BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043639
(261 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29136|MEP1_SOYBN Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2
Length = 305
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 111/178 (62%), Gaps = 7/178 (3%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
DY F PRW L+YAFS E ++ K+ RAFSKW V+ ++F ET
Sbjct: 133 DYTFFKDMPRWQAGT-TQLTYAFSPEPRLD----DTFKSAIARAFSKWTPVVNIAFQETT 187
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPV- 169
Y+ A+I+I F + +HGD PFDG G+L H+F+P G+ H DA E W KSPV
Sbjct: 188 SYETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVT 247
Query: 170 -AVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNP 226
A DLESVAVHEIGHLLGL HS A+MYP++ PR +KV+LA DDI G++ LYG NP
Sbjct: 248 SAFDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLYGINP 305
>sp|P22757|HE_PARLI Hatching enzyme OS=Paracentrotus lividus PE=1 SV=1
Length = 587
Score = 127 bits (319), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 94/165 (56%), Gaps = 9/165 (5%)
Query: 61 WTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIG 120
W+R+ P+T S+ + + L+ D+K +RAF W V +SF E D DIRI
Sbjct: 174 WSRNQPVTYSFG----ALTSDLNQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIK 229
Query: 121 FYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHE 180
F + DHGDG FDG GVLAH+F P +G H D +ETW +E + +L VA HE
Sbjct: 230 FGSYDHGDGISFDGRGGVLAHAFLPRNGDAHFDDSETW-----TEGTRSGTNLFQVAAHE 284
Query: 181 IGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
GH LGL HS V+ A+MYP + L DDI G+++LYGSN
Sbjct: 285 FGHSLGLYHSTVRSALMYPYYQGYVPNFRLDNDDIAGIRSLYGSN 329
>sp|P79287|MMP20_PIG Matrix metalloproteinase-20 OS=Sus scrofa GN=MMP20 PE=2 SV=1
Length = 483
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDKAMEMALQAWSSAVPLSFVRVN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGMN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYQNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NFT 229
FT
Sbjct: 275 TFT 277
>sp|O60882|MMP20_HUMAN Matrix metalloproteinase-20 OS=Homo sapiens GN=MMP20 PE=1 SV=3
Length = 483
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P+SF+ +
Sbjct: 107 NYRLFPGEPKWKKN---TLTYRISK--YTPSMSSVEVDKAVEMALQAWSSAVPLSFVRIN 161
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F NGDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 162 SGE-ADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 216
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+MYPT K ++ L DD++G+QALYG
Sbjct: 217 --GFNLFTVAAHEFGHALGLAHSTDPSALMYPTYKYKNPYGFHLPKDDVKGIQALYGPRK 274
Query: 227 NF 228
F
Sbjct: 275 VF 276
>sp|P91953|HE_HEMPU 50 kDa hatching enzyme OS=Hemicentrotus pulcherrimus PE=1 SV=1
Length = 591
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 57 GKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFAD 116
G W R+V +T S+ + N L T IK +RAF W V ++F E D D
Sbjct: 173 GGIAWPRNVAVTYSFG----TLSNDLSQTAIKNELRRAFQVWDDVSSLTFREVVDSSSVD 228
Query: 117 IRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESV 176
IRI F + +HGDG FDG GVLAH+F P +G H D +E W + S +L V
Sbjct: 229 IRIKFGSYEHGDGISFDGQGGVLAHAFLPRNGDAHFDDSERWTIGTNS-----GTNLFQV 283
Query: 177 AVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSN 225
A HE GH LGL HS V+ A+MYP + + +L DDI G+ +LYG N
Sbjct: 284 AAHEFGHSLGLYHSDVQSALMYPYYRGYNPNFNLDRDDIAGITSLYGRN 332
>sp|P57748|MMP20_MOUSE Matrix metalloproteinase-20 OS=Mus musculus GN=Mmp20 PE=2 SV=1
Length = 482
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 16/177 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W +++ L+Y SK + T++ + A W++ +P++F+ +
Sbjct: 106 NYRLFPGEPKWKKNI---LTYRISK--YTPSMSPTEVDKAIQMALHAWSTAVPLNFVRIN 160
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W + G+
Sbjct: 161 SGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTM--GTN-- 215
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYG 223
+L +VA HE GH LGL HS A+MYPT K ++ + L DD++G+QALYG
Sbjct: 216 --GFNLFTVAAHEFGHALGLGHSTDPSALMYPTYKYQNPYRFHLPKDDVKGIQALYG 270
>sp|O18767|MMP20_BOVIN Matrix metalloproteinase-20 OS=Bos taurus GN=MMP20 PE=1 SV=1
Length = 481
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 16/183 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFPG+P+W ++ TL+Y SK + ++ + A W+S +P++F+ +
Sbjct: 105 NYRLFPGEPKWKKN---TLTYRISK--YTPSMTPAEVDRAMEMALRAWSSAVPLNFVRIN 159
