 167
E + + +DI+I F GDHGDG PF +GVLAH+F+P G+ H + E F SE +
Sbjct: 82 EVPEGEESDIKISFEVGDHGDGHPF--RVGVLAHAFTPTDGRLHFNGDEP----FSSEVA 135
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ SVA+HE+GH LGL H+ + +A+MYPTL P K + DD+ G+ ALY N
Sbjct: 136 EGKYHVRSVALHELGHSLGLAHTEILDAIMYPTLPPNFAK-SINSDDVNGLWALYD---N 191
Query: 228 FTIGS 232
F IG
Sbjct: 192 FHIGG 196
>gi|344287952|ref|XP_003415715.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
[Loxodonta africana]
Length = 528
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ + ++AF W+ V P+ F + +
Sbjct: 162 FVLTDGNPRWEK---THLTYRI--ENYTPDLPQADVDSAIEKAFQLWSDVTPLKFTKVFE 216
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
D ADI I F GDH D PFDG G LAH+F P G H D E W + +
Sbjct: 217 -DQADIMISFVWGDHRDNSPFDGPGGNLAHAFQPGPGIGGDVHFDEDEGWTNNLRN---- 271
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP V L+ DD+ G+QA+YG SNP
Sbjct: 272 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYF-FTGDVQLSQDDVNGIQAIYGPSSNP 328
Query: 227 NFTIGSLVESDISTNLAVD 245
N I + L D
Sbjct: 329 NKPIAPQTPQACDSKLTFD 347
>gi|351709969|gb|EHB12888.1| Macrophage metalloelastase [Heterocephalus glaber]
Length = 403
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 95/175 (54%), Gaps = 20/175 (11%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG+ W +H + +N + D+ V ++AF W+ V P+ F + + A
Sbjct: 38 PGRQVWRKHF-----ITYRIKNYTPDMRHQDVDDVIQKAFQVWSDVTPLKFRKIN-VGKA 91
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F GDHGD FDG G+LAH+F P S G H D AETW+ K+ +
Sbjct: 92 DIMIVFAYGDHGDFNSFDGRGGILAHAFGPGSGIGGDTHFDEAETWS------KTSTGTN 145
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPT---LKPRDKKVDLALDDIQGVQALYGS 224
L VAVHEIGH LGL HS ++A+M+P+ L P L+ DDI+G+Q+LYG
Sbjct: 146 LFLVAVHEIGHSLGLHHSSDRKAIMFPSYGYLNP--NTFQLSADDIRGIQSLYGG 198
>gi|5542534|pdb|3AYK|A Chain A, Catalytic Fragment Of Human Fibroblast Collagenase
Complexed With Cgs-27023a, Nmr, Minimized Average
Structure
gi|5542566|pdb|4AYK|A Chain A, Catalytic Fragment Of Human Fibroblast Collagenase
Complexed With Cgs-27023a, Nmr, 30 Structures
gi|157830144|pdb|1AYK|A Chain A, Inhibitor-Free Catalytic Fragment Of Human Fibroblast
Collagenase, Nmr, 30 Structures
gi|157831323|pdb|1HFC|A Chain A, 1.56 Angstrom Structure Of Mature Truncated Human
Fibroblast Collagenase
gi|157834633|pdb|2AYK|A Chain A, Inhibitor-Free Catalytic Fragment Of Human Fibroblast
Collagenase, Nmr, Minimized Average Structure
gi|157836376|pdb|2TCL|A Chain A, Structure Of The Catalytic Domain Of Human Fibroblast
Collagenase Complexed With An Inhibitor
gi|999357|gb|AAB34887.1| truncated mature collagenase, mCL-t [human, fibroblast, Peptide
Recombinant Partial, 169 aa]
Length = 169
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 1 VLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEG 55
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 56 Q-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------R 108
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 109 EYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQN 165
>gi|4505219|ref|NP_002414.1| matrilysin preproprotein [Homo sapiens]
gi|116861|sp|P09237.1|MMP7_HUMAN RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|35799|emb|CAA30678.1| unnamed protein product [Homo sapiens]
gi|35803|emb|CAA77942.1| PUMP [Homo sapiens]
gi|54781375|gb|AAV40839.1| matrix metalloproteinase 7 (matrilysin, uterine) [Homo sapiens]
gi|119587427|gb|EAW67023.1| matrix metallopeptidase 7 (matrilysin, uterine) [Homo sapiens]
Length = 267
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|153791308|ref|NP_001093408.1| macrophage metalloelastase precursor [Sus scrofa]
gi|149693281|emb|CAO00953.1| Mmp12 protein [Sus scrofa]
Length = 466
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 25/210 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+++ PG+P W +H L+Y + N + D+ ++AF W++V P+ F + D
Sbjct: 99 NFMFMPGRPVWKKHF---LTYRIN--NYTPDMRPKDVDYAIQKAFQAWSNVTPLKFRKID 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F G+HGD FDG GVLAH+F+P G H D AE W K+
Sbjct: 154 AGE-ADIMIKFALGEHGDFNSFDGQGGVLAHAFAPGPGIGGDAHFDEAEIWT------KN 206
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG---- 223
+L VA+HE+GH LGL HS A+M+P + L+ DDI+G+Q+LYG
Sbjct: 207 NKGTNLFLVALHELGHSLGLGHSNDPTAIMFPYIN--YNSFHLSADDIRGIQSLYGPPEK 264
Query: 224 ----SNPNFTIGSLVESDISTNLAVDLRIK 249
SNP+ + + + ++S + +R K
Sbjct: 265 HQPSSNPDSSDPAACDPNLSFDAVTTVRDK 294
>gi|61368429|gb|AAX43178.1| matrix metalloproteinase 7 [synthetic construct]
gi|61369114|gb|AAX43287.1| matrix metalloproteinase 7 [synthetic construct]
Length = 268
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|348021|gb|AAC37543.1| matrilysin [Homo sapiens]
gi|13177712|gb|AAH03635.1| Matrix metallopeptidase 7 (matrilysin, uterine) [Homo sapiens]
gi|60816397|gb|AAX36381.1| matrix metalloproteinase 7 [synthetic construct]
gi|60817901|gb|AAX36443.1| matrix metalloproteinase 7 [synthetic construct]
gi|61358328|gb|AAX41549.1| matrix metalloproteinase 7 [synthetic construct]
gi|61358920|gb|AAX41641.1| matrix metalloproteinase 7 [synthetic construct]
gi|123992912|gb|ABM84058.1| matrix metallopeptidase 7 (matrilysin, uterine) [synthetic
construct]
gi|157928550|gb|ABW03571.1| matrix metallopeptidase 7 (matrilysin, uterine) [synthetic
construct]
gi|261860302|dbj|BAI46673.1| matrix metallopeptidase 7 [synthetic construct]
Length = 267
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|339259036|ref|XP_003369704.1| matrix metalloproteinase-20 [Trichinella spiralis]
gi|316965930|gb|EFV50566.1| matrix metalloproteinase-20 [Trichinella spiralis]
Length = 293
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 87 IKAVFKRAFSKW--ASVIPVSFIETDD-YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSF 143
++ RAF++W AS + F E ++ A I I F +GDH D PFDG+ GV+AH F
Sbjct: 137 VRTTLHRAFNEWSEASQKALKFKENENSTGLAHINIFFAHGDHNDSLPFDGMAGVVAHGF 196
Query: 144 SPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
P +G H DAAE W + + ++L AVHEIGHLLGL HS AVM+P +P
Sbjct: 197 YPTNGNLHFDAAEHWTLHMDN-----GINLFQTAVHEIGHLLGLEHSTDYNAVMFPINRP 251
Query: 204 RDKKVDLALDDIQGVQALYG 223
D L DDI+G++ LY
Sbjct: 252 YDPMFRLGDDDIRGIRYLYA 271
>gi|115496540|ref|NP_001068598.1| matrilysin precursor [Bos taurus]
gi|109939761|gb|AAI18076.1| Matrix metallopeptidase 7 (matrilysin, uterine) [Bos taurus]
Length = 267
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 91/177 (51%), Gaps = 15/177 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ LFP P+WT V +++ + HIT + + +AF W+ IP++F
Sbjct: 94 EFSLFPNHPKWTSKVVTYRIMSYTSD----LPHIT-VNQLVAKAFKIWSEAIPLTFKRLR 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF HGD PFDG LAH+F+P G H D E W G
Sbjct: 149 -WGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDERWTDGIG---- 203
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+ V+ VA HE+GH LGL+HS AVMYPT D K L+ DDI G+Q LYG
Sbjct: 204 -IGVNFLYVATHELGHSLGLSHSSDPNAVMYPTYSKEDSKNFKLSQDDINGIQLLYG 259
>gi|60207645|gb|AAX14806.1| collagenase [Notophthalmus viridescens]
Length = 469
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 96/183 (52%), Gaps = 22/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y + PG P W +H +T ++NY + D+ A +RA + WA V P++F
Sbjct: 99 YSITPGNPVW-KHTEITY-------RILNYTPDMAKADVDAAIQRALNVWADVTPLTFTR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ ADI+I F GDH D PFDG G+LAH+F P G H D E W GSE
Sbjct: 151 LYE-GTADIQISFAAGDHRDNSPFDGPDGLLAHAFEPGRGIGGDAHFDEDERWTK--GSE 207
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
+ +L +A HE GH LGL+HS A+MYPT D + L DDI G+Q+LYG
Sbjct: 208 R----YNLFLMAAHEFGHSLGLSHSNDPGALMYPTYSSTDPDEFRLPQDDINGIQSLYGE 263
Query: 225 NPN 227
+ N
Sbjct: 264 SKN 266
>gi|308462987|ref|XP_003093772.1| hypothetical protein CRE_24781 [Caenorhabditis remanei]
gi|308249378|gb|EFO93330.1| hypothetical protein CRE_24781 [Caenorhabditis remanei]
Length = 281
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD----DYDFA 115
RW +H TL++ +N+++ + ++ RAF++W++V + F E
Sbjct: 48 RWRKH---TLTWQLQTQNLMD-ADVYIVRNTMHRAFNEWSTVSSLEFREIPPELVTKQPP 103
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLES 175
DI I F G+H DG PFDG GV+AH+F P G+ H DA E W+++ S V+L
Sbjct: 104 DIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFDAEEQWSLN-----SQEGVNLFQ 158
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
AVHEIGHLLGL HS A M+ +P D L DD++ +++L+
Sbjct: 159 TAVHEIGHLLGLEHSMDIRAAMFAAKRPYDPAFTLGDDDVRAIRSLF 205
>gi|62897629|dbj|BAD96754.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 390
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 21 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 75
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+ P G H D E W +F
Sbjct: 76 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHACQPGPGIGGDAHFDEDERWTNNFRE---- 130
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 131 --YNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 187
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 188 VQPIGPQTPKACDSKLTFD 206
>gi|296480357|tpg|DAA22472.1| TPA: matrix metalloproteinase 7 [Bos taurus]
Length = 267
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 91/177 (51%), Gaps = 15/177 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ LFP P+WT V +++ + HIT + + +AF W+ IP++F
Sbjct: 94 EFSLFPNHPKWTSKVVTYRIMSYTSD----LPHIT-VNQLVAKAFKIWSEAIPLTFKRLR 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF HGD PFDG LAH+F+P G H D E W G
Sbjct: 149 -WGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDERWTDGIG---- 203
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+ V+ VA HE+GH LGL+HS AVMYPT D K L+ DDI G+Q LYG
Sbjct: 204 -IGVNFLYVATHELGHSLGLSHSSDPNAVMYPTYSKEDSKNFKLSQDDINGIQLLYG 259
>gi|19424154|ref|NP_598198.1| stromelysin-2 precursor [Rattus norvegicus]
gi|116870|sp|P07152.1|MMP10_RAT RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transformation-associated protein 34A; AltName:
Full=Transin-2; Flags: Precursor
gi|57389|emb|CAA28739.1| unnamed protein product [Rattus norvegicus]
gi|207151|gb|AAA42202.1| transformation-associated protein [Rattus norvegicus]
Length = 476
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ +SY ++NY L + + +RA W V P++F
Sbjct: 100 FSTFPGSPKWRKN---HISY-----RIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDGV LAH++ P G + H D E W++
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDDEKWSL----- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK--PRDKKVDLALDDIQGVQALYG 223
P +L VA HE+GH LGL HS KE++MYP + + L+ DDI+G+Q+LYG
Sbjct: 206 -GPSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIEGIQSLYG 264
Query: 224 SNPN 227
+ P+
Sbjct: 265 ARPS 268
>gi|373428619|gb|AEY69044.1| matrix metalloproteinase [Thamnodynastes strigatus]
Length = 287
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 96/193 (49%), Gaps = 24/193 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y FPG+P W H +T ++NY L + I F RAF W++V P++F
Sbjct: 96 YTTFPGRPTWD-HTDLTY-------RVVNYSPDLDVASIDDAFSRAFGMWSNVAPLTFTR 147
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES----GKFHLDAAETWAVDFGS 164
+ + DI I F + +HGD PFDG GVLAH+F P + G H D E W G+
Sbjct: 148 QEQGN-VDILIQFGSQNHGDSYPFDGKNGVLAHAFGPGTYSINGDAHFDEDEFWTQGGGN 206
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG- 223
S L VA HE GH LGL HS ++ A+MYPT + L DD+ G+Q LYG
Sbjct: 207 GYS-----LFIVAAHEFGHSLGLDHSSIQGALMYPTYS-YQANLQLHSDDVAGIQDLYGQ 260
Query: 224 -SNPNFTIGSLVE 235
+ P G L
Sbjct: 261 RAGPQSDSGRLAR 273
>gi|114793614|pdb|2CLT|A Chain A, Crystal Structure Of The Active Form (Full-Length) Of
Human Fibroblast Collagenase.
gi|114793615|pdb|2CLT|B Chain B, Crystal Structure Of The Active Form (Full-Length) Of
Human Fibroblast Collagenase.
gi|394986238|pdb|4AUO|A Chain A, Crystal Structure Of Mmp-1(E200a) In Complex With A
Triple- Helical Collagen Peptide
gi|394986239|pdb|4AUO|B Chain B, Crystal Structure Of Mmp-1(E200a) In Complex With A
Triple- Helical Collagen Peptide
Length = 367
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 1 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 56 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA H +GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 109 REYNLHRVAAHALGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 167
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 168 VQPIGPQTPKACDSKLTFD 186
>gi|149020726|gb|EDL78531.1| rCG31835 [Rattus norvegicus]
Length = 476
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ +SY ++NY L + + +RA W V P++F
Sbjct: 100 FSTFPGSPKWRKN---HISY-----RIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDGV LAH++ P G + H D E W++
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDDEKWSL----- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK--PRDKKVDLALDDIQGVQALYG 223
P +L VA HE+GH LGL HS KE++MYP + + L+ DDI+G+Q+LYG
Sbjct: 206 -GPSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIEGIQSLYG 264
Query: 224 SNPN 227
+ P+
Sbjct: 265 ARPS 268
>gi|17555226|ref|NP_498599.1| Protein T21D11.1 [Caenorhabditis elegans]
gi|8650109|gb|AAF78096.1| MMP-like protein [Caenorhabditis elegans]
gi|373218595|emb|CCD61839.1| Protein T21D11.1 [Caenorhabditis elegans]
Length = 279
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 13/170 (7%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD----DYDFA 115
RW +H TL++ +N+++ + ++ RAF++W++V V F E
Sbjct: 48 RWKKH---TLTWQLQTQNLLD-PDVFIVRNTMHRAFNEWSTVSSVDFREIPPDLVTKQPP 103
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLES 175
DI I F G+H DG PFDG GV+AH+F P G+ H DA E W+++ S V+L
Sbjct: 104 DIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFDAEEQWSLN-----SVEGVNLFQ 158
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
AVHEIGHLLGL HS A M+ +P D L DD++ +++L+ N
Sbjct: 159 TAVHEIGHLLGLEHSMDVRAAMFAAKRPYDPAFTLGDDDVRAIRSLFPIN 208
>gi|397496490|ref|XP_003819068.1| PREDICTED: matrix metalloproteinase-26 [Pan paniscus]
Length = 261
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSAVKDSIYYAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI+I F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNED-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNRSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|326914432|ref|XP_003203529.1| PREDICTED: interstitial collagenase-like [Meleagris gallopavo]
Length = 466
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 94/181 (51%), Gaps = 22/181 (12%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ YV G P+W + L+Y ++NY + TD+ ++A + W+SV P++F
Sbjct: 98 EQYVFTTGNPKWKK---TNLTY-----RIVNYTRKMRQTDVDEAIQKALNVWSSVTPLTF 149
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFG 163
+D ADI I F DH D PFDG G+LAH+F P G H+D ETW
Sbjct: 150 QRIED-KIADIMISFAYRDHNDNSPFDGPGGLLAHAFQPGEGLGGDVHMDEEETWT---- 204
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
K +L V HE+GH LGL+HS A+MYP D K+ L DDI G+QA+Y
Sbjct: 205 --KDGRGYNLFIVVAHELGHSLGLSHSNDPGALMYPNYAYTDPKEFLLPQDDIDGIQAIY 262
Query: 223 G 223
G
Sbjct: 263 G 263
>gi|443689207|gb|ELT91654.1| hypothetical protein CAPTEDRAFT_219025 [Capitella teleta]
Length = 529
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSP 145
+ F +AF W+ V P++F ET + ADI I F G H DG FDG G LAH+F P
Sbjct: 166 RRAFHKAFQYWSDVTPLTFAETGASE-ADIDIQFARGQHSDGPGNAFDGPGGTLAHAFFP 224
Query: 146 ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
E+G H D E W ++ + +LE VA HE GH LGL HS V+ A+M P + D
Sbjct: 225 ENGDTHFDEDEDW-----TQNTETGTNLEIVAAHEFGHALGLGHSNVRGALMAPYYQGYD 279
Query: 206 KKVDLALDDIQGVQALYGSN 225
L DD++ +Q+LYGSN
Sbjct: 280 PNFSLHDDDVRAIQSLYGSN 299
>gi|149716844|ref|XP_001498924.1| PREDICTED: macrophage metalloelastase-like [Equus caballus]
Length = 470
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 17 IHESPQCIAVRSTPKFKLKQSDK-YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSK 75
I E Q + ++ T + D + P D+ + G+P W +H +
Sbjct: 65 IQEMQQFLGLKVTGQLDTATLDMMHRPRCGVPDVYDFRVMQGRPVWKKHF-----ITYRI 119
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
+N + D+ ++AF W+ V P+ F + + + ADI I F +G HGD PFDG
Sbjct: 120 KNYTPDMKPEDVDYAIQKAFQVWSDVTPLKFRKINTGE-ADIMIQFAHGAHGDYSPFDGR 178
Query: 136 LGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
G+LAH+F P G H D AE W KS +L VAVHE+GH LGL HS
Sbjct: 179 NGILAHAFGPGPGIGGDTHFDEAEIWT------KSYKGTNLFLVAVHELGHSLGLGHSHD 232
Query: 193 KEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
+A+M+PT D L+ DDI+G+Q+LYG+
Sbjct: 233 PKAIMFPTYSYIDLSTFRLSADDIRGIQSLYGA 265
>gi|423554697|ref|ZP_17531022.1| hypothetical protein IGW_05326 [Bacillus cereus ISP3191]
gi|401179686|gb|EJQ86851.1| hypothetical protein IGW_05326 [Bacillus cereus ISP3191]
Length = 262
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 18/170 (10%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
RW ++ L+Y F N + L +I++ AF W+ V P++F E + ADI I
Sbjct: 100 RWNKN---DLTYKFV--NFTSDLTEEEIRSGIATAFGLWSQVTPLTFTEVTSNN-ADILI 153
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE------SGKFHLDAAETWAVDFGSEKSPVAVDL 173
F GDHGDG+PFDG VLAH++ P +G H D +ETW+++ P DL
Sbjct: 154 SFVTGDHGDGDPFDGAGNVLAHAYYPPPNGGEIAGDAHFDDSETWSMNL----PPSGFDL 209
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
SVA HE GH LGL HS V A+M+ + + L DDI G+Q++YG
Sbjct: 210 ISVAAHEFGHSLGLDHSTVPGALMFSSYSGPQRA--LHEDDIAGIQSIYG 257
>gi|297690056|ref|XP_002822443.1| PREDICTED: matrilysin [Pongo abelii]
Length = 267
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDAYPFDGPGNTLAHAFAPGKGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQHFKLSQDDIKGIQKLYGKKS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|199652449|gb|ACH91676.1| matrix metallopeptidase 1 [Sus scrofa]
Length = 469
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++VL PG PRW L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 EFVLTPGNPRWEN---THLTYRI--ENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GD+ D PFDG G LAH+F P G H D E W +F
Sbjct: 154 EGQ-ADIMISFVRGDNRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRD--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG + N
Sbjct: 210 ---YNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-YTGDVQLSQDDIDGIQAIYGPSEN 265
>gi|8843950|gb|AAF80180.1| matrix metalloproteinase MMP-26 [Homo sapiens]
Length = 261
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSAVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI++ F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNGD-ADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|397516426|ref|XP_003828431.1| PREDICTED: matrilysin [Pan paniscus]
Length = 267
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPHSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|449269765|gb|EMC80516.1| Interstitial collagenase, partial [Columba livia]
Length = 433
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 22/181 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
YV PG P+W R+ L+Y ++NY + D+ ++A S W++V P++F +
Sbjct: 67 YVFTPGNPKWKRN---DLTY-----RILNYTPKMRQADVDEAIRKALSVWSNVTPLTFRK 118
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+D + ADI I F DH D PFDG G LAH+F P G HLD E W
Sbjct: 119 VEDKE-ADIVISFAYRDHRDNSPFDGPNGQLAHAFQPGEGIGGDVHLDEEEAWT------ 171
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
K +L V HE+GH LGL+HS A+MYPT D + L DDI G+QA+YG
Sbjct: 172 KDGRGYNLFIVIAHELGHSLGLSHSNDPGALMYPTYSYTDPNEFLLPQDDIDGIQAIYGQ 231
Query: 225 N 225
+
Sbjct: 232 S 232
>gi|73808266|ref|NP_068573.2| matrix metalloproteinase-26 preproprotein [Homo sapiens]
gi|13629493|sp|Q9NRE1.2|MMP26_HUMAN RecName: Full=Matrix metalloproteinase-26; Short=MMP-26; AltName:
Full=Endometase; AltName: Full=Matrilysin-2; Flags:
Precursor
gi|9937495|gb|AAG02470.1| matrix metalloproteinase-26 [Homo sapiens]
gi|10185070|emb|CAC08821.1| matrilysin-2 [Homo sapiens]
gi|75516560|gb|AAI01544.1| Matrix metallopeptidase 26 [Homo sapiens]
gi|75517698|gb|AAI01542.1| Matrix metallopeptidase 26 [Homo sapiens]
gi|119589223|gb|EAW68817.1| matrix metallopeptidase 26 [Homo sapiens]
Length = 261
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSAVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI++ F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNGD-ADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|27806541|ref|NP_776537.1| interstitial collagenase precursor [Bos taurus]
gi|116851|sp|P28053.1|MMP1_BOVIN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
collagenase; AltName: Full=Matrix metalloproteinase-1;
Short=MMP-1; Flags: Precursor
gi|260|emb|CAA41210.1| preprocollagenase [Bos taurus]
Length = 469
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PGK W L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTPGKSCWEN---TNLTYRI--ENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P + G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQD---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE GH LGL HS A+MYP+ V L+ DDI G+QA+YG NP
Sbjct: 210 --YNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLSQDDIDGIQAIYGPSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
+G + L D
Sbjct: 267 TQPVGPQTPEVCDSKLTFD 285
>gi|291383997|ref|XP_002708619.1| PREDICTED: matrilysin-like [Oryctolagus cuniculus]
Length = 273
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPM--TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
+Y P P+WT V +SY F +N L + + +AF+ W+ IP+ F
Sbjct: 97 EYSPLPSSPKWTSRVVTYRIVSYPFPTQN----LSPVRVDQIVAKAFNLWSKEIPLHFKR 152
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
ADI IGF G HGD PFDG LAH+F P G H D E W ++
Sbjct: 153 LR-LGIADIMIGFARGAHGDASPFDGPGNTLAHAFPPGPGLGGDAHFDKDEHW-----TD 206
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
S + ++ VA HE+GH LGL HS AVMYPT + D + L DDI+G+Q LYG
Sbjct: 207 GSSLGINFLYVATHELGHSLGLDHSSDPNAVMYPTYEHVDSQNFKLGQDDIEGIQKLYGE 266
Query: 225 N 225
Sbjct: 267 R 267
>gi|9022385|gb|AAF82359.1|AF248646_1 matrix metalloproteinase-26 precursor [Homo sapiens]
gi|9837566|gb|AAG00603.1|AF291664_1 matrix metalloproteinase-26 [Homo sapiens]
Length = 261
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSAVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI++ F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNGD-ADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|355702774|gb|AES02044.1| matrix metallopeptidase 12 [Mustela putorius furo]
Length = 481
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG+P W + + ++Y + N + ++ ++AF W+ V P+ F + + + A
Sbjct: 117 PGRPVWRKRL---ITYRIN--NYTPDMRPAEVDFAIQKAFQVWSDVTPLKFRKINSGE-A 170
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F +G HGD PFDG GV+AH+F P G H D AE W KS +
Sbjct: 171 DIMILFASGAHGDYSPFDGRGGVIAHAFGPALGIGGDAHFDEAEIWT------KSYRGTN 224
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL+HS + A+M+PT D LA DDI G+Q+LYG
Sbjct: 225 LFLVAVHELGHSLGLSHSNDRNAIMFPTYSYVDPNTFRLAADDIHGIQSLYGC 277
>gi|126030231|pdb|2DDY|A Chain A, Solution Structure Of Matrilysin (Mmp-7) Complexed To
Constraint Conformational Sulfonamide Inhibitor
Length = 173
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 1 YSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV- 54
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 55 WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGSS 109
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPN 227
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG N
Sbjct: 110 LGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSN 169
>gi|405975214|gb|EKC39795.1| Matrix metalloproteinase-19 [Crassostrea gigas]
Length = 442
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
N L + + F AF+KW+SV P+ F E D ADI I F DHGDG PFDG G L
Sbjct: 124 NPLSQSQHRRAFINAFNKWSSVSPLRFREVASGD-ADIIIDFKRYDHGDGSPFDGRSGTL 182
Query: 140 AHSFSPE----SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
AH+F P SG H D E W + + +LE VA HE GH LGL+HS EA
Sbjct: 183 AHAFFPGTSAISGDTHFDDDEKWTMG-----TSEGTNLEIVAAHEFGHALGLSHSSTPEA 237
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALY 222
+M P + D L DDI+G+Q+LY
Sbjct: 238 LMAPYYQGYDPNYKLHNDDIRGIQSLY 264
>gi|288557361|ref|NP_001165700.1| matrix metalloproteinase-28 a precursor [Xenopus laevis]
gi|122894094|gb|ABM67693.1| matrix metalloproteinase-28 [Xenopus laevis]
Length = 496
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 20 SPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMI 79
P+C V+ KL +S + R +K + K + +H+ + N
Sbjct: 83 QPRC-GVKDIESLKLVKSHHHG-----RQRKKRYISKSKKWYKQHLTYQIV------NWP 130
Query: 80 NYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLG 137
YL ++ K AF W++V ++F E D ADIR+ F++GDH DG FDG G
Sbjct: 131 WYLSQHQVRQAVKAAFQLWSNVSSLTFSEALR-DPADIRLAFFDGDHNDGAGNAFDGPGG 189
Query: 138 VLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
LAH+F P G+ H D+AE W+++ +L V HEIGH LGL HS K A+M
Sbjct: 190 ALAHAFFPRRGEAHFDSAEHWSLNGKGR------NLFVVLAHEIGHTLGLPHSSFKNALM 243
Query: 198 YPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVE 235
P K +K L DD+ +Q LYG+ P+ G+LV+
Sbjct: 244 SPYYKKLNKDYVLNFDDVLAIQNLYGAPPS---GNLVQ 278
>gi|1431757|pdb|1MMP|A Chain A, Matrilysin Complexed With Carboxylate Inhibitor
gi|1431758|pdb|1MMP|B Chain B, Matrilysin Complexed With Carboxylate Inhibitor
gi|157832012|pdb|1MMQ|A Chain A, Matrilysin Complexed With Hydroxamate Inhibitor
gi|157832013|pdb|1MMR|A Chain A, Matrilysin Complexed With Sulfodiimine Inhibitor
Length = 170
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 1 YSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV- 54
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 55 WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGSS 109
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPN 227
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG N
Sbjct: 110 LGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSN 169
>gi|351709962|gb|EHB12881.1| Matrilysin [Heterocephalus glaber]
Length = 265
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LF KP+WT +V +++ + L + + +A S W+ IP+SF
Sbjct: 95 YSLFTNKPKWTSNVITYRIISYTSD-----LPRIKVDEIVAKALSLWSKEIPLSFRRIR- 148
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI IGF G HGD PFDG +LAH+F P G H D E W ++ S
Sbjct: 149 FGTADIEIGFARGAHGDFNPFDGPGNILAHAFPPGPGLGGDVHFDKDEYW-----TDGSS 203
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPN 227
+ + A HE+GH LGL+HS AVMYPT + D + LA DD++ +Q LYG+ N
Sbjct: 204 LGNNFLYAATHELGHSLGLSHSNNPNAVMYPTYEIADFQSFKLARDDVESIQELYGNIYN 263
Query: 228 F 228
F
Sbjct: 264 F 264
>gi|423362617|ref|ZP_17340118.1| hypothetical protein IC1_04595 [Bacillus cereus VD022]
gi|401077216|gb|EJP85557.1| hypothetical protein IC1_04595 [Bacillus cereus VD022]
Length = 258
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 20/172 (11%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+W ++ L+Y F K + L ++++ +AFS W+ V P++F E D ADI I
Sbjct: 98 KWNKN---NLTYKFVK--FTSDLSKDEVRSAIAKAFSLWSEVTPLTFEEVT-TDNADILI 151
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE------SGKFHLDAAETWAVDFGSEKSPVA-VD 172
F G+HGD PFDG VLAH++ P +G H D ETW++ +P + +D
Sbjct: 152 SFVTGEHGDNNPFDGNGNVLAHAYFPPPNSGSLAGDAHFDDGETWSI-----STPTSGID 206
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
L +VA HE GH LGL+HS V+ ++M+P+ + L DDI G+Q++YGS
Sbjct: 207 LITVAAHEFGHSLGLSHSKVRGSLMFPSYSGILRS--LHQDDISGIQSIYGS 256
>gi|332138104|pdb|2Y6D|A Chain A, The Discovery Of Mmp7 Inhibitors Exploiting A Novel
Selectivity Trigger
Length = 174
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 2 YSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV- 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 56 WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGSS 110
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPN 227
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG N
Sbjct: 111 LGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSN 170
>gi|395520411|ref|XP_003764326.1| PREDICTED: matrilysin [Sarcophilus harrisii]
Length = 261
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 15/177 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ LFPG+P+W +V +++++ L + + + ++A W+ ++F +
Sbjct: 93 EFTLFPGRPKWPSNVVTYRILSYTQD-----LPRSTVDHLVEKALDMWSKASTLTFKKVR 147
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG G+LAH+F+P G H D E W ++ S
Sbjct: 148 RGN-ADILIGFARGAHGDFNPFDGAGGILAHAFAPGIDLGGDAHFDNDEQW-----TDGS 201
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+ ++ A HE+GH LGL HS +AVMYPT ++ K L+ DDI+G+Q LYG
Sbjct: 202 KLGINFLFAATHELGHSLGLGHSSDPDAVMYPTYSYKNPKDFGLSPDDIRGIQKLYG 258
>gi|1000037|pdb|1CGL|A Chain A, Structure Of The Catalytic Domain Of Fibroblast
Collagenase Complexed With An Inhibitor
gi|1000038|pdb|1CGL|B Chain B, Structure Of The Catalytic Domain Of Fibroblast
Collagenase Complexed With An Inhibitor
Length = 169
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 90/178 (50%), Gaps = 16/178 (8%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDY 112
VL G PRW + L Y EN L D+ ++AF W+ V P++F + +
Sbjct: 1 VLTEGNPRWEQ---THLRYRI--ENYTPDLPRADVDHAIEKAFQLWSDVTPLTFTKVSEG 55
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPV 169
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 56 Q-ADIMISFVRGDHRDNSPFDGPGGNLAHAFDPGPGIGGDAHFDEDERWTNNF------R 108
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 109 EYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQN 165
>gi|255958234|ref|NP_001157647.1| matrix metalloproteinase 1 isoform 2 precursor [Tribolium
castaneum]
Length = 550
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Query: 62 TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGF 121
+R L+Y SK L+ ++ RAFS W+ ++F T A I I F
Sbjct: 108 SRWKVKNLNYKISK--YPKNLNTKEVDKEIHRAFSVWSQYTDLTF--TPSKGSAHIEIRF 163
Query: 122 YNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
+G+HGDG+PFDG G LAH++ P G H DA+E W ++ S +L VA HE
Sbjct: 164 ESGEHGDGDPFDGPGGTLAHAYFPVFGGDAHFDASEKWTIN-----SYRGTNLFQVAAHE 218
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
GH LGL+HS V+EA+M P + D +L DDIQG+QALYG
Sbjct: 219 FGHSLGLSHSDVREALMAPFYRGYDPLFELHEDDIQGIQALYG 261
>gi|255958232|ref|NP_001157646.1| matrix metalloproteinase 1 isoform 1 precursor [Tribolium
castaneum]
gi|270008219|gb|EFA04667.1| matrix metalloproteinase 1 [Tribolium castaneum]
Length = 581
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 88/157 (56%), Gaps = 10/157 (6%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG 127
L+Y SK L+ ++ RAFS W+ ++F T A I I F +G+HG
Sbjct: 114 NLNYKISK--YPKNLNTKEVDKEIHRAFSVWSQYTDLTF--TPSKGSAHIEIRFESGEHG 169
Query: 128 DGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLG 186
DG+PFDG G LAH++ P G H DA+E W ++ S +L VA HE GH LG
Sbjct: 170 DGDPFDGPGGTLAHAYFPVFGGDAHFDASEKWTIN-----SYRGTNLFQVAAHEFGHSLG 224
Query: 187 LTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
L+HS V+EA+M P + D +L DDIQG+QALYG
Sbjct: 225 LSHSDVREALMAPFYRGYDPLFELHEDDIQGIQALYG 261
>gi|440902967|gb|ELR53691.1| Matrilysin [Bos grunniens mutus]
Length = 267
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 89/177 (50%), Gaps = 15/177 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ LFP P+WT V +++ + L + + +AF W+ IP++F
Sbjct: 94 EFSLFPNHPKWTSKVVTYRIMSYTSD-----LPRITVNQLVAKAFKIWSEAIPLTFKRLR 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF HGD PFDG LAH+F+P G H D E W G
Sbjct: 149 -WGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGGDAHFDEDERWTDGIG---- 203
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+ V+ VA HE+GH LGL+HS AVMYPT D K L+ DDI G+Q LYG
Sbjct: 204 -IGVNFLYVATHELGHSLGLSHSSDPNAVMYPTYSKEDSKNFKLSQDDINGIQLLYG 259
>gi|296196996|ref|XP_002746081.1| PREDICTED: interstitial collagenase isoform 1 [Callithrix jacchus]
Length = 471
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F +
Sbjct: 102 FVLTEGNPRWEK---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVPK 156
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 157 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDEMWTNNFRE---- 211
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+M+P+ V LA DDI G+QA+YG + N
Sbjct: 212 --YNLYRVAAHELGHSLGLSHSTDIGALMFPSYT-FSGDVQLAQDDINGIQAIYGRSQN 267
>gi|334330398|ref|XP_001366571.2| PREDICTED: matrilysin-like [Monodelphis domestica]
Length = 208
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 15/178 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+++ L+P P+W +V +++ + L + + ++A KW+ V ++F +
Sbjct: 40 QNFQLYPFTPKWPSNVVTYRIVSYTSD-----LPRYKVDQLVEQALGKWSEVSALTFKKV 94
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEK 166
D ADIRIGF G HGD PFDG G+LAH+F P G H D E W S+
Sbjct: 95 LIGD-ADIRIGFARGAHGDFYPFDGPGGILAHAFEPGIGIGGDAHFDNDEQW-----SDG 148
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S + V+ A HE+GH LGL HS AVMYPT + ++L+ DDI+G+QALYG
Sbjct: 149 SQLGVNFLFAATHELGHSLGLGHSSDPNAVMYPTYDASNSGDINLSEDDIKGIQALYG 206
>gi|449480074|ref|XP_002193372.2| PREDICTED: matrix metalloproteinase-28-like [Taeniopygia guttata]
Length = 480
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 8/149 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +YL +++ + AF W++V + F E ADIR+ F++GDH DG FDG
Sbjct: 102 NWPSYLPQHEVRLAVRAAFQLWSNVSSLRFGEARGGP-ADIRLTFFHGDHNDGLSNAFDG 160
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D+AE W++ G + +L V HE+GH LGL HSPVK
Sbjct: 161 PGGALAHAFFPRRGEAHFDSAERWSLHSGKGR-----NLFIVVAHEVGHTLGLQHSPVKS 215
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P K K L+ DDI +Q LYG
Sbjct: 216 ALMSPYYKKLSKDFVLSWDDILAIQNLYG 244
>gi|426370262|ref|XP_004052087.1| PREDICTED: macrophage metalloelastase [Gorilla gorilla gorilla]
Length = 470
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 24/196 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 104 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 157
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 211
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS------- 224
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 212 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRL 271
Query: 225 -NPNFTIGSLVESDIS 239
NPN + +L + ++S
Sbjct: 272 PNPNNSEPALCDPNLS 287
>gi|157830597|pdb|1CGE|A Chain A, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
Collagenase Complexed To Itself
Length = 168
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYD 113
L G PRW + L Y EN L D+ ++AF W++V P++F + +
Sbjct: 1 LTEGNPRWEQ---THLRYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQ 55
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVA 170
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 56 -ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------RE 108
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 109 YNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQN 164
>gi|449664773|ref|XP_004205997.1| PREDICTED: matrix metalloproteinase-24-like [Hydra magnipapillata]
Length = 271
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 103/192 (53%), Gaps = 21/192 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
+ + R +K L G T+ L++A +N + + TD++ + +R+F KWA+V
Sbjct: 89 SNSNRKRKRKYLLQG----TKWFKQNLTWAVENDNN-DGISRTDVRNIMRRSFEKWAAVT 143
Query: 103 PVSFIETDDY--DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-----SGKFHLDAA 155
+ FIE + + ADIR+ F HGD FDG G LAH+F P +G H D
Sbjct: 144 NLKFIELEKRPVNSADIRVSFEIKKHGDPYAFDGEGGTLAHAFYPLENTGLAGDCHFDDD 203
Query: 156 ETWAVDF---GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLA 211
E + + GS+KS L VAVHE+GH +GL HS V+ A+MYP + + DL
Sbjct: 204 EVFTIAANPSGSQKS-----LLWVAVHELGHSIGLEHSDVRGAIMYPWYTGFKGQDFDLT 258
Query: 212 LDDIQGVQALYG 223
DDI G+Q+LYG
Sbjct: 259 FDDISGIQSLYG 270
>gi|73988268|ref|XP_852601.1| PREDICTED: matrix metalloproteinase-26 [Canis lupus familiaris]
Length = 285
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 22/176 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG W +H TL+Y +INY ++ + +K + + A S W++V P+ F +
Sbjct: 93 FPGSSMWDKH---TLTY-----RIINYPRDINPSTVKNIMQNAVSIWSNVTPLIFQQVKS 144
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
D ADI+I F++ HGD PFDG GVL H+F P S G H D E W+ +
Sbjct: 145 QD-ADIKISFWDLAHGDCWPFDGPGGVLGHAFLPNSRAPGVIHFDRGEHWSTSY------ 197
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA+HE+GH LGL HS ++MYP RD + L DDI+ +Q LYG
Sbjct: 198 RGFNLFLVAIHELGHSLGLLHSKSLNSIMYPRYVNRDPRTFHLDGDDIKRIQQLYG 253
>gi|410909648|ref|XP_003968302.1| PREDICTED: collagenase 3-like [Takifugu rubripes]
gi|386799509|gb|AFJ38185.1| matrix metalloproteinase [Takifugu rubripes]
Length = 459
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP K +W T F + L +D+ ++A + WA+V P++F +
Sbjct: 92 EYTHFPRKLKWN-----TNKLTFRILDYTPDLQKSDVDKAVRKALNLWAAVTPLTFKKLH 146
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI I F +G+HGD PFDG +LAH++ P G H D E W K
Sbjct: 147 T-GTADIMISFGSGEHGDYNPFDGPNSLLAHAYPPGQGIGGDVHFDEDENWT------KD 199
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
A +L VA HE+GH LG+ HS A+MYPT R + L++DD++G+Q LYG NPN
Sbjct: 200 STAYNLFIVAAHELGHALGMGHSTDAGALMYPTYSYRTGFL-LSVDDVKGIQELYGPNPN 258
Query: 228 FT 229
T
Sbjct: 259 PT 260
>gi|114640081|ref|XP_508721.2| PREDICTED: matrilysin isoform 2 [Pan troglodytes]
Length = 267
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPHSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 R-GTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|402895056|ref|XP_003910651.1| PREDICTED: interstitial collagenase-like isoform 1 [Papio anubis]
Length = 469
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L + ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 208 REYNLYRVAAHELGHSLGLAHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGGSQN 265
>gi|332208020|ref|XP_003253093.1| PREDICTED: matrilysin [Nomascus leucogenys]
Length = 270
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP +P+WT V +++++ L + + +A + W IP+ F
Sbjct: 97 EYSLFPNRPKWTSKVVTYRIVSYTRD-----LPSITVDRLVSKALNMWGKEIPLHFRRVV 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
ADI IGF G HGD PFDG +LAH+F+P + G H D E W ++ +
Sbjct: 152 R-GTADIMIGFARGAHGDSYPFDGPGNILAHAFAPGTGLGGDAHFDEDERW-----TDGN 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 206 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQHFKLSQDDIKGIQKLYGKRS 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|449484253|ref|XP_002198044.2| PREDICTED: interstitial collagenase [Taeniopygia guttata]
Length = 400
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 93/181 (51%), Gaps = 22/181 (12%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ Y PG P+W R+ L+Y ++NY + D+ +RA S W++V P++F
Sbjct: 32 EQYAFTPGNPKWKRN---NLTY-----RILNYTPKMRRADVDEAVRRALSVWSNVTPLTF 83
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFG 163
+ + + ADI I F DH D PFDG G LAH+F P G H+D E W
Sbjct: 84 QKVEG-EIADIMISFAYRDHRDNSPFDGPNGQLAHAFQPGEGLGGDVHMDEEEAWT---- 138
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
K +L V HE+GH LGL+HS A+MYPT D + L DDI G+QA+Y
Sbjct: 139 --KDGRGYNLFIVLAHELGHSLGLSHSNDPGALMYPTYSYTDPSEFRLPQDDIDGIQAIY 196
Query: 223 G 223
G
Sbjct: 197 G 197
>gi|4835862|gb|AAD30274.1| MMP-1 protein [Bos taurus]
Length = 174
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 92/181 (50%), Gaps = 16/181 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PGK W L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 4 FVLTPGKSCWEN---TNLTYRI--ENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE 58
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P + G H D E W +F
Sbjct: 59 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQD---- 113
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
+L VA HE GH LGL HS A+MYP+ V L+ DDI G+QA+YG + N
Sbjct: 114 --YNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLSQDDIDGIQAIYGPSQNP 170
Query: 229 T 229
T
Sbjct: 171 T 171
>gi|402895058|ref|XP_003910652.1| PREDICTED: interstitial collagenase-like isoform 2 [Papio anubis]
Length = 403
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L + ++AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 142 REYNLYRVAAHELGHSLGLAHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGGSQN 199
>gi|148230386|ref|NP_001088423.1| matrix metalloproteinase-18 precursor [Xenopus laevis]
gi|125858527|gb|AAI29520.1| Mmp18 protein [Xenopus laevis]
Length = 467
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N L D++ +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 120 NFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAGDHKDNSPFDGSG 178
Query: 137 GVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
G+LAH+F P + G H D ETW K+ +L VA HE GH LGL+HS +
Sbjct: 179 GILAHAFQPGNGIGGDAHFDEDETWT------KTSEIYNLFLVAAHEFGHSLGLSHSTDQ 232
Query: 194 EAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYPT D K L DDI +Q LYG SNP G S N+ +
Sbjct: 233 GALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSRCDPNVVFN 287
>gi|410971829|ref|XP_003992365.1| PREDICTED: interstitial collagenase-like [Felis catus]
Length = 471
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
YVL G PRW H +T + EN L ++ ++AF W+ V P++F + +
Sbjct: 102 YVLTEGNPRW-EHTDLT----YRIENYTPDLPRAEVDRAIEKAFQLWSDVSPLTFTKVSE 156
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI + F GDH D PFDG G LAH+F P G H D E W DF
Sbjct: 157 GQ-ADIMLSFVWGDHYDNSPFDGPGGNLAHAFQPGPNLGGDVHFDEDERWTNDFRD---- 211
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG + N
Sbjct: 212 --FNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-YSGDVQLSQDDIDGIQAIYGPSQN 267
>gi|54261660|gb|AAH84654.1| Mmp18 protein [Xenopus laevis]
Length = 466
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N L D++ +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 119 NFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAGDHKDNSPFDGSG 177
Query: 137 GVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
G+LAH+F P + G H D ETW K+ +L VA HE GH LGL+HS +
Sbjct: 178 GILAHAFQPGNGIGGDAHFDEDETWT------KTSEIYNLFLVAAHEFGHSLGLSHSTDQ 231
Query: 194 EAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYPT D K L DDI +Q LYG SNP G S N+ +
Sbjct: 232 GALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSRCDPNVVFN 286
>gi|301773296|ref|XP_002922061.1| PREDICTED: stromelysin-1-like [Ailuropoda melanoleuca]
Length = 476
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 23/182 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG PRW + L+Y ++NY L + + ++A S W V P++F
Sbjct: 98 DFTTFPGMPRWRK---THLTY-----RIMNYMLDLPRDAVDSAIEKALSLWEEVTPLTFS 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGS 164
+ DD + ADI+I F DHGD PFDG VLAH++ P G + H D E W D
Sbjct: 150 KADDGE-ADIKILFAVRDHGDFNPFDGPGKVLAHAYPPGPGIYGDAHFDDDEPWTRDTS- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYP R ++ L+ DD+ G+Q+LY
Sbjct: 208 -----GTNLFLVAAHELGHSLGLFHSADPRALMYPVYNARTDLARLRLSQDDVAGIQSLY 262
Query: 223 GS 224
GS
Sbjct: 263 GS 264
>gi|296216051|ref|XP_002754398.1| PREDICTED: macrophage metalloelastase [Callithrix jacchus]
Length = 469
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W +H +S +N ++ D+ V ++AF W+ V P+ F +T+ AD
Sbjct: 105 GRPVWKKHY-----ITYSIQNYTPDMNRKDVDYVIQKAFQVWSHVTPLKFSKTNA-GVAD 158
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I + F +G HGD FDG GV+AH+F P G H D E W ++ +L
Sbjct: 159 IVMFFASGAHGDYNAFDGRGGVIAHAFGPGYGIGGDTHFDEDEFWTIN------SKGTNL 212
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VAVHEIGH LGL HS A+M+PT K D L+ DDI+G+Q+LYG
Sbjct: 213 FLVAVHEIGHALGLDHSSDPNAIMFPTYKYVDVSTFRLSADDIRGIQSLYG 263
>gi|281183314|ref|NP_001162305.1| matrix metalloproteinase-26 precursor [Papio anubis]
gi|160904139|gb|ABX52125.1| matrix metallopeptidase 26 (predicted) [Papio anubis]
Length = 261
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P + + + PG+ +W ++ TL+Y +INY H + +K A S
Sbjct: 78 HQPRCGVPDESNTSISPGRCKWNKY---TLTY-----RIINYPHDMKPSTVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI+I F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNED-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D L+
Sbjct: 189 KNEHWST------SNTGYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPGTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>gi|355564892|gb|EHH21381.1| Matrix metalloproteinase-26 [Macaca mulatta]
Length = 261
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 22/175 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG+ +W ++ TL+Y +INY H + +K A S W++V P+ F + +
Sbjct: 94 PGRCKWNKY---TLTY-----RIINYPHDMKPSTVKDSIYNAVSIWSNVTPLIFQQVQNE 145
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPV 169
D ADI+I F+ H DG PFDG G+L H+F P SG H D E W+ S
Sbjct: 146 D-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWST------SNT 198
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HEIGH LGL HS + ++MYPT D L+ DDIQ +Q LYG
Sbjct: 199 GYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPGTFQLSADDIQRIQHLYG 253
>gi|71051388|gb|AAH99337.1| Mmp18 protein [Xenopus laevis]
Length = 477
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N L D++ +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 130 NFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAGDHKDNSPFDGSG 188
Query: 137 GVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
G+LAH+F P + G H D ETW K+ +L VA HE GH LGL+HS +
Sbjct: 189 GILAHAFQPGNGIGGDAHFDEDETWT------KTSEIYNLFLVAAHEFGHSLGLSHSTDQ 242
Query: 194 EAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYPT D K L DDI +Q LYG SNP G S N+ +
Sbjct: 243 GALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSRCDPNVVFN 297
>gi|146271906|emb|CAL29437.2| interstitial collagenase [Galleria mellonella]
Length = 326
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L+ D+ +AFS W+ ++F + I + F G+HGDG+PFDG G LAH
Sbjct: 45 LNQADVDLELAKAFSVWSDYTDLTFTQKRSGQ-VHIEVRFETGEHGDGDPFDGPGGTLAH 103
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D AETW ++ S +L VA HE GH LGL+HS V+ A+M P
Sbjct: 104 AYFPVYGGDAHFDDAETWTIN-----SRRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPF 158
Query: 201 LKPRDKKVDLALDDIQGVQALYGSNPNFTIGS 232
+ D L DDIQG+QALYG IG+
Sbjct: 159 YRGYDPAFQLDQDDIQGIQALYGRKTQTDIGA 190
>gi|355747706|gb|EHH52203.1| Matrix metalloproteinase-26 [Macaca fascicularis]
Length = 261
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 22/175 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG+ +W ++ TL+Y +INY H + +K A S W++V P+ F + +
Sbjct: 94 PGRCKWNKY---TLTY-----RIINYPHDMKPSTVKDSIYNAVSIWSNVTPLIFQQVQNE 145
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPV 169
D ADI+I F+ H DG PFDG G+L H+F P SG H D E W+ S
Sbjct: 146 D-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWST------SNT 198
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HEIGH LGL HS + ++MYPT D L+ DDIQ +Q LYG
Sbjct: 199 GYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPGTFQLSADDIQRIQHLYG 253
>gi|326931304|ref|XP_003211772.1| PREDICTED: matrix metalloproteinase-28-like [Meleagris gallopavo]
Length = 443
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N YL +++ + AF W++V + F E D ADIR+ F++GDH DG FDG
Sbjct: 65 NWPPYLPQHEVRLAVRAAFELWSNVSSLVFWEARDGP-ADIRLTFFHGDHNDGLNNAFDG 123
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D+AE W++ G + +L V HE+GH LGL HSP K
Sbjct: 124 PGGALAHAFFPRRGEAHFDSAERWSLHSGKGR-----NLFVVVAHEVGHTLGLEHSPTKS 178
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P K K L DDI +Q LYG
Sbjct: 179 ALMSPYYKKLGKDFVLNWDDILAIQNLYG 207
>gi|327269197|ref|XP_003219381.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
Length = 461
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 96/179 (53%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G+P+W + L+Y ++NY + I D+ +RAF W+ V P++F
Sbjct: 95 FAFFSGQPKWGKK---DLTY-----RILNYTPDMEIQDVDKDIERAFKVWSRVSPLTFTR 146
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
D ADI I F + DHGD PFDG G +AH+++P S G H D E W+ G E
Sbjct: 147 VLQGD-ADILISFGSRDHGDFNPFDGPGGTVAHAYAPSSGIGGDAHFDEDENWS--HGLE 203
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS AVM+P + P + LA DDIQG+Q LYG
Sbjct: 204 GS----NLFFVAAHEFGHSLGLYHSNDPNAVMFPVYRQPELGQQILAQDDIQGIQHLYG 258
>gi|12585266|sp|O13065.1|MMP18_XENLA RecName: Full=Matrix metalloproteinase-18; Short=MMP-18; AltName:
Full=Collagenase-4; Short=xCol4; Flags: Precursor
gi|2055321|gb|AAB53148.1| collagenase 4 precursor [Xenopus laevis]
Length = 467
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N L D++ +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 120 NFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAGDHKDNSPFDGSG 178
Query: 137 GVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
G+LAH+F P + G H D ETW K+ +L VA HE GH LGL+HS +
Sbjct: 179 GILAHAFQPGNGIGGDAHFDEDETWT------KTSEIYNLFLVAAHEFGHSLGLSHSTDQ 232
Query: 194 EAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYPT D K L DDI +Q LYG SNP G S N+ +
Sbjct: 233 GALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSRCDPNVVFN 287
>gi|355752580|gb|EHH56700.1| hypothetical protein EGM_06163 [Macaca fascicularis]
Length = 469
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L + ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE GH LGL HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 208 REYNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGGSQN 265
>gi|355566053|gb|EHH22482.1| hypothetical protein EGK_05760 [Macaca mulatta]
Length = 469
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L + ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE GH LGL HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 208 REYNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGGSQN 265
>gi|392311625|pdb|3TT4|A Chain A, Human Mmp8 In Complex With L-Glutamate Motif Inhibitor
Length = 159
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G P+W R L+Y N L +++ K AF W+ P+ F + AD
Sbjct: 1 GNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGE-AD 54
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I FY DHGD PFDG G+LAH+F P G H DA ETW + +L
Sbjct: 55 INIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTSANYNL 108
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 109 FLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG 159
>gi|33324363|gb|AAQ07962.1| matrix metalloproteinase 13 [Danio rerio]
Length = 475
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 32 FKLKQSDKYD---------PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
FKLK S K D P K Y F G +W +H L+Y N +
Sbjct: 74 FKLKVSGKLDQETLEVMKKPRCGVPDIKAYSTFAGDYKWKKH---QLTYRIG--NYTPDM 128
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
+ ++ +A WA V P+ F ADI I F GDH DG PFDG G LAH+
Sbjct: 129 SVAEVDDSISKALKVWADVTPLRFTRIYS-GTADIMISFATGDHRDGYPFDGPNGFLAHA 187
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D ET+ S +SP +L VA HE GH LGL HS A+MYP
Sbjct: 188 FPPFEGIGGDAHFDDDETF-----SYRSPQYYNLFLVAAHEFGHSLGLEHSQDPGALMYP 242
Query: 200 TLKPRD-KKVDLALDDIQGVQALYGSN 225
T RD + L DD+ G+Q+LYG N
Sbjct: 243 TYVYRDVDRFVLPRDDVNGIQSLYGPN 269
>gi|363741276|ref|XP_415771.3| PREDICTED: matrix metalloproteinase-28 [Gallus gallus]
Length = 472
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N YL +++ + AF W++V + F E D ADIR+ F++GDH DG FDG
Sbjct: 94 NWPPYLPQHEVRLAVRAAFELWSNVSSLVFWEARDGP-ADIRLTFFHGDHNDGLNNAFDG 152
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D+AE W++ G + +L V HE+GH LGL HSP K
Sbjct: 153 PGGALAHAFFPRRGEAHFDSAERWSLHSGKGR-----NLFVVVAHEVGHTLGLEHSPTKS 207
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P K K L DDI +Q LYG
Sbjct: 208 ALMSPYYKKLGKDFVLNWDDILAIQNLYG 236
>gi|109108464|ref|XP_001098302.1| PREDICTED: interstitial collagenase isoform 2 [Macaca mulatta]
Length = 469
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L + ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE GH LGL HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 208 REYNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGGSQN 265
>gi|259490994|gb|ACW82491.1| karilysin protease [Tannerella forsythia]
Length = 472
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 22/198 (11%)
Query: 32 FKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVF 91
FK+ YD T +YVL K W + TL Y N ++L T+ +
Sbjct: 16 FKVYSQRLYDNGPLTG-DNNYVLQGSK--WNK---TTLKYYI--YNSSSHLTTTERENAI 67
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE----- 146
+ AF+ W+ +SFI+ + + ADI+I + G+HGDG PFDG G+LAH+F P
Sbjct: 68 RSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNTGILAHAFYPPPAGGN 127
Query: 147 -SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
+G H D E W+++ GS +DL +VA HEIGHLLG+ HS V A+MYP
Sbjct: 128 YAGHLHFDDDENWSIN-GS-----GIDLITVAAHEIGHLLGIEHSNVSSALMYPYYTGIK 181
Query: 206 KKVDLALDDIQGVQALYG 223
+++D DD V LYG
Sbjct: 182 RQLD--NDDCLAVWDLYG 197
>gi|449665060|ref|XP_002164594.2| PREDICTED: hatching enzyme-like [Hydra magnipapillata]
Length = 361
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG 127
TL+Y F EN L +K ++AF+ W+SV P++F E + I IGFY+G HG
Sbjct: 105 TLTYKF--ENTGADLPAKTVKDTVRKAFNMWSSVTPLTFTEVTERR-GHINIGFYSGTHG 161
Query: 128 DGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
DG F G G LAH+F P++G H D E W V+ DL +AVHEIGH +G+
Sbjct: 162 DGGDFFGPGGTLAHAFYPQNGNLHFDENENWVVN------QRGTDLLEIAVHEIGHAIGI 215
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
HS ++ +M+PT + L DDI+ VQALYG
Sbjct: 216 QHSSIRGTIMFPTYFGYRSNLQLHDDDIKAVQALYG 251
>gi|281341734|gb|EFB17318.1| hypothetical protein PANDA_011006 [Ailuropoda melanoleuca]
Length = 442
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 23/182 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG PRW + L+Y ++NY L + + ++A S W V P++F
Sbjct: 64 DFTTFPGMPRWRK---THLTY-----RIMNYMLDLPRDAVDSAIEKALSLWEEVTPLTFS 115
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGS 164
+ DD + ADI+I F DHGD PFDG VLAH++ P G + H D E W D
Sbjct: 116 KADDGE-ADIKILFAVRDHGDFNPFDGPGKVLAHAYPPGPGIYGDAHFDDDEPWTRDTS- 173
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYP R ++ L+ DD+ G+Q+LY
Sbjct: 174 -----GTNLFLVAAHELGHSLGLFHSADPRALMYPVYNARTDLARLRLSQDDVAGIQSLY 228
Query: 223 GS 224
GS
Sbjct: 229 GS 230
>gi|390362519|ref|XP_003730177.1| PREDICTED: uncharacterized protein LOC580694 [Strongylocentrotus
purpuratus]
Length = 2248
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 67 MTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDH 126
+ ++Y F +N L I+ RAF WA V ++F ET D ADI I F G H
Sbjct: 1763 VNITYHF--KNFSPDLTEAQIRDAVSRAFQLWADVTTLTFRETSDPKAADIVIRFATGVH 1820
Query: 127 GDGE--PFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHL 184
GDG FDG G LAH+F PE+G H D ET++V GSE+ DL VA HEIGH
Sbjct: 1821 GDGAFAAFDGPGGTLAHAFFPENGDLHFDDDETFSV--GSEQD---TDLFIVAAHEIGHS 1875
Query: 185 LGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
LGL HS A+MYP L+ DDI G+Q +YG
Sbjct: 1876 LGLEHSSDMGALMYPWYLGYQHDYALSQDDIDGIQQIYG 1914
>gi|449449429|ref|XP_004142467.1| PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus]
Length = 303
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFH 151
+RAF W SF + ADI + F G+HGD EPFDG G+LAHS G+ H
Sbjct: 176 RRAFQTWEDNTKFSFFLSPRVQTADILVSFERGEHGDHEPFDGEGGILAHSLGAVDGRVH 235
Query: 152 LDAAETWAVDFGSEKSPVA-VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDL 210
DA + W E P+ DLE++A+HEIGH LGL HS A+M+ + K L
Sbjct: 236 FDADDRW------EGDPMERYDLETLALHEIGHALGLGHSSSSLAIMWAYMYKGFPKTRL 289
Query: 211 ALDDIQGVQALYGS 224
+DDI+G++ALYGS
Sbjct: 290 TIDDIEGIRALYGS 303
>gi|356501973|ref|XP_003519797.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 248
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 92/154 (59%), Gaps = 12/154 (7%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
LSYA +N ++ +K +F+ AF +W+ V V+F ET ++ +D+RI F D G
Sbjct: 104 LSYAVHPQNNVS----DSVKVLFREAFDRWSKVTLVNFTETASFNESDVRITFLELD-GK 158
Query: 129 GEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLT 188
G G +G ++S G +LD+ E W V +E+ V DLESV +H IGHLLGL
Sbjct: 159 G----GTVGGADRNYSLGVGSVYLDSEEEWVVRGENEEGDV--DLESVVMHMIGHLLGLG 212
Query: 189 HSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
HS V+EAVMYP + P +KK +L+ DD+Q + +Y
Sbjct: 213 HSSVEEAVMYPIVLP-EKKTELSYDDLQRIHQIY 245
>gi|297269067|ref|XP_002799829.1| PREDICTED: interstitial collagenase [Macaca mulatta]
Length = 403
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L + ++AF W++V P++F + +
Sbjct: 34 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSE 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 141
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE GH LGL HS A+MYP+ V LA DDI G+QA+YG + N
Sbjct: 142 REYNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGGSQN 199
>gi|297269060|ref|XP_001097508.2| PREDICTED: matrilysin [Macaca mulatta]
gi|402895046|ref|XP_003910646.1| PREDICTED: LOW QUALITY PROTEIN: matrilysin [Papio anubis]
gi|355566059|gb|EHH22488.1| hypothetical protein EGK_05766 [Macaca mulatta]
gi|355752574|gb|EHH56694.1| hypothetical protein EGM_06157 [Macaca fascicularis]
Length = 270
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ H T + + +A + W IP+ F +
Sbjct: 97 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHFT-VDRLVSKALNMWGKEIPLHFRKVV 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 152 -WGTADIMIGFARGAHGDPYPFDGPGNTLAHAFAPGPGLGGDAHFDEDERW-----TDGS 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 206 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|156384222|ref|XP_001633230.1| predicted protein [Nematostella vectensis]
gi|156220297|gb|EDO41167.1| predicted protein [Nematostella vectensis]
Length = 515
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 14/182 (7%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
+E R K+ Y L RW + ++Y F+ N L T ++ +F RA W+ +
Sbjct: 90 SENARRKRRYAL--QGSRWEKS---EITYRFASYG--NDLSRTAVRRIFARAAKLWSDKM 142
Query: 103 PVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVD 161
++ ET D AD + F + DHGDG+PFDG G LAH+F P+ G H D +ET+
Sbjct: 143 QLNIKETSDAK-ADFTVSFNSYDHGDGDPFDGPGGTLAHAFFPQYGGDLHFDDSETY--- 198
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
+E V+L VA HE+GH LGL+HS V ++VM P ++L DD++G++ L
Sbjct: 199 --TEGKDAGVNLLFVAAHELGHTLGLSHSDVWQSVMAPYYPGYKANLELHEDDVKGIRHL 256
Query: 222 YG 223
YG
Sbjct: 257 YG 258
>gi|395814634|ref|XP_003780850.1| PREDICTED: interstitial collagenase-like [Otolemur garnettii]
Length = 403
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++ P++F +
Sbjct: 34 FVLTQGNPRWEQ---THLTYRI--ENYTPDLPKADVDDAIEKAFQLWSNASPLTFTKVFQ 88
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W + +
Sbjct: 89 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDEKWTNNLRN---- 143
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYPT +V+LA DDI G+QA+YG + N
Sbjct: 144 --YNLYRVAAHELGHSLGLSHSTDIGALMYPTYA-FSGEVELAQDDIDGIQAIYGPSQN 199
>gi|348508354|ref|XP_003441719.1| PREDICTED: matrix metalloproteinase-20-like [Oreochromis niloticus]
Length = 416
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ +P +P+W H+ +T + A +M D++ + A W+ P+ FI+ +
Sbjct: 103 NFGFYPNRPKWKNHI-ITYTIARYTPDMKK----EDVEKSVRSALKMWSDATPLKFIKIN 157
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI F HGD PFDG GVLAH+F P G H D ETW G++
Sbjct: 158 -HRKADIVFSFSRRTHGDFFPFDGPGGVLAHAFMPGMGMGGDVHFDEDETWTA--GTQ-- 212
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR-DKKVDLALDDIQGVQALYG 223
+L SVA HE+GH LGLTHS A+MYP + + + K L+ DD+ G+QALYG
Sbjct: 213 --GYNLLSVAAHELGHSLGLTHSRDPSAIMYPNYRHQSNAKYSLSNDDVMGIQALYG 267
>gi|146271904|emb|CAL29436.2| interstitial collagenase [Galleria mellonella]
Length = 333
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L+ D+ +AFS W+ ++F + I + F G+HGDG+PFDG G LAH
Sbjct: 45 LNQADVDLELAKAFSVWSDYTDLTFTQKRSGQ-VHIEVRFETGEHGDGDPFDGPGGTLAH 103
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D AETW ++ S +L VA HE GH LGL+HS V+ A+M P
Sbjct: 104 AYFPVYGGDAHFDDAETWTIN-----SRRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPF 158
Query: 201 LKPRDKKVDLALDDIQGVQALYGSNPNFTIGS 232
+ D L DDIQG+QALYG IG+
Sbjct: 159 YRGYDPAFQLDQDDIQGIQALYGRKTQTDIGA 190
>gi|410909622|ref|XP_003968289.1| PREDICTED: matrix metalloproteinase-28-like [Takifugu rubripes]
Length = 497
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 12/169 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ ++ V AF W++V + F E + ADIR+ FY GDH DG FDG
Sbjct: 120 NWPRHLPLSSVRLVVHAAFQLWSNVSNLVFREASEGP-ADIRLAFYEGDHNDGTGNAFDG 178
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D AE W ++ +L VA HEIGH LGL HSPV+
Sbjct: 179 PGGTLAHAFLPRRGEAHFDRAERWTLN-----GYKGHNLFMVAAHEIGHTLGLEHSPVRH 233
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG----SNPNFTIGSLVESDIS 239
A+M P + + + + DDI VQ LYG S+P +G ++ + +
Sbjct: 234 ALMSPYYRKLGRSLVPSWDDIVAVQQLYGKPSSSHPVRLLGQVLHATLQ 282
>gi|41350992|gb|AAH65591.1| Mmp13 protein [Danio rerio]
Length = 386
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y F G +W +H L+Y EN + + ++ +A WA V P+ F
Sbjct: 12 KAYSTFAGDYKWKKH---QLTYRI--ENYTPDMSVAEVDDSISKALKVWADVTPLRFTRI 66
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEK 166
ADI I F GDH DG PFDG G LAH+F P G H D ET+ S +
Sbjct: 67 YS-GTADIMISFATGDHRDGYPFDGPNGFLAHAFPPFEGIGGDAHFDDDETF-----SYR 120
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
SP +L VA HE GH LGL HS A+MYPT RD + L DD+ G+Q+LYG N
Sbjct: 121 SPQYYNLFLVAAHEFGHSLGLEHSQDPGALMYPTYVYRDVDRFVLPRDDVNGIQSLYGPN 180
>gi|403262085|ref|XP_003923427.1| PREDICTED: matrix metalloproteinase-26 [Saimiri boliviensis
boliviensis]
Length = 258
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 94/177 (53%), Gaps = 22/177 (12%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFSKWASVIPVSFIETD 110
+ PG+ +W ++ TL+Y +INY H + +K A S W+SV P+ F +
Sbjct: 89 ILPGRSKWDKY---TLTY-----RIINYPHEMKPSTVKDSIYNAVSIWSSVTPLVFQQVQ 140
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKS 167
+ + ADI+I F+ DH D PFDG G L H+F P SG H D E W+ S
Sbjct: 141 NEE-ADIKISFWQWDHEDCWPFDGPGGFLGHAFLPNSGNPGVVHFDKDEHWSA------S 193
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HEIGH LGL HS + ++MYPT D + L+ DDIQ +Q LYG
Sbjct: 194 NTGFNLFLVATHEIGHSLGLKHSGNRNSIMYPTYWYHDPRTFHLSADDIQRIQDLYG 250
>gi|321465332|gb|EFX76334.1| hypothetical protein DAPPUDRAFT_226103 [Daphnia pulex]
Length = 637
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 28 STPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDI 87
S P+ +L+ + + TR+K+ V RW L+++ K + I
Sbjct: 141 SEPRHRLR----HQASRTTRNKRYTVQ---GQRWHY---TNLTWSLRKGAKSRDMDSGQI 190
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES 147
+ RA + W ++F E + D ADIR+ F++G H DG PFDG +LAH+F P +
Sbjct: 191 RYQVHRALNLWQEASRLTFTEVNHED-ADIRVSFHSGFHNDGYPFDGKGTLLAHAFFPGT 249
Query: 148 G---KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
G H D E W D ++ S ++ +VA HE GH LGL+HS V+ A+M+P +
Sbjct: 250 GIGGDAHFDDEEPWVADEATQNSELS--FFAVAAHEFGHSLGLSHSSVQGAIMFPYYQSV 307
Query: 205 DKKVDLALDDIQGVQALYGS 224
D L DDI G+QA+YGS
Sbjct: 308 DGSFSLHSDDITGIQAIYGS 327
>gi|52346000|ref|NP_001005043.1| matrix metallopeptidase 7 (matrilysin, uterine) precursor [Xenopus
(Silurana) tropicalis]
gi|50369210|gb|AAH76908.1| MGC89057 protein [Xenopus (Silurana) tropicalis]
gi|224472824|gb|ACN49121.1| matrix metallopeptidase 7 [Xenopus (Silurana) tropicalis]
Length = 259
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG P+WT+ L+Y+ ++NY L + +RAF W++V P+ F
Sbjct: 92 EFRQFPGNPKWTK---TRLTYS-----IVNYTPDLSRQVVDTAIQRAFGVWSNVTPLQFT 143
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ D ADI I F HGD PFDG GVLAH++ P G H D E W
Sbjct: 144 KVSSGD-ADILIRFGARTHGDSSPFDGPSGVLAHAYGPGRGIGGDAHFDEDERWT----- 197
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+PT D + L+ DDI G+Q++YG
Sbjct: 198 -SSRTGFNLFLVAAHEFGHSLGLDHSTDPRALMFPTYHYVDTQAFRLSQDDINGIQSIYG 256
>gi|260819836|ref|XP_002605242.1| hypothetical protein BRAFLDRAFT_92284 [Branchiostoma floridae]
gi|229290573|gb|EEN61252.1| hypothetical protein BRAFLDRAFT_92284 [Branchiostoma floridae]
Length = 499
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ RA W+ P++F E D AD + F GDH DG PFDG G+ AH+F P+
Sbjct: 133 VQNTVARAIKLWSDASPLTFYEAKDRQKADFVVKFIKGDHNDGYPFDGEGGIYAHAFFPQ 192
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK 206
G H D E WA+ E SP DL +A HE+GH LGL HS V AVM P + K
Sbjct: 193 DGDVHFDNDEIWALK--QENSP-KKDLFIIAAHELGHSLGLGHSKVDGAVMRPKYRDIMK 249
Query: 207 KVD---LALDDIQGVQALYGSNP 226
D L+ DD +QA+YG P
Sbjct: 250 HKDIEKLSSDDTAAIQAVYGPCP 272
>gi|296217250|ref|XP_002754912.1| PREDICTED: matrix metalloproteinase-26 [Callithrix jacchus]
Length = 258
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 96/191 (50%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
Y P + + PG+ +W ++ TL+Y +INY H + +K A S
Sbjct: 75 YQPRCGVPDGSNTSILPGRCKWDKY---TLTY-----RIINYPHDMKPSTVKDSIYNAVS 126
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLD 153
W+SV + F + + D ADI+I F+ DH D PFDG G L H+F P S G H D
Sbjct: 127 IWSSVTSLIFQQVQNED-ADIKISFWQWDHDDCWPFDGPGGFLGHAFLPNSENPGVVHFD 185
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 186 KDEHWSA------SNTGFNLFLVATHEIGHSLGLKHSGNRNSIMYPTYWYHDPRTFHLSA 239
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 240 DDIQRIQGLYG 250
>gi|332019904|gb|EGI60365.1| Matrix metalloproteinase-14 [Acromyrmex echinatior]
Length = 513
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + +TP+ +K DK PA R K+ Y L + +R L+Y SK
Sbjct: 90 ETAKLMATPRCGVK--DKVGPAADGRSKR-YAL-----QGSRWRTKNLTYKISK--YPTG 139
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L+ +++ AFS W ++F ++ I I F G+HGDG+PFDG G LAH
Sbjct: 140 LNKQEVEKEIANAFSVWTGETDLTFTRKTGHENVHIEIRFEVGEHGDGDPFDGPGGTLAH 199
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D +E W + +S +L VA HE GH LGL+HS VK A+M P
Sbjct: 200 AYFPVYGGDAHFDDSERWTI-----RSYRGTNLFQVAAHEFGHSLGLSHSDVKSALMAPF 254
Query: 201 LKPRDKKVDLALDDIQGVQALYGS 224
+ D L DD+ +QALYG+
Sbjct: 255 YRGYDPHFTLDQDDVSAIQALYGT 278
>gi|410919419|ref|XP_003973182.1| PREDICTED: matrix metalloproteinase-19-like [Takifugu rubripes]
Length = 470
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
K Y+ + RW + +L+Y + NY + TD+ A + AF W+ V ++F
Sbjct: 94 KKYLKYRVMGRWRKK---SLTY-----RIYNYTPDMKKTDVSAAVRAAFRYWSDVADLTF 145
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEK 166
E Y ADIR+ F+ D EPFDG+ +LAH+ SPESG H D E W +E
Sbjct: 146 REIH-YGRADIRLAFHKRDGFCSEPFDGLGRILAHAESPESGVVHFDDDEFW-----TEG 199
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
S +L VA HEIGH LGL HS + A+M P L DDI+G+QALYG
Sbjct: 200 SYYGSNLRIVAAHEIGHALGLGHSQFRSALMAPVYTGYQVNFKLHSDDIKGIQALYGKRA 259
Query: 227 NFTIGSLVESDI 238
++ S + +
Sbjct: 260 TSSLDSATPAGV 271
>gi|291222679|ref|XP_002731343.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 437
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHIT------DIKAVFKRAFSKWASVIPVSFIETD 110
G R RH S ++ YL T D + RAF +W+ V P++F E
Sbjct: 56 GVGRQRRHTQFGDSKWDKRDLTYEYLSYTNDVSKDDQRNAISRAFKRWSDVTPLTFTEVT 115
Query: 111 DYDFADIRIGFYNGDHGDGEP--FDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
D ADI + F GDHGDG+ F+ V+AH++ P +G H + E +AVD G+
Sbjct: 116 D-GGADISLDFVVGDHGDGDANAFNRKGEVMAHAYPPGNGDIHFNDLENFAVDSGTAD-- 172
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
+DLE VA HEIGH LGL HS ++VM+ + L DD+ G+QA+YG N
Sbjct: 173 -GIDLEWVATHEIGHSLGLGHSEYHKSVMHSKYPGYISNLQLTRDDVNGIQAIYGKN 228
>gi|348540816|ref|XP_003457883.1| PREDICTED: matrix metalloproteinase-23-like [Oreochromis niloticus]
Length = 354
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 44 EATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
A R K+ Y + P +WT H ++Y + N L++ D + AF+KW+ V P
Sbjct: 30 RAARSKR-YAINPLGHKWTHH---NVTYRIIQ--FPNTLNVEDTRKAIGIAFTKWSDVSP 83
Query: 104 VSFIE-TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAE 156
++F E TD ADI IGFY +H D FDG+ G LAH+F P G+ H D E
Sbjct: 84 LTFTEVTDGNATADITIGFYTFNHTDCWWSPLHPCFDGLNGELAHAFLPPRGEIHFDNHE 143
Query: 157 TWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALD 213
W + F ++ DL VA HEIGH LGL HS +A+M+P ++ ++A D
Sbjct: 144 FWILGKSRFSWKQGVWLNDLVQVAAHEIGHALGLWHSRDPQALMHPNATYTGQR-NIAQD 202
Query: 214 DIQGVQALYGS 224
D+ G+Q LYG
Sbjct: 203 DVWGIQRLYGC 213
>gi|1000001|pdb|1CGF|A Chain A, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
Collagenase Complexed To Itself
gi|1000002|pdb|1CGF|B Chain B, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
Collagenase Complexed To Itself
Length = 162
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 88/173 (50%), Gaps = 16/173 (9%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYD 113
L G PRW + L Y EN L D+ ++AF W++V P++F + +
Sbjct: 1 LTEGNPRWEQ---THLRYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQ 55
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVA 170
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 56 -ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------RE 108
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG
Sbjct: 109 YNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYG 160
>gi|148225975|ref|NP_001079862.1| matrix metalloproteinase 13 precursor [Xenopus laevis]
gi|33585953|gb|AAH56040.1| MGC68994 protein [Xenopus laevis]
Length = 259
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ F G PRW+ T +S N L + KRAF W++V P+ F
Sbjct: 91 FTQFSGNPRWS-----TTQLTYSIVNYTPDLPRQLVDEAIKRAFGVWSNVTPLQFTAISS 145
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
D ADI I F HGD PFDG GVLAH+++P G H D E+W S
Sbjct: 146 GD-ADIFIRFGARAHGDSLPFDGPSGVLAHAYAPGRGIGGDAHFDEDESWT------SSR 198
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HE GH LGL HS V +A+M+P + D L+ DDI G+Q++YG
Sbjct: 199 AGFNLFLVAAHEFGHSLGLDHSTVPQALMFPNYRYEDTATFSLSQDDINGIQSIYG 254
>gi|449520886|ref|XP_004167463.1| PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]
Length = 194
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFH 151
+RAF W SF + ADI + F G+HGD EPFDG G+LAHS G+ H
Sbjct: 67 RRAFQTWEDNTKFSFFLSPRVQTADILVSFERGEHGDHEPFDGEGGILAHSLGAVDGRVH 126
Query: 152 LDAAETWAVDFGSEKSPVA-VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDL 210
DA + W E P+ DLE++A+HEIGH LGL HS A+M+ + K L
Sbjct: 127 FDADDRW------EGDPMERYDLETLALHEIGHALGLGHSSSSLAIMWAYMYKGFPKTRL 180
Query: 211 ALDDIQGVQALYGS 224
+DDI+G++ALYGS
Sbjct: 181 TIDDIEGIRALYGS 194
>gi|219518916|gb|AAI43774.1| Matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
Length = 470
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 24/196 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 104 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 157
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 211
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS------- 224
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 212 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRL 271
Query: 225 -NPNFTIGSLVESDIS 239
NP+ + +L + ++S
Sbjct: 272 PNPDNSEPALCDPNLS 287
>gi|410899050|ref|XP_003963010.1| PREDICTED: matrix metalloproteinase-23-like [Takifugu rubripes]
Length = 385
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 14/190 (7%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y L PGK +W + +T N+IN +D + +AF W+ V P SF E
Sbjct: 72 KRYTLTPGKLKWDK-FKLTYKLLSFPTNLIN---ASDTRRGIAKAFGLWSDVSPFSFREV 127
Query: 110 DDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD-- 161
+ ADI+IGFY +H D FDG+ G LAH+F P++G+ H D +E W +
Sbjct: 128 PADEEADIKIGFYPINHTDCLQSYLHHCFDGITGELAHAFFPQTGEIHFDDSEYWILGNM 187
Query: 162 -FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
F +K DL VA HEIGH LGL HS +A+M+ +K+ + D++ G+
Sbjct: 188 RFSWKKGVWLTDLVHVATHEIGHALGLMHSMDPKAIMHLNATLTGRKL-ITQDEVWGLHR 246
Query: 221 LYGSNPNFTI 230
LYG F I
Sbjct: 247 LYGCLDRFFI 256
>gi|344239428|gb|EGV95531.1| Stromelysin-2 [Cricetulus griseus]
Length = 966
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W L+Y ++NY L + + ++A W V P++F
Sbjct: 435 FTTFPGSPKWRE---TNLTY-----RIVNYTPDLPKESVDSAIEKALKVWEEVTPLTFSR 486
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG LAH++ P G + H D E W +
Sbjct: 487 RSEGE-ADIMISFAAGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDDEKWTL----- 540
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT--LKPRDKKVDLALDDIQGVQALYG 223
P +L VA HE+GH LGL HS KEA+MYP L + L+ DDI G+Q+LYG
Sbjct: 541 -GPSGTNLFLVAAHELGHSLGLFHSDKKEALMYPVYRLSTSPAQFQLSQDDIDGIQSLYG 599
Query: 224 SNPN 227
+P+
Sbjct: 600 PHPS 603
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 125 DHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEI 181
+HGD PFDG G+LAH+F P G H D+ ETW D + +L VA HE
Sbjct: 754 EHGDNSPFDGPNGILAHAFQPGQGIGGDTHFDSEETWTQDSRN------YNLFLVAAHEF 807
Query: 182 GHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
GH LGL+HS A+MYP + L DDI G+Q LYG
Sbjct: 808 GHSLGLSHSSDPGALMYPNYAYSEPSTYSLPQDDINGIQTLYG 850
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 59/181 (32%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG P+W R +T ++NY L + + ++A W V P++F
Sbjct: 102 DFSTFPGSPKW-RETHLTY-------RIVNYTPDLPKESVDSAIEKALKVWEEVTPLTFS 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKS 167
+ + + ADI I F G
Sbjct: 154 KRSEGE-ADIMISFAAG------------------------------------------- 169
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSN 225
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 170 --GTNLFLVAAHELGHSLGLFHSAKPEALMYPVYKSSGDLARFRLSQDDVDGIQSLYGPP 227
Query: 226 P 226
P
Sbjct: 228 P 228
>gi|354467447|ref|XP_003496181.1| PREDICTED: stromelysin-2 [Cricetulus griseus]
Length = 476
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FTTFPGSPKWRE---TNLTY-----RIVNYTPDLPKESVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG LAH++ P G + H D E W +
Sbjct: 152 RSEGE-ADIMISFAAGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDDEKWTL----- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT--LKPRDKKVDLALDDIQGVQALYG 223
P +L VA HE+GH LGL HS KEA+MYP L + L+ DDI G+Q+LYG
Sbjct: 206 -GPSGTNLFLVAAHELGHSLGLFHSDKKEALMYPVYRLSTSPAQFQLSQDDIDGIQSLYG 264
Query: 224 SNPN 227
+P+
Sbjct: 265 PHPS 268
>gi|73858572|ref|NP_002417.2| macrophage metalloelastase preproprotein [Homo sapiens]
gi|729179|sp|P39900.1|MMP12_HUMAN RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Macrophage elastase; Short=ME; Short=hME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|56788330|gb|AAW29944.1| matrix metalloproteinase 12 (macrophage elastase) [Homo sapiens]
gi|85567332|gb|AAI12302.1| Matrix metalloproteinase 12, preproprotein [Homo sapiens]
gi|119587437|gb|EAW67033.1| matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
gi|189054155|dbj|BAG36675.1| unnamed protein product [Homo sapiens]
gi|307685507|dbj|BAJ20684.1| matrix metallopeptidase 12 [synthetic construct]
gi|313883062|gb|ADR83017.1| matrix metallopeptidase 12 (macrophage elastase) [synthetic
construct]
Length = 470
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 24/196 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 104 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 157
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 211
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS------- 224
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 212 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRL 271
Query: 225 -NPNFTIGSLVESDIS 239
NP+ + +L + ++S
Sbjct: 272 PNPDNSEPALCDPNLS 287
>gi|260820864|ref|XP_002605754.1| hypothetical protein BRAFLDRAFT_121872 [Branchiostoma floridae]
gi|229291089|gb|EEN61764.1| hypothetical protein BRAFLDRAFT_121872 [Branchiostoma floridae]
Length = 798
Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats.
