Your job contains 1 sequence.
>043646
MEIKQLIFRDTTSAPTKGHSNSKTRSESTSSTRQTCSEFKNDHHPPHSKPSEEKLAWLRS
QIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMT
KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEE
RWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS
ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL
GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV
QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY
STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEI
RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLYHFNVKAGNWC
SSQKAIKDLIDKETNNNINNPLASAIQDLRISEKHRNRDTEHLKKINKYASYLDNAKTIA
GLLPEFPCQRSLSEDIDPNILYFRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043646
(625 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5LNM5 - symbol:SPO3178 "Uncharacterized protei... 428 3.7e-66 2
TIGR_CMR|SPO_3178 - symbol:SPO_3178 "conserved hypothetic... 428 3.7e-66 2
DICTYBASE|DDB_G0290035 - symbol:DDB_G0290035 species:4468... 647 7.1e-64 2
TIGR_CMR|CJE_0882 - symbol:CJE_0882 "aminotransferase, pu... 488 1.4e-46 1
WB|WBGene00022195 - symbol:Y71H2B.5 species:6239 "Caenorh... 441 1.5e-40 1
TIGR_CMR|BA_5215 - symbol:BA_5215 "cysteine desulfurase S... 155 2.8e-08 2
UNIPROTKB|P63516 - symbol:csd "Probable cysteine desulfur... 147 4.7e-07 1
TIGR_CMR|CBU_1357 - symbol:CBU_1357 "selenocysteine lyase... 141 2.0e-06 1
TIGR_CMR|SPO_2014 - symbol:SPO_2014 "cysteine desulfurase... 131 1.3e-05 2
UNIPROTKB|Q9EXP2 - symbol:sufS "Cysteine desulfurase" spe... 125 0.00012 2
TIGR_CMR|GSU_2011 - symbol:GSU_2011 "cysteine desulfurase... 118 0.00065 1
TIGR_CMR|CJE_0291 - symbol:CJE_0291 "cysteine desulfurase... 117 0.00085 1
>UNIPROTKB|Q5LNM5 [details] [associations]
symbol:SPO3178 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000192
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0003824 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000103572 OMA:IVGPYEH
RefSeq:YP_168381.1 ProteinModelPortal:Q5LNM5 GeneID:3194038
KEGG:sil:SPO3178 PATRIC:23379803 ProtClustDB:CLSK886352
Uniprot:Q5LNM5
Length = 471
Score = 428 (155.7 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 99/242 (40%), Positives = 138/242 (57%)
Query: 58 LRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQ 117
L +IG + G L YAD+ ASGR+LR +E Y+ VLPFY N+HT SY G
Sbjct: 19 LADGLIGEKIMIPGLNGDVPLVYADYVASGRALRQVEQYVSEYVLPFYANSHTEASYCGA 78
Query: 118 RMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLR 177
+T + A I R +G + DA+IF G+G TA + RL ++GI +
Sbjct: 79 YITGLRRAARAEIARLVGAAEDDAVIFAGSGATAGLNRLVSLLGIAQAA----------- 127
Query: 178 DEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLG 237
R VVF+GPYEHHSN+L WR+S A+VVEI G D+ L++ L + A M+G
Sbjct: 128 ---RPVVFIGPYEHHSNILPWRESGAKVVEIPEAPEGGPDLVVLQTALRAH-AGSDLMIG 183
Query: 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATH 297
+FSA SNVTGI +DT + RLL +G + +D+A GPY+ I++ + DAI ++ H
Sbjct: 184 AFSAASNVTGIITDTVPVTRLLKAHGALSIWDYAGGGPYLPIDMGEGGLRK-DAIVVSPH 242
Query: 298 KF 299
KF
Sbjct: 243 KF 244
Score = 263 (97.6 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 64/187 (34%), Positives = 87/187 (46%)
Query: 344 YLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQV 403
Y D+ RE GTP ++ IRAALAF VK+ +G + I ++E Y AL N ++ +
Sbjct: 284 YSPDLAAREEAGTPNVIGDIRAALAFVVKDAVGADEIARREAHYNAMALEGWAGNPHLIL 343
Query: 404 LGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463
LG R SF V +P+H + +D+ GIQARGGCACAG
Sbjct: 344 LGTDKGHRLPFFSFQVRDGVG-----------RPVHQQLFTRMLSDVHGIQARGGCACAG 392
Query: 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNXXXXXXXXXXXXXXXYG 523
PYGH LL D+ S + + + G KPGW R+ F Y M
Sbjct: 393 PYGHRLLGIDRATSEALHADLAAGREMHKPGWVRLNFSYLMDEATVRFIIDAVNDLSRRT 452
Query: 524 HRFLPLY 530
++PLY
Sbjct: 453 GDYVPLY 459
>TIGR_CMR|SPO_3178 [details] [associations]
symbol:SPO_3178 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000192 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0003824 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000103572 OMA:IVGPYEH
RefSeq:YP_168381.1 ProteinModelPortal:Q5LNM5 GeneID:3194038
KEGG:sil:SPO3178 PATRIC:23379803 ProtClustDB:CLSK886352
Uniprot:Q5LNM5
Length = 471
Score = 428 (155.7 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 99/242 (40%), Positives = 138/242 (57%)
Query: 58 LRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQ 117
L +IG + G L YAD+ ASGR+LR +E Y+ VLPFY N+HT SY G
Sbjct: 19 LADGLIGEKIMIPGLNGDVPLVYADYVASGRALRQVEQYVSEYVLPFYANSHTEASYCGA 78
Query: 118 RMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLR 177
+T + A I R +G + DA+IF G+G TA + RL ++GI +
Sbjct: 79 YITGLRRAARAEIARLVGAAEDDAVIFAGSGATAGLNRLVSLLGIAQAA----------- 127
Query: 178 DEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLG 237
R VVF+GPYEHHSN+L WR+S A+VVEI G D+ L++ L + A M+G
Sbjct: 128 ---RPVVFIGPYEHHSNILPWRESGAKVVEIPEAPEGGPDLVVLQTALRAH-AGSDLMIG 183
Query: 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATH 297
+FSA SNVTGI +DT + RLL +G + +D+A GPY+ I++ + DAI ++ H
Sbjct: 184 AFSAASNVTGIITDTVPVTRLLKAHGALSIWDYAGGGPYLPIDMGEGGLRK-DAIVVSPH 242
Query: 298 KF 299
KF
Sbjct: 243 KF 244
Score = 263 (97.6 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 64/187 (34%), Positives = 87/187 (46%)
Query: 344 YLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQV 403
Y D+ RE GTP ++ IRAALAF VK+ +G + I ++E Y AL N ++ +
Sbjct: 284 YSPDLAAREEAGTPNVIGDIRAALAFVVKDAVGADEIARREAHYNAMALEGWAGNPHLIL 343
Query: 404 LGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463
LG R SF V +P+H + +D+ GIQARGGCACAG
Sbjct: 344 LGTDKGHRLPFFSFQVRDGVG-----------RPVHQQLFTRMLSDVHGIQARGGCACAG 392
Query: 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNXXXXXXXXXXXXXXXYG 523
PYGH LL D+ S + + + G KPGW R+ F Y M
Sbjct: 393 PYGHRLLGIDRATSEALHADLAAGREMHKPGWVRLNFSYLMDEATVRFIIDAVNDLSRRT 452
Query: 524 HRFLPLY 530
++PLY
Sbjct: 453 GDYVPLY 459
>DICTYBASE|DDB_G0290035 [details] [associations]
symbol:DDB_G0290035 species:44689 "Dictyostelium
discoideum" [GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR000192