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDHGD PFDG G LAH+F+P G H D AE W +
Sbjct: 160 AGE-ADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTN---- 214
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQGVQALYGSNP 226
+L +VA HE GH LGL HS A+M+PT K ++ L DD++G+QALYG
Sbjct: 215 --GFNLFTVAAHEFGHALGLAHSTDPSALMFPTYKYQNPYGFRLPKDDVKGIQALYGPRR 272
Query: 227 NFT 229
F+
Sbjct: 273 AFS 275
>sp|P13943|MMP1_RABIT Interstitial collagenase OS=Oryctolagus cuniculus GN=MMP1 PE=2 SV=1
Length = 468
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PG PRW + L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 FVLTPGNPRWEQ---THLTYRI--ENYTPDLSRADVDNAIEKAFQLWSNVTPLTFTKVSK 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D + W DF +
Sbjct: 154 GQ-ADIMISFVRGDHRDNSPFDGPEGQLAHAFQPGLGIGGDVHFDEDDRWTKDFRN---- 208
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP V LA DDI G+QA+YG NP
Sbjct: 209 --YNLYRVAAHELGHSLGLSHSTDIGALMYPNYM-FSGDVQLAQDDIDGIQAIYGPSQNP 265
Query: 227 NFTIGSLVESDISTNLAVD 245
+ +G + L D
Sbjct: 266 SQPVGPQTPKVCDSKLTFD 284
>sp|P22894|MMP8_HUMAN Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1
Length = 467
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
++L PG P+W R L+Y N L +++ K AF W+ P+ F
Sbjct: 99 FMLTPGNPKWER---TNLTYRI--RNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQ 153
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
+ ADI I FY DHGD PFDG G+LAH+F P G H DA ETW +
Sbjct: 154 GE-ADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWT------NTS 206
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL HS A+MYP R+ L DDI G+QA+YG SN
Sbjct: 207 ANYNLFLVAAHEFGHSLGLAHSSDPGALMYPNYAFRETSNYSLPQDDIDGIQAIYGLSSN 266
Query: 226 P 226
P
Sbjct: 267 P 267
>sp|O70138|MMP8_MOUSE Neutrophil collagenase OS=Mus musculus GN=Mmp8 PE=2 SV=2
Length = 465
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N L ++K ++AF W+ P++F E
Sbjct: 98 DFLLTPGSPKWT-HTNLT----YRIINHTPQLSRAEVKTAIEKAFHVWSVASPLTFTEIL 152
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 153 QGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDSEETWTQDSKN--- 208
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 209 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 265
Query: 227 N 227
N
Sbjct: 266 N 266
>sp|P03956|MMP1_HUMAN Interstitial collagenase OS=Homo sapiens GN=MMP1 PE=1 SV=3
Length = 469
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL G PRW + L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTEGNPRWEQ---THLTYRI--ENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF------ 207
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE+GH LGL+HS A+MYP+ V LA DDI G+QA+YG NP
Sbjct: 208 REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYT-FSGDVQLAQDDIDGIQAIYGRSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
IG + L D
Sbjct: 267 VQPIGPQTPKACDSKLTFD 285
>sp|P21692|MMP1_PIG Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2
Length = 469
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++VL PG PRW L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 EFVLTPGNPRWEN---THLTYRI--ENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVS 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDH D PFDG G LAH+F P G H D E W +F
Sbjct: 154 EGQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRD--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYGSNPN 227
+L VA HE+GH LGL+HS A+MYP V L+ DDI G+QA+YG + N
Sbjct: 210 ---YNLYRVAAHELGHSLGLSHSTDIGALMYPNYI-YTGDVQLSQDDIDGIQAIYGPSEN 265
>sp|O88766|MMP8_RAT Neutrophil collagenase OS=Rattus norvegicus GN=Mmp8 PE=2 SV=1
Length = 466
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 16/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
D++L PG P+WT H +T + N + ++K ++AF W+ ++F ET
Sbjct: 99 DFLLTPGSPKWT-HTNLT----YRIINHTPQMSKAEVKTEIEKAFKIWSVPSTLTFTETL 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ + ADI I F + DHGD PFDG G+LAH+F P G H D+ ETW D +
Sbjct: 154 EGE-ADINIAFVSRDHGDNSPFDGPNGILAHAFQPGRGIGGDAHFDSEETWTQDSKN--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGSNP 226
+L VA HE GH LGL+HS A+MYP R+ L DDI G+Q +YG +
Sbjct: 210 ---YNLFLVAAHEFGHSLGLSHSTDPGALMYPNYAYREPSTYSLPQDDINGIQTIYGPSD 266
Query: 227 N 227
N
Sbjct: 267 N 267
>sp|Q9XSZ5|MMP1_HORSE Interstitial collagenase OS=Equus caballus GN=MMP1 PE=2 SV=1