Identities = 63/169 (37%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
RW +H + N L D++ K+A W+ P+ F +DI I
Sbjct: 393 RWRKH-----DITYRILNHTPDLPRADVERELKKALDTWSEYTPLRFRRLTGSTRSDIEI 447
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F HGDG FDG G LAH++ P + G H D +ETW ++ GS + P +DL V
Sbjct: 448 SFAAFGHGDGNSFDGAGGTLAHAYGPGNGIGGDSHFDESETWTINRGSSR-PRGIDLHQV 506
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
A HE GH LGL HS V A+M P + + D L DDI+G+Q LYG
Sbjct: 507 AAHEFGHALGLGHSQVNTALMAPFYR---YQADFRLHGDDIRGIQRLYG 552
>gi|435970|gb|AAA58658.1| metalloproteinase [Homo sapiens]
Length = 470
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 24/196 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 104 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 157
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 211
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS------- 224
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 212 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRL 271
Query: 225 -NPNFTIGSLVESDIS 239
NP+ + +L + ++S
Sbjct: 272 PNPDNSEPALCDPNLS 287
>gi|395536045|ref|XP_003770031.1| PREDICTED: matrix metalloproteinase-28 [Sarcophilus harrisii]
Length = 725
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 46 TRHKKDYVLFPGKPRW-TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
TR KK +V GK W RH LSY N YL ++ + AF W++V +
Sbjct: 322 TRLKKRFVQQRGK--WYKRH----LSYRLV--NWPEYLPEPAVRQAVRAAFQVWSNVSSL 373
Query: 105 SFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDF 162
F E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W+
Sbjct: 374 EFWEAPASGPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFFPRRGEAHFDRDERWSF-- 431
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
KS +L V HEIGH LGL HSP A+M P K + L DD+ +Q LY
Sbjct: 432 ---KSRRGRNLFVVLAHEIGHTLGLGHSPAPRALMAPYYKRLGRDSVLNWDDVLAIQNLY 488
Query: 223 GSNPNFTIGSLVESDISTNL 242
G ++ + + TN
Sbjct: 489 GQPLGGSVAEQLPGKLFTNF 508
>gi|301773292|ref|XP_002922059.1| PREDICTED: stromelysin-1-like [Ailuropoda melanoleuca]
gi|281341732|gb|EFB17316.1| hypothetical protein PANDA_011004 [Ailuropoda melanoleuca]
Length = 477
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 23/182 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG PRW + L+Y ++NY L + + ++A S W V P++F
Sbjct: 99 DFTTFPGMPRWRK---THLTY-----RIMNYMLDLPRDAVDSAIEKALSLWEEVTPLTFS 150
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGS 164
+ DD + ADI+I F DHGD PFDG VLAH++ P G + H D E W D
Sbjct: 151 KADDGE-ADIKILFAVRDHGDFIPFDGPGKVLAHAYPPGPGIYGDAHFDDDEPWTRDTS- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYP R ++ L+ DD+ G+Q+LY
Sbjct: 209 -----GTNLFLVAAHELGHSLGLFHSADPRALMYPVYNARTDLARLRLSQDDVAGIQSLY 263
Query: 223 GS 224
GS
Sbjct: 264 GS 265
>gi|410971831|ref|XP_003992366.1| PREDICTED: macrophage metalloelastase [Felis catus]
Length = 470
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 16/172 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W + L+Y + + + D+ ++AF W+ V P+ F + + AD
Sbjct: 106 GRPVWKKRF---LTYRIN--SYTPDMKPADVDYAIQKAFQVWSDVTPLKFRKIHSGE-AD 159
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I IGF +G HGD PFDG G++AH+F P G H D AETW ++ +L
Sbjct: 160 IMIGFASGAHGDFNPFDGRGGIIAHAFGPGPGIGGDTHFDEAETWTANY------RGTNL 213
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
VAVHE+GH LGL HS +A+M+PT D L+ DD++G+Q+LYG
Sbjct: 214 FLVAVHELGHSLGLGHSSDPKAIMFPTYHYVDPNTFRLSSDDVRGIQSLYGG 265
>gi|114640115|ref|XP_508724.2| PREDICTED: macrophage metalloelastase [Pan troglodytes]
gi|397516408|ref|XP_003828422.1| PREDICTED: macrophage metalloelastase [Pan paniscus]
Length = 470
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 104 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 157
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 211
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 212 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 263
>gi|403262941|ref|XP_003923823.1| PREDICTED: matrilysin [Saimiri boliviensis boliviensis]
Length = 270
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP +WT V +++++ L T ++ + +A + W IP+ F
Sbjct: 97 EYSLFPDNSKWTTKVVTYRIVSYTRD-----LPHTTVERLVSKALNMWGKEIPLRFRRLL 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 152 -WGTADIMIGFARGAHGDPYPFDGPGNTLAHAFAPGPGLGGDAHFDEDERW-----TDGS 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG+
Sbjct: 206 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGTRR 265
Query: 227 N 227
N
Sbjct: 266 N 266
>gi|355702809|gb|AES02055.1| matrix metallopeptidase 7 [Mustela putorius furo]
Length = 238
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 91/182 (50%), Gaps = 15/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
DY LFP + +W V +++++ L + + +A + W+ IP+SF
Sbjct: 67 DYSLFPAQLKWNSRVVTYRVISYTRD-----LPRVTVNQLVSKALALWSREIPLSFRRVL 121
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI IGF G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 122 A-GTADIMIGFARGAHGDYYPFDGPGNTLAHAFAPGPGLGGDAHFDEDERW-----TDGS 175
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYGSNP 226
+ V+ A HE+GH LGL HS AVMYPT + K L+ DDI+G+Q LYG
Sbjct: 176 RLGVNFLVTATHELGHSLGLGHSSDPNAVMYPTYRVGESKNFRLSPDDIKGIQKLYGEKS 235
Query: 227 NF 228
N
Sbjct: 236 NL 237
>gi|354467445|ref|XP_003496180.1| PREDICTED: interstitial collagenase A [Cricetulus griseus]
Length = 464
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADI 117
PRWT+ +S N YL ++ F++AF W+SV P++F D D DI
Sbjct: 103 NPRWTK-----TDLTYSILNYTPYLSRAVVEESFEKAFQVWSSVTPLTFTRVYDED-GDI 156
Query: 118 RIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLE 174
+ FY GDH D PFDG LAH+F P G H D E W + +L
Sbjct: 157 VLAFYRGDHDDNNPFDGPNYGLAHAFQPGPGIGGDVHFDLDERWT------DTSENFNLF 210
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
VA HE+GH LGLTHS A+M+P+ L +DI +QALYG +PN
Sbjct: 211 YVATHELGHSLGLTHSSDIGALMFPSYTWYTDDFVLNQEDINRIQALYGHSPN 263
>gi|360042941|emb|CCD78351.1| matrix metallopeptidase-7 (M10 family) [Schistosoma mansoni]
Length = 454
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
Query: 89 AVFKRAFSKWASVIPVSFIETDDY-DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE- 146
AVF+ F+ W+ V+ + F+E DY ADI I F G HGD PFDG GVLAH++ P
Sbjct: 200 AVFQHTFNLWSRVVNLDFMEEKDYYKPADIVIQFGAGKHGDSIPFDGAGGVLAHAYYPTP 259
Query: 147 ------SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
SG H D E W + G K+ +L SVA HE+GH LGL HS V A+MYP
Sbjct: 260 DNVYSFSGDAHFDDDEIW--NDGPHKT--HRNLISVAAHELGHSLGLGHSSVPTAIMYPY 315
Query: 201 LKPRDKKVDLALDDIQGVQALYGS 224
+KV L DDI G+Q +YG+
Sbjct: 316 YTRTWEKVKLDPDDIAGIQQIYGA 339
>gi|256078917|ref|XP_002575739.1| matrix metallopeptidase-7 (M10 family) [Schistosoma mansoni]
Length = 454
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
Query: 89 AVFKRAFSKWASVIPVSFIETDDY-DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE- 146
AVF+ F+ W+ V+ + F+E DY ADI I F G HGD PFDG GVLAH++ P
Sbjct: 200 AVFQHTFNLWSRVVNLDFMEEKDYYKPADIVIQFGAGKHGDSIPFDGAGGVLAHAYYPTP 259
Query: 147 ------SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
SG H D E W + G K+ +L SVA HE+GH LGL HS V A+MYP
Sbjct: 260 DNVYSFSGDAHFDDDEIW--NDGPHKT--HRNLISVAAHELGHSLGLGHSSVPTAIMYPY 315
Query: 201 LKPRDKKVDLALDDIQGVQALYGS 224
+KV L DDI G+Q +YG+
Sbjct: 316 YTRTWEKVKLDPDDIAGIQQIYGA 339
>gi|432952309|ref|XP_004085051.1| PREDICTED: matrix metalloproteinase-23-like [Oryzias latipes]
Length = 323
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE- 108
K Y + P +WT H L+Y K N L++ D + AF+KW+ V P++F E
Sbjct: 4 KRYAINPLGYKWTHH---NLTYRIIK--FPNTLNMEDTRKAIGIAFTKWSDVSPLTFTEL 58
Query: 109 TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
TD ADI +GF+ +H D FDG+ G LAH+F P G+ H D E W +
Sbjct: 59 TDGNTTADITLGFFTFNHTDCWWSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWILGK 118
Query: 162 --FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
F ++ DL VA HEIGH LGL HS +A+M+P ++ ++A DD+ G+Q
Sbjct: 119 SRFSWKQGVWLNDLVQVAAHEIGHALGLWHSRDPQALMHPNATYTGQR-NIARDDVWGIQ 177
Query: 220 ALYGS 224
LYG
Sbjct: 178 RLYGC 182
>gi|431916543|gb|ELK16521.1| Macrophage metalloelastase [Pteropus alecto]
Length = 460
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 24/195 (12%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W +H+ ++Y + N + D+ ++AF W+ V P+ F + + + AD
Sbjct: 96 GRPVWKKHL---ITYRIN--NYTPDMKRVDVDYAIQKAFQVWSDVTPLKFKKINTGE-AD 149
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F GDHGD PF+ G+LAH+F P S G H + A+ W +F +L
Sbjct: 150 IMIRFALGDHGDFYPFNDKDGILAHAFGPGSGIGGDTHFNEAKMWTANFK------GFNL 203
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--------S 224
VAVHE GH LGL HS +++M+PT + + + L+ DD +G+Q+LYG S
Sbjct: 204 FLVAVHEFGHSLGLQHSNDPKSIMFPTYRYVNPNIFHLSADDKRGIQSLYGGPEKHQPSS 263
Query: 225 NPNFTIGSLVESDIS 239
NPN T + E ++S
Sbjct: 264 NPNSTESAACEPNMS 278
>gi|449686980|ref|XP_004211314.1| PREDICTED: matrix metalloproteinase-24-like [Hydra magnipapillata]
Length = 484
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINY---------LHITDIKAVFKRAFSKWASVIPVSF-- 106
KP +R+ TL K+N + + L +I+ +AFS W +V + F
Sbjct: 94 KPNESRNRRYTLQGTTWKKNELTWKLLNNNNDGLTRGEIETTLHKAFSMWEAVTNLKFRQ 153
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-----SGKFHLDAAETWAVD 161
++ ++ ADI I F G H D FDG G LAH+F P SG H D AE + ++
Sbjct: 154 LQINENKKADIEIKFAQGYHDDPYSFDGFGGTLAHAFYPHTNEGLSGDVHFDDAEKFTIE 213
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQA 220
SP L VAVHEIGH +GL HS VKEA+M+P + +D + + L+ DD+ G+Q+
Sbjct: 214 -----SPEGRSLLWVAVHEIGHSIGLEHSNVKEALMFPWYRVQDVRNIQLSDDDVLGIQS 268
Query: 221 LYGSNPNFTIGSLV 234
+YGS + + S V
Sbjct: 269 IYGSKKSIMLPSTV 282
>gi|326671416|ref|XP_683002.5| PREDICTED: matrix metalloproteinase-18-like [Danio rerio]
Length = 770
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 32 FKLKQSDKYDPA--EATRHKK----DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHIT 85
F L++S + DP A R + D F RWT TL+Y SK + + +
Sbjct: 325 FGLEESGEVDPQTIRAMRRARCGLSDVERFGKTMRWTNK---TLTYKISKFS--SKMSSA 379
Query: 86 DIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
+K F++A+ WA P+ F D ADI I F N DH DG PFDG G+LAH+FSP
Sbjct: 380 RVKTAFRQAWQLWAQAAPLKFRRKRRSD-ADIVISFNNKDHNDGSPFDGEGGILAHAFSP 438
Query: 146 E---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
G H D ETW + GS +L VAVHE GH LGL+HS A+M+P
Sbjct: 439 GPGIGGDVHFDDEETWTTN-GS-----GYNLLPVAVHEFGHALGLSHSSDPGAIMFPAYN 492
Query: 203 PRDKKV-DLALDDIQGVQALYG 223
V L+ D++ ++ +YG
Sbjct: 493 FGLHSVLQLSYQDVKDIKEMYG 514
>gi|408833328|gb|AFU93060.1| matrix metalloproteinase 7, partial [Marmota monax]
Length = 264
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP + +WT + +++ + L + + +A S W+ IP+ F
Sbjct: 92 EYSLFPKRQKWTSRIVTYRILSYTSD-----LKPAVVDQIVAKALSMWSRHIPLRFKRVR 146
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI IGF G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 147 -MGTADIMIGFARGAHGDFLPFDGPGNTLAHAFAPGPGLGGDAHFDEDELW-----TDGS 200
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
+ ++ A HE+GH LGL HS AVMYPT + D + LA DDI+G+Q LYG +
Sbjct: 201 GLGINFLYAATHELGHSLGLGHSSDPRAVMYPTYRTEDSQSFRLAQDDIEGIQKLYGRS 259
>gi|431916541|gb|ELK16519.1| Interstitial collagenase [Pteropus alecto]
Length = 470
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW R L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 101 FVLTEGNPRWER---THLTYRI--ENYTPDLPRADVNYAIEKAFQLWSNVSPLTFTQVFE 155
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F +
Sbjct: 156 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDVHFDEDEWWTNNFRN---- 210
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+ +YG NP
Sbjct: 211 --YNLYRVAAHELGHSLGLSHSADIGALMYPNYI-FTGDVQLSQDDIDGIHTIYGPSKNP 267
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 268 IQPIGPKTPQVCDSKLTFD 286
>gi|301773298|ref|XP_002922071.1| PREDICTED: macrophage metalloelastase-like [Ailuropoda melanoleuca]
Length = 493
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W + ++Y + N + D+ ++AF W+ V P+ F + + + AD
Sbjct: 129 GRPVWKKRF---ITYRIN--NYTPDMRPADVDYAIQKAFQVWSDVTPLKFRKINSGE-AD 182
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F +G HGD PFDG GV+AH+F P G H D AE W ++ +L
Sbjct: 183 IMIRFASGAHGDFTPFDGRGGVIAHAFGPGPGIGGDTHFDEAEIWTKNYK------GTNL 236
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS----NPNF 228
VAVHE+GH LGL+HS +A+M+PT D L+ DD++G+Q+LYG P+
Sbjct: 237 FLVAVHELGHSLGLSHSSDPKAIMFPTYSYVDPNTFRLSADDVRGIQSLYGRPERHQPSS 296
Query: 229 TIGSLVESDISTNLAVD 245
S + NL+ D
Sbjct: 297 NPDSRESATCDPNLSFD 313
>gi|357619633|gb|EHJ72124.1| matrix metalloproteinase 1 isoform 1 [Danaus plexippus]
Length = 485
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
Query: 62 TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGF 121
+R L+Y SK + L+ ++ +AFS W+ ++F + I I F
Sbjct: 59 SRWRVKNLTYKISK--YPSRLNRDEVDTELAKAFSVWSDYTDLTFTQKRSGQ-VHIEIRF 115
Query: 122 YNGDHGDGEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
G+HGDG+PFDG G LAH++ P G H D AE W+++ S +L VA HE
Sbjct: 116 EKGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDAEMWSIN-----SLRGTNLFQVAAHE 170
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVES 236
GH LGL+HS V+ A+M P + +K L DDIQG+QALYG +G S
Sbjct: 171 FGHSLGLSHSDVRTALMAPFYRGYNKAFQLDQDDIQGIQALYGHKTQLDVGGSFPS 226
>gi|198420757|ref|XP_002125302.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 533
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L + ++ + AF W + F + ADI I F G HGDG+PFDG LAH
Sbjct: 124 LPASQVETEIRAAFQWWEDNSSLRFSKVAKSQRADIEILFSAGAHGDGDPFDGPGQTLAH 183
Query: 142 SFSPES-GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P S G H D AE W++ GS K V+L VA HE GH LGL+HS V EA+M P
Sbjct: 184 AYFPGSGGNAHFDEAERWSISSGSGK----VNLRIVAAHEFGHSLGLSHSDVSEALMAPF 239
Query: 201 LKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDI 238
PR L DDIQ +Q LYG S+V+ DI
Sbjct: 240 YNPRSS--GLHSDDIQAIQRLYGK-------SMVKPDI 268
>gi|62955747|ref|NP_001017890.1| matrix metalloproteinase-23 precursor [Danio rerio]
gi|62203239|gb|AAH92954.1| Matrix metallopeptidase 23a, like [Danio rerio]
gi|182890478|gb|AAI64476.1| Mmp23al protein [Danio rerio]
Length = 377
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 33 KLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFK 92
KL D A R K+ Y + P RW +SY +K N L+ D +
Sbjct: 41 KLSSVDSKTHGGAARSKR-YAINPLGYRWEH---FNVSYKITK--FPNTLNKDDTRKAIS 94
Query: 93 RAFSKWASVIPVSFIE-TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSP 145
AF+KW+ V P++F E T+ ADI IGFY +H D FDG+ G LAH+F P
Sbjct: 95 IAFTKWSDVSPLTFTEITNTSKSADITIGFYTYNHTDCWRSPLHPCFDGLNGELAHAFLP 154
Query: 146 ESGKFHLDAAETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
G+ H D E W + F ++ DL VA HEIGH LGL HS A+M+P
Sbjct: 155 PRGEIHFDNHEFWILGKSRFSWKQGVWLNDLVQVAAHEIGHALGLWHSQDPNALMHPNAT 214
Query: 203 PRDKKVDLALDDIQGVQALYGS 224
++ ++A DDI G+Q LYG
Sbjct: 215 YTGQR-NIAQDDIWGIQRLYGC 235
>gi|30348964|ref|NP_766385.1| matrix metalloproteinase-28 isoform 2 precursor [Mus musculus]
gi|26341830|dbj|BAC34577.1| unnamed protein product [Mus musculus]
gi|27461084|gb|AAL57762.1| matrix metalloproteinase-28 variant B precursor [Mus musculus]
gi|223459846|gb|AAI37922.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
Length = 496
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + + T+
Sbjct: 286 PLGRSVATQLPGKVFTDF 303
>gi|390343660|ref|XP_001179971.2| PREDICTED: macrophage metalloelastase-like [Strongylocentrotus
purpuratus]
Length = 485
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 109/250 (43%), Gaps = 38/250 (15%)
Query: 24 IAVRSTPKFKLKQSDKYDPAE------------ATRHKKDYVLFPGKPRWTRHVPMTLSY 71
+ + +TP+ L D +P + KK YVL RW + L++
Sbjct: 29 LGMMNTPRCGLPDVDPENPETDPDSDADSPEGLEVKRKKRYVL--ANSRWEK---TDLTW 83
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEP 131
L +K + K A W ++F E D ADI+I F G+HGD
Sbjct: 84 RIDGSRPTPDLEADHVKRIMKNALQFWDDASALTFREETGGD-ADIQISFAVGEHGDTYD 142
Query: 132 FDGVLGVLAHSFSPES------GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLL 185
FDG G LAH+F P S G H D +ET+ S+ S +L VA+HE GH L
Sbjct: 143 FDGPGGTLAHAFYPTSPPVSIAGDAHFDDSETF-----SDGSAAGTNLLQVAIHEFGHSL 197
Query: 186 GLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVD 245
GL HS V +A+MYP + + L DDI G+QALYG N + D VD
Sbjct: 198 GLQHSDVNDAIMYPYYRGYIPDITLDRDDIAGIQALYGENTD---------DPEQPSTVD 248
Query: 246 LRIKSSMWAT 255
+ WAT
Sbjct: 249 CSTVAITWAT 258
>gi|148683759|gb|EDL15706.1| matrix metallopeptidase 28 (epilysin), isoform CRA_c [Mus musculus]
Length = 529
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 151 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 203
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 204 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 263
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LYG
Sbjct: 264 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLYGK 318
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + + T+
Sbjct: 319 PLGRSVATQLPGKVFTDF 336
>gi|296216039|ref|XP_002754394.1| PREDICTED: matrilysin [Callithrix jacchus]
Length = 267
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP +WT V +++++ L ++ + +A + W IP+ F +
Sbjct: 94 EYSLFPDHAKWTSKVVTYRIMSYTRD-----LPRITVERLVSKALNMWGKEIPLRFRKLP 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDPYPFDGPGNTLAHAFAPGPGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG+
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGTRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>gi|301610873|ref|XP_002934969.1| PREDICTED: matrix metalloproteinase-18-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 459
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 96/181 (53%), Gaps = 26/181 (14%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYL-HIT--DIKAVFKRAFSKWASVIPVSFIE 108
+ FP P W + L+Y ++NY H+T ++ ++AF W+ V+P++F
Sbjct: 94 FSAFPRNPVWKKK---DLTY-----RILNYTSHMTRDEVDRAIEKAFKVWSDVVPLTFTR 145
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSE 165
D +DI + F +GDH D PFDG G+LAH+F+P G H DA ETW
Sbjct: 146 IYDR-VSDIEMSFASGDHKDAFPFDGPAGILAHTFAPGDNTGGDVHFDADETWT------ 198
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT---LKPRDKKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYPT + P + L+ DDI+G+ +LY
Sbjct: 199 SGSAGTNLFLVAAHELGHSLGLDHSNDPSALMYPTYHYINP--NTLQLSEDDIKGIHSLY 256
Query: 223 G 223
G
Sbjct: 257 G 257
>gi|5616492|gb|AAD45804.1|AF162688_1 matrix metalloproteinase [Hydra vulgaris]
Length = 484
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINY---------LHITDIKAVFKRAFSKWASVIPVSF-- 106
KP +R+ TL K+N + + L +I+ +AFS W +V + F
Sbjct: 94 KPNESRNRRYTLQGTTWKKNELTWKLLNNNNDGLTRGEIETTLHKAFSMWEAVTNLKFRQ 153
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-----SGKFHLDAAETWAVD 161
++ ++ ADI I F G H D FDG G LAH+F P SG H D AE + ++
Sbjct: 154 LQINENKKADIEIKFAQGYHDDPYSFDGFGGTLAHAFYPHTNEGLSGDVHFDDAEKFTIE 213
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQA 220
SP L VAVHEIGH +GL HS VKEA+M+P + +D + + L+ DD+ G+Q+
Sbjct: 214 -----SPEGRSLLWVAVHEIGHSIGLEHSNVKEALMFPWYRVQDVRDIQLSDDDVLGIQS 268
Query: 221 LYGSNPNFTIGSLV 234
+YGS + + S V
Sbjct: 269 IYGSKKSIMLPSTV 282
>gi|156405090|ref|XP_001640565.1| predicted protein [Nematostella vectensis]
gi|156227700|gb|EDO48502.1| predicted protein [Nematostella vectensis]
Length = 511
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 88/168 (52%), Gaps = 13/168 (7%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF-ADIRIGFYNGDH 126
TL Y EN L ++ + A + WA+V P++FIE D +IRI F GDH
Sbjct: 114 TLKYRI--ENYTPDLPREEVDNAIRNALAMWAAVTPLTFIEVYDPRIEVEIRIRFVTGDH 171
Query: 127 GDGEPFDGVLGVLAHSFSPE-----SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEI 181
GDG PFDG G LAH+F P SG H D E + + ++ +DL VAVHE
Sbjct: 172 GDGYPFDGPGGTLAHAFYPHDNTGLSGDAHFDDEEYFTL-----RTDHGIDLFWVAVHEF 226
Query: 182 GHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
GH LGL HS +A+MYP + L DD GVQA+YG+ + T
Sbjct: 227 GHSLGLDHSSNVDAIMYPFYRGYVPDFQLHYDDKAGVQAIYGTKTSIT 274
>gi|291405620|ref|XP_002719118.1| PREDICTED: matrix metalloproteinase 28 [Oryctolagus cuniculus]
Length = 521
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L + ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPESAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDRDERWSL----SRRRRGRNLFVVLAHEIGHTLGLTHSPAPR 256
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
A+M P K + L+ DD+ VQ LYG ++ + + + T+
Sbjct: 257 ALMAPYYKRLGRDALLSWDDVLAVQRLYGKPLGRSVATQLPGKVFTDF 304
>gi|27446748|gb|AAL47576.1| matrix metalloproteinase-28 precursor [Mus musculus]
gi|219520252|gb|AAI45049.1| Mmp28 protein [Mus musculus]
Length = 520
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + + T+
Sbjct: 286 PLGRSVATQLPGKVFTDF 303
>gi|281341735|gb|EFB17319.1| hypothetical protein PANDA_011007 [Ailuropoda melanoleuca]
Length = 407
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W + ++Y + N + D+ ++AF W+ V P+ F + + + AD
Sbjct: 74 GRPVWKKRF---ITYRIN--NYTPDMRPADVDYAIQKAFQVWSDVTPLKFRKINSGE-AD 127
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F +G HGD PFDG GV+AH+F P G H D AE W ++ +L
Sbjct: 128 IMIRFASGAHGDFTPFDGRGGVIAHAFGPGPGIGGDTHFDEAEIWTKNYK------GTNL 181
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS----NPNF 228
VAVHE+GH LGL+HS +A+M+PT D L+ DD++G+Q+LYG P+
Sbjct: 182 FLVAVHELGHSLGLSHSSDPKAIMFPTYSYVDPNTFRLSADDVRGIQSLYGRPERHQPSS 241
Query: 229 TIGSLVESDISTNLAVD 245
S + NL+ D
Sbjct: 242 NPDSRESATCDPNLSFD 258
>gi|148683760|gb|EDL15707.1| matrix metallopeptidase 28 (epilysin), isoform CRA_d [Mus musculus]
Length = 543
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 151 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 203
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 204 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 263
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LYG
Sbjct: 264 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLYGK 318
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + + T+
Sbjct: 319 PLGRSVATQLPGKVFTDF 336
>gi|444724329|gb|ELW64936.1| Macrophage metalloelastase [Tupaia chinensis]
Length = 381
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+ + FP +P W H S + N + D+ ++AF W++V P+ F +
Sbjct: 96 QQFSTFPRRPVWRTH-----SITYRINNYTPDMKQKDVDYAIQKAFQVWSNVTPLKFRKI 150
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEK 166
D + ADI I F G HGD FDG G++AH+F P S G H D AE W ++
Sbjct: 151 DAGE-ADIMILFAYGAHGDYSAFDGRGGIIAHAFGPGSGIQGDAHFDEAEMWTIN----- 204
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALY 222
+L VAVHE GH LGL HS +A+M+PT + D L+ DDI+G+Q+LY
Sbjct: 205 -SRGTNLFLVAVHEFGHSLGLGHSNDPKAIMFPTYRYIDPSTFRLSADDIRGIQSLY 260
>gi|4929859|pdb|1A86|A Chain A, Mmp8 With Malonic And Aspartic Acid Based Inhibitor
gi|18158815|pdb|1JH1|A Chain A, Crystal Structure Of Mmp-8 Complexed With A 6h-1,3,4-
Thiadiazine Derived Inhibitor
gi|134105470|pdb|2OY2|A Chain A, Human Mmp-8 In Complex With Peptide Iag
gi|134105472|pdb|2OY2|F Chain F, Human Mmp-8 In Complex With Peptide Iag
gi|134105474|pdb|2OY4|A Chain A, Uninhibited Human Mmp-8
gi|134105475|pdb|2OY4|F Chain F, Uninhibited Human Mmp-8
gi|440923787|pdb|1A85|A Chain A, Mmp8 With Malonic And Asparagine Based Inhibitor
Length = 158
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADI 117
P+W R L+Y N L +++ K AF W+ P+ F + ADI
Sbjct: 1 NPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGE-ADI 54
Query: 118 RIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLE 174
I FY DHGD PFDG G+LAH+F P G H DA ETW + +L
Sbjct: 55 NIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTSANYNLF 108
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG
Sbjct: 109 LVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYG 158
>gi|30348960|ref|NP_536701.1| matrix metalloproteinase-28 isoform 1 precursor [Mus musculus]
gi|27461082|gb|AAL57761.1| matrix metalloproteinase-28 variant A precursor [Mus musculus]
gi|219518500|gb|AAI45050.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
Length = 510
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + + T+
Sbjct: 286 PLGRSVATQLPGKVFTDF 303
>gi|332138103|pdb|2Y6C|A Chain A, The Discovery Of Mmp7 Inhibitors Exploiting A Novel
Selectivity Trigger
Length = 165
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 2 YSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV- 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 56 WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGSS 110
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LY
Sbjct: 111 LGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLY 165
>gi|338727317|ref|XP_001503575.3| PREDICTED: matrix metalloproteinase-26-like [Equus caballus]
Length = 261
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 22/177 (12%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETD 110
+FPG +W +H TL+Y +INY + +K + A S W++V + F E
Sbjct: 92 VFPGSSKWNKH---TLTY-----RIINYPREMKRDTVKDIILDALSIWSNVTSLIFQEAK 143
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
D ADI + F++ HGD PFDG G+L H+F P+S G H D E W+ +
Sbjct: 144 SQD-ADITLSFWDLAHGDDWPFDGPGGILGHAFLPDSDAPGVIHFDKGEHWSNSYK---- 198
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA+HE+GH LGL HS + ++MYP+ D + L +DDIQ +Q LYG
Sbjct: 199 --GFNLFLVAIHELGHSLGLRHSGSQNSIMYPSYVYHDPRTFHLGVDDIQRIQQLYG 253
>gi|148683761|gb|EDL15708.1| matrix metallopeptidase 28 (epilysin), isoform CRA_e [Mus musculus]
Length = 553
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 151 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 203
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 204 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 263
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LYG
Sbjct: 264 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLYGK 318
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + + T+
Sbjct: 319 PLGRSVATQLPGKVFTDF 336
>gi|354498488|ref|XP_003511347.1| PREDICTED: matrix metalloproteinase-28-like isoform 2 [Cricetulus
griseus]
Length = 499
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P R KK + PG + +H LSY N L ++ + AF W++V
Sbjct: 116 PGAKMRRKKRFAR-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNV 168
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWA 159
+ F E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W+
Sbjct: 169 SALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDRDERWS 228
Query: 160 VDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ + +L V HEIGH LGL HSP A+M P K + L+ DD+ VQ
Sbjct: 229 LSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPRALMAPYYKKLGRDALLSWDDVLAVQ 283
Query: 220 ALYGSNPNFTIGSLVESDISTNLAVDL 246
+LYG +G V + + L D
Sbjct: 284 SLYGK----PLGRSVATQLPGKLFTDF 306
>gi|260784980|ref|XP_002587541.1| hypothetical protein BRAFLDRAFT_230518 [Branchiostoma floridae]
gi|229272690|gb|EEN43552.1| hypothetical protein BRAFLDRAFT_230518 [Branchiostoma floridae]
Length = 442
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 44 EATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
E +R K Y L +WT+ L+Y N + L D+KA+ RA WA V P
Sbjct: 59 EDSRRTKRYTL--QGEKWTK---THLTYYIV--NNASSLPYEDVKAILNRAVQVWAEVSP 111
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
++F E D +AD+ I F G+H DG FDG G+L H+F P SG H D E W
Sbjct: 112 LTFEEKRD-GWADLYIYFARGEHTDGPENAFDGPGGILGHAFFPTSGHAHFDDEEKW--- 167
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
+ + +L VA HE GH LGL HS V+E++M P + + DD+ +Q L
Sbjct: 168 --TNEGKDGKNLFMVAAHEFGHTLGLAHSNVEESLMSPYYQDYKTDFKMPYDDVMAIQQL 225
Query: 222 YGSNPNF 228
YG+ P F
Sbjct: 226 YGNAPLF 232
>gi|354498486|ref|XP_003511346.1| PREDICTED: matrix metalloproteinase-28-like isoform 1 [Cricetulus
griseus]
Length = 513
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P R KK + PG + +H LSY N L ++ + AF W++V
Sbjct: 116 PGAKMRRKKRFAR-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNV 168
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWA 159
+ F E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W+
Sbjct: 169 SALEFWEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDRDERWS 228
Query: 160 VDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ + +L V HEIGH LGL HSP A+M P K + L+ DD+ VQ
Sbjct: 229 LSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPRALMAPYYKKLGRDALLSWDDVLAVQ 283
Query: 220 ALYGSNPNFTIGSLVESDISTNLAVDL 246
+LYG +G V + + L D
Sbjct: 284 SLYGK----PLGRSVATQLPGKLFTDF 306
>gi|348523698|ref|XP_003449360.1| PREDICTED: matrix metalloproteinase-28-like [Oreochromis niloticus]
Length = 522
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L + ++ + AF W++V + F E ADIR+ FY GDH DG FDG
Sbjct: 144 NWPQHLSLGSVRLAVRAAFQLWSNVSGLVFQEAPGGP-ADIRLAFYEGDHNDGASNAFDG 202
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D AE W ++ +L V HEIGH LGL HSPV+
Sbjct: 203 PGGTLAHAFLPRRGEAHFDMAERWTLN-----GHKGHNLFMVTAHEIGHTLGLEHSPVRH 257
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P + + + L+ DDI VQ LYG
Sbjct: 258 ALMSPYYRKLGRGLVLSWDDIIAVQQLYG 286
>gi|327269126|ref|XP_003219346.1| PREDICTED: matrilysin-like [Anolis carolinensis]
Length = 423
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y F G P+W ++ +L+Y N + L ++++ A W+ V P+ F +T
Sbjct: 98 EYTTFEGSPKWKKN---SLTYRII--NTTSDLPQDKVESILAEAIKVWSDVTPLKFTKTT 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
D ADI I F +HGD PFDGV G LAH+F+P +G H D E W D
Sbjct: 153 DT--ADIDIYFARDEHGDNYPFDGVGGTLAHAFAPGKGLAGDAHFDDDEYWTED------ 204
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALY 222
L VA HE GH LGL HS A+MYPT + K L DD++G+Q LY
Sbjct: 205 DEGTSLFIVAAHEFGHSLGLGHSKSHGALMYPTYSYKKQKNYKLPTDDVKGIQKLY 260
>gi|345799781|ref|XP_854594.2| PREDICTED: macrophage metalloelastase [Canis lupus familiaris]
Length = 470
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 111/235 (47%), Gaps = 17/235 (7%)
Query: 17 IHESPQCIAVRSTPKFKLKQSDK-YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSK 75
I E Q + ++ T K D + P + + G+P W +H+ ++Y +
Sbjct: 65 IQEMQQFLGLKVTGKLDASTLDMMHMPRCGLPDVQHFSTMQGRPVWKKHL---ITYRIN- 120
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
N + D+ +AF W++V P+ F + + + ADI I F + HGD PFDG
Sbjct: 121 -NYTPDMQPADVDYAIHKAFEVWSNVTPLKFRKVNSGE-ADIMILFASRAHGDFSPFDGR 178
Query: 136 LGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
GV+AH+F P G H D AE W K+ +L VAVHE+GH LGL HS
Sbjct: 179 GGVIAHAFGPGPQIGGDMHFDEAEIWT------KTYKGTNLFLVAVHELGHSLGLGHSSD 232
Query: 193 KEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
+A+M+PT + L+ DDI G+Q+LYG S + S N +L
Sbjct: 233 PKAIMFPTYSYVNPNTFHLSADDIHGIQSLYGGPEKHQFSSNTDGTESANCDSNL 287
>gi|441645194|ref|XP_003253514.2| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase [Nomascus
leucogenys]
Length = 434
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
N L D++ ++AF W+ P++F + ADI I F+ DHGD PFDG
Sbjct: 85 RNYTPQLSKADVERAIEKAFKVWSDASPLTFTRISQGE-ADINIAFFQRDHGDNSPFDGP 143
Query: 136 LGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
G+LAH+F G H DA ETW K+ +L VA HE GH LGL HS
Sbjct: 144 NGILAHAFRXGQGIGGDAHFDAEETWT------KTSTNYNLFLVAAHEFGHSLGLAHSSD 197
Query: 193 KEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYP R+ L DDI G+QA+YG SNP G +L D
Sbjct: 198 PGALMYPNYAFRETSTYSLPQDDIDGIQAIYGPSSNPIQPTGPSTPKPCDPSLTFD 253
>gi|440912887|gb|ELR62412.1| Stromelysin-1, partial [Bos grunniens mutus]
Length = 447
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 97/183 (53%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG+P+W + L+Y ++NY L + + ++A + W V P++F
Sbjct: 102 FSTFPGEPKWKK---THLTY-----RIVNYTKDLPRDAVDSAIEKALTVWEEVTPLTFSR 153
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P SG + H D E W D
Sbjct: 154 IYEGE-ADIMIIFAVREHGDFLPFDGPGKVLAHAYPPGSGFYGDAHFDDDEQWTKDTS-- 210
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
++L VA HE+GH LGL HS +EA+MYP PR + L+ DD+ G+Q LYG
Sbjct: 211 ----GINLFLVAAHELGHSLGLQHSTEREALMYPVYDPRTDLTRFRLSQDDVDGIQFLYG 266
Query: 224 SNP 226
S P
Sbjct: 267 SPP 269
>gi|297268618|ref|XP_001112141.2| PREDICTED: olfactory receptor 51L1 [Macaca mulatta]
Length = 504
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFSKWASVIPVSFIETDDY 112
PG+ +W ++ TL+Y +INY H + +K A S W++V P+ F + +
Sbjct: 24 PGRCKWNKY---TLTY-----RIINYPHDMKPSTVKDSIYNAVSIWSNVTPLIFQQVQNE 75
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPV 169
D ADI+I F+ H DG PFDG G+L H+F P SG H D E W+ S
Sbjct: 76 D-ADIKISFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFDKNEHWS------TSNT 128
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALY 222
+L VA HEIGH LGL HS + ++MYPT D L+ DDIQ +Q LY
Sbjct: 129 GYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPGTFQLSADDIQRIQHLY 182
>gi|22671537|gb|AAN04364.1|AF451898_69 matrix metalloproteinase [Heliothis zea virus 1]
Length = 792
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 93/175 (53%), Gaps = 15/175 (8%)
Query: 60 RWTRH----VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP-VSFIETDDYDF 114
R+T H P+T S + N+ N I I+ R +W P + F+E
Sbjct: 289 RYTLHDTWKNPITWSVLANSSNIEN---INVIRTDVDRMLKRWKREAPALEFVEVAPGSK 345
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSE--KSPV 169
+ I +GFY+GDHGDG FDG LAH+F P G+ H+DA E W +E K
Sbjct: 346 STITLGFYHGDHGDGTRFDGNGWFLAHAFYPGPGRGGQIHIDAEEPWVFSNNAEERKPEE 405
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ D +S+A+HE+GH LG+ HS V +AVMYP K +L DDI ++ALYG+
Sbjct: 406 SADFQSIALHELGHALGVGHSDVHDAVMYPYYG--GVKRELKEDDIAAIKALYGN 458
>gi|350284804|gb|AEQ27775.1| MMP variant 1 [Manduca sexta]
Length = 556
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 18/199 (9%)
Query: 26 VRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHIT 85
V S P+ +K + + A R Y L + +R L+Y SK + L+
Sbjct: 103 VMSLPRCGVKDKVGFGESRAKR----YAL-----QGSRWRVKNLTYKISK--YPSKLNHA 151
Query: 86 DIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
++ A +AFS W ++F + I I F G+HGDG+PFDG G LAH++ P
Sbjct: 152 EVDAELAKAFSVWTDYTDLTFTQKRSGQ-VHIEIRFEKGEHGDGDPFDGPGGTLAHAYFP 210
Query: 146 -ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
G H D AE W+++ S +L VA HE GH LGL+HS V+ A+M P +
Sbjct: 211 VYGGDAHFDDAEMWSIN-----SRRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPFYRGF 265
Query: 205 DKKVDLALDDIQGVQALYG 223
D L DDIQG+QALYG
Sbjct: 266 DPAFQLDQDDIQGIQALYG 284
>gi|172356221|ref|NP_001116500.1| matrix metalloproteinase 1 isoform 2 [Bombyx mori]
gi|169730454|gb|ACA64805.1| matrix metalloproteinase variant 2 [Bombyx mori]
Length = 538
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG 127
L+Y SK + L+ ++ A +AFS W+ ++F + I I F G+HG
Sbjct: 139 NLTYKISK--YPSRLNRAEVDAELAKAFSVWSDYTDLTFTQKRSGQ-VHIEIRFEKGEHG 195
Query: 128 DGEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLG 186
DG+PFDG G LAH++ P G H D AE W+++ S +L VA HE GH LG
Sbjct: 196 DGDPFDGPGGTLAHAYFPVYGGDAHFDDAEMWSIN-----SRRGTNLFQVAAHEFGHSLG 250
Query: 187 LTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
L+HS V+ A+M P + D L DD+QG+Q+LYG
Sbjct: 251 LSHSDVRSALMAPFYRGYDPAFQLDQDDVQGIQSLYG 287
>gi|167427311|gb|ABZ80287.1| olfactory receptor, family 51, subfamily L, member 1 (predicted)
[Callithrix jacchus]
Length = 504
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 95/190 (50%), Gaps = 22/190 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
Y P + + PG+ +W ++ TL+Y +INY H + +K A S
Sbjct: 8 YQPRCGVPDGSNTSILPGRCKWDKY---TLTY-----RIINYPHDMKPSTVKDSIYNAVS 59
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLD 153
W+SV + F + + D ADI+I F+ DH D PFDG G L H+F P S G H D
Sbjct: 60 IWSSVTSLIFQQVQNED-ADIKISFWQWDHDDCWPFDGPGGFLGHAFLPNSENPGVVHFD 118
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 119 KDEHWS------ASNTGFNLFLVATHEIGHSLGLKHSGNRNSIMYPTYWYHDPRTFHLSA 172
Query: 213 DDIQGVQALY 222
DDIQ +Q LY
Sbjct: 173 DDIQRIQGLY 182
>gi|370703014|ref|YP_004956816.1| orf68 gene product [Helicoverpa zea nudivirus 2]
gi|365199611|gb|AEW69617.1| matrix metalloprotease [Helicoverpa zea nudivirus 2]
Length = 789
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 93/175 (53%), Gaps = 15/175 (8%)
Query: 60 RWTRH----VPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP-VSFIETDDYDF 114
R+T H P+T S + N+ N I I+ R +W P + F+E
Sbjct: 286 RYTLHDTWKNPITWSVLANSSNIEN---INVIRTDVDRMLKRWKREAPALEFVEVAPGSN 342
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSE--KSPV 169
+ I +GFY+GDHGDG FDG LAH+F P G+ H+DA E W +E K
Sbjct: 343 STITLGFYHGDHGDGTRFDGNGWFLAHAFYPGPGRGGQIHIDAEEPWVFSNNAEERKPED 402
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ D +S+A+HE+GH LG+ HS V +AVMYP K +L DDI ++ALYG+
Sbjct: 403 SADFQSIALHELGHALGVGHSDVHDAVMYPYYG--GVKRELKEDDIAAIKALYGN 455
>gi|348508352|ref|XP_003441718.1| PREDICTED: collagenase 3-like [Oreochromis niloticus]
Length = 460
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP +W + + F N L D+ +RA + WA V P++F +
Sbjct: 93 EYNHFPRHLKWENN-----NVTFRIVNYTPDLKKADVDKAIRRALNVWADVTPLTFKKLY 147
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ + ADI I F + +HGD PFDG G+LAH++ P G H D E W K
Sbjct: 148 EGN-ADIMISFGSKEHGDYNPFDGPGGLLAHAYPPGQGIGGDTHFDEDEQWT------KD 200
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
A +L VA HE+GH LG++HS A+MYP + LA DDI+G+QALYG NPN
Sbjct: 201 SSAYNLFIVAAHELGHALGMSHSTDPGALMYP-IYTYTTGYPLAEDDIEGIQALYGPNPN 259
>gi|172356113|ref|NP_001116499.1| matrix metalloproteinase 1 isoform 1 [Bombyx mori]
gi|169730452|gb|ACA64804.1| matrix metalloproteinase variant 1 [Bombyx mori]
Length = 561
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG 127
L+Y SK + L+ ++ A +AFS W+ ++F + I I F G+HG
Sbjct: 139 NLTYKISK--YPSRLNRAEVDAELAKAFSVWSDYTDLTFTQKRSGQ-VHIEIRFEKGEHG 195
Query: 128 DGEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLG 186
DG+PFDG G LAH++ P G H D AE W+++ S +L VA HE GH LG
Sbjct: 196 DGDPFDGPGGTLAHAYFPVYGGDAHFDDAEMWSIN-----SRRGTNLFQVAAHEFGHSLG 250
Query: 187 LTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
L+HS V+ A+M P + D L DD+QG+Q+LYG
Sbjct: 251 LSHSDVRSALMAPFYRGYDPAFQLDQDDVQGIQSLYG 287
>gi|171846809|gb|AAI61475.1| mmp1 protein [Xenopus (Silurana) tropicalis]
Length = 381
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 78 MINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
+IN+ L D++A +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 32 IINFTPDLPQADVEAAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFSAGDHKDNSPFDG 90
Query: 135 VLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G+LAH+F P + G H D E+W K+ +L VA HE GH LGL+HS
Sbjct: 91 PGGILAHAFQPGNGIGGDAHFDEDESWT------KTSQLYNLFLVAAHEFGHSLGLSHST 144
Query: 192 VKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYP+ D L DDI +Q LYG SNP G + N+ D
Sbjct: 145 DPGALMYPSYSSTDPNAFQLPQDDINAIQYLYGKSSNPVQPTGPTTPTICDPNVVFD 201
>gi|347447629|pdb|3SHI|A Chain A, Crystal Structure Of Human Mmp1 Catalytic Domain At 2.2 A
Resolution
gi|347447630|pdb|3SHI|G Chain G, Crystal Structure Of Human Mmp1 Catalytic Domain At 2.2 A
Resolution
gi|347447631|pdb|3SHI|M Chain M, Crystal Structure Of Human Mmp1 Catalytic Domain At 2.2 A
Resolution
Length = 156
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADI 117
PRW + L+Y EN L D+ ++AF W++V P++F + + ADI
Sbjct: 1 NPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQ-ADI 54
Query: 118 RIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLE 174
I F GDH D PFDG G LAH+F P G H D E W +F +L
Sbjct: 55 MISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------REYNLH 108
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG
Sbjct: 109 RVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYG 156
>gi|296480369|tpg|DAA22484.1| TPA: matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Bos
taurus]
Length = 477
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 96/183 (52%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A + W V P++F
Sbjct: 100 FSTFPGSPKWRK---THLTY-----RIVNYTKDLPRDAVDSAIEKALTVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P SG + H D E W D
Sbjct: 152 IYEGE-ADIMIIFAIREHGDFLPFDGPGKVLAHAYPPGSGFYGDAHFDDDEQWTKDTS-- 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
++L VA HE+GH LGL HS +EA+MYP PR + L+ DD+ G+Q LYG
Sbjct: 209 ----GINLFLVAAHELGHSLGLQHSTEREALMYPVYDPRTDLTRFRLSQDDVDGIQFLYG 264
Query: 224 SNP 226
S P
Sbjct: 265 SPP 267
>gi|75832168|ref|NP_001028820.1| matrix metalloproteinase 16 precursor [Strongylocentrotus
purpuratus]
gi|62005762|gb|AAX59991.1| matrix metalloproteinase 16 [Strongylocentrotus purpuratus]
Length = 562
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+W H S F N N L ++ +RAF W V P+ F E ADI +
Sbjct: 130 KWETH-----SLTFRILNSANRLRGSESDDAIRRAFKVWEEVTPLKFTEVQGNGRADIYL 184
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPES------GKFHLDAAETWAVDFGSEKSPVAVDL 173
F +GDHGD PFDG LAH+F P+S G H D AET+ V S +L
Sbjct: 185 TFGSGDHGDQFPFDGPGFTLAHAFPPQSGWGEMDGDVHFDDAETYTV-----SSYDGTNL 239
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VA HEIGH LGL HS A+M P L DD QG+Q LYGS
Sbjct: 240 FQVAAHEIGHSLGLGHSTDSRALMAPFYAGYIPDFQLPYDDQQGIQRLYGS 290
>gi|395520436|ref|XP_003764336.1| PREDICTED: neutrophil collagenase [Sarcophilus harrisii]
Length = 502
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 22/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y L G P+W + ++Y+ +INY + D+ + ++A + W+ P+ F
Sbjct: 134 YKLTEGNPKWKK---TEITYS-----IINYTPDIPEADVDSAIEKAINIWSDPTPLKFSR 185
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
++ + ADI+I F GDHGD PFDG G+LAH+F P G H D ETW+ +
Sbjct: 186 KNNNE-ADIKISFVRGDHGDNSPFDGEGGILAHAFQPGQGIGGDVHFDEDETWSTN---- 240
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD-LALDDIQGVQALYGS 224
+L VA HE GH LGL+HS A+M+PT + L DDI G+Q +YG+
Sbjct: 241 --SRGYNLFLVAAHEFGHSLGLSHSADPGALMFPTYSFSEPSTYVLPQDDIDGIQFIYGN 298
Query: 225 NPN 227
+ N
Sbjct: 299 SNN 301
>gi|432894407|ref|XP_004075978.1| PREDICTED: collagenase 3-like [Oryzias latipes]
Length = 469
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 96/180 (53%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP + +W +H +T F N L +D+ + ++A + W++V P++F +
Sbjct: 101 EYNHFPQRLKW-KHNDLT----FRITNYTPDLKSSDVDRIIRQALNVWSAVTPLTFRKLH 155
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
D ADI I F + +HGD PFDG G+LAH++ P + G H D E W K
Sbjct: 156 D-GTADIMISFGSREHGDFNPFDGPDGLLAHAYPPGAGIGGDVHFDEDENWT------KD 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
A +L VA HE+GH LG++HS A+MY + LA DDI G+Q LYG NPN
Sbjct: 209 SSAYNLFIVAAHELGHALGMSHSSDPGALMYAAYS-YSEGFPLAEDDIDGIQDLYGPNPN 267
>gi|301610875|ref|XP_002934970.1| PREDICTED: matrix metalloproteinase-18-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 459
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYL-HIT--DIKAVFKRAFSKWASVIPVSFIE 108
+ FP P W + L+Y ++NY H+T ++ ++AF W+ V+P++F
Sbjct: 94 FSAFPRNPVWKKK---DLTY-----RILNYTSHMTRDEVDRAIEKAFKVWSDVVPLTFTR 145
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSE 165
D +DI + F +GDH D PFDG G+LAH+F+P G H DA ETW
Sbjct: 146 IYDR-VSDIEMSFASGDHKDAFPFDGPSGILAHTFAPGDNTGGDVHFDADETWT------ 198
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
+L VA HE+GH LGL HS A+MYPT + L+ DDI+G+ +LYG
Sbjct: 199 SGSAGTNLFLVAAHELGHSLGLDHSNDLSALMYPTYHYTNPNTFQLSEDDIKGIHSLYG 257
>gi|71896459|ref|NP_001025501.1| matrix metallopeptidase 1 precursor [Xenopus (Silurana) tropicalis]
gi|89268617|emb|CAJ82765.1| matrix metalloproteinase 1 (interstitial collagenase) [Xenopus
(Silurana) tropicalis]
Length = 467
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 90/177 (50%), Gaps = 16/177 (9%)
Query: 78 MINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
+IN+ L D++A +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 118 IINFTPDLPQADVEAAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFSAGDHKDNSPFDG 176
Query: 135 VLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G+LAH+F P + G H D E+W K+ +L VA HE GH LGL+HS
Sbjct: 177 PGGILAHAFQPGNGIGGDAHFDEDESWT------KTSQLYNLFLVAAHEFGHSLGLSHST 230
Query: 192 VKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYP+ D L DDI +Q LYG SNP G + N+ D
Sbjct: 231 DPGALMYPSYSSTDPNAFQLPQDDINAIQYLYGKSSNPVQPTGPTTPTICDPNVVFD 287
>gi|13124330|sp|Q63341.1|MMP12_RAT RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|1405805|emb|CAA67142.1| macrophage metalloelastase precursor [Rattus norvegicus]
Length = 465
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + + A
Sbjct: 100 PQRSRWMKRYLTYRIYNYTPD-----MKRADVDYIFQKAFQVWSDVTPLRFRKIHKGE-A 153
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F GDHGD FDG G LAH+F P G H D AETW KS +
Sbjct: 154 DITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 207
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS---NPNF 228
L VAVHE+GH LGL HS +++MYPT + L+ DDI +Q+LYG+ NP+
Sbjct: 208 LFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNPSL 267
Query: 229 T 229
T
Sbjct: 268 T 268
>gi|291327537|ref|NP_446415.2| macrophage metalloelastase preproprotein [Rattus norvegicus]
gi|149020732|gb|EDL78537.1| matrix metallopeptidase 12 [Rattus norvegicus]
Length = 477
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + + A
Sbjct: 112 PQRSRWMKRYLTYRIYNYTPD-----MKRADVDYIFQKAFQVWSDVTPLRFRKIHKGE-A 165
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F GDHGD FDG G LAH+F P G H D AETW KS +
Sbjct: 166 DITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 219
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS---NPNF 228
L VAVHE+GH LGL HS +++MYPT + L+ DDI +Q+LYG+ NP+
Sbjct: 220 LFLVAVHELGHSLGLPHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNPSL 279
Query: 229 T 229
T
Sbjct: 280 T 280
>gi|310942613|pdb|2XS4|A Chain A, Structure Of Karilysin Catalytic Mmp Domain In Complex
With Magnesium
Length = 167
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 14/153 (9%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N ++L T+ + + AF+ W+ +SFI+ + + ADI+I + G+HGDG PFDG
Sbjct: 19 NSSSHLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNT 78
Query: 137 GVLAHSFSPE------SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHS 190
G+LAH+F P +G H D E W+++ GS +DL +VA HEIGHLLG+ HS
Sbjct: 79 GILAHAFYPPPAGGNYAGHLHFDDDENWSIN-GS-----GIDLITVAAHEIGHLLGIEHS 132
Query: 191 PVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
V A+MYP +++D DD V LYG
Sbjct: 133 NVSSALMYPYYTGIKRQLD--NDDCLAVWDLYG 163
>gi|327269124|ref|XP_003219345.1| PREDICTED: macrophage metalloelastase-like [Anolis carolinensis]
Length = 268
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 91/178 (51%), Gaps = 20/178 (11%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G +W ++V L+Y + N +H + V +AF W+ V P+ F T AD
Sbjct: 96 GPAKWGKNV---LTYRIN--NYTPDMHPAKVHEVIAKAFKVWSDVTPLQFRYTRRP--AD 148
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F GDH DG PFDG G LAH+F P G H D +E W+ +FG E +L
Sbjct: 149 IEISFAYGDHRDGNPFDGRGGTLAHAFFPAPNLGGDAHFDESEYWS-EFGKE-----ANL 202
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYGSNPNFTI 230
VAVHE GH LGL HS V+ AVMY L+ DD+Q +Q LYG NF +
Sbjct: 203 FIVAVHEFGHSLGLEHSNVRGAVMYSIYTFTNPNTFRLSYDDVQRIQRLYG---NFNV 257
>gi|310942609|pdb|2XS3|A Chain A, Structure Of Karilysin Catalytic Mmp Domain
gi|310942611|pdb|2XS3|B Chain B, Structure Of Karilysin Catalytic Mmp Domain
Length = 166
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 14/153 (9%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N ++L T+ + + AF+ W+ +SFI+ + + ADI+I + G+HGDG PFDG
Sbjct: 19 NSSSHLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNT 78
Query: 137 GVLAHSFSPE------SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHS 190
G+LAH+F P +G H D E W+++ GS +DL +VA HEIGHLLG+ HS
Sbjct: 79 GILAHAFYPPPAGGNYAGHLHFDDDENWSIN-GS-----GIDLITVAAHEIGHLLGIEHS 132
Query: 191 PVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
V A+MYP +++D DD V LYG
Sbjct: 133 NVSSALMYPYYTGIKRQLD--NDDCLAVWDLYG 163
>gi|392351441|ref|XP_003750928.1| PREDICTED: matrix metalloproteinase-28-like isoform 2 [Rattus
norvegicus]
Length = 501
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGHKWYKQH----LSYRLV--NWPKSLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + I T+
Sbjct: 286 PLGRSVATQLPGKIFTDF 303
>gi|56972358|gb|AAH88120.1| Matrix metallopeptidase 12 [Rattus norvegicus]
Length = 465
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + + A
Sbjct: 100 PQRSRWMKRYLTYRIYNYTPD-----MKRADVDYIFQKAFQVWSDVTPLRFRKIHKGE-A 153
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F GDHGD FDG G LAH+F P G H D AETW KS +
Sbjct: 154 DITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 207
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS---NPNF 228
L VAVHE+GH LGL HS +++MYPT + L+ DDI +Q+LYG+ NP+
Sbjct: 208 LFLVAVHELGHSLGLPHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNPSL 267
Query: 229 T 229
T
Sbjct: 268 T 268
>gi|292621203|ref|XP_001337581.3| PREDICTED: matrix metalloproteinase-28-like [Danio rerio]
Length = 501
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L + + AF W++ + F+E ADIR+ FY+G+H DG FDG
Sbjct: 125 NWPRSLSTSQVHLAVSAAFQLWSNASGLQFLELHQGP-ADIRLAFYDGEHNDGAGNAFDG 183
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D +E W + +L V HEIGH LGL HSPV+
Sbjct: 184 PGGALAHAFFPFRGEAHFDMSERWTLS-----GYKGHNLFLVTAHEIGHTLGLVHSPVRH 238
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLV 234
A+M P K L+ DDI VQ LYG P T+ LV
Sbjct: 239 ALMSPYYKKISSNAVLSWDDITAVQQLYGKPPGDTVQQLV 278
>gi|160877869|pdb|2Z2D|A Chain A, Solution Structure Of Human Macrophage Elastase (Mmp-12)
Catalytic Domain Complexed With A Gamma-Keto Butanoic
Acid Inhibitor
Length = 164
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 5 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 58
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 59 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 112
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 113 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 164
>gi|188595815|pdb|2K2G|A Chain A, Solution Structure Of The Wild-Type Catalytic Domain Of
Human Matrix Metalloproteinase 12 (Mmp-12) In Complex
With A Tight-Binding Inhibitor
Length = 165
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 6 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 59
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 60 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 113
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 114 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 165
>gi|354467441|ref|XP_003496178.1| PREDICTED: macrophage metalloelastase [Cricetulus griseus]
gi|344239427|gb|EGV95530.1| Macrophage metalloelastase [Cricetulus griseus]
Length = 464
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 90/175 (51%), Gaps = 20/175 (11%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF--IETDDYD 113
PG +WT+H Y ++ + + D+ F++AF W+ V P+ F I T
Sbjct: 97 PGMQKWTKHHLTYRIYNYTPD-----MKREDVDRAFQKAFRVWSDVTPLRFRKIYTGQ-- 149
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVA 170
ADI I F +G HGD FDG G +AH+F P G H D AETW+ K
Sbjct: 150 -ADIMILFASGAHGDFSAFDGRGGTIAHAFYPGPGIQGDAHFDEAETWS------KGSRG 202
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
+L VAVHE+GH LGL HS +VMYP+ + L DDIQ +Q+LYGS
Sbjct: 203 TNLFLVAVHELGHSLGLRHSNNPNSVMYPSYSYVNPNTFRLPADDIQSIQSLYGS 257
>gi|148368858|ref|YP_001256988.1| mp-nase [Spodoptera litura granulovirus]
gi|147883371|gb|ABQ51980.1| mp-nase [Spodoptera litura granulovirus]
Length = 464
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 25 AVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSY---AFSKENMINY 81
+V+ K+++K S A+ TR K+ Y+ K H +T S + I
Sbjct: 60 SVKVLKKWRVKPSS---CADMTRRKRFYI---DKSVAWDHNNITWSLFTDSLPMARNIVS 113
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIET-DDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
+ D V+++ + W + V F + D+ A+I++ F GDHGDG FDG G+LA
Sbjct: 114 QELNDAFMVWQKG-TTWTNKTIVYFTQLHDNSAEANIQLAFKRGDHGDGNSFDGPGGILA 172
Query: 141 HSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
H+F P +G+ H DA E W G EK+ VDL VA HEIGH LGL HS VKEA+MY
Sbjct: 173 HAFFPPNGQLHFDADERWTTS-GYEKND-GVDLFLVAAHEIGHTLGLMHSSVKEALMYAL 230
Query: 201 LKPRDKKVDLALDDIQGVQALY 222
+ +L+ DD+ G++ LY
Sbjct: 231 YQD---TPNLSTDDVNGLEQLY 249
>gi|120586977|ref|NP_001073357.1| matrix metalloproteinase-28 precursor [Rattus norvegicus]
gi|392351439|ref|XP_003750927.1| PREDICTED: matrix metalloproteinase-28-like isoform 1 [Rattus
norvegicus]
gi|119351063|gb|ABL63427.1| matrix metalloproteinase 28 [Rattus norvegicus]
Length = 525
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGHKWYKQH----LSYRLV--NWPKSLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + I T+
Sbjct: 286 PLGRSVATQLPGKIFTDF 303
>gi|392351443|ref|XP_003750929.1| PREDICTED: matrix metalloproteinase-28-like isoform 3 [Rattus
norvegicus]
Length = 515
