BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043644
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2
SV=1
Length = 775
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 22/186 (11%)
Query: 41 EAFLGQQRCVSLTPADLESLKSSPGYISSLEDLPVKPDTTHSSQFLGLNS--KSGAWPVS 98
E F Q LT ++ E L+ SP ++ D ++ TT+S +FLGL+ SG W S
Sbjct: 80 EGFAAQ-----LTESEAEILRYSPEVVAVRPDHVLQVQTTYSYKFLGLDGFGNSGVWSKS 134
Query: 99 KFGQDFIIACQTRHHTFISMLYTGVWPESESYDDSGMNEIPSRWKGECKTGTQFNSSLCN 158
+FGQ T I +L TGVWPES S+DD+GM IP +WKG C+ G F+SS CN
Sbjct: 135 RFGQG----------TIIGVLDTGVWPESPSFDDTGMPSIPRKWKGICQEGESFSSSSCN 184
Query: 159 KKLIGAQIFNR--RLL---AKFPNITIAMNSAGDPVGHGTHNSSIAAGSYVEGASYFGYA 213
+KLIGA+ F R R+ + PN+ SA D GHGTH +S GS V A+ G
Sbjct: 185 RKLIGARFFIRGHRVANSPEESPNMPREYISARDSTGHGTHTASTVGGSSVSMANVLGNG 244
Query: 214 TGIARG 219
G+ARG
Sbjct: 245 AGVARG 250
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1
Length = 757
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 114/246 (46%), Gaps = 37/246 (15%)
Query: 2 SWLEAIIGVLRFFLAVASEKATLAHHNNYTAHMGLSAMPEAFL-------GQQRCVS--- 51
S+L + L L ++ + Y HM S MP +F R +S
Sbjct: 4 SFLSSTAFFLLLCLGFCHVSSSSSDQGTYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSA 63
Query: 52 ----------------LTPADLESLKSSPGYISSLEDLPVKPDTTHSSQFLGLNSKSGAW 95
LT + +SL + PG IS L + + TT + FLGL+ +
Sbjct: 64 ELLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHT--- 120
Query: 96 PVSKFGQDFIIACQTRHHTFISMLYTGVWPESESYDDSGMNEIPSRWKGECKTGTQFNSS 155
D + + +L TGVWPES+SY D G IPS WKG C+ GT F +S
Sbjct: 121 ------ADLFPEAGSYSDVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTAS 174
Query: 156 LCNKKLIGAQIFNRRLLAKFPNITIAMNSAG--DPVGHGTHNSSIAAGSYVEGASYFGYA 213
LCN+KLIGA+ F R + I + S D GHGTH SS AAGS VEGAS GYA
Sbjct: 175 LCNRKLIGARFFARGYESTMGPIDESKESRSPRDDDGHGTHTSSTAAGSVVEGASLLGYA 234
Query: 214 TGIARG 219
+G ARG
Sbjct: 235 SGTARG 240
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1
Length = 731
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 20 EKATLAHHNNYTAHMGLSAMPEAFLGQQR------CVSLTPADLESLKSSPGYISSLEDL 73
+ A L H +G + PE+ L + V LT + E + S G +S +
Sbjct: 46 DSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNE 105
Query: 74 PVKPDTTHSSQFLGLNSKSGAWPVSKFGQDFIIACQTRHHTFISMLYTGVWPESESYDDS 133
+ TT S FLG F Q + + +L TG+WPES S+DD
Sbjct: 106 MNELHTTRSWDFLG------------FPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDE 153
Query: 134 GMNEIPSRWKGECKTGTQFNSSLCNKKLIGAQIFNRRLLAKFPNITIAMNSAGDPVGHGT 193
G + P +WKG C+T F CN+K+IGA+ ++ P +N D GHGT
Sbjct: 154 GFSPPPPKWKGTCETSNNFR---CNRKIIGARSYH----IGRPISPGDVNGPRDTNGHGT 206
Query: 194 HNSSIAAGSYVEGASYFGYATGIARGTDGVPL 225
H +S AAG V A+ +G G ARG GVPL
Sbjct: 207 HTASTAAGGLVSQANLYGLGLGTARG--GVPL 236
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1
Length = 749
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 109 QTRHHTFISMLYTGVWPESESYDDSGMNEIPSRWKGECKTGTQFNSSLCNKKLIGAQIFN 168
+ I +L TG+ P+SES+ D G+ P++WKG C G N + CN K+IGA+ F
Sbjct: 134 KAERDVIIGVLDTGITPDSESFLDHGLGPPPAKWKGSC--GPYKNFTGCNNKIIGAKYFK 191
Query: 169 RRLLAKFPNITIAMNSAGDPVGHGTHNSSIAAGSYVEGASYFGYATGIARG 219
P + S D GHGTH SS AG V AS +G A G ARG
Sbjct: 192 HD--GNVPAGEV--RSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARG 238
>sp|Q9K6U8|Y3627_BACHD DegV domain-containing protein BH3627 OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=BH3627 PE=4 SV=1
Length = 283
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 192 GTHNSSIAAGSYVEGASYFGYATGIA 217
GT+ S++ AGS VEG GY +GI+
Sbjct: 96 GTYQSALTAGSMVEGIEVIGYDSGIS 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,922,074
Number of Sequences: 539616
Number of extensions: 3658104
Number of successful extensions: 7994
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7979
Number of HSP's gapped (non-prelim): 8
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)