Length = 469
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 98/200 (49%), Gaps = 18/200 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++VL G PRW L+Y EN L D+ ++AF W++V P++F +
Sbjct: 99 EFVLTEGNPRWEN---THLTYRI--ENYTPDLPRADVDQAIEKAFQLWSNVSPLTFTKVS 153
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI I F GDH D PFDG G LAH+F P G H D ETW +F +
Sbjct: 154 EGQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPRIGGDAHFDEDETWTSNFRN--- 209
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SN 225
+L VA HE GH LGL+HS A+MYP V L+ DDI G+QA+YG N
Sbjct: 210 ---YNLYRVAAHEFGHSLGLSHSTDIGALMYPNYF-FTGDVQLSQDDINGIQAIYGPSQN 265
Query: 226 PNFTIGSLVESDISTNLAVD 245
P IG + L D
Sbjct: 266 PIQPIGPQTPEVCDSKLTFD 285
>sp|P09237|MMP7_HUMAN Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1
Length = 267
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y LFP P+WT V +++++ HIT + + +A + W IP+ F +
Sbjct: 94 EYSLFPNSPKWTSKVVTYRIVSYTRD----LPHIT-VDRLVSKALNMWGKEIPLHFRKVV 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKS 167
+ ADI IGF G HGD PFDG LAH+F+P + G H D E W ++ S
Sbjct: 149 -WGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERW-----TDGS 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSNP 226
+ ++ A HE+GH LG+ HS AVMYPT D + L+ DDI+G+Q LYG
Sbjct: 203 SLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRS 262
Query: 227 N 227
N
Sbjct: 263 N 263
>sp|P07152|MMP10_RAT Stromelysin-2 OS=Rattus norvegicus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ +SY ++NY L + + +RA W V P++F
Sbjct: 100 FSTFPGSPKWRKN---HISY-----RIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDGV LAH++ P G + H D E W++
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFYPFDGVGQSLAHAYPPGPGFYGDAHFDDDEKWSL----- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK--PRDKKVDLALDDIQGVQALYG 223
P +L VA HE+GH LGL HS KE++MYP + + L+ DDI+G+Q+LYG
Sbjct: 206 -GPSGTNLFLVAAHELGHSLGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIEGIQSLYG 264
Query: 224 SNPN 227
+ P+
Sbjct: 265 ARPS 268
>sp|Q9NRE1|MMP26_HUMAN Matrix metalloproteinase-26 OS=Homo sapiens GN=MMP26 PE=2 SV=2
Length = 261
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 22/191 (11%)
Query: 40 YDPAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLH---ITDIKAVFKRAFS 96
+ P D + PG+ +W +H TL+Y +INY H + +K A S
Sbjct: 78 HQPHCGVPDGSDTSISPGRCKWNKH---TLTY-----RIINYPHDMKPSAVKDSIYNAVS 129
Query: 97 KWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGK---FHLD 153
W++V P+ F + + D ADI++ F+ H DG PFDG G+L H+F P SG H D
Sbjct: 130 IWSNVTPLIFQQVQNGD-ADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNSGNPGVVHFD 188
Query: 154 AAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLAL 212
E W+ S +L VA HEIGH LGL HS + ++MYPT D + L+
Sbjct: 189 KNEHWSA------SDTGYNLFLVATHEIGHSLGLQHSGNQSSIMYPTYWYHDPRTFQLSA 242
Query: 213 DDIQGVQALYG 223
DDIQ +Q LYG
Sbjct: 243 DDIQRIQHLYG 253
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
+VL PGK W L+Y EN L D+ ++AF W++V P++F + +
Sbjct: 100 FVLTPGKSCWEN---TNLTYRI--ENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSE 154
Query: 112 YDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSP 168
ADI I F GDH D PFDG G LAH+F P + G H D E W +F
Sbjct: 155 GQ-ADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQD---- 209
Query: 169 VAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALYG--SNP 226
+L VA HE GH LGL HS A+MYP+ V L+ DDI G+QA+YG NP
Sbjct: 210 --YNLYRVAAHEFGHSLGLAHSTDIGALMYPSYT-FSGDVQLSQDDIDGIQAIYGPSQNP 266
Query: 227 NFTIGSLVESDISTNLAVD 245
+G + L D
Sbjct: 267 TQPVGPQTPEVCDSKLTFD 285
>sp|O13065|MMP18_XENLA Matrix metalloproteinase-18 OS=Xenopus laevis GN=mmp18 PE=2 SV=1
Length = 467
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVL 136
N L D++ +RAF W+ V P++F + + +DI I F GDH D PFDG
Sbjct: 120 NFTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYN-EVSDIEISFTAGDHKDNSPFDGSG 178
Query: 137 GVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVK 193
G+LAH+F P + G H D ETW K+ +L VA HE GH LGL+HS +
Sbjct: 179 GILAHAFQPGNGIGGDAHFDEDETWT------KTSEIYNLFLVAAHEFGHSLGLSHSTDQ 232
Query: 194 EAVMYPTLKPRDKKV-DLALDDIQGVQALYG--SNPNFTIGSLVESDISTNLAVD 245
A+MYPT D K L DDI +Q LYG SNP G S N+ +
Sbjct: 233 GALMYPTYSNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSRCDPNVVFN 287