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGHKWYKQH----LSYRLV--NWPKSLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + I T+
Sbjct: 286 PLGRSVATQLPGKIFTDF 303
>gi|260793745|ref|XP_002591871.1| hypothetical protein BRAFLDRAFT_125518 [Branchiostoma floridae]
gi|229277083|gb|EEN47882.1| hypothetical protein BRAFLDRAFT_125518 [Branchiostoma floridae]
Length = 758
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 87/158 (55%), Gaps = 7/158 (4%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+Y F +N L + K +A WA V P++F D ADI I F +GDHGD
Sbjct: 265 LTYNF--KNFSPDLKEGEQKDAIAKALDLWAQVTPLTFTLVAPDDEADIVIQFLSGDHGD 322
Query: 129 GEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLL 185
G PFDG G L H+F P G H D AE + + E + AVD+ +VA HE GH L
Sbjct: 323 GSPFDGNGGTLGHAFFPGDGIGGDTHFDEAEVFNIVTPGEFT-TAVDMMTVAAHEFGHAL 381
Query: 186 GLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
GL HS +++A+M P + ++ L +DDI G+Q LYG
Sbjct: 382 GLGHSNIQDALMAPFYR-YSSELQLHVDDISGIQKLYG 418
>gi|75832177|ref|NP_001028823.1| matrix metalloproteinase 14 precursor [Strongylocentrotus
purpuratus]
gi|62005778|gb|AAX59992.1| matrix metalloproteinase 14 [Strongylocentrotus purpuratus]
Length = 467
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 21/208 (10%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ +A+ +TP+ + D PA+ R KK Y L RW++ L+Y N
Sbjct: 76 ETMAMMNTPRCGMVDMDS--PADMMR-KKRYAL---GSRWSK---TELTYRII--NRTPD 124
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L ++ + + KWA ++F + ADI I F G HGD PFDG GVLAH
Sbjct: 125 LPANEVDRIITESIEKWADASGLTFTLVKSGN-ADILISFAPGSHGDDNPFDGPGGVLAH 183
Query: 142 SFSPES----GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
++ P S G H D E + ++ S ++LE VAVHE GH LGL HS ++ AVM
Sbjct: 184 AYYPSSNAIGGDAHFDEDERY-----TDASFSGINLEWVAVHEFGHSLGLGHSQIEGAVM 238
Query: 198 YPTLKPRDKKVDLALDDIQGVQALYGSN 225
YP K L DDI G+QA YG N
Sbjct: 239 YPFYTGYVPKFQLNSDDIAGIQAHYGEN 266
>gi|11935132|gb|AAG41981.1| matrix metalloproteinase 28 [Homo sapiens]
Length = 520
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|119351065|gb|ABL63428.1| matrix metalloproteinase 28 [Rattus norvegicus]
Length = 507
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGHKWYKQH----LSYRLV--NWPKSLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ LYG
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLYGK 285
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + I T+
Sbjct: 286 PLGRSVATQLPGKIFTDF 303
>gi|126313949|ref|XP_001373438.1| PREDICTED: matrix metalloproteinase-28 [Monodelphis domestica]
Length = 528
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK +V GK + RH+ L N YL ++ + AF W++V + F
Sbjct: 126 RLKKRFVQQRGK-WYKRHLSYRLV------NWPEYLPEPAVRRAVQAAFQVWSNVSSLEF 178
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W+
Sbjct: 179 WEAPASSPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFFPRRGEAHFDRDERWSF---- 234
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+S +L V HEIGH LGL HSP A+M P K + L DD+ +Q LYG
Sbjct: 235 -QSRRGRNLFVVLAHEIGHTLGLGHSPAPRALMAPYYKRLGRDSVLNWDDVLAIQRLYGQ 293
Query: 225 NPNFTIGSLVESDISTNL 242
++ + + TN
Sbjct: 294 PLGGSVAEQLPGKLFTNF 311
>gi|432892834|ref|XP_004075860.1| PREDICTED: matrix metalloproteinase-28-like [Oryzias latipes]
Length = 491
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E + ADIR+ FY GDH DG FDG
Sbjct: 113 NWPQHLSRGSVRLAVQAAFQLWSNVSGLVFQEAPEGP-ADIRLTFYEGDHNDGASNAFDG 171
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D AE W ++ +L V HE+GH LGL HSPV+
Sbjct: 172 PGGTLAHAFLPRRGEAHFDMAERWTLN-----GHKGHNLFMVTAHEVGHTLGLEHSPVRH 226
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P + + + L+ DDI VQ LYG
Sbjct: 227 ALMSPYYRKLGRSLVLSWDDIVAVQQLYG 255
>gi|328780642|ref|XP_393358.4| PREDICTED: matrix metalloproteinase-14-like [Apis mellifera]
Length = 575
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 89/179 (49%), Gaps = 20/179 (11%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP- 145
+ A +AF W+ + F++ I I F G+HGDG+PFDG G LAH++ P
Sbjct: 145 VDAELNKAFKVWSEYTDLVFVQKKSGQ-VHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPV 203
Query: 146 ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
G H D AE W +D S +L VA HE GH LGL+HS VK A+M P + +
Sbjct: 204 YGGDAHFDDAEQWTID-----SFRGTNLFQVAAHEFGHSLGLSHSDVKSALMAPFYRGYE 258
Query: 206 KKVDLALDDIQGVQALYGSNPNFTIG-------------SLVESDISTNLAVDLRIKSS 251
L DDIQG+QALYG+ + G S +S++ TN VD S+
Sbjct: 259 PYFRLDEDDIQGIQALYGTKTSNNGGVPSGPKPTTTASPSEEDSELCTNSKVDTMFNSA 317
>gi|397494307|ref|XP_003818024.1| PREDICTED: matrix metalloproteinase-28 isoform 1 [Pan paniscus]
Length = 520
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|13236530|ref|NP_077278.1| matrix metalloproteinase-28 isoform 1 preproprotein [Homo sapiens]
gi|37538314|sp|Q9H239.2|MMP28_HUMAN RecName: Full=Matrix metalloproteinase-28; Short=MMP-28; AltName:
Full=Epilysin; Flags: Precursor
gi|12698338|gb|AAK01480.1|AF219624_1 matrix metalloproteinase-28 precursor [Homo sapiens]
gi|12698852|gb|AAK01706.1|AF330002_1 matrix metalloprotease MMP25 [Homo sapiens]
gi|37183092|gb|AAQ89346.1| metalloprotease [Homo sapiens]
gi|119600534|gb|EAW80128.1| matrix metallopeptidase 28, isoform CRA_a [Homo sapiens]
Length = 520
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|397494309|ref|XP_003818025.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Pan paniscus]
Length = 510
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|21730383|pdb|1JIZ|A Chain A, Crystal Structure Analysis Of Human Macrophage Elastase
Mmp- 12
gi|21730384|pdb|1JIZ|B Chain B, Crystal Structure Analysis Of Human Macrophage Elastase
Mmp- 12
Length = 166
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 6 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 59
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 60 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 113
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 114 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 165
>gi|193783707|dbj|BAG53618.1| unnamed protein product [Homo sapiens]
Length = 510
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|147901930|ref|NP_001079682.1| matrix metallopeptidase 7 (matrilysin, uterine) precursor [Xenopus
laevis]
gi|28461366|gb|AAH46939.1| MGC53510 protein [Xenopus laevis]
Length = 259
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 91/180 (50%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG PRW++ L+Y+ ++NY L + +RAF W++V P+ F
Sbjct: 90 EFRQFPGNPRWSK---AQLTYS-----IVNYTPDLRRQVVDDAIQRAFGVWSNVTPLQFT 141
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ + ADI I F HGD PFDG GVLAH++ P G H D E W
Sbjct: 142 KVSSGN-ADIFIRFGARTHGDSNPFDGPSGVLAHAYGPGRGIGGDAHFDEDERWT----- 195
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS +A+M+PT L+ DDI G+Q++YG
Sbjct: 196 -SSRAGFNLFLVAAHEFGHSLGLDHSTDPQALMFPTYHYVETTSFRLSQDDINGIQSIYG 254
>gi|406717740|emb|CCC86590.3| mmp protein [Schmidtea mediterranea]
Length = 546
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 16/154 (10%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIE-TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
L+ ++A+ RAF+ WA + +++ E T Y+ ADI I F + +HGD PFDG VLA
Sbjct: 147 LNRPQVRAIMTRAFNLWAKHVDINYTEETGYYNDADIIIEFGSKEHGDSIPFDGPNYVLA 206
Query: 141 HSFSP---------ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
H+F P SG H D E W E+ +L +VAVHE+GH +GL HS
Sbjct: 207 HAFYPIGSSSPPYSRSGDAHFDDDEFWV-----EQGRDGRNLLAVAVHELGHSMGLGHSA 261
Query: 192 VKEAVMYP-TLKPRDKKVDLALDDIQGVQALYGS 224
+ A+MYP + P + + L +DDI G+Q++YGS
Sbjct: 262 SETAIMYPFYVNPTEGNIKLDIDDINGMQSIYGS 295
>gi|109255305|ref|YP_654454.1| MP-NASE [Choristoneura occidentalis granulovirus]
gi|84683257|gb|ABC61167.1| MP-NASE [Choristoneura occidentalis granulovirus]
Length = 488
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVS-------FIET-DDYDFADIRI 119
++Y+ K+ + + + T IK + AF W I S F++ DD A+I++
Sbjct: 124 NITYSVMKKTIPDRFNSTLIKNETEFAFGVWQKAIAYSTNKNILQFVKVGDDNKEANIKV 183
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVH 179
F G+H D PFDG+ GVLAHSF P G+ H+DA E W + ++ V + VH
Sbjct: 184 LFAQGNHSDLFPFDGLGGVLAHSFPPPIGEIHIDADENWLIQNNNDDDDNGVIFLNTLVH 243
Query: 180 EIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN-----FTIGSLV 234
EIGH LGL HS ++++VMYP + D L DD+ G+ LY N N I V
Sbjct: 244 EIGHALGLYHSSLEDSVMYPYYQKNDYHT-LKTDDVNGLYELYVQNFNKPEEIIVIPDWV 302
Query: 235 ESDISTNL 242
SD+S ++
Sbjct: 303 YSDLSNSI 310
>gi|345322985|ref|XP_001510024.2| PREDICTED: matrilysin-like [Ornithorhynchus anatinus]
Length = 277
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ L PG +WT + A++ + L + + + KRAF+ W+ V + F +
Sbjct: 96 FTLIPGPKKWTSKIVTYRIAAYTSQ-----LRRSRVDFIIKRAFNMWSRVTTL-FFKRVY 149
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI IGF HGD PFDG LAH+F+P G H D E W + S
Sbjct: 150 WGPADIIIGFARRYHGDNYPFDGRGNTLAHAFAPGPDLGGDAHFDEDEKWTEGYKS---- 205
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNPN 227
++L V HE+GH LGL HS AVMYPT + L+ DDI+G+Q LYG N
Sbjct: 206 -GINLPFVVTHELGHSLGLGHSSNPNAVMYPTYNENEPWDFQLSQDDIRGIQKLYGKKRN 264
>gi|12803593|gb|AAH02631.1| MMP28 protein [Homo sapiens]
gi|60655721|gb|AAX32424.1| matrix metalloproteinase 28 [synthetic construct]
gi|119600535|gb|EAW80129.1| matrix metallopeptidase 28, isoform CRA_b [Homo sapiens]
gi|325464269|gb|ADZ15905.1| matrix metallopeptidase 28 [synthetic construct]
Length = 393
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P K + L+ DD+ VQ+LYG
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYG 284
>gi|410971809|ref|XP_003992355.1| PREDICTED: stromelysin-2 [Felis catus]
Length = 478
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 110/233 (47%), Gaps = 33/233 (14%)
Query: 13 FIIFIHESPQCIAVRSTPKF-KLKQSDKYDP--AEATRHKK-------DYVLFPGKPRWT 62
F+ H P +R KF L+ + K DP E R + + FPG P+W
Sbjct: 51 FVRRRHSGPVVKKIREMQKFLGLEVTGKLDPDTLEMIRKPRCGVPDVGQFTTFPGLPKWR 110
Query: 63 RHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+ L+Y ++NY L + + F++A W V P++F + + + ADI I
Sbjct: 111 K---THLTY-----RIVNYTLDLPREAVDSAFEKALKAWEEVTPLTFSKIYEGE-ADIMI 161
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F +HGD PFDG VLAH++ P G H D E W D KS +L V
Sbjct: 162 FFAVREHGDFIPFDGSGNVLAHAYPPGPGLDGDVHFDDDELWRED----KS--GTNLFLV 215
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNPN 227
A HE GH LGL HS A+MYP PR + LA DD+ G+Q+LYG P
Sbjct: 216 AAHEFGHSLGLYHSADPTALMYPVYNPRTDLTRFRLAQDDVNGIQSLYGPPPT 268
>gi|260798406|ref|XP_002594191.1| hypothetical protein BRAFLDRAFT_174415 [Branchiostoma floridae]
gi|229279424|gb|EEN50202.1| hypothetical protein BRAFLDRAFT_174415 [Branchiostoma floridae]
Length = 420
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
RW +H L+Y S L ++++ ++AF WA P++F + D+ +
Sbjct: 50 RWRKH---DLTYRISA--YTQDLPAFEVESAVEKAFQVWARHTPLTFTRIY-WGRPDLDV 103
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAV 178
F G+HGDG PFDG G LAH+F P+ G H D ETW V ++P DL VA
Sbjct: 104 KFSVGEHGDGNPFDGSGGELAHAFFPQYGGDAHFDDGETWTV-----RTPGGTDLFIVAA 158
Query: 179 HEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
HE GH LGL HS V+ ++M P + L DD++G+Q LYG+
Sbjct: 159 HEFGHSLGLGHSDVRGSLMAPFYQGYTPAFTLPPDDVEGIQNLYGT 204
>gi|380022447|ref|XP_003695057.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
[Apis florea]
Length = 570
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
LSY SK H D A +AF W+ + F++ I I F G+HGD
Sbjct: 124 LSYKISKYPRNLPQHKVD--AELNKAFKVWSEYTDLVFVQKKSGQ-VHIEIRFEKGEHGD 180
Query: 129 GEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
G+PFDG G LAH++ P G H D AE W +D S +L VA HE GH LGL
Sbjct: 181 GDPFDGPGGTLAHAYFPVYGGDAHFDDAEQWTID-----SFRGTNLFQVAAHEFGHSLGL 235
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG---SN---------PNFTIG-SLV 234
+HS VK A+M P + + L DDIQG+QALYG SN P T+ S
Sbjct: 236 SHSDVKSALMAPFYRGYEPXFRLDEDDIQGIQALYGVKTSNNGGVPSGPKPTTTVSPSEE 295
Query: 235 ESDISTNLAVDLRIKSS 251
+S++ TN VD S+
Sbjct: 296 DSELCTNSKVDTMFNSA 312
>gi|9506899|ref|NP_062344.1| stromelysin-2 precursor [Mus musculus]
gi|13124340|sp|O55123.1|MMP10_MOUSE RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
metalloproteinase-10; Short=MMP-10; AltName:
Full=Transin-2; Flags: Precursor
gi|2791312|emb|CAA73641.1| stromelysin 2 [Mus musculus]
gi|12860835|dbj|BAB32058.1| unnamed protein product [Mus musculus]
gi|120538365|gb|AAI30028.1| Matrix metallopeptidase 10 [Mus musculus]
gi|148692989|gb|EDL24936.1| mCG9885 [Mus musculus]
Length = 476
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + ++Y ++NY L + + ++A W V P++F
Sbjct: 100 FSTFPGSPKWRKS---HITY-----RIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG LAH++ P G + H D E W +
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDDEKWTL----- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD--LALDDIQGVQALYG 223
+P +L VA HE+GH LGL HS KE++MYP + + L+ DDI+G+Q+LYG
Sbjct: 206 -APSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIEGIQSLYG 264
Query: 224 SNPN 227
+ P+
Sbjct: 265 AGPS 268
>gi|392927615|ref|NP_510112.2| Protein H36L18.1 [Caenorhabditis elegans]
gi|242334910|emb|CAB08559.4| Protein H36L18.1 [Caenorhabditis elegans]
Length = 420
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYD--FADIRIGFYNGDHGDGEPFDGVLGVL 139
+ ++ KAVF RAF+ W + F+ DD D A+I I F GDH DGEPFDG +L
Sbjct: 55 MSLSQQKAVFARAFATWEEHTRLWFVAVDDEDEQKANIDIVFAAGDHEDGEPFDGKGNIL 114
Query: 140 AHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
AH+F P G H D E W+ + VDL +VAVHEIGH LGL HS ++M
Sbjct: 115 AHAFFPRYGGDVHFDEDELWSAN-----KTKGVDLYAVAVHEIGHSLGLKHSSNHLSIMA 169
Query: 199 PTLKPRDKKV-DLALDDIQGVQALYGS 224
P K V L DDI V+ LYG+
Sbjct: 170 PFYKQYTGAVMHLHQDDISAVKRLYGA 196
>gi|328724695|ref|XP_003248224.1| PREDICTED: matrix metalloproteinase-16-like isoform 3
[Acyrthosiphon pisum]
Length = 583
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+Y SK + L ++ + ++AF W+ V P++F I I F G+HGD
Sbjct: 123 LTYKISKYPKL--LGKSETDSEIRKAFDVWSDVTPLTFTHKKSGQ-VHIEIRFEKGEHGD 179
Query: 129 GEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
G+PFDG G LAH+F P G H D +E W++ GS K +L VA HE GH LGL
Sbjct: 180 GDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSI--GSFK---GTNLFQVAAHEFGHSLGL 234
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTN 241
+HS V+ A+M P + + +L DD++ +QALYG++ T G D ST+
Sbjct: 235 SHSDVRSALMAPFYRGYNPSFNLDSDDVEAIQALYGAS---TSGESDNDDDSTS 285
>gi|444724333|gb|ELW64940.1| Interstitial collagenase [Tupaia chinensis]
Length = 466
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 98/204 (48%), Gaps = 22/204 (10%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
YVL G P W +H +T +INY L D+ ++AF W+ ++F +
Sbjct: 101 YVLTWGNPHW-KHRNLTY-------RIINYTPDLPREDVDCAIEKAFDLWSKATVLTFTK 152
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
+ + ADI + F GDH D PF+G G LAH+F P + G HLD ETW DF
Sbjct: 153 VHEGE-ADILLSFLRGDHHDNSPFNGPGGQLAHAFQPGAGLGGDVHLDEDETWTDDFRD- 210
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
+L V HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG +
Sbjct: 211 -----YNLLQVVAHELGHSLGLSHSKDIGALMYPNYI-FTGDVLLSQDDIDGIQAIYGPS 264
Query: 226 PNFTIGSLVESDISTNLAVDLRIK 249
N G T L D K
Sbjct: 265 KNPITGPRTPQICDTKLTFDAVTK 288
>gi|444720975|gb|ELW61735.1| Matrix metalloproteinase-28 [Tupaia chinensis]
Length = 521
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDLDERWSLS----RRRRGRNLFVVLAHEIGHTLGLTHSPAPR 256
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+M P K + L+ DD+ VQ+LYG
Sbjct: 257 ALMAPYYKKLGRDSLLSWDDVLAVQSLYG 285
>gi|345323018|ref|XP_001509876.2| PREDICTED: collagenase 3-like [Ornithorhynchus anatinus]
Length = 552
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 98/197 (49%), Gaps = 24/197 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ LFP K +W H L+Y + N L + + AF W+ ++F
Sbjct: 112 EFNLFPRKLKWLTH---NLTYRIT--NYTQDLSQETVDQAIQGAFKAWSDESLLNFTRIS 166
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI I F +HGD PFDG LG LAH+F P G H D E W DF
Sbjct: 167 R-GTADIMIAFGTKEHGDFFPFDGPLGKLAHAFPPGRGLGGDIHFDDDEIWTNDF----- 220
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD-LALDDIQGVQALYG--- 223
A +L +VA HE+GH LGL HS E++MYP K + + L+ DDI+G++ALYG
Sbjct: 221 -KAFNLFAVAAHELGHALGLQHSSDPESLMYPIYKYTHPQGNILSEDDIKGIRALYGIGS 279
Query: 224 -----SNPNFTIGSLVE 235
+PNFT+ ++
Sbjct: 280 KAPKKCDPNFTVDAITN 296
>gi|323482766|gb|ADX86814.1| matrix metalloproteinase 3 [Mauremys mutica]
gi|331686391|gb|AED87074.1| matrix metalloproteinase 3 [Mauremys mutica]
Length = 481
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 90/176 (51%), Gaps = 22/176 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG PRWT+ L Y ++NY + D+ ++A++ W+SV P+ F +
Sbjct: 107 FPGSPRWTK---TDLKY-----RILNYTPDMEPADVDEAIEKAWNVWSSVTPLKFTRVYE 158
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F G HGD FDGV G LAH+++P G H D E W D
Sbjct: 159 GN-ADIMISFAAGFHGDFFSFDGVGGTLAHAYAPGEGIGGDAHFDEDEYWTKDLK----- 212
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT-LKPRDKKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS V ++MYP L+ + L DD+ G+Q LYG
Sbjct: 213 -GFNLFLVAAHEFGHSLGLHHSNVLGSLMYPAYLQTETRNYRLPQDDVDGIQTLYG 267
>gi|358335193|dbj|GAA53703.1| matrix metalloproteinase-25 [Clonorchis sinensis]
Length = 585
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R K Y++ K +W + L++ + YL VF+ F+ W+ VI + F
Sbjct: 158 RRIKRYLIGDEKMKWAKK---KLTWQI-RSYPSRYLSRARTYGVFQHTFNLWSKVIDLDF 213
Query: 107 IETDDY-DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-------SGKFHLDAAETW 158
+E DY ADI I F G HGD PFDG GVLAH+F P +G H D ETW
Sbjct: 214 VEEKDYYKEADIVIQFGAGKHGDSIPFDGEGGVLAHAFYPTPNNVYSFAGDAHFDDDETW 273
Query: 159 AVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
+E +L SVA HE+GH +GL HS V A+MYP +V L DDI G+
Sbjct: 274 NDGPHNEYR----NLVSVAAHELGHSMGLGHSTVPTAIMYPYYIGTWDRVKLDEDDIVGM 329
Query: 219 QALYGS 224
Q +YG+
Sbjct: 330 QQIYGA 335
>gi|331284133|ref|NP_001193566.1| stromelysin-1 precursor [Bos taurus]
Length = 477
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A + W P++F
Sbjct: 100 FSTFPGSPKWRK---THLTY-----RIVNYTKDLPRDAVDSAIEKALTVWEEATPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P SG + H D E W D
Sbjct: 152 IYEGE-ADIMIIFAIREHGDFLPFDGPGKVLAHAYPPGSGFYGDAHFDDDEQWTKDTS-- 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
++L VA HE+GH LGL HS +EA+MYP PR + L+ DD+ G+Q LYG
Sbjct: 209 ----GINLFLVAAHELGHSLGLQHSTEREALMYPVYDPRTDLTRFRLSQDDVDGIQFLYG 264
Query: 224 SNP 226
S P
Sbjct: 265 SPP 267
>gi|328724691|ref|XP_001949484.2| PREDICTED: matrix metalloproteinase-16-like isoform 1
[Acyrthosiphon pisum]
Length = 547
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+Y SK + L ++ + ++AF W+ V P++F I I F G+HGD
Sbjct: 123 LTYKISKYPKL--LGKSETDSEIRKAFDVWSDVTPLTFTHKKSGQ-VHIEIRFEKGEHGD 179
Query: 129 GEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
G+PFDG G LAH+F P G H D +E W++ GS K +L VA HE GH LGL
Sbjct: 180 GDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSI--GSFK---GTNLFQVAAHEFGHSLGL 234
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTN 241
+HS V+ A+M P + + +L DD++ +QALYG++ T G D ST+
Sbjct: 235 SHSDVRSALMAPFYRGYNPSFNLDSDDVEAIQALYGAS---TSGESDNDDDSTS 285
>gi|26354416|dbj|BAC40836.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDTHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|74151801|dbj|BAE29689.1| unnamed protein product [Mus musculus]
gi|74181547|dbj|BAE30039.1| unnamed protein product [Mus musculus]
gi|74191355|dbj|BAE30260.1| unnamed protein product [Mus musculus]
gi|74207241|dbj|BAE30809.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|301773282|ref|XP_002922067.1| PREDICTED: matrilysin-like [Ailuropoda melanoleuca]
Length = 267
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP +P+W V +++ + L + + +A + W+ IP+SF
Sbjct: 94 EYSLFPAQPKWVSSVVTYRIVSYTPD-----LPRVRVNQLVAKALAMWSQEIPLSFRRVL 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI I F G HGD PFDG LAH+F+P G H D E W ++ S
Sbjct: 149 -AGTADIMISFARGAHGDYNPFDGPGNTLAHAFAPGPGLGGDAHFDEDEHW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
V+ A HE+GH LGL HS AVMYP + D K LA DDI+G++ LYG
Sbjct: 203 RTGVNFLITATHELGHSLGLGHSSDPNAVMYPAYRVGDPKNFKLAPDDIKGIRKLYGEKS 262
Query: 227 NFT 229
N T
Sbjct: 263 NST 265
>gi|74212952|dbj|BAE33415.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|148692986|gb|EDL24933.1| matrix metallopeptidase 12 [Mus musculus]
Length = 462
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 97 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 150
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 151 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 204
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 205 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 257
>gi|26354522|dbj|BAC40889.1| unnamed protein product [Mus musculus]
Length = 462
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 97 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 150
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW KS +
Sbjct: 151 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 204
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 205 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 257
>gi|326674250|ref|XP_003200101.1| PREDICTED: matrix metalloproteinase-20-like [Danio rerio]
Length = 490
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 93/203 (45%), Gaps = 28/203 (13%)
Query: 24 IAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH 83
+AV TP+ + + Y R KK+ + + G R+T +P
Sbjct: 92 LAVMRTPRCGVSDVEDYSHRRGNRWKKNIITY-GVGRYTNDLP----------------- 133
Query: 84 ITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSF 143
+ + + A WA P++F+ + + ADI + F +HGD PFDG G LAH+F
Sbjct: 134 VNAVDDLISSALDVWAKASPLTFLRSYSHQ-ADIMVEFVGKEHGDFFPFDGPDGTLAHAF 192
Query: 144 SPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
P G H D AE W + +L VA HE GH LGL HS + E+VMYPT
Sbjct: 193 GPGEGIGGDVHFDEAEVWTAGYN------GFNLYVVAAHEFGHALGLKHSQLPESVMYPT 246
Query: 201 LKPRDKKVDLALDDIQGVQALYG 223
K R L+ +DI + LYG
Sbjct: 247 YKRRKTHNLLSSEDITNINTLYG 269
>gi|402899384|ref|XP_003912678.1| PREDICTED: matrix metalloproteinase-28 isoform 1 [Papio anubis]
Length = 520
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|328724693|ref|XP_003248223.1| PREDICTED: matrix metalloproteinase-16-like isoform 2
[Acyrthosiphon pisum]
Length = 557
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+Y SK + L ++ + ++AF W+ V P++F I I F G+HGD
Sbjct: 123 LTYKISKYPKL--LGKSETDSEIRKAFDVWSDVTPLTFTHKKSGQ-VHIEIRFEKGEHGD 179
Query: 129 GEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
G+PFDG G LAH+F P G H D +E W++ GS K +L VA HE GH LGL
Sbjct: 180 GDPFDGPGGTLAHAFFPVYGGDAHFDDSEKWSI--GSFK---GTNLFQVAAHEFGHSLGL 234
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTN 241
+HS V+ A+M P + + +L DD++ +QALYG++ T G D ST+
Sbjct: 235 SHSDVRSALMAPFYRGYNPSFNLDSDDVEAIQALYGAS---TSGESDNDDDSTS 285
>gi|342350921|pdb|3AYU|A Chain A, Crystal Structure Of Mmp-2 Active Site Mutant In Complex
With App- Drived Decapeptide Inhibitor
Length = 167
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 95/182 (52%), Gaps = 21/182 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV---FKRAFSKWASVIPVSFIE 108
Y FP KP+W ++ ++Y +I Y D + V F RAF W+ V P+ F
Sbjct: 1 YNFFPRKPKWDKN---QITY-----RIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
D + ADI I F +HGDG PFDG G+LAH+F+P + G H D E W + G
Sbjct: 53 IHDGE-ADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGKG-- 109
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
V L VA H GH +GL HS A+M P + K L+ DDI+G+Q LYG++
Sbjct: 110 ---VGYSLFLVAAHAFGHAMGLEHSQDPGALMAP-IYTYTKNFRLSQDDIKGIQELYGAS 165
Query: 226 PN 227
P+
Sbjct: 166 PD 167
>gi|26354570|dbj|BAC40913.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW KS +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|4520361|dbj|BAA75922.1| matrix metalloproteinase-12 [Oryctolagus cuniculus]
Length = 464
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG+P W +H + +N + D++ ++AF W+ V P+ F + + A
Sbjct: 99 PGRPVWRKHY-----ITYRIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFRKITTGE-A 152
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F +G HGD FDG GV+AH+F P G H D E W+ KS +
Sbjct: 153 DIMILFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWS------KSYKGTN 206
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +A+M+PT D L+ DDI+G+Q+LYG
Sbjct: 207 LFLVAVHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLYGG 259
>gi|115392138|ref|NP_032631.3| macrophage metalloelastase precursor [Mus musculus]
gi|152031638|sp|P34960.3|MMP12_MOUSE RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|26354881|dbj|BAC41067.1| unnamed protein product [Mus musculus]
gi|74142802|dbj|BAE42446.1| unnamed protein product [Mus musculus]
gi|74142832|dbj|BAE42457.1| unnamed protein product [Mus musculus]
gi|74142834|dbj|BAE42458.1| unnamed protein product [Mus musculus]
gi|74142836|dbj|BAE42459.1| unnamed protein product [Mus musculus]
gi|74142838|dbj|BAE42460.1| unnamed protein product [Mus musculus]
gi|74142866|dbj|BAE42472.1| unnamed protein product [Mus musculus]
gi|74142870|dbj|BAE42474.1| unnamed protein product [Mus musculus]
gi|74142874|dbj|BAE42476.1| unnamed protein product [Mus musculus]
gi|74142878|dbj|BAE42478.1| unnamed protein product [Mus musculus]
gi|74142948|dbj|BAE42502.1| unnamed protein product [Mus musculus]
gi|74142986|dbj|BAE42516.1| unnamed protein product [Mus musculus]
gi|74143029|dbj|BAE42531.1| unnamed protein product [Mus musculus]
gi|74212943|dbj|BAE33411.1| unnamed protein product [Mus musculus]
gi|74212950|dbj|BAE33414.1| unnamed protein product [Mus musculus]
gi|74213230|dbj|BAE41746.1| unnamed protein product [Mus musculus]
gi|74214940|dbj|BAE33469.1| unnamed protein product [Mus musculus]
gi|74218123|dbj|BAE42035.1| unnamed protein product [Mus musculus]
gi|74218134|dbj|BAE42039.1| unnamed protein product [Mus musculus]
gi|74221350|dbj|BAE42154.1| unnamed protein product [Mus musculus]
gi|74221403|dbj|BAE42177.1| unnamed protein product [Mus musculus]
gi|74222891|dbj|BAE42294.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|297272410|ref|XP_001114445.2| PREDICTED: matrix metalloproteinase-28 isoform 1 [Macaca mulatta]
Length = 520
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|332264806|ref|XP_003281419.1| PREDICTED: matrix metalloproteinase-28 isoform 1 [Nomascus
leucogenys]
Length = 520
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|26354408|dbj|BAC40832.1| unnamed protein product [Mus musculus]
Length = 339
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 97/194 (50%), Gaps = 18/194 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW KS +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS--NPNFT 229
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LY N
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYVHVVNKEVC 275
Query: 230 IGSLVESDISTNLA 243
SL ++ S N+
Sbjct: 276 FSSLFFTNSSINVC 289
>gi|74222658|dbj|BAE42201.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|74213223|dbj|BAE41743.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|74142899|dbj|BAE42486.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|426238617|ref|XP_004013246.1| PREDICTED: matrix metalloproteinase-28 [Ovis aries]
Length = 531
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG-- 129
A+ N +L ++ + AF W++V + F E ADIR+ F+ GDH DG
Sbjct: 150 AYRLVNWPQHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLAFFQGDHNDGLS 209
Query: 130 EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTH 189
FDG G LAH+F P G+ H D E W++ + +L V HEIGH LGLTH
Sbjct: 210 NAFDGPGGALAHAFLPRRGEAHFDRDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTH 264
Query: 190 SPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
S A+M P K + L+ DD+ VQ+LYG ++ + + + T+
Sbjct: 265 SAAPRALMAPYYKRLGRDALLSWDDVLAVQSLYGKPQGGSVATQLPGKLFTDF 317
>gi|156395021|ref|XP_001636910.1| predicted protein [Nematostella vectensis]
gi|156224018|gb|EDO44847.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 89 AVFKRAFSKWASVIPVSFIETDDYDFADIRIGF-YNGDHGDGEPFDGVLGVLAHSFSPES 147
VF +A WA V +SF T D+ AD+RI F Y G PFDG GVLAH+F P
Sbjct: 92 GVFAKALDYWARVSGLSFSRTMDFQNADLRISFGYKSHSGCASPFDGPGGVLAHAFFPHD 151
Query: 148 GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK 207
G+ H D E + ++ + +L VA HE GH LGL HS V+ A+M+P
Sbjct: 152 GRAHFDEDENF-----TDGTSQGTNLLWVATHEFGHSLGLDHSNVQSAIMFPYYGLYRPD 206
Query: 208 VDLALDDIQGVQALYG 223
+DL DDIQG+++LYG
Sbjct: 207 LDLHEDDIQGIRSLYG 222
>gi|355568428|gb|EHH24709.1| Matrix metalloproteinase-28 [Macaca mulatta]
gi|355753928|gb|EHH57893.1| Matrix metalloproteinase-28 [Macaca fascicularis]
Length = 533
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 154 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 213
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 214 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 268
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 269 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 316
>gi|301610877|ref|XP_002934977.1| PREDICTED: stromelysin-1-like [Xenopus (Silurana) tropicalis]
Length = 852
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N + ++ ++AF W+ V +F D + ++I I F + DH D PFDG
Sbjct: 119 NYTTTMAKNEVDWAIQKAFKIWSDVTLFTFTRIYD-NVSNIEISFVSRDHNDHHPFDGPS 177
Query: 137 GVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAV 196
G+LAH+F+P++G+ H D E W E +L +VA HEIGHLLGL HS AV
Sbjct: 178 GILAHAFAPKNGQLHFDNDEKWTNGSHGE------NLFNVATHEIGHLLGLYHSNDSNAV 231
Query: 197 MYPTLKPRD-KKVDLALDDIQGVQALYGSNPN 227
MY + D + L+ DDI G+Q+LYG N
Sbjct: 232 MYQFYREVDPNALQLSKDDIDGIQSLYGVKKN 263
>gi|402899386|ref|XP_003912679.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Papio anubis]
Length = 510
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|268576402|ref|XP_002643181.1| Hypothetical protein CBG24150 [Caenorhabditis briggsae]
Length = 214
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 93 RAFSKWASVIPVSFIETDDYDFA----DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG 148
RAF++W++V V F E + DI I F G+H DG FDG GV+AH+F P G
Sbjct: 3 RAFNEWSAVSSVDFREIPPDVISRIPPDIHIAFEKGEHSDGFSFDGQDGVVAHAFYPRDG 62
Query: 149 KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV 208
+ H DA E W+++ SP V+L AVHEIGHLLGL HS A M+ +P D
Sbjct: 63 RLHFDAEEQWSLN-----SPEGVNLFQTAVHEIGHLLGLEHSVDTRAAMFAAKRPYDPAF 117
Query: 209 DLALDDIQGVQALY 222
L DD++ +++L+
Sbjct: 118 TLGDDDVRAIRSLF 131
>gi|297272408|ref|XP_002800423.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Macaca mulatta]
Length = 510
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|449269763|gb|EMC80514.1| Interstitial collagenase, partial [Columba livia]
Length = 431
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 93/187 (49%), Gaps = 20/187 (10%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ Y FP P+WT+ ++Y ++NY + D+ RAF W+SV P+ F
Sbjct: 64 RSYSTFPQSPKWTKE---DVTY-----RILNYTPDMLQADVDEAIARAFQLWSSVTPLRF 115
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG---KFHLDAAETWAVDFG 163
ADI I F G HGD FDG G LAH++ P +G H D E W
Sbjct: 116 TRLYSGQ-ADIMISFAAGFHGDFYSFDGPGGTLAHAYPPGNGIGGDAHFDEDENWT---- 170
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALY 222
+ +L VA HE+GH LGL HS V A+MYP P+D + L DDI G+QALY
Sbjct: 171 KFTTYSGYNLFLVAAHELGHSLGLGHSNVFGALMYPIYMPKDTRDYRLPQDDIDGIQALY 230
Query: 223 GSNPNFT 229
+ P+ T
Sbjct: 231 ETTPSKT 237
>gi|441677898|ref|XP_004092767.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Nomascus
leucogenys]
Length = 510
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPERLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>gi|74196364|dbj|BAE33072.1| unnamed protein product [Mus musculus]
Length = 473
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYFNPSTFRLSADDIRNIQSLYGA 268
>gi|345800008|ref|XP_546546.3| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase [Canis
lupus familiaris]
Length = 468
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 11/155 (7%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
EN L ++ + ++AF W++V P++F + + ADI I F GDH D PFDG
Sbjct: 118 ENYTPDLPRAEVDSAIEKAFQLWSNVSPLTFTKVFEGQ-ADIMISFVWGDHRDNSPFDGP 176
Query: 136 LGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
G LAH+F P G H D ETW +F + +L VA HE+GH LGL+HS
Sbjct: 177 NGNLAHAFQPGPNLGGDIHFDEDETWTNNFRN------YNLYRVAAHELGHSLGLSHSTD 230
Query: 193 KEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
A+MYP V L+ DDI G+QA+YG + N
Sbjct: 231 IGALMYPNYM-YSGNVQLSQDDINGIQAIYGPSQN 264
>gi|441677901|ref|XP_004092768.1| PREDICTED: matrix metalloproteinase-28 isoform 3 [Nomascus
leucogenys]
Length = 393
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFS 144
++ + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F
Sbjct: 151 VRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHAFL 210
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P G+ H D E W++ + +L V HEIGH LGLTHSP A+M P K
Sbjct: 211 PRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRL 265
Query: 205 DKKVDLALDDIQGVQALYG 223
+ L+ DD+ VQ+LYG
Sbjct: 266 GRDALLSWDDVLAVQSLYG 284
>gi|348574175|ref|XP_003472866.1| PREDICTED: collagenase 3-like [Cavia porcellus]
Length = 471
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+SV P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMAPSEVEKAFKKAFKVWSSVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D E W
Sbjct: 155 RLHE-GTADIMISFGTKEHGDYYPFDGPSGLLAHAFPPGPNYGGDAHFDDDEYWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P DK L DD+QG+Q+LYG
Sbjct: 209 -DSSKGYNLFLVAAHELGHSLGLEHSRDPGALMFPVYTYTDKSHFVLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|403262925|ref|XP_003923815.1| PREDICTED: macrophage metalloelastase [Saimiri boliviensis
boliviensis]
Length = 468
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W +H +S N ++ D+ ++AF W++V P+ F + + AD
Sbjct: 105 GRPVWKKHY-----ITYSIHNYTPDMNHEDVDYTIQKAFQVWSNVSPLKFSKINT-GVAD 158
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I + F G HGD FDG GV+AH+F P G H D E W ++ +L
Sbjct: 159 IVMFFARGAHGDYNAFDGRGGVIAHAFGPGDGIGGDTHFDEDEFWTIN------SKGTNL 212
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VAVHEIGH LGL HS A+M+PT K D L+ DDI+G+Q+LYG
Sbjct: 213 FLVAVHEIGHSLGLGHSNDPNAIMFPTYKYVDLSTFRLSADDIRGIQSLYG 263
>gi|344285302|ref|XP_003414401.1| PREDICTED: matrix metalloproteinase-28-like [Loxodonta africana]
Length = 648
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 269 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 328
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ S +L V HEIGH LGL HSP
Sbjct: 329 PGGALAHAFLPRRGEAHFDLDERWSLS-----SRRGRNLFVVVAHEIGHTLGLPHSPAPR 383
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 384 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 431
>gi|194217260|ref|XP_001917946.1| PREDICTED: matrix metalloproteinase-28, partial [Equus caballus]
Length = 501
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 122 NWPQHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 181
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGL+HSP
Sbjct: 182 PGGALAHAFLPRRGEAHFDRDERWSLSRRRGR-----NLFVVLAHEIGHTLGLSHSPAPR 236
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
A+M P K + L+ DD+ VQ+LYG ++ + + T+
Sbjct: 237 ALMAPYYKKLGRDALLSWDDVLAVQSLYGKPQGGSVAIQLPGKLFTDF 284
>gi|109108478|ref|XP_001098794.1| PREDICTED: collagenase 3 isoform 2 [Macaca mulatta]
Length = 489
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|344287825|ref|XP_003415652.1| PREDICTED: stromelysin-1-like [Loxodonta africana]
Length = 477
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + A ++A W V P++F
Sbjct: 100 FTTFPGSPKWRK---THLTY-----RIVNYTLDLPRDAVDAAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
++ + ADI I F +HGD PFDG VLAH+++P +G H D E W D
Sbjct: 152 NNEGE-ADIMISFAVREHGDFIPFDGPGKVLAHAYAPGPGLNGDAHFDDDEQWTED---- 206
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HEIGH LGL HS EA+MYP P + L+ DD+ G+QALYG
Sbjct: 207 --KRGTNLFLVAGHEIGHSLGLFHSTNPEALMYPVYNPLTDLARFHLSQDDVNGIQALYG 264
Query: 224 SNP 226
P
Sbjct: 265 PPP 267
>gi|410910720|ref|XP_003968838.1| PREDICTED: matrix metalloproteinase-23-like [Takifugu rubripes]
Length = 347
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE- 108
K YV+ P +W H ++Y K N L++ D + AF+KW+ V P++F E
Sbjct: 26 KRYVINPLGHKWRHH---NITYRILK--FPNTLNVDDTRKAIGIAFAKWSGVSPLTFTEV 80
Query: 109 TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
T+ DI IGFY +H D FDG+ G LAH+F P G+ H D E W +
Sbjct: 81 TNSNTTVDISIGFYTFNHTDCWWSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWILGK 140
Query: 162 --FGSEKSPVAV--DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQG 217
F ++ V DL VA HEIGH LGL HS A+M+P ++ ++A DD+ G
Sbjct: 141 SRFSWKQGTVVWLNDLVQVAAHEIGHALGLWHSRDPTALMHPNATYTGQR-NVAQDDVWG 199
Query: 218 VQALYGS 224
+Q LYG
Sbjct: 200 IQRLYGC 206
>gi|6981214|ref|NP_036996.1| matrilysin precursor [Rattus norvegicus]
gi|1705982|sp|P50280.1|MMP7_RAT RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|402493|gb|AAA99432.1| matrilysin [Rattus norvegicus]
gi|40555747|gb|AAH64657.1| Matrix metallopeptidase 7 [Rattus norvegicus]
gi|149020720|gb|EDL78525.1| matrix metallopeptidase 7 [Rattus norvegicus]
Length = 267
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ L P P+W +T ++ +L + + KRA W+ IP++F
Sbjct: 97 EFSLMPNSPKWHSRT-VTYRIVSYTTDLPRFL----VDQIVKRALRMWSMQIPLNFKRVS 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF GDHGD PFDG L H+F+P G H D E W ++
Sbjct: 152 -WGTADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYW-----TDGE 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
V+ VA HE+GH LGL HS V +VMYPT + D D +L DDI G+Q LYG
Sbjct: 206 DSGVNFLFVATHELGHSLGLGHSSVPSSVMYPTYQ-GDHSEDFSLTKDDIAGIQKLYG 262
>gi|62897633|dbj|BAD96756.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
Length = 338
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SG 148
++AF W++V P++F + + ADI I F GDH D PFDG G LAH+F P G
Sbjct: 4 EKAFQLWSNVTPLTFTKVSEGQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGG 62
Query: 149 KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV 208
H D E W +F +L VA HE+GH LGL+HS A+MYP+ V
Sbjct: 63 DAHFDEDERWTNNF------REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDV 115
Query: 209 DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
LA DDI G+QA+YG NP IG + L D
Sbjct: 116 QLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFD 154
>gi|26354562|dbj|BAC40909.1| unnamed protein product [Mus musculus]
gi|74215233|dbj|BAE41839.1| unnamed protein product [Mus musculus]
Length = 403
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 38 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 91
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 92 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 145
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 146 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 198
>gi|26354436|dbj|BAC40846.1| unnamed protein product [Mus musculus]
Length = 319
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 16/172 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW KS +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYG 267
>gi|351709967|gb|EHB12886.1| Interstitial collagenase, partial [Heterocephalus glaber]
Length = 446
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 92/187 (49%), Gaps = 12/187 (6%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ PG PRW + L+Y +N L + ++ F++AF W+ V P++F
Sbjct: 71 FTTMPGGPRWNKK---DLTYRI--KNFTPDLPRSVVENAFEKAFRLWSDVSPLTFTRIF- 124
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F G HGD PFDG LAH+F P G H D E W+ + + K
Sbjct: 125 WGEADIMISFTRGAHGDNNPFDGPGDTLAHAFGPGPRLGGDAHFDEDEMWSNEKWT-KDL 183
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
++L A HE GH LGL HS E++MYP + V L DDI G+Q LYG P
Sbjct: 184 SKINLYLTAAHEFGHSLGLGHSSDTESLMYPVYS-YNGNVQLGQDDIDGIQKLYGP-PKI 241
Query: 229 TIGSLVE 235
+G E
Sbjct: 242 PLGGEEE 248
>gi|14030785|ref|NP_114395.1| interstitial collagenase A precursor [Mus musculus]
gi|78099009|sp|Q9EPL5.1|MMP1A_MOUSE RecName: Full=Interstitial collagenase A; AltName: Full=Matrix
metalloproteinase-1a; Short=MMP-1a; AltName:
Full=Mcol-A; Flags: Precursor
gi|11877304|emb|CAC18880.1| putative matrix metalloproteinase [Mus musculus]
gi|26340288|dbj|BAC33807.1| unnamed protein product [Mus musculus]
gi|28300432|gb|AAO37582.1| collagenase-like A [Mus musculus]
gi|109734590|gb|AAI17757.1| Matrix metallopeptidase 1a (interstitial collagenase) [Mus
musculus]
Length = 464
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 32 FKLKQSDKYDPAEATRHKKD---------YVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
F LK + DP KK Y + PRWT+ +S N YL
Sbjct: 68 FGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTK-----THLTYSILNYTPYL 122
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
++ RAF W+ V P++F + + DI + F+ GDHGD PFDG LAH+
Sbjct: 123 PKAVVEDAIARAFRVWSDVTPLTFQRVFEEE-GDIVLSFHRGDHGDNNPFDGPNYKLAHT 181
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D ETW S +L V HE+GH LGLTHS A+M+P
Sbjct: 182 FQPGPGLGGDVHYDLDETWT------NSSENFNLFYVTAHELGHSLGLTHSSDIGALMFP 235
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ + L DDI +Q LYG +PN
Sbjct: 236 SYTWYTEDFVLNQDDINRIQDLYGPSPN 263
>gi|148683757|gb|EDL15704.1| matrix metallopeptidase 28 (epilysin), isoform CRA_a [Mus musculus]
Length = 470
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDGDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ+LY
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQSLY 283
>gi|109108476|ref|XP_001098996.1| PREDICTED: collagenase 3 isoform 4 [Macaca mulatta]
Length = 471
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|449269767|gb|EMC80518.1| Matrilysin, partial [Columba livia]
Length = 258
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 93/182 (51%), Gaps = 26/182 (14%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y F G PRW + + L+Y ++NY L + +RAF W+ V P+ F
Sbjct: 93 EYATFSGSPRWKKTL---LTY-----KIVNYTPDLSQKKVDDAIRRAFMVWSDVTPLRFK 144
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ Y ADI IGF HGDG PFDG LAH+F+P G H D E W+
Sbjct: 145 KVF-YGHADIVIGFARRAHGDGYPFDGRGNTLAHAFAPGEGLGGDTHFDDDEIWS----- 198
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT---LKPRDKKVDLALDDIQGVQAL 221
++ V+L VA HE GH LGL HS V A+MYP + P K L+ DD +G+Q L
Sbjct: 199 -ETNREVNLFLVAAHEFGHSLGLDHSNVHGALMYPIYSYVNPATFK--LSEDDKRGIQKL 255
Query: 222 YG 223
YG
Sbjct: 256 YG 257
>gi|50950195|ref|NP_001002967.1| stromelysin-1 precursor [Canis lupus familiaris]
gi|62900543|sp|Q6Y4Q5.1|MMP3_CANFA RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; Flags: Precursor
gi|34391862|gb|AAO63580.1| stromelysin 1 [Canis lupus familiaris]
Length = 478
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG P+W + L+Y ++NY L + + ++A + W V P++F
Sbjct: 99 DFTTFPGMPKWRK---THLTY-----RIMNYTPDLPRDAVDSAIEKALNVWKEVTPLTFS 150
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGS 164
TD+ + ADI+I F DHGD PFDG VL H++ P G + H D E W D
Sbjct: 151 RTDEGE-ADIKISFAVRDHGDFNPFDGPGNVLGHAYPPGPGIYGDAHFDDDEQWTSDTS- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK--PRDKKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYP + L+ DD+ G+Q+LY
Sbjct: 209 -----GTNLFLVAAHELGHSLGLFHSADPSALMYPVYNVLADLARFHLSQDDVNGIQSLY 263
Query: 223 GSNPN 227
G P+
Sbjct: 264 GGPPS 268
>gi|348574169|ref|XP_003472863.1| PREDICTED: macrophage metalloelastase-like [Cavia porcellus]
Length = 464
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
+ D+ ++AF W+ V P+ F + + + ADI I F G+HGD PFDG GVLAH
Sbjct: 120 MRRQDVDDAIQKAFQVWSDVTPLKFRKINVGE-ADIMIFFAYGEHGDFNPFDGQDGVLAH 178
Query: 142 SFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D AETW+ +F + +L VAVHE GH LGL HS + A+M+
Sbjct: 179 AFGPGIGRGGDAHFDEAETWSTNFKGK------NLFLVAVHEFGHSLGLGHSSDRNAIMF 232
Query: 199 PTLKPRDKKV-DLALDDIQGVQALYGS 224
P D L+ DD + +Q+LYG+
Sbjct: 233 PNYGYFDPNTFSLSADDTRRIQSLYGA 259
>gi|355752583|gb|EHH56703.1| hypothetical protein EGM_06166 [Macaca fascicularis]
Length = 489
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|402895066|ref|XP_003910656.1| PREDICTED: collagenase 3 [Papio anubis]
Length = 471
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFVLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|326932338|ref|XP_003212276.1| PREDICTED: matrix metalloproteinase-23-like [Meleagris gallopavo]
Length = 400
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P + +K Y + PG +W H +T N+IN D + AF W+ V
Sbjct: 79 PPQPPARRKRYTITPGHLKWD-HFNLTYKILSFPRNLIN---ARDTRKGLAAAFQMWSEV 134
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E + +D++IGFY+ +H D FDG G LAH+F P +G+ H D
Sbjct: 135 SPFSFREVPRHAPSDLKIGFYSINHTDCLESLIHHCFDGTTGELAHAFFPPNGEIHFDDH 194
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + F +K DL VA HEIGH LGL HS A+M+ KK ++
Sbjct: 195 EYWILGNTRFSWKKGVWLTDLVHVAAHEIGHALGLMHSQNPNALMHINATLTGKKT-ISQ 253
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 254 DEVWGIHRLYGC 265
>gi|355566995|gb|EHH23374.1| hypothetical protein EGK_06829 [Macaca mulatta]
Length = 489
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|115668714|ref|XP_786545.2| PREDICTED: matrix metalloproteinase-14-like [Strongylocentrotus
purpuratus]
Length = 526
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
EN L + ++ + RA W+ ++F E D AD+ + F + DHGDG PFDG
Sbjct: 117 ENTTPDLRRSSVREIIARALKHWSDASQLTFREVQSGD-ADLLMKFTSRDHGDGNPFDGS 175
Query: 136 LGVLAHSFSPES-------GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLT 188
VLAH+F P S G H D AET+ ++ S +L VAVHE GH LGL
Sbjct: 176 GKVLAHAFFPTSERRYSIAGDAHFDEAETY-----TDNSYAGTNLFQVAVHEFGHSLGLG 230
Query: 189 HSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
HS +A+M + +L DDI G+QALYG+N
Sbjct: 231 HSNNPDAIMAAIYRGYVPNAELREDDIAGIQALYGAN 267
>gi|332208038|ref|XP_003253103.1| PREDICTED: collagenase 3 [Nomascus leucogenys]
Length = 471
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|130487232|ref|NP_001076240.1| macrophage metalloelastase precursor [Oryctolagus cuniculus]
gi|3023531|sp|P79227.1|MMP12_RABIT RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
Precursor
gi|1839256|gb|AAB46993.1| macrophage metalloelastase MMP-12 precursor [Oryctolagus cuniculus]
Length = 464
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG+P W +H + +N + D++ ++AF W+ V P+ F + A
Sbjct: 99 PGRPVWRKHY-----ITYRIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFRKITTGK-A 152
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F +G HGD FDG GV+AH+F P G H D E W+ KS +
Sbjct: 153 DIMILFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWS------KSYKGTN 206
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +A+M+PT D L+ DDI+G+Q+LYG
Sbjct: 207 LFLVAVHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLYGG 259
>gi|395814638|ref|XP_003780852.1| PREDICTED: collagenase 3 [Otolemur garnettii]
Length = 470
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +WT+ L+Y ++NY + ++++ FK+AF WA V P++F
Sbjct: 102 EYNVFPRTLKWTK---TNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWADVTPLNFT 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 154 RLHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 208 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFVLPEDDVQGIQSLYG 266
Query: 224 ---SNPN 227
+PN
Sbjct: 267 PGDEDPN 273
>gi|348567715|ref|XP_003469644.1| PREDICTED: matrix metalloproteinase-28-like isoform 3 [Cavia
porcellus]
Length = 494
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFS 144
++ + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F
Sbjct: 149 VRGAVRAAFQLWSNVSALEFWEAPATAPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFL 208
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P G+ H D E W++ + +L V HEIGH LGL HSP A+M P K
Sbjct: 209 PRRGEAHFDLDERWSLSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPRALMAPYYKRL 263
Query: 205 DKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
+ L+ DD+ VQ LYG ++G+ + + T+
Sbjct: 264 GRDALLSWDDVLAVQNLYGKPLGGSVGTQLPGKLFTDF 301
>gi|386811670|ref|ZP_10098895.1| metalloproteinase [planctomycete KSU-1]
gi|386403940|dbj|GAB61776.1| metalloproteinase [planctomycete KSU-1]
Length = 420
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 81/155 (52%), Gaps = 18/155 (11%)
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDF----ADIRIGFYNGDHGDGEPFDGVLGVLAHSF 143
+ V +AF W++V V E D DIRI + GDHGDG PFDG GVLAH++
Sbjct: 112 RGVIGQAFGLWSNVAEVKPTEVADGGANSCAGDIRIWWGAGDHGDGYPFDGPGGVLAHAW 171
Query: 144 SPE-------SGKFHLDAAETWAV-DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
P +G H D ETW +G +DL +VA HEIGH LGL HS A
Sbjct: 172 YPPPVNGGCIAGDVHFDEDETWVTPTYGG----AGIDLLTVAAHEIGHSLGLAHSSDPNA 227
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
+MYP R K L+ DDI G+ A+YGS P I
Sbjct: 228 LMYPFYTGR--KPYLSYDDIAGIYAIYGSRPEDVI 260
>gi|94536884|ref|NP_001035381.1| stromelysin-2 precursor [Danio rerio]
gi|92096319|gb|AAI15114.1| Zgc:136396 [Danio rerio]
Length = 475
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
F GKPRW + V ++Y ++ L ++ + +AF ++ VIPV F +
Sbjct: 101 FEGKPRWKQSV---VTYRITE--YTTQLSQREVDSTIAKAFQLYSDVIPVDFKQIFS-GT 154
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F GDHGD PFDG GVLAH+ SP + G H D E W++ S +
Sbjct: 155 ADIMILFKGGDHGDFYPFDGPNGVLAHANSPGPEQGGDTHFDDDEKWSL------SSHNI 208
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+MYPT + L DD GVQALYG
Sbjct: 209 NLLLVAAHEFGHALGLDHSRDSSALMYPTYRYVSTNAYTLPRDDRLGVQALYG 261
>gi|185132700|ref|NP_001116994.1| matrix metalloproteinase 13 precursor [Salmo salar]
gi|8247750|dbj|BAA96416.1| matrix metalloproteinase 13 [Salmo salar]
Length = 462
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP +W T F N L D+ + + W+SV P+ F +
Sbjct: 95 EYNHFPNDLKWK-----TTEVTFRILNYTPDLRKADVDRAVRNGLNVWSSVTPLKFKKLY 149
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ + ADI I F +HGD PFDG G+LAH++ P + G H D ETW DF
Sbjct: 150 EGN-ADIMISFGAREHGDFNPFDGPDGLLAHAYPPGNGIGGDTHFDEDETWTKDFHE--- 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE GH LG+ HS ++MYP K L+ DDI+G+Q+LYG NPN
Sbjct: 206 ---FNLFLVAAHEFGHALGMAHSSDPGSLMYPVYS-YGKGYPLSEDDIKGIQSLYGENPN 261
>gi|157837185|pdb|966C|A Chain A, Crystal Structure Of Fibroblast Collagenase-1 Complexed To
A Diphenyl-Ether Sulphone Based Hydroxamic Acid
Length = 157
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
EN L D+ ++AF W++V P++F + + ADI I F GDH D PFDG
Sbjct: 12 ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQ-ADIMISFVRGDHRDNSPFDGP 70
Query: 136 LGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPV 192
G LAH+F P G H D E W +F +L VA HE+GH LGL+HS
Sbjct: 71 GGNLAHAFQPGPGIGGDAHFDEDERWTNNF------REYNLHRVAAHELGHSLGLSHSTD 124
Query: 193 KEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
A+MYP+ V LA DDI G+QA+YG
Sbjct: 125 IGALMYPSYT-FSGDVQLAQDDIDGIQAIYG 154
>gi|260799306|ref|XP_002594638.1| hypothetical protein BRAFLDRAFT_264495 [Branchiostoma floridae]
gi|229279873|gb|EEN50649.1| hypothetical protein BRAFLDRAFT_264495 [Branchiostoma floridae]
Length = 498
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+++ + + L D+ RAF W P++F + ADI I F +HGD
Sbjct: 86 LTWSLADADYTPDLGKDDVDEAITRAFQLWQEQTPLTFTRVTNR--ADIVIKFAPIEHGD 143
Query: 129 GEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
G PFDG G LAH+F P+ G H D +E W V ++ +L VA HE GH LGL
Sbjct: 144 GAPFDGPGGTLAHAFFPQFGGDAHFDESEQWTV-----RTSSGTNLLQVAAHEFGHSLGL 198
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+HS + +A+M P + + + L DDI G+Q LYG
Sbjct: 199 SHSEISDALMAPFYRGYEPNLVLHSDDIAGIQMLYG 234
>gi|405972810|gb|EKC37558.1| Matrix metalloproteinase-19 [Crassostrea gigas]
Length = 509
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKF 150
RA W+ V P++F E +DI I F +HGDG FDG VLAH+F P +G
Sbjct: 138 RALRHWSDVTPLTFREVAGE--SDITISFETRNHGDGVSNSFDGRGRVLAHAFFPSNGDV 195
Query: 151 HLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDL 210
H D E W FG E D +VAVHE GH +GL HS V+ A+MYP + L
Sbjct: 196 HFDDDENWG--FGDEVGNTKTDFFTVAVHEFGHTMGLFHSDVQGALMYPYYSGYNASFTL 253
Query: 211 ALDDIQGVQALYG 223
DD++G+Q+LYG
Sbjct: 254 HDDDVKGMQSLYG 266
>gi|348567713|ref|XP_003469643.1| PREDICTED: matrix metalloproteinase-28-like isoform 2 [Cavia
porcellus]
Length = 508
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFS 144
++ + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F
Sbjct: 149 VRGAVRAAFQLWSNVSALEFWEAPATAPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFL 208
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P G+ H D E W++ + +L V HEIGH LGL HSP A+M P K
