BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043643
(634 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55874|Y103_SYNY3 Uncharacterized protein sll0103 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0103 PE=4 SV=1
Length = 420
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 44/281 (15%)
Query: 152 LRVCAPSLPNDADR-APIDLVTVLDVSGSMSSK-LPLLKRAVHFIIQNLGSADRLSIVIF 209
LR+ + +D DR P++L VLD SGSM + L +K A +I L DRLS++ F
Sbjct: 25 LRIAVAAKADDHDRRLPLNLCLVLDHSGSMDGQPLETVKSAALGLIDRLEEDDRLSVIAF 84
Query: 210 SSVARRIFPLQRMTDSGRENAI-RAINTLSSNGGTNIVEGLKKGARVLEERRERSPVASI 268
A+ + Q++ + AI +AI L + GGT I EGLK G + + +E V+ I
Sbjct: 85 DHRAKIVIENQQVRNGA---AIAKAIERLKAEGGTAIDEGLKLGIQEAAKGKE-DRVSHI 140
Query: 269 ILLSDGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFG 328
LL+DG++ H ++ L + S L+ VHT GFG
Sbjct: 141 FLLTDGENEHG--------------DNDRCLKLGTVASDYKLT----------VHTLGFG 176
Query: 329 LEHDSEAMHAIADASGGTFSFIET----LSILQDAFARCIGGLLSVVSQDVKLTIRSKSA 384
+ + + AIA ++ G+ S+IE L + F R L+ ++L ++ A
Sbjct: 177 DHWNQDVLEAIAASAQGSLSYIENPSEALHTFRQLFQRMSNVGLTNAHLLLELAPQAHLA 236
Query: 385 GVRIGSIPSGRYNSEVLD---EGQQAV--IDIGNLYADEEK 420
V+ P + + E +D + Q A+ + +G+L D+E+
Sbjct: 237 IVK----PVAQVSPETMDLTVQNQGAIEEVRLGDLMTDQER 273
>sp|P76481|YFBK_ECOLI Uncharacterized protein YfbK OS=Escherichia coli (strain K12)
GN=yfbK PE=4 SV=1
Length = 575
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 27/221 (12%)
Query: 169 DLVTVLDVSGSMSS--KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFPLQRMTDSG 226
+LV ++D SGSM S +LPL++ ++ +++ L D ++IV ++ +R P ++ S
Sbjct: 216 NLVFLIDTSGSMISDERLPLIQSSLKLLVKELREQDNIAIVTYAGDSRIALP--SISGSH 273
Query: 227 RENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVASIILLSDGQDTHNVLRNSYT 286
+ AI++L + G TN GL+ + + + + I+L +DG +
Sbjct: 274 KAEINAAIDSLDAEGSTNGGAGLELAYQQATKGFIKGGINRILLATDGDFNVGI------ 327
Query: 287 QDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA-IADASGG 345
D+ SI S+ +RE+G + TFG G + +EAM IAD G
Sbjct: 328 -DDPKSI------------ESMVKKQRESG---VTLSTFGVGNSNYNEAMMVRIADVGNG 371
Query: 346 TFSFIETLSILQDAFARCIGGLLSVVSQDVKLTIRSKSAGV 386
+S+I+TLS Q + +L V++DVK I A V
Sbjct: 372 NYSYIDTLSEAQKVLNSEMRQMLITVAKDVKAQIEFNPAWV 412
>sp|Q9GLY5|ITIH3_RABIT Inter-alpha-trypsin inhibitor heavy chain H3 OS=Oryctolagus
cuniculus GN=ITIH3 PE=2 SV=1
Length = 903
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSS-VARRIFPLQRMT 223
P ++V V+DVSGSM KL K A+ I++++ D L+ ++FSS V L + T
Sbjct: 281 VPKNVVFVIDVSGSMYGRKLEQTKDALLKILEDMREEDHLNFILFSSDVTTWKEHLVQAT 340
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRE--RSPVAS---IILLSDGQDTH 278
+ A + ++ G TN+ +GL +G +L RE R P S +I+L+DG
Sbjct: 341 PENLQEARAFVKSIQDQGSTNLNDGLLRGISMLNTAREEHRVPERSTSIVIMLTDG---- 396
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
+A+S S P I + R A FP++ GFG
Sbjct: 397 ----------DANSGESR--------PEKIQENVRNAIGGKFPLYNLGFG---------- 428
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+E+L++ D FAR I
Sbjct: 429 ----NNLNYNFLESLALENDGFARRI 450
>sp|P97280|ITIH3_MESAU Inter-alpha-trypsin inhibitor heavy chain H3 OS=Mesocricetus
auratus GN=ITIH3 PE=1 SV=1
Length = 886
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSS-VARRIFPLQRMT 223
P ++V V+D+SGSM+ K+ + A+ I+ ++ D L+ ++FS+ V L + T
Sbjct: 278 VPKNIVFVIDISGSMAGRKIQQTRVALLKILDDMKQDDYLNFILFSTGVTTWKDSLVQAT 337
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPV-----ASIILLSDGQDTH 278
+ E A + ++S G TNI +GL +G R+L + RE+ V + II+L+DG
Sbjct: 338 PANLEEARTFVRSISDQGMTNINDGLLRGIRMLTDAREQHTVPERSTSIIIMLTDG---- 393
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
+A++ S P I + R+A + FP++ GFG
Sbjct: 394 ----------DANTGESR--------PEKIQENVRKAIEGRFPLYNLGFG---------- 425
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+ET+++ AR I