>sp|P39900|MMP12_HUMAN Macrophage metalloelastase OS=Homo sapiens GN=MMP12 PE=1 SV=1
Length = 470
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 24/196 (12%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG P W +H ++Y + N ++ D+ ++AF W++V P+ F + + A
Sbjct: 104 PGGPVWRKHY---ITYRIN--NYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINT-GMA 157
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPES---GKFHLDAAETWAVDFGSEKSPVAVD 172
DI + F G HGD FDG G+LAH+F P S G H D E W G +
Sbjct: 158 DILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDEDEFWTTHSG------GTN 211
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS------- 224
L AVHEIGH LGL HS +AVM+PT K D L+ DDI+G+Q+LYG
Sbjct: 212 LFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYGDPKENQRL 271
Query: 225 -NPNFTIGSLVESDIS 239
NP+ + +L + ++S
Sbjct: 272 PNPDNSEPALCDPNLS 287
>sp|Q63341|MMP12_RAT Macrophage metalloelastase OS=Rattus norvegicus GN=Mmp12 PE=2 SV=1
Length = 465
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 19/181 (10%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + + A
Sbjct: 100 PQRSRWMKRYLTYRIYNYTPD-----MKRADVDYIFQKAFQVWSDVTPLRFRKIHKGE-A 153
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F GDHGD FDG G LAH+F P G H D AETW KS +
Sbjct: 154 DITILFAFGDHGDFYDFDGKGGTLAHAFYPGPGIQGDAHFDEAETWT------KSFQGTN 207
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKP-RDKKVDLALDDIQGVQALYGS---NPNF 228
L VAVHE+GH LGL HS +++MYPT + L+ DDI +Q+LYG+ NP+
Sbjct: 208 LFLVAVHELGHSLGLRHSNNPKSIMYPTYRYLHPNTFRLSADDIHSIQSLYGAPVKNPSL 267
Query: 229 T 229
T
Sbjct: 268 T 268
>sp|Q9H239|MMP28_HUMAN Matrix metalloproteinase-28 OS=Homo sapiens GN=MMP28 PE=2 SV=2
Length = 520
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDG--EPFDG 134
N +L ++ + AF W++V + F E ADIR+ F+ GDH DG FDG
Sbjct: 141 NWPEHLPEPAVRGAVRAAFQLWSNVSALEFWEAPATGPADIRLTFFQGDHNDGLGNAFDG 200
Query: 135 VLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKE 194
G LAH+F P G+ H D E W++ + +L V HEIGH LGLTHSP
Sbjct: 201 PGGALAHAFLPRRGEAHFDQDERWSLSRRRGR-----NLFVVLAHEIGHTLGLTHSPAPR 255
Query: 195 AVMYPTLKPRDKKVDLALDDIQGVQALYGSNPNFTIGSLVESDISTNLAVDL 246
A+M P K + L+ DD+ VQ+LYG +G V + L D
Sbjct: 256 ALMAPYYKRLGRDALLSWDDVLAVQSLYGK----PLGGSVAVQLPGKLFTDF 303
>sp|O55123|MMP10_MOUSE Stromelysin-2 OS=Mus musculus GN=Mmp10 PE=2 SV=1
Length = 476
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + ++Y ++NY L + + ++A W V P++F
Sbjct: 100 FSTFPGSPKWRKS---HITY-----RIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG LAH++ P G + H D E W +
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFYPFDGPGQSLAHAYPPGPGFYGDVHFDDDEKWTL----- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVD--LALDDIQGVQALYG 223
+P +L VA HE+GH LGL HS KE++MYP + + L+ DDI+G+Q+LYG
Sbjct: 206 -APSGTNLFLVAAHELGHSLGLFHSDKKESLMYPVYRFSTSPANFHLSQDDIEGIQSLYG 264
Query: 224 SNPN 227
+ P+
Sbjct: 265 AGPS 268
>sp|P34960|MMP12_MOUSE Macrophage metalloelastase OS=Mus musculus GN=Mmp12 PE=1 SV=3
Length = 473
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
P + RW + Y ++ + + D+ +F++AF W+ V P+ F + D A
Sbjct: 108 PQRSRWMKRYLTYRIYNYTPD-----MKREDVDYIFQKAFQVWSDVTPLRFRKLHK-DEA 161
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F G HGD FDG G LAH+F P G H D AETW F +
Sbjct: 162 DIMILFAFGAHGDFNYFDGKGGTLAHAFYPGPGIQGDAHFDEAETWTKSFQ------GTN 215
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKV-DLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +++MYPT + + L+ DDI+ +Q+LYG+
Sbjct: 216 LFLVAVHELGHSLGLQHSNNPKSIMYPTYRYLNPSTFRLSADDIRNIQSLYGA 268
>sp|P50280|MMP7_RAT Matrilysin OS=Rattus norvegicus GN=Mmp7 PE=2 SV=1
Length = 267
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
++ L P P+W +T ++ +L + + KRA W+ IP++F
Sbjct: 97 EFSLMPNSPKWHSRT-VTYRIVSYTTDLPRFL----VDQIVKRALRMWSMQIPLNFKRVS 151
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF GDHGD PFDG L H+F+P G H D E W ++
Sbjct: 152 -WGTADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYW-----TDGE 205
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
V+ VA HE+GH LGL HS V +VMYPT + D D +L DDI G+Q LYG
Sbjct: 206 DSGVNFLFVATHELGHSLGLGHSSVPSSVMYPTYQ-GDHSEDFSLTKDDIAGIQKLYG 262
>sp|Q9EPL5|MMP1A_MOUSE Interstitial collagenase A OS=Mus musculus GN=Mmp1a PE=2 SV=1
Length = 464
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 32 FKLKQSDKYDPAEATRHKKD---------YVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