Sbjct: 209 PRRGEAHFDLDERWSLSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPRALMAPYYKRL 263
Query: 205 DKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
+ L+ DD+ VQ LYG ++G+ + + T+
Sbjct: 264 GRDALLSWDDVLAVQNLYGKPLGGSVGTQLPGKLFTDF 301
>gi|161761033|pdb|2POJ|A Chain A, Nmr Solution Structure Of The Inhibitor-Free State Of
Macrophage Metalloelastase (Mmp-12)
Length = 164
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 16/172 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 5 PGGPVWRKHY-----ITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 58
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 59 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 112
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
L AVH IGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 113 LFLTAVHAIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 164
>gi|199128|gb|AAA39526.1| metalloelastase [Mus musculus]
Length = 462
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 97 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 150
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH F P G H D AETW KS +
Sbjct: 151 DIMILFAFGAHGDFNYFDGKGGTLAHVFYPGPGIQGDAHFDEAETWT------KSFQGTN 204
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 205 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 257
>gi|348567711|ref|XP_003469642.1| PREDICTED: matrix metalloproteinase-28-like isoform 1 [Cavia
porcellus]
Length = 518
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFS 144
++ + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F
Sbjct: 149 VRGAVRAAFQLWSNVSALEFWEAPATAPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFL 208
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P G+ H D E W++ + +L V HEIGH LGL HSP A+M P K
Sbjct: 209 PRRGEAHFDLDERWSLSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPRALMAPYYKRL 263
Query: 205 DKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
+ L+ DD+ VQ LYG ++G+ + + T+
Sbjct: 264 GRDALLSWDDVLAVQNLYGKPLGGSVGTQLPGKLFTDF 301
>gi|194709131|pdb|3BA0|A Chain A, Crystal Structure Of Full-Length Human Mmp-12
Length = 365
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 99/193 (51%), Gaps = 24/193 (12%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 2 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 55
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 56 VVFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 109
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS--------NP 226
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG NP
Sbjct: 110 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRLPNP 169
Query: 227 NFTIGSLVESDIS 239
+ + +L + ++S
Sbjct: 170 DNSEPALCDPNLS 182
>gi|395845949|ref|XP_003795679.1| PREDICTED: matrix metalloproteinase-28 [Otolemur garnettii]
Length = 520
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFS 144
++ + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F
Sbjct: 151 VRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLSNAFDGPGGALAHAFL 210
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P G+ H D E W+ F + +L V HEIGH LGLTHSP A+M P K
Sbjct: 211 PRRGEAHFDQDERWS--FSRRR---GRNLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRL 265
Query: 205 DKKVDLALDDIQGVQALYG 223
+ L+ DD+ VQ+LYG
Sbjct: 266 GRDALLSWDDVLAVQSLYG 284
>gi|50731119|ref|XP_417175.1| PREDICTED: stromelysin-1 [Gallus gallus]
Length = 496
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 91/181 (50%), Gaps = 20/181 (11%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ Y FP P+W + ++Y ++NY + D+ +AF W+SV P+ F
Sbjct: 98 RSYSTFPRNPKWKKE---DVTY-----RILNYTPDMLQADVDEAIAKAFQLWSSVTPLRF 149
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFG 163
I D ADI I F +G HGD FDG G LAH++ P + G H D E W
Sbjct: 150 IRLYSGD-ADIMISFASGFHGDFYSFDGPGGTLAHAYPPNTGIGGDAHFDEDENWT---- 204
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
+ +L VA HE+GH LGL HS V A+MYP +D + L DDI G+QALY
Sbjct: 205 KFTTYSGYNLFLVAAHELGHSLGLGHSNVFGALMYPIYMAKDTRNYRLHQDDISGIQALY 264
Query: 223 G 223
G
Sbjct: 265 G 265
>gi|125838084|ref|XP_001345507.1| PREDICTED: collagenase 3 [Danio rerio]
Length = 461
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP +W T + F N L + ++A + W+ V P+ F +T
Sbjct: 94 EYNHFPRDLKWK-----TTNVTFRILNYTPDLKKKVVDRAVRKALNVWSKVTPLRFTKTF 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
D ADI I F +HGD PFDG G+LAH++ P G H D ETW D+
Sbjct: 149 D-GTADIMISFGTKEHGDFNPFDGPEGLLAHAYPPGIGIGGDTHFDEDETWTEDYH---- 203
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
A +L VA HE GH LG+ HS ++MYP K L+ DDI+G+Q+LYG NP+
Sbjct: 204 --AFNLFLVAAHEFGHALGMAHSSDPGSLMYPVYS-YAKGFPLSEDDIEGIQSLYGENPD 260
>gi|386799507|gb|AFJ38184.1| matrix metalloproteinase [Takifugu rubripes]
Length = 492
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F GKPRW + + ++Y ++ L + +AF ++ VIP+ F +
Sbjct: 101 YGHFQGKPRWRKGL---ITYRITR--YTPDLPQKQVDQTIAKAFQLYSDVIPLDFKQIYG 155
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKSP 168
+DI I F G HGD PFDG GVLAH+ SP + G H D ETW + S
Sbjct: 156 -TVSDIEILFQGGYHGDFYPFDGRGGVLAHANSPGQQQGGDTHFDDDETWTL------SQ 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGS 224
V+L VA HE GH LGL HS + A+M+PT + + L DD QGVQALYGS
Sbjct: 209 RGVNLLLVAAHEFGHALGLDHSRDRRALMFPTYQYVNTNGYKLPDDDRQGVQALYGS 265
>gi|332208036|ref|XP_003253102.1| PREDICTED: macrophage metalloelastase [Nomascus leucogenys]
Length = 470
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 101/195 (51%), Gaps = 24/195 (12%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G+P W +H ++Y + N ++ D+ ++AF W++V P+ F + AD
Sbjct: 105 GRPVWRKHY---ITYRIN--NYTPDMNREDVDNTIRKAFQVWSNVTPLKFSKIKT-GVAD 158
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDL 173
I + F G HGD FDG G+LAH+F P S G H D E W SE +L
Sbjct: 159 ILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDDDEFWTTH--SE----GTNL 212
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--------S 224
AVHEIGH LGL HS +A+M+PT K D L+ DDI+G+Q+LYG
Sbjct: 213 FLTAVHEIGHSLGLGHSSDPKAIMFPTYKYVDINTFRLSADDIRGIQSLYGYPKENQPLP 272
Query: 225 NPNFTIGSLVESDIS 239
NP+ + +L + ++S
Sbjct: 273 NPDNSEPALCDPNLS 287
>gi|403275309|ref|XP_003929396.1| PREDICTED: matrix metalloproteinase-28, partial [Saimiri
boliviensis boliviensis]
Length = 512
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 37 SDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
SD + ++ R +K G + +H LSY N L ++ + AF
Sbjct: 99 SDLFAGHQSQRRRKKRFAKQGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQ 152
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDA 154
W++V + F E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D
Sbjct: 153 LWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDR 212
Query: 155 AETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
E W + + +L V HEIGH LGL HSP A+M P K + L+ DD
Sbjct: 213 DERWTLSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPRALMAPYYKRLGRGALLSWDD 267
Query: 215 IQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
+ VQ+LYG +G V + L D
Sbjct: 268 VLAVQSLYGK----PLGGSVAVQLPGKLFTDF 295
>gi|449484659|ref|XP_002198049.2| PREDICTED: 72 kDa type IV collagenase-like [Taeniopygia guttata]
Length = 266
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y FPG P+W + L+Y ++NY L + KRA W+ V P+ F
Sbjct: 96 EYQTFPGTPKWKK---THLTY-----KIVNYTPDLPRRKVDDAIKRALKVWSDVTPLQFR 147
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWA-VDFG 163
ADI I F +HGDG PFDG G LAH+F P + G H D E W+ VD
Sbjct: 148 RIY-MGHADIEIRFARREHGDGAPFDGQGGTLAHAFEPGNGIGGDAHFDDDEKWSDVD-- 204
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALY 222
++L VA HE GH LGL HS V+ A+MYP + + + L DD +G+Q LY
Sbjct: 205 -----RDINLFLVAAHEFGHSLGLAHSNVRGALMYPLYRYENPETFRLPEDDRRGIQKLY 259
Query: 223 GSN 225
G
Sbjct: 260 GKK 262
>gi|403262923|ref|XP_003923814.1| PREDICTED: collagenase 3 [Saimiri boliviensis boliviensis]
Length = 471
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W+R M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSR---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTSKNHFMLPDDDVQGIQFLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|410909666|ref|XP_003968311.1| PREDICTED: uncharacterized protein LOC101068697 [Takifugu rubripes]
Length = 965
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y F GKPRW + + ++Y ++ L + +AF ++ VIP+ F +
Sbjct: 574 YGHFQGKPRWRKGL---ITYRITR--YTPDLPQKQVDQTIAKAFQLYSDVIPLDFKQIYG 628
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKSP 168
+DI I F G HGD PFDG GVLAH+ SP + G H D ETW + S
Sbjct: 629 -TVSDIEILFQGGYHGDFYPFDGRGGVLAHANSPGQQQGGDTHFDDDETWTL------SQ 681
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYGS 224
V+L VA HE GH LGL HS + A+M+PT + L DD QGVQALYGS
Sbjct: 682 RGVNLLLVAAHEFGHALGLDHSRDRRALMFPTYQYVNTNGYKLPDDDRQGVQALYGS 738
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
++Y + P+W H + F + + D+ F A W+ P++FI
Sbjct: 106 ENYSFYAKNPKWENH-----TITFMIDRYTTDMRREDVDKSFTSAMKMWSDAAPLNFIRV 160
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEK 166
++ ADI + F HGD PFDG GVLAH+F P G H D ETW GS
Sbjct: 161 Y-HNPADIVLSFARRTHGDFFPFDGPRGVLAHAFHPGKGIGGDVHFDEDETWTA--GSR- 216
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
L +VA HE+GH LGL+HS AVMYP+ + + + L+ DD G+Q LYG
Sbjct: 217 ---GYSLFAVAAHELGHSLGLSHSKDPSAVMYPSYRSHSRTQSSLSRDDTLGIQKLYG 271
>gi|431916542|gb|ELK16520.1| Stromelysin-1 [Pteropus alecto]
Length = 358
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 92 DFSTFPGMPKWRK---TRLTY-----RIVNYTLDLPRDAVDSAIEKALKVWEEVTPLTFS 143
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ + ADI I F +HGD PFDG VLAH+FSP +G H D E W D
Sbjct: 144 RIYEGE-ADILITFAAREHGDFIPFDGPGMVLAHAFSPGPGINGDAHFDDDEKWTKDTS- 201
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS EA+MYP P + L+ DD+ G+Q+LY
Sbjct: 202 -----GTNLFLVAAHELGHSLGLYHSANSEALMYPVYNPFTDLARFRLSQDDVNGIQSLY 256
Query: 223 GSNP 226
G P
Sbjct: 257 GPPP 260
>gi|410971811|ref|XP_003992356.1| PREDICTED: stromelysin-1 [Felis catus]
Length = 478
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + F++A W V P++F +
Sbjct: 100 FTTFPGLPKWRK---THLTY-----RIVNYTLDLPREAVDSAFEKALKAWEEVTPLTFSK 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F DHGD PFDG +L H+++P +G H D E W D
Sbjct: 152 IYEGE-ADIMIFFAVRDHGDFIPFDGPGNILGHAYAPGPGINGDAHFDDDEQWTKDTS-- 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS A+MYP PR + LA DD+ G+Q+LYG
Sbjct: 209 ----GTNLFLVAAHELGHSLGLYHSADPTALMYPVYNPRTDLTRFRLAQDDVNGIQSLYG 264
Query: 224 SNP 226
P
Sbjct: 265 PPP 267
>gi|242013009|ref|XP_002427215.1| Matrix metalloproteinase, putative [Pediculus humanus corporis]
gi|212511510|gb|EEB14477.1| Matrix metalloproteinase, putative [Pediculus humanus corporis]
Length = 542
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 23 CIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
+ + TP+ +K DK + K Y L RW H L+Y SK L
Sbjct: 80 TLELMETPRCGVK--DKVGGVTSNSRSKRYAL--QGSRWKVH---NLTYKISK--YPRAL 130
Query: 83 HITDIKAVFKRAFSKWASVIPVSF-IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
+++ +V +RAF W+ ++F ++ D+R F G+HGDG+PFDG G LAH
Sbjct: 131 KKSEVDSVVERAFKVWSDYTDLTFTLKKSGSVHIDVR--FERGEHGDGDPFDGRGGTLAH 188
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D E W V KS +L VA HE GH LGL+HS ++ A+M P
Sbjct: 189 AYFPIYGGDAHFDDDERWTV-----KSYSGTNLFQVAAHEFGHSLGLSHSDIRSALMAPY 243
Query: 201 LKPRDKKVDLALDDIQGVQALYG 223
+ +L DDI+G+Q LYG
Sbjct: 244 YRGYQPYFELDSDDIRGIQILYG 266
>gi|390344931|ref|XP_003726232.1| PREDICTED: matrix metalloproteinase-9-like [Strongylocentrotus
purpuratus]
Length = 524
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMI-------NYLHITDIKAVFKRAFSKWASVIP 103
D+ + P PR RH + + K ++ L + + RAF W+ V
Sbjct: 109 DHDMSPSDPRGMRHKRWAIFQRWPKNDLTYRISTYTTKLPVDIVDDAVSRAFKLWSDVAN 168
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE--------SGKFHLDAA 155
++F + ADI I F+ GDHGD PFDG VL H+F P G HLD
Sbjct: 169 ITFTKITSGK-ADIDISFHRGDHGDSRPFDGSGLVLGHAFPPGLITSRPDLIGSIHLDEE 227
Query: 156 ETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDI 215
E W + S K +L HEIGH +GL+HS V A+MYP + L DDI
Sbjct: 228 ENWTANSRSGK-----NLWLTVGHEIGHAIGLSHSRVLPALMYPWYPSYNPSFTLDRDDI 282
Query: 216 QGVQALYGSNP 226
+GVQ LYG+ P
Sbjct: 283 EGVQFLYGARP 293
>gi|345480289|ref|XP_003424120.1| PREDICTED: matrix metalloproteinase-24-like isoform 2 [Nasonia
vitripennis]
gi|345480291|ref|XP_001607648.2| PREDICTED: matrix metalloproteinase-24-like isoform 1 [Nasonia
vitripennis]
Length = 672
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 17 IHESPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKE 76
+ E Q + VR K + R K Y L G P W +H+ +T S +
Sbjct: 93 VDERTQQLMVRRRCGLPDKPDLRLQDPSLLRRFKRYTLH-GSP-W-KHLNLTWSLRTERP 149
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
+ L ++ RA WA ++F E + D ADI I F+ G HGDG PFDG
Sbjct: 150 SG---LETGGVRRELARALDVWAKNSKLTFHEINS-DAADILISFHRGYHGDGYPFDGRG 205
Query: 137 GVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
+LAH+F P S G H D E W +D S + L +VA HE GH LGL HS V+
Sbjct: 206 QILAHAFFPGSDRGGDAHFDEEEEWTLD--SSGNDDGTSLFAVAAHEFGHSLGLAHSSVR 263
Query: 194 EAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
A+MYP + + +L DD G+Q +YG+
Sbjct: 264 GALMYPWYQGITEDYELPEDDKHGIQQMYGA 294
>gi|296434219|ref|NP_001171780.1| matrix metallopeptidase 19-like precursor [Saccoglossus
kowalevskii]
Length = 505
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+W R L+Y F N L I + K ++AF+ W+ V P+SF E D DI +
Sbjct: 118 KWDR---TNLTYKFV--NFTPDLAIVEQKKTIEQAFAAWSDVTPLSFTEVFD-GRPDILL 171
Query: 120 GFYNGDHGDGE--PFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVA 177
F +G H DG+ FDG GVLAH++ P+ G H D E + V ++ V+L A
Sbjct: 172 EFSSGVHSDGKNAAFDGPGGVLAHAYYPQFGDAHFDDDEYFTV-----RTSDGVNLLFTA 226
Query: 178 VHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
HE GH LGL HS V +A+MYP + + L DDI+G+QA+YG
Sbjct: 227 AHEFGHSLGLAHSSVSDALMYPFYQGYNPDFALTEDDIRGIQAIYG 272
>gi|148222573|ref|NP_001079874.1| uncharacterized protein LOC379564 precursor [Xenopus laevis]
gi|33585866|gb|AAH56080.1| MGC69070 protein [Xenopus laevis]
Length = 258
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG+PRW + LSY ++NY L + + AF W+ V P+ F
Sbjct: 92 EFRQFPGRPRWAK---TQLSY-----RIVNYTPDLPRPVVDEAIRMAFKVWSDVTPLKFT 143
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
ADI I F HGDG PFDG GVLAH+++P + G H D E W
Sbjct: 144 RVSSRR-ADILIQFGARSHGDGIPFDGPNGVLAHAYAPGNGIGGDAHFDEDERWT----- 197
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P + + L DD+ G+Q++YG
Sbjct: 198 -SSSAGFNLFLVAAHEFGHSLGLDHSRDARALMFPNYRYVNTRNFRLPQDDVNGIQSIYG 256
>gi|198430583|ref|XP_002121453.1| PREDICTED: similar to matrix metalloproteinase 14
(membrane-inserted) alpha [Ciona intestinalis]
Length = 685
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 44 EATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
E+ KK YV G P W +++ +S N L AF W S +P
Sbjct: 164 ESNLRKKRYVTV-GSP-WQKNL-----ITYSINNFTPKLGQKLTHEAIDDAFRVWGSFVP 216
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAV 160
+ F + D DI F G H D FDGV G LAH+F P S G H D AE W +
Sbjct: 217 LQFKKVDASQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWTL 276
Query: 161 DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQ 219
G + DL VAVHE+GH LGL HSP +A+M P K D + L DDI G+Q
Sbjct: 277 HQGPNR---GNDLFLVAVHELGHALGLQHSPDVKAIMAPVYKYHDTENFQLPQDDILGIQ 333
Query: 220 ALYGS 224
+LYG+
Sbjct: 334 SLYGA 338
>gi|148227776|ref|NP_001080518.1| matrix metalloproteinase 1 precursor [Xenopus laevis]
gi|32450369|gb|AAH54233.1| Mmp1-prov protein [Xenopus laevis]
Length = 466
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ +FPG P W + L+Y +N + ++ ++AF W+ V P++F +
Sbjct: 98 NFRVFPGNPVWNKK---DLTYRI--QNYTPDMTRDEVDRAIQKAFKVWSDVTPLTFTRVN 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKS 167
D ADI I F DH D PFDG G LAH+F+P G H D E W
Sbjct: 153 D-GVADIEISFAARDHKDFYPFDGPYGTLAHAFAPGNNNGGDAHFDEDEDWT------SG 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
V +L VA HE GH LGL HS A+MYP + L DD+ G+Q+LYG+
Sbjct: 206 SVGFNLFLVAAHEFGHSLGLYHSNDPNALMYPNYHYVNPNTYQLPQDDLNGIQSLYGA 263
>gi|189067481|dbj|BAG37740.1| unnamed protein product [Homo sapiens]
Length = 471
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSGVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|6754714|ref|NP_034939.1| stromelysin-1 preproprotein [Mus musculus]
gi|54872|emb|CAA44860.1| transin-1 [Mus musculus]
gi|13879491|gb|AAH06725.1| Matrix metallopeptidase 3 [Mus musculus]
gi|28300433|gb|AAO37583.1| matrix metalloproteinase 3 [Mus musculus]
gi|148692988|gb|EDL24935.1| mCG9886 [Mus musculus]
Length = 479
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 23/181 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + ++Y ++NY L + + ++A W V P++F
Sbjct: 102 FSTFPGSPKWRKS---HITY-----RIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSR 153
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG VLAH+++P +G H D E W D
Sbjct: 154 ISEGE-ADIMISFAVGEHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWTEDV--- 209
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 210 ---TGTNLFLVAAHELGHSLGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYG 266
Query: 224 S 224
+
Sbjct: 267 T 267
>gi|461769|sp|P28862.2|MMP3_MOUSE RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=EMS-2;
AltName: Full=Matrix metalloproteinase-3; Short=MMP-3;
AltName: Full=Transin-1; Flags: Precursor
gi|296168|emb|CAA47029.1| stromelysin-i [Mus musculus]
Length = 477
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 23/181 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + ++Y ++NY L + + ++A W V P++F
Sbjct: 100 FSTFPGSPKWRKS---HITY-----RIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG VLAH+++P +G H D E W D
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWTEDV--- 207
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 208 ---TGTNLFLVAAHELGHSLGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYG 264
Query: 224 S 224
+
Sbjct: 265 T 265
>gi|357015189|ref|ZP_09080188.1| peptidase, partial [Paenibacillus elgii B69]
Length = 298
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 19/158 (12%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFD--- 133
N + L +I+ ++AF+ W+ V P++F E ADI I F GDHGDG+PFD
Sbjct: 131 NFTSDLTEAEIRDAIRQAFNLWSEVTPLTFTEVTSN--ADILIRFATGDHGDGDPFDGAG 188
Query: 134 -GVLGVLAHSFSPE------SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLG 186
G VLAH++ P +G H D AETW V+ S VDL +VA HE GH LG
Sbjct: 189 NGAGNVLAHAYYPPPNRGDLAGDAHFDDAETWTVNASS-----GVDLVTVAAHEFGHSLG 243
Query: 187 LTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
L HS V ++M+ + + L+ DDI G+Q +YG
Sbjct: 244 LEHSNVPGSLMFASYSGVHRF--LSQDDIDGIQRIYGG 279
>gi|395815729|ref|XP_003781376.1| PREDICTED: matrilysin [Otolemur garnettii]
Length = 298
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP K +WT + +++++ L + ++A W IP+ F
Sbjct: 94 EYSLFPKKSKWTSKIVTYRVVSYTRD-----LPSIIVDRFVEKALKMWGRHIPLLFKRVR 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F P G H D ETW ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDYYPFDGPGNTLAHAFEPGPGLGGDAHFDDDETW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE GH LGL HS +AVMYP RD L+ DDI+G+Q +Y P
Sbjct: 203 RIGINFLVTATHEFGHSLGLGHSSDPKAVMYPVYGSRDVNNFKLSQDDIEGIQKIYALLP 262
Query: 227 N 227
+
Sbjct: 263 D 263
>gi|356532736|ref|XP_003534927.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
Length = 349
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 6/197 (3%)
Query: 50 KDYVLFPGKPRWTRHVP-MTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
KD V +P R P L+Y FS + I ++ VF+ AF++WA +P +
Sbjct: 147 KDNVSWPMSRYHRRWFPDRNLTYGFSPASKI----PSNATKVFRDAFARWAGSVPGLNLT 202
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSP 168
+Y+ AD+++GFYN D G + G + ++ + SG+ LDA + W + ++
Sbjct: 203 EMNYNSADLKVGFYNLDEGVEDVVWGESIIRLNASNVVSGEIRLDATKDWKLPGEKGENG 262
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGSNPN 227
A+DLES A+H IGHLLGL HS +E+VMYP + P R +KV L+ D + ++ +Y +
Sbjct: 263 TALDLESAAMHHIGHLLGLDHSNDEESVMYPYVLPSRRQKVKLSSSDKENIRLVYSKGHS 322
Query: 228 FTIGSLVESDISTNLAV 244
GS I T LA+
Sbjct: 323 GNGGSWGVVRIVTTLAL 339
>gi|397516406|ref|XP_003828421.1| PREDICTED: collagenase 3 [Pan paniscus]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|114640119|ref|XP_001154361.1| PREDICTED: collagenase 3 isoform 2 [Pan troglodytes]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|334265704|ref|YP_004376233.1| metalloproteinase [Clostera anachoreta granulovirus]
gi|327553719|gb|AEB00313.1| metalloproteinase [Clostera anachoreta granulovirus]
Length = 412
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG 127
++Y+ + + +L++ + KRAF W + + F + A+I+I F G HG
Sbjct: 43 NITYSLHRHTVPKHLNVDSLTTDTKRAFHVWQNRTTLKFYDAGPDVIANIQIEFVQGAHG 102
Query: 128 DGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
D FDG GVLAH+F P G HLDA E W V G + +HEIGH LGL
Sbjct: 103 DLYDFDGPGGVLAHAFLPPKGLIHLDADEVW-VTGGDVSNGRGTSYLHTLIHEIGHALGL 161
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
HS +++M+P R + DL +DD+ G+ LY NP T
Sbjct: 162 YHSSDPKSIMFPVY--RGDRFDLGVDDLNGLDQLYDHNPKRT 201
>gi|158257854|dbj|BAF84900.1| unnamed protein product [Homo sapiens]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|119587438|gb|EAW67034.1| matrix metallopeptidase 13 (collagenase 3), isoform CRA_a [Homo
sapiens]
Length = 489
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|32306837|gb|AAP78939.1| collagenase-3 splice variant COL3-9B-2 [Homo sapiens]
Length = 489
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|32306839|gb|AAP78940.1| collagenase-3 deletion variant COL3-DEL [Homo sapiens]
Length = 383
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|431916544|gb|ELK16522.1| Collagenase 3 [Pteropus alecto]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPVYTYTGKSHFMLPDDDVQGIQSLYG 267
>gi|4505209|ref|NP_002418.1| collagenase 3 preproprotein [Homo sapiens]
gi|1168998|sp|P45452.1|MMP13_HUMAN RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|516386|emb|CAA53056.1| collagenase 3 [Homo sapiens]
gi|1495425|emb|CAA57108.1| collagenase-3 [Homo sapiens]
gi|45768659|gb|AAH67522.1| Matrix metalloproteinase 13, preproprotein [Homo sapiens]
gi|49902384|gb|AAH74807.1| Matrix metalloproteinase 13, preproprotein [Homo sapiens]
gi|49904782|gb|AAH74808.1| Matrix metallopeptidase 13 (collagenase 3) [Homo sapiens]
gi|51895762|gb|AAU13907.1| matrix metalloproteinase 13 (collagenase 3) [Homo sapiens]
gi|119587439|gb|EAW67035.1| matrix metallopeptidase 13 (collagenase 3), isoform CRA_b [Homo
sapiens]
gi|313882556|gb|ADR82764.1| matrix metallopeptidase 13 (collagenase 3) (MMP13) [synthetic
construct]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|45768662|gb|AAH67523.1| Matrix metallopeptidase 13 (collagenase 3) [Homo sapiens]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|60819972|gb|AAX36519.1| matrix metalloproteinase 13 [synthetic construct]
Length = 471
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|351702188|gb|EHB05107.1| Matrix metalloproteinase-28 [Heterocephalus glaber]
Length = 525
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N L +++ AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 146 NWPERLPEPEVRGAVHAAFQLWSNVSALEFWEAPATVPADIRLTFFQGDHNDGLSNAFDG 205
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGL HSP
Sbjct: 206 PGGALAHAFLPRRGEAHFDLDERWSLSHRRGR-----NLFVVLAHEIGHTLGLAHSPAPR 260
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
A+M P K + L+ DD+ VQ LYG ++G+ + + T+
Sbjct: 261 ALMAPYYKRLGRDALLSWDDVLAVQNLYGKPLGGSVGTQLPGKLFTDF 308
>gi|426370264|ref|XP_004052088.1| PREDICTED: collagenase 3 [Gorilla gorilla gorilla]
Length = 471
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|281341728|gb|EFB17312.1| hypothetical protein PANDA_010999 [Ailuropoda melanoleuca]
Length = 224
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 25 AVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHI 84
V + P K+ Q P +Y LFP +P+W V +++ + L
Sbjct: 37 GVLNPPTIKIMQK----PRCGVPDVAEYSLFPAQPKWVSSVVTYRIVSYTPD-----LPR 87
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
+ + +A + W+ IP+SF ADI I F G HGD PFDG LAH+F+
Sbjct: 88 VRVNQLVAKALAMWSQEIPLSFRRVL-AGTADIMISFARGAHGDYNPFDGPGNTLAHAFA 146
Query: 145 PE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
P G H D E W ++ S V+ A HE+GH LGL HS AVMYP
Sbjct: 147 PGPGLGGDAHFDEDEHW-----TDGSRTGVNFLITATHELGHSLGLGHSSDPNAVMYPAY 201
Query: 202 KPRD-KKVDLALDDIQGVQALYG 223
+ D K LA DDI+G++ LYG
Sbjct: 202 RVGDPKNFKLAPDDIKGIRKLYG 224
>gi|383858249|ref|XP_003704614.1| PREDICTED: 72 kDa type IV collagenase-like [Megachile rotundata]
Length = 564
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP- 145
+ A +AF W+ + FI+ I I F G+HGDG+PFDG G LAH++ P
Sbjct: 143 VDAELSKAFKVWSDYTDLVFIQKKSGQ-VHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPV 201
Query: 146 ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
G H D AE W +D S +L VA HE GH LGL+HS +K A+M P + +
Sbjct: 202 YGGDAHFDDAEQWTID-----SFRGTNLFQVAAHEFGHSLGLSHSDIKSALMAPFYRGYE 256
Query: 206 KKVDLALDDIQGVQALYGSNPNFTIG 231
L DDIQG+QALYG T G
Sbjct: 257 PYFRLDDDDIQGIQALYGKKSVSTSG 282
>gi|311263815|ref|XP_003129856.1| PREDICTED: collagenase 3 [Sus scrofa]
Length = 470
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 102 EYNVFPRTLKWSQ---MNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 154 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 208 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 266
>gi|74222651|dbj|BAE42198.1| unnamed protein product [Mus musculus]
Length = 473
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G +GD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGANGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>gi|126327112|ref|XP_001362711.1| PREDICTED: stromelysin-1 [Monodelphis domestica]
Length = 478
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 91/180 (50%), Gaps = 23/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FP P+W + ++Y ++NY ++ D+ A +RA W+ V P++F
Sbjct: 99 FSFFPYMPKWRNN---EVTY-----RIVNYTPDMNEPDVDAAIERALKVWSDVTPLTFTR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F DHGD PFDG GVLAH++ P +G HLD E W D
Sbjct: 151 LSEGE-ADIMISFSVKDHGDFLPFDGPGGVLAHAYPPGPKINGDVHLDDDEKWTED---- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK--KVDLALDDIQGVQALYG 223
++L A HE GH LGL HS A+MYP + L+ DDI G+Q+LYG
Sbjct: 206 --TTGINLFLTAAHEFGHSLGLLHSSDTAALMYPVYNSNTDLTRFRLSQDDIDGIQSLYG 263
>gi|537929|gb|AAA99983.1| matrilysin [Mus musculus]
gi|1098307|prf||2115376A matrilysin
Length = 264
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 86/178 (48%), Gaps = 17/178 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y L P P+W + +++ + L + + K+A W+ IP++F
Sbjct: 94 EYSLMPNSPKWHSRIVTYRIVSYTSD-----LPRIVVDQIVKKALRMWSMQIPLNFKRVS 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF DHGD PFDG L H+F+P G H D E W D
Sbjct: 149 -WGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYWTDD-----E 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
V+ A HE GH LGL+HS V VMYPT + RD D +L DDI G+Q LYG
Sbjct: 203 DAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQ-RDYSEDFSLTKDDIAGIQKLYG 259
>gi|395748852|ref|XP_002827314.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28 [Pongo
abelii]
Length = 521
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 89 AVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPE 146
A + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F P
Sbjct: 154 AEVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDGPGGALAHAFLPR 213
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK 206
G+ H D E W++ + +L V HEIGH LGLTHSP A+M P K +
Sbjct: 214 RGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGR 268
Query: 207 KVDLALDDIQGVQALYG 223
L+ DD+ VQ+LYG
Sbjct: 269 DALLSWDDVLAVQSLYG 285
>gi|395815731|ref|XP_003781377.1| PREDICTED: macrophage metalloelastase [Otolemur garnettii]
Length = 473
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG+ W + S + N + D+ ++AF W++V P+ F + + + A
Sbjct: 103 PGRRAWNKR-----SITYRINNYTPDMRHEDVDYAIEKAFQAWSNVTPLKFRKINMGE-A 156
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F HGD + FDG GV+AH+F P G H D E W ++ +
Sbjct: 157 DIMIRFARRAHGDYDAFDGSGGVIAHAFGPAPGLGGDAHFDEDEFWTKNY------RGTN 210
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS------- 224
L VAVHE GH LGL HS K A+M+PT D + L+ DDI+G+Q+LYG
Sbjct: 211 LFLVAVHEFGHSLGLGHSNDKNAIMFPTYSYVDPNRFRLSDDDIRGIQSLYGGPERQPMP 270
Query: 225 NPNFTIGSLVESDIS 239
NP+ + + D+S
Sbjct: 271 NPDRPKSDMCDPDLS 285
>gi|432953088|ref|XP_004085285.1| PREDICTED: collagenase 3-like [Oryzias latipes]
Length = 497
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 97/183 (53%), Gaps = 23/183 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+ F +W ++ TL+Y ++NY + +++ +RA WASV P+ F
Sbjct: 127 QFSTFGNNVKWQKN---TLTY-----RIVNYTPDMSQAEVQDSIQRALQVWASVTPLRFT 178
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
T+ ADI + F G HGD PFDG G LAH+FSP S G H D ET+ F S
Sbjct: 179 RTNSGP-ADIMVSFGRGAHGDYYPFDGPHGTLAHAFSPSSGIGGDVHFDDDETFT--FRS 235
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP--TLKPRDKKVDLALDDIQGVQALY 222
K V L VA HE GH LGL+HS + A+MYP + D V L DD++G+Q+LY
Sbjct: 236 SKGYV---LFMVAAHEFGHSLGLSHSSDRGALMYPLYSFGYPDTFV-LPKDDVRGIQSLY 291
Query: 223 GSN 225
G N
Sbjct: 292 GPN 294
>gi|348507693|ref|XP_003441390.1| PREDICTED: matrix metalloproteinase-19-like [Oreochromis niloticus]
Length = 471
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
+D++ + AF W+ V ++F E + Y ADI+I F+ D PFDG VLAH+ S
Sbjct: 130 SDVRNAIRSAFKYWSDVAALTFREVN-YGRADIKISFHKKDGFCSVPFDGRGRVLAHAES 188
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
PESG H D E W +E + +L VA HEIGH LGL HS + A+M P
Sbjct: 189 PESGIVHFDEDEFW-----TEGTYYGTNLRIVAAHEIGHALGLGHSQFRSALMAPVYSGY 243
Query: 205 DKKVDLALDDIQGVQALYGSN 225
L DD+ G+QALYG +
Sbjct: 244 RVNFRLHSDDVNGIQALYGES 264
>gi|111955033|ref|NP_034940.2| matrilysin precursor [Mus musculus]
gi|74190529|dbj|BAE25921.1| unnamed protein product [Mus musculus]
gi|111306729|gb|AAI20656.1| Matrix metallopeptidase 7 [Mus musculus]
gi|111599927|gb|AAI19058.1| Matrix metallopeptidase 7 [Mus musculus]
Length = 267
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y L P P+W + +++ + L + + K+A W+ IP++F
Sbjct: 97 EYSLMPNSPKWHSRIVTYRIVSYTSD-----LPRIVVDQIVKKALRMWSMQIPLNFKRVS 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF DHGD PFDG L H+F+P G H D E W ++
Sbjct: 152 -WGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYW-----TDGE 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
V+ A HE GH LGL+HS V VMYPT + RD D +L DDI G+Q LYG
Sbjct: 206 DAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQ-RDYSEDFSLTKDDIAGIQKLYG 262
>gi|260793187|ref|XP_002591594.1| hypothetical protein BRAFLDRAFT_252628 [Branchiostoma floridae]
gi|229276802|gb|EEN47605.1| hypothetical protein BRAFLDRAFT_252628 [Branchiostoma floridae]
Length = 171
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEP 131
F N Y+ +++ V R+ W V P++F E + D ADI F+ GDH DG P
Sbjct: 9 TFRIVNRPRYISEKELRRVILRSLKLWTDVTPLTFREVVNGD-ADIMFEFHRGDHNDGHP 67
Query: 132 FDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
FDG+ G+ AH+F PE+G H DA E W D S + DL + HEIGH LGL HS
Sbjct: 68 FDGLGGIFAHAFFPENGDVHYDADEPWTTD--SRYTSSKKDLFLITAHEIGHSLGLGHSQ 125
Query: 192 VKEAVMYPTLKPRDKKVDLAL---DDIQGVQALYG-SNPNFTIGSL 233
+ A+M + + + DL DD G A+YG S +GSL
Sbjct: 126 LFGALMRRSYQDIAQNGDLYRLPSDDEMGALAVYGVSMSPVILGSL 171
>gi|307194255|gb|EFN76651.1| Matrix metalloproteinase-14 [Harpegnathos saltator]
Length = 547
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + +TP+ +K DK PA R K+ Y L + +R L+Y +K +
Sbjct: 50 ETARLMATPRCGVK--DKVGPAADGRSKR-YAL-----QGSRWRTKNLTYQITK--YPSG 99
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDD-YDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
L+ + + AF+ W+ ++F + ++ I I F G+HGDG+PFDG G LA
Sbjct: 100 LNNDAVDKEIRTAFNVWSEYTDLTFTQKKGLHNNVHIEIRFEVGEHGDGDPFDGPGGTLA 159
Query: 141 HSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
H++ P G H D +E W + +S +L VA HE GH LGL+HS +K A+M P
Sbjct: 160 HAYFPVYGGDAHFDDSERWTI-----RSYRGTNLFQVAAHEFGHSLGLSHSDIKSALMAP 214
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ D L DD+ +QALYG N
Sbjct: 215 FYRGYDPHFTLDRDDVDAIQALYGKKTN 242
>gi|260820866|ref|XP_002605755.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
gi|229291090|gb|EEN61765.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
Length = 488
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG---K 149
RAF WA V P++F ADI I F G HGDG FD GVLAH++ P G
Sbjct: 116 RAFDVWAQVTPLTFRRVSGP--ADIEIRFAAGSHGDGNSFDSRGGVLAHAYQPGGGIGGD 173
Query: 150 FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD 209
H D +E W + + S DL SVA HE GH LGL HS V A+M P + + +
Sbjct: 174 AHFDESEIWQIGGPNIASLSGTDLFSVAAHEFGHSLGLGHSQVNSALMAPFYR-YQRSLR 232
Query: 210 LALDDIQGVQALYGS 224
L DDI G+Q+LYG
Sbjct: 233 LDRDDISGIQSLYGG 247
>gi|21654707|gb|AAK64605.1| stromelysin-1 [Felis catus]
Length = 393
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 93/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + F++A W V P++F +
Sbjct: 36 FTTFPGLPKWRK---THLTY-----RIVNYTPDLPREAVDSAFEKALKAWEEVTPLTFSK 87
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + AD+ I F DHGD PFDG +L H+++P +G H D E W
Sbjct: 88 IYEGE-ADVMIFFAVRDHGDFIPFDGPGNILGHAYAPGPGINGDAHFDDDEQWT------ 140
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS A+MYP PR + LA DD+ G+Q+LYG
Sbjct: 141 KDTSGTNLFLVAAHELGHSLGLYHSADPTALMYPVYNPRTDLTRFRLAQDDVNGIQSLYG 200
Query: 224 SNP 226
P
Sbjct: 201 PPP 203
>gi|442748413|gb|JAA66366.1| Putative macrophage metalloelast [Ixodes ricinus]
Length = 353
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 24/188 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ G+P W ++ ++Y + N + D+ ++AF W++V + F +
Sbjct: 99 FTTMQGRPVWKKYF---ITYRIN--NYTPDMKREDVDYTIQKAFQVWSNVTTLKFKRVNT 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F G HGD PFDG GV AH++ P G H D AE W ++
Sbjct: 154 GE-ADIMIHFVLGAHGDFSPFDGRGGVAAHAYGPGPGIGGDAHFDEAEFWTKNY------ 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS--- 224
+L VAVHE GH LGL HS ++A+M+PTL D L+ DDI+G+Q+LYG
Sbjct: 207 RGTNLFLVAVHEFGHSLGLGHSNDRKAIMFPTLSYVDLNSFPLSPDDIRGIQSLYGGPEK 266
Query: 225 -----NPN 227
NPN
Sbjct: 267 DKPSLNPN 274
>gi|71896449|ref|NP_001025502.1| stromelysin-1 precursor [Xenopus (Silurana) tropicalis]
gi|89267895|emb|CAJ83343.1| matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Xenopus
(Silurana) tropicalis]
Length = 497
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 30/186 (16%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
F G P+W + T++Y ++NY + +++ +AF W+ V P++F + +
Sbjct: 123 FAGNPKWGK---TTVTY-----RILNYTPDITKSEVDYAIAQAFRVWSDVTPLNFQKLNS 174
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
D ADI I F HGD + FDG GVLAH+++P G H D E W + P
Sbjct: 175 GD-ADIMISFNTRAHGDFDSFDGPNGVLAHAYAPSDGIGGDAHFDEDEQWTL------GP 227
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYP------TLKPRDKKVDLALDDIQGVQALY 222
+L VA HE GH LG++HS A+MYP T+ P K L+ DDI G+Q LY
Sbjct: 228 TGANLFHVAAHEFGHSLGMSHSTDTNALMYPTVSFGVTIDPAQYK--LSADDIAGIQTLY 285
Query: 223 G-SNPN 227
G NP+
Sbjct: 286 GKGNPS 291
>gi|27805999|ref|NP_776814.1| collagenase 3 precursor [Bos taurus]
gi|8469207|sp|O77656.1|MMP13_BOVIN RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|3264824|gb|AAC24596.1| matrix metalloproteinase 13 [Bos taurus]
Length = 471
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
>gi|296480370|tpg|DAA22485.1| TPA: collagenase 3 precursor [Bos taurus]
Length = 471
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
>gi|34810827|pdb|1OS2|A Chain A, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810828|pdb|1OS2|B Chain B, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810829|pdb|1OS2|C Chain C, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810830|pdb|1OS2|D Chain D, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810831|pdb|1OS2|E Chain E, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810832|pdb|1OS2|F Chain F, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
gi|34810833|pdb|1OS9|A Chain A, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810834|pdb|1OS9|B Chain B, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810835|pdb|1OS9|C Chain C, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810836|pdb|1OS9|D Chain D, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810837|pdb|1OS9|E Chain E, Binary Enzyme-Product Complexes Of Human Mmp12
gi|34810838|pdb|1OS9|F Chain F, Binary Enzyme-Product Complexes Of Human Mmp12
Length = 165
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 4 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 57
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 58 VVFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 111
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 112 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 160
>gi|440912885|gb|ELR62410.1| Collagenase 3 [Bos grunniens mutus]
Length = 469
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
>gi|327269110|ref|XP_003219338.1| PREDICTED: collagenase 3-like [Anolis carolinensis]
Length = 473
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 17 IHESPQCIAVRSTPKF--KLKQ--------------SDKYD----PAEATRHKKDYVLFP 56
+H SP + +S F KL++ D YD P +Y FP
Sbjct: 50 LHSSPAGLLRKSASTFASKLQEMQAFFGLEITGKLDEDTYDLMKQPRCGVPDVGEYNFFP 109
Query: 57 GKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYD 113
K +W+ + L+Y ++NY L +++ F++AF W+ V P++F
Sbjct: 110 RKLKWSHN---NLTY-----RIVNYTPDLKKSEVDRAFRKAFKVWSDVTPLNFTRIRS-G 160
Query: 114 FADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKSPVA 170
ADI I F +HGD PFDG G+LAH+F P G H D E W+ D
Sbjct: 161 IADIMISFGRKEHGDFYPFDGPSGLLAHAFPPGPNTGGDAHFDEDELWSTD------SNG 214
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS A+MYP + L DD+QG+Q LYG
Sbjct: 215 YNLFIVAAHELGHSLGLEHSTDPGALMYPVYTYTGNTGFLLPDDDVQGIQTLYG 268
>gi|308198518|pdb|3KRY|A Chain A, Crystal Structure Of Mmp-13 In Complex With Sc-78080
gi|308198519|pdb|3KRY|B Chain B, Crystal Structure Of Mmp-13 In Complex With Sc-78080
gi|308198520|pdb|3KRY|C Chain C, Crystal Structure Of Mmp-13 In Complex With Sc-78080
gi|308198521|pdb|3KRY|D Chain D, Crystal Structure Of Mmp-13 In Complex With Sc-78080
Length = 164
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|340719858|ref|XP_003398362.1| PREDICTED: matrix metalloproteinase-14-like [Bombus terrestris]
Length = 589
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP-ESGKF 150
+AF W+ + FI+ I I F G+HGDG+PFDG G LAH++ P G
Sbjct: 149 NKAFKVWSEYTDLVFIQKKSGQ-VHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGGDA 207
Query: 151 HLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDL 210
H D AE W +D S +L VA HE GH LGL+HS VK A+M P + L
Sbjct: 208 HFDDAEQWTID-----SFRGTNLFQVAAHEFGHSLGLSHSDVKAALMAPFYRGYQPYFQL 262
Query: 211 ALDDIQGVQALYGSNPNFTIGSLVESDISTNLA 243
DDIQG+QALYG + G + + T A
Sbjct: 263 DDDDIQGIQALYGKKSASSGGVPIGPNYGTTTA 295
>gi|58176632|pdb|1RMZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor Nngh At 1.3 A Resolution
gi|122920455|pdb|2HU6|A Chain A, Crystal Structure Of Human Mmp-12 In Complex With
Acetohydroxamic Acid And A Bicyclic Inhibitor
gi|134105464|pdb|2OXU|A Chain A, Uninhibited Form Of Human Mmp-12
gi|134105465|pdb|2OXW|A Chain A, Human Mmp-12 Complexed With The Peptide Iag
gi|134105467|pdb|2OXZ|A Chain A, Human Mmp-12 In Complex With Two Peptides Pqg And Iag
gi|159163643|pdb|1YCM|A Chain A, Solution Structure Of Matrix Metalloproteinase 12 (Mmp12)
In The Presence Of N-Isobutyl-N-[4-
Methoxyphenylsulfonyl]glycyl Hydroxamic Acid (Nngh)
gi|159163662|pdb|1Z3J|A Chain A, Solution Structure Of Mmp12 In The Presence Of
N-Isobutyl-N- 4-Methoxyphenylsulfonyl]glycyl Hydroxamic
Acid (Nngh)
gi|291191398|pdb|1Y93|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With Acetohydroxamic Acid At Atomic Resolution
gi|305677774|pdb|3LIK|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|305677775|pdb|3LIL|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|305677776|pdb|3LIR|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|305677777|pdb|3LJG|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
gi|392311623|pdb|3TS4|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
gi|392311624|pdb|3TSK|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
gi|392311755|pdb|4EFS|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
gi|448262547|pdb|4GQL|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470.1
gi|448262548|pdb|4GR0|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470b
gi|448262549|pdb|4GR3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470a
Length = 159
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 3 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 56
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 57 VVFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 110
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 111 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 159
>gi|1705981|sp|Q10738.1|MMP7_MOUSE RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|548182|gb|AAA99984.1| matrilysin [Mus musculus]
gi|148692994|gb|EDL24941.1| matrix metallopeptidase 7 [Mus musculus]
Length = 264
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y L P P+W + +++ + L + + K+A W+ IP++F
Sbjct: 94 EYSLMPNSPKWHSRIVTYRIVSYTSD-----LPRIVVDQIVKKALRMWSMQIPLNFKRVS 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF DHGD PFDG L H+F+P G H D E W ++
Sbjct: 149 -WGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYW-----TDGE 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
V+ A HE GH LGL+HS V VMYPT + RD D +L DDI G+Q LYG
Sbjct: 203 DAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQ-RDYSEDFSLTKDDIAGIQKLYG 259
>gi|149053668|gb|EDM05485.1| matrix metallopeptidase 28 (epilysin) (predicted) [Rattus
norvegicus]
Length = 475
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R KK + PG + +H LSY N L ++ + AF W++V + F
Sbjct: 118 RRKKRFAK-PGHKWYKQH----LSYRLV--NWPKSLPEPAVRGAVRAAFQLWSNVSALEF 170
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E ADIR+ F+ GDH DG FDG G LAH+F P G+ H D E W++
Sbjct: 171 WEAPATGPADIRLTFFQGDHNDGLANAFDGPGGALAHAFLPRRGEAHFDQDERWSLSRRR 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+ +L V HEIGH LGLTHSP A+M P K + L+ DD+ VQ LY
Sbjct: 231 GR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKKLGRDALLSWDDVLAVQNLY 283
>gi|432894409|ref|XP_004075979.1| PREDICTED: matrix metalloproteinase-20-like [Oryzias latipes]
Length = 521
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+++ +P KP+W H ++Y +K + D++ F A W P+ F +
Sbjct: 105 ENFGFYPFKPKWKNH---NVTYKIAK--YTPDMSKEDVEKAFHSALKMWREAAPLRFTQV 159
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEK 166
ADI + F HGD PFDG GVLAH+F P G H D ETW G++
Sbjct: 160 TSGS-ADIVLTFARKTHGDFFPFDGPGGVLAHAFQPGERMGGDVHFDEDETWTA--GNQ- 215
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGS- 224
+L +VA HEIGH LGL+HS + A+MYP + + L+ DD+ G+Q LYG
Sbjct: 216 ---GYNLFAVAAHEIGHSLGLSHSKDRSAIMYPNYRYHSSTQHALSKDDMLGIQMLYGKP 272
Query: 225 NPNFTIGSLVESDISTNLAVD 245
N I S + + + D
Sbjct: 273 NQKVEIQSTAPQNCDPDFSFD 293
>gi|15825642|pdb|1FLS|A Chain A, Solution Structure Of The Catalytic Fragment Of Human
Collagenase-3 (Mmp-13) Complexed With A Hydroxamic Acid
Inhibitor
gi|15825643|pdb|1FM1|A Chain A, Solution Structure Of The Catalytic Fragment Of Human
Collagenase-3 (Mmp-13) Complexed With A Hydroxamic Acid
Inhibitor
gi|109157040|pdb|1ZTQ|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-033
gi|109157041|pdb|1ZTQ|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-033
gi|109157042|pdb|1ZTQ|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-033
gi|109157043|pdb|1ZTQ|D Chain D, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-033
gi|145579292|pdb|2E2D|A Chain A, Flexibility And Variability Of Timp Binding: X-Ray
Structure Of The Complex Between Collagenase-3MMP-13 And
Timp-2
gi|185177543|pdb|2PJT|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-344
gi|185177544|pdb|2PJT|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-344
gi|185177545|pdb|2PJT|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-344
gi|185177546|pdb|2PJT|D Chain D, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With Way-344
Length = 165
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|319072680|ref|NP_001187264.1| matrix metalloproteinase 13 precursor [Ictalurus punctatus]
gi|291195939|gb|ADD84683.1| matrix metalloproteinase 13 [Ictalurus punctatus]
Length = 471
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+WT T S + EN + + ++ +RA WA V P+ F ADI I
Sbjct: 109 KWT-----TNSLTYRIENYTPDMSVAEVDDSIQRALQVWARVTPLKFKRIYS-GIADIMI 162
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F GDH DG PFDG G LAH+F P G H D ET++ +S +L V
Sbjct: 163 SFVVGDHRDGSPFDGPNGFLAHAFFPGVGIGGDAHFDDDETFSF-----RSTRGYNLFLV 217
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSN 225
A HE GH LGL HS V A+MYPT + L DD++ +QALYGSN
Sbjct: 218 AAHEFGHSLGLEHSNVPGALMYPTYSYTNPDTFVLPRDDVKRIQALYGSN 267
>gi|326914436|ref|XP_003203531.1| PREDICTED: 72 kDa type IV collagenase-like [Meleagris gallopavo]
Length = 267
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
DY F G PRW + L+Y ++NY L + +RA W+ V P+ F
Sbjct: 97 DYQTFSGSPRWNKKY---LTY-----KIVNYTPDLPREYVNDAIRRALMVWSDVTPLRFK 148
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
ADI I F HGDG PFDG G LAH+F P G H D E W+
Sbjct: 149 RVTQ-GHADIVIKFARRAHGDGYPFDGRSGTLAHAFQPGEGLGGDAHFDDDERWS----- 202
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
K V+L VA HE GH LGL HS V+ A+MYP + + L DD +G+Q LYG
Sbjct: 203 -KYNQGVNLFLVAAHEFGHSLGLAHSNVRGALMYPLYSYVNPETFTLPQDDRRGIQKLYG 261
>gi|134105439|pdb|2OW9|A Chain A, Crystal Structure Analysis Of The Mmp13 Catalytic Domain
In Complex With Specific Inhibitor
gi|134105440|pdb|2OW9|B Chain B, Crystal Structure Analysis Of The Mmp13 Catalytic Domain
In Complex With Specific Inhibitor
gi|157835594|pdb|2OZR|A Chain A, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835595|pdb|2OZR|B Chain B, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835596|pdb|2OZR|C Chain C, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835597|pdb|2OZR|D Chain D, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835598|pdb|2OZR|E Chain E, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835599|pdb|2OZR|F Chain F, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835600|pdb|2OZR|G Chain G, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
gi|157835601|pdb|2OZR|H Chain H, Mmp13 Catalytic Domain Complexed With
4-{[1-Methyl-2,4-Dioxo-6-(3-
Phenylprop-1-Yn-1-Yl)-1,
4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
Length = 170
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 4 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 55
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 56 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 108
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 109 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 167
>gi|444724327|gb|ELW64934.1| Collagenase 3 [Tupaia chinensis]
Length = 497
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 22/181 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W+ + L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSN---VNLTY-----RIVNYTPDMTHSEVEKAFRKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHYVLPDDDVQGIQSLYG 267
Query: 224 S 224
S
Sbjct: 268 S 268
>gi|390463285|ref|XP_003733004.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28
[Callithrix jacchus]
Length = 521
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 37 SDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
SD + + R +K G + +H LSY N L ++ + AF
Sbjct: 108 SDLFAGHQTQRRRKKRFAKQGNKWYKQH----LSYRLV--NWPERLPEPAVRGAVRAAFQ 161
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDA 154
W++V + F E ADIR+ F+ DH DG FDG G LAH+F P G+ H D
Sbjct: 162 LWSNVSALEFWEAPATGPADIRLTFFQXDHNDGLGNAFDGPGGALAHAFLPRRGEAHFDQ 221
Query: 155 AETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
E W++ + +L V HEIGH LGLTHSP A+M P K + L+ DD
Sbjct: 222 DERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPRALMAPYYKRLGRDTLLSWDD 276
Query: 215 IQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
+ VQ+LYG +G V + L D
Sbjct: 277 VLAVQSLYGK----PLGGSVAVQLPGKLFTDF 304
>gi|213424472|pdb|3F15|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
(S)-N-(2,3-Dihydroxypropyl)-4-
Methoxy-N-(2-Nitroso-2-Oxoethyl)benzenesulfonamide
gi|213424473|pdb|3F16|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
(R)-N-(3-Hydroxy-1-Nitroso-1-
Oxopropan-2-Yl)-4-Methoxybenzenesulfonamide
gi|213424527|pdb|3F17|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
Biphenyl-4-Sulfonamide
gi|213424536|pdb|3F18|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
4-Fluoro-N-(2-Hydroxyethyl)-N-
(2-Nitroso-2-Oxoethyl)benzenesulfonamide
gi|213424542|pdb|3F19|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor 4-Fluoro-N-(2-Nitroso-2-
Oxoethyl)benzenesulfonamide
gi|213424543|pdb|3F1A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
Benzenesulfonamide
gi|237823818|pdb|3EHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor (R)-2-(Biphenyl-4-
Ylsulfonamido)-4-Methylpentanoic Acid
gi|237823819|pdb|3EHY|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor (R)-2-(4-
Methoxyphenylsulfonamido)propanoic Acid
gi|295982407|pdb|3LKA|A Chain A, Catalytic Domain Of Human Mmp-12 Complexed With Hydroxamic
Acid And Paramethoxy-Sulfonyl Amide
gi|301598833|pdb|3NX7|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(N-(2-Hydroxyethyl)4-
Methoxyphenylsulfonamido)acetamide
gi|308198526|pdb|3LK8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
Paramethoxy-Sulfonyl-Glycine Hydroxamate
gi|311772155|pdb|3N2U|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(4-Methoxy-N(2-(3,4,5-Trihydroxy-6-
(Hydroxymethyl)tetrahydro-2h-Pyran-2-
Yloxy)ethyl)phenylsulfonamido) Acetamide
gi|311772156|pdb|3N2V|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
Complexed With The Inhibitor
N-Hydroxy-2-(N-Hydroxyethyl)biphenyl-4-
Ylsulfonamido)acetamide
gi|393715146|pdb|3RTS|A Chain A, Human Mmp-12 Catalytic Domain In Complex
WithN-Hydroxy-2-(2- Phenylethylsulfonamido)acetamide
gi|393715147|pdb|3RTT|A Chain A, Human Mmp-12 Catalytic Domain In Complex
With(R)-N-Hydroxy-1-
(Phenethylsulfonyl)pyrrolidine-2-Carboxamide
gi|405945115|pdb|4GUY|A Chain A, Human Mmp12 Catalytic Domain In Complex
WithN-Hydroxy-2-(2-(4-
Methoxyphenyl)ethylsulfonamido)acetamide
Length = 158
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 2 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 55
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 56 VVFARGAHGDDHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 109
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 110 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 158
>gi|157278511|ref|NP_001098357.1| membrane-type matrix metalloproteinase precursor [Oryzias latipes]
gi|67077823|dbj|BAD99513.1| membrane-type matrix metalloproteinase [Oryzias latipes]
Length = 610
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASV-------IPVSFIETDDYDFADIRIGFYNG 124
FS +N + + +RAF W V IP S+I FADI I F G
Sbjct: 123 TFSIQNYTPKVGEYETHEAIRRAFKIWEKVTPLRFREIPYSYIRDKVEKFADIMIFFAEG 182
Query: 125 DHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEI 181
HGD PFDG G LAH++ P G H DAAE W + K D+ VAVHE+
Sbjct: 183 FHGDSSPFDGEGGFLAHAYFPGDGIGGDTHFDAAEPWTI---GNKDLSGNDVFLVAVHEL 239
Query: 182 GHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPNF 228
GH LGL HS A+M P + D + L DD +G+Q +YGS NF
Sbjct: 240 GHALGLEHSNDPSAIMAPFYQWMDTENFQLPDDDRRGIQQIYGSGSNF 287
>gi|357602586|gb|EHJ63458.1| hypothetical protein KGM_02930 [Danaus plexippus]
Length = 504
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 97/192 (50%), Gaps = 15/192 (7%)
Query: 32 FKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVF 91
FK K+ D + K Y+L G W R + + N + L + ++A+
Sbjct: 88 FKRKRCGVKDIETKSNKIKRYILQQG---WGRK-----AITYRVINGSSTLEKSRVEALM 139
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFH 151
A + WA + F ADI++ F + DHGDG PFDG V+AH+F P G H
Sbjct: 140 ANALAVWAPHGNLRFKSLSSA--ADIQVSFASKDHGDGFPFDGPGHVVAHAFPPPHGAMH 197
Query: 152 LDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDL 210