Sbjct: 426 ----NNLNYNFLETMALENHGVARRI 447
>sp|P54281|ECLC_BOVIN Epithelial chloride channel protein OS=Bos taurus PE=2 SV=1
Length = 903
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 173 VLDVSGSMSSKLPLLKR---AVHFIIQNLGSADRLSIVIFSSVARRIFPLQRMTDSGREN 229
VLD SGSMSS+ L + A F+IQ + + +V F SVA L ++TD
Sbjct: 312 VLDKSGSMSSEDRLFRMNQAAELFLIQIIEKGSLVGMVTFDSVAEIRNNLTKITDDNVYE 371
Query: 230 AIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVASIILLSDGQD 276
I A +NGGT+I GLK G + + + ++ + + IILL+DG+D
Sbjct: 372 NITANLPQEANGGTSICRGLKAGFQAIIQSQQSTSGSEIILLTDGED 418
>sp|Q5RB37|ITIH3_PONAB Inter-alpha-trypsin inhibitor heavy chain H3 OS=Pongo abelii
GN=ITIH3 PE=2 SV=1
Length = 876
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFS-SVARRIFPLQRMT 223
P ++ V+D+SGSM+ KL K A+ I++++ D L+ ++FS V+ L + T
Sbjct: 278 VPKNVAFVIDISGSMAGRKLEQTKEALLRILEDMKKEDYLNFILFSGDVSTWKEHLVQAT 337
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRE--RSPVAS---IILLSDGQDTH 278
+ A + ++ G TNI +GL +G +L + RE R P S +I+L+DG
Sbjct: 338 PENLQEARTFVKSMEDKGMTNINDGLLRGISMLNKAREEHRVPERSTSIVIMLTDGDANV 397
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
R P I + R A FP++ GFG
Sbjct: 398 GESR----------------------PEKIQENVRNAIGGKFPLYNLGFG---------- 425
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+E +++ FAR I
Sbjct: 426 ----NNLNYNFLENMALENHGFARRI 447
>sp|Q61704|ITIH3_MOUSE Inter-alpha-trypsin inhibitor heavy chain H3 OS=Mus musculus
GN=Itih3 PE=1 SV=3
Length = 889
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSS-VARRIFPLQRMT 223
P ++V V+DVSGSMS K+ + A+ I+ ++ D L+ ++FS+ V L + T
Sbjct: 281 VPKNIVFVIDVSGSMSGRKIQQTREALLKILDDVKEDDYLNFILFSTDVTTWKDHLVQAT 340
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPV-----ASIILLSDGQDTH 278
+ + A + + TNI +GL KG +L + RE V + II+L+DG
Sbjct: 341 PANLKEAKTFVKNIHDQSMTNINDGLLKGIEMLNKAREDHTVPERSTSIIIMLTDG---- 396
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
+A++ S P I + R A FP++ GFG
Sbjct: 397 ----------DANTGESR--------PEKIQENVRNAIGGKFPLYNLGFG---------- 428
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+ETL++ AR I
Sbjct: 429 ----NNLNYNFLETLALENHGLARRI 450
>sp|Q06033|ITIH3_HUMAN Inter-alpha-trypsin inhibitor heavy chain H3 OS=Homo sapiens
GN=ITIH3 PE=1 SV=2
Length = 890
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFS-SVARRIFPLQRMT 223
P ++ V+D+SGSM+ KL K A+ I++++ D L+ ++FS V+ L + T
Sbjct: 281 VPKNVAFVIDISGSMAGRKLEQTKEALLRILEDMQEEDYLNFILFSGDVSTWKEHLVQAT 340
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRE--RSPVAS---IILLSDGQDTH 278
+ A + ++ G TNI +GL +G +L + RE R P S +I+L+DG
Sbjct: 341 PENLQEARTFVKSMEDKGMTNINDGLLRGISMLNKAREEHRIPERSTSIVIMLTDGDANV 400
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
R P I + R A FP++ GFG
Sbjct: 401 GESR----------------------PEKIQENVRNAIGGKFPLYNLGFG---------- 428
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+E +++ FAR I
Sbjct: 429 ----NNLNYNFLENMALENHGFARRI 450
>sp|Q6Q473|CLCA4_MOUSE Calcium-activated chloride channel regulator 4 OS=Mus musculus
GN=Clca4 PE=1 SV=2
Length = 924
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 146 PKFAVLLRVCAPSLPNDADRAPIDLVTVLDVSGSMSS--KLPLLKRAV-HFIIQNLGSAD 202
P F LLR+ ++R + VLDVSGSM+S +L + +A +F+ Q + +
Sbjct: 295 PPFFSLLRI--------SERI---MCLVLDVSGSMTSYDRLNRMNQAAKYFLSQIIENRS 343
Query: 203 RLSIVIFSSVARRIFPLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRER 262
+ +V FSS A + L ++ N + S+NGGT+I G+K +V + +
Sbjct: 344 WVGMVHFSSQATIVHELIQINSDIERNQLLQTLPTSANGGTSICSGIKAAFQVFKNGEYQ 403
Query: 263 SPVASIILLSDGQDT 277
+ I+LLSDG+D+
Sbjct: 404 TDGTEILLLSDGEDS 418
>sp|Q0VCM5|ITIH1_BOVIN Inter-alpha-trypsin inhibitor heavy chain H1 OS=Bos taurus GN=ITIH1
PE=2 SV=1
Length = 906
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 29/193 (15%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIF-SSVARRIF 217