F LK + DP KK Y + PRWT+ +S N YL
Sbjct: 68 FGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTK-----THLTYSILNYTPYL 122
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
++ RAF W+ V P++F + + DI + F+ GDHGD PFDG LAH+
Sbjct: 123 PKAVVEDAIARAFRVWSDVTPLTFQRVFEEE-GDIVLSFHRGDHGDNNPFDGPNYKLAHT 181
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D ETW S +L V HE+GH LGLTHS A+M+P
Sbjct: 182 FQPGPGLGGDVHYDLDETWT------NSSENFNLFYVTAHELGHSLGLTHSSDIGALMFP 235
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ + L DDI +Q LYG +PN
Sbjct: 236 SYTWYTEDFVLNQDDINRIQDLYGPSPN 263
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 23/185 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
D+ FPG P+W + L+Y ++NY L + + ++A + W V P++F
Sbjct: 99 DFTTFPGMPKWRK---THLTY-----RIMNYTPDLPRDAVDSAIEKALNVWKEVTPLTFS 150
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPESGKF---HLDAAETWAVDFGS 164
TD+ + ADI+I F DHGD PFDG VL H++ P G + H D E W D
Sbjct: 151 RTDEGE-ADIKISFAVRDHGDFNPFDGPGNVLGHAYPPGPGIYGDAHFDDDEQWTSDTS- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLK--PRDKKVDLALDDIQGVQALY 222
+L VA HE+GH LGL HS A+MYP + L+ DD+ G+Q+LY
Sbjct: 209 -----GTNLFLVAAHELGHSLGLFHSADPSALMYPVYNVLADLARFHLSQDDVNGIQSLY 263
Query: 223 GSNPN 227
G P+
Sbjct: 264 GGPPS 268
>sp|P79227|MMP12_RABIT Macrophage metalloelastase OS=Oryctolagus cuniculus GN=MMP12 PE=2
SV=1
Length = 464
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 90/173 (52%), Gaps = 16/173 (9%)
Query: 56 PGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFA 115
PG+P W +H + +N + D++ ++AF W+ V P+ F + A
Sbjct: 99 PGRPVWRKHY-----ITYRIKNYTPDMKREDVEYAIQKAFQVWSDVTPLKFRKITTGK-A 152
Query: 116 DIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVD 172
DI I F +G HGD FDG GV+AH+F P G H D E W+ KS +
Sbjct: 153 DIMILFASGAHGDYGAFDGRGGVIAHAFGPGPGIGGDTHFDEDEIWS------KSYKGTN 206
Query: 173 LESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGS 224
L VAVHE+GH LGL HS +A+M+PT D L+ DDI+G+Q+LYG
Sbjct: 207 LFLVAVHELGHALGLDHSNDPKAIMFPTYGYIDLNTFHLSADDIRGIQSLYGG 259
>sp|P28862|MMP3_MOUSE Stromelysin-1 OS=Mus musculus GN=Mmp3 PE=2 SV=2
Length = 477
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 93/181 (51%), Gaps = 23/181 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + ++Y ++NY L + + ++A W V P++F
Sbjct: 100 FSTFPGSPKWRKS---HITY-----RIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F G+HGD PFDG VLAH+++P +G H D E W D
Sbjct: 152 ISEGE-ADIMISFAVGEHGDFVPFDGPGTVLAHAYAPGPGINGDAHFDDDERWTEDV--- 207
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 208 ---TGTNLFLVAAHELGHSLGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYG 264
Query: 224 S 224
+
Sbjct: 265 T 265
>sp|P45452|MMP13_HUMAN Collagenase 3 OS=Homo sapiens GN=MMP13 PE=1 SV=1
Length = 471
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY + ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RLHD-GIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
Query: 224 ---SNPN 227
+PN
Sbjct: 268 PGDEDPN 274
>sp|O77656|MMP13_BOVIN Collagenase 3 OS=Bos taurus GN=MMP13 PE=2 SV=1
Length = 471
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ M L+Y ++NY L ++++ F++AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSK---MNLTY-----RIVNYTPDLTHSEVEKAFRKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
>sp|Q10738|MMP7_MOUSE Matrilysin OS=Mus musculus GN=Mmp7 PE=2 SV=1
Length = 264
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETD 110
+Y L P P+W + +++ + L + + K+A W+ IP++F
Sbjct: 94 EYSLMPNSPKWHSRIVTYRIVSYTSD-----LPRIVVDQIVKKALRMWSMQIPLNFKRVS 148
Query: 111 DYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKS 167
+ ADI IGF DHGD PFDG L H+F+P G H D E W ++
Sbjct: 149 -WGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGGDAHFDKDEYW-----TDGE 202
Query: 168 PVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL--DDIQGVQALYG 223
V+ A HE GH LGL+HS V VMYPT + RD D +L DDI G+Q LYG
Sbjct: 203 DAGVNFLFAATHEFGHSLGLSHSSVPGTVMYPTYQ-RDYSEDFSLTKDDIAGIQKLYG 259
>sp|P03957|MMP3_RAT Stromelysin-1 OS=Rattus norvegicus GN=Mmp3 PE=1 SV=1
Length = 475
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 23/180 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W ++ +SY ++NY L + + +RA W V P++F
Sbjct: 98 FSTFPGSPKWRKN---HISY-----RIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSR 149