D E W D +E+ D +VAVHE+GH LGL+HS VK +VMYP + P +K L
Sbjct: 198 FDDDEQWG-DNANEEDEDVTDFFAVAVHEVGHALGLSHSNVKSSVMYPYYQVPVEK---L 253
Query: 211 ALDDIQGVQALY 222
DDI G+Q LY
Sbjct: 254 HEDDILGMQELY 265
>gi|326914448|ref|XP_003203537.1| PREDICTED: stromelysin-1-like [Meleagris gallopavo]
Length = 493
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 89/183 (48%), Gaps = 20/183 (10%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ Y FP PRW + ++Y ++NY + D+ +AF W+SV P+ F
Sbjct: 76 RSYSTFPQNPRWKKE---DVTY-----RILNYTPDMLQADVDEAIAKAFQLWSSVTPLRF 127
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFG 163
D ADI I F +G HGD FDG G LAH++ P G H D E W
Sbjct: 128 NRLYSGD-ADIMISFASGFHGDFYSFDGPGGTLAHAYPPSRGIGGDAHFDEDENWT---- 182
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
+ +L VA HE+GH LGL HS V A+MYP +D + L DDI G+QALY
Sbjct: 183 KFTTYSGYNLFLVAAHELGHSLGLGHSNVFGALMYPIYMAKDTRNYRLHQDDINGIQALY 242
Query: 223 GSN 225
G
Sbjct: 243 GKQ 245
>gi|240269310|gb|ACS52520.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269312|gb|ACS52521.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269314|gb|ACS52522.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269316|gb|ACS52523.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269318|gb|ACS52524.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269320|gb|ACS52525.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269322|gb|ACS52526.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269324|gb|ACS52527.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269326|gb|ACS52528.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269328|gb|ACS52529.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269330|gb|ACS52530.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269332|gb|ACS52531.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269334|gb|ACS52532.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269336|gb|ACS52533.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269338|gb|ACS52534.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269340|gb|ACS52535.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269342|gb|ACS52536.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269344|gb|ACS52537.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269346|gb|ACS52538.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269348|gb|ACS52539.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269350|gb|ACS52540.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269352|gb|ACS52541.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269354|gb|ACS52542.1| putative matrix metalloproteinase [Anopheles arabiensis]
gi|240269356|gb|ACS52543.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269360|gb|ACS52545.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269362|gb|ACS52546.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269364|gb|ACS52547.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269366|gb|ACS52548.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269368|gb|ACS52549.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269370|gb|ACS52550.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269372|gb|ACS52551.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269374|gb|ACS52552.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269376|gb|ACS52553.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269378|gb|ACS52554.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269380|gb|ACS52555.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269382|gb|ACS52556.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269384|gb|ACS52557.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269386|gb|ACS52558.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269388|gb|ACS52559.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269392|gb|ACS52561.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269394|gb|ACS52562.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269396|gb|ACS52563.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269398|gb|ACS52564.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269400|gb|ACS52565.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269402|gb|ACS52566.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269404|gb|ACS52567.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269406|gb|ACS52568.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269408|gb|ACS52569.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269410|gb|ACS52570.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269412|gb|ACS52571.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269414|gb|ACS52572.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269416|gb|ACS52573.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269418|gb|ACS52574.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269420|gb|ACS52575.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269422|gb|ACS52576.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269424|gb|ACS52577.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269426|gb|ACS52578.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269428|gb|ACS52579.1| putative matrix metalloproteinase [Anopheles gambiae]
gi|240269430|gb|ACS52580.1| putative matrix metalloproteinase [Anopheles merus]
gi|240269432|gb|ACS52581.1| putative matrix metalloproteinase [Anopheles quadriannulatus]
gi|240269434|gb|ACS52582.1| putative matrix metalloproteinase [Anopheles melas]
Length = 210
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + S P+ +K DK TR K+ Y L + +R L+Y SK
Sbjct: 8 ETMQLMSLPRCGVK--DKVGFGSDTRSKR-YAL-----QGSRWKVKDLTYRISK--YPRR 57
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L T + +AF W+ + F I I F +HGDG+PFDG G LAH
Sbjct: 58 LERTAVDKEIAKAFGVWSEYTDLRFTPKKT-GAVHIDIRFEENEHGDGDPFDGPGGTLAH 116
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D AE W +D P +L VA HE GH LGL+HS V+ A+M P
Sbjct: 117 AYFPVYGGDAHFDDAEQWTID-----KPRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPF 171
Query: 201 LKPRDKKVDLALDDIQGVQALYGS---NPNFTIGS 232
+ D L DDIQG+Q LYG+ NP G+
Sbjct: 172 YRGYDPVFRLDSDDIQGIQTLYGTKTRNPGGGAGA 206
>gi|110591107|pdb|2D1N|A Chain A, Collagenase-3 (Mmp-13) Complexed To A Hydroxamic Acid
Inhibitor
gi|110591108|pdb|2D1N|B Chain B, Collagenase-3 (Mmp-13) Complexed To A Hydroxamic Acid
Inhibitor
Length = 166
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|449484651|ref|XP_002198005.2| PREDICTED: collagenase 3 [Taeniopygia guttata]
Length = 459
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP K +W++ M L+Y N + L ++ FK+AF W+ V P++F
Sbjct: 104 EYNFFPRKLKWSK---MNLTYRIM--NYTSDLKRNEVDRAFKKAFKVWSDVTPLNFTRIR 158
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI I F +HGD PFDG G+LAH+F P G H D E W+ D
Sbjct: 159 S-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDEVWSDD------ 211
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGS 224
+L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 212 SKGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVLPDDDVQGIQELYGC 269
>gi|395520415|ref|XP_003764328.1| PREDICTED: stromelysin-1 [Sarcophilus harrisii]
Length = 477
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 23/181 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ LFP P+W ++ ++Y ++NY ++ D A +RA W+ V P++F
Sbjct: 102 FRLFPYMPKWKKN---EVTY-----RIVNYTADMNQIDTDAAIERALKVWSDVTPLTFHR 153
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG GVL H++ P +G HLD E W
Sbjct: 154 LREGE-ADIMISFAVQEHGDFIPFDGPGGVLGHAYPPGPKINGDVHLDDDEKWT------ 206
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K V+L VA HE GH LGL HS +A+MYP + L+ DDI G+Q+LYG
Sbjct: 207 KDTTGVNLFLVAAHEFGHSLGLFHSTDTKALMYPIYNANTDLTRFFLSQDDIAGIQSLYG 266
Query: 224 S 224
S
Sbjct: 267 S 267
>gi|261244992|ref|NP_001159651.1| collagenase 3 precursor [Ovis aries]
gi|256665393|gb|ACV04842.1| matrix metallopeptidase 13 [Ovis aries]
Length = 471
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|395743423|ref|XP_003777921.1| PREDICTED: uncharacterized protein LOC100462632 [Pongo abelii]
Length = 992
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHN-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
++ D+ ++AF W++V P+ F + ADI + F G HGD FDG G+LAH
Sbjct: 647 MNREDVDYAIRKAFQVWSNVTPLKFSKIHT-GVADILVVFARGAHGDFHAFDGKGGILAH 705
Query: 142 SFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P S G H D E W SE +L AVHEIGH LGL HS +A+M+
Sbjct: 706 AFGPGSGIGGDAHFDEDEFWTTH--SE----GTNLFLTAVHEIGHSLGLGHSSDPKAIMF 759
Query: 199 PTLKPRD-KKVDLALDDIQGVQALYGS--------NPNFTIGSLVESDIS 239
PT K D L+ DDI+G+Q+LYG NP+ + +L + ++S
Sbjct: 760 PTYKYVDINTFRLSADDIRGIQSLYGDPKENQHLPNPDNSEPALCDPNLS 809
>gi|292625366|ref|XP_694153.3| PREDICTED: stromelysin-3 [Danio rerio]
Length = 496
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 45 ATRHK-KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
RH+ K + LFPG RW + +T S M ++ ++ V + A W+ P
Sbjct: 104 GGRHRRKRFDLFPG--RWDK-TDLTYKIIQSPRQM----NLERVRYVIREALRAWSDETP 156
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAV 160
++F E ADI FY HGD FDG G+LAH+F P + G+ H D E+W +
Sbjct: 157 LNFTEVLS-GRADIMFDFYRYSHGDYLNFDGPGGILAHAFFPRTYREGEIHFDMDESWTL 215
Query: 161 DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
+ + DL VA HEIGH+LGL HS V AVM P V L+ DD +G+QA
Sbjct: 216 G-----NSMGTDLLQVATHEIGHVLGLQHSKVPGAVMAP-FYTFSNPVRLSEDDKRGIQA 269
Query: 221 LYGS 224
LYGS
Sbjct: 270 LYGS 273
>gi|311772040|pdb|3KEC|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With A
Phenyl-2h-Tetrazole Compound
gi|311772041|pdb|3KEC|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With A
Phenyl-2h-Tetrazole Compound
gi|311772042|pdb|3KEJ|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With A
(Pyridin-4-Yl)-2h- Tetrazole Compound
gi|311772043|pdb|3KEJ|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With A
(Pyridin-4-Yl)-2h- Tetrazole Compound
gi|311772044|pdb|3KEK|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With A
(Pyridin-4-Yl)-2h- Tetrazole Compound
gi|311772045|pdb|3KEK|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With A
(Pyridin-4-Yl)-2h- Tetrazole Compound
Length = 167
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|14278516|pdb|1EUB|A Chain A, Solution Structure Of The Catalytic Domain Of Human
Collagenase-3 (Mmp-13) Complexed To A Potent
Non-Peptidic Sulfonamide Inhibitor
gi|82407471|pdb|1XUC|A Chain A, Matrix Metalloproteinase-13 Complexed With Non-Zinc
Binding Inhibitor
gi|82407472|pdb|1XUC|B Chain B, Matrix Metalloproteinase-13 Complexed With Non-Zinc
Binding Inhibitor
gi|82407473|pdb|1XUD|A Chain A, Matrix Metalloproteinase-13 Complexed With Non-Zinc
Binding Inhibitor
gi|82407474|pdb|1XUD|B Chain B, Matrix Metalloproteinase-13 Complexed With Non-Zinc
Binding Inhibitor
gi|82407477|pdb|1XUR|A Chain A, Matrix Metalloproteinase-13 Complexed With Non-Zinc
Binding Inhibitor
gi|82407478|pdb|1XUR|B Chain B, Matrix Metalloproteinase-13 Complexed With Non-Zinc
Binding Inhibitor
gi|254574820|pdb|3ELM|A Chain A, Crystal Structure Of Mmp-13 Complexed With Inhibitor 24f
gi|254574821|pdb|3ELM|B Chain B, Crystal Structure Of Mmp-13 Complexed With Inhibitor 24f
gi|257097686|pdb|3I7G|A Chain A, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
gi|257097687|pdb|3I7G|B Chain B, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
gi|257097688|pdb|3I7I|A Chain A, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
gi|257097689|pdb|3I7I|B Chain B, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
gi|340708402|pdb|2YIG|A Chain A, Mmp13 In Complex With A Novel Selective Non Zinc Binding
Inhibitor
gi|340708403|pdb|2YIG|B Chain B, Mmp13 In Complex With A Novel Selective Non Zinc Binding
Inhibitor
gi|353251993|pdb|3ZXH|A Chain A, Mmp-13 Complexed With 2-Napthylsulfonamide Hydroxamic Acid
Inhibitor
gi|353251994|pdb|3ZXH|B Chain B, Mmp-13 Complexed With 2-Napthylsulfonamide Hydroxamic Acid
Inhibitor
Length = 171
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|291195937|gb|ADD84682.1| matrix metalloproteinase 13 [Ictalurus punctatus]
Length = 471
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+WT T S + EN + + ++ +RA WA V P+ F ADI I
Sbjct: 109 KWT-----TNSLTYRIENYTPDMSVAEVDHSIQRALQVWARVTPLKFKRIYS-GIADIMI 162
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F GDH DG PFDG G LAH+F P G H D ET++ +S +L V
Sbjct: 163 SFVVGDHRDGSPFDGPNGFLAHAFFPGVGIGGDAHFDDDETFSF-----RSTRGYNLFLV 217
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSN 225
A HE GH LGL HS V A+MYPT + L DD++ +QALYGSN
Sbjct: 218 AAHEFGHSLGLEHSNVPGALMYPTYSYTNPDTFVLPRDDVKRIQALYGSN 267
>gi|5822548|pdb|456C|A Chain A, Crystal Structure Of Collagenase-3 (Mmp-13) Complexed To A
Diphenyl-Ether Sulphone Based Hydroxamic Acid
gi|5822549|pdb|456C|B Chain B, Crystal Structure Of Collagenase-3 (Mmp-13) Complexed To A
Diphenyl-Ether Sulphone Based Hydroxamic Acid
gi|5822584|pdb|830C|A Chain A, Collagenase-3 (Mmp-13) Complexed To A Sulphone-Based
Hydroxamic Acid
gi|5822585|pdb|830C|B Chain B, Collagenase-3 (Mmp-13) Complexed To A Sulphone-Based
Hydroxamic Acid
gi|62738698|pdb|1YOU|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With A Potent Pyrimidinetrione Inhibitor
gi|62738699|pdb|1YOU|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-13
Complexed With A Potent Pyrimidinetrione Inhibitor
Length = 168
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|148227598|ref|NP_001088503.1| matrix metallopeptidase 8 (neutrophil collagenase) precursor
[Xenopus laevis]
gi|54311407|gb|AAH84836.1| LOC495372 protein [Xenopus laevis]
Length = 466
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG P W + L+Y ++NY + ++ ++AF W+ V P++F
Sbjct: 98 NFRAFPGNPVWKKK---DLTY-----RILNYTPDMTREEVDRAIQKAFKVWSDVTPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
+D ADI I F H D PFDG G LAH+F+P + G H D E W
Sbjct: 150 RVND-GVADIEISFAAQVHNDFYPFDGPYGTLAHAFAPGNNIGGDAHFDEDEDWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
V +L VA HE GH LGL HS A+MYPT D L DD+ G+Q+LYG
Sbjct: 204 -SGSVGFNLFLVAAHEFGHSLGLFHSNDPSALMYPTYHYVDPSTFQLPQDDVNGIQSLYG 262
Query: 224 S 224
+
Sbjct: 263 A 263
>gi|431916540|gb|ELK16518.1| Stromelysin-2 [Pteropus alecto]
Length = 468
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 DFSTFPGMPKWRK---TRLTY-----RIVNYTLDLPRDAVDSAIEKALKVWEEVTPLTFS 151
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ + ADI I F +HGD PFDG VLAH+FSP +G H D E W D
Sbjct: 152 RIYEGE-ADILITFAAREHGDFIPFDGPGMVLAHAFSPGPGINGDAHFDDDEKWTKDTS- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS EA+MYP P + L+ DD+ G+Q+LY
Sbjct: 210 -----GTNLFLVAAHELGHSLGLYHSANSEALMYPVYNPFTDLARFRLSQDDVNGIQSLY 264
Query: 223 G 223
G
Sbjct: 265 G 265
>gi|197384336|ref|NP_001128002.1| matrix metallopeptidase 1a precursor [Rattus norvegicus]
gi|197246479|gb|AAI69019.1| Mmp1a protein [Rattus norvegicus]
Length = 464
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y + PRWT+ +S N YL I+ +RAF W+ V P++F +
Sbjct: 97 YAITHNNPRWTK-----THLTYSILNYTPYLPKEVIENAIERAFKVWSDVTPLTFERVFE 151
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ DI FY GDH D PFDG LAH+F P G H D ETW + +
Sbjct: 152 EE-GDIVFAFYRGDHSDNNPFDGPEYGLAHTFPPGPRLGGDVHYDLDETWTDNSDN---- 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L V HE+GH LGLTHS A+M+P+ + L +DI +QALYG +PN
Sbjct: 207 --FNLFYVTAHELGHSLGLTHSRDVGALMFPSYTWYTEDFVLNQEDINRIQALYGPSPN 263
>gi|364506273|pdb|4A7B|A Chain A, Mmp13 In Complex With A Novel Selective Non Zinc Binding
Inhibitor Cmpd22
gi|364506274|pdb|4A7B|B Chain B, Mmp13 In Complex With A Novel Selective Non Zinc Binding
Inhibitor Cmpd22
gi|392311626|pdb|3TVC|A Chain A, Human Mmp13 In Complex With L-Glutamate Motif Inhibitor
Length = 169
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 LHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 106 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|345322976|ref|XP_003430660.1| PREDICTED: interstitial collagenase-like isoform 5 [Ornithorhynchus
anatinus]
Length = 472
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G P+W + ++Y K +L D+ K+AF W+ V P++F + + AD
Sbjct: 128 GNPKWDK---TEITYRIVK--YTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEE-AD 181
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F++GDH D PF G GVLAH+F P G H D ETW KS + +L
Sbjct: 182 IMISFFSGDHYDNSPFYGPDGVLAHAFPPGKLIGGDIHFDEDETWT------KSHLNYNL 235
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VA HEIGH LGL HS A+M P D L DDI G+Q +YG
Sbjct: 236 FLVAAHEIGHALGLAHSQDIGALMSPVYSYMDIDPFKLPQDDIDGIQKIYG 286
>gi|73955220|ref|XP_536598.2| PREDICTED: collagenase 3 [Canis lupus familiaris]
Length = 470
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 102 EYNVFPRTLKWSK---TNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 154 RLHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 208 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 266
Query: 224 ---SNPN 227
+PN
Sbjct: 267 PGDEDPN 273
>gi|114325422|gb|AAH19135.2| Matrix metallopeptidase 12 [Mus musculus]
Length = 473
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW KS +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++M PT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMDPTYRYLNPNTFRLSADDIRNIQSLYGA 268
>gi|326914446|ref|XP_003203536.1| PREDICTED: collagenase 3-like [Meleagris gallopavo]
Length = 512
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y FP K +W++ L+Y +++Y L D++ FK+AF W+ V P++F
Sbjct: 144 EYNFFPRKLKWSK---TNLTY-----RIVSYTPDLRRADVERAFKKAFKVWSDVTPLNFT 195
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
ADI I F +HGD PFDG G+LAH+F P G H D ETW+ D
Sbjct: 196 RIRS-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDETWSND--- 251
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 252 ---SRGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVLPDDDVQGIQELYG 308
Query: 224 ---SNPN 227
+PN
Sbjct: 309 PGDRDPN 315
>gi|47222761|emb|CAG01728.1| unnamed protein product [Tetraodon nigroviridis]
Length = 316
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y L P K +W + +T N+IN +D + +AF+ W+ V P SF E
Sbjct: 3 KRYTLTPEKLKWDK-FKLTYKLLSFPTNLIN---ASDTRRGIAKAFALWSDVSPFSFREV 58
Query: 110 DDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD-- 161
+ ADI+IGFY +H D FDG+ G LAH+F P++G+ H D E W +
Sbjct: 59 PADEEADIKIGFYPVNHTDCLQSYLHHCFDGITGELAHAFFPQTGEIHFDDHEYWILGNM 118
Query: 162 -FGSEKSPVAV-DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
F +K V + DL VA HEIGH+LG+ HS +A+M+ +K+ + D++ G+
Sbjct: 119 RFSWKKGRVWLTDLVHVATHEIGHVLGIMHSMDPKAIMHLNANLTGRKL-ITQDEVWGLH 177
Query: 220 ALYGS 224
LYG
Sbjct: 178 RLYGC 182
>gi|345322970|ref|XP_001509119.2| PREDICTED: interstitial collagenase-like isoform 1 [Ornithorhynchus
anatinus]
Length = 491
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G P+W + ++Y K +L D+ K+AF W+ V P++F + + AD
Sbjct: 128 GNPKWDK---TEITYRIVK--YTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEE-AD 181
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F++GDH D PF G GVLAH+F P G H D ETW KS + +L
Sbjct: 182 IMISFFSGDHYDNSPFYGPDGVLAHAFPPGKLIGGDIHFDEDETWT------KSHLNYNL 235
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VA HEIGH LGL HS A+M P D L DDI G+Q +YG
Sbjct: 236 FLVAAHEIGHALGLAHSQDIGALMSPVYSYMDIDPFKLPQDDIDGIQKIYG 286
>gi|57529313|ref|NP_001006278.1| matrilysin precursor [Gallus gallus]
gi|53126797|emb|CAG30985.1| hypothetical protein RCJMB04_1g18 [Gallus gallus]
Length = 263
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y F G PRW + L+Y ++NY L + +RA W++V P+ F
Sbjct: 93 NYQTFYGSPRWNKKY---LTY-----KIVNYTPDLPREYVDDAIRRALMVWSNVTPLRFK 144
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
ADI I F HGDG PFDG G LAH+F P G H D E W+
Sbjct: 145 RVTSGQ-ADIMIKFARRAHGDGYPFDGRGGTLAHAFQPGEGLGGDAHFDDDERWS----- 198
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
K V+L VA HE GH LGL HS V+ A+MYP + + L DD +G+Q LYG
Sbjct: 199 -KYNQGVNLFLVAAHEFGHSLGLAHSNVRGALMYPLYSYVNPETFTLHWDDRRGIQKLYG 257
Query: 224 SN 225
N
Sbjct: 258 RN 259
>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
Length = 494
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L +++ RAF W V P+ F T +DI I F HGDG PFDG G LAH
Sbjct: 117 LDRAEVEDAIYRAFRIWEQVTPLRFSRTSGT--SDIEISFVQFSHGDGNPFDGRGGTLAH 174
Query: 142 SFSPESG---KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
++ P +G H D +E W V ++ +L VA HE GH LGL HS V A+MY
Sbjct: 175 AYFPGTGIGGDAHFDESEQWTV-----RTARGTNLFIVAAHEFGHSLGLEHSQVLGALMY 229
Query: 199 PTLKPRDKKVDLALDDIQGVQALYGSNPNFTI 230
P + + L DDI G+Q +YG+ +F +
Sbjct: 230 PFYQGYVEDFQLDYDDILGIQTIYGTVASFLL 261
>gi|62897055|dbj|BAD96468.1| matrix metalloproteinase 13 preproprotein variant [Homo sapiens]
Length = 471
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGPLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|240269358|gb|ACS52544.1| putative matrix metalloproteinase [Anopheles gambiae]
Length = 210
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + S P+ +K DK TR K+ Y L + +R L+Y SK
Sbjct: 8 ETMQLMSLPRCGVK--DKVGFGSDTRSKR-YAL-----QGSRWKVKDLTYRISK--YPRR 57
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L T + +AF W+ + F I I F +HGDG+PFDG G LAH
Sbjct: 58 LERTAVDKEIAKAFXVWSEYTDLRFTPKKT-GAVHIDIRFEENEHGDGDPFDGPGGTLAH 116
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D AE W +D P +L VA HE GH LGL+HS V+ A+M P
Sbjct: 117 AYFPVYGGDAHFDDAEQWTID-----KPRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPF 171
Query: 201 LKPRDKKVDLALDDIQGVQALYGS---NPNFTIGS 232
+ D L DDIQG+Q LYG+ NP G+
Sbjct: 172 YRGYDPVFRLDSDDIQGIQTLYGTKTRNPGGGAGA 206
>gi|6573123|gb|AAF17559.1|AF201729_1 matrix metalloproteinase-13 [Canis lupus familiaris]
Length = 452
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 95 EYNVFPRTLKWSK---TNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 146
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 147 RLHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 200
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 201 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 259
Query: 224 ---SNPN 227
+PN
Sbjct: 260 PGDEDPN 266
>gi|345322968|ref|XP_003430657.1| PREDICTED: interstitial collagenase-like isoform 2 [Ornithorhynchus
anatinus]
Length = 493
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G P+W + ++Y K +L D+ K+AF W+ V P++F + + AD
Sbjct: 128 GNPKWDK---TEITYRIVK--YTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEE-AD 181
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F++GDH D PF G GVLAH+F P G H D ETW KS + +L
Sbjct: 182 IMISFFSGDHYDNSPFYGPDGVLAHAFPPGKLIGGDIHFDEDETWT------KSHLNYNL 235
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VA HEIGH LGL HS A+M P D L DDI G+Q +YG
Sbjct: 236 FLVAAHEIGHALGLAHSQDIGALMSPVYSYMDIDPFKLPQDDIDGIQKIYG 286
>gi|198418259|ref|XP_002124733.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 511
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 89/181 (49%), Gaps = 21/181 (11%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIP 103
+ KK Y L GK W L+Y F INY L ++ ++ + AF W
Sbjct: 98 KRKKRYALKGGK--WDHK---QLTYKF-----INYPTKLSVSQSESEIRTAFQWWEDNSS 147
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDF 162
+ F + + ADI I F GDHGD + FDG LAH++ P G H D AE W++
Sbjct: 148 LRFSKVTKGEHADIEIMFAVGDHGDWDSFDGPGHTLAHAYFPVFGGNVHFDEAEPWSIS- 206
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
S V L +VA HE GH LGL+HS V A+M P P K L DDIQ VQ LY
Sbjct: 207 ----SASGVKLGTVAAHEFGHSLGLSHSDVTTALMAPFYSPNTK--GLHSDDIQAVQELY 260
Query: 223 G 223
G
Sbjct: 261 G 261
>gi|345322972|ref|XP_003430658.1| PREDICTED: interstitial collagenase-like isoform 3 [Ornithorhynchus
anatinus]
gi|345322974|ref|XP_003430659.1| PREDICTED: interstitial collagenase-like isoform 4 [Ornithorhynchus
anatinus]
Length = 469
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G P+W + ++Y K +L D+ K+AF W+ V P++F + + AD
Sbjct: 102 GNPKWDK---TEITYRIVK--YTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEE-AD 155
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDL 173
I I F++GDH D PF G GVLAH+F P G H D ETW KS + +L
Sbjct: 156 IMISFFSGDHYDNSPFYGPDGVLAHAFPPGKLIGGDIHFDEDETWT------KSHLNYNL 209
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
VA HEIGH LGL HS A+M P D L DDI G+Q +YG
Sbjct: 210 FLVAAHEIGHALGLAHSQDIGALMSPVYSYMDIDPFKLPQDDIDGIQKIYG 260
>gi|158286645|ref|XP_001688107.1| AGAP006904-PA [Anopheles gambiae str. PEST]
gi|158286647|ref|XP_001688108.1| AGAP006904-PB [Anopheles gambiae str. PEST]
gi|158286649|ref|XP_308849.3| AGAP006904-PC [Anopheles gambiae str. PEST]
gi|157020567|gb|EDO64756.1| AGAP006904-PA [Anopheles gambiae str. PEST]
gi|157020568|gb|EDO64757.1| AGAP006904-PB [Anopheles gambiae str. PEST]
gi|157020569|gb|EAA04040.3| AGAP006904-PC [Anopheles gambiae str. PEST]
Length = 570
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + S P+ +K DK TR K+ Y L + +R L+Y SK
Sbjct: 84 ETMQLMSLPRCGVK--DKVGFGSDTRSKR-YAL-----QGSRWKVKDLTYRISK--YPRR 133
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L T + +AF W+ + F I I F +HGDG+PFDG G LAH
Sbjct: 134 LERTAVDKEIAKAFGVWSEYTDLRFTPKKT-GAVHIDIRFEENEHGDGDPFDGPGGTLAH 192
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D AE W +D P +L VA HE GH LGL+HS V+ A+M P
Sbjct: 193 AYFPVYGGDAHFDDAEQWTID-----KPRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPF 247
Query: 201 LKPRDKKVDLALDDIQGVQALYGS---NPNFTIGS 232
+ D L DDIQG+Q LYG+ NP G+
Sbjct: 248 YRGYDPVFRLDSDDIQGIQTLYGTKTRNPGGGAGA 282
>gi|432864328|ref|XP_004070267.1| PREDICTED: matrix metalloproteinase-23-like [Oryzias latipes]
Length = 353
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 34 LKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKR 93
++Q + +R+K+ Y L P K +W + +T N+IN +D + +
Sbjct: 25 IRQDARTQVLHLSRNKR-YTLTPEKLKWDK-FKLTYKLLSFPTNLIN---ASDTRRGLAK 79
Query: 94 AFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPES 147
AF W+ V P +F E ADI+IGFY +H D FDG+ G LAH+F P +
Sbjct: 80 AFGMWSDVSPFTFREVPADQEADIKIGFYPVNHTDCLQSYLHHCFDGITGELAHAFFPPT 139
Query: 148 GKFHLDAAETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
G+ H D E W V F ++ DL VA HEIGH LGL HS +A+M+
Sbjct: 140 GEIHFDDDEYWIVGNMRFSWKRGVWLTDLIHVATHEIGHALGLMHSMNPKAIMHLNATLT 199
Query: 205 DKKVDLALDDIQGVQALYGS 224
+K+ + D++ G+ LYG
Sbjct: 200 GRKL-ITQDEVWGLHRLYGC 218
>gi|426244417|ref|XP_004016019.1| PREDICTED: stromelysin-1 [Ovis aries]
Length = 477
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 26/187 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A + W V P++F
Sbjct: 100 FSTFPGMPKWRK---THLTY-----RIVNYTKDLPRDAVDSAIEKALTVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P SG + H D E W D
Sbjct: 152 IYEGE-ADIMIIFAVREHGDFLPFDGPGKVLAHAYPPGSGFYGDAHFDDDEQWTKDTS-- 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
++L VA HE GH LGL HS +EA+MYP P + L+ DDI G+Q LYG
Sbjct: 209 ----GINLFLVAAHEFGHSLGLQHSTEREALMYPVYDPLTDLTRFRLSQDDINGIQFLYG 264
Query: 224 S---NPN 227
S +PN
Sbjct: 265 SPLVSPN 271
>gi|6573493|pdb|1QIB|A Chain A, Crystal Structure Of Gelatinase A Catalytic Domain
Length = 161
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAV---FKRAFSKWASVIPVSFIETDDYDF 114
KP+W ++ ++Y +I Y D + V F RAF W+ V P+ F D +
Sbjct: 2 KPKWDKN---QITY-----RIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGE- 52
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F +HGDG PFDG G+LAH+F+P + G H D E W++ G V
Sbjct: 53 ADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWSLGKG-----VGY 107
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
L VA HE GH +GL HS A+M P + K L+ DDI+G+Q LYG++P
Sbjct: 108 SLFLVAAHEFGHAMGLEHSQDPGALMAP-IYTYTKNFRLSQDDIKGIQELYGASP 161
>gi|257471715|pdb|2WO8|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471716|pdb|2WO8|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471717|pdb|2WO8|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471718|pdb|2WO8|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471719|pdb|2WO9|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471720|pdb|2WO9|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471721|pdb|2WO9|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471722|pdb|2WO9|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471723|pdb|2WOA|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471724|pdb|2WOA|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471725|pdb|2WOA|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
gi|257471726|pdb|2WOA|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
Length = 164
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 3 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 56
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 57 VVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 110
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 111 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 159
>gi|350416882|ref|XP_003491150.1| PREDICTED: matrix metalloproteinase-14-like [Bombus impatiens]
Length = 595
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 92 KRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP-ESGKF 150
+AF W+ + FI+ I I F G+HGDG+PFDG G LAH++ P G
Sbjct: 149 NKAFKVWSEYTDLVFIQKKSGQ-VHIEIRFEKGEHGDGDPFDGPGGTLAHAYFPVYGGDA 207
Query: 151 HLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDL 210
H D AE W +D S +L VA HE GH LGL+HS VK A+M P + L
Sbjct: 208 HFDDAEQWTID-----SFRGTNLFQVAAHEFGHSLGLSHSDVKAALMAPFYRGYQPYFQL 262
Query: 211 ALDDIQGVQALYG 223
DDIQG+QALYG
Sbjct: 263 DDDDIQGIQALYG 275
>gi|29292580|dbj|BAC66372.1| matrix metalloproteinase e [Cynops pyrrhogaster]
Length = 502
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 78 MINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
++NY L ++ A W+S P+ F + D ADI I F +GDH D PFDG
Sbjct: 123 LVNYTPDLQPAEVDKAIASALGVWSSASPLKFSKIDS-GIADIMISFASGDHQDPYPFDG 181
Query: 135 VLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
LAH++ P S G H D ETW++ S A++L VA HE GH LGL+HS
Sbjct: 182 PGKTLAHAYYPGSGIGGDAHFDEDETWSI------SAKAINLFLVAAHEFGHSLGLSHSS 235
Query: 192 VKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
A+MYPT D L DD++G+QALYG
Sbjct: 236 DPSALMYPTYHYADTANYKLPEDDMKGIQALYG 268
>gi|261490798|ref|NP_001159780.1| stromelysin-1 precursor [Sus scrofa]
gi|199652472|gb|ACH91677.1| matrix metallopeptidase 10 [Sus scrofa]
gi|199652494|gb|ACH91678.1| matrix metallopeptidase 10 [Sus scrofa]
Length = 477
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 94/180 (52%), Gaps = 23/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ L+Y ++NY L + I + ++A W V P++F +
Sbjct: 100 FSTFPGLPKWRKN---DLTY-----RIVNYTLDLPRSVIDSTIEKALKIWEEVTPLTFSK 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P G + H D E W D
Sbjct: 152 ISEGE-ADIMITFAVREHGDFSPFDGPGKVLAHAYAPGPGIYGEAHFDDDEQWTKDTS-- 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
V+L VA HE+GH LGL HS A+MYP P + L+ DD+ G+Q+LYG
Sbjct: 209 ----GVNLFLVAAHELGHSLGLFHSTDSNALMYPVYNPLTDLARFRLSQDDVNGIQSLYG 264
>gi|58176639|pdb|1ROS|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
gi|58176640|pdb|1ROS|B Chain B, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
Length = 163
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 2 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 55
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 56 VVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 109
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 110 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 158
>gi|58176944|pdb|1UTT|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-
(1,3-Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl)ethyl-4-
(4-Ethoxy[1,1-Biphenyl]-4-Yl)-4-Oxobutanoic Acid
gi|58176945|pdb|1UTZ|A Chain A, Crystal Structure Of Mmp-12 Complexed To
(2r)-3-({[4-[(Pyri
Din-4-Yl)phenyl]-Thien-2-
Yl}carboxamido)(Phenyl)propanoic Acid
gi|58176946|pdb|1UTZ|B Chain B, Crystal Structure Of Mmp-12 Complexed To
(2r)-3-({[4-[(Pyri
Din-4-Yl)phenyl]-Thien-2-
Yl}carboxamido)(Phenyl)propanoic Acid
Length = 159
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H ++Y + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 2 PVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 55
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 56 VVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 109
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 110 TAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 158
>gi|71060081|emb|CAJ18584.1| Mmp12 [Mus musculus]
Length = 462
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 97 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 150
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW KS +
Sbjct: 151 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 204
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++M PT + + L+ DDI+ +Q+LYG+
Sbjct: 205 LFLVAVHELGHSLGLQHSNNPKSIMDPTYRYLNPNTFRLSADDIRNIQSLYGA 257
>gi|386799505|gb|AFJ38183.1| matrix metalloproteinase [Takifugu rubripes]
Length = 467
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
++Y + P+W H + F + + D+ F A W+ P++FI
Sbjct: 106 ENYSFYAKNPKWENH-----TITFMIDRYTTDMRREDVDKSFTSAMKMWSDAAPLNFIRV 160
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEK 166
++ ADI + F HGD PFDG GVLAH+F P G H D ETW GS
Sbjct: 161 Y-HNPADIVLSFARRTHGDFFPFDGPRGVLAHAFHPGKGIGGDVHFDEDETWTA--GSR- 216
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
L +VA HE+GH LGL+HS AVMYP+ + + + L+ DD G+Q LYG
Sbjct: 217 ---GYSLFAVAAHELGHSLGLSHSKDPSAVMYPSYRSHSRTQSSLSRDDTLGIQKLYG 271
>gi|195056285|ref|XP_001995042.1| GH22855 [Drosophila grimshawi]
gi|193899248|gb|EDV98114.1| GH22855 [Drosophila grimshawi]
Length = 764
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 19 ESPQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENM 78
SP+C + + D TR ++ YVL K W++ L+++F+ +M
Sbjct: 155 RSPRCGVGDNKNSYNFSPDKLRD--HGTRQRR-YVLQGAK--WSK---TDLTWSFANLSM 206
Query: 79 INYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
+ + I+ + RA W + ++F E ADI++ F GDHGDG FDG V
Sbjct: 207 PD---VGKIRKLISRALLVWENHSKLTFREVYSSQ-ADIQVMFVRGDHGDGYKFDGPGLV 262
Query: 139 LAHSFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
LAH+F P G H DA E W D S S + +VA+HE+GH LGL HS + A
Sbjct: 263 LAHAFYPGVGRGGDAHFDADENWDFDVNSSNSE-GTNFLNVALHELGHSLGLGHSSDENA 321
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VM+P + D L DD G+Q LYG+
Sbjct: 322 VMFPWYQNIDVNGKLPDDDRNGIQELYGA 350
>gi|308488618|ref|XP_003106503.1| hypothetical protein CRE_15976 [Caenorhabditis remanei]
gi|308253853|gb|EFO97805.1| hypothetical protein CRE_15976 [Caenorhabditis remanei]
Length = 575
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPF 132
+S E+ + L D++ A+ WA V P+ F E +DI+I F +H D PF
Sbjct: 146 YSIESWSSDLPKDDVRRAIAEAYGVWAKVTPLEFSEVPAGSTSDIKIRFGTRNHNDPWPF 205
Query: 133 DGVLGVLAHSFSPESGKFHLDAAETWAV-DFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
DG GVLAH+ PESG FH D E W D S A DL +VA+HE GH LGL HS
Sbjct: 206 DGEGGVLAHATMPESGMFHFDDDENWTYKDARKIHSNSATDLLAVAIHEGGHTLGLEHSR 265
Query: 192 VKEAVMYP----TLKPRDKKV--DLALDDIQGVQALY 222
+ A+M P T V +L DDI +QA+Y
Sbjct: 266 DENAIMAPFYQKTTDSNGNYVYPNLKSDDISAIQAIY 302
>gi|301610869|ref|XP_002934968.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
tropicalis]
Length = 466
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG P W + L+Y ++NY + ++ ++AF W+ V P++F
Sbjct: 98 NFATFPGNPVWKKK---DLTY-----RILNYTPDMPKDEVDRAIQKAFKVWSDVTPLTFT 149
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
D ADI I F H D PFDG G LAH+F+P + G H D E W
Sbjct: 150 RILD-GVADIDISFAAQVHNDFYPFDGPYGTLAHAFAPGNNIGGDAHFDEDENWT----- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
V +L VA HE GH LGL HS A+MYPT D L DDI G+Q+LYG
Sbjct: 204 -SGSVGFNLFLVAAHEFGHSLGLYHSNDPNALMYPTYHYVDTNTYQLPQDDINGIQSLYG 262
Query: 224 S 224
+
Sbjct: 263 A 263
>gi|213424023|pdb|2K9C|A Chain A, Paramagnetic Shifts In Solid-State Nmr Of Proteins To
Elicit Structural Information
gi|289526480|pdb|2KRJ|A Chain A, High-Resolution Solid-State Nmr Structure Of A 17.6 Kda
Prot
Length = 152
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 86 DIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
D+ ++AF W++V P+ F + + ADI + F G HGD FDG G+LAH+F P
Sbjct: 18 DVDYAIRKAFQVWSNVTPLKFSKINT-GMADILVVFARGAHGDDHAFDGKGGILAHAFGP 76
Query: 146 ES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
S G H D E W G +L AVHEIGH LGL HS +AVM+PT K
Sbjct: 77 GSGIGGDAHFDEDEFWTTHSG------GTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYK 130
Query: 203 PRD-KKVDLALDDIQGVQALYG 223
D L+ DDI+G+Q+LYG
Sbjct: 131 YVDINTFRLSADDIRGIQSLYG 152
>gi|443727613|gb|ELU14292.1| hypothetical protein CAPTEDRAFT_228569 [Capitella teleta]
Length = 581
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 45 ATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
A R +K Y L RW P L++ S+ N + ++K+ +RAF WA +
Sbjct: 117 AKRRRKRYAL--EGSRWAD--PERLTWKLSR--GTNDMSSAELKSEIQRAFDVWAEYSSI 170
Query: 105 SFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFG 163
ET DI + FY G+HGDG PFDG LAH+F P G H D ET+
Sbjct: 171 EASETSSN--PDINVAFYTGNHGDGYPFDGRGTTLAHAFFPRWGGDVHFDDDETF----- 223
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+ S + VA HEIGH LGL HS + ++M + + L DDI+G+Q LY
Sbjct: 224 TRNSYSGTNFFQVAAHEIGHSLGLMHSSDQSSLMAAYYRGYQRNFKLGNDDIRGIQNLY 282
>gi|363741721|ref|XP_417326.3| PREDICTED: matrix metalloproteinase-24 [Gallus gallus]
Length = 991
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 46 TRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVS 105
+R KK Y L K R +H+ +S N + D + ++AF W V P++
Sbjct: 496 SRRKKRYALTGQKWR-QKHI------TYSVHNYTPKVGELDTRRAIRQAFDVWQRVTPLT 548
Query: 106 FIET------DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAE 156
F E +D ADI I F +G HGD PFDG G LAH++ P G H D+ E
Sbjct: 549 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 608
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDI 215
W + + DL VAVHE+GH LGL HS A+M P + + L DD+
Sbjct: 609 PWTLGNSNHDGN---DLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDL 665
Query: 216 QGVQALYG 223
QG+Q +YG
Sbjct: 666 QGIQKIYG 673
>gi|260787545|ref|XP_002588813.1| hypothetical protein BRAFLDRAFT_89756 [Branchiostoma floridae]
gi|229273983|gb|EEN44824.1| hypothetical protein BRAFLDRAFT_89756 [Branchiostoma floridae]
Length = 393
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+Y ++ N+L +++ RAF W ++F D ADI I F GDHGD
Sbjct: 137 LTYRIAQYPGENHLLHSEVDEAIARAFQIWEEATLLTFTAIDTK--ADIEIKFARGDHGD 194
Query: 129 GEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLL 185
PFDG LAH+FSP G H D AE W VD SP+ +L VA+HE GH L
Sbjct: 195 DTPFDGSGHTLAHAFSPGDGIHGDVHFDDAELWTVD-----SPMGTNLFMVALHEFGHSL 249
Query: 186 GLTHSPVKEAVMYPTLKPR-DKKVDLALDDIQGVQALYGS 224
GL HS ++VMYP L D+ +QALYG
Sbjct: 250 GLNHSDNTDSVMYPWYPGYPGSSYKLPTVDVMAIQALYGE 289
>gi|213972541|ref|NP_598214.1| collagenase 3 precursor [Rattus norvegicus]
gi|149020733|gb|EDL78538.1| matrix metallopeptidase 13 [Rattus norvegicus]
Length = 472
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDISHSEVEKAFRKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RIHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 210 -SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>gi|159162422|pdb|1HOV|A Chain A, Solution Structure Of A Catalytic Domain Of Mmp-2
Complexed With Sc-74020
Length = 163
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 90/178 (50%), Gaps = 22/178 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV---FKRAFSKWASVIPVSFIE 108
Y FP KP+W ++ ++Y +I Y D + V F RAF W+ V P+ F
Sbjct: 2 YNFFPRKPKWDKN---QITY-----RIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSR 53
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
D + ADI I F +HGDG PFDG G+LAH+F+P + G H D E W
Sbjct: 54 IHDGE-ADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWT------ 106
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+ L VA HE GH +GL HS A+M P + K L+ DDI+G+Q LYG
Sbjct: 107 NTSANYSLFLVAAHEFGHAMGLEHSQDPGALMAP-IYTYTKNFRLSQDDIKGIQELYG 163
>gi|62202816|gb|AAH93333.1| LOC553390 protein, partial [Danio rerio]
Length = 479
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
F GKPRW + V ++Y ++ L ++ + +AF ++ VIPV F +
Sbjct: 105 FEGKPRWKQSV---VTYRITE--YTTQLSQREVDSTIAKAFQLYSDVIPVDFKQIFS-GT 158
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F G HGD PFDG GVLAH+ SP + G H D E W++ S +
Sbjct: 159 ADIMILFKGGHHGDFYPFDGPNGVLAHANSPGPEQGGDTHFDDDEKWSL------SSHNI 212
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+MYPT + L DD GVQALYG
Sbjct: 213 NLLLVAAHEFGHALGLDHSRDSSALMYPTYRYVSTNGYTLPRDDRLGVQALYG 265
>gi|327269116|ref|XP_003219341.1| PREDICTED: interstitial collagenase-like [Anolis carolinensis]
Length = 465
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 21/180 (11%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+VL G P+W ++ ++Y ++NY +H +D+ ++AF W+ P++F
Sbjct: 97 DFVLTDGNPKWKKN---NITY-----RIVNYTPDMHPSDVDKAIEKAFEVWSKASPLTFK 148
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI + F DHGD PFDG LAH+FSP G H D E W +
Sbjct: 149 RLYD-GIADIMMSFEIRDHGDNSPFDGPNNYLAHAFSPGDNIGGDVHFDEDELW-----T 202
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS A+MY + L DDI G+QA+YG
Sbjct: 203 TKGSRGYNLFLVAAHELGHSLGLFHSTDPGALMYSEYSYTAPNLFQLPQDDINGIQAIYG 262
>gi|116860|sp|P03957.1|MMP3_RAT RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName: Full=PTR1
protein; AltName: Full=Transin-1; Flags: Precursor
gi|57461|emb|CAA26448.1| unnamed protein product [Rattus norvegicus]
Length = 475
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 23/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ +SY ++NY L + + +RA W V P++F
Sbjct: 98 FSTFPGSPKWRKN---HISY-----RIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSR 149
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W D
Sbjct: 150 ISEGE-ADIMISFAVEEHGDFIPFDGPGMVLAHAYAPGPGTNGDAHFDDDERWTDDV--- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 206 ---TGTNLFLVAAHELGHSLGLFHSANAEALMYPVYKSSTDLARFHLSQDDVDGIQSLYG 262
>gi|46560178|gb|AAT00547.1| matrix metalloproteinase 7 [Xenopus laevis]
Length = 252
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 22/178 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG PRW++ L+Y+ ++NY L + +RAF W++V P+ F
Sbjct: 90 EFRQFPGNPRWSK---AQLTYS-----IVNYTPDLRRQVVDDAIQRAFGVWSNVTPLQFT 141
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ + ADI I F HGD PFDG GVLAH++ P G H D E W
Sbjct: 142 KVSSGN-ADIFIRFGARTHGDSNPFDGPSGVLAHAYGPGRGIGGDAHFDEDERWT----- 195
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQAL 221
S +L VA HE GH LGL HS +A+M+PT L+ DDI G+Q++
Sbjct: 196 -SSRAGFNLFLVAAHEFGHSLGLDHSTDPQALMFPTYHYVETTSFRLSQDDINGIQSI 252
>gi|296087732|emb|CBI34988.3| unnamed protein product [Vitis vinifera]
Length = 119
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 125 DHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHL 184
D+ G PFDG G+LAH+F+ G+FH D E W + + A+DL++VA HEIGHL
Sbjct: 10 DNPHGSPFDGPFGILAHAFALTDGRFHFDCEENWVIGAVAH----AMDLQTVATHEIGHL 65
Query: 185 LGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
LGL H+PV+EAVMY + P K L DDI G++ALY +
Sbjct: 66 LGLAHTPVQEAVMYAIISPGSTK-GLNQDDIDGIRALYAA 104
>gi|403262929|ref|XP_003923817.1| PREDICTED: stromelysin-1 [Saimiri boliviensis boliviensis]
Length = 477
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 103 FPGMPKWRK---THLTY-----RIVNYTLDLPKDAVDSAIEKALKVWEEVTPLTFSRLYE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 155 GE-ADIMISFAVREHGDFYPFDGPGKVLAHAYAPGPGINGDAHFDDDEQWT------KDT 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HE+GH LGL HS EA+MYP P + L+ DD+ G+Q+LYG +P
Sbjct: 208 TGTNLFLVAAHELGHTLGLFHSDNTEALMYPVYNPLTDLTRFHLSQDDVNGIQSLYGPHP 267
Query: 227 NFTIGSLV 234
LV
Sbjct: 268 GSPEKPLV 275
>gi|327269114|ref|XP_003219340.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
Length = 507
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 87/177 (49%), Gaps = 18/177 (10%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ F P+W +S +N + DI +RA+ W+ V P++F +
Sbjct: 129 FATFAMSPKWG-----VKDLTYSIQNYTQKMEPADIDDAIERAWKMWSEVTPLTFTRVYN 183
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVA 170
ADIRI F G+HGD PF LAH+FSP G+ H + W D
Sbjct: 184 GS-ADIRISFVTGNHGDIRPFQKGDNQLAHAFSPAFGGEVHFNDDIVWTKDLA------G 236
Query: 171 VDLESVAVHEIGHLLGLTHSPVKEAVM---YPTLKPRDKKVDLALDDIQGVQALYGS 224
++ VA HE GH LGL HS V +A+M YPT P K + L DDI+G+Q+LYG+
Sbjct: 237 INFFIVAAHEFGHSLGLYHSSVLKALMFALYPTTDP--KTLRLHKDDIKGIQSLYGT 291
>gi|341875024|gb|EGT30959.1| hypothetical protein CAEBREN_14371 [Caenorhabditis brenneri]
Length = 579
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPF 132
+S E+ + L D++ A+ W+ V P+ F E +DI+I F +H D PF
Sbjct: 148 YSIESYSSDLPREDVRRAIAEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGTRNHNDPWPF 207
Query: 133 DGVLGVLAHSFSPESGKFHLDAAETWAVDFGSE-KSPVAVDLESVAVHEIGHLLGLTHSP 191
DG GVLAH+ PESG FH D E W S+ S A DL +VA+HE GH LGL HS
Sbjct: 208 DGEGGVLAHATMPESGMFHFDDDENWTYKDASKIHSNSATDLLAVAIHEGGHTLGLEHSR 267
Query: 192 VKEAVMYP----TLKPRDKKV--DLALDDIQGVQALY 222
+ A+M P T V +L DDI +QA+Y
Sbjct: 268 DETAIMAPFYQKTTDSNGNYVYPNLKSDDISAIQAIY 304
>gi|291222645|ref|XP_002731327.1| PREDICTED: GK21871-like [Saccoglossus kowalevskii]
Length = 535
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSP 145
+A AF +W+ V P++F E D ADI I F H DG FDG G LAH++ P
Sbjct: 133 RAAIYEAFKRWSDVTPLTFKEVTS-DEADIYIEFATRIHSDGPLAAFDGPGGTLAHAYFP 191
Query: 146 ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
E G H D E + + S ++L+ A+HE+GH LGL+HS K+AVMYP + +
Sbjct: 192 EHGDMHFDDDE-----YFTRFSKDGINLDGTALHELGHSLGLSHSNNKQAVMYPIYRKYE 246
Query: 206 --KKVDLALDDIQGVQALYGS 224
+ L+ DDI G+QALYG
Sbjct: 247 YYPNLQLSQDDIMGIQALYGQ 267
>gi|321159779|pdb|3LJZ|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With An
Amino-2-Indanol Compound
gi|321159780|pdb|3LJZ|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With An
Amino-2-Indanol Compound
gi|321159781|pdb|3LJZ|C Chain C, Crystal Structure Of Human Mmp-13 Complexed With An
Amino-2-Indanol Compound
gi|321159782|pdb|3LJZ|D Chain D, Crystal Structure Of Human Mmp-13 Complexed With An
Amino-2-Indanol Compound
gi|343197147|pdb|3O2X|A Chain A, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
gi|343197148|pdb|3O2X|B Chain B, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
gi|343197149|pdb|3O2X|C Chain C, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
gi|343197150|pdb|3O2X|D Chain D, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
Length = 164
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETD 110
+FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 3 VFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLH 54
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
D ADI I F +HGD PFDG G+LAH+F P G H D ETW S
Sbjct: 55 D-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------SS 107
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 108 SKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 164
>gi|390354647|ref|XP_003728374.1| PREDICTED: matrix metalloproteinase-9-like [Strongylocentrotus
purpuratus]
Length = 331
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDF-ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
++A + A W V P+S E D + DI I G+HGDG FDG+ G L H+F P
Sbjct: 169 LRATVRSAMEIWMEVTPLSLCEELDPEADVDIIIRHERGEHGDGVAFDGLDGALGHAFLP 228
Query: 146 ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD 205
+G+ HLD E W V E + D SV H+IGH LGL HS V+ ++M+P ++
Sbjct: 229 ATGEIHLDLDEQWTVGRVPENN--GTDYMSVVSHQIGHALGLLHSGVEGSIMFPIYTDKE 286
Query: 206 KKVDLALDDIQGVQALYGS 224
++L+ D+ +Q+LYG+
Sbjct: 287 -NINLSYQDVLSIQSLYGN 304
>gi|157278088|ref|NP_001098144.1| stromelysin-3 precursor [Oryzias latipes]
gi|19071862|dbj|BAB85675.1| stromelysin-3 [Oryzias latipes]
Length = 492
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K + LF G RW + LSY + + ++ +F+ AF W+ V P+ F E
Sbjct: 114 KRFALFGG--RWEK---TDLSYKIMR--FPWQMREEKVRDIFREAFGVWSEVTPLRFREV 166
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEK 166
D ADI I F HGD PFDG G+LAH+F P + G+ H D E W V
Sbjct: 167 TDGK-ADITIDFNRYWHGDNLPFDGPGGILAHAFFPRTHREGEVHFDFDEHWTV-----G 220
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
+ V DL VA HE GH+LGL HS +AVM P + L+ DD +G+Q LYG
Sbjct: 221 NSVGTDLLQVAAHEFGHVLGLQHSQDPDAVMCP-FYSDSYPLQLSDDDKRGIQHLYGPPV 279
Query: 227 NFTIGSLVESDISTNLAVDLR 247
+ +DIS+ L R
Sbjct: 280 HRPPEVTETNDISSELPDACR 300
>gi|11068038|ref|NP_068254.1| PxORF35 peptide [Plutella xylostella granulovirus]
gi|11036830|gb|AAG27333.1|AF270937_35 PxORF35 peptide [Plutella xylostella granulovirus]
Length = 402
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET-----DDYDFADIRIGFY 122
L+++ + + + L+ + + A +RAF W V S T D+ + ADI+I F+
Sbjct: 32 NLTWSLFNDPLPSNLNESTVLATVRRAFDAWQHVSVQSNNLTFHQVNDNNERADIKIRFF 91
Query: 123 NGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
+G H D PFDG V+AH++ PE G+ H D E W VD + + ++L +V VHE+G
Sbjct: 92 SGRHIDAYPFDGEGRVVAHAYYPEKGELHYDLDEHWTVD---DDNKEDINLYAVTVHELG 148
Query: 183 HLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
H+LGL HS VK +VMY + L DDI G +Y NP
Sbjct: 149 HILGLGHSSVKTSVMYSYY---NNMHYLDQDDINGYDQMYVHNP 189
>gi|293597556|ref|NP_598207.2| stromelysin-1 preproprotein [Rattus norvegicus]
gi|149020729|gb|EDL78534.1| rCG31785, isoform CRA_a [Rattus norvegicus]
gi|149020730|gb|EDL78535.1| rCG31785, isoform CRA_a [Rattus norvegicus]
Length = 475
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 23/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ +SY ++NY L + + +RA W V P++F
Sbjct: 98 FSTFPGSPKWRKN---HISY-----RIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSR 149
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W D
Sbjct: 150 ISEGE-ADIMISFAVEEHGDFIPFDGPGMVLAHAYAPGPGINGDAHFDDDERWTDDV--- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 206 ---TGTNLFLVAAHELGHSLGLFHSANAEALMYPVYKSSTDLARFHLSQDDVDGIQSLYG 262
>gi|156365943|ref|XP_001626901.1| predicted protein [Nematostella vectensis]
gi|156213794|gb|EDO34801.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 44 EATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
E +Y + P K W + +L+YAF EN + + + + RAFS W+
Sbjct: 36 EEDEDTSEYAVAPTK--WNK---TSLTYAF--ENYGDDMTSATQENILARAFSMWSDNSN 88
Query: 104 VSFIETDDYDFADIRIGFYNGDHGDG-EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDF 162
++F D ADI+I F G H + PFDG VLAH+F P G H D E DF
Sbjct: 89 LTFTLVSDASNADIKIAFVTGTHSNCIYPFDGQGSVLAHAFFPTDGSLHFDDDE----DF 144
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
++ +L +VAVHEIGH+LG+ HS +VM P D + L DDI V LY
Sbjct: 145 -TDGVATGTNLLAVAVHEIGHILGVGHSSETNSVMNPNYSGYDPNLALHADDINAVSYLY 203
Query: 223 G 223
G
Sbjct: 204 G 204
>gi|156405599|ref|XP_001640819.1| predicted protein [Nematostella vectensis]
gi|156227955|gb|EDO48756.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG---DGE----PFDGVLGVLA 140
+ +F RA W+ V +SF T++ ADI+I F HG DG FDG VLA
Sbjct: 85 RRIFARALQYWSDVSGLSFSPTNNGGSADIKISFGARSHGGPHDGNRCAYAFDGPGKVLA 144
Query: 141 HSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
H+F P +G+ H D ET+ ++ +P +L VA HE GH LGL HS V+ AVMYP
Sbjct: 145 HAFFPSNGRAHFDEDETY-----TDGTPSGTNLMWVATHEFGHALGLEHSDVRNAVMYPY 199
Query: 201 LKPRDKKVDLALDDIQGVQALYG 223
L DDI+G+Q LYG
Sbjct: 200 YTGYVANFRLQDDDIRGIQVLYG 222
>gi|363729353|ref|XP_003640635.1| PREDICTED: collagenase 3 [Gallus gallus]
Length = 471
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP K +W+ L+Y + + L +++ FKRAF W+ V P++F
Sbjct: 103 EYNFFPRKLKWSN---TNLTYRIM--SYTSDLRRAEVERAFKRAFKVWSDVTPLNFTRIR 157
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI I F +HGD PFDG G+LAH+F P G H D ETW+ D
Sbjct: 158 S-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDETWSDD------ 210
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGS-- 224
+L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG+
Sbjct: 211 SRGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVLPDDDVQGIQELYGAGD 270
Query: 225 -NPN 227
+PN
Sbjct: 271 RDPN 274
>gi|326670156|ref|XP_692205.5| PREDICTED: stromelysin-3 [Danio rerio]
Length = 501
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
+K YVLF G RW + L+Y + + ++ +F+ A W+ V P++F E
Sbjct: 104 QKRYVLFGG--RWPK---TDLTYKIQR--FPWQMREDKVRRIFQEALKVWSDVTPLTFTE 156
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSE 165
+ + ADI I F HGD PFDG G+LAH+F P + G H D E+W V G+E
Sbjct: 157 VVNQE-ADIVIDFTRYWHGDNLPFDGPGGILAHAFFPRTHREGDIHFDYDESWTV--GNE 213
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+ DL VA HE GH+LGL HS V A+M P + L+ DD +G+Q LYG