P + + ++V V+D+S SM KL K A+H I+ ++ D +V+F S+V
Sbjct: 278 PQNLKKLNKNVVFVIDISSSMEGQKLKQTKEALHKILGDMRPGDYFDLVLFGSAVQSWKG 337
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVAS-----IILLS 272
L + + + E A + S G TN+ GL +G +L + ++ P S +I+L+
Sbjct: 338 SLVQASPANLEAARNFVQQFSLAGATNLNGGLLRGIEILNKAQQSLPELSNHASILIMLT 397
Query: 273 DGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHD 332
DG+ T V+ + I + R+ + FP++ GFG + D
Sbjct: 398 DGEPTEGVMDR----------------------TQILKNVRDGIKGRFPLYNLGFGHDVD 435
Query: 333 SEAMHAIADASGG 345
+ ++ + G
Sbjct: 436 LNFLEVMSLENNG 448
>sp|P19823|ITIH2_HUMAN Inter-alpha-trypsin inhibitor heavy chain H2 OS=Homo sapiens
GN=ITIH2 PE=1 SV=2
Length = 946
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRI-F 217
P++ D P +++ V+DVSGSM K+ A+ I+ +L + D S++ F+ R
Sbjct: 301 PDNLDPIPKNILFVIDVSGSMWGVKMKQTVEAMKTILDDLRAEDHFSVIDFNQNIRTWRN 360
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERR-----ERSPVASIILLS 272
L T + +A R I + +GGTNI E L + +L E + + V+ IIL+S
Sbjct: 361 DLISATKTQVADAKRYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPNSVSLIILVS 420
Query: 273 DGQDTHNVLRNSYTQ 287
DG T L+ S Q
Sbjct: 421 DGDPTVGELKLSKIQ 435
>sp|Q63416|ITIH3_RAT Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus
GN=Itih3 PE=2 SV=1
Length = 887
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSS-VARRIFPLQRMT 223
P ++ V+DVSGSMS K+ + A+ I+ ++ D L+ ++FS+ V L + T
Sbjct: 281 VPKNIAFVIDVSGSMSGRKIQQTREALLKILDDMKEEDYLNFILFSTGVTTWKDHLVKAT 340
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPV-----ASIILLSDGQDTH 278
+ E A + + TNI +GL +G +L + RE V + +++L+DG
Sbjct: 341 PANLEEARAFVKNIRDRSMTNINDGLLRGIEMLNKAREDHLVPERSTSILVMLTDG---- 396
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
+A++ S P I + R A + FP++ GFG
Sbjct: 397 ----------DANTGESR--------PEKIQENVRNAIRGKFPLYNLGFG---------- 428
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+E+L++ FAR I
Sbjct: 429 ----NNLNYNFLESLALENHGFARRI 450
>sp|Q61703|ITIH2_MOUSE Inter-alpha-trypsin inhibitor heavy chain H2 OS=Mus musculus
GN=Itih2 PE=1 SV=1
Length = 946
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 160 PNDADRAPIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRI-F 217
P + D P +++ V+DVSGSM K+ A+ I+ +L + D+ S+V F+ R
Sbjct: 301 PENLDPIPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRTDDQFSVVDFNHNVRTWRN 360
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRER-----SPVASIILLS 272
L T + +A R I + +GGTNI E L + +L E V+ IIL+S
Sbjct: 361 DLVSATKTQIADAKRYIEKIQPSGGTNINEALLRAIFILNEASNMGLLNPDSVSLIILVS 420
Query: 273 DGQDTHNVLRNSYTQ 287
DG T L+ S Q
Sbjct: 421 DGDPTVGELKLSKIQ 435
>sp|Q14624|ITIH4_HUMAN Inter-alpha-trypsin inhibitor heavy chain H4 OS=Homo sapiens
GN=ITIH4 PE=1 SV=4
Length = 930
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 37/226 (16%)
Query: 160 PNDADRAPIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFP 218
P P ++V V+D SGSMS K+ + A+ I+ +L D+ ++++FS+ A + P
Sbjct: 265 PEGLTTMPKNVVFVIDKSGSMSGRKIQQTREALIKILDDLSPRDQFNLIVFSTEATQWRP 324
Query: 219 LQRMTDSGRENAIRAIN---TLSSNGGTNIVEGLKKGARVL-----EERRERSPVASIIL 270
+ + EN +A + + + GGTNI + + ++L EER V+ IIL
Sbjct: 325 --SLVPASAENVNKARSFAAGIQALGGTNINDAMLMAVQLLDSSNQEERLPEGSVSLIIL 382
Query: 271 LSDGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLE 330
L+DG T + N P SI + REA + + GFG +
Sbjct: 383 LTDGDPT--------------------VGETN--PRSIQNNVREAVSGRYSLFCLGFGFD 420
Query: 331 HDSEAMHAIADASGGTFSFIETLS----ILQDAFARCIGGLLSVVS 372
+ +A +GG I S LQD + LL+ V+
Sbjct: 421 VSYAFLEKLALDNGGLARRIHEDSDSALQLQDFYQEVANPLLTAVT 466
>sp|P97279|ITIH2_MESAU Inter-alpha-trypsin inhibitor heavy chain H2 OS=Mesocricetus
auratus GN=ITIH2 PE=1 SV=1
Length = 946