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSP---ESGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W D
Sbjct: 150 ISEGE-ADIMISFAVEEHGDFIPFDGPGMVLAHAYAPGPGTNGDAHFDDDERWTDDV--- 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
+L VA HE+GH LGL HS EA+MYP K + L+ DD+ G+Q+LYG
Sbjct: 206 ---TGTNLFLVAAHELGHSLGLFHSANAEALMYPVYKSSTDLARFHLSQDDVDGIQSLYG 262
>sp|P23097|MMP13_RAT Collagenase 3 (Fragment) OS=Rattus norvegicus GN=Mmp13 PE=1 SV=1
Length = 466
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 99 YNVFPRTLKWSQ---TNLTY-----RIVNYTPDISHSEVEKAFRKAFKVWSDVTPLNFTR 150
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 151 IHD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGGDAHFDDDETWT------ 203
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG- 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 204 SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGP 263
Query: 224 --SNPN 227
+PN
Sbjct: 264 GDEDPN 269
>sp|O62806|MMP13_RABIT Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1
Length = 471
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 22/180 (12%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 103 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 154
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 155 RIHN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 208
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q+LYG
Sbjct: 209 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYG 267
>sp|O18927|MMP13_HORSE Collagenase 3 OS=Equus caballus GN=MMP13 PE=2 SV=1
Length = 472
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W + M L+Y ++NY L ++++ FK+AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWPK---MNLTY-----RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
+ ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RLYN-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 210 -SSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFVLPDDDVQGIQYLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>sp|Q9EPL6|MMP1B_MOUSE Interstitial collagenase B OS=Mus musculus GN=Mmp1b PE=2 SV=1
Length = 463
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 32 FKLKQSDKYDPAEATRHKKD---------YVLFPGKPRWTRHVPMTLSYAFSKENMINYL 82
F LK + DP KK Y + PRWT+ +S N YL
Sbjct: 68 FGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTK-----THLTYSILNYTPYL 122
Query: 83 HITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHS 142
++ RAF W+ V P++F + + DI + F+ GDHGD FDG AH+
Sbjct: 123 SKAVVEDAIARAFRVWSDVTPLTFQRVFEEE-GDIVLSFHRGDHGDLYTFDGSKYHFAHA 181
Query: 143 FSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP 199
F P G H D + W + +L V HE+GH LGL+HS +EA+M+P
Sbjct: 182 FLPGLGLGGNVHYDLDQKWT------DNNEDFNLFYVTAHELGHSLGLSHSNDEEALMFP 235
Query: 200 TLKPRDKKVDLALDDIQGVQALYGSNPN 227
+ +K L DDI +QALYG +PN
Sbjct: 236 SYTWSNKDFVLNQDDINRIQALYGPSPN 263
>sp|P28863|MMP3_RABIT Stromelysin-1 OS=Oryctolagus cuniculus GN=MMP3 PE=2 SV=1
Length = 478
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 23/183 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+WT+ L+Y ++NY L + A ++A W V P++F
Sbjct: 101 FSTFPGTPKWTK---THLTY-----RIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSR 152
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 153 KYEGE-ADIMISFGVREHGDFIPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 205
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HE+GH LGL HS EA+MYP + L+ DD+ G+Q+LYG
Sbjct: 206 KDTTGTNLFLVAAHELGHSLGLFHSANPEALMYPVYNAFTDLARFRLSQDDVDGIQSLYG 265
Query: 224 SNP 226
P
Sbjct: 266 PAP 268
>sp|P33435|MMP13_MOUSE Collagenase 3 OS=Mus musculus GN=Mmp13 PE=1 SV=1
Length = 472
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 25/187 (13%)
Query: 51 DYVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFI 107
+Y +FP +W++ L+Y ++NY + ++++ F++AF W+ V P++F
Sbjct: 104 EYNVFPRTLKWSQ---TNLTY-----RIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFT 155
Query: 108 ETDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGS 164
D ADI I F +HGD PFDG G+LAH+F P G H D ETW
Sbjct: 156 RIYD-GTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWT----- 209
Query: 165 EKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKK-VDLALDDIQGVQALYG 223
S +L VA HE+GH LGL HS A+M+P K L DD+QG+Q LYG