Sbjct: 214 ---LGTDLLQVAAHEFGHVLGLQHSLVPGAIMSPFYS-FSYPLKLSEDDKKGIQYLYG 267
>gi|405975212|gb|EKC39793.1| Matrix metalloproteinase-17 [Crassostrea gigas]
Length = 599
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 33 KLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFK 92
K + +K E KK YVL P K W H +T + EN L +++ V
Sbjct: 136 KPRCGNKDTVEEEGSRKKRYVLAPSK--WN-HKDLT----YRIENYTPDLPWQEVRRVLA 188
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGK 149
AF W+ V ++F E + ADI I F + H DG PFDG +LAH+F P + G
Sbjct: 189 DAFKVWSDVTDLTFTEVM-HTSADIMIKFASKYHKDGYPFDGKGLILAHAFFPGKDKGGD 247
Query: 150 FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD 209
H D E W ++ E VDL VA HE GH LGL+HS +A+MYP +
Sbjct: 248 THFDEDEKWTINSNEE----GVDLFMVAAHEFGHALGLSHSNEPKALMYPWYQGYIPNFQ 303
Query: 210 LALDDIQGVQALYGS 224
L DD G+Q +YG
Sbjct: 304 LPYDDTVGIQVIYGG 318
>gi|449269762|gb|EMC80513.1| Collagenase 3 [Columba livia]
Length = 471
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 93/187 (49%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y FP K +W++ L+Y ++NY L ++ FK+AF W+ V P++F
Sbjct: 103 EYNFFPRKLKWSK---TNLTY-----RIVNYTSDLRRAEVDRAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
ADI I F +HGD PFDG G+LAH+F P G H D E W+ D
Sbjct: 155 RIRS-GIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDEAWSDD--- 210
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 211 ---SRGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVLPDDDVQGIQELYG 267
Query: 224 S---NPN 227
+ +PN
Sbjct: 268 AGDKDPN 274
>gi|29122671|dbj|BAC66058.1| matrix metalloproteinase [Crassostrea gigas]
Length = 599
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 33 KLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFK 92
K + +K E KK YVL P K W H +T + EN L +++ V
Sbjct: 136 KPRCGNKDTVEEEGSRKKRYVLAPSK--WN-HKDLT----YRIENYTPDLPWQEVRRVLA 188
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGK 149
AF W+ V ++F E + ADI I F + H DG PFDG +LAH+F P + G
Sbjct: 189 DAFKVWSDVTDLTFTEVM-HTSADIMIKFASKYHKDGYPFDGKGLILAHAFFPGKDKGGD 247
Query: 150 FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD 209
H D E W ++ E VDL VA HE GH LGL+HS +A+MYP +
Sbjct: 248 THFDEDEKWTINSNEE----GVDLFMVAAHEFGHALGLSHSNEPKALMYPWYQGYIPNFQ 303
Query: 210 LALDDIQGVQALYGS 224
L DD G+Q +YG
Sbjct: 304 LPYDDTVGIQVIYGG 318
>gi|116872|sp|P23097.1|MMP13_RAT RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; AltName:
Full=UMRCASE; Flags: Precursor
gi|203499|gb|AAA72124.1| collagenase, partial [Rattus norvegicus]
Length = 466
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 99 YNVFPRTLKWSQ---TNLTY-----RIVNYTPDISHSEVEKAFRKAFKVWSDVTPLNFTR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 151 IHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETWT------ 203
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG- 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 204 SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGP 263
Query: 224 --SNPN 227
+PN
Sbjct: 264 GDEDPN 269
>gi|126723537|ref|NP_001075506.1| collagenase 3 precursor [Oryctolagus cuniculus]
gi|5921829|sp|O62806.1|MMP13_RABIT RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|3089539|gb|AAC39251.1| collagenase-3 precursor [Oryctolagus cuniculus]
Length = 471
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
>gi|357486249|ref|XP_003613412.1| Matrix metalloproteinase [Medicago truncatula]
gi|355514747|gb|AES96370.1| Matrix metalloproteinase [Medicago truncatula]
Length = 663
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDD 111
+ FP +W L+Y F N I D+ VF+ A ++W++ V +F ET
Sbjct: 154 ISFPKGNQWFPKGTKNLTYGFDPRNKI----PLDMTNVFRTALTQWSNTTRVLNFTETKS 209
Query: 112 YDFADIRIGFYN--GDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
YD A+I+IGFYN D G + G ++ S + +SG LDA + WA+
Sbjct: 210 YDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVKSGFITLDATKYWAL----PTEHR 265
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR-DKKVDLALDDIQGVQALYGS 224
DLE+ A+H+IGHLLGL HS +++MYPT+ P K V + D +Q LY S
Sbjct: 266 GFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLYSS 321
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 29/179 (16%)
Query: 54 LFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDDY 112
LFP +W L+YAF+ + I D+ VF+ AF++W+ V +F ET Y
Sbjct: 480 LFPKLNKWFTEEKEYLTYAFALASQI----PLDMTNVFRNAFTRWSQTTRVLNFSETTSY 535
Query: 113 DFADIRIGFYNGDH-GDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAV---DFGSEKSP 168
D A+I+IGFYN ++ + V+ + SG L A++ W + ++
Sbjct: 536 DDANIKIGFYNINYIDGVDDVVVGDTVIKLGSNVNSGFIRLIASKYWVLPTDNYMWSWQN 595
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
DLE+ A+H + + KEA D+ D Q +Q +Y SN N
Sbjct: 596 GEFDLETAAIH-------IAITTTKEA------------ADITYSDNQAMQQIY-SNAN 634
>gi|355702803|gb|AES02053.1| matrix metallopeptidase 28 [Mustela putorius furo]
Length = 523
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFS 144
++ + AF W++V + F E ADIR+ F+ GDH DG FDG G LAH+F
Sbjct: 155 VRGAVRAAFQLWSNVSALQFWEAPATVPADIRLTFFQGDHNDGLGNAFDGPGGALAHAFL 214
Query: 145 PESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR 204
P G+ H D E W++ + +L V HEIGH LGL HSP A+M P K
Sbjct: 215 PRRGEAHFDRDERWSLTRRRGR-----NLFVVLAHEIGHTLGLPHSPAPRALMAPYYKRL 269
Query: 205 DKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
+ L+ DD+ VQ LYG ++ + + T+
Sbjct: 270 GRDALLSWDDVLAVQGLYGKPQGGSVAIQLPGKLFTDF 307
>gi|156405298|ref|XP_001640669.1| predicted protein [Nematostella vectensis]
gi|156227804|gb|EDO48606.1| predicted protein [Nematostella vectensis]
Length = 456
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 96/201 (47%), Gaps = 36/201 (17%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY--------LHITDIKAVF 91
+ PA+ R KK Y L F K+N + Y L +D + ++
Sbjct: 61 FSPADKARRKKRYQLHG---------------TFWKKNDLTYRIKGYTSDLPKSDQERIY 105
Query: 92 KRAFSKWASVIPVSFIETDDY---DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-- 146
K AF++W V + E D DI I F G HGDG PFDG G LAH+F P
Sbjct: 106 KWAFAQWTGVSKLKIREASPDLPDDKVDILIDFVRGYHGDGYPFDGPGGTLAHAFYPHNN 165
Query: 147 ---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
SG H D E DF + K ++L+ VA+HE GH LG+ HS V ++M+P +
Sbjct: 166 EGISGDAHFDDDE----DFTTGKD-SGINLDWVALHEFGHSLGIDHSEVHGSIMFPWYQG 220
Query: 204 RDKKVDLALDDIQGVQALYGS 224
+K+ L DD+ +Q +YG+
Sbjct: 221 YKQKIQLTWDDVMAIQGIYGT 241
>gi|109108468|ref|XP_001098400.1| PREDICTED: stromelysin-1 isoform 1 [Macaca mulatta]
Length = 477
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L I + ++A W V P++F
Sbjct: 100 FTTFPGIPKWRK---THLTY-----RIVNYTRDLPKDAIDSAIEKAVKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K V+L VA HE+GH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGVNLFLVAAHELGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPNFTIGSLVESD 237
P LV +D
Sbjct: 265 PPPGSPETPLVPTD 278
>gi|390357864|ref|XP_781575.3| PREDICTED: matrix metalloproteinase-16-like [Strongylocentrotus
purpuratus]
Length = 549
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSF--- 143
+ + A W+ V ++F + ADI I F+ DHGDG PFDG VLAH++
Sbjct: 151 VNQIMALALKAWSDVSSLTFAQVAADQPADILIDFFEADHGDGNPFDGPGAVLAHAYFPN 210
Query: 144 -SPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
+P +G H D AET+ ++ P ++L VA HE GH LGL HS + A+M P +
Sbjct: 211 PNPIAGDAHFDDAETY-----TDGIPQGINLFQVAAHEFGHSLGLGHSTIDAALMAPFYQ 265
Query: 203 PRDKKVDLALDDIQGVQALYGSNPN 227
+L DD+ G+QA YG N N
Sbjct: 266 GYVPDFELHPDDVAGIQAHYGQNTN 290
>gi|117663001|gb|ABK55735.1| matrix metalloproteinase [Cucumis sativus]
Length = 134
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ F G +W + + LSY F + NY I IK V RAFSKW+ F D
Sbjct: 9 FTFFEGNLKW-QSSKLHLSYGF----LPNYP-IDAIKPV-SRAFSKWSLNTHFKFSHVAD 61
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAV 171
Y ADI+I F G+HGD PFDGV GVLAH+++P G+ H D + W+V S
Sbjct: 62 YRKADIKISFERGEHGDNAPFDGVGGVLAHAYAPTDGRLHFDGDDAWSVGAISGY----F 117
Query: 172 DLESVAVHEIGHLLGL 187
D+E+VA+HEIGH+LGL
Sbjct: 118 DVETVALHEIGHILGL 133
>gi|50759211|ref|XP_417569.1| PREDICTED: matrix metalloproteinase-23 [Gallus gallus]
Length = 400
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y + PG +W H +T N+IN D + AF W+ V P SF E
Sbjct: 89 YTITPGHLKWD-HFNLTYKILSFPRNLIN---ARDTRKGLAAAFRMWSEVSPFSFREVPR 144
Query: 112 YDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD---F 162
+ +D++IGFY+ +H D FDG G LAH+F P +G+ H D E W + F
Sbjct: 145 HVPSDLKIGFYSINHTDCLESLIHHCFDGTTGELAHAFFPPNGEIHFDDHEYWILGNTRF 204
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+K DL VA HEIGH LGL HS A+M+ KK ++ D++ G+ LY
Sbjct: 205 SWKKGVWLTDLVHVAAHEIGHALGLMHSQNPNALMHINATLTGKKT-ISQDEVWGIHRLY 263
Query: 223 GS 224
G
Sbjct: 264 GC 265
>gi|301773300|ref|XP_002922062.1| PREDICTED: collagenase 3-like [Ailuropoda melanoleuca]
Length = 470
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 102 EYNVFPRTLKWSK---TNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F DHGD PFDG G+LAH+F P G H D ETW
Sbjct: 154 RLHE-GTADIMISFGTKDHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 208 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPEDDVQGIQFLYG 266
Query: 224 ---SNPN 227
+PN
Sbjct: 267 PGDEDPN 273
>gi|73853842|ref|NP_001027506.1| matrix metallopeptidase 13 (collagenase 3) precursor [Xenopus
(Silurana) tropicalis]
gi|67867494|gb|AAH98086.1| hypothetical protein mgc108008 [Xenopus (Silurana) tropicalis]
Length = 261
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 90/180 (50%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
++ FPG+ RWT+ L+Y ++NY L + + + AF W+ V P+ F
Sbjct: 92 EFRQFPGRQRWTK---TQLTY-----RIVNYTPDLPRSMVDEAIRLAFKVWSDVTPLKFT 143
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
ADI I F HGD PFDG GVLAH+F+P S G H D E W
Sbjct: 144 RISSRR-ADIMIQFGARSHGDFIPFDGPNGVLAHAFAPGSGIGGDAHFDEDERWT----- 197
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+ +L VA HE GH LGL HS A+M+P+ + + + L DD+ G+Q++YG
Sbjct: 198 -STSAGFNLFLVAAHEFGHSLGLDHSRDPRALMFPSYRYMNTRNFRLPQDDVNGIQSIYG 256
>gi|444724330|gb|ELW64937.1| Stromelysin-1 [Tupaia chinensis]
Length = 476
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 99 FSTFPGMPKWKK---THLTY-----RIVNYTPDLPRDAVDSAIEKALKIWEEVTPLTFSK 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P G + H D E W
Sbjct: 151 IHEGE-ADIMISFAVREHGDFSPFDGPGQVLAHAYPPGQGIYGDAHFDDDEQWT------ 203
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS EA+MYP K + LA DD+ G+Q+LYG
Sbjct: 204 KDSAGTNLFLVAAHELGHSLGLFHSTNTEALMYPLYKSFTDLAQFRLAQDDVDGIQSLYG 263
Query: 224 SNP 226
P
Sbjct: 264 PPP 266
>gi|348535772|ref|XP_003455372.1| PREDICTED: matrix metalloproteinase-23-like [Oreochromis niloticus]
Length = 388
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 14/184 (7%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K Y L P K +W + +T N++N +D + +AF W+ V P +F E
Sbjct: 75 KRYTLTPEKLKWDK-FKLTYKLLSFPTNLMN---ASDTRRGIAKAFGMWSDVSPFTFREV 130
Query: 110 DDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD-- 161
ADI+IGFY +H D FDG+ G LAH+F P +G+ H D E W +
Sbjct: 131 PADQEADIKIGFYPVNHTDCWQSHLHHCFDGITGELAHAFFPPTGEIHFDDHEYWILGNM 190
Query: 162 -FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQA 220
F +K DL VA HEIGH+LGL HS +A+M+ +K+ + D++ G+
Sbjct: 191 RFSWKKGVWLTDLVHVAAHEIGHVLGLMHSMDPKALMHLNATLTGRKL-ITQDEVWGLHR 249
Query: 221 LYGS 224
LYG
Sbjct: 250 LYGC 253
>gi|348504208|ref|XP_003439654.1| PREDICTED: stromelysin-3-like [Oreochromis niloticus]
Length = 485
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 12/160 (7%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
+++VF+ AF W +V P+ F E + ADI I F HGD PFDG G+LAH++ P+
Sbjct: 137 VRSVFQEAFGVWGAVTPLRFREVTSEN-ADIIIDFNRYWHGDSLPFDGPGGILAHAYFPQ 195
Query: 147 S---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
+ G+ H D E W V + DL VA HE GH+LGL HS +AVM P
Sbjct: 196 TQREGEVHFDYDEHWTVG-----NNAGTDLLQVAAHEFGHVLGLQHSLEPDAVMCP-FYS 249
Query: 204 RDKKVDLALDDIQGVQALYGSNPNFTIGSLVES-DISTNL 242
+ L+ DD +G+Q LYGS P T + E+ +I T L
Sbjct: 250 DSYPLQLSEDDKRGIQYLYGS-PRHTPPVMTETNEIETEL 288
>gi|296216049|ref|XP_002754397.1| PREDICTED: stromelysin-1 [Callithrix jacchus]
Length = 477
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGMPKWRK---THLTY-----RIVNYTLDLPKDAVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + AD+ I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADVMISFAVREHGDFYPFDGPGRVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS EA+MYP P + L+ DD+ G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHELGHTLGLFHSDNTEALMYPVYNPLTDLTRFHLSQDDVNGIQSLYG 264
Query: 224 SNPN 227
+P
Sbjct: 265 PHPG 268
>gi|402895060|ref|XP_003910653.1| PREDICTED: stromelysin-1 [Papio anubis]
Length = 477
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L I + ++A W V P++F
Sbjct: 100 FTTFPGIPKWRK---THLTY-----RIVNYTQDLPEDAIDSAIEKAVKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K ++L VA HE+GH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGINLFLVAAHELGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPNFTIGSLVESD 237
P LV +D
Sbjct: 265 PPPGSPETPLVPTD 278
>gi|351709972|gb|EHB12891.1| Collagenase 3 [Heterocephalus glaber]
Length = 471
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+A W+SV P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKALKVWSSVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D E W
Sbjct: 155 RLHE-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDEYWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -NSSKGYNLFLVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>gi|126352506|ref|NP_001075273.1| collagenase 3 precursor [Equus caballus]
gi|5921828|sp|O18927.1|MMP13_HORSE RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|2641648|gb|AAB86893.1| matrix metalloproteinase 13 [Equus caballus]
Length = 472
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W + M L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWPK---MNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RLYN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 210 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFVLPDDDVQGIQYLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>gi|157278499|ref|NP_001098351.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
gi|13122278|dbj|BAB32880.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
Length = 546
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET------DDYDFADIRIGFYNGD 125
++S N + D + ++AFS W V P+SF E + ADI I F +G
Sbjct: 63 SYSISNYTPKVGQKDTQRAIRQAFSVWQMVTPLSFQEVPYSEIKKEGKEADIMIFFASGF 122
Query: 126 HGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDG G LAH++ P + G H D+ E W + S DL VAVHE+G
Sbjct: 123 HGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTL---GNPSSDGNDLFLVAVHELG 179
Query: 183 HLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
H LGL HS A+M P + D + L LDD+QG+Q +YG
Sbjct: 180 HALGLEHSNDPSAIMAPFYQYMDTRDFQLPLDDLQGIQKIYG 221
>gi|349803603|gb|AEQ17274.1| hypothetical protein [Pipa carvalhoi]
Length = 171
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ FPG+PRWT+ F N L + + AF W+ V P++F
Sbjct: 7 EFRQFPGRPRWTK-----TQLTFRLLNYTPDLPRQVVDEAIQMAFKVWSDVTPLTFSRVP 61
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + HGD PFDG GVLAH+++P + G H D E W +
Sbjct: 62 NGP-ADIIIQFSSRTHGDQSPFDGPSGVLAHAYAPGNGIGGDAHFDEDERWT------NN 114
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS + A+M+P + + + L DD+ G+Q++YG
Sbjct: 115 RAGFNLFLVAAHEFGHSLGLDHSQDQRALMFPNYRFMETRNFRLPEDDVNGIQSIYG 171
>gi|78099010|sp|Q9EPL6.1|MMP1B_MOUSE RecName: Full=Interstitial collagenase B; AltName: Full=Matrix
metalloproteinase-1b; Short=MMP-1b; AltName:
Full=Mcol-B; Flags: Precursor
gi|11877302|emb|CAC18879.1| putative matrix metalloproteinase [Mus musculus]
Length = 463
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 32 FKLKQSDKYDPAEATRHKKD---------YVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
F LK + DP KK Y + PRWT+ +S N YL
Sbjct: 68 FGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTK-----THLTYSILNYTPYL 122
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
++ RAF W+ V P++F + + DI + F+ GDHGD FDG AH+
Sbjct: 123 SKAVVEDAIARAFRVWSDVTPLTFQRVFEEE-GDIVLSFHRGDHGDLYTFDGSKYHFAHA 181
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D + W + +L V HE+GH LGL+HS +EA+M+P
Sbjct: 182 FLPGLGLGGNVHYDLDQKWT------DNNEDFNLFYVTAHELGHSLGLSHSNDEEALMFP 235
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ +K L DDI +QALYG +PN
Sbjct: 236 SYTWSNKDFVLNQDDINRIQALYGPSPN 263
>gi|301176641|ref|NP_001180379.1| matrix metalloproteinase 1 [Nasonia vitripennis]
Length = 555
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLES 175
I I F G+HGDG+PFDG G LAH++ P G H D E W ++ S +L
Sbjct: 175 IEIRFERGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDTEQWTIN-----SFRGTNLFQ 229
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VA HE GH LGL+HS VK A+M P + D L DDIQG+QALYGS
Sbjct: 230 VAAHEFGHSLGLSHSDVKSALMAPFYRGYDPDFLLESDDIQGIQALYGS 278
>gi|260841538|ref|XP_002613969.1| hypothetical protein BRAFLDRAFT_67465 [Branchiostoma floridae]
gi|229299359|gb|EEN69978.1| hypothetical protein BRAFLDRAFT_67465 [Branchiostoma floridae]
Length = 623
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 28 STPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWT-RHVPMTLSYAFSKENMINYLHITD 86
S P+ ++ D + R ++ Y L RWT R + ++ K L TD
Sbjct: 85 SRPRCGVRDMDGTN--SLVRRRRRYALL--GSRWTIRDITYRVTGYTQK------LSQTD 134
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP- 145
I K AF W+ + F + A I + F GDHGD +PFDG G LAH P
Sbjct: 135 IDNDIKIAFDMWSQSANLKFSQVPSDTDAHITMFFAPGDHGDQDPFDGPAGTLAHGLPPI 194
Query: 146 ESGKFHLDAAETWAVDFGSEKS----------------PVAVDLESVAVHEIGHLLGLTH 189
G+ H D ETW V S S ++L VA HE GH LGL H
Sbjct: 195 AGGETHFDDDETWTVRTFSGDSFSVMFIQIYKLSYLYKDAGINLLQVAAHEFGHALGLGH 254
Query: 190 SPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
S V+EA+M P + + L DDIQG+Q LYG
Sbjct: 255 SDVEEALMAPFYRGYKENFQLHDDDIQGIQILYG 288
>gi|328721273|ref|XP_001945941.2| PREDICTED: matrix metalloproteinase-17-like [Acyrthosiphon pisum]
Length = 642
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 45 ATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV 104
A +H+ G+ +W HV +T S + + +++ + ++ +AF WA +
Sbjct: 122 AGQHRTKRYTLQGQ-KW-HHVNLTWSLRTRRLDKVDHGWV---RSDLNKAFQVWAKYSKL 176
Query: 105 SFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVD 161
+F E + + ADI + F G HGDG PFDG VLAH+F P +G+ H D E W V
Sbjct: 177 TFREVNS-ESADILVFFEKGYHGDGYPFDGPGQVLAHAFFPGTGRGGDAHFDEEEEWLV- 234
Query: 162 FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQAL 221
+ S L VAVHE GH LGL+HS ++A+M+P + +L DD G+Q L
Sbjct: 235 -ADKTSKDGTSLFRVAVHEFGHSLGLSHSSAEDALMFPWYQDLKSNFELPNDDRIGIQVL 293
Query: 222 YGSNPNFTIGSL 233
YG+ + G +
Sbjct: 294 YGAKNDKIWGDI 305
>gi|281341736|gb|EFB17320.1| hypothetical protein PANDA_011008 [Ailuropoda melanoleuca]
Length = 437
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 102 EYNVFPRTLKWSK---TNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F DHGD PFDG G+LAH+F P G H D ETW
Sbjct: 154 RLHE-GTADIMISFGTKDHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 208 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPEDDVQGIQFLYG 266
Query: 224 ---SNPN 227
+PN
Sbjct: 267 PGDEDPN 273
>gi|3550075|gb|AAC34604.1| matrix metalloproteinase-13 [Gallus gallus]
Length = 378
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y FP K +W+ L+Y + + L +++ FKRAF W+ V P++F
Sbjct: 10 EYKFFPRKLKWSN---TNLTYRIM--SYTSDLRRAEVERAFKRAFKVWSDVTPLNFTRIR 64
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
ADI I F +HGD PFDG G+LAH+F P G H D ETW+ D
Sbjct: 65 S-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPDYGGDAHFDDDETWSDD------ 117
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYGS-- 224
+L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG+
Sbjct: 118 SRGYNLFLVAAHEFGHSLGLEHSRDPGALMFPIYTYTGKSGFVLPDDDVQGIQELYGAGD 177
Query: 225 -NPN 227
+PN
Sbjct: 178 RDPN 181
>gi|242000886|ref|XP_002435086.1| matrix metalloproteinase, putative [Ixodes scapularis]
gi|215498416|gb|EEC07910.1| matrix metalloproteinase, putative [Ixodes scapularis]
Length = 550
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 69 LSYAFSKENMINYLHITDIKAVFK---RAFSKWASVIPVSFIETDDYDFADIRIGFYNGD 125
LSY SK D AV K RAF WA V P++F +I I F G+
Sbjct: 90 LSYRISKYPR----RFKDRNAVDKEIARAFKMWADVSPLTFTHKKTGP-VNIDIQFVRGE 144
Query: 126 HGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHL 184
HGDG+PF+G G LAH+F P G H D E W + E V+L VA HE GH
Sbjct: 145 HGDGDPFNGPGGTLAHAFFPRYGGDAHFDDEEKWTI---GEHG--GVNLFQVAAHEFGHS 199
Query: 185 LGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
LGL+HS V+ ++M P + + L DDI G+Q+LYG
Sbjct: 200 LGLSHSDVRRSLMAPFYRGYEPGFTLDRDDIDGIQSLYG 238
>gi|126723161|ref|NP_001075749.1| stromelysin-1 preproprotein [Oryctolagus cuniculus]
gi|116859|sp|P28863.1|MMP3_RABIT RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName:
Full=Transin-1; Flags: Precursor
gi|165710|gb|AAA31467.1| metalloproteinase synovial cell activator precursor [Oryctolagus
cuniculus]
Length = 478
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+WT+ L+Y ++NY L + A ++A W V P++F
Sbjct: 101 FSTFPGTPKWTK---THLTY-----RIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSR 152
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 153 KYEGE-ADIMISFGVREHGDFIPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS EA+MYP + L+ DD+ G+Q+LYG
Sbjct: 206 KDTTGTNLFLVAAHELGHSLGLFHSANPEALMYPVYNAFTDLARFRLSQDDVDGIQSLYG 265
Query: 224 SNP 226
P
Sbjct: 266 PAP 268
>gi|322791350|gb|EFZ15837.1| hypothetical protein SINV_05285 [Solenopsis invicta]
Length = 500
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 28 STPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDI 87
+TP+ +K DK PA R K+ Y L + +R L+Y SK L+ ++
Sbjct: 39 ATPRCGVK--DKVGPAADGRSKR-YAL-----QGSRWRTKNLTYKISK--YPTGLNKQEV 88
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP-E 146
AF+ W+ ++F ++ I + F G+HGDG+PFDG G LAH++ P
Sbjct: 89 DKEIANAFNVWSGETDLTFTRKTGHENVHIEVRFEVGEHGDGDPFDGPGGTLAHAYFPVY 148
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK 206
G H D +E W + +S +L VA HE GH LGL+HS VKEA+M P + D
Sbjct: 149 GGDAHFDDSERWTI-----RSYRGTNLFQVAAHEFGHSLGLSHSDVKEALMAPFYRGYDP 203
Query: 207 KVDLALDDIQGVQAL 221
L DD+ +Q
Sbjct: 204 HFTLDQDDVSAIQVC 218
>gi|391330624|ref|XP_003739756.1| PREDICTED: matrix metalloproteinase-16-like [Metaseiulus
occidentalis]
Length = 578
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
K YVL + T+ V L+Y SK + + ++A +AF W+ P++F
Sbjct: 108 KRYVL-----QGTKWVNKDLTYTISKYPR-SVSNKAKVEAELAKAFKVWSDHTPLTFT-L 160
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVD-FGSEKS 167
+I I F G+HGDG+PF G G LAH+F P G H D +E W ++ +G
Sbjct: 161 KKTGRVNIEISFVTGEHGDGDPFSGPGGTLAHAFFPRYGGDIHFDDSEKWTIEEYG---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
++L VA HEIGH LGL+HS ++ A+M P + D L DDI +Q +YG
Sbjct: 217 --GINLFQVAAHEIGHSLGLSHSDIRSALMAPFYRGYDPYAKLDEDDIDAIQKVYG 270
>gi|47207955|emb|CAF90839.1| unnamed protein product [Tetraodon nigroviridis]
Length = 470
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y LFPGKPRWT+ + ++Y ++ L + + +AF ++ VIP++F +
Sbjct: 101 YGLFPGKPRWTKEL---ITYRITR--YTPDLPQSQVDETIAKAFQLYSDVIPLNFKQIYS 155
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAH--SFSPESGKFHLDAAETWAVDFGSEKSPV 169
ADI I F G HGD PFDG GVLAH S E H D ETW +EK
Sbjct: 156 -GTADIMILFQGGSHGDFYPFDGRGGVLAHANSLGREHWMAHFDEDETWT---NNEK--- 208
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALY---GSN 225
V+L VA H IGH LGL HS + A+M+PT K + L DD + VQ+LY +
Sbjct: 209 GVNLLLVAAHVIGHALGLDHSRDRRALMFPTYKHVNTNGYKLPDDDRREVQSLYEEPTED 268
Query: 226 PNFTIGSLVESDISTNLAVD 245
P+ + + + S LA D
Sbjct: 269 PDSDLPNPRKEQCSRELAFD 288
>gi|115385970|ref|NP_114396.3| interstitial collagenase B precursor [Mus musculus]
gi|148692987|gb|EDL24934.1| matrix metallopeptidase 1b (interstitial collagenase) [Mus
musculus]
gi|148921988|gb|AAI46302.1| Matrix metallopeptidase 1b (interstitial collagenase) [synthetic
construct]
gi|151555539|gb|AAI48745.1| Matrix metallopeptidase 1b (interstitial collagenase) [synthetic
construct]
Length = 463
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 32 FKLKQSDKYDPAEATRHKKD---------YVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
F LK + DP KK Y + PRWT+ +S N YL
Sbjct: 68 FGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTK-----THLTYSILNYTPYL 122
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
++ RAF W+ V P++F + + DI + F+ GDHGD FDG AH+
Sbjct: 123 SKAVVEDAIARAFRVWSDVTPLTFQRVFEEE-GDIVLSFHRGDHGDLYTFDGSKYHFAHA 181
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D + W + +L V HE+GH LGL+HS +EA+M+P
Sbjct: 182 FLPGLGLGGNVHYDLDQKWT------DNNEDFNLFYVTAHELGHSLGLSHSNDEEALMFP 235
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ +K L DDI +QALYG +PN
Sbjct: 236 SYTWSNKDFVLNQDDINRIQALYGPSPN 263
>gi|73966944|ref|XP_548256.2| PREDICTED: matrix metalloproteinase-28 [Canis lupus familiaris]
Length = 520
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPQHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATVPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G L H+F P G+ H D E W++ ++ + V L HEIGH LGL HSP
Sbjct: 201 PGGALGHAFLPRRGEAHFDGDERWSLSRRRGRN-LFVGL----AHEIGHTLGLAHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNL 242
A+M P K + L+ DD+ VQ LYG ++ + + T+
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQGLYGKPQGGSVAIQLPGKLFTDF 303
>gi|74199114|dbj|BAE33104.1| unnamed protein product [Mus musculus]
Length = 472
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RIYD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 210 -SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>gi|6678896|ref|NP_032633.1| collagenase 3 preproprotein [Mus musculus]
gi|461764|sp|P33435.1|MMP13_MOUSE RecName: Full=Collagenase 3; AltName: Full=Matrix
metalloproteinase-13; Short=MMP-13; Flags: Precursor
gi|53604|emb|CAA47102.1| procollagenase [Mus musculus]
gi|74144340|dbj|BAE36033.1| unnamed protein product [Mus musculus]
gi|74178022|dbj|BAE29805.1| unnamed protein product [Mus musculus]
gi|74196011|dbj|BAE30561.1| unnamed protein product [Mus musculus]
gi|74204845|dbj|BAE35483.1| unnamed protein product [Mus musculus]
gi|74220177|dbj|BAE31273.1| unnamed protein product [Mus musculus]
gi|74225324|dbj|BAE31593.1| unnamed protein product [Mus musculus]
gi|116138461|gb|AAI25323.1| Matrix metallopeptidase 13 [Mus musculus]
gi|116138812|gb|AAI25321.1| Matrix metallopeptidase 13 [Mus musculus]
gi|148692985|gb|EDL24932.1| matrix metallopeptidase 13 [Mus musculus]
Length = 472
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RIYD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 210 -SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>gi|74151942|dbj|BAE32010.1| unnamed protein product [Mus musculus]
Length = 472
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RIYD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 210 -SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>gi|348503177|ref|XP_003439142.1| PREDICTED: matrix metalloproteinase-19-like [Oreochromis niloticus]
Length = 407
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES 147
+ + AF W+ V P+ F E D ADI+I F+ D PFDG VLAH+ +PES
Sbjct: 68 RVAIQNAFKYWSDVSPLRFRELDR-GRADIKISFHRKDKTCPVPFDGRGRVLAHADAPES 126
Query: 148 GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK 207
G H D E W +E +L VA HEIGH LGL HS A+M P
Sbjct: 127 GIVHFDEDELW-----TEGKSSGSNLRIVAAHEIGHALGLGHSQYYNALMGPVYNGYRSD 181
Query: 208 VDLALDDIQGVQALYG 223
L DDIQG+QALYG
Sbjct: 182 FKLHPDDIQGIQALYG 197
>gi|224079831|ref|XP_002193937.1| PREDICTED: matrix metalloproteinase-23 [Taeniopygia guttata]
Length = 384
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLS-YAFSKENMINYLHITDIKAVFKRAFSKWAS 100
P A R ++ Y + PG+ +W H +T +F + N L D + AF W+
Sbjct: 64 PGPAARSRR-YTITPGRLKWD-HFNLTYKILSFPR----NLLSARDTRRGLAAAFRMWSE 117
Query: 101 VIPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDA 154
V P SF E + +D++IGFY+ +H D FDG G LAH+F P G+ H D
Sbjct: 118 VSPFSFREVPRHLPSDLKIGFYSINHTDCLESLTHHCFDGTTGELAHAFFPPHGEIHFDD 177
Query: 155 AETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA 211
E W + F +K DL VA HEIGH LGL HS A+M+ KK ++
Sbjct: 178 HEYWILGNTRFSWKKGVWLTDLVHVAAHEIGHALGLMHSLNPNALMHINATLTGKK-SIS 236
Query: 212 LDDIQGVQALYGSN 225
D++ G+ LYG
Sbjct: 237 QDEVWGIHRLYGCK 250
>gi|355566993|gb|EHH23372.1| hypothetical protein EGK_06827 [Macaca mulatta]
gi|355752581|gb|EHH56701.1| hypothetical protein EGM_06164 [Macaca fascicularis]
Length = 477
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 23/191 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L I + ++A W V P++F +
Sbjct: 103 FPGIPKWRK---THLTY-----RIVNYTRDLPKDAIDSAIEKAVKVWEEVTPLTFSRLYE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 155 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
V+L VA HE+GH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 208 TGVNLFLVAAHELGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 267
Query: 227 NFTIGSLVESD 237
LV +D
Sbjct: 268 GSPETPLVPTD 278
>gi|449668752|ref|XP_002163814.2| PREDICTED: 50 kDa hatching enzyme-like [Hydra magnipapillata]
Length = 309
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
+ G +WT+ TL+Y+F N L ++ + AF W+ V ++F ET
Sbjct: 84 YNGYSKWTK---TTLTYSF--RNKCEDLSDGAVRQTIREAFKVWSDVTHLAFTETSGK-- 136
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLE 174
DI IG D PFDG VLAH++ P G+ D E W + DL
Sbjct: 137 GDITIG-------DNSPFDGPGRVLAHAYFPPEGRLCFDEGERWVI------KTTGTDLF 183
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+A+HEIGH+LGL HS ++ +MYP+ + L DD + +Q +YG
Sbjct: 184 EIAIHEIGHILGLEHSNIQGTIMYPSYSGYRPNLQLHYDDRRRIQQMYG 232
>gi|327269120|ref|XP_003219343.1| PREDICTED: matrix metalloproteinase-27-like [Anolis carolinensis]
Length = 437
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
YVL P W ++ L+Y ++NY + D+ ++AF W++V P++F
Sbjct: 71 YVL--ASPGWKKN---KLTY-----RIVNYTPDMRQADVATAIQKAFEVWSAVTPLTFRR 120
Query: 109 TDDYDFADIRIGFYNGDHGDG-EPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGS 164
+ ADI I F HG FDG LGVL H+F P + G H D E+W
Sbjct: 121 VHK-ERADITIEFATRVHGRCPRHFDGPLGVLGHAFPPNNPFRGNIHFDEDESWTARLAE 179
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+L VA HEIGH LGL HS A+MYP KP D + L+ DDI+G+QA+YG
Sbjct: 180 ------FNLWLVAAHEIGHALGLAHSDDPRALMYPNYKPIDPEDFLLSQDDIEGIQAIYG 233
Query: 224 SNPN 227
+ N
Sbjct: 234 PSLN 237
>gi|348524749|ref|XP_003449885.1| PREDICTED: collagenase 3-like [Oreochromis niloticus]
Length = 453
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
+W ++ S + EN + + ++ +A WA V P+ F ADI I
Sbjct: 88 KWQKN-----SLTYRIENYTPDMSVAEVDDSIDKALQVWAKVTPLRFTRIYS-GIADIMI 141
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F G HGD PFDG G LAH+F+P + G H D ET+ +S L V
Sbjct: 142 SFGRGAHGDYYPFDGPDGTLAHAFAPSAGIGGDAHFDEDETFTF-----RSNTGYVLFMV 196
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD-LALDDIQGVQALYGSNPN 227
A HE GH LGL+HS A+MYP + L DDI G+Q+LYG NPN
Sbjct: 197 AAHEFGHSLGLSHSEDPGALMYPVYSYSNPDTYVLPQDDINGIQSLYGRNPN 248
>gi|344287829|ref|XP_003415654.1| PREDICTED: collagenase 3 [Loxodonta africana]
Length = 471
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 92/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W+ M L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 104 YNVFPRTLKWSN---MDLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFTR 155
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 LHN-GTADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNFGGDAHFDDDETWT------ 208
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+QALYG
Sbjct: 209 SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKGHFVLPDDDVQGIQALYG 267
>gi|47215736|emb|CAG05747.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 70 SYAFSKENMINYLHITDIKAVF---KRAFSKWASVIPVSFIE------TDDYD-FADIRI 119
S+ FS ++ NY +A + ++AF W SVIP++F E + D +ADI +
Sbjct: 113 SFYFSSASIENYTPKVGKQATYEAIRKAFKVWESVIPLTFREIPYSQIKNKVDRYADIML 172
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F G HGD PFDG G LAH+F P + G H D AE W V G ++ D+ V
Sbjct: 173 SFAEGFHGDSSPFDGEGGFLAHAFFPGNGIGGDTHFDLAEPWTV--GPDQG--GNDVFLV 228
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS 224
AVHE+GH LGL HS A+M P + + L DD +G+QA+YGS
Sbjct: 229 AVHELGHALGLEHSNDPSAIMAPFYQWFETENFQLPDDDRRGIQAIYGS 277
>gi|240269390|gb|ACS52560.1| putative matrix metalloproteinase [Anopheles gambiae]
Length = 210
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + S P+ +K DK TR K+ Y L + +R L+Y SK
Sbjct: 8 ETMQLMSLPRCGVK--DKVGFGSDTRSKR-YAL-----QGSRWKVKDLTYRISK--YPRR 57
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L T + +AF W+ + F I I F +HGDG+PFDG G LAH
Sbjct: 58 LERTAVDKEIAKAFGVWSEYTDLRFTPKKT-GAVHIDIRFEENEHGDGDPFDGPGGTLAH 116
Query: 142 SFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT 200
++ P G H D AE W +D P +L VA HE GH LGL+HS V+ A+M P
Sbjct: 117 AYFPVYGGDAHFDDAEQWTID-----KPRGTNLFQVAAHEFGHSLGLSHSDVRSALMAPF 171
Query: 201 LKPRDKKVDLALDDIQGVQALYGS---NPNFTIGS 232
+ D L DDI G+Q LYG+ NP G+
Sbjct: 172 YRGYDPVFRLDSDDIXGIQTLYGTKTRNPGGGAGA 206
>gi|45552531|ref|NP_995788.1| matrix metalloproteinase 2, isoform B [Drosophila melanogaster]
gi|21665775|emb|CAC81969.1| matrix metalloproteinase 2-MMP [Drosophila melanogaster]
gi|45445620|gb|AAS64885.1| matrix metalloproteinase 2, isoform B [Drosophila melanogaster]
Length = 758
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P+W+R L+++ +M + + ++ + + A WA+ ++F E D ADI+
Sbjct: 142 PKWSR---TDLTWSMVNRSMPD---ASKVERMVQTALDVWANHSKLTFREVYS-DQADIQ 194
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPVAVDLES 175
I F HGDG FDG VLAH+F P G+ H DA ETW D S+ S + +
Sbjct: 195 ILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDS-HGTNFLN 253
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VA+HE+GH LGL HS + +AVM+P + + +L DD G+Q LYG+
Sbjct: 254 VALHELGHSLGLAHSAIPDAVMFPWYQNNEVAGNLPDDDRYGIQQLYGT 302
>gi|395814636|ref|XP_003780851.1| PREDICTED: stromelysin-1 [Otolemur garnettii]
Length = 477
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + +RA W V P++F
Sbjct: 100 FRTFPGMPKWRK---THLTY-----RIVNYTPDLPRDAVDSAIERALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG LAH++ P G + H D E W
Sbjct: 152 VYEGE-ADIMISFAVGEHGDFSPFDGPGKALAHAYPPGPGIYGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS EA+MYP + L+ DD+ G+Q+LYG
Sbjct: 205 KDTRGTNLFLVAAHELGHSLGLFHSANTEALMYPVYNSLTDLARFRLSQDDVDGIQSLYG 264
Query: 224 SNP 226
P
Sbjct: 265 PPP 267
>gi|60677707|gb|AAX33360.1| SD03462p [Drosophila melanogaster]
Length = 758
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P+W+R L+++ +M + + ++ + + A WA+ ++F E D ADI+
Sbjct: 142 PKWSR---TDLTWSMVNRSMPD---ASKVERMVQTALDVWANHSKLTFREVYS-DQADIQ 194
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPVAVDLES 175
I F HGDG FDG VLAH+F P G+ H DA ETW D S+ S + +
Sbjct: 195 ILFARRAHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDS-HGTNFLN 253
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VA+HE+GH LGL HS + +AVM+P + + +L DD G+Q LYG+
Sbjct: 254 VALHELGHSLGLAHSAIPDAVMFPWYQNNEVAGNLPDDDRYGIQQLYGT 302
>gi|195124519|ref|XP_002006740.1| GI21232 [Drosophila mojavensis]
gi|193911808|gb|EDW10675.1| GI21232 [Drosophila mojavensis]
Length = 709
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 48 HKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFI 107
K+ YVL K W + L+++ ++M + I+ + RA W + ++F
Sbjct: 121 RKRRYVLQGAK--WDK---TDLTWSLVNQSMPD---ANKIRTMVSRALRVWETNSKLTFR 172
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGS 164
E D ADI++ F DHGDG FDG VLAH+F P G H DA ETW D GS
Sbjct: 173 EVYS-DQADIQVLFARRDHGDGYKFDGPGQVLAHAFYPGVGRGGDAHFDAEETWEFD-GS 230
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +VA+HE+GH LGL HS AVM+P + + L DD G+Q LYG+
Sbjct: 231 SDDSRGTNFLNVALHELGHSLGLGHSSDSNAVMFPWYQNNEVDGKLPDDDRIGIQELYGA 290
>gi|13122276|dbj|BAB32879.1| membrane type-5 matrix metalloproteinase-variant [Oryzias latipes]
Length = 431
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET------DDYDFADIRIGFYNGD 125
++S N + D + ++AFS W V P+SF E + ADI I F +G
Sbjct: 63 SYSISNYTPKVGQKDTQRAIRQAFSVWQMVTPLSFQEVPYSEIKKEGKEADIMIFFASGF 122
Query: 126 HGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDG G LAH++ P + G H D+ E W + S DL VAVHE+G
Sbjct: 123 HGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTL---GNPSSDGNDLFLVAVHELG 179
Query: 183 HLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
H LGL HS A+M P + D + L LDD+QG+Q +YG
Sbjct: 180 HALGLEHSNDPSAIMAPFYQYMDTRDFQLPLDDLQGIQKIYG 221
>gi|448262550|pdb|4GR8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
In Complex With Selective Phosphinic Inhibitor Rxp470c
Length = 152
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 86 DIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
D+ ++AF W++V P+ F + + ADI + F G HGD FDG G+LAH+F P
Sbjct: 19 DVDYAIRKAFQVWSNVTPLKFSKINT-GMADILVVFARGAHGDDHAFDGKGGILAHAFGP 77
Query: 146 ES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
S G H D E W G +L AVHEIGH LGL HS +AVM+PT K
Sbjct: 78 GSGIGGDAHFDEDEFWTTHSG------GTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYK 131
Query: 203 PRD-KKVDLALDDIQGVQALY 222
D L+ DDI+G+Q+LY
Sbjct: 132 YVDINTFRLSADDIRGIQSLY 152
>gi|449683393|ref|XP_002168659.2| PREDICTED: uncharacterized protein LOC100203385, partial [Hydra
magnipapillata]
Length = 966
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSF--IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVL 139
L ++ V ++A S+W +V ++F IE + + ADI + F H D PFDG GVL
Sbjct: 14 LSRNQVENVIQKAVSRWEAVTNLNFRKIEINSKEVADIEVSFGIRYHRDAYPFDGPGGVL 73
Query: 140 AHSFSPE-----SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
AH F P SG H D E + + + +L VAVHEIGH +GL HS ++E
Sbjct: 74 AHGFYPSTNEGISGDLHFDDDEVFTIG-----TSEGRNLLWVAVHEIGHCIGLEHSNIRE 128
Query: 195 AVMYPTLKP-RDKKVDLALDDIQGVQALYGSNPNFTIGSLVESD---ISTNLAVDLRIKS 250
++MYP K + L DDI G+Q LYGS I V + ++T+ DL
Sbjct: 129 SIMYPWYKGYMGEDFPLTQDDIYGIQTLYGSKKQKHITDQVTTTVLPVATSSGKDLLPTC 188
Query: 251 SM 252
SM
Sbjct: 189 SM 190
>gi|444725647|gb|ELW66208.1| Matrix metalloproteinase-15 [Tupaia chinensis]
Length = 891
Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R +K Y L G+ +WT H FS +N L +RAF W P++F
Sbjct: 359 RRRKRYAL-TGR-KWTNH-----HLTFSIQNYTEKLGWYHSLEAVRRAFRVWEQATPLAF 411
Query: 107 IETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAE 156
E D ADI + F +G HGD PFDG G LAH++ P G H DA E
Sbjct: 412 QEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHFDADE 471
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDI 215
W S L VAVHE+GH LGL HS A+M P + D L DD+
Sbjct: 472 PWTF---SSTDLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDIDNFQLPEDDL 528
Query: 216 QGVQALYGSNPNF 228
+G+Q LYG+ ++
Sbjct: 529 RGIQQLYGATAHY 541
>gi|390357502|ref|XP_003729016.1| PREDICTED: matrix metalloproteinase-16-like isoform 1
[Strongylocentrotus purpuratus]
Length = 511
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + +TP+ +K + + A+ R K+ Y L PRW R +T + ++
Sbjct: 79 ESMELMNTPRCGMKDMESF--ADMMRRKR-YAL---GPRW-RQTDLTWNILEDSDD---- 127
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVL 139
L ++++ RAF W+ V ++F + + DI+I F G+HGDG FDG GVL
Sbjct: 128 LPRAQVESIMARAFKAWSDVSTLTFSKVTTNE-PDIKIIFAAGEHGDGIEARFDGGGGVL 186
Query: 140 AHSFSPES----GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
AH++ P S G H D E + +E + ++L VA HE GH LGL HS +++A
Sbjct: 187 AHAYFPTSNSIGGDAHFDEGERF-----TEGTSTGINLFQVAAHEFGHSLGLRHSDIEDA 241
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYG 223
+M+P + L DDI G+QA YG
Sbjct: 242 LMFPYYRGYVPNFQLHRDDIAGIQAHYG 269
>gi|309752945|gb|ADO85463.1| mp-nase [Pieris rapae granulovirus]
Length = 444
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 57 GKPRWTRHV---------PMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP---- 103
G PR+ R + ++Y+ K + L+IT I + AF W + +
Sbjct: 40 GSPRYKRFLVDQNNYWPDKHNITYSLFKHTIPPTLNITAIANETQSAFELWQNAVSYDKR 99
Query: 104 ---VSFIET-DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWA 159
+ F+ DD ++I+I F G+H D FDG G+LAH+F P G+ H+DA E W
Sbjct: 100 DNILKFVNAGDDNASSNIKIVFAKGNHNDSYNFDGANGILAHAFPPPHGEIHIDADENW- 158
Query: 160 VDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ + + HEIGH +GL+HS V ++MYP K KV L DD G+
Sbjct: 159 LTLQQHNNTNGTSYYNTLTHEIGHAIGLSHSSVNTSIMYPWYKS--GKVRLDADDFNGLD 216
Query: 220 ALYGSNPNFTI 230
LY N F I
Sbjct: 217 QLYVHNDRFKI 227
>gi|15988148|pdb|1JK3|A Chain A, Crystal Structure Of Human Mmp-12 (Macrophage Elastase) At
True Atomic Resolution
Length = 158
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 2 PVWRKHY-----ITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 55
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 56 VVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 109
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVH IGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 110 TAVHAIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 158
>gi|390357500|ref|XP_788786.3| PREDICTED: matrix metalloproteinase-16-like isoform 3
[Strongylocentrotus purpuratus]
Length = 511
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + +TP+ +K + + A+ R K+ Y L PRW R +T + ++
Sbjct: 79 ESMELMNTPRCGMKDMESF--ADMMRRKR-YAL---GPRW-RQTDLTWNILEDSDD---- 127
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVL 139
L ++++ RAF W+ V ++F + + DI+I F G+HGDG FDG GVL
Sbjct: 128 LPRAQVESIMARAFKAWSDVSTLTFSKVTTNE-PDIKIIFAAGEHGDGIEARFDGGGGVL 186
Query: 140 AHSFSPES----GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
AH++ P S G H D E + +E + ++L VA HE GH LGL HS +++A
Sbjct: 187 AHAYFPTSNSIGGDAHFDEGERF-----TEGTSTGINLFQVAAHEFGHSLGLRHSDIEDA 241
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYG 223
+M+P + L DDI G+QA YG
Sbjct: 242 LMFPYYRGYVPNFQLHRDDIAGIQAHYG 269
>gi|125858765|gb|AAI29281.1| Zgc:136396 protein [Danio rerio]
Length = 475
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 32/181 (17%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
F GKPRW + V ++Y ++ L ++ + +AF ++ VIPV F +
Sbjct: 101 FEGKPRWKQSV---VTYRITE--YTTQLSQREVDSTIAKAFQLYSDVIPVDFKQIFS-GT 154
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F G HGD PFDG GVLAH+ SP + G H D E W++ S +
Sbjct: 155 ADIMILFKGGHHGDFYPFDGPNGVLAHANSPGPGQGGDTHFDDDEKWSL------SSQNI 208
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLK---------PRDKKVDLALDDIQGVQALY 222
+L VA HE GH LGL HS A+MYPT + PRD ++ GVQALY
Sbjct: 209 NLLLVAAHEFGHALGLDHSRDSSALMYPTYRYVSTNGYTLPRDVRL--------GVQALY 260
Query: 223 G 223
G
Sbjct: 261 G 261
>gi|390357504|ref|XP_003729017.1| PREDICTED: matrix metalloproteinase-16-like isoform 2
[Strongylocentrotus purpuratus]
Length = 445
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 27/210 (12%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ + + +TP+ +K + + A+ R K+ Y L PRW R +T + ++
Sbjct: 13 ESMELMNTPRCGMKDMESF--ADMMRRKR-YAL---GPRW-RQTDLTWNILEDSDD---- 61
Query: 82 LHITDIKAVFKRAFSKWASVIPVSF--IETDDYDFADIRIGFYNGDHGDG--EPFDGVLG 137
L ++++ RAF W+ V ++F + T++ DI+I F G+HGDG FDG G
Sbjct: 62 LPRAQVESIMARAFKAWSDVSTLTFSKVTTNE---PDIKIIFAAGEHGDGIEARFDGGGG 118
Query: 138 VLAHSFSPES----GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
VLAH++ P S G H D E + +E + ++L VA HE GH LGL HS ++
Sbjct: 119 VLAHAYFPTSNSIGGDAHFDEGERF-----TEGTSTGINLFQVAAHEFGHSLGLRHSDIE 173
Query: 194 EAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+A+M+P + L DDI G+QA YG
Sbjct: 174 DALMFPYYRGYVPNFQLHRDDIAGIQAHYG 203
>gi|383861584|ref|XP_003706265.1| PREDICTED: matrix metalloproteinase-24-like [Megachile rotundata]
Length = 595
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTRHVP-MTLSYAFSKENMINYLHITDIKAVFKRAFS 96
DK DP ++ +K Y + +H P L+++ E L ++ RA
Sbjct: 79 DKPDPRYKSKRRKRYTIH------GQHWPHRNLTWSLRTEQPSG-LDTGGVRFELSRALD 131
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLD 153
WA ++F E + D ADI + F+ HGDG PFDG +LAH+F P + G H D
Sbjct: 132 LWARNSKLTFQEVNS-DRADILVYFHRRYHGDGYPFDGRGQILAHAFFPGKDQGGDAHFD 190
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALD 213
E W + S + L +VA HE GH LGL HS V A+MYP + +L D
Sbjct: 191 EEEIWLLQDDSNEE--GTSLFAVAAHEFGHSLGLAHSSVPGALMYPWYQGLSSNYELPED 248
Query: 214 DIQGVQALYGS 224
D G+Q +YG+
Sbjct: 249 DRHGIQQMYGA 259
>gi|344287823|ref|XP_003415651.1| PREDICTED: stromelysin-2 [Loxodonta africana]
Length = 476
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FP P+W + L+Y ++NY L + A ++A W V P++F
Sbjct: 99 FTTFPSSPKWRK---THLTY-----RIVNYTLDLPRDAVDAAIEKALKVWEEVTPLTFSR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG +AH+++P +G H D E W D
Sbjct: 151 NKEGE-ADIMISFAVREHGDFFPFDGPGATVAHAYAPGPGINGDVHFDDDERWTED---- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP P + L+ DD+ G+Q+LYG
Sbjct: 206 --KTGTNLFLVAAHELGHSLGLFHSANPEALMYPVYNPLTDLARFHLSQDDVNGIQSLYG 263
Query: 224 SNP 226
P
Sbjct: 264 PPP 266
>gi|148235497|ref|NP_001087063.1| stromelysin-1 [Xenopus laevis]
gi|50417744|gb|AAH77966.1| Mmp13-prov protein [Xenopus laevis]
Length = 458
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 29/181 (16%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
F G P+W + T++Y ++NY + +++ +AF W+ V P++F + +
Sbjct: 78 FAGNPKWQK---TTITY-----RILNYTPDITKSEVDYAIAQAFRVWSDVTPLNFQKLNS 129
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
D ADI I F HGD FDG GVLAH+++P G H D E W + P
Sbjct: 130 VD-ADILISFNTKAHGDFNSFDGPNGVLAHAYAPAEGIGGDAHFDEDEQWTL------GP 182
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYP------TLKPRDKKVDLALDDIQGVQALY 222
++ VA HE GH LGL+HS A+M+P T+ P K L+ DDI G+Q LY
Sbjct: 183 QGANIFLVAAHEFGHSLGLSHSNDPNALMFPTASFGMTINPAQYK--LSADDIAGIQTLY 240
Query: 223 G 223
G
Sbjct: 241 G 241
>gi|224510512|pdb|2W0D|A Chain A, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
gi|224510513|pdb|2W0D|B Chain B, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
gi|224510514|pdb|2W0D|C Chain C, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
gi|224510515|pdb|2W0D|D Chain D, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
X-Ray Crystallography Hybrid Approach Provide Reliable
Structural Information Of Ligand-Protein Complexes? A
Case Study Of Metalloproteinases.
gi|436408754|pdb|3UVC|A Chain A, Mmp12 In A Complex With The Dimeric Adduct:
5-(5-Phenylhydantoin)-5- Phenylhydantoin
gi|436408755|pdb|3UVC|B Chain B, Mmp12 In A Complex With The Dimeric Adduct:
5-(5-Phenylhydantoin)-5- Phenylhydantoin
Length = 164
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 16/169 (9%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P W +H + N ++ D+ ++AF W++V P+ F + + ADI
Sbjct: 3 PVWRKHY-----ITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMADIL 56
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLES 175
+ F G HGD FDG G+LAH+F P S G H D E W G +L
Sbjct: 57 VVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTNLFL 110
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
AVH IGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 111 TAVHAIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 159
>gi|291237328|ref|XP_002738587.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 525
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R K Y + K W++ L+Y F + N L +++ RAF WA V P++F
Sbjct: 129 RRSKRYTIQGSK--WSK---TDLTYKFY--SYTNQLTHGQVRSAIYRAFQLWADVSPLTF 181
Query: 107 IETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGS 164
E D ADI I F H DG FDG G LAH++ PE+G H D ET+ V
Sbjct: 182 TEVASGD-ADINIEFARWTHSDGYAASFDGPGGTLAHAYFPENGDAHFDDDETFTV---- 236
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS + A+MYP + L DDI G+Q LYG
Sbjct: 237 -YSDEGTNLFIVAAHEFGHSLGLGHSNTQGALMYPWYQGYVPDYQLPQDDIMGIQYLYG 294
>gi|291221485|ref|XP_002730753.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
preproprotein-like [Saccoglossus kowalevskii]
Length = 397
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPESGKF 150
R+F W+ V P++F E + + ADI I F G H DG FDG G LAH++ PE G
Sbjct: 60 RSFKHWSDVTPLTFTEVSNGE-ADILIEFATGVHSDGPGAAFDGPGGTLAHAYFPEDGDM 118
Query: 151 HLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDL 210
H D E + V+ S ++L+ A HE+GH LGL+HS + A+MYP + L
Sbjct: 119 HFDDDEYFTVN-----SDHGINLDFTATHELGHSLGLSHSGDQNAIMYPFYLGYVPDLQL 173
Query: 211 ALDDIQGVQALYGSN 225
DDI G+Q LYGSN
Sbjct: 174 KQDDIIGIQTLYGSN 188
>gi|166406909|gb|ABY87417.1| matrix metalloproteinase 1 [Haliotis diversicolor]
Length = 205
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPE----SGKFH 151
W V P++F T+ DI + F G+HGDG FDG LAH+F P SG H
Sbjct: 2 WKEVTPLTFKYTEG--TPDIEVKFARGEHGDGAYNAFDGKGKTLAHAFGPGGHPISGDTH 59
Query: 152 LDAAETWAV--DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD 209
D E W D G+E LE+VA HE GH LGL HS V+ ++M P K D +
Sbjct: 60 FDDDEEWTYHEDRGTE-------LETVAAHEFGHALGLGHSSVRGSLMAPYYKGYDPNLK 112
Query: 210 LALDDIQGVQALYGSNPN 227
L DDI+ +Q LYGSNPN
Sbjct: 113 LHSDDIRAIQILYGSNPN 130
>gi|410928765|ref|XP_003977770.1| PREDICTED: matrix metalloproteinase-14-like [Takifugu rubripes]
Length = 630
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASV-------IPVSFIETDDYDFADIRIGFYNGD 125
FS +N + + ++AF W S+ IP S+I +FADI + F G
Sbjct: 123 FSIQNYTPKVGEYETYEAIRKAFKVWESITPLRFREIPYSYIRDRVEEFADIMLFFGEGF 182
Query: 126 HGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDG G LAH++ P + G H DAAE W V + D+ VAVHE+G
Sbjct: 183 HGDSTPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTV---KNRDLTGNDIFLVAVHELG 239
Query: 183 HLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
H LGL HS A+M P + D + +L DD +G+Q LYGS
Sbjct: 240 HALGLEHSNDPSAIMAPFYQWMDTENFELPDDDRRGIQQLYGSG 283
>gi|326674248|ref|XP_002664668.2| PREDICTED: matrix metalloproteinase-20-like [Danio rerio]
Length = 422
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 28/185 (15%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSK-------ENMINYLHITDIKAVFKRAFSKWASVI 102
+++ +PG+P+W ++ ++Y ++ E + N LH+ A W+
Sbjct: 83 ENFSFYPGRPKWKSNI---ITYRIARFTPDLRPEEVENSLHL---------ALKIWSDAA 130
Query: 103 PVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWA 159
P+ F++ + ADI F + HGD PFDG GVLAH+F P G H D E W
Sbjct: 131 PLKFVQIKE-GRADITFSFNSKAHGDFFPFDGPGGVLAHAFEPGEGLGGDVHFDDDEIWT 189
Query: 160 VDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGV 218
V G +L +VA HE+GH LGL+HS A+MYP K + L DD G+
Sbjct: 190 VGRGRP----GYNLFTVAAHELGHSLGLSHSKDPTALMYPKYKFINAATYKLPRDDTLGI 245
Query: 219 QALYG 223
QALYG
Sbjct: 246 QALYG 250
>gi|10120630|pdb|1CXV|A Chain A, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
gi|10120631|pdb|1CXV|B Chain B, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
Length = 164
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 92/179 (51%), Gaps = 22/179 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 1 YNVFPRTLKWSQ---TNLTY-----RIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTR 52
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 53 IYD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT------ 105
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 106 SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYG 164
>gi|288804676|ref|YP_003429361.1| metalloproteinase [Pieris rapae granulovirus]
gi|270161251|gb|ACZ63523.1| metalloproteinase [Pieris rapae granulovirus]
Length = 432
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 57 GKPRWTRHV---------PMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP---- 103
G PR+ R + ++Y+ K + L+IT I + AF W + +
Sbjct: 28 GSPRYKRFLVDQNNYWPDKHNITYSLFKHTIPPTLNITAIANETQSAFELWQNAVSYDKR 87
Query: 104 ---VSFIET-DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWA 159
+ F+ DD ++I+I F G+H D FDG G+LAH+F P G+ H+DA E W
Sbjct: 88 DNILKFVNAGDDNASSNIKIVFAKGNHNDSYNFDGANGILAHAFPPPHGEIHIDADENW- 146
Query: 160 VDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ + + HEIGH +GL+HS V ++MYP K KV L DD G+
Sbjct: 147 LTLQQHNNTNGTSYYNTLTHEIGHAIGLSHSSVNTSIMYPWYKS--GKVRLDADDFNGLD 204
Query: 220 ALYGSNPNFTI 230
LY N F I
Sbjct: 205 QLYVHNDRFKI 215
>gi|291383989|ref|XP_002708607.1| PREDICTED: matrix metalloproteinase 10 [Oryctolagus cuniculus]
Length = 477
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+WT+ L+Y ++NY L + A ++A W V P++F
Sbjct: 100 FSTFPGTPKWTK---THLTY-----RIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG LAH++ P G + H D E W
Sbjct: 152 KHEGE-ADIMISFAVKEHGDFYPFDGPGYSLAHAYPPGPGLYGDVHFDDDEKWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+S +L VA HE+GH LGL HS EA+MYP + L+ DD+ G+Q+LYG
Sbjct: 205 ESASGTNLFLVAAHELGHSLGLLHSANPEALMYPVYNTFTDLARFRLSQDDVDGIQSLYG 264
Query: 224 SNPNFTIGSLVESD 237
P S+V ++
Sbjct: 265 PPPTSPGTSVVPTE 278
>gi|388512697|gb|AFK44410.1| unknown [Medicago truncatula]
Length = 360