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 160 PNDADRAPIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRI-F 217
P + D P +++ V+DVSGSM K+ A+ I+ +L + D+ S+V F+ R
Sbjct: 301 PENLDPIPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRTEDQFSVVDFNHNVRTWRN 360
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRER-----SPVASIILLS 272
L T + +A R I + +GGTNI E L + +L E V+ I+L+S
Sbjct: 361 DLVSATKTQITDAKRYIEKIQPSGGTNINEALLRAIFILNEASNLGMLNPDSVSLIVLVS 420
Query: 273 DGQDTHNVLRNSYTQ 287
DG T L+ S Q
Sbjct: 421 DGDPTVGELKLSKIQ 435
>sp|Q14CN2|CLCA4_HUMAN Calcium-activated chloride channel regulator 4 OS=Homo sapiens
GN=CLCA4 PE=1 SV=2
Length = 919
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 173 VLDVSGSMSSKLPLLKR---AVHFIIQNLGSADRLSIVIFSSVARRIFPLQRMTDSGREN 229
VLD SGSM K L + A HF++Q + + + +V F S A + L ++ S N
Sbjct: 310 VLDKSGSMGGKDRLNRMNQAAKHFLLQTVENGSWVGMVHFDSTATIVNKLIQIKSSDERN 369
Query: 230 AIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVASIILLSDGQD 276
+ A GGT+I G+K +V+ E + + ++LL+DG+D
Sbjct: 370 TLMAGLPTYPLGGTSICSGIKYAFQVIGELHSQLDGSEVLLLTDGED 416
>sp|Q61702|ITIH1_MOUSE Inter-alpha-trypsin inhibitor heavy chain H1 OS=Mus musculus
GN=Itih1 PE=1 SV=2
Length = 907
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 43/212 (20%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIF-SSVARRIF 217
P + +LV V+D+SGSM K+ K A+ I++++ D +V+F S V
Sbjct: 280 PKNLTNMSKNLVFVIDISGSMEGQKVRQTKEALLKILEDMRPVDNFDLVLFGSKVQSWKG 339
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRER-----SPVASIILLS 272
L +++ + A + S G TN+ GL +G +L + + SP + +I+L+
Sbjct: 340 SLVPASNANLQAAQDFVRRFSLAGATNLNGGLLRGIEILNKAQGSHPELSSPASILIMLT 399
Query: 273 DGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHD 332
DG+ T + + S I N R A + FP++ GFG HD
Sbjct: 400 DGEPTEG-------ETDRSQILKN---------------VRNAIRGRFPLYNLGFG--HD 435
Query: 333 SEAMHAIADASGGTFSFIETLSILQDAFARCI 364
+ FSF+E +S + +A+ I
Sbjct: 436 LD------------FSFLEVMSTENNGWAQRI 455
>sp|Q86UX2|ITIH5_HUMAN Inter-alpha-trypsin inhibitor heavy chain H5 OS=Homo sapiens
GN=ITIH5 PE=2 SV=2
Length = 942
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIFSSVAR--RI 216
P D P ++V VLD S SM +KL K A+ I+ +L DR SI+ FS+ + +
Sbjct: 286 PKDLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDRFSIIGFSNRIKVWKD 345
Query: 217 FPLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERS-----PVASIILL 271
+ DS R+ + I+ +S GGT+I L++ R+L + S V+ I+ L
Sbjct: 346 HLISVTPDSIRDGKV-YIHHMSPTGGTDINGALQRAIRLLNKYVAHSGIGDRSVSLIVFL 404
Query: 272 SDGQDT 277
+DG+ T
Sbjct: 405 TDGKPT 410
>sp|P97278|ITIH1_MESAU Inter-alpha-trypsin inhibitor heavy chain H1 OS=Mesocricetus
auratus GN=ITIH1 PE=1 SV=1
Length = 914
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 43/212 (20%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIFSS-VARRIF 217
P + +LV V+D+SGSM K+ K A+ I+ ++ D +V+F S V
Sbjct: 286 PKNLTNMSKNLVFVIDISGSMEGQKVKQTKEALLKILGDVKPGDSFDLVLFGSRVQSWKG 345
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRER-----SPVASIILLS 272
L T + + A + S G TN+ GL +G +L + + SP + +I+L+
Sbjct: 346 SLVPATQANLQAAQDFVRRFSLAGATNLNGGLLRGIEILNKAQGSHPELSSPASILIMLT 405
Query: 273 DGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHD 332
DG+ T + + S I N R A + FP++ GFG HD
Sbjct: 406 DGEPTEG-------ETDRSQILKN---------------VRNAIRGRFPLYNLGFG--HD 441
Query: 333 SEAMHAIADASGGTFSFIETLSILQDAFARCI 364
+ F+F+E +S+ +A+ I
Sbjct: 442 LD------------FNFLEVMSMENSGWAQRI 461
>sp|A2VE29|ITIH5_BOVIN Inter-alpha-trypsin inhibitor heavy chain H5 OS=Bos taurus GN=ITIH5
PE=2 SV=1
Length = 940
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFP 218
P D P ++V VLD S SM +KL K A+ I+ +L D +IV FS+ RI
Sbjct: 286 PKDLPPLPKNVVFVLDSSASMVGTKLRQTKDALFTILHDLRPQDHFNIVGFSN---RIKV 342
Query: 219 LQRMTDSGRENAIR----AINTLSSNGGTNIVEGLKKGARVLEERR-----ERSPVASII 269