Sbjct: 210 -SSSKGYNLFIVAAHELGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQFLYG 268
Query: 224 ---SNPN 227
+PN
Sbjct: 269 PGDEDPN 275
>sp|P08254|MMP3_HUMAN Stromelysin-1 OS=Homo sapiens GN=MMP3 PE=1 SV=2
Length = 477
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINY---LHITDIKAVFKRAFSKWASVIPVSFIE 108
+ FPG P+W + L+Y ++NY L + + ++A W V P++F
Sbjct: 100 FRTFPGIPKWRK---THLTY-----RIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH+++P +G H D E W
Sbjct: 152 LYEGE-ADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD--KKVDLALDDIQGVQALYG 223
K +L VA HEIGH LGL HS EA+MYP + L+ DDI G+Q+LYG
Sbjct: 205 KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG 264
Query: 224 SNPN 227
P+
Sbjct: 265 PPPD 268
>sp|Q28397|MMP3_HORSE Stromelysin-1 OS=Equus caballus GN=MMP3 PE=2 SV=1
Length = 477
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAV---FKRAFSKWASVIPVSFIE 108
+ FPG P+W++ L+Y ++NY AV ++A W V P++F
Sbjct: 100 FTTFPGMPKWSK---THLTY-----RIVNYTQDLPRDAVDSDVEKALKIWEEVTPLTFSR 151
Query: 109 TDDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSE 165
+ + ADI I F +HGD PFDG VLAH++ P +G H D E W
Sbjct: 152 IYEGE-ADIMITFAVREHGDFFPFDGPGKVLAHAYPPGPGMNGDAHFDDDEHWT------ 204
Query: 166 KSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYP---TLKPRDKKVDLALDDIQGVQALY 222
K ++ VA HE+GH LGL HS EA+MYP TLK +V L+ DD+ G+Q+LY
Sbjct: 205 KDASGINFLLVAAHELGHSLGLYHSTNTEALMYPLYNTLK-GPARVRLSQDDVTGIQSLY 263
Query: 223 GSNP 226
G P
Sbjct: 264 GPPP 267
>sp|O54732|MMP15_MOUSE Matrix metalloproteinase-15 OS=Mus musculus GN=Mmp15 PE=2 SV=1
Length = 657
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L GK H+ FS +N L + +RAF W V
Sbjct: 119 ANLRRRRKRYTLT-GKAWNNYHL------TFSIQNYTEKLGWYNSMEAVRRAFQVWEQVT 171
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDGV G LAH++ P G H
Sbjct: 172 PLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHF 231
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLA 211
DA E W S + L VAVHE+GH LGL HS A+M P + D L
Sbjct: 232 DADEPWTF---SSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDNFQLP 288
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYGS
Sbjct: 289 EDDLRGIQQLYGS 301
>sp|P55032|MMP7_FELCA Matrilysin (Fragment) OS=Felis catus GN=MMP7 PE=2 SV=1
Length = 262
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 58 KPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADI 117
+P+W V +++++ L + + +A + W+ IP+SF DI
Sbjct: 96 RPKWISKVVTYRIISYTRD-----LPRVTVDHLVAKALNMWSKEIPLSFRRVV-LGIPDI 149
Query: 118 RIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAETWAVDFGSEKSPVAVDLE 174
IGF G HGD PFDG G LAH++ P G H D E WA G + ++
Sbjct: 150 VIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDAHFDEDERWADGRG-----LGINFL 204
Query: 175 SVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLALDDIQGVQALYGSN 225
+VA HE+GH LGL HS ++VMYPT RD + L+ DI+ +Q LYG
Sbjct: 205 AVATHELGHSLGLRHSSDPDSVMYPTYGARDSENFKLSPGDIREIQELYGKR 256
>sp|O75900|MMP23_HUMAN Matrix metalloproteinase-23 OS=Homo sapiens GN=MMP23A PE=1 SV=2
Length = 390
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 42 PAEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASV 101
P ++ Y L P + RW H +T N+++ + + AF W+ V
Sbjct: 69 PGPLAPRRRRYTLTPARLRWD-HFNLTYRILSFPRNLLS---PRETRRALAAAFRMWSDV 124
Query: 102 IPVSFIETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAA 155
P SF E +D+RIGFY +H D FDG G LAH+F P G H D +
Sbjct: 125 SPFSFREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDS 184
Query: 156 ETWAVD---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLAL 212
E W + + +K DL VA HEIGH LGL HS A+M+ R K L+
Sbjct: 185 EYWVLGPTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQ 243
Query: 213 DDIQGVQALYGS 224
D++ G+ LYG
Sbjct: 244 DELWGLHRLYGC 255
>sp|O88272|MMP23_RAT Matrix metalloproteinase-23 OS=Rattus norvegicus GN=Mmp23 PE=1 SV=1
Length = 391
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLS-YAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFI 107
++ Y L P + RW H +T +F + N L + + AF W+ V P SF
Sbjct: 77 RRRYTLTPARLRWD-HFNLTYRILSFPR----NLLSPEETRRGLAAAFRMWSDVSPFSFR 131
Query: 108 ETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
E +D++IGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 132 EVAPERPSDLKIGFYPVNHTDCLVSALHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLG 191
Query: 162 ---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