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDD 111
+ FP +W L+Y F N I D+ VF+ A ++W++ V +F ET
Sbjct: 154 ISFPKGNQWFPKGTKNLTYGFDPRNKIPL----DMTNVFRTALTQWSNTTRVLNFTETKS 209
Query: 112 YDFADIRIGFYN--GDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
YD A+I+IGFYN D G + G ++ S + +SG LDA + WA+
Sbjct: 210 YDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTNVKSGFITLDATKYWAL----PTEHR 265
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPR-DKKVDLALDDIQGVQALYGS 224
DLE+ A+H+IGHLLGL HS +++MYPT+ P K V + D +Q Y S
Sbjct: 266 GFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKFYSS 321
>gi|426370260|ref|XP_004052086.1| PREDICTED: stromelysin-1 [Gorilla gorilla gorilla]
Length = 477
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAEKEHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPN 227
P+
Sbjct: 265 PPPD 268
>gi|390469639|ref|XP_002754399.2| PREDICTED: collagenase 3 [Callithrix jacchus]
Length = 680
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 93/180 (51%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 312 EYNVFPRTLKWSK---TNLTY-----RIVNYTPDMTHSEVEKAFRKAFKVWSDVTPLNFT 363
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 364 RLHD-GTADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 417
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 418 -SSSKGYNLFLVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYG 476
>gi|198422839|ref|XP_002124617.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
intestinalis]
Length = 684
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
EN + + +RAF WA+ + F +T + A+ +I F G HGD FDG
Sbjct: 264 ENRTPDMTAAQVDDSIQRAFDVWANYTTLRFRQTRNPSEANFKISFGAGSHGDPYAFDGK 323
Query: 136 LGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
G LAH+F P G+ H D AE + G V+L VA HE GH LGL HS V +
Sbjct: 324 GGTLAHAFFPSDGRAHFDEAEHYTYKGGP-----GVNLFIVAAHEFGHALGLGHSSVPNS 378
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALYG 223
+M P + L DDI G+Q LYG
Sbjct: 379 LMAPFYQGYTANFQLHDDDIAGIQQLYG 406
>gi|260820674|ref|XP_002605659.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
gi|229290994|gb|EEN61669.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
Length = 606
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 91/192 (47%), Gaps = 33/192 (17%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITD-------IKAVFKRAF 95
AE TR KK Y L + Y + K+N+ + T + +RAF
Sbjct: 110 AETTR-KKRYAL--------------VGYYWQKKNLTYRIVRTTPQLSPYVVHDAIRRAF 154
Query: 96 SKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHL 152
+ W+ V P++F E + ADI I F G HGDG PFDG LAH+F P G H
Sbjct: 155 NVWSDVTPLTFTEMF-HGEADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGPRRGGDTHF 213
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
D E W + + +L VA HE GH LGL HS +M P + RD + L
Sbjct: 214 DEEEKWTM------TKEGANLFQVATHEFGHALGLGHSSEHNTIMGPFYRYRD-PLQLTE 266
Query: 213 DDIQGVQALYGS 224
DDI+G+Q LYG+
Sbjct: 267 DDIRGIQQLYGA 278
>gi|393911072|gb|EJD76154.1| matrix metalloproteinase-24 [Loa loa]
Length = 550
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P + +K + L P+WT+ + +T S + N + I+ A + W +
Sbjct: 90 PIQGGLRRKRFALM--GPKWTKQI-ITYSVDNPSRTIPN---LGAIRREINEAINSWQHI 143
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETW 158
+P+ F E AD++I F GDHGD FDG +LAH+F P G HLD E W
Sbjct: 144 LPMQFHEIRPESGADVKIRFAIGDHGDPYRFDGSGRILAHAFPPGEGIGGDIHLDDDEHW 203
Query: 159 AVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
V + V L S+ +HE GH +GL+HS +++VMY + D L+ DD+ V
Sbjct: 204 TVTLTGDPFRQQVSLRSIVMHEFGHSIGLSHSHQQDSVMYAFYQ-YDLPPKLSYDDLLAV 262
Query: 219 QALYGSN 225
+ LYG
Sbjct: 263 RTLYGGG 269
>gi|348537610|ref|XP_003456286.1| PREDICTED: matrix metalloproteinase-24 [Oreochromis niloticus]
Length = 624
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET------DDYDFADIRIGFYNGD 125
++S N + D + ++AF+ W +V P+SF E ++ ADI I F +G
Sbjct: 139 SYSISNFTPKVGEKDTQRAIRQAFNVWQAVTPLSFQEVPYSEIKNEGKEADIMIFFASGF 198
Query: 126 HGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDG G LAH++ P + G H D+ E W + + DL VAVHE+G
Sbjct: 199 HGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTLGNANHD---GNDLFLVAVHELG 255
Query: 183 HLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
H LGL HS A+M P + D L LDD+QG+Q +YG
Sbjct: 256 HALGLEHSNDPSAIMAPFYQYMDTHNFKLPLDDLQGIQKIYG 297
>gi|327277063|ref|XP_003223285.1| PREDICTED: matrix metalloproteinase-19-like [Anolis carolinensis]
Length = 475
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 81 YLHITDIKAVFKR-----AFSKWASVIPVSFIETDDYDFADIRIGFYNGD-HGDGEPFDG 134
Y H D+ A R AF W+ V ++F E ADIR+ F+ G PFDG
Sbjct: 119 YSHSEDMGAAATRTAIKTAFKYWSDVTRLTFQEVRT-GRADIRLAFHGSSPWGCSRPFDG 177
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
VLAH+ PE G H D+AE W +E +P V+L +A HEIGH LGL HS
Sbjct: 178 PGHVLAHADIPELGTVHFDSAEHW-----TEGTPRGVNLRIIAAHEIGHALGLGHSRHPT 232
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
A+M P+ + L DDI+G+QALYG
Sbjct: 233 ALMAPSYSGYRPRFRLHHDDIEGIQALYGKK 263
>gi|195381095|ref|XP_002049291.1| GJ20836 [Drosophila virilis]
gi|194144088|gb|EDW60484.1| GJ20836 [Drosophila virilis]
Length = 689
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP- 145
I+ + RA W + ++F E D ADI++ F DHGDG FDG VLAH+F P
Sbjct: 128 IRMMVARALRVWENNSKLTFREVYS-DQADIQVLFARRDHGDGYKFDGPGQVLAHAFYPG 186
Query: 146 --ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H D+ ETW D ++ S + +VA+HE+GH LGL HS V +AVM+P +
Sbjct: 187 VGRGGDAHFDSEETWEFDASNDDS-RGTNFLNVALHELGHSLGLGHSSVSDAVMFPWYQN 245
Query: 204 RDKKVDLALDDIQGVQALYGS 224
+ L DD G+Q LYG+
Sbjct: 246 NEVDGILPDDDRNGIQELYGA 266
>gi|358022773|gb|AEU03839.1| MMPL2 [Branchiostoma belcheri tsingtauense]
Length = 494
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 93 RAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGK 149
RAF WA V P++F ADI I F G HGDG FD GVLAH++ P G
Sbjct: 116 RAFDVWAKVTPLTFRRVSGP--ADIEIRFAAGSHGDGNSFDSRGGVLAHAYQPGGGIGGD 173
Query: 150 FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD 209
H D +E W + + DL SVA HE GH LGL HS V A+M P + +
Sbjct: 174 AHFDESEIWQIGGPTIAFLSGTDLFSVAAHEFGHSLGLGHSQVNSALMAPFYR-YQSTLR 232
Query: 210 LALDDIQGVQALYGS 224
L DDI G+Q+LYG
Sbjct: 233 LDRDDINGIQSLYGG 247
>gi|74138140|dbj|BAE28570.1| unnamed protein product [Mus musculus]
Length = 479
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 23/181 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + ++Y ++NY L + + ++A W V P++F
Sbjct: 102 FSTFPGSPKWRKS---HITY-----RIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSR 153
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG VLAH+++P +G H D E D
Sbjct: 154 ISEGE-ADIMISFAVGEHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERRTEDV--- 209
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 210 ---TGTNLFLVAAHELGHSLGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYG 266
Query: 224 S 224
+
Sbjct: 267 T 267
>gi|7496774|pir||T32166 hypothetical protein C31B8.8 - Caenorhabditis elegans
Length = 598
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPF 132
+S E+ + L D++ A+ W+ V P+ F E +DI+I F +H D PF
Sbjct: 166 YSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDPWPF 225
Query: 133 DGVLGVLAHSFSPESGKFHLDAAETWAV-DFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
DG GVLAH+ PESG FH D E W D + A DL +VA+HE GH LGL HS
Sbjct: 226 DGEGGVLAHATMPESGMFHFDDDENWTYKDARKIHNNEATDLLAVAIHEGGHTLGLEHSR 285
Query: 192 VKEAVMYPTLKPRDKKV------DLALDDIQGVQALY 222
+ A+M P + +L DDI +QA+Y
Sbjct: 286 DENAIMAPFYQKTTDSSGNYVYPNLKSDDISAIQAIY 322
>gi|170030728|ref|XP_001843240.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167867916|gb|EDS31299.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 586
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A + RH++ YV+ G W + ++Y + N + + + ++AF++WA
Sbjct: 120 ASSLRHRR-YVI--GAESWRKR---KITYFIA--NWSSKVGEDSVAKFMQKAFNEWARYS 171
Query: 103 PVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-----SGKFHLDAAET 157
+ F+ D ADI +GF +G HGD PFDG +LAH+F P G H D E
Sbjct: 172 NLRFVRVYD-PSADIIVGFGSGHHGDNYPFDGPGNILAHAFYPYEMASYGGDIHFDEDEN 230
Query: 158 WAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQG 217
W + S + VD SVA+HE+GH LGL HSPV ++M+P K + L DDI
Sbjct: 231 WKEN--STQLADGVDFYSVAIHELGHSLGLAHSPVYSSLMFPYYKGITQGT-LDYDDILA 287
Query: 218 VQALYGSNPNFTIGSLVESDISTN 241
V LY NP T + +D STN
Sbjct: 288 VYKLYIQNPYITDDPPLPTD-STN 310
>gi|47228071|emb|CAF97700.1| unnamed protein product [Tetraodon nigroviridis]
Length = 549
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASV-------IPVSFIETDDYDFADIRIGFYNG 124
FS +N + + ++AF W SV IP S+I +FADI I F G
Sbjct: 91 TFSIQNYTPKVGEYETYEAIRKAFKVWESVTPLRFREIPYSYIRDKVEEFADIMIFFSEG 150
Query: 125 DHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEI 181
HGD PFDG G LAH++ P + G H DAAE W V + + D+ VAVHE+
Sbjct: 151 FHGDSSPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTV---KNRDLLGNDIFLVAVHEL 207
Query: 182 GHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
GH LGL HS A+M P + + + +L DD +G+Q LYG
Sbjct: 208 GHALGLEHSNDHSAIMAPFYQWMETENFELPDDDRRGIQQLYG 250
>gi|157167961|ref|XP_001662924.1| matrix metalloproteinase [Aedes aegypti]
gi|108881541|gb|EAT45766.1| AAEL002982-PA, partial [Aedes aegypti]
Length = 470
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMIN 80
P+ I + S+P+ + D+ ++ RH++ YV+ G W + ++Y + N +
Sbjct: 45 PRTIRLMSSPRCGV--VDQMPHEQSMRHRR-YVI--GSESWRKR---KITYFIA--NWSS 94
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
+ + +RAF++WA + F+ D ADI +GF +G HGD PFDG +LA
Sbjct: 95 KVGEDSVAKFMQRAFNEWAKYSNLKFVRVYDPS-ADIIVGFGSGHHGDNYPFDGPGNILA 153
Query: 141 HSFSPE-----SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEA 195
H+F P G H D E W + S VD SVA+HE+GH LGL HSPV +
Sbjct: 154 HAFYPYEMQSYGGDIHFDEDENWKEN--STHLSDGVDFYSVAIHELGHSLGLAHSPVYSS 211
Query: 196 VMYPTLKPRDKKVDLALDDIQGVQALY 222
+M+P K + L DDI V LY
Sbjct: 212 LMFPYYKGITQGT-LDYDDILAVYKLY 237
>gi|410340131|gb|JAA39012.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
troglodytes]
Length = 477
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 95/191 (49%), Gaps = 23/191 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK--KVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + + L+ DD+ G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYG 264
Query: 224 SNPNFTIGSLV 234
P T LV
Sbjct: 265 PPPASTEEPLV 275
>gi|156408786|ref|XP_001642037.1| predicted protein [Nematostella vectensis]
gi|156229178|gb|EDO49974.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG +W + +L YAF E L T KAV +AF W+ V P F T D A
Sbjct: 62 PGLGKW---LNTSLLYAF--ETYTADLTQTVQKAVIAKAFKMWSDVSPFIFTLTTDKTKA 116
Query: 116 DIRIGFYNGDHGDG-EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLE 174
I+I F HG+ + FDG V+AH++ P G+ H D ET+ ++ +L
Sbjct: 117 HIKILFGTNTHGNCLKAFDGPGKVIAHAYYPSDGRLHFDDDETF-----TDGVNTGTNLL 171
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
++AVHEIGH+LG+ HS K +VMYP + + L +DI + +YG
Sbjct: 172 AIAVHEIGHILGIAHSTDKNSVMYPKYETYKPNLQLHAEDINAIAYIYG 220
>gi|301611320|ref|XP_002935198.1| PREDICTED: matrix metalloproteinase-23-like [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
+K Y + P +W + L+Y + N L+ D + AF W+ V ++F
Sbjct: 61 RKRYTINPLGYKWDH---LNLTYKIVQ--FPNTLNKDDTERALALAFRMWSKVSSLTFQR 115
Query: 109 TDDYDFADIRIGFYNGDHGD--GEP----FDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
+ +D+RIGFY +H D G P FDG+ G LAH+F P G+ H D E W +
Sbjct: 116 VQSHQVSDLRIGFYTFNHSDCWGSPLHPCFDGLNGELAHAFLPPRGEIHFDNHEFWVLGP 175
Query: 162 --FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
F ++ DL VA HEIGH LGL HS A+M+P + + DDI +Q
Sbjct: 176 SRFSWKQGVWYNDLVQVAAHEIGHALGLWHSSNVTALMHPN-ATYTRIRHVTKDDIMAIQ 234
Query: 220 ALYGSNPNFTIGSLVESDISTNLAVDLRIKSS 251
+LYG + + +E S L+ S
Sbjct: 235 SLYGCPSSGSRCYSLEPSGSCGKQCHLKCDSC 266
>gi|260820672|ref|XP_002605658.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
gi|229290993|gb|EEN61668.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
Length = 499
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 91/192 (47%), Gaps = 33/192 (17%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITD-------IKAVFKRAF 95
AE TR KK Y L + Y + K+N+ + T + +RAF
Sbjct: 110 AETTR-KKRYAL--------------VGYYWQKKNLTYRIVRTTPQLSPYVVHDAIRRAF 154
Query: 96 SKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHL 152
+ W+ V P++F E + ADI I F G HGDG PFDG LAH+F P G H
Sbjct: 155 NVWSDVTPLTFTEMF-HGEADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGPRRGGDTHF 213
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
D E W + + +L VA HE GH LGL HS +M P + RD + L
Sbjct: 214 DEEEKWTM------TKEGANLFQVATHEFGHALGLGHSSEHNTIMGPFYRYRD-PLQLTE 266
Query: 213 DDIQGVQALYGS 224
DDI+G+Q LYG+
Sbjct: 267 DDIRGIQQLYGA 278
>gi|449680675|ref|XP_004209646.1| PREDICTED: matrix metalloproteinase-18-like [Hydra magnipapillata]
Length = 251
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 79/144 (54%), Gaps = 11/144 (7%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
I K AF KW +V + F E + ADI+I F +HGD PFDG G LAH+F P
Sbjct: 113 IDKTIKDAFHKWEAVSRLKFTERSN-GIADIKIKFTRSNHGDPYPFDGPGGTLAHAFYPG 171
Query: 147 ----SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
SG H D E + ++ K DL V +HE+GH LGL HS K A+MYP +
Sbjct: 172 THDLSGDIHFDDDELFTLNTMEGK-----DLSWVVLHELGHSLGLEHSHEKGAIMYPWYE 226
Query: 203 PRD-KKVDLALDDIQGVQALYGSN 225
D +++ L DDI+G+Q LYG +
Sbjct: 227 RHDGREIVLHEDDIEGIQFLYGKS 250
>gi|195431910|ref|XP_002063971.1| GK15621 [Drosophila willistoni]
gi|194160056|gb|EDW74957.1| GK15621 [Drosophila willistoni]
Length = 632
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+ YVL P+W + L+++ + M I+ + RA W + ++F E
Sbjct: 82 RRYVL--QGPKWDK---TDLTWSLVNQTMSK---AGQIRQMVTRALRVWENNSKLTFREV 133
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSEK 166
D ADI++ F DHGDG FDG VLAH+F P G H DA ETW D ++
Sbjct: 134 YS-DQADIQVLFARRDHGDGYKFDGPGQVLAHAFYPGVGRGGDAHFDAEETWEFDSTTDD 192
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
S + +VA+HE+GH LGL HS AVM+P + + L DD G+Q LYG+
Sbjct: 193 S-RGTNFLNVALHELGHSLGLGHSSDSNAVMFPWYQNNEVDGKLPDDDRNGIQELYGA 249
>gi|348551548|ref|XP_003461592.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-23-like
[Cavia porcellus]
Length = 527
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y L P + RW H +T N++N D + AF W+ V P SF E
Sbjct: 216 YTLTPSRLRWD-HFNLTYRILSFPRNLLNQ---RDTRRGLAAAFRMWSDVSPFSFREVAP 271
Query: 112 YDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD---F 162
+D+RIGFY +H D FDG G LAH+F P G H D +E W + +
Sbjct: 272 EQPSDLRIGFYPANHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGPTRY 331
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+K DL VA HEIGH LGL HS +A+M+ R KV L+ D++ G+ LY
Sbjct: 332 SWKKGVWLTDLVHVAAHEIGHALGLMHSQHGQALMHLNATLRGWKV-LSQDEMWGLHRLY 390
Query: 223 GS 224
G
Sbjct: 391 GC 392
>gi|221107524|ref|XP_002170324.1| PREDICTED: matrix metalloproteinase-25-like, partial [Hydra
magnipapillata]
Length = 464
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
Query: 86 DIKAVFKRAFSKWASVIPVSFIETD--DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSF 143
+++ + + AF+KW +V + F + D ADI + F G+HGDG PF + AH+F
Sbjct: 101 EVETILENAFAKWEAVANLKFYKLDFTSKAQADIDVKFVRGNHGDGIPFQPWHYIYAHAF 160
Query: 144 SP-----ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
P SG H + + V K V+L VA+HEIGH LGL HS V+ ++MY
Sbjct: 161 FPLNNEGYSGDVHFNDVYNFNV-----KERNGVNLYWVAIHEIGHSLGLYHSSVQNSLMY 215
Query: 199 PTLK-PRDKKVDLALDDIQGVQALYGSNPNFT 229
P K +D + L DDI G+Q LYGS P T
Sbjct: 216 PYYKGTKDLNIQLHEDDILGIQNLYGSKPVLT 247
>gi|260803725|ref|XP_002596740.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
gi|229281999|gb|EEN52752.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
Length = 592
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L +DI+ +RAF+ WA V P++F E Y ADI I F HGD PFDG GVLAH
Sbjct: 164 LSESDIRYAVERAFAVWAEVAPLTFTEVW-YGDADINIDFRRFYHGDNFPFDGAGGVLAH 222
Query: 142 SFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D E W+V G+ VD+ A HE GH LGL HS ++M
Sbjct: 223 AFFPGEGIGGDTHFDEDEPWSVGTGT-----GVDIFVTASHEFGHALGLHHSSFPGSLMS 277
Query: 199 PTLKPRDKKV-DLALDDIQGVQALYG 223
P D L DD QG+Q LYG
Sbjct: 278 PYYNYYDMDTFTLPDDDRQGIQTLYG 303
>gi|281341731|gb|EFB17315.1| hypothetical protein PANDA_011003 [Ailuropoda melanoleuca]
Length = 435
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
YVL PRW H +T + EN L D+ + ++AF W++V P++F + +
Sbjct: 68 YVLTDRTPRW-EHTHLT----YRIENYTPDLPRADVDSAIEQAFRLWSNVSPLTFTKIFE 122
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDHGD PF G LAH+F P G H D + W DF +
Sbjct: 123 GQ-ADIMISFVWGDHGDNSPFGGPANTLAHAFLPGGGIGGDVHFDEEKRWTSDFRN---- 177
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L +A HE+GH LGL H ++M+P+ + V L+ DI +QALYG + N
Sbjct: 178 --FNLYCIAAHEVGHSLGLGHDNDIGSLMFPSYNNY-RDVLLSPRDISAIQALYGPSKN 233
>gi|187606698|emb|CAP19940.1| matrix metallopeptidase 13 [Sparus aurata]
Length = 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 48 HKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFI 107
H ++ F +W ++ S + EN + + ++ ++A WA V P+ F
Sbjct: 94 HIGEFSTFGNGLKWKKN-----SLTYRIENYTPDMSVAEVDDSIEKALQVWAKVTPLRFT 148
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F HGD PFDG G LAH+F+P G H D ET+
Sbjct: 149 RIYS-DTADIMISFGRLSHGDSYPFDGPDGTLAHAFAPAPGLGGDAHFDEDETFTF---- 203
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG 223
+S L VA HE GH LGL+HS A+MYP + L DDI G+Q+LYG
Sbjct: 204 -RSNTGYVLFMVAAHEFGHSLGLSHSDDPGALMYPIYSYHNPDSFALPRDDINGIQSLYG 262
Query: 224 SNPN 227
NP+
Sbjct: 263 PNPD 266
>gi|116874798|emb|CAA77093.2| MtN9 [Medicago truncatula]
Length = 318
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDDYDFADIR 118
+W L+Y F E+ I+ D VF+ AF++W+ V F E YD ADI+
Sbjct: 128 KWFPKGTKELTYGFLPESKIS----IDKVNVFRNAFTRWSQTTRVLKFSEATSYDDADIK 183
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAV 178
IGFYN + E D V V + S L+A++ W DLE+VA+
Sbjct: 184 IGFYNISYNSKEVIDVV--VSDFFINLRSFTIRLEASKVW-------------DLETVAM 228
Query: 179 HEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGSNPN 227
H+IGHLLGL HS E++MYPT+ P KKV + + D Q +Q LY N
Sbjct: 229 HQIGHLLGLDHSSDVESIMYPTIVPLHQKKVQITVSDNQAIQQLYTKQTN 278
>gi|37726919|gb|AAO63003.1| collagenase 4 [Necturus maculosus]
Length = 237
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 62 TRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGF 121
+R V T + + N + +++ + ++AF W+ V + F D +DI I F
Sbjct: 36 SRSVWETTTVTYRILNFTPDMPRANVENLIQKAFKVWSDVTHLKFTRIFD-GISDIEISF 94
Query: 122 YNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAV 178
GDHGD PFDG LAH+F P G H D ETW+ K L ++A
Sbjct: 95 VAGDHGDNSPFDGPGEFLAHAFDPGYGVGGDVHFDEDETWS------KGEDGTVLFNIAA 148
Query: 179 HEIGHLLGLTHSPVKEAVMYP-TLKPRDKKVDLALDDIQGVQALYG--SNPNFTIGSLVE 235
HEIGH LGL HS A+M+P L K L+ DDI G+Q+LYG P G
Sbjct: 149 HEIGHALGLAHSKDPGALMFPFVLNLNIKDFRLSQDDINGIQSLYGLSVKPVQPTGPTTP 208
Query: 236 SDISTNLAVD 245
S NL D
Sbjct: 209 SACDPNLTFD 218
>gi|444724332|gb|ELW64939.1| Stromelysin-1 [Tupaia chinensis]
Length = 384
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+ FPG P+W + L+Y H+ D + +A W V P++F T D
Sbjct: 100 FSTFPGTPKWKK---THLTYRIVSYTPDLPRHVVD--STIDKALKVWKDVTPLTFSRTYD 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG LAH++ P G H D E W D
Sbjct: 155 RE-ADIMISFVVKEHGDFFPFDGPGSSLAHAYPPGPGVEGDVHFDDDEKWTEDMS----- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSN 225
+L VA HE+GH LGL HS EA+MYP K + LA DD+ G+Q+LYG+
Sbjct: 209 -GTNLFLVAAHELGHSLGLFHSTNTEALMYPLYKSFTDLAQFRLAQDDVDGIQSLYGNK 266
>gi|301773290|ref|XP_002922070.1| PREDICTED: interstitial collagenase-like [Ailuropoda melanoleuca]
Length = 469
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 16/179 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
YVL PRW H +T + EN L D+ + ++AF W++V P++F + +
Sbjct: 100 YVLTDRTPRW-EHTHLT----YRIENYTPDLPRADVDSAIEQAFRLWSNVSPLTFTKIFE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDHGD PF G LAH+F P G H D + W DF +
Sbjct: 155 GQ-ADIMISFVWGDHGDNSPFGGPANTLAHAFLPGGGIGGDVHFDEEKRWTSDFRN---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L +A HE+GH LGL H ++M+P+ + V L+ DI +QALYG + N
Sbjct: 210 --FNLYCIAAHEVGHSLGLGHDNDIGSLMFPSYN-NYRDVLLSPRDISAIQALYGPSKN 265
>gi|148668674|gb|EDL00990.1| matrix metallopeptidase 1a (interstitial collagenase) [Mus
musculus]
Length = 421
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N YL ++ RAF W+ V P++F + + DI + F+ GDHGD PFDG
Sbjct: 74 NYTPYLPKAVVEDAIARAFRVWSDVTPLTFQRVFEEE-GDIVLSFHRGDHGDNNPFDGPN 132
Query: 137 GVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
LAH+F P G H D ETW S +L V HE+GH LGLTHS
Sbjct: 133 YKLAHTFQPGPGLGGDVHYDLDETWT------NSSENFNLFYVTAHELGHSLGLTHSSDI 186
Query: 194 EAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
A+M+P+ + L DDI +Q LYG +PN
Sbjct: 187 GALMFPSYTWYTEDFVLNQDDINRIQDLYGPSPN 220
>gi|348540016|ref|XP_003457484.1| PREDICTED: matrix metalloproteinase-14-like [Oreochromis niloticus]
Length = 640
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASV-------IPVSFIETDDYDFADIRIGFYNGD 125
FS +N + + ++AF W V IP S+I +FADI I F G
Sbjct: 123 FSIQNYTPKVGEYETYEAIRKAFKVWEGVTPLRFREIPYSYIRDKVEEFADIMIFFAEGF 182
Query: 126 HGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDG G LAH++ P G H D+AE W V + + D+ VAVHE+G
Sbjct: 183 HGDSSPFDGEGGFLAHAYFPSIGIGGDTHFDSAEPWTV---GNRDLLGNDIFLVAVHELG 239
Query: 183 HLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
H +GL HS A+M P + D + L DD +G+Q LYGS
Sbjct: 240 HAMGLEHSNDPSAIMAPFYQWMDTENFQLPDDDRRGIQQLYGSG 283
>gi|195332885|ref|XP_002033123.1| GM20587 [Drosophila sechellia]
gi|194125093|gb|EDW47136.1| GM20587 [Drosophila sechellia]
Length = 776
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 67 MTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDH 126
M L+++ +M + + ++ + + A WAS ++F E D ADI+I F H
Sbjct: 153 MDLTWSMVNRSMPD---ASKVERMVQSALDVWASHSKLTFREVYS-DQADIQILFARRAH 208
Query: 127 GDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGH 183
GDG FDG VLAH+F P G+ H DA ETW D S+ S + +VA+HE+GH
Sbjct: 209 GDGYKFDGPGQVLAHAFYPSEGRGGDAHFDADETWNFDGESDDS-HGTNFFNVALHELGH 267
Query: 184 LLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
LGL HS + +AVM+P + + L DD G+Q LYG+
Sbjct: 268 SLGLAHSAIPDAVMFPWYQNNEVAGKLPDDDRYGIQQLYGT 308
>gi|17558356|ref|NP_503790.1| Protein C31B8.8 [Caenorhabditis elegans]
gi|3152402|dbj|BAA28351.1| matrix metalloproteinase [Caenorhabditis elegans]
gi|351065134|emb|CCD66298.1| Protein C31B8.8 [Caenorhabditis elegans]
Length = 579
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPF 132
+S E+ + L D++ A+ W+ V P+ F E +DI+I F +H D PF
Sbjct: 147 YSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDPWPF 206
Query: 133 DGVLGVLAHSFSPESGKFHLDAAETWAV-DFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
DG GVLAH+ PESG FH D E W D + A DL +VA+HE GH LGL HS
Sbjct: 207 DGEGGVLAHATMPESGMFHFDDDENWTYKDARKIHNNEATDLLAVAIHEGGHTLGLEHSR 266
Query: 192 VKEAVMYPTLKPRDKKV------DLALDDIQGVQALY 222
+ A+M P + +L DDI +QA+Y
Sbjct: 267 DENAIMAPFYQKTTDSSGNYVYPNLKSDDISAIQAIY 303
>gi|449486132|ref|XP_002187137.2| PREDICTED: matrix metalloproteinase-24 [Taeniopygia guttata]
Length = 548
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 46 TRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVS 105
+R KK Y L K R RH+ +S N + D + ++AF W V P++
Sbjct: 53 SRRKKRYALTGQKWR-QRHI------TYSVHNYTPKVGEIDTRRAIRQAFDVWQRVTPLT 105
Query: 106 FIET------DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAE 156
F E +D ADI I F +G HGD PFDG G LAH++ P G H D+ E
Sbjct: 106 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 165
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDI 215
W + + DL VAVHE+GH LGL HS A+M P + + L DD+
Sbjct: 166 PWTLGNSNHD---GNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDL 222
Query: 216 QGVQALYG 223
QG+Q +YG
Sbjct: 223 QGIQKIYG 230
>gi|410907185|ref|XP_003967072.1| PREDICTED: matrix metalloproteinase-15-like [Takifugu rubripes]
Length = 662
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 23 CIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
IA P+ L + + +R K+ YVL R R ++Y+ + + L
Sbjct: 107 TIAAMRRPRCGLPDVTPLEVEQDSRRKR-YVL-----RGQRWDEDHITYSVLTQQIPTSL 160
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIE------TDDYDFADIRIGFYNGDHGDGEPFDGVL 136
+RA W V P+SF E ++ ADI + F +G HGD FDG
Sbjct: 161 GEQRTSDTIRRALDMWERVTPLSFKELPAVSRSNQSALADIMLLFASGFHGDMSLFDGEG 220
Query: 137 GVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
G LAH+F P G H DA E W +D + VDL VAVHE+GH LGL HS
Sbjct: 221 GSLAHAFYPGPGIGGDVHFDADERWTLD---SQGQTGVDLFLVAVHELGHALGLEHSDNP 277
Query: 194 EAVMYPTLK-PRDKKVDLALDDIQGVQALYGSNP 226
A+M P + L DDIQGVQ++YG P
Sbjct: 278 AAIMAPLYQWMHTHDFTLHPDDIQGVQSIYGEAP 311
>gi|322789997|gb|EFZ15073.1| hypothetical protein SINV_02809 [Solenopsis invicta]
Length = 158
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L ++ +A + WA ++F E + D ADI + F+ G HGDG PFDG +LAH
Sbjct: 9 LDTGGVRLQLSKALNLWARNSRLTFQEINS-DRADILVYFHRGYHGDGYPFDGRGQILAH 67
Query: 142 SFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D E W ++ E + L +VA HE GH LGL HS V+ A+MY
Sbjct: 68 AFFPGKDRGGDAHFDEEEIWLLE--DESNEEGTSLFAVAAHEFGHSLGLAHSSVQGALMY 125
Query: 199 PTLKPRDKKVDLALDDIQGVQALYGSN 225
P + +L DD G+Q +YG +
Sbjct: 126 PWYQGLSANYELPEDDRHGIQQMYGKS 152
>gi|47216487|emb|CAG02138.1| unnamed protein product [Tetraodon nigroviridis]
Length = 339
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 96/207 (46%), Gaps = 38/207 (18%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE- 108
K YV+ P +WT H ++Y K N L++ D + AF+KW+ V P++F E
Sbjct: 5 KRYVINPLGHKWTHH---NITYRILK--FPNTLNVDDTRKAISIAFTKWSDVSPLTFTEV 59
Query: 109 TDDYDFADIRIG----------------------FYNGDHGDG------EPFDGVLGVLA 140
TD ADI IG FY +H D FDG+ G LA
Sbjct: 60 TDGNTTADIAIGRRSPSQSATDGCPVPVCVCVSGFYTYNHTDCWWSPLHPCFDGLNGELA 119
Query: 141 HSFSPESGKFHLDAAETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVM 197
H+F P G+ H D E W + F ++ DL VA HEIGH LGL HS A+M
Sbjct: 120 HAFLPPRGEIHFDNHEFWILGRSRFSWKQGVWLNDLVQVAAHEIGHALGLWHSRDPTALM 179
Query: 198 YPTLKPRDKKVDLALDDIQGVQALYGS 224
+P ++ +A DD+ G+Q LYG
Sbjct: 180 HPNATNTGQR-SVAQDDVWGIQRLYGC 205
>gi|410340133|gb|JAA39013.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
troglodytes]
Length = 477
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 103 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 155 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 208 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 267
Query: 227 N 227
+
Sbjct: 268 D 268
>gi|410340137|gb|JAA39015.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
troglodytes]
Length = 476
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 99 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 151 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 203
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 204 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 263
Query: 224 SNPN 227
P+
Sbjct: 264 PPPD 267
>gi|332208030|ref|XP_003253099.1| PREDICTED: stromelysin-1 [Nomascus leucogenys]
Length = 477
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPN 227
P+
Sbjct: 265 PPPD 268
>gi|47202237|emb|CAF87535.1| unnamed protein product [Tetraodon nigroviridis]
Length = 279
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 70 SYAFSKENMINYLHITDIKAVF---KRAFSKWASVIPVSFIE------TDDYD-FADIRI 119
S+ FS ++ NY +A + ++AF W SVIP++F E + D +ADI +
Sbjct: 113 SFYFSSASIENYTPKVGKQATYEAIRKAFKVWESVIPLTFREIPYSQIKNKVDRYADIML 172
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESV 176
F G HGD PFDG G LAH+F P + G H D AE W V G ++ D+ V
Sbjct: 173 SFAEGFHGDSSPFDGEGGFLAHAFFPGNGIGGDTHFDLAEPWTV--GPDQG--GNDVFLV 228
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS 224
AVHE+GH LGL HS A+M P + + L DD +G+QA+YG
Sbjct: 229 AVHELGHALGLEHSNDPSAIMAPFYQWFETENFQLPDDDRRGIQAIYGG 277
>gi|348574157|ref|XP_003472857.1| PREDICTED: stromelysin-1 [Cavia porcellus]
Length = 477
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ L+Y ++NY L ++ + ++A WA V P++F
Sbjct: 100 FTQFPGMPKWRKN---DLTY-----RVVNYTQDLSRDEVDSAIEKALKVWAEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D + ADI I F +HGD PFDG VL H+++P +G H D E W
Sbjct: 152 IYDGE-ADIMISFAFREHGDYIPFDGPGNVLGHAYAPGPGINGDAHFDDDELWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS +A+MYP + L+ DD+ G+Q LYG
Sbjct: 205 KDTTGTNLFLVAAHELGHSLGLFHSADPKALMYPLYNSFTDLARFRLSQDDVNGIQFLYG 264
Query: 224 SNP 226
P
Sbjct: 265 PPP 267
>gi|194756436|ref|XP_001960484.1| GF11488 [Drosophila ananassae]
gi|190621782|gb|EDV37306.1| GF11488 [Drosophila ananassae]
Length = 756
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P+W++ L+++ M I+ + RA + W + ++F E D ADI+
Sbjct: 160 PKWSK---TDLTWSLVNRTMP---EAEKIRRLVGRALAVWENNSKLTFREVYS-DQADIQ 212
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPVAVDLES 175
I F HGDG FDG VLAH+F P G+ H DA ETW D G+ + +
Sbjct: 213 ILFARLQHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFD-GNADDSHGTNFLN 271
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VA+HE+GH LGL HS + AVM+P + + L DD G+Q LYGS
Sbjct: 272 VALHELGHSLGLGHSSDQNAVMFPWYQNNEVDGKLPDDDRNGIQELYGS 320
>gi|188619|gb|AAA36321.1| matrix metalloproteinase-3 [Homo sapiens]
gi|260509|gb|AAA00036.1| prostromelysin=matrix metalloproteinase [human, Peptide, 477 aa]
gi|1688259|gb|AAB36942.1| stromelysin [Homo sapiens]
gi|46854935|gb|AAH69676.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|46854939|gb|AAH69716.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|50960755|gb|AAH74869.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|62898127|dbj|BAD97003.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
gi|62898143|dbj|BAD97011.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
gi|76780106|gb|AAI05955.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|77567902|gb|AAI07491.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|312150808|gb|ADQ31916.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [synthetic
construct]
Length = 477
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPN 227
P+
Sbjct: 265 PPPD 268
>gi|357486211|ref|XP_003613393.1| Matrix metalloproteinase-14 [Medicago truncatula]
gi|355514728|gb|AES96351.1| Matrix metalloproteinase-14 [Medicago truncatula]
Length = 1024
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDDYDFADIR 118
+W L+Y F E+ I+ D VF+ AF++W+ V F E YD ADI+
Sbjct: 126 KWFPKGTKELTYGFLPESKIS----IDKVNVFRNAFTRWSQTTRVLKFSEATSYDDADIK 181
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAV 178
IGFYN + E D V V + S L+A++ W DLE+VA+
Sbjct: 182 IGFYNISYNSKEVIDVV--VSDFFINLRSFTIRLEASKVW-------------DLETVAM 226
Query: 179 HEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGSNPN 227
H+IGHLLGL HS E++MYPT+ P KKV + + D Q +Q LY N
Sbjct: 227 HQIGHLLGLDHSSDVESIMYPTIVPLHQKKVQITVSDNQAIQQLYTKQTN 276
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 25/181 (13%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDDYDF 114
P +W L+Y F E+ I+ TD+ VF+ AF++W+ V +F ET YD
Sbjct: 507 PKGNKWFPKGTKKLTYGFHPESQIS----TDMIKVFRNAFTRWSQTTRVLNFSETTSYDD 562
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGV---LAHSFSPESGKFHLDAAETWAVDFGSEKSPVA- 170
ADI+IGFYN + D V L +SG LDA++ W + P
Sbjct: 563 ADIKIGFYNITYNDAVDDVVVGDSFISLKLDSKAKSGLIRLDASKYWVL-------PTTY 615
Query: 171 --------VDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQAL 221
DLE+VA+H+IGHLLGL HS +E++MYPT+ P + +KV + + D +Q L
Sbjct: 616 FWYWEFHQFDLETVAMHQIGHLLGLDHSSDEESIMYPTIVPLQQRKVQITVSDNLAIQQL 675
Query: 222 Y 222
Y
Sbjct: 676 Y 676
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 20/190 (10%)
Query: 48 HKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SF 106
H V FP +W L+Y F +N I DI VF+ AF++W+ V +F
Sbjct: 816 HDGSNVSFPKGNKWFPKGTKKLTYGFLPDNRIP----IDIIKVFRNAFTRWSQTTRVLNF 871
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGV---LAHSFSPESGKFHLDAAETWAV--- 160
ET Y+ A+I+IGFYN ++ D V L + +SG L+ +++W +
Sbjct: 872 SETTSYEDAEIKIGFYNINYNDAVDDVVVSDSFISLKLDSNVKSGMLRLNGSKSWVLPTY 931
Query: 161 ----DFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDI 215
D+ ++ DL + +H+IGHLLGL HS KE++MYPT+ P + +KV + D
Sbjct: 932 TKFWDWQFQQ----FDLLTAVMHQIGHLLGLDHSSDKESIMYPTILPWQQRKVQITESDN 987
Query: 216 QGVQALYGSN 225
+Q LY S+
Sbjct: 988 LAIQQLYSSS 997
>gi|4505217|ref|NP_002413.1| stromelysin-1 preproprotein [Homo sapiens]
gi|116857|sp|P08254.2|MMP3_HUMAN RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; AltName:
Full=Transin-1; Flags: Precursor
gi|15294140|gb|AAK95247.1|AF405705_1 matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|36633|emb|CAA28859.1| preprostromelysin [Homo sapiens]
gi|50960572|gb|AAH74815.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|77567646|gb|AAI07492.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
gi|119587436|gb|EAW67032.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
sapiens]
gi|189053854|dbj|BAG36115.1| unnamed protein product [Homo sapiens]
Length = 477
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPN 227
P+
Sbjct: 265 PPPD 268
>gi|114640107|ref|XP_508723.2| PREDICTED: stromelysin-1 isoform 4 [Pan troglodytes]
gi|397516414|ref|XP_003828425.1| PREDICTED: stromelysin-1 [Pan paniscus]
gi|410213336|gb|JAA03887.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
troglodytes]
gi|410340129|gb|JAA39011.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
troglodytes]
Length = 477
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPN 227
P+
Sbjct: 265 PPPD 268
>gi|327269118|ref|XP_003219342.1| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase-like [Anolis
carolinensis]
Length = 466
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L G P+W ++ + + N +H +D+ ++AF W+ P++F D
Sbjct: 98 FLLTDGNPKWKKN-----NITYRIVNFTPDMHPSDVDKAIEKAFEVWSKASPLTFKRLYD 152
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI + F GDH D PFDG GVLAH+F P G H +F +
Sbjct: 153 -GIADIMMSFQIGDHRDNSPFDGPNGVLAHAFQPGDNIGGDVHFGX----XCNFRPSEIH 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNPN 227
L VA HE+GH LGL+HS A+MYPT + L DDI G+QA+YG N
Sbjct: 208 ECYSLFLVAAHELGHSLGLSHSNDPGALMYPTYSYTAPNLFRLPQDDINGIQAIYGKANN 267
Query: 228 FTIGSLVESDISTNLAVDLRIKSSMWATM 256
+ + +T A D R AT+
Sbjct: 268 ----QVQPTGPTTPTACDPRTTFDAVATL 292
>gi|21465442|pdb|1GKC|A Chain A, Mmp9-inhibitor Complex
gi|21465443|pdb|1GKC|B Chain B, Mmp9-inhibitor Complex
Length = 163
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
F G +W H + + +N L I F RAF+ W++V P++F D
Sbjct: 5 FEGDLKWHHH-----NITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRD- 58
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F +HGDG PFDG G+LAH+F P G H D E W++ G S
Sbjct: 59 ADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGQGYS---- 114
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
L VA HE GH LGL HS V EA+MYP + + L DD+ G++ LY
Sbjct: 115 -LFLVAAHEFGHALGLDHSSVPEALMYPMYRFTEGPP-LHKDDVNGIRHLY 163
>gi|350398989|ref|XP_003485375.1| PREDICTED: matrix metalloproteinase-15-like [Bombus impatiens]
Length = 645
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L ++ RA WA ++F E + D ADI + F++G HGDG PFDG +LAH
Sbjct: 131 LDTGGVRFELSRALDLWARNSKLTFQEVNS-DRADILVYFHSGHHGDGYPFDGRGQILAH 189
Query: 142 SFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D E W + + L +VA HE GH LGL HS V A+MY
Sbjct: 190 AFFPGRDRGGDVHFDEEEIWLLQ-DDNSNEEGTSLFAVAAHEFGHSLGLAHSSVSGALMY 248
Query: 199 PTLKPRDKKVDLALDDIQGVQALYGS 224
P + +L DD G+Q +YG+
Sbjct: 249 PWYQGLSSNYELPEDDRHGIQQMYGA 274
>gi|126723289|ref|NP_001075964.1| stromelysin-1 precursor [Equus caballus]
gi|7387585|sp|Q28397.1|MMP3_HORSE RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
metalloproteinase-3; Short=MMP-3; Flags: Precursor
gi|1480746|gb|AAB05774.1| matrix metalloproteinase 3 [Equus caballus]
Length = 477
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV---FKRAFSKWASVIPVSFIE 108
+ FPG P+W++ L+Y ++NY AV ++A W V P++F
Sbjct: 100 FTTFPGMPKWSK---THLTY-----RIVNYTQDLPRDAVDSDVEKALKIWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P +G H D E W
Sbjct: 152 IYEGE-ADIMITFAVREHGDFFPFDGPGKVLAHAYPPGPGMNGDAHFDDDEHWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP---TLKPRDKKVDLALDDIQGVQALY 222
K ++ VA HE+GH LGL HS EA+MYP TLK +V L+ DD+ G+Q+LY
Sbjct: 205 KDASGINFLLVAAHELGHSLGLYHSTNTEALMYPLYNTLK-GPARVRLSQDDVTGIQSLY 263
Query: 223 GSNP 226
G P
Sbjct: 264 GPPP 267
>gi|431922665|gb|ELK19585.1| Matrix metalloproteinase-23 [Pteropus alecto]
Length = 371
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
++ Y L P + RW H +T N+++ ++ + AF W+ V P SF E
Sbjct: 57 RRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PSETRRGLAAAFRMWSDVSPFSFRE 112
Query: 109 TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
+D+RIGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 113 VAPEQTSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGP 172
Query: 162 --FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ +K DL VA HEIGH LGL HS +A+M+ R K L+ D++ G+
Sbjct: 173 TRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGQALMHLNATLRGWKA-LSQDELWGLH 231
Query: 220 ALYGS 224
LYG
Sbjct: 232 RLYGC 236
>gi|332027325|gb|EGI67409.1| Matrix metalloproteinase-25 [Acromyrmex echinatior]
Length = 183
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L ++ +A WA ++F E + D ADI + F+ G HGDG PFDG +LAH
Sbjct: 34 LDTGGVRLELSKALDLWARNSKLTFQEINS-DHADILVYFHRGYHGDGYPFDGRGQILAH 92
Query: 142 SFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D E W ++ E + L +VA HE GH LGL HS V+ A+MY
Sbjct: 93 AFFPGKDRGGDAHFDEEEIWLLE--DESNEEGTSLFAVAAHEFGHSLGLAHSSVQGALMY 150
Query: 199 PTLKPRDKKVDLALDDIQGVQALYG 223
P + +L DD G+Q +YG
Sbjct: 151 PWYQGLSPNYELPEDDRHGIQQMYG 175
>gi|328783162|ref|XP_001120736.2| PREDICTED: matrix metalloproteinase-25-like [Apis mellifera]
Length = 419
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP- 145
++ RA WA ++F E + D ADI + F+ G HGDG PFDG +LAH+F P
Sbjct: 136 VRFELSRALDLWARNSKLTFQEVNS-DRADILVYFHRGYHGDGYPFDGRGQILAHAFFPG 194
Query: 146 --ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H D E W + + + L +VA HE GH LGL HS V A+MYP +
Sbjct: 195 RDRGGDVHFDEEEIWLLQ--GDNNEEGTSLFAVAAHEFGHSLGLAHSSVPGALMYPWYQG 252
Query: 204 RDKKVDLALDDIQGVQALYGS 224
+L DD G+Q +YG+
Sbjct: 253 LSSNYELPEDDRHGIQQMYGA 273
>gi|348573593|ref|XP_003472575.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
[Cavia porcellus]
Length = 472
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ PG P W L+Y ++NY L + ++ F++AF W+ V ++F
Sbjct: 100 FTTMPGNPVWEMK---NLTY-----RIVNYTPLLPKSVVEKAFRKAFQIWSEVSALTFTR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ ADI I F G+HGD PFDG LAH+F P G H D ETW + E
Sbjct: 152 ISQGE-ADIMITFIRGEHGDNNPFDGPGNKLAHAFGPGPRLGGDVHFDLDETWTNESWIE 210
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
+L A HE GH LGL HS ++MYP + +V L DD+ G+Q LYG N
Sbjct: 211 DFS-KFNLYYSAAHEFGHSLGLGHSSDIASLMYPIYQ-YSGQVLLGQDDVDGIQELYGKN 268
>gi|155369235|ref|NP_001094401.1| matrix metallopeptidase 13 (collagenase 3) precursor [Xenopus
laevis]
gi|1223974|gb|AAC59870.1| collagenase-3 [Xenopus laevis]
Length = 472
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 89/180 (49%), Gaps = 22/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y FP K +W R+ L+Y ++NY L +D+ K+A W+ V P++F
Sbjct: 105 YNFFPRKLKWPRN---NLTY-----RIVNYTPDLSTSDVDRAIKKALKVWSDVTPLNFTR 156
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
ADI + F +HGD PFDG G+LAH+F P G H D E ++ D
Sbjct: 157 LRT-GTADIMVAFGKKEHGDYYPFDGPDGLLAHAFPPGEKIGGDTHFDDDEMFSTD---- 211
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYGS 224
+L VA HE GH LGL HS ++M+P + L DD+QG+QALYGS
Sbjct: 212 --NKGYNLFVVAAHEFGHALGLDHSRDPGSLMFPVYTYTETSRFVLPDDDVQGIQALYGS 269
>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
tropicalis]
Length = 518
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
EN N + + + A + W+ + F ET + DIR+ F G HGDG PFDG
Sbjct: 93 ENSPNTMSQDVSRTLIGTALAVWSKETQLQFRETREQ--PDIRVEFVTGSHGDGYPFDGQ 150
Query: 136 LGVLAHSFSP----ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G L H+F P +G+ H+DA E+W+ + +E+ DL +VAVHE GH LGL HS
Sbjct: 151 GGTLGHAFFPGVGERAGETHMDADESWS--YNTEE---GTDLFAVAVHEFGHSLGLYHSS 205
Query: 192 VKEAVMYPTLKPR---DKKVDLALDDIQGVQALYGS 224
+ ++M P + + L DD+ G+Q LYG
Sbjct: 206 SENSIMKPYYQGTVGDPSRYRLPPDDVDGIQTLYGQ 241
>gi|6678900|ref|NP_032635.1| matrix metalloproteinase-15 precursor [Mus musculus]
gi|12585269|sp|O54732.1|MMP15_MOUSE RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
Full=Membrane-type matrix metalloproteinase 2;
Short=MT-MMP 2; Short=MTMMP2; AltName:
Full=Membrane-type-2 matrix metalloproteinase;
Short=MT2-MMP; Short=MT2MMP; Flags: Precursor
gi|2662366|dbj|BAA23667.1| membrane type-2 matrix metalloproteinase [Mus musculus]
gi|34784408|gb|AAH57952.1| Matrix metallopeptidase 15 [Mus musculus]
gi|55777344|gb|AAH47278.1| Matrix metallopeptidase 15 [Mus musculus]
Length = 657
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L GK H+ FS +N L + +RAF W V
Sbjct: 119 ANLRRRRKRYTLT-GKAWNNYHL------TFSIQNYTEKLGWYNSMEAVRRAFQVWEQVT 171
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDGV G LAH++ P G H
Sbjct: 172 PLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHF 231
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLA 211
DA E W S + L VAVHE+GH LGL HS A+M P + D L
Sbjct: 232 DADEPWTF---SSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDNFQLP 288
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYGS
Sbjct: 289 EDDLRGIQQLYGS 301
>gi|326929890|ref|XP_003211086.1| PREDICTED: stromelysin-3-like [Meleagris gallopavo]
Length = 453
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 16/171 (9%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
T ++ + A W+ V P++F E + ADI I F HGD PFDG G+LAH+F
Sbjct: 91 TKVRRTIEEALKVWSDVTPLTFTEVQE-GRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 149
Query: 145 PES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
P++ G H D ETW + + + DL VA HE GH+LGL H+ V +++M P
Sbjct: 150 PKTHREGDVHFDYDETWTI-----GNNLGTDLLQVAAHEFGHVLGLQHTTVSKSLMSPFY 204
Query: 202 KPRDKKVDLALDDIQGVQALYGS---NPNFT---IGSLVESDISTNLAVDL 246
R + L+ DD QG+Q LYG +P+ T L + D+ TN +L
Sbjct: 205 IFR-YPLSLSEDDKQGIQYLYGKPKLDPDPTPTQPAELPQPDLETNEITNL 254
>gi|9635290|ref|NP_059188.1| ORF40 [Xestia c-nigrum granulovirus]
gi|6175684|gb|AAF05154.1|AF162221_40 ORF40 [Xestia c-nigrum granulovirus]
Length = 469
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
D+ A+I+I F +H D PFDG GVLAH+F P +G H DAAE W + K P
Sbjct: 114 DNTTEANIKISFARSNHNDSHPFDGKGGVLAHTFFPPTGIIHFDAAEDWRLLDDDHKIPE 173
Query: 170 -AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
+ L VA HEIGH LGL H+ V++A+MY ++K L DD G+ LY NP
Sbjct: 174 DGISLYLVAAHEIGHALGLHHTSVRDAIMYWYYN--NEKTGLHQDDANGMSQLYADNP 229
>gi|21686706|ref|NP_663206.1| metalloproteinase MP-NASE [Phthorimaea operculella granulovirus]
gi|21637022|gb|AAM70239.1| metalloproteinase MP-NASE [Phthorimaea operculella granulovirus]
Length = 469
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWA-SVIPVSFIETDDYDFADIRIGFYNGDH 126
++Y+ ++ YL + +RAF W S+I + ++ ++ ++I + FY GDH
Sbjct: 82 NITYSIDLSSVPKYLDQNLVLNETRRAFEMWQNSMIKFNMVK---FNQSNISVKFYRGDH 138
Query: 127 GDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLG 186
GDG FDG G LAH++ P +G+ HLDA E W ++ + V +V +HEIGH LG
Sbjct: 139 GDGLKFDGPGGYLAHAYPPPNGQIHLDADEHWIIN-DKNSADDTVFYFTVLLHEIGHALG 197
Query: 187 LTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNF 228
L HS +++MY L D K L+ DD GV LY NP +
Sbjct: 198 LFHSSNHQSIMYH-LYDGDIK-SLSNDDTNGVDQLYVHNPKY 237
>gi|354494998|ref|XP_003509619.1| PREDICTED: matrix metalloproteinase-15 [Cricetulus griseus]
gi|344245640|gb|EGW01744.1| Matrix metalloproteinase-15 [Cricetulus griseus]
Length = 555
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R +K Y L GK W H FS +N L + +RAF W V P+ F
Sbjct: 21 RRRKRYTLT-GK-TWNSH-----HLTFSIQNYTEKLGWHNSMEAVRRAFRVWEQVTPLVF 73
Query: 107 IETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAE 156
E D ADI + F +G HGD PFDGV G LAH++ P G H DA E
Sbjct: 74 REVSYDDIRLRRREEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADE 133
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDI 215
W S + L VAVHE+GH LGL HS A+M P + D L DD+
Sbjct: 134 PWTF---SSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDNFQLPEDDL 190
Query: 216 QGVQALYGS 224
+G+Q LYGS
Sbjct: 191 RGIQQLYGS 199
>gi|345793895|ref|XP_544383.3| PREDICTED: matrix metalloproteinase-15 [Canis lupus familiaris]
Length = 900
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L G+ +W H FS +N L +RAF W
Sbjct: 345 ANLRRRRKRYAL-TGR-KWNNH-----HLTFSIQNYTEKLGWYHSLEAVRRAFRVWEQAT 397
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 398 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 457
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLA 211
DA E W S L VAVHE+GH LGL HS A+M P + D L
Sbjct: 458 DADEPWTF---SSTDLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDTFQLP 514
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 515 EDDLRGIQQLYGT 527
>gi|262401481|gb|ACY66641.1| matrix metalloproteinase 1 isoform 1 [Scylla paramamosain]
Length = 198
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
D+ AF W V + F I + F G+HGDG+PFDG G LAH++
Sbjct: 8 NDVDREIAAAFQVWEDVTDLQFQRASSGK-VHIEVRFEKGEHGDGDPFDGPGGTLAHAYF 66
Query: 145 P-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
P G H D +E W + +S +L VA HE GH LGL+HS V+ ++M P +
Sbjct: 67 PIYGGDAHFDDSEVWTL-----RSNRGTNLFQVAAHEFGHSLGLSHSDVRSSLMAPFYRG 121
Query: 204 RDKKVDLALDDIQGVQALYG 223
+ +L DDI+G+QALYG
Sbjct: 122 YESSFELDQDDIKGIQALYG 141
>gi|444724336|gb|ELW64943.1| Matrilysin [Tupaia chinensis]
Length = 262
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P P+WT V +++++ L + + +AF W VIP++F + + A
Sbjct: 96 PQGPKWTSSVVTYRIASYTRD-----LPRFQVDQIVAKAFQMWGKVIPLNFRKVER-GIA 149
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD PFDG LAH+F P G H D ETW G ++
Sbjct: 150 DIILRFAVGVHGDPYPFDGPGNTLAHAFFPGPGLGGDAHFDDDETWTDGRGR-----GIN 204
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPT-LKPRDKKVDLALDDIQGVQALYGS 224
A HE+GH LGL HS ++VMYPT + + L+ DDI+ +Q LYG+
Sbjct: 205 FLYTATHELGHSLGLPHSSNPKSVMYPTYMNENSEDFQLSWDDIRSIQKLYGN 257
>gi|442623038|ref|NP_610511.3| matrix metalloproteinase 2, isoform D [Drosophila melanogaster]
gi|440214231|gb|AAF58911.6| matrix metalloproteinase 2, isoform D [Drosophila melanogaster]
Length = 650
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
+ ++ + + A WA+ ++F E D ADI+I F HGDG FDG VLAH+F
Sbjct: 54 SKVERMVQTALDVWANHSKLTFREVYS-DQADIQILFARRAHGDGYKFDGPGQVLAHAFY 112
Query: 145 PESGK---FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
P G+ H DA ETW D S+ S + +VA+HE+GH LGL HS + +AVM+P
Sbjct: 113 PGEGRGGDAHFDADETWNFDGESDDSH-GTNFLNVALHELGHSLGLAHSAIPDAVMFPWY 171
Query: 202 KPRDKKVDLALDDIQGVQALYGS 224
+ + +L DD G+Q LYG+
Sbjct: 172 QNNEVAGNLPDDDRYGIQQLYGT 194
>gi|73956582|ref|XP_848890.1| PREDICTED: matrix metalloproteinase-23 [Canis lupus familiaris]
Length = 394
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P +A R ++ Y L P + RW H +T N+++ ++ + AF W+ V
Sbjct: 74 PLQAPRRRR-YTLTPARLRWD-HFNLTYRILSFPRNLLS---PSETRRGLATAFRMWSDV 128
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 129 SPFSFREVAPEQPSDLRIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 188
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 189 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKT-LSQ 247
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 248 DELWGLHRLYGC 259
>gi|157833825|pdb|1SLM|A Chain A, Crystal Structure Of Fibroblast Stromelysin-1: The
C-Truncated Human Proenzyme
Length = 255
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 86 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 137
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 138 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 190
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 191 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 250
Query: 227 N 227
+
Sbjct: 251 D 251
>gi|449282290|gb|EMC89143.1| Matrix metalloproteinase-24, partial [Columba livia]
Length = 571
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 46 TRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVS 105
+R KK Y L K R +H+ +S N + D + ++AF W V P++
Sbjct: 76 SRRKKRYALTGQKWR-QKHI------TYSVHNYTPKVGEVDTRRAIRQAFDVWQRVTPLT 128
Query: 106 FIET------DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAE 156
F E +D ADI I F +G HGD PFDG G LAH++ P G H D+ E
Sbjct: 129 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 188
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDI 215
W + + DL VAVHE+GH LGL HS A+M P + + L DD+
Sbjct: 189 PWTLGNSNHD---GNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDL 245
Query: 216 QGVQALYG 223
QG+Q +YG
Sbjct: 246 QGIQKIYG 253
>gi|373428621|gb|AEY69045.1| matrix metalloproteinase [Thamnodynastes strigatus]
Length = 338
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 104/217 (47%), Gaps = 30/217 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y F +P+W H +T ++NY L I F RAF W + P++F
Sbjct: 110 YTTFNREPKWD-HTDLTY-------RVVNYSPDLDGATIDDAFSRAFGVWGNQAPLTFTR 161
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSF----SPESGKFHLDAAETWAVDFGS 164
+ + DI I F + +HGDG FDG GVLAH++ SP SG H D E W + G
Sbjct: 162 REQGNV-DILIQFVSREHGDGNAFDGQNGVLAHAYAPGRSPISGDAHFDEDELWTL--GG 218
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG- 223
+ L VA HE GH LGL HS ++ A+M+PT L DDI G+Q LYG
Sbjct: 219 DN---GFSLFLVAAHEFGHSLGLGHSNIQGALMFPTYA-YQANFRLHSDDIAGIQYLYGQ 274
Query: 224 -SNPNFT--IGSLVESDIST----NLAVDLRIKSSMW 253
+ P + + L E+ ST +VD I S++
Sbjct: 275 RAGPQSSAPLQPLTEAGDSTVDDDRCSVDYLISDSLF 311
>gi|5821823|pdb|1BIW|A Chain A, Design And Synthesis Of Conformationally-Constrained Mmp
Inhibitors
gi|5821824|pdb|1BIW|B Chain B, Design And Synthesis Of Conformationally-Constrained Mmp
Inhibitors
gi|5821875|pdb|1BQO|A Chain A, Discovery Of Potent, Achiral Matrix Metalloproteinase
Inhibitors
gi|5821876|pdb|1BQO|B Chain B, Discovery Of Potent, Achiral Matrix Metalloproteinase
Inhibitors
gi|6730091|pdb|1B3D|A Chain A, Stromelysin-1
gi|6730092|pdb|1B3D|B Chain B, Stromelysin-1
gi|7546439|pdb|1CQR|A Chain A, Crystal Structure Of The Stromelysin Catalytic Domain At
2.0 A Resolution
gi|7546440|pdb|1CQR|B Chain B, Crystal Structure Of The Stromelysin Catalytic Domain At
2.0 A Resolution
gi|9955066|pdb|1C3I|A Chain A, Human Stromelysin-1 Catalytic Domain Complexed With
Ro-26-2812
gi|9955067|pdb|1C3I|B Chain B, Human Stromelysin-1 Catalytic Domain Complexed With
Ro-26-2812
gi|11514292|pdb|1D8M|A Chain A, Crystal Structure Of Mmp3 Complexed With A Heterocycle-
Based Inhibitor
gi|11514293|pdb|1D8M|B Chain B, Crystal Structure Of Mmp3 Complexed With A Heterocycle-
Based Inhibitor
gi|11514340|pdb|1D7X|A Chain A, Crystal Structure Of Mmp3 Complexed With A Modified
Proline Scaffold Based Inhibitor.
gi|11514341|pdb|1D7X|B Chain B, Crystal Structure Of Mmp3 Complexed With A Modified
Proline Scaffold Based Inhibitor.
gi|11514343|pdb|1D8F|A Chain A, Crystal Structure Of Mmp3 Complexed With A Piperazine
Based Inhibitor.
gi|11514344|pdb|1D8F|B Chain B, Crystal Structure Of Mmp3 Complexed With A Piperazine
Based Inhibitor.
gi|11514709|pdb|1D5J|A Chain A, Crystal Structure Of Mmp3 Complexed With A Thiazepine
Based Inhibitor.
gi|11514710|pdb|1D5J|B Chain B, Crystal Structure Of Mmp3 Complexed With A Thiazepine
Based Inhibitor.
gi|16975078|pdb|1G49|A Chain A, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
gi|16975079|pdb|1G49|B Chain B, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
gi|16975364|pdb|1G05|A Chain A, Heterocycle-Based Mmp Inhibitor With P2'substituents
gi|16975365|pdb|1G05|B Chain B, Heterocycle-Based Mmp Inhibitor With P2'substituents
gi|18655790|pdb|1HY7|A Chain A, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
gi|18655791|pdb|1HY7|B Chain B, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
gi|159162122|pdb|1BM6|A Chain A, Solution Structure Of The Catalytic Domain Of Human
Stromelysin-1 Complexed To A Potent Non-Peptidic
Inhibitor, Nmr, 20 Structures
gi|159164778|pdb|2SRT|A Chain A, Catalytic Domain Of Human Stromelysin-1 At Ph 5.5 And 40oc
Complexed With Inhibitor
gi|357380879|pdb|1SLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Fibroblast Stromelysin-1 Inhibited With The
N-Carboxy-Alkyl Inhibitor L-702,842
gi|451928624|pdb|4DPE|A Chain A, Structure Of Mmp3 Complexed With A Platinum-based
Inhibitor.
gi|451928625|pdb|4DPE|B Chain B, Structure Of Mmp3 Complexed With A Platinum-based
Inhibitor.