+ S N+IR I+ +S +GGT+I L++G ++L + E V+ ++
Sbjct: 343 WKDHLVSVTPNSIRDGKVYIHHMSPSGGTDINGALQRGIQLLNDYVAHNDIEDRSVSLVV 402
Query: 270 LLSDGQDT 277
L+DG+ T
Sbjct: 403 FLTDGKPT 410
>sp|O02668|ITIH2_PIG Inter-alpha-trypsin inhibitor heavy chain H2 OS=Sus scrofa GN=ITIH2
PE=2 SV=1
Length = 935
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 160 PNDADRAPIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRI-F 217
P D P +++ V+DVSGSM K+ A+ I+ +L + D+ S+V F+ R
Sbjct: 290 PESMDPIPKNILFVIDVSGSMWGIKMKQTVEAMKTILDDLRAEDQFSLVDFNHNIRTWRN 349
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERR-----ERSPVASIILLS 272
L T + +A I + +GGTNI E L + +L E + + V+ IIL+S
Sbjct: 350 DLVSATKTQVADAKTYIEKIQPSGGTNINEALLRAIFILNEANNLGLLDPNSVSLIILVS 409
Query: 273 DGQDTHNVLRNSYTQ 287
DG T L+ S Q
Sbjct: 410 DGDPTVGELQLSKIQ 424
>sp|Q8BG22|CLCA2_MOUSE Calcium-activated chloride channel regulator 2 OS=Mus musculus
GN=Clca2 PE=2 SV=1
Length = 942
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 145 PPKFAVLLRVCAPSLPNDADRAPIDLVTVLDVSGSMSSK---LPLLKRAVHFIIQNLGSA 201
PP F++L DR + V+DVS M+ L L + A +++Q + +
Sbjct: 299 PPTFSLL---------QAGDRV---VCLVIDVSRKMAEGDRLLRLQQAAELYLMQVVEAH 346
Query: 202 DRLSIVIFSSVARRIFPLQRM-TDSGRENAIRAINT-LSSNGGTNIVEGLKKGARVLEER 259
+ IV F S LQ++ +D R+ + + T +S++ TNI G+KKG V+EER
Sbjct: 347 TFVGIVTFDSKGEIRASLQQIYSDDDRKLLVSYLPTAVSTDAETNICAGVKKGFEVVEER 406
Query: 260 RERSPVASIILLSDGQDTH 278
R+ + +IL++ G D H
Sbjct: 407 NGRADGSVLILVTSGADEH 425
>sp|Q3T052|ITIH4_BOVIN Inter-alpha-trypsin inhibitor heavy chain H4 OS=Bos taurus GN=ITIH4
PE=1 SV=1
Length = 916
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 160 PNDADRAPIDLVTVLDVSGS-MSSKLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFP 218
P+ P +++ V+D SGS M K+ + A+ I+ +L D+ ++ FSS A P
Sbjct: 266 PDSLSTIPKNVIFVIDKSGSMMGRKIKQTREALIKILDDLSPHDQFDLISFSSEATTWKP 325
Query: 219 LQRMTDSGRENAIRAINT-LSSNGGTNIVEGLKKGARVLEE--RRERSPVAS---IILLS 272
L + N ++ T + + GGTNI + + ++LE+ + E P S IILL+
Sbjct: 326 LLVPASTENVNEAKSYATGIQAQGGTNINDAMLMAVQLLEKANQEELLPEGSITLIILLT 385
Query: 273 DGQDT 277
DG T
Sbjct: 386 DGDPT 390
>sp|P56652|ITIH3_BOVIN Inter-alpha-trypsin inhibitor heavy chain H3 OS=Bos taurus GN=ITIH3
PE=1 SV=2
Length = 891
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 43/206 (20%)
Query: 166 APIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFS-SVARRIFPLQRMT 223
P +V V+DVSGSM K+ K A+ I++++ D L+ ++FS V L T
Sbjct: 281 VPKSVVFVIDVSGSMHGRKMEQTKDALLKILEDVKQDDYLNFILFSGDVTTWKDSLVPAT 340
Query: 224 DSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPV-----ASIILLSDGQDTH 278
+ A + + + G TNI + L +G +L + RE V + II+L+DG
Sbjct: 341 PENIQEASKFVMDIQDRGMTNINDALLRGISMLNKAREEHTVPERSTSIIIMLTDGDANV 400
Query: 279 NVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHA 338
R P I + R A FP++ GFG
Sbjct: 401 GESR----------------------PEKIQENVRNAIGGKFPLYNLGFG---------- 428
Query: 339 IADASGGTFSFIETLSILQDAFARCI 364
+ ++F+E +++ AR I
Sbjct: 429 ----NNLNYNFLENMALENHGLARRI 450
>sp|Q5RJF7|CA2D4_MOUSE Voltage-dependent calcium channel subunit alpha-2/delta-4 OS=Mus
musculus GN=Cacna2d4 PE=2 SV=1
Length = 1116
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 100 PAEPEQFTDDEQLSVNSIGPASPSRAQALAVKAFPEFGAVAAAECPPKFAVLLRVCAPSL 159
P E F D L+ G ++ +K P+ V A +C + +
Sbjct: 211 PVFVENFQRDPTLTWQYFGSSTGFFRIYPGIKWMPDENGVIAFDCRNRGWYI-------- 262
Query: 160 PNDADRAPIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFP 218
A +P D+V ++D+SGSM ++ + K + I+ LG D ++I+ ++ I P
Sbjct: 263 --QAATSPKDIVILVDISGSMKGLRMAIAKHTITTILDTLGENDFVNIIAYNDYVHYIEP 320
Query: 219 -----LQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVA----SII 269
L + RE+ + ++ L G + + L + +L++ +E + +I+
Sbjct: 321 CFKGILVQADRDNREHFKQLVDELMVKGVGVVSQALIEAFEILKQFQESKQGSLCNQAIM 380