+ +K DL VA HEIGH LGL HS +A+M+ R K L+ D++ G+
Sbjct: 192 PTRYSWKKGVWLTDLVHVAAHEIGHALGLMHSQQDQALMHLNATLRGWKA-LSQDELWGL 250
Query: 219 QALYGS 224
LYG
Sbjct: 251 HRLYGC 256
>sp|P51511|MMP15_HUMAN Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1
Length = 669
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 43 AEATRHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVI 102
A R +K Y L K W H FS +N L +RAF W
Sbjct: 123 ANLRRRRKRYALTGRK--WNNH-----HLTFSIQNYTEKLGWYHSMEAVRRAFRVWEQAT 175
Query: 103 PVSFIETDDYDF-------ADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHL 152
P+ F E D ADI + F +G HGD PFDG G LAH++ P G H
Sbjct: 176 PLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAHAYFPGPGLGGDTHF 235
Query: 153 DAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRD-KKVDLA 211
DA E W S +L VAVHE+GH LGL HS A+M P + +D L
Sbjct: 236 DADEPWTF---SSTDLHGNNLFLVAVHELGHALGLEHSSNPNAIMAPFYQWKDVDNFKLP 292
Query: 212 LDDIQGVQALYGS 224
DD++G+Q LYG+
Sbjct: 293 EDDLRGIQQLYGT 305
>sp|Q2TBM7|MMP23_BOVIN Matrix metalloproteinase-23 OS=Bos taurus GN=MMP23 PE=2 SV=1
Length = 393
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 52 YVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFIETDD 111
Y L P + RW H +T N+++ ++ + AF W+ V P SF E
Sbjct: 82 YTLTPARLRW-EHFNLTYKILSFPRNLLS---PSETRRGLAAAFRMWSDVSPFSFREVAP 137
Query: 112 YDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD---F 162
+D+RIGFY +H D FDG G LAH+F P G H D +E W + +
Sbjct: 138 EQPSDLRIGFYPVNHTDCLVSPLHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLGRTRY 197
Query: 163 GSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGVQALY 222
+K DL VA HEIGH LGL HS A+M+ R K L+ D++ G+ LY
Sbjct: 198 SWKKGVWLTDLVHVAAHEIGHALGLMHSQHGRALMHLNATLRGWKA-LSQDELWGLHRLY 256
Query: 223 GS 224
G
Sbjct: 257 GC 258
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 47 RHKKDYVLFPGKPRWTRHVPMTLSYAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSF 106
R K Y L K R +H+ +S N + D + ++AF W V P++F
Sbjct: 151 RRNKRYALTGQKWR-QKHI------TYSIHNYTPKVGELDTRKAIRQAFDVWQKVTPLTF 203
Query: 107 IET------DDYDFADIRIGFYNGDHGDGEPFDGVLGVLAHSFSPE---SGKFHLDAAET 157
E D ADI I F +G HGD PFDG G LAH++ P G H D+ E
Sbjct: 204 EEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEP 263
Query: 158 WAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDK-KVDLALDDIQ 216
W + + DL VAVHE+GH LGL HS A+M P + + L DD+Q
Sbjct: 264 WTLGNANHD---GNDLFLVAVHELGHALGLEHSSDPSAIMAPFYQYMETHNFKLPQDDLQ 320
Query: 217 GVQALYG 223
G+Q +YG
Sbjct: 321 GIQKIYG 327
>sp|Q9JHI0|MMP19_MOUSE Matrix metalloproteinase-19 OS=Mus musculus GN=Mmp19 PE=2 SV=1
Length = 527
Score = 90.9 bits (224), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 77 NMINYLHITDIKAVFKRAFSKWASVIPVSFIETDDYDFADIRIGFYNGDHGD-----GEP 131
N+ + L + ++A +AF W+SV P++F E +ADIR+ F HG
Sbjct: 116 NVPSTLSLPRVRAALHQAFKYWSSVAPLTFREVKA-GWADIRLSF----HGRQSLYCSNT 170
Query: 132 FDGVLGVLAHSFSPESGKFHLDAAETWAVDFGSEKSPVAVDLESVAVHEIGHLLGLTHSP 191
FDG VLAH+ PE G H D E W +E + V+L +A HE+GH LGL HS
Sbjct: 171 FDGPGKVLAHADIPELGSIHFDKDELW-----TEGTYQGVNLRIIAAHEVGHALGLGHSR 225
Query: 192 VKEAVMYPTLKPRDKKVDLALDDIQGVQALYG 223
+A+M P L DD+ G+QALYG
Sbjct: 226 YTQALMAPVYAGYQPFFKLHPDDVAGIQALYG 257
>sp|O88676|MMP23_MOUSE Matrix metalloproteinase-23 OS=Mus musculus GN=Mmp23 PE=2 SV=1
Length = 391
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 49 KKDYVLFPGKPRWTRHVPMTLS-YAFSKENMINYLHITDIKAVFKRAFSKWASVIPVSFI 107
++ Y L P + RW H +T +F + N L + + AF W+ V P SF
Sbjct: 77 RRRYTLTPARLRWD-HFNLTYRVLSFPR----NLLSPEETRRGLAAAFRMWSDVSPFSFR 131
Query: 108 ETDDYDFADIRIGFYNGDHGDG------EPFDGVLGVLAHSFSPESGKFHLDAAETWAVD 161
E +D++IGFY +H D FDG G LAH+F P G H D +E W +
Sbjct: 132 EVAPERPSDLKIGFYPVNHTDCLVSAVHHCFDGPTGELAHAFFPPHGGIHFDDSEYWVLG 191
Query: 162 ---FGSEKSPVAVDLESVAVHEIGHLLGLTHSPVKEAVMYPTLKPRDKKVDLALDDIQGV 218
+ +K +L VA HEIGH LGL HS +A+M+ R K L+ D++ G+
Sbjct: 192 PTRYSWKKGVWLTNLVHVAAHEIGHALGLMHSQQDQALMHLNATLRGWKA-LSQDELWGL 250
Query: 219 QALYGS 224
LYG
Sbjct: 251 HRLYGC 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,235,680
Number of Sequences: 539616
Number of extensions: 4583595
Number of successful extensions: 9863
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 9496
Number of HSP's gapped (non-prelim): 134
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)