gi|453056257|pdb|4JA1|A Chain A, Structure Of Mmp3 Complexed With A Platinum-based
Inhibitor
gi|453056258|pdb|4JA1|B Chain B, Structure Of Mmp3 Complexed With A Platinum-based
Inhibitor
Length = 173
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 168
Query: 227 N 227
+
Sbjct: 169 D 169
>gi|344257047|gb|EGW13151.1| Matrix metalloproteinase-23 [Cricetulus griseus]
Length = 358
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
++ Y L P + RW H +T N++N + + AF W+ V P F E
Sbjct: 44 RRRYTLTPARLRWN-HFNLTYRILSFPRNLLN---PEETRQGLAAAFRMWSDVSPFRFRE 99
Query: 109 TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
+D++IGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 100 VAPDLPSDLQIGFYPTNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGP 159
Query: 162 --FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ +K DL VA HEIGH LGL HS EA+M+ R K L+ D++ G+
Sbjct: 160 TRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQQHEALMHINATLRGWKA-LSQDELWGLH 218
Query: 220 ALYGS 224
LYG
Sbjct: 219 RLYGC 223
>gi|334321981|ref|XP_001366929.2| PREDICTED: matrix metalloproteinase-23-like [Monodelphis domestica]
Length = 469
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P +A R K Y + P + W H +T N+IN ++ + AF W+SV
Sbjct: 75 PPKARR--KRYTITPSRLHWD-HFNLTYKILSYPRNLINQ---SETRRGLGAAFRMWSSV 128
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P +F E +D++IGFY +H D FDG G LAH+F P +G+ H D +
Sbjct: 129 SPFTFREVAPALPSDLKIGFYPINHTDCLRSVVHRCFDGTTGELAHAFFPPNGEIHFDDS 188
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W V F +K DL +A HEIGH LGL HS A+M+ KKV ++
Sbjct: 189 EYWIVGETRFSWKKGVWLTDLVHIAAHEIGHALGLMHSLNPNALMHINATLTGKKV-ISQ 247
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 248 DEMWGMHRLYGC 259
>gi|270012816|gb|EFA09264.1| matrix metalloproteinase 2 [Tribolium castaneum]
Length = 701
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ V +A WA ++F E D ADI I F G+HGD PFDG +LAH+F P
Sbjct: 209 VRLVISKALDVWARHSKLTFTEVDSPK-ADILIFFVRGEHGDNFPFDGKGVILAHAFFPN 267
Query: 147 SG---KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H DA E W S++ +L +VA HE GH LGL+HS + A+MYP K
Sbjct: 268 GGHSIDVHFDADEAWTTVPNSDE---GTNLFNVAAHEFGHSLGLSHSSEEGALMYPWYKE 324
Query: 204 RDKKVDLAL--DDIQGVQALYGS 224
+ D L DD G+QALYG+
Sbjct: 325 MENGFDYELPDDDKLGIQALYGA 347
>gi|340707742|pdb|3OHO|A Chain A, Catalytic Domain Of Stromelysin-1 In Complex With
N-Hydroxy-2-(4- Methylphenylsulfonamido)acetamide
Length = 169
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 168
Query: 227 N 227
+
Sbjct: 169 D 169
>gi|354505685|ref|XP_003514898.1| PREDICTED: matrix metalloproteinase-23-like [Cricetulus griseus]
Length = 393
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
++ Y L P + RW H +T N++N + + AF W+ V P F E
Sbjct: 79 RRRYTLTPARLRWN-HFNLTYRILSFPRNLLN---PEETRQGLAAAFRMWSDVSPFRFRE 134
Query: 109 TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
+D++IGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 135 VAPDLPSDLQIGFYPTNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGP 194
Query: 162 --FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ +K DL VA HEIGH LGL HS EA+M+ R K L+ D++ G+
Sbjct: 195 TRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQQHEALMHINATLRGWKA-LSQDELWGLH 253
Query: 220 ALYGS 224
LYG
Sbjct: 254 RLYGC 258
>gi|301778036|ref|XP_002924430.1| PREDICTED: matrix metalloproteinase-23-like [Ailuropoda
melanoleuca]
Length = 393
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P +A R ++ Y L P + RW H +T N+++ ++ + AF W+ V
Sbjct: 73 PLQAPRRRR-YTLTPARLRWD-HFNLTYRILSFPRNLLS---PSETRRGLATAFRMWSDV 127
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 128 SPFSFREVAPEQPSDLRIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 187
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 188 EYWILGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKT-LSQ 246
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 247 DELWGLHRLYGC 258
>gi|157818219|ref|NP_001099638.1| matrix metallopeptidase 15 precursor [Rattus norvegicus]
gi|149032397|gb|EDL87288.1| rCG39153 [Rattus norvegicus]
Length = 657
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 73 FSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET--DDYDF-----ADIRIGFYNGD 125
FS +N L + +RAF W V P+ F E DD ADI + F +G
Sbjct: 142 FSIQNYTEKLGWYNSMEAVRRAFQVWEQVTPLVFQEVPYDDIRLRRRAEADIMVLFASGF 201
Query: 126 HGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDGV G LAH++ P G H DA E W S + L VAVHE+G
Sbjct: 202 HGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTF---SSTDLHGISLFLVAVHELG 258
Query: 183 HLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGS 224
H LGL HS A+M P + D L DD++G+Q LYGS
Sbjct: 259 HALGLEHSSNPSAIMAPFYQWMDTDNFQLPEDDLRGIQQLYGS 301
>gi|449484249|ref|XP_002198018.2| PREDICTED: stromelysin-2-like [Taeniopygia guttata]
Length = 485
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ Y FP P W + ++Y ++NY + D++ RAF W+SV P+ F
Sbjct: 98 RSYSAFPRSPTWMKE---DVTY-----RILNYTPDMLQADVEEAIARAFQLWSSVTPLRF 149
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESG---KFHLDAAETWAVDFG 163
ADI I F HGD FDG G LAH++ P SG H D E W
Sbjct: 150 TRVYGGQ-ADIMISFAARFHGDFYSFDGPGGTLAHAYPPGSGIGGDAHFDEDENWT---- 204
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALY 222
+ +L VA HE+GH LGL+HS V A+MYP D + L DDI G+QALY
Sbjct: 205 KFTTYSGYNLFLVAAHELGHSLGLSHSNVFGALMYPIYMAVDTRNYQLHQDDIDGIQALY 264
Query: 223 GSN 225
G
Sbjct: 265 GKQ 267
>gi|383757674|ref|YP_005436659.1| putative M10A family peptidase [Rubrivivax gelatinosus IL144]
gi|381378343|dbj|BAL95160.1| putative M10A family peptidase [Rubrivivax gelatinosus IL144]
Length = 633
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 15/169 (8%)
Query: 60 RWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI 119
RW + + L+Y FS+ L + + A WA+V ++F E + D I
Sbjct: 119 RWQK---LNLTYGFSE--FSPDLDSNQARGAVRAALDLWANVTSLTFTEVSATNNPDFII 173
Query: 120 GFYNGDHGDGEPFDGVLGVLAHSFSPE------SGKFHLDAAETWAVDFGSEKSPVAVDL 173
F GDHGDG PFDGV VLAH++ P +G H D +ETW V + +D
Sbjct: 174 RFVAGDHGDGSPFDGVGRVLAHAYYPPPAGGGLAGDAHFDESETWTVILPPPAN--TIDY 231
Query: 174 ESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+VA HE GH LGL HS + A+M+P+ + L DDI G++++Y
Sbjct: 232 VTVAAHEFGHSLGLAHSQIAGALMFPSYSGPHRF--LHQDDIDGIRSIY 278
>gi|110591109|pdb|2D1O|A Chain A, Stromelysin-1 (Mmp-3) Complexed To A Hydroxamic Acid
Inhibitor
gi|110591110|pdb|2D1O|B Chain B, Stromelysin-1 (Mmp-3) Complexed To A Hydroxamic Acid
Inhibitor
Length = 171
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 168
Query: 227 N 227
+
Sbjct: 169 D 169
>gi|116620347|ref|YP_822503.1| peptidase M10A and M12B, matrixin and adamalysin [Candidatus
Solibacter usitatus Ellin6076]
gi|116223509|gb|ABJ82218.1| peptidase M10A and M12B, matrixin and adamalysin [Candidatus
Solibacter usitatus Ellin6076]
Length = 491
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET-D 110
YVL W R ++ + ++ + L ++ +RA +W +F
Sbjct: 201 YVLMSAG--WPRDSAGKVTLQYFIRSLTDQLDPATSRSEIERALREWTRYANFTFSPALQ 258
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-------SGKFHLDAAETWAVDFG 163
I I F G HGDG PFDG G LAH+F P +G HLD E WAV
Sbjct: 259 QGANRTIDILFARGTHGDGYPFDGRGGTLAHTFYPAPPNPEPIAGDMHLDGDEPWAVG-- 316
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
VDL SVA+HE GH LGL H+ + +VMYP + L+ DDI G++ALYG
Sbjct: 317 -----TNVDLYSVALHEAGHALGLGHADLPGSVMYPYYR---LSTTLSGDDIAGIRALYG 368
Query: 224 SN 225
SN
Sbjct: 369 SN 370
>gi|170582316|ref|XP_001896076.1| Matrixin family protein [Brugia malayi]
gi|158596806|gb|EDP35086.1| Matrixin family protein [Brugia malayi]
Length = 306
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 87 IKAVFKRAFSKWASVIPVSFI--------ETDDYDFADIRIGFYNGDHGDGEPFDGVLGV 138
+K V ++AF KW++ + + T A+ + F HGD E FDG G+
Sbjct: 165 VKNVLQQAFEKWSNSSRGALLFKDLSPSDRTTGTTDANFDVLFAKYAHGDKESFDGFGGI 224
Query: 139 LAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+AHS P G H D +E W++D +DL VA+HEIGH LGL HS +A+M+
Sbjct: 225 VAHSGYPIEGIIHFDGSEYWSID-----GRNGLDLRYVALHEIGHALGLRHSNDPKAIMH 279
Query: 199 PTLKPRDKKVDLALDDIQGVQALYG 223
P + K +LA DDI G++ LYG
Sbjct: 280 PYYSDQLKDFELAEDDIMGIRKLYG 304
>gi|159163166|pdb|1UMS|A Chain A, Stromelysin-1 Catalytic Domain With Hydrophobic Inhibitor
Bound, Ph 7.0, 32oc, 20 Mm Cacl2, 15% Acetonitrile; Nmr
Ensemble Of 20 Structures
gi|159163167|pdb|1UMT|A Chain A, Stromelysin-1 Catalytic Domain With Hydrophobic Inhibitor
Bound, Ph 7.0, 32oc, 20 Mm Cacl2, 15% Acetonitrile; Nmr
Average Of 20 Structures Minimized With Restraints
gi|5639848|gb|AAD45887.1|AF156935_1 stromelysin catalytic domain [synthetic construct]
Length = 174
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 168
Query: 227 N 227
+
Sbjct: 169 D 169
>gi|442623036|ref|NP_001260830.1| matrix metalloproteinase 2, isoform C [Drosophila melanogaster]
gi|440214230|gb|AGB93363.1| matrix metalloproteinase 2, isoform C [Drosophila melanogaster]
Length = 606
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 5/143 (3%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
+ ++ + + A WA+ ++F E D ADI+I F HGDG FDG VLAH+F
Sbjct: 10 SKVERMVQTALDVWANHSKLTFREVYS-DQADIQILFARRAHGDGYKFDGPGQVLAHAFY 68
Query: 145 PESGK---FHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
P G+ H DA ETW D S+ S + +VA+HE+GH LGL HS + +AVM+P
Sbjct: 69 PGEGRGGDAHFDADETWNFDGESDDS-HGTNFLNVALHELGHSLGLAHSAIPDAVMFPWY 127
Query: 202 KPRDKKVDLALDDIQGVQALYGS 224
+ + +L DD G+Q LYG+
Sbjct: 128 QNNEVAGNLPDDDRYGIQQLYGT 150
>gi|410971813|ref|XP_003992357.1| PREDICTED: collagenase 3 [Felis catus]
Length = 470
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L +++ FK+A W+ V P++F
Sbjct: 102 EYNVFPRTLKWSK---TNLTY-----RIVNYTPDLTHPEVEKAFKKALKVWSDVTPLNFT 153
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 154 RLHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 207
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
+ +L VA HE GH LGL HS A+M+P + L DD+QG+Q+LYG
Sbjct: 208 -STSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGQSHFMLPDDDVQGIQSLYG 266
Query: 224 ---SNPN 227
+PN
Sbjct: 267 PGDEDPN 273
>gi|148679223|gb|EDL11170.1| matrix metallopeptidase 15, isoform CRA_b [Mus musculus]
Length = 517
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 83/162 (51%), Gaps = 15/162 (9%)
Query: 74 SKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF-------ADIRIGFYNGDH 126
S+ + ++ T ++AV +RAF W V P+ F E D ADI + F +G H
Sbjct: 4 SRTTLRSWAGTTPMEAV-RRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFH 62
Query: 127 GDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGH 183
GD PFDGV G LAH++ P G H DA E W S + L VAVHE+GH
Sbjct: 63 GDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTF---SSTDLHGISLFLVAVHELGH 119
Query: 184 LLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGS 224
LGL HS A+M P + D L DD++G+Q LYGS
Sbjct: 120 ALGLEHSSNPSAIMAPFYQWMDTDNFQLPEDDLRGIQQLYGS 161
>gi|91089485|ref|XP_969495.1| PREDICTED: similar to matrix metalloproteinase [Tribolium
castaneum]
Length = 632
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ V +A WA ++F E D ADI I F G+HGD PFDG +LAH+F P
Sbjct: 140 VRLVISKALDVWARHSKLTFTEVDSPK-ADILIFFVRGEHGDNFPFDGKGVILAHAFFPN 198
Query: 147 SG---KFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H DA E W S++ +L +VA HE GH LGL+HS + A+MYP K
Sbjct: 199 GGHSIDVHFDADEAWTTVPNSDE---GTNLFNVAAHEFGHSLGLSHSSEEGALMYPWYKE 255
Query: 204 RDKKVDLAL--DDIQGVQALYGS 224
+ D L DD G+QALYG+
Sbjct: 256 MENGFDYELPDDDKLGIQALYGA 278
>gi|357486237|ref|XP_003613406.1| Matrix metalloproteinase-21 [Medicago truncatula]
gi|355514741|gb|AES96364.1| Matrix metalloproteinase-21 [Medicago truncatula]
Length = 370
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 14/177 (7%)
Query: 53 VLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPV-SFIETDD 111
+ +P +W L+Y F+ +N I L++T+ VF++A ++W+ V +F ET
Sbjct: 164 ISYPKGNQWFPKGTKNLTYGFAPKNEIP-LNVTN---VFRKALTRWSQTTRVLNFTETTS 219
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLA---HSFSPESGKFHLDAAETWAVDFGSEKSP 168
YD ADI+I F N + DG +D V+ V S + +G LD + W F +E
Sbjct: 220 YDDADIKIVFNNMTYDDG-IYDVVVAVTLIKLDSANMNTGLISLDITKHWV--FPTEDG- 275
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS 224
+DLE+ A+H+IGHLLGL HS +++MYPT+ P + KKV + D +Q LY S
Sbjct: 276 -ELDLETAAMHQIGHLLGLEHSSDSKSIMYPTILPSQQKKVQITDSDNLAIQKLYSS 331
>gi|3650496|gb|AAC62616.1| metalloprotease mmp21/22A [Homo sapiens]
Length = 390
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H+ +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HLNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|397471525|ref|XP_003807340.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-23 [Pan
paniscus]
Length = 389
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFXPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|296206497|ref|XP_002750233.1| PREDICTED: matrix metalloproteinase-23 [Callithrix jacchus]
Length = 390
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGSLPSRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PQETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSTLHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|126327136|ref|XP_001366673.1| PREDICTED: matrix metalloproteinase-27-like [Monodelphis domestica]
Length = 513
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 23/176 (13%)
Query: 59 PRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P W +H +L+Y ++NY + +D++ ++A W+ V P++F A
Sbjct: 104 PGWRKH---SLTY-----RLLNYTPDMEKSDVEEAIQKALEVWSKVTPLTFTRISK-GIA 154
Query: 116 DIRIGFYNGDHGDG-EPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
DI + F HG FDG LGVL H+F P G H D E W K
Sbjct: 155 DIMVAFRTRAHGKCPRQFDGPLGVLGHAFPPGWGIGGDTHFDEDENWT------KDSSGF 208
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+M+P D K L+ DDI+G+QA+YGS P
Sbjct: 209 NLFLVAAHEFGHSLGLSHSNDPSALMFPNYAFVDPSKSPLSQDDIKGIQAIYGSWP 264
>gi|156404462|ref|XP_001640426.1| predicted protein [Nematostella vectensis]
gi|156227560|gb|EDO48363.1| predicted protein [Nematostella vectensis]
Length = 309
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYL-HITDIKA-----VFKRAFSKWASVIPVSFIETD 110
GK R ++ S+ N+ Y+ H D+ A +F AF WA V ++F +T
Sbjct: 88 GKSNRARRYSTNIANRHSQNNLKYYVQHGADLSADLQDQIFATAFQHWAKVSSLTFSQTS 147
Query: 111 DYDFADIRIGFYNGDHGDG-------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFG 163
+ A++ I F + +H +PFDG G LAH+ S H D ET+
Sbjct: 148 ILNDANLLISFGSRNHKGTAREPICTDPFDGEGGTLAHA-SLAGADAHFDEDETF----- 201
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+ S V+L VAVHE GH LGL HS V+ A+MYP D K+ L DDI+GVQ+LYG
Sbjct: 202 THNSYDGVNLLWVAVHEFGHNLGLDHSDVQGAIMYPYYTGYDPKIALHSDDIKGVQSLYG 261
>gi|21465444|pdb|1GKD|A Chain A, Mmp9 Active Site Mutant-Inhibitor Complex
gi|21465445|pdb|1GKD|B Chain B, Mmp9 Active Site Mutant-Inhibitor Complex
Length = 163
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
F G +W H + + +N L I F RAF+ W++V P++F D
Sbjct: 5 FEGDLKWHHH-----NITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRD- 58
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F +HGDG PFDG G+LAH+F P G H D E W++ G S
Sbjct: 59 ADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGQGYS---- 114
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
L VA H+ GH LGL HS V EA+MYP + + L DD+ G++ LY
Sbjct: 115 -LFLVAAHQFGHALGLDHSSVPEALMYPMYRFTEGPP-LHKDDVNGIRHLY 163
>gi|426370258|ref|XP_004052085.1| PREDICTED: stromelysin-2 [Gorilla gorilla gorilla]
Length = 476
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 102 FPGMPKWRK---THLTY-----RIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRMYE 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG LAH++ P +G + H D E W D
Sbjct: 154 GE-ADIMISFAVKEHGDFYPFDGPGHSLAHAYPPGAGLYGDIHFDDDEKWTEDAS----- 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK--KVDLALDDIQGVQALYGSNP 226
+L VA HE+GH LGL HS EA+MYP + + L+ DD+ G+Q+LYG P
Sbjct: 208 -GTNLFLVAAHELGHSLGLFHSANTEALMYPLYNSLTELAQFRLSQDDVNGIQSLYGPPP 266
Query: 227 NFTIGSLV 234
T LV
Sbjct: 267 ASTEEPLV 274
>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
Length = 557
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 46 TRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVS 105
+R KK Y L K R +H+ +S N + D + ++AF W V P++
Sbjct: 87 SRRKKRYALTGQKWR-QKHI------TYSVHNYTPKVGELDTRRAIRQAFDVWQRVTPLT 139
Query: 106 FIET------DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAE 156
F E +D ADI I F +G HGD PFDG G LAH++ P G H D+ E
Sbjct: 140 FEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDE 199
Query: 157 TWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDI 215
W + + DL VAVHE+GH LGL HS A+M P + + L DD+
Sbjct: 200 PWTLGNSNHD---GNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDL 256
Query: 216 QGVQALYG 223
QG+Q +YG
Sbjct: 257 QGIQKIYG 264
>gi|5821975|pdb|1CAQ|A Chain A, X-Ray Structure Of Human Stromelysin Catalytic Domain
Complexes With Non-Peptide Inhibitors: Implication For
Inhibitor Selectivity
gi|6137637|pdb|1CIZ|A Chain A, X-ray Structure Of Human Stromelysin Catalytic Domain
Complexes With Non-peptide Inhibitors: Implication For
Inhibitor Selectivity
gi|14278317|pdb|1G4K|A Chain A, X-ray Structure Of A Novel Matrix Metalloproteinase
Inhibitor Complexed To Stromelysin
gi|14278318|pdb|1G4K|B Chain B, X-ray Structure Of A Novel Matrix Metalloproteinase
Inhibitor Complexed To Stromelysin
gi|14278319|pdb|1G4K|C Chain C, X-ray Structure Of A Novel Matrix Metalloproteinase
Inhibitor Complexed To Stromelysin
gi|34811010|pdb|1OO9|A Chain A, Orientation In Solution Of Mmp-3 Catalytic Domain And N-
Timp-1 From Residual Dipolar Couplings
gi|157836903|pdb|3USN|A Chain A, Structure Of The Catalytic Domain Of Human Fibroblast
Stromelysin-1 Inhibited With The Thiadiazole Inhibitor
Ipnu-107859, Nmr, 1 Structure
Length = 168
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 168
>gi|1705980|sp|P55032.1|MMP7_FELCA RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
Full=Pump-1 protease; AltName: Full=Uterine
metalloproteinase; Flags: Precursor
gi|436482|gb|AAA18222.1| PUMP-1, partial [Felis catus]
Length = 262
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADI 117
+P+W V +++++ L + + +A + W+ IP+SF DI
Sbjct: 96 RPKWISKVVTYRIISYTRD-----LPRVTVDHLVAKALNMWSKEIPLSFRRVV-LGIPDI 149
Query: 118 RIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLE 174
IGF G HGD PFDG G LAH++ P G H D E WA G + ++
Sbjct: 150 VIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDAHFDEDERWADGRG-----LGINFL 204
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
+VA HE+GH LGL HS ++VMYPT RD + L+ DI+ +Q LYG
Sbjct: 205 AVATHELGHSLGLRHSSDPDSVMYPTYGARDSENFKLSPGDIREIQELYGKR 256
>gi|449281553|gb|EMC88600.1| Stromelysin-3 [Columba livia]
Length = 421
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ + A W+ V P++F E + ADI I F HGD PFDG G+LAH+F P+
Sbjct: 57 VRRTIEEALKVWSDVTPLTFTEVQE-GRADIVIDFTRYWHGDNLPFDGPGGILAHAFFPK 115
Query: 147 S---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
+ G H D ETW + + + DL VA HE GH+LGL H+ V +++M P
Sbjct: 116 THREGDVHFDYDETWTI-----GNNLGTDLLQVAAHEFGHVLGLQHTAVSKSLMSPFYIF 170
Query: 204 RDKKVDLALDDIQGVQALYGS-----NPNFTI-GSLVESDISTN 241
R + L+ DD QG+Q LYG +P T+ L + D+ TN
Sbjct: 171 R-YPLSLSEDDKQGIQYLYGKPKLDPDPTPTLPAELPQPDLETN 213
>gi|402895064|ref|XP_003910655.1| PREDICTED: macrophage metalloelastase [Papio anubis]
Length = 470
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 55 FPGKPR---WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
F PR W +H ++Y + N ++ D+ ++AF W++V P+ F +
Sbjct: 100 FRAMPRGQIWRKHY---ITYRIN--NYTPDMNRKDVDYAIQKAFQVWSNVTPLKFSRINT 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI + F G HGD FDG G +AH+F P G H D E W SE
Sbjct: 155 -GVADILVVFARGAHGDFHAFDGKGGTIAHAFGPGPGIGGDAHFDDDEFWTTH--SE--- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
+L VAVHE+GH LGL HS +A+M+PT K D L+ DDI+G+Q+LYG
Sbjct: 209 -GTNLFLVAVHELGHSLGLGHSSDPKAIMFPTYKYVDINTFHLSADDIRGIQSLYGG 264
>gi|395815891|ref|XP_003781448.1| PREDICTED: matrix metalloproteinase-26 [Otolemur garnettii]
Length = 318
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Query: 78 MINYLHI---TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
+INY H + + + A S W++V P+ F + D ADI+I F N DHGD PFDG
Sbjct: 141 VINYPHAMKPSTVSDIMYNAASLWSTVTPLIFQQVQSED-ADIKISFLNWDHGDDLPFDG 199
Query: 135 VLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
GVLAH+F P S G H D E W+ S +L VA HEIGH LGL HS
Sbjct: 200 PDGVLAHAFLPNSVNPGVIHFDNNEHWS------SSNTGYNLFLVATHEIGHSLGLYHSE 253
Query: 192 VKEAVMYPTLKPRDKKV-DLALDDIQGVQALY 222
+ ++MYP + + + L DDI+ L+
Sbjct: 254 NQNSIMYPMYQYHNPRTFHLGADDIKNPANLW 285
>gi|60810636|gb|AAX36150.1| matrix metalloproteinase 23B [synthetic construct]
Length = 391
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHQLYGC 255
>gi|347970929|ref|XP_554330.4| AGAP003929-PA [Anopheles gambiae str. PEST]
gi|333469553|gb|EAL39361.4| AGAP003929-PA [Anopheles gambiae str. PEST]
Length = 682
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ I + S P+ + ++D ++ RH++ YV+ G W + ++Y + N +
Sbjct: 81 RTIELMSAPRCGVVDVMQHD--QSLRHRR-YVI--GSESWRKR---RITYFIA--NWSSK 130
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
+ + +AF +W+ + F+ D ADI +GF +G HGD PFDG VLAH
Sbjct: 131 VGEDAVAKFMAKAFGEWSKYSKLRFVRVYDPS-ADIIVGFGSGHHGDNYPFDGPGNVLAH 189
Query: 142 SFSPE-----SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAV 196
+F P G H D E W + S VD SVA+HE+GH LGL HSPV ++
Sbjct: 190 AFYPYEMNAYGGDVHFDEDENWKEN--STHLSEGVDFYSVAIHELGHSLGLAHSPVYSSL 247
Query: 197 MYPTLKPRDKKVDLALDDIQGVQALYGSNPNFT 229
M+P K + L DDI + LY NP+ T
Sbjct: 248 MFPYYKGIAQGT-LDYDDILAMYQLYIQNPHIT 279
>gi|443690589|gb|ELT92681.1| hypothetical protein CAPTEDRAFT_164703 [Capitella teleta]
Length = 518
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 22 QCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINY 81
+ I+V P+ + D + A+R K Y + P K + LSY+
Sbjct: 13 RTISVMRKPRCGVPDVD----SGASRRGKRYAIGPSKWENKQLSFRILSYSPD------- 61
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L D + RAF W V +SF E + ADI + F HGD PFDG VLAH
Sbjct: 62 LPAADQRDALIRAFRVWMDVTQLSFHE-EQQGSADIMVTFGRHYHGDPYPFDGPGMVLAH 120
Query: 142 SFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D E W V S V+L +VA HEIGH LGL HS V ++MY
Sbjct: 121 AFFPGEERGGDVHFDEDEQWTV-----HSEEGVNLFAVAAHEIGHSLGLKHSNVPGSLMY 175
Query: 199 PTLKPRDKKVDLALDDIQGVQALYG 223
P + L DDI G+Q LYG
Sbjct: 176 PWYQGYTPDFHLHTDDIAGIQYLYG 200
>gi|313241389|emb|CBY33659.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Query: 57 GKPRWTRHVPMTLSYA-FSKENMINYLHITDIKAVFKRAFSKW---ASVIPVSFIETDDY 112
G P W + T+SY+ FS N + + I D +AF +W A++ PV+
Sbjct: 286 GGPAWRDN---TVSYSMFSYSNDLP-IEIQD--DTVDKAFYEWEKVANLRPVNLGPA--V 337
Query: 113 DFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE-------SGKFHLDAAETWAVDFGSE 165
D A I+I F GDH DG PFDG G LAH+F + G H D E W + G
Sbjct: 338 DSAKIKISFGRGDHWDGYPFDGQHGTLAHAFFNDPGYPNDLEGDAHFDEDEFWTL--GEG 395
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+ A VAVHE GH LGL HS EAVMYP+ KK ++ DDI+G+QALYG
Sbjct: 396 RITKAYSFFLVAVHEFGHSLGLGHSNNPEAVMYPSYH-FTKKFEMPYDDIRGIQALYG 452
>gi|355752582|gb|EHH56702.1| hypothetical protein EGM_06165 [Macaca fascicularis]
Length = 470
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 55 FPGKPR---WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
F PR W +H ++Y + N ++ D+ ++AF W++V P+ F +
Sbjct: 100 FRAMPRGQIWRKHY---ITYRIN--NYTPDMNRKDVDYAIQKAFQVWSNVTPLKFSRINT 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI + F G HGD FDG G +AH+F P G H D E W SE
Sbjct: 155 -GVADILVVFARGAHGDFHAFDGKGGTIAHAFGPGPGIGGDAHFDDDEFWTTH--SE--- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
+L VAVHE+GH LGL HS +A+M+PT K D L+ DDI+G+Q+LYG
Sbjct: 209 -GTNLFLVAVHELGHSLGLGHSSDPKAIMFPTYKYVDINTFHLSADDIRGIQSLYGG 264
>gi|432863993|ref|XP_004070224.1| PREDICTED: matrix metalloproteinase-15-like [Oryzias latipes]
Length = 645
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 23 CIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
I P+ L + +P + R KK Y L G+ +W + ++Y+ +N+ + L
Sbjct: 84 TIKAMRQPRCGLPDIEPEEPEDRAR-KKRYALT-GQ-QWDKD---HITYSIMNQNIPSSL 137
Query: 83 HITDIKAVFKRAFSKWASVIPVSF--------IETDDYDFADIRIGFYNGDHGDGEPFDG 134
+RAF W V P++F I + + +DI + F +G HGD FDG
Sbjct: 138 GEERTSGAIRRAFDIWRRVTPLTFQELPAVNNINSSQAELSDILLLFASGFHGDMSLFDG 197
Query: 135 VLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G LAH++ P G H D+ E W +D ++P +DL VAVHE+GH LGL HS
Sbjct: 198 EGGSLAHAYYPGPGIGGDTHFDSDEPWTLD---SENPEGIDLFLVAVHELGHALGLQHSE 254
Query: 192 VKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
A+M P + + L DDI+G+Q +YG
Sbjct: 255 NPNAMMAPFYQWIHPQNFTLHEDDIKGIQYIYG 287
>gi|109108472|ref|XP_001098589.1| PREDICTED: macrophage metalloelastase [Macaca mulatta]
Length = 470
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 90/177 (50%), Gaps = 19/177 (10%)
Query: 55 FPGKPR---WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
F PR W +H ++Y + N ++ D+ ++AF W++V P+ F +
Sbjct: 100 FRAMPRGQIWRKHY---ITYRIN--NYTPDMNRKDVDYAIQKAFQVWSNVTPLKFSRINT 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI + F G HGD FDG G +AH+F P G H D E W SE
Sbjct: 155 -GVADILVVFARGAHGDFHAFDGKGGTIAHAFGPGPGIGGDAHFDDDEFWTTH--SE--- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
+L VAVHE+GH LGL HS +A+M+PT K D L+ DDI+G+Q+LYG
Sbjct: 209 -GTNLFLVAVHELGHSLGLGHSSDPKAIMFPTYKYVDINTFHLSADDIRGIQSLYGG 264
>gi|403306032|ref|XP_003943550.1| PREDICTED: matrix metalloproteinase-15 [Saimiri boliviensis
boliviensis]
Length = 666
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L GK +W H FS +N L +RAF W
Sbjct: 123 ANLRRRRKRYALT-GK-KWNNH-----HLTFSIQNYTQKLGWYHSMEAVRRAFRVWEQAT 175
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 176 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGSGGFLAHAYFPGPGLGGDTHF 235
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 236 DADEPWTF---SNTDLSGNNLFLVAVHELGHALGLEHSNNPSAIMAPYYQWKDVDNFQLP 292
Query: 212 LDDIQGVQALYGS 224
DD+QG+Q LYG+
Sbjct: 293 DDDLQGIQHLYGT 305
>gi|170051326|ref|XP_001861713.1| matrix metalloproteinase [Culex quinquefasciatus]
gi|167872650|gb|EDS36033.1| matrix metalloproteinase [Culex quinquefasciatus]
Length = 536
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 21 PQCIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMIN 80
P+ + + S P+ ++ DK +R K+ Y L + +R L+Y SK
Sbjct: 70 PETMELMSLPRCGVR--DKVGFGTDSRSKR-YAL-----QGSRWKVKALTYRISK--YPA 119
Query: 81 YLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLA 140
L +++ +AFS W+ ++F I I F +HGDG+PFDG G LA
Sbjct: 120 RLDRLEVEKEIAKAFSVWSEYTDLTFTPKKSAP-VHIDIRFEVNEHGDGDPFDGPGGTLA 178
Query: 141 HSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
H++ P G H D AE W + G + +L VA HE GH LGL+HS V+ A+M P
Sbjct: 179 HAYFPVYGGDAHFDDAEFWTI--GKSR---GTNLFQVAAHEFGHSLGLSHSDVRSALMAP 233
Query: 200 TLKPRDKKVDLALDDIQGVQALYG 223
+ D L DD+QG+QALYG
Sbjct: 234 FYRGYDPVFRLDSDDVQGIQALYG 257
>gi|410971803|ref|XP_003992352.1| PREDICTED: matrilysin [Felis catus]
Length = 267
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADI 117
+P+W V +++++ L + + +A + W+ IP+SF DI
Sbjct: 101 RPKWISKVVTYRIISYTRD-----LPRVTVDHLVAKALNMWSKEIPLSFRRVV-LGIPDI 154
Query: 118 RIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLE 174
IGF G HGD PFDG G LAH++ P G H D E WA G + ++
Sbjct: 155 VIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDAHFDEDERWADGRG-----LGINFL 209
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
+VA HE+GH LGL HS ++VMYPT RD + L+ DI+ +Q LYG
Sbjct: 210 AVATHELGHSLGLRHSSDPDSVMYPTYGARDSENFKLSPGDIREIQELYGKR 261
>gi|301610871|ref|XP_002934976.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
tropicalis]
Length = 481
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 78 MINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDG 134
++NY + D+ ++AF W+ V+P++F D +DI + F DH D PFDG
Sbjct: 137 ILNYTPDMTRNDVDRAIEKAFKVWSDVVPLTFTRIYDR-VSDIEMLFAYRDHKDSLPFDG 195
Query: 135 VLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G+LAH+F+P G H D E W +L VA HE+GH LGL HS
Sbjct: 196 PSGILAHAFAPGDNIGGDVHFDEDERWT------SGSAGTNLFLVAAHELGHSLGLDHSN 249
Query: 192 VKEAVMYPT---LKPRDKKVDLALDDIQGVQALYGSNPN 227
A+MYPT + P L DDI G+ +LYG+ N
Sbjct: 250 DPNALMYPTYHYINP--NTFQLPQDDINGIHSLYGTKEN 286
>gi|150261347|pdb|2OVX|A Chain A, Mmp-9 Active Site Mutant With Barbiturate Inhibitor
gi|150261348|pdb|2OVX|B Chain B, Mmp-9 Active Site Mutant With Barbiturate Inhibitor
gi|150261349|pdb|2OVZ|A Chain A, Mmp-9 Active Site Mutant With Phosphinate Inhibitor
gi|150261350|pdb|2OVZ|B Chain B, Mmp-9 Active Site Mutant With Phosphinate Inhibitor
gi|150261351|pdb|2OW0|A Chain A, Mmp-9 Active Site Mutant With Iodine-Labeled Carboxylate
Inhibitor
gi|150261352|pdb|2OW0|B Chain B, Mmp-9 Active Site Mutant With Iodine-Labeled Carboxylate
Inhibitor
gi|150261353|pdb|2OW1|A Chain A, Mmp-9 Active Site Mutant With Trifluoromethyl Hydroxamate
Inhibitor
gi|150261354|pdb|2OW1|B Chain B, Mmp-9 Active Site Mutant With Trifluoromethyl Hydroxamate
Inhibitor
gi|150261355|pdb|2OW2|A Chain A, Mmp-9 Active Site Mutant With Difluoro Butanoic Acid
Inhibitor
gi|150261356|pdb|2OW2|B Chain B, Mmp-9 Active Site Mutant With Difluoro Butanoic Acid
Inhibitor
Length = 159
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDF 114
F G +W H + + +N L I F RAF+ W++V P++F D
Sbjct: 1 FEGDLKWHHH-----NITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRD- 54
Query: 115 ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
ADI I F +HGDG PFDG G+LAH+F P G H D E W++ G S
Sbjct: 55 ADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGQGYS---- 110
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
L VA H+ GH LGL HS V EA+MYP + + L DD+ G++ LY
Sbjct: 111 -LFLVAAHQFGHALGLDHSSVPEALMYPMYRFTEGPP-LHKDDVNGIRHLY 159
>gi|297690071|ref|XP_002822450.1| PREDICTED: stromelysin-1 [Pongo abelii]
Length = 477
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
>gi|149020731|gb|EDL78536.1| rCG64123 [Rattus norvegicus]
Length = 418
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ +RAF W+ V P++F + + DI + F+ GDHGD F+G AH+F P
Sbjct: 82 VEDAIERAFKVWSDVTPLTFERVFEEE-GDIVLSFHQGDHGDLYSFNGSKSHFAHAFPPG 140
Query: 147 ---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H D ETW + +L V HE+GH LGL+HS +EA+M+P+
Sbjct: 141 PGLGGDVHYDLDETWT------NNSDNFNLFYVTAHELGHSLGLSHSKDEEALMFPSYTW 194
Query: 204 RDKKVDLALDDIQGVQALYGSNPN 227
+K L DDI +QALYG +PN
Sbjct: 195 NNKDFVLNQDDISKIQALYGPSPN 218
>gi|260818326|ref|XP_002604334.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
gi|229289660|gb|EEN60345.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
Length = 423
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGV 135
E++ ++L T+ + + AF W+ P++F ADI I F GDH DG PFDG
Sbjct: 60 ESLTSHLTETEAREAIRDAFRVWSDYTPLTFTAVPS-GRADIIIKFSTGDHQDGSPFDGR 118
Query: 136 LGV-------LAHSFSPES--------GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
LAH+F P G H DA E W ++ SP +L VAVHE
Sbjct: 119 FDFHTGRGLRLAHAFQPPRDSNTYYIDGDTHFDADELWTLN-----SPEGTNLFQVAVHE 173
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
GH LGL+H+PV +M+P +D + DD +Q+LYG +
Sbjct: 174 FGHALGLSHTPVPGTIMFPAYIYKDNPC-MHPDDKMAIQSLYGKD 217
>gi|390341933|ref|XP_791616.2| PREDICTED: matrix metalloproteinase-24-like [Strongylocentrotus
purpuratus]
Length = 573
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 90 VFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE--- 146
V AF W V + F T + ADI + F G+HGDG FDG G LAH++ P
Sbjct: 191 VLTTAFQVWGDVARLDFNPTR-FPKADIIVQFARGNHGDGYAFDGPGGTLAHAYFPGDGI 249
Query: 147 SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK 206
G H D ET+ S+++ +L VA HEIGH LGL HS V +++M P +
Sbjct: 250 GGDVHFDEDETF-----SDRTRQGTNLFIVAAHEIGHSLGLAHSEVSKSLMAPYYQGFQP 304
Query: 207 KVDLALDDIQGVQALYGSNPN 227
+ L DD++G+Q+LYG+ N
Sbjct: 305 RFTLNTDDVRGIQSLYGARAN 325
>gi|297666705|ref|XP_002811653.1| PREDICTED: matrix metalloproteinase-23 [Pongo abelii]
Length = 390
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLVPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|296231221|ref|XP_002761064.1| PREDICTED: matrix metalloproteinase-15 [Callithrix jacchus]
Length = 666
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L GK +W H FS +N L +RAF W
Sbjct: 123 ANLRRRRKRYALT-GK-KWNNH-----HLTFSIQNYTQKLGWYHSMEAVRRAFRVWEQAT 175
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 176 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGSGGFLAHAYFPGPGLGGDTHF 235
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 236 DADEPWTF---SNTDLNGNNLFLVAVHELGHALGLEHSNNPSAIMAPYYQWKDVDNFQLP 292
Query: 212 LDDIQGVQALYGS 224
DD+QG+Q LYG+
Sbjct: 293 EDDLQGIQHLYGT 305
>gi|293348995|ref|XP_001072313.2| PREDICTED: interstitial collagenase B [Rattus norvegicus]
gi|293360883|ref|XP_235849.3| PREDICTED: interstitial collagenase B [Rattus norvegicus]
Length = 460
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ +RAF W+ V P++F + + DI + F+ GDHGD F+G AH+F P
Sbjct: 124 VEDAIERAFKVWSDVTPLTFERVFEEE-GDIVLSFHQGDHGDLYSFNGSKSHFAHAFPPG 182
Query: 147 ---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H D ETW + + +L V HE+GH LGL+HS +EA+M+P+
Sbjct: 183 PGLGGDVHYDLDETWTNNSDN------FNLFYVTAHELGHSLGLSHSKDEEALMFPSYTW 236
Query: 204 RDKKVDLALDDIQGVQALYGSNPN 227
+K L DDI +QALYG +PN
Sbjct: 237 NNKDFVLNQDDISKIQALYGPSPN 260
>gi|301630699|ref|XP_002944454.1| PREDICTED: matrix metalloproteinase-18-like, partial [Xenopus
(Silurana) tropicalis]
Length = 301
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ F G W + L+Y ++NY + D+ ++AF W+ V+P++F
Sbjct: 59 FSTFSGNAVWKKK---DLTY-----RILNYTPDMTRNDVDRAIEKAFKVWSDVVPLTFTR 110
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D +DI + F DH D PFDG G+LAH+F+P G H D E W
Sbjct: 111 IYDR-VSDIEMLFAYRDHKDSLPFDGPSGILAHAFAPGDNIGGDVHFDEDEKWT------ 163
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPT---LKPRDKKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYPT + P L DDI G+ +LY
Sbjct: 164 SGSAGTNLFLVAAHELGHSLGLDHSNDPNALMYPTYHYINP--NTFQLPQDDINGIHSLY 221
Query: 223 GSNPNFTIGSL-VESDISTNLAVDLR 247
G+ N I + + IS + LR
Sbjct: 222 GTKENPIIPIINCQEQISFDAVTTLR 247
>gi|392349804|ref|XP_003750476.1| PREDICTED: interstitial collagenase B-like [Rattus norvegicus]
Length = 393
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ +RAF W+ V P++F + + DI + F+ GDHGD F+G AH+F P
Sbjct: 124 VEDAIERAFKVWSDVTPLTFERVFEEE-GDIVLSFHQGDHGDLYSFNGSKSHFAHAFPPG 182
Query: 147 ---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
G H D ETW + + +L V HE+GH LGL+HS +EA+M+P+
Sbjct: 183 PGLGGDVHYDLDETWTNNSDN------FNLFYVTAHELGHSLGLSHSKDEEALMFPSYTW 236
Query: 204 RDKKVDLALDDIQGVQALYGSNPN 227
+K L DDI +QALYG +PN
Sbjct: 237 NNKDFVLNQDDISKIQALYGPSPN 260
>gi|164519233|ref|YP_001649020.1| matrix metalloprotease [Helicoverpa armigera granulovirus]
gi|163869419|gb|ABY47729.1| matrix metalloprotease [Helicoverpa armigera granulovirus]
Length = 596
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV 169
D+ A+I+I F DH D PFDG GVLAH+F P +G H DA E W + K P
Sbjct: 241 DNTTEANIKISFARSDHNDLHPFDGKGGVLAHTFFPPTGIIHFDAEEDWQLLDDDHKIPE 300
Query: 170 -AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
+ L VA HEIGH LGL H+ V++A+MY ++K L DD G+ LY NP
Sbjct: 301 DGISLYLVAAHEIGHALGLHHTSVRDAIMYWYYN--NEKTGLHQDDANGMSQLYADNP 356
>gi|108995571|ref|XP_001095296.1| PREDICTED: matrix metalloproteinase-23 [Macaca mulatta]
Length = 390
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|410215730|gb|JAA05084.1| matrix metallopeptidase 23B [Pan troglodytes]
Length = 390
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|5902004|ref|NP_008914.1| matrix metalloproteinase-23 precursor [Homo sapiens]
gi|117949605|sp|O75900.2|MMP23_HUMAN RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=Femalysin; AltName: Full=MIFR-1; AltName:
Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
Full=Matrix metalloproteinase-22; Short=MMP-22;
Contains: RecName: Full=Matrix metalloproteinase-23,
soluble form; Flags: Precursor
gi|2879943|dbj|BAA24833.1| MIFR-1 [Homo sapiens]
gi|3645918|gb|AAC63527.1| metalloprotease isoform A [Homo sapiens]
gi|4468604|emb|CAB38176.1| MMP-23 [Homo sapiens]
gi|7259308|dbj|BAA92769.1| MIFR/Femalysin [Homo sapiens]
gi|19343598|gb|AAH25719.1| Matrix metallopeptidase 23B [Homo sapiens]
gi|61364613|gb|AAX42573.1| matrix metalloproteinase 23B [synthetic construct]
Length = 390
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|195475106|ref|XP_002089826.1| GE22137 [Drosophila yakuba]
gi|194175927|gb|EDW89538.1| GE22137 [Drosophila yakuba]
Length = 730
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 59 PRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIR 118
P+W++ L+++ ++M + + + + A W ++F + D ADI+
Sbjct: 148 PKWSK---TDLTWSLVNQSMPDAFKV---QKMVDSALRVWEYNSKLTFRQVYS-DQADIQ 200
Query: 119 IGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEKSPVAVDLES 175
I F HGDG FDG VLAH+F P G+ H DA ETW D GS+ + + +
Sbjct: 201 ILFARRQHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGGSDDN-RGTNFLN 259
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
VA+HE+GH LGL HS AVM+P + + +L DD G+Q LYGS
Sbjct: 260 VALHELGHSLGLGHSSDPNAVMFPWYQNNEVGGNLPDDDRNGIQELYGS 308
>gi|149633273|ref|XP_001509903.1| PREDICTED: collagenase 3-like [Ornithorhynchus anatinus]
Length = 471
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 92/187 (49%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y FP K +W L+Y ++NY L ++ K+A W++V P++F
Sbjct: 103 EYNFFPRKLKWPH---FNLTY-----RIMNYTADLTQAEVDKAIKKALKVWSNVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
ADI I F +HGD PFDG G+LAH+F P G H D ETW+ D
Sbjct: 155 RLRS-GTADIMISFGRKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWSSD--- 210
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
+L VA HE GH LGL HS A+M+P + L DD+QG+QALYG
Sbjct: 211 ---SKGYNLFLVAAHEFGHSLGLDHSRDPGALMFPIYTYVGNTGFVLPDDDVQGIQALYG 267
Query: 224 S---NPN 227
+ +PN
Sbjct: 268 AGGDDPN 274
>gi|157110775|ref|XP_001651241.1| matrix metalloproteinase [Aedes aegypti]
gi|108878613|gb|EAT42838.1| AAEL005666-PA [Aedes aegypti]
Length = 573
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 69 LSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD 128
L+Y SK + L ++ +AFS W+ ++F I I F +HGD
Sbjct: 125 LTYRISK--YPSRLDRAEVDKEIAKAFSVWSEYTDLTFTAKKSAP-VHIDIRFEVNEHGD 181
Query: 129 GEPFDGVLGVLAHSFSP-ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGL 187
G+PFDG G LAH++ P G H D AE W + G + +L VA HE GH LGL
Sbjct: 182 GDPFDGPGGTLAHAYFPVYGGDAHFDDAEFWTI--GKSR---GTNLFQVAAHEFGHSLGL 236
Query: 188 THSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS-----------NPNFTIGSLVES 236
+HS V+ A+M P + D L DD+QG+QALYG NP T V+
Sbjct: 237 SHSDVRSALMAPFYRGYDPVFRLDSDDVQGIQALYGRKSGGSSGGGGFNPPRTTSRPVQR 296
Query: 237 DISTNLA 243
D + L
Sbjct: 297 DPDSELC 303
>gi|170577182|ref|XP_001893913.1| Matrixin family protein [Brugia malayi]
gi|158599789|gb|EDP37251.1| Matrixin family protein [Brugia malayi]
Length = 318
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
GK +W + +S E++ + L ++++ K+AF W++V ++ E + AD
Sbjct: 21 GKYKWEKS-----DLTYSIESLTSELSESEVRDALKKAFDTWSAVTRITLNEISEK--AD 73
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWA-VDFGSEKSPVAVDLES 175
I I F H D PFDG G+LAH+ P SG H D+ E W ++ + D+
Sbjct: 74 ITIAFARRMHNDPWPFDGEGGILAHATLPSSGILHFDSDEKWVYMNSDAISRYDTTDVLQ 133
Query: 176 VAVHEIGHLLGLTHSPVKEAVMYP----TLKPRDKKV--DLALDDIQGVQALYGSNPNFT 229
VA+HEIGH+LGL HS +++M P T+ R + L+ D++ +Q LYG N T
Sbjct: 134 VAIHEIGHVLGLEHSADSDSIMLPFYRDTVDNRGNYITPKLSASDVRNIQYLYGINDKET 193
>gi|355702794|gb|AES02050.1| matrix metallopeptidase 19 [Mustela putorius furo]
Length = 525
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEP----- 131
N+ + L +A +AF W++V P++F E FADIR+ F HG P
Sbjct: 90 NLPSTLPPHTARAALLQAFQYWSNVAPLTFREVQA-GFADIRLSFRLSFHGRQTPYCSNS 148
Query: 132 FDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
FDG VLAH+ PE G H D E W +E++ V+L +A HE+GH LGL HS
Sbjct: 149 FDGPGRVLAHADIPELGSVHFDEDELW-----TERTYQGVNLRIIAAHELGHALGLGHSR 203
Query: 192 VKEAVMYPTLKPRDKKVDLALDDIQGVQALYG-SNP 226
+A+M P L DD+ G+QALYG NP
Sbjct: 204 YTQALMAPVYAGYRPHFKLHPDDVAGIQALYGKKNP 239
>gi|307207361|gb|EFN85111.1| Matrix metalloproteinase-25 [Harpegnathos saltator]
Length = 282
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 74/147 (50%), Gaps = 6/147 (4%)
Query: 82 LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAH 141
L ++ +A + WA ++F E + D ADI I F+ G HGDG PFDG +LAH
Sbjct: 14 LDTGGVRLELSKALNLWARNSRLTFREVNS-DRADILIYFHRGYHGDGYPFDGRGQILAH 72
Query: 142 SFSP---ESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMY 198
+F P G H D E W + + + L +VA HE GH LGL HS V+ A+MY
Sbjct: 73 AFFPGKDRGGDAHFDEEEIWLLQ--DDTNEEGTSLFAVAAHEFGHSLGLAHSSVQGALMY 130
Query: 199 PTLKPRDKKVDLALDDIQGVQALYGSN 225
P + L DD G+Q +YG
Sbjct: 131 PWYQGLSPNYKLPEDDRHGIQQMYGGE 157
>gi|311258321|ref|XP_003127551.1| PREDICTED: matrix metalloproteinase-23-like [Sus scrofa]
Length = 393
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE 108
++ Y L P + RW H +T N+++ ++ + AF W+ V P SF E
Sbjct: 79 RRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PSETRRGLAAAFRMWSDVSPFSFRE 134
Query: 109 TDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD- 161
+D+RIGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 135 VAPEQPSDLRIGFYPVNHTDCLVSPLHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGP 194
Query: 162 --FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQ 219
+ +K DL VA HEIGH LGL HS A+M+ R K L+ D++ G+
Sbjct: 195 TRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQDELWGLH 253
Query: 220 ALYGS 224
LYG
Sbjct: 254 RLYGC 258
>gi|384941724|gb|AFI34467.1| matrix metalloproteinase-23 precursor [Macaca mulatta]
Length = 390
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>gi|189520793|ref|XP_699803.3| PREDICTED: matrix metalloproteinase-24 [Danio rerio]
Length = 608
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET------DDYDFADIRIGFYNGD 125
+S N + D + ++AF W +V P+SF E ++ ADI I F +G
Sbjct: 131 TYSIHNFTPKVGEKDTQRAIRQAFDVWQTVTPLSFQEVAYSEIKNEGKEADIMIFFASGF 190
Query: 126 HGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIG 182
HGD PFDG G LAH++ P G H D+ E W + + DL VAVHE+G
Sbjct: 191 HGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNANHD---GNDLFLVAVHELG 247
Query: 183 HLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
H LGL HS A+M P + + L LDD+QG+Q +YG
Sbjct: 248 HALGLEHSSDPSAIMAPFYQYMETHNFKLPLDDLQGIQKIYG 289
>gi|410971827|ref|XP_003992364.1| PREDICTED: matrix metalloproteinase-27 [Felis catus]
Length = 583
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 59 PRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P W RH L+Y ++NY + D+ + W+ V P++F +T A
Sbjct: 104 PGWRRH---NLTY-----RIVNYTPDMSRADVDEAIRNGLEVWSRVTPLTFTKTSR-GIA 154
Query: 116 DIRIGFYNGDHGDG-EPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
DI I F HG FDG LGVL H+F P G H D E W K
Sbjct: 155 DIMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDENWT------KDGAGF 208
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS + A+M+P D K L+ DDI G+Q++YGS P
Sbjct: 209 NLFLVAAHEFGHALGLSHSNDQTALMFPNYVSLDPNKYPLSQDDINGIQSIYGSLP 264
>gi|198460006|ref|XP_002138767.1| GA24215 [Drosophila pseudoobscura pseudoobscura]
gi|198136874|gb|EDY69325.1| GA24215 [Drosophila pseudoobscura pseudoobscura]
Length = 713
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+ YVL P+W++ L+++ + M + I+ + RA + W + ++F E
Sbjct: 153 RRYVL--QGPKWSK---TDLTWSLVNQTMPD---AGKIRMMVSRALNVWENNSKLTFREV 204
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEK 166
D ADI++ F HGDG FDG VLAH+F P G+ H DA E W D G+
Sbjct: 205 YS-DQADIQVLFARLQHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADEIWNFD-GNAD 262
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +VA+HE+GH LGL HS +AVM+P + + L DD G+Q LYGS
Sbjct: 263 DSRGTNFLNVALHELGHSLGLGHSSDSDAVMFPWYQNNEVDGKLPDDDRTGIQELYGS 320
>gi|268570753|ref|XP_002640828.1| Hypothetical protein CBG15715 [Caenorhabditis briggsae]
Length = 190
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 87 IKAVFKRAFSKWASVIP--VSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
++ + +F+KWA + + F E D A+IR+ F +H E FDG GV+AHS
Sbjct: 48 VRRTVQESFAKWAIALENLMEFEEILDDQEANIRVFFAKKNHSCYEEFDGKGGVVAHSMY 107
Query: 145 PESGKFHLDAAETW-AVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL-K 202
P G HLD E W A D E +DL V +HEIGH LGL HS K +VM K
Sbjct: 108 PPFGVLHLDGDEQWYATDENEEMDQRVIDLRMVLIHEIGHTLGLRHSRRKASVMRKHYEK 167
Query: 203 PRD-KKVDLALDDIQGVQALYGS 224
P++ K+ L+ D++ ++ LYGS
Sbjct: 168 PKNPHKIRLSKYDVRAIRELYGS 190
>gi|395814632|ref|XP_003780849.1| PREDICTED: stromelysin-2 [Otolemur garnettii]
Length = 476
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSF 106
+ + FPG P+W + L+Y ++NY L + + +RA W V P++F
Sbjct: 97 RHFSTFPGMPKWRK---THLTY-----RIVNYTPDLPRDAVDSAIERALKVWEEVTPLTF 148
Query: 107 IETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFG 163
+ + ADI I F G+HGD FDG LAH++ P G + H D E W D
Sbjct: 149 SRVYEGE-ADIMISFAVGEHGDFLSFDGPGESLAHAYPPGPGVYGDVHFDDDEKWTEDAS 207
Query: 164 SEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQAL 221
+L VA HE+GH LGL HS EA+MYP + L+ DD+ G+Q+L
Sbjct: 208 ------GTNLFLVAAHELGHSLGLFHSANTEALMYPVYNSLTDLARFRLSQDDVDGIQSL 261
Query: 222 YGSNP 226
YG P
Sbjct: 262 YGPPP 266
>gi|410929189|ref|XP_003977982.1| PREDICTED: matrix metalloproteinase-14-like [Takifugu rubripes]
Length = 536
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 19/166 (11%)
Query: 72 AFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIE---------TDDYDFADIRIGFY 122
FS EN + ++AF W SVIP++F E D Y ADI + F
Sbjct: 92 TFSIENYTPKVGERATYEAIRKAFRVWESVIPITFREIPYSQIRNKVDKY--ADIMLSFS 149
Query: 123 NGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVH 179
G HGD PFDG G LAH+F P + G H D AE W V G+++ D+ V VH
Sbjct: 150 EGFHGDSTPFDGEGGFLAHAFFPGNAIGGDTHFDLAEPWTV--GADQG--GNDVFLVTVH 205
Query: 180 EIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS 224
E+GH LGL HS A+M P + + L DD +G+QA+YGS
Sbjct: 206 ELGHALGLEHSNDPSAIMAPFYQWFETENFHLPDDDRRGIQAIYGS 251
>gi|9955201|pdb|1C8T|A Chain A, Human Stromelysin-1 (E202q) Catalytic Domain Complexed
With Ro-26-2812
gi|9955202|pdb|1C8T|B Chain B, Human Stromelysin-1 (E202q) Catalytic Domain Complexed
With Ro-26-2812
Length = 167
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 1 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 52
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 53 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 105
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYGSNP 226
+L VA H+IGH LGL HS EA+MYP + L+ DDI G+Q+LYG P
Sbjct: 106 TGTNLFLVAAHQIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPPP 165
Query: 227 N 227
+
Sbjct: 166 D 166
>gi|301752966|ref|XP_002912340.1| PREDICTED: matrix metalloproteinase-15-like [Ailuropoda
melanoleuca]
Length = 648
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K WT H FS +N L +RAF W
Sbjct: 111 ANLRRRRKRYALTGRK--WTNH-----HLTFSIQNYTEKLGWYHSLEAVRRAFRVWEQAT 163
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 164 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 223
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLA 211
DA E W S L VAVHE+GH LGL HS A+M P + D L
Sbjct: 224 DADEPWTF---SSTDLHGNSLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDTFQLP 280
Query: 212 LDDIQGVQALYGSNPNFTI 230
DD++G+Q LYG +F +
Sbjct: 281 EDDLRGIQQLYGEPADFPL 299
>gi|195153621|ref|XP_002017723.1| GL17329 [Drosophila persimilis]
gi|194113519|gb|EDW35562.1| GL17329 [Drosophila persimilis]
Length = 711
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 50 KDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIET 109
+ YVL P+W++ L+++ + M + I+ + RA + W + ++F E
Sbjct: 153 RRYVL--QGPKWSK---TDLTWSLVNQTMPD---AGKIRMMVSRALNVWENNSKLTFREV 204
Query: 110 DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLDAAETWAVDFGSEK 166
D ADI++ F HGDG FDG VLAH+F P G+ H DA E W D G+
Sbjct: 205 YS-DQADIQVLFARLQHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADEIWNFD-GNAD 262
Query: 167 SPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS 224
+ +VA+HE+GH LGL HS +AVM+P + + L DD G+Q LYGS
Sbjct: 263 DSRGTNFLNVALHELGHSLGLGHSSDSDAVMFPWYQNNEVDGKLPDDDRTGIQELYGS 320
>gi|395517586|ref|XP_003762956.1| PREDICTED: stromelysin-3, partial [Sarcophilus harrisii]
Length = 346
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 77/142 (54%), Gaps = 10/142 (7%)
Query: 86 DIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
++ + A W+SV P++F E + ADI I F HGD PFDG G+LAH+F P
Sbjct: 48 QVRQMMAEALGVWSSVTPLTFTEVQE-GRADIMIDFTRYRHGDNLPFDGPGGILAHAFFP 106
Query: 146 ES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
++ G H D ETW + + + DL VA HE GH+LGL HS +A+M P
Sbjct: 107 KTHREGDVHFDYDETWTIG-----NNLGTDLLQVAAHEFGHVLGLQHSTEAKALMSPFYT 161
Query: 203 PRDKKVDLALDDIQGVQALYGS 224
R + L+ DD +G+Q LYG
Sbjct: 162 FR-YPLSLSPDDRRGIQHLYGQ 182
>gi|327291129|ref|XP_003230274.1| PREDICTED: matrix metalloproteinase-15-like, partial [Anolis
carolinensis]
Length = 404
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 44 EATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIP 103
+A +K Y L G+ RWT+ FS +N L + + +RAF W P
Sbjct: 114 KANMRRKRYAL-TGR-RWTQS-----QLTFSIQNHTEKLGRSASQEAIRRAFRVWEEATP 166
Query: 104 VSFIETD-DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWA 159
+SF E AD+ + F +G HGD PFDG G LAH+F P G H D E W
Sbjct: 167 LSFREVSFSGTEADLVVLFASGFHGDSSPFDGAGGFLAHAFFPGPGMGGDAHFDLDEPWT 226
Query: 160 VDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGV 218
++ +L VAVHE+GH LGL HS A+M P + D + L DD++G+
Sbjct: 227 LE---NVDGAGNNLFLVAVHELGHSLGLEHSSHPSAIMAPFYQWMDTQAFRLPDDDLRGI 283
Query: 219 QALYG 223
Q LYG
Sbjct: 284 QQLYG 288
>gi|157834101|pdb|1USN|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Fibroblast Stromelysin-1 Inhibited With Thiadiazole
Inhibitor Pnu-142372
gi|157836402|pdb|2USN|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Fibroblast Stromelysin-1 Inhibited With Thiadiazole
Inhibitor Pnu-141803
Length = 165
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 165
>gi|148692991|gb|EDL24938.1| matrix metallopeptidase 27 [Mus musculus]
Length = 511
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 59 PRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P W ++ +L+Y ++NY + D+ ++A W+ V P++F A
Sbjct: 104 PGWRKY---SLTY-----RIMNYTPDMTPADVDEAIQKALQVWSKVTPLTFTRISK-GVA 154
Query: 116 DIRIGFYNGDHG-DGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAV 171
DI I F G HG FDG LGVL H+F P G H D ETW G
Sbjct: 155 DIMIAFRTGVHGWCPRHFDGPLGVLGHAFPPGLGLGGDTHFDEDETWIAKDGE-----GF 209
Query: 172 DLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNPNFT 229
+L VA HE GH LGL+HS + A+M+P D K L+ DDI G+Q++YGS P T
Sbjct: 210 NLFLVAAHEFGHSLGLSHSNDQTALMFPNYISLDPSKYPLSQDDIDGIQSIYGSPPKVT 268
>gi|301779359|ref|XP_002925110.1| PREDICTED: stromelysin-3-like [Ailuropoda melanoleuca]
Length = 467
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
D D A +K +VL G RW + L+Y + L ++ A
Sbjct: 57 DPPDGQSARNRQKRFVLSGG--RWEK---TDLTYRILR--FPWQLVREQVRQTVAEALQV 109
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDA 154
W+ V P++F E + ADI I F HGD PFDG G+LAH+F P++ G H D
Sbjct: 110 WSEVTPLTFTEVHE-GHADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDY 168
Query: 155 AETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
ETW + G+ + DL VA HE GH+LGL H+P +A+M P R + L+ DD
Sbjct: 169 DETWTI--GNNQ---GTDLLQVAAHEFGHVLGLQHTPAAKALMSPFYTFR-YPLSLSPDD 222
Query: 215 IQGVQALYG 223
+G+Q LYG
Sbjct: 223 RRGIQHLYG 231
>gi|326664684|ref|XP_700781.5| PREDICTED: matrix metalloproteinase-16 [Danio rerio]
Length = 589
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTR-HVPMTLSYAFSKENMINYLHITDIKAVFKRAFS 96
D+ A+R KK Y L K W R H+ ++S +N+ + + +RAF
Sbjct: 77 DQLKAGSASRRKKRYALTGQK--WQREHI------SYSIKNVTPKVGNQETHDAIRRAFD 128
Query: 97 KWASVIPVSF--IETDDYDFA----DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---S 147
W V P+ F + D D DI I F +G HGD PFDG G LAH++ P
Sbjct: 129 VWQGVTPLRFEAVPFRDLDSGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIG 188
Query: 148 GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-K 206
G H D+ E W + + DL VAVHE+GH LGL HS A+M P + D +
Sbjct: 189 GDTHFDSDEPWTL---GNPNHDGNDLFLVAVHELGHALGLEHSSDPTAIMAPFYQYMDTE 245
Query: 207 KVDLALDDIQGVQALYG---SNPNFT 229
L DD+QG+Q +YG NP T
Sbjct: 246 SFKLPHDDLQGIQKIYGPPNKNPQPT 271
>gi|410989938|ref|XP_004001209.1| PREDICTED: matrix metalloproteinase-23 [Felis catus]
Length = 402
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLS-YAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFI 107
++ Y L P + RW H +T +F + N L ++ + AF W+ V P SF
Sbjct: 88 RRRYTLTPARLRWD-HFNLTYRILSFPR----NLLSPSETRRGLATAFRMWSDVSPFSFR 142
Query: 108 ETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
E +D+RIGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 143 EVAPEQPSDLRIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLG 202
Query: 162 ---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
+ +K DL VA HEIGH LGL HS A+M+ R K L+ D++ G+
Sbjct: 203 PTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKT-LSQDELWGL 261
Query: 219 QALYGS 224
LYG
Sbjct: 262 HRLYGC 267
>gi|157423149|gb|AAI53751.1| LOC100127631 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 94 AFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLD 153
F W+ V P++F E ADIRI F+ +G PFDG VLAH+ PE G H D
Sbjct: 143 GFKYWSDVTPLTFKEVTR-GRADIRISFHRRGNGCSRPFDGPGKVLAHADIPELGTVHFD 201
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALD 213
E W +E + V+L +A HE+GH LGL HS + A+M P L D
Sbjct: 202 EDELW-----TEGTYEGVNLRIIAAHELGHALGLGHSRFRSALMAPIYFGYKPNFRLHDD 256
Query: 214 DIQGVQALYG 223
D++G+QALYG
Sbjct: 257 DVKGIQALYG 266
>gi|363740125|ref|XP_001232777.2| PREDICTED: stromelysin-3 [Gallus gallus]
Length = 484
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 16/166 (9%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFS 144
+ ++ + A W+ V P++F E + ADI I F HGD PFDG G+LAH+F
Sbjct: 122 SKVRRTIEEALKVWSDVTPLTFTEVQE-GRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 180
Query: 145 PES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTL 201
P++ G H D ETW + + + DL VA HE GH+LGL H+ V +++M P
Sbjct: 181 PKTHREGDVHFDYDETWTI-----GNNLGTDLLQVAAHEFGHVLGLQHTTVSKSLMSPFY 235
Query: 202 KPRDKKVDLALDDIQGVQALYGS---NPNFT---IGSLVESDISTN 241
R + L+ DD QG+Q LYG +P+ T L + D+ TN
Sbjct: 236 IFR-YPLSLSEDDKQGIQYLYGKPKLDPDPTPTQPAELPQPDLETN 280
>gi|355756825|gb|EHH60433.1| Matrix metalloproteinase-15 [Macaca fascicularis]
Length = 570
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K W H FS +N L +RAF W
Sbjct: 54 ANLRRRRKRYALTGRK--WNNH-----HLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQAT 106
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 107 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 166
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 167 DADEPWTF---SSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLP 223
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 224 EDDLRGIQQLYGT 236
>gi|260818324|ref|XP_002604333.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
gi|229289659|gb|EEN60344.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
Length = 524
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 76 ENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRI--GFYNGDHGDGEPFD 133
EN YL +++ + AF W+ P++F E D D D+ I F +GDHGD PFD
Sbjct: 153 ENFTPYLTEQEVRDTVRTAFGVWSDYTPLTFSEVRDRDRTDVDILVEFTSGDHGDNSPFD 212
Query: 134 G--VLGV-----LAHSFSPE--------SGKFHLDAAETWAVDFGSEKSPVAVDLESVAV 178
G V G LAH+F P G H D E W ++ + V+L VA+
Sbjct: 213 GRYVPGTGRGQNLAHAFQPPRDSHSYRIDGDSHFDGDEEWTLN-----TDRGVNLLIVAI 267
Query: 179 HEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS----NPNFTIGSLV 234
HE GH LG++H+P A+M+P +++ + DD +Q LYG+ NP + ++
Sbjct: 268 HEFGHALGISHTPTLGAIMFPAYVYQEEPC-IHPDDKAAIQELYGAQEVPNPTLPMCTIA 326
Query: 235 ESDISTN-LAVDLRIKSSM 252
+T LR + +
Sbjct: 327 PEKCNTREFDATLRFRGEL 345
>gi|6137649|pdb|1B8Y|A Chain A, X-Ray Structure Of Human Stromelysin Catalytic Domain
Complexed With Non-Peptide Inhibitors: Implications For
Inhibitor Selectivity
gi|340707741|pdb|3OHL|A Chain A, Catalytic Domain Of Stromelysin-1 In Complex With
N-Hydroxy-2-(4-
Methoxy-N-(Pyridine-3-
Ylmethyl)phenylsulfonamido)acetamide
Length = 167
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 55 FPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIETDD 111
FPG P+W + L+Y ++NY L + + ++A W V P++F +
Sbjct: 4 FPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYE 55
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
+ ADI I F +HGD PFDG VLAH+++P +G H D E W K
Sbjct: 56 GE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------KDT 108
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 109 TGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 165
>gi|198425375|ref|XP_002129638.1| PREDICTED: similar to matrix metalloproteinase e [Ciona
intestinalis]
Length = 754
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 85 TDIKAVFKRAFSKWASVIPVSFIET--DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
TDI+ A W V F AD+ I F DHGD PFDG LAH+
Sbjct: 128 TDIEKGITAAMCLWEMNSNVRFTGNLGPGVSSADVTISFGRRDHGDPYPFDGKGKTLAHA 187
Query: 143 FSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP--T 200
F PESGK H D E W + + D+ +VA HE+GH LGL HS V+ ++M P
Sbjct: 188 FYPESGKLHFDLDEPWFLSMNNNNQRRKKDIFTVAAHELGHTLGLAHSEVRGSLMAPYYL 247
Query: 201 LKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESD 237
+ L DD G+Q++YG IGS+ +D
Sbjct: 248 FTTSFENYLLPRDDTLGIQSMYGRR----IGSVALND 280
>gi|426242001|ref|XP_004014867.1| PREDICTED: matrix metalloproteinase-24 [Ovis aries]
Length = 575
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
+ RHK+ Y L K R +H+ +S N + D + ++AF W V
Sbjct: 76 SRRRRHKR-YALTGQKWR-QKHI------TYSIHNYTPKVGELDTRKAIRQAFDVWQKVT 127
Query: 103 PVSFIET------DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLD 153
P++F E D ADI I F +G HGD PFDG G LAH++ P G H D
Sbjct: 128 PLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFD 187
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLAL 212
+ E W + + DL VAVHE+GH LGL HS A+M P + + + L
Sbjct: 188 SDEPWTLGNANHD---GNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETRNFKLPQ 244
Query: 213 DDIQGVQALYG 223
DD+QGVQ +YG
Sbjct: 245 DDLQGVQKIYG 255
>gi|410980554|ref|XP_003996642.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28 [Felis
catus]
Length = 535
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 150 NWPQHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATVPADIRLTFFQGDHNDGLGNAFDG 209
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGL HSP
Sbjct: 210 PGGALAHAFLPRRGEAHFDRDERWSLSRRRGR-----NLFVVLAHEIGHTLGLAHSPAPR 264
Query: 195 AVMYPTLKPRDKKVDL 210
A+M P KP+ + L
Sbjct: 265 ALMAPYYKPKGRSXAL 280
>gi|195120101|ref|XP_002004567.1| GI19538 [Drosophila mojavensis]
gi|193909635|gb|EDW08502.1| GI19538 [Drosophila mojavensis]
Length = 588
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 68 TLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHG 127
L+Y SK L D+ A RAF+ W+ ++F I I F +HG
Sbjct: 123 NLTYKISK--YPKRLKRNDVDAEIARAFAVWSEDTDLTFTRKTSGP-VHIEIKFVESEHG 179
Query: 128 DGEPFDGVLGVLAHSFSPE-SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLG 186
DG+PFDG G LAH+F P G H D AE W + SP +L VA HE GH LG
Sbjct: 180 DGDPFDGQGGTLAHAFFPVFGGDAHFDDAELWTIG-----SPRGTNLFQVAAHEFGHSLG 234
Query: 187 LTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
L+HS A+M P + + L DD +Q+LYG N
Sbjct: 235 LSHSDQSSALMAPFYRGFEPVFKLDEDDKAAIQSLYGRKTN 275
>gi|281343872|gb|EFB19456.1| hypothetical protein PANDA_014527 [Ailuropoda melanoleuca]
Length = 446
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 38 DKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSK 97
D D A +K +VL G RW + L+Y + L ++ A
Sbjct: 45 DPPDGQSARNRQKRFVLSGG--RWEK---TDLTYRILR--FPWQLVREQVRQTVAEALQV 97
Query: 98 WASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDA 154
W+ V P++F E + ADI I F HGD PFDG G+LAH+F P++ G H D
Sbjct: 98 WSEVTPLTFTEVHE-GHADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVHFDY 156
Query: 155 AETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDD 214
ETW + G+ + DL VA HE GH+LGL H+P +A+M P R + L+ DD
Sbjct: 157 DETWTI--GNNQ---GTDLLQVAAHEFGHVLGLQHTPAAKALMSPFYTFR-YPLSLSPDD 210
Query: 215 IQGVQALYG 223
+G+Q LYG
Sbjct: 211 RRGIQHLYG 219
>gi|351709968|gb|EHB12887.1| Stromelysin-1 [Heterocephalus glaber]
Length = 471
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FP P+W ++ L+Y +++Y L ++ ++A W V P++F
Sbjct: 100 FSTFPDMPKWRKN---HLTY-----RIVSYTQDLPRDEVDFAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W D
Sbjct: 152 IHEGE-ADIMISFVFREHGDFIPFDGPGSVLAHAYAPGPGINGDAHFDDDELWTRD---- 206
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP + L+ DD+ G+Q+LYG
Sbjct: 207 --TTGTNLFLVAAHELGHSLGLFHSANTEALMYPVYNSFTDLTRFRLSQDDVDGIQSLYG 264
Query: 224 SNPNFTIGSLVESDISTNLAVD 245
P +V ++ T A D
Sbjct: 265 PPPPSAGDHVVPTESGTPAACD 286
>gi|426382395|ref|XP_004057791.1| PREDICTED: matrix metalloproteinase-15 [Gorilla gorilla gorilla]
Length = 638
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K W H FS +N L +RAF W
Sbjct: 123 ANLRRRRKRYALTGRK--WNNH-----HLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQAT 175
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 176 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 235
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 236 DADEPWTF---SSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLP 292
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 293 EDDLRGIQQLYGT 305
>gi|301620474|ref|XP_002939595.1| PREDICTED: matrix metalloproteinase-19 [Xenopus (Silurana)
tropicalis]
Length = 573
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 59 PRWTRHVPMTLSYAFS---KENMINY--LHITD------IKAVFKRAFSKWASVIPVSFI 107
PR +H +SY K++M+ Y L+ T +K +A W V + F+
Sbjct: 136 PRCGKH-EQRMSYNLGSKWKKDMLTYKILNTTAQLPEKMVKDELSKALKVWQDVSSLKFV 194
Query: 108 ETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPE--------SGKFHLDAAET 157
E ADI + F +G H DG FDG VL H+F P G HLD E
Sbjct: 195 EVGINATADIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDNDEK 254
Query: 158 WAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQG 217
W ++ EK V+L A HE+GH LGL HS V A+M PT K + K L DDIQ
Sbjct: 255 WTIN---EKK--GVNLLQAAAHELGHALGLDHSTVTGALMAPTYKGYNPKFQLHEDDIQA 309
Query: 218 VQALYG 223
+QALYG
Sbjct: 310 IQALYG 315
>gi|160773895|gb|AAI55488.1| LOC100127856 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 59 PRWTRHVPMTLSYAFS---KENMINY--LHITD------IKAVFKRAFSKWASVIPVSFI 107
PR +H +SY K++M+ Y L+ T +K +A W V + F+
Sbjct: 122 PRCGKH-EQRMSYNLGSKWKKDMLTYKILNTTAQLPEKMVKDELSKALKVWQDVSSLKFV 180
Query: 108 ETDDYDFADIRIGFYNGDHGDG--EPFDGVLGVLAHSFSPE--------SGKFHLDAAET 157
E ADI + F +G H DG FDG VL H+F P G HLD E
Sbjct: 181 EVGINATADIDMFFVSGLHNDGIKNAFDGPGRVLGHAFMPPFSKNKKDIDGDLHLDNDEK 240
Query: 158 WAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQG 217
W ++ EK V+L A HE+GH LGL HS V A+M PT K + K L DDIQ
Sbjct: 241 WTIN---EKK--GVNLLQAAAHELGHALGLDHSTVTGALMAPTYKGYNPKFQLHEDDIQA 295
Query: 218 VQALYG 223
+QALYG
Sbjct: 296 IQALYG 301
>gi|16758396|ref|NP_446058.1| matrix metalloproteinase-23 [Rattus norvegicus]
gi|81882179|sp|O88272.1|MMP23_RAT RecName: Full=Matrix metalloproteinase-23; Short=MMP-23; AltName:
Full=metalloprotease in the female reproductive tract;
Short=MIFR; Contains: RecName: Full=Matrix
metalloproteinase-23, soluble form; Flags: Precursor
gi|2879941|dbj|BAA24832.1| MIFR [Rattus norvegicus]
gi|55824684|gb|AAH86586.1| Matrix metallopeptidase 23 [Rattus norvegicus]
gi|149024817|gb|EDL81314.1| matrix metallopeptidase 23 [Rattus norvegicus]
Length = 391
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLS-YAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFI 107
++ Y L P + RW H +T +F + N L + + AF W+ V P SF
Sbjct: 77 RRRYTLTPARLRWD-HFNLTYRILSFPR----NLLSPEETRRGLAAAFRMWSDVSPFSFR 131
Query: 108 ETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
E +D++IGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 132 EVAPERPSDLKIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLG 191
Query: 162 ---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
+ +K DL VA HEIGH LGL HS +A+M+ R K L+ D++ G+
Sbjct: 192 PTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQQDQALMHLNATLRGWKA-LSQDELWGL 250
Query: 219 QALYGS 224
LYG
Sbjct: 251 HRLYGC 256
>gi|260808835|ref|XP_002599212.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
gi|229284489|gb|EEN55224.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
Length = 158
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 86 DIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP 145
++ +R W++V P+ F +T Y +DI + F HGD +P DG G LAH+F P
Sbjct: 22 EVDDAVRRGLQVWSNVTPLVFEKTSAY--SDIEMSFEKYGHGDEDPLDGPGGTLAHAFFP 79
Query: 146 E---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK 202
G H D +ETW V S + + +L VA HE+GH LGL HS V+ ++M+P +
Sbjct: 80 GPGIGGDVHFDDSETWTVR--SFRGGLRTNLFIVAAHELGHSLGLDHSDVRGSLMFPIYQ 137
Query: 203 PRDKKVDLALDDIQGVQALYG 223
L DDI+ +Q LYG
Sbjct: 138 GYTPNFKLHKDDIKRIQNLYG 158
>gi|449477478|ref|XP_002196904.2| PREDICTED: stromelysin-3 [Taeniopygia guttata]
Length = 723
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 16/171 (9%)
Query: 87 IKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE 146
++ + A W+ V P++F E + ADI I F HGD PFDG G+LAH+F P+
Sbjct: 214 VRRTIEEALKVWSDVTPLTFTEVQE-GRADIVIDFTRYWHGDNLPFDGPGGILAHAFFPK 272
Query: 147 S---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKP 203
+ G H D ETW + + + DL VA HE GH+LGL H+ V +++M P
Sbjct: 273 THREGDVHFDYDETWTIG-----NSLGTDLLQVAAHEFGHVLGLQHTAVSKSLMSPFYIF 327
Query: 204 RDKKVDLALDDIQGVQALYGS-----NPNFT-IGSLVESDISTNLAVDLRI 248
R + L+ DD QG+Q LYG +P T L + D+ TN ++ +
Sbjct: 328 R-YPLSLSEDDKQGIQYLYGKPSPAPDPTPTQPAELPQPDLETNEITNVEM 377
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 170 AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGS----- 224
DL VA HE GH+LGL H+ V +++M P R + L+ DD QG+Q LYG
Sbjct: 380 GTDLLQVAAHEFGHVLGLQHTAVSKSLMSPFYIFR-YPLSLSEDDKQGIQYLYGKPSPAP 438
Query: 225 NPNFT-IGSLVESDISTNLAVDLRIKSSMW 253
+P T L + D+ TN + ++S W
Sbjct: 439 DPTPTQPAELPQPDLETNEITN--VESQYW 466
>gi|30584797|gb|AAP36651.1| Homo sapiens matrix metalloproteinase 15 (membrane-inserted)
[synthetic construct]
Length = 565
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K W H FS +N L +RAF W
Sbjct: 18 ANLRRRRKRYALTGRK--WNNH-----HLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQAT 70
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 71 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 130
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 131 DADEPWTF---SSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLP 187
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 188 EDDLRGIQQLYGT 200
>gi|403297727|ref|XP_003939704.1| PREDICTED: matrix metalloproteinase-23 [Saimiri boliviensis
boliviensis]
Length = 545
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLS-YAFSKENMINYLHITDIKAVFKRAFSKWAS 100
P ++ Y L P + RW H +T +F + N L + + AF W+
Sbjct: 224 PGSLPPRRRRYTLTPARLRWD-HFNLTYRILSFPR----NLLSPRETRRALAAAFRMWSD 278
Query: 101 VIPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDA 154
V P SF E +D+RIGFY +H D FDG G LAH+F P G H D
Sbjct: 279 VSPFSFREVAPEQPSDLRIGFYPINHTDCLVSTLHHCFDGPTGELAHAFFPPHGGIHFDD 338
Query: 155 AETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLA 211
+E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 339 SEYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LS 397
Query: 212 LDDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 398 QDELWGLHRLYGC 410
>gi|355710248|gb|EHH31712.1| Matrix metalloproteinase-15, partial [Macaca mulatta]
Length = 644
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K W H FS +N L +RAF W
Sbjct: 98 ANLRRRRKRYALTGRK--WNNH-----HLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQAT 150
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 151 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 210
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 211 DADEPWTF---SSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLP 267
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 268 EDDLRGIQQLYGT 280
>gi|1418215|dbj|BAA13071.1| matrix metalloproteinase, MT2MMP [Homo sapiens]
gi|30582269|gb|AAP35361.1| matrix metalloproteinase 15 (membrane-inserted) [Homo sapiens]
Length = 564
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K W H FS +N L +RAF W
Sbjct: 18 ANLRRRRKRYALTGRK--WNNH-----HLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQAT 70
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 71 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 130
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 131 DADEPWTF---SSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLP 187
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 188 EDDLRGIQQLYGT 200
>gi|348519240|ref|XP_003447139.1| PREDICTED: matrix metalloproteinase-15-like [Oreochromis niloticus]
Length = 760
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 23 CIAVRSTPKFKLKQSDKYDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
+A P+ L D + +R KK YVL G+ RW + ++Y+ +NM L
Sbjct: 131 TLAAMRRPRCGLPDRKPEDLVDRSR-KKRYVLT-GQ-RWDKD---HITYSIMDQNMPRSL 184
Query: 83 HITDIKAVFKRAFSKWASVIPVSF--------IETDDYDFADIRIGFYNGDHGDGEPFDG 134
++AF W V P++F + ADI + F +G HGD FDG
Sbjct: 185 GEERTYDAIRKAFGVWRRVTPLTFEELPPGNGVNGSQTKLADILLLFASGFHGDMSLFDG 244
Query: 135 VLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
G LAH++ P G H D+ E W +D ++P +DL VAVHE+GH LGL HS
Sbjct: 245 EGGSLAHAYYPGPGIGGDTHFDSDEPWTLD---NENPKGIDLFLVAVHELGHALGLEHSD 301
Query: 192 VKEAVMYPTLK-PRDKKVDLALDDIQGVQALYG 223
A M P + + L DDI+G+Q +YG
Sbjct: 302 NPRATMAPFYQWVHTQNFTLHEDDIRGIQYIYG 334
>gi|326671556|ref|XP_003199461.1| PREDICTED: matrix metalloproteinase-19-like [Danio rerio]
Length = 417
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 88 KAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES 147
+ + AF W+ V P+SF E + ADIRI F+ D G PFDG VLAH+ +P S
Sbjct: 72 QTAIRTAFKYWSDVTPLSFTEIH-FGTADIRISFHKRD-GCPSPFDGPGHVLAHAEAPPS 129
Query: 148 GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK 207
G H D E W +E +L VA HEIGH LGL HS A+M
Sbjct: 130 GIVHFDEDEFW-----TEGKYYGSNLRIVAAHEIGHALGLGHSQYSSALMAAHYTGYQVN 184
Query: 208 VDLALDDIQGVQALYG 223
L +DDI+G+QA+YG
Sbjct: 185 FRLHIDDIRGIQAIYG 200
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,386,535,106
Number of Sequences: 23463169
Number of extensions: 193408236
Number of successful extensions: 519084
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 518
Number of HSP's that attempted gapping in prelim test: 512247
Number of HSP's gapped (non-prelim): 2774
length of query: 261
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 122
effective length of database: 9,097,814,876
effective search space: 1109933414872
effective search space used: 1109933414872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)