Query: 270 LLSDG 274
L++DG
Sbjct: 381 LITDG 385
>sp|Q29052|ITIH1_PIG Inter-alpha-trypsin inhibitor heavy chain H1 OS=Sus scrofa GN=ITIH1
PE=2 SV=1
Length = 902
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 31/182 (17%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIF-SSVARRIF 217
P + + ++V V+D+S SM K+ K A+ I+ +L D +V+F S+V
Sbjct: 275 PQNLTKLNKNVVFVIDISSSMEGQKVKQTKEALLKILSDLKPGDYFDLVLFGSAVQSWRG 334
Query: 218 PLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVAS-----IILLS 272
L + + + + A + S G TN+ GL +G +L + + P S +I+L+
Sbjct: 335 SLVQASTANLDAARSYVRQFSLAGSTNLNGGLLRGIEILNKAQGSLPEFSNRASILIMLT 394
Query: 273 DGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHD 332
DG+ T V S I + R+A + FP++ GFG HD
Sbjct: 395 DGEPTEGVTDRS----------------------QILKNVRDAIRGRFPLYNLGFG--HD 430
Query: 333 SE 334
E
Sbjct: 431 VE 432
>sp|A6X935|ITIH4_MOUSE Inter alpha-trypsin inhibitor, heavy chain 4 OS=Mus musculus
GN=Itih4 PE=1 SV=2
Length = 942
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 169 DLVTVLDVSGSMS-SKLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFPLQRMTDSGR 227
+++ V+D SGSMS K+ + A+ I+++L D+ +++ FS A + Q + +
Sbjct: 274 NVIFVIDKSGSMSGKKIQQTREALVKILKDLSPQDQFNLIEFSGEANQW--KQSLVQATE 331
Query: 228 ENAIRAINTLS---SNGGTNIVEGLKKGARVLE-----ERRERSPVASIILLSDGQDTHN 279
EN +A+N S ++GGTNI + +L+ E V+ IILL+DG T
Sbjct: 332 ENLNKAVNYASRIRAHGGTNINNAVLLAVELLDRSNQAELLPSKSVSLIILLTDGDPT-- 389
Query: 280 VLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHAI 339
+ N P+ I + REA + + GFG + + + +
Sbjct: 390 ------------------VGETN--PTIIQNNVREAINGQYSLFCLGFGFDVNYPFLEKM 429
Query: 340 ADASGG----TFSFIETLSILQDAFARCIGGLLSVVS 372
A +GG + ++ LQD + LLS V+
Sbjct: 430 ALDNGGLARRIYEDSDSALQLQDFYHEVANPLLSSVA 466
>sp|P19827|ITIH1_HUMAN Inter-alpha-trypsin inhibitor heavy chain H1 OS=Homo sapiens
GN=ITIH1 PE=1 SV=3
Length = 911
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 169 DLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIFSS-VARRIFPLQRMTDSG 226
++V V+D+SGSM K+ K A+ I+ ++ D +V+F + V L + +++
Sbjct: 292 NVVFVIDISGSMRGQKVKQTKEALLKILGDMQPGDYFDLVLFGTRVQSWKGSLVQASEAN 351
Query: 227 RENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVAS-----IILLSDGQDTHNVL 281
+ A + S + TN+ GL +G +L + +E P S +I+L+DG T V
Sbjct: 352 LQAAQDFVRGFSLDEATNLNGGLLRGIEILNQVQESLPELSNHASILIMLTDGDPTEGVT 411
Query: 282 RNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPVHTFGFGLEHDSEAMHAIAD 341
S I + R A + FP++ GFG D
Sbjct: 412 DRS----------------------QILKNVRNAIRGRFPLYNLGFGHNVD--------- 440
Query: 342 ASGGTFSFIETLSILQDAFARCI 364
F+F+E +S+ + A+ I
Sbjct: 441 -----FNFLEVMSMENNGRAQRI 458
>sp|Q9VB08|RING1_DROME E3 ubiquitin-protein ligase RING1 OS=Drosophila melanogaster
GN=Sce PE=1 SV=1
Length = 435
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L++ + T EC H F CI ++ GN+ CP CR
Sbjct: 46 CPICLDMLKK----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 86
>sp|Q9WTZ1|RBX2_MOUSE RING-box protein 2 OS=Mus musculus GN=Rnf7 PE=2 SV=1
Length = 113
Score = 43.9 bits (102), Expect = 0.004, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 11/59 (18%)
Query: 2 TCPICL-----GSLR-----RGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICRCEW 50
TC IC LR + + + EC+HSFH CC++ V+ NR CP+C+ +W
Sbjct: 49 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNR-CPLCQQDW 106
>sp|Q9UBF6|RBX2_HUMAN RING-box protein 2 OS=Homo sapiens GN=RNF7 PE=1 SV=1
Length = 113
Score = 43.9 bits (102), Expect = 0.004, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 11/59 (18%)
Query: 2 TCPICL-----GSLR-----RGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICRCEW 50
TC IC LR + + + EC+HSFH CC++ V+ NR CP+C+ +W
Sbjct: 49 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNR-CPLCQQDW 106
>sp|Q7Z3S7|CA2D4_HUMAN Voltage-dependent calcium channel subunit alpha-2/delta-4 OS=Homo
sapiens GN=CACNA2D4 PE=1 SV=2
Length = 1137
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 104 EQFTDDEQLSVNSIGPASPSRAQALAVKAFPEFGAVAAAECPPKFAVLLRVCAPSLPNDA 163
E F D L+ G A+ +K P+ V +C + + A
Sbjct: 236 ENFQRDPTLTWQYFGSATGFFRIYPGIKWTPDENGVITFDCRNRGWYI----------QA 285
Query: 164 DRAPIDLVTVLDVSGSMSS-KLPLLKRAVHFIIQNLGSADRLSIVIFSSVARRIFP---- 218
+P D+V ++DVSGSM ++ + K + I+ LG D ++I+ ++ I P
Sbjct: 286 ATSPKDIVILVDVSGSMKGLRMTIAKHTITTILDTLGENDFINIIAYNDYVHYIEPCFKG 345
Query: 219 -LQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVA----SIILLSD 273
L + RE+ + L G + + L++ ++L++ +E + +I+L+SD
Sbjct: 346 ILVQADRDNREHFKLLVEELMVKGVGVVDQALREAFQILKQFQEAKQGSLCNQAIMLISD 405
Query: 274 G 274
G
Sbjct: 406 G 406
>sp|Q6DFX2|ANTR2_MOUSE Anthrax toxin receptor 2 OS=Mus musculus GN=Antxr2 PE=2 SV=1
Length = 487
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 151 LLRVCAPSLPNDADRAP-----IDLVTVLDVSGSMSSKLPLLKRAVHFIIQNLGSAD-RL 204
LL V P A P DL VLD SGS+++ + VH + + S + RL
Sbjct: 21 LLAVGGPGSLLQAQEQPSCKKAFDLYFVLDKSGSVANNWIEIYNFVHQLTERFVSPEMRL 80
Query: 205 SIVIFSSVARRIFPL---QRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVLEERRE 261
S ++FSS A I PL + G E+ ++A+ + G T I EGLK ++
Sbjct: 81 SFIVFSSQATIILPLTGDRYKIGKGLED-LKAVKPV---GETYIHEGLKLANEQIQNAGG 136
Query: 262 RSPVASIILLSDGQDTHNVLRNSYTQDEA 290
+ II L+DG+ + L SY ++EA
Sbjct: 137 LKASSIIIALTDGK--LDGLVPSYAENEA 163
>sp|P58335|ANTR2_HUMAN Anthrax toxin receptor 2 OS=Homo sapiens GN=ANTXR2 PE=1 SV=5
Length = 489
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 165 RAPIDLVTVLDVSGSMSSKLPLLKRAVHFIIQNLGSAD-RLSIVIFSSVARRIFPLQRMT 223
R DL VLD SGS+++ + V + + S + RLS ++FSS A I PL
Sbjct: 40 RRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPL--TG 97
Query: 224 DSGR-ENAIRAINTLSSNGGTNIVEGLKKGARVLEERRERSPVASIILLSDGQDTHNVLR 282
D G+ + + +S G T I EGLK +++ + II L+DG+ + L
Sbjct: 98 DRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGK--LDGLV 155
Query: 283 NSYTQDEA 290
SY + EA
Sbjct: 156 PSYAEKEA 163
>sp|Q54DU5|Y2028_DICDI von Willebrand factor A domain-containing protein DDB_G0292028
OS=Dictyostelium discoideum GN=DDB_G0292028 PE=4 SV=1
Length = 932
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 42/235 (17%)
Query: 146 PKFAVLLRVCAPSLPNDADRAPIDLVTVLDVSGSMSSK-LPLLKRAVHFIIQNLGSADRL 204
PKF+V L ++ D+ + + VLD SGSMS K + K A+ +++L +
Sbjct: 328 PKFSVGL--------DEVDQKS-EFIFVLDCSGSMSGKPIEKSKMALEICMRSLNENSKF 378
Query: 205 SIVIFSSVARRIFPLQR-MTDSGRENAIRAINTLSSN-GGTNIVEGLKKGARVLEERRER 262
+IV F S ++F + D + A IN + +N GGT ++E + +L + +
Sbjct: 379 NIVCFGSNFNKLFETSKHYNDETLQKASEYINRIDANLGGTELLEPI---VDILSKESDP 435
Query: 263 SPVASIILLSDGQDTHNVLRNSYTQDEASSIPSNELAYLNLLPSSICLSKREAGQPTFPV 322
+ +L+DG+ ++ Y EA+ T +
Sbjct: 436 EFPRQVFILTDGEISNRDKLIDYVGKEAN---------------------------TTRI 468
Query: 323 HTFGFGLEHDSEAMHAIADASGGTFSFIETLSILQDAFARCIGGLLSVVSQDVKL 377
T+G G D E + ++ A G + I S +++ + I + ++K+
Sbjct: 469 FTYGIGSYVDKELIVGVSKACKGYYEMIVDNSDMEEKVMKLISIAMQPTLSNIKV 523
>sp|Q5UQ40|UBC4_MIMIV Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R795 PE=3 SV=1
Length = 1297
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 20 TAECSHSFHFCCIAANVQHGNRICPICRCEWK 51
+ CSHSFH CCI+ + H + CP+C EW+
Sbjct: 102 SVSCSHSFHACCISRWL-HTKKTCPLCNIEWQ 132
>sp|Q5R9J5|RING2_PONAB E3 ubiquitin-protein ligase RING2 OS=Pongo abelii GN=RNF2 PE=2
SV=1
Length = 336
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 51 CPICLDMLKN----TMTTKECLHRFCADCIITALRSGNKECPTCR 91
>sp|Q9CQJ4|RING2_MOUSE E3 ubiquitin-protein ligase RING2 OS=Mus musculus GN=Rnf2 PE=1
SV=1
Length = 336
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 51 CPICLDMLKN----TMTTKECLHRFCADCIITALRSGNKECPTCR 91
>sp|Q99496|RING2_HUMAN E3 ubiquitin-protein ligase RING2 OS=Homo sapiens GN=RNF2 PE=1
SV=1
Length = 336
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 51 CPICLDMLKN----TMTTKECLHRFCADCIITALRSGNKECPTCR 91
>sp|Q803I4|RING2_DANRE E3 ubiquitin-protein ligase RING2 OS=Danio rerio GN=rnf2 PE=2
SV=1
Length = 336
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 51 CPICLDMLKN----TMTTKECLHRFCADCIITALRSGNKECPTCR 91
>sp|Q6MGB6|RING1_RAT E3 ubiquitin-protein ligase RING1 OS=Rattus norvegicus GN=Ring1
PE=2 SV=2
Length = 406
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 48 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 88
>sp|O35730|RING1_MOUSE E3 ubiquitin-protein ligase RING1 OS=Mus musculus GN=Ring1 PE=1
SV=2
Length = 406
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 48 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 88
>sp|Q5TJF3|RING1_CANFA E3 ubiquitin-protein ligase RING1 OS=Canis familiaris GN=RING1
PE=3 SV=2
Length = 406
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 48 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 88
>sp|Q4KLY4|RING2_RAT E3 ubiquitin-protein ligase RING2 OS=Rattus norvegicus GN=Rnf2
PE=2 SV=1
Length = 308
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 51 CPICLDMLKN----TMTTKECLHRFCADCIITALRSGNKECPTCR 91
>sp|Q06587|RING1_HUMAN E3 ubiquitin-protein ligase RING1 OS=Homo sapiens GN=RING1 PE=1
SV=2
Length = 406
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 48 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 88
>sp|Q66J69|RNG2A_XENLA E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis GN=rnf2-a
PE=2 SV=1
Length = 344
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 48 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 88
>sp|Q8BJD1|ITIH5_MOUSE Inter-alpha-trypsin inhibitor heavy chain H5 OS=Mus musculus
GN=Itih5 PE=2 SV=1
Length = 952
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 160 PNDADRAPIDLVTVLDVSGSM-SSKLPLLKRAVHFIIQNLGSADRLSIVIFSSVAR---- 214
P + P ++V VLD+S SM +KL + A+ I+ +L DR +I+ FS+ +
Sbjct: 286 PKNLPPLPKNVVFVLDISASMVGAKLQQTREALVTILNDLRPQDRFNIIGFSNRIKMWKD 345
Query: 215 RIFPLQRMTDSGRENAIRAINTLSSNGGTNIVEGLKKGARVL-----EERRERSPVASII 269
+ P+ D+ R I + LS GGT+I L+ ++L + E V+ II
Sbjct: 346 HLLPV--TPDNIRNGKIYMYH-LSPTGGTDINGALQAAIKLLNNYVAQNDIEDRSVSLII 402
Query: 270 LLSDGQDT 277
L+DG+ T
Sbjct: 403 FLTDGKPT 410
>sp|Q9FKW0|RNG1A_ARATH Putative E3 ubiquitin-protein ligase RING1a OS=Arabidopsis thaliana
GN=RING1A PE=1 SV=2
Length = 522
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICLG +++ + V EC H F CI +++ GN CP CR
Sbjct: 136 CPICLGIIKKTRTVM----ECLHRFCRECIDKSMRLGNNECPACR 176
>sp|Q7ZWM8|RNG2B_XENLA E3 ubiquitin-protein ligase RING2-B OS=Xenopus laevis GN=rnf2-b
PE=2 SV=2
Length = 343
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 47 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 87
>sp|A2T6X5|RING1_PANTR E3 ubiquitin-protein ligase RING1 OS=Pan troglodytes GN=RING1
PE=3 SV=1
Length = 377
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 3 CPICLGSLRRGQGVAIFTAECSHSFHFCCIAANVQHGNRICPICR 47
CPICL L+ + T EC H F CI ++ GN+ CP CR
Sbjct: 19 CPICLDMLKN----TMTTKECLHRFCSDCIVTALRSGNKECPTCR 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 222,020,800
Number of Sequences: 539616
Number of extensions: 9213328
Number of successful extensions: 25714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 251
Number of HSP's that attempted gapping in prelim test: 25582
Number of HSP's gapped (non-prelim): 310
length of query: 634
length of database: 191,569,459
effective HSP length: 124
effective length of query: 510
effective length of database: 124,657,075
effective search space: 63575108250
effective search space used: 63575108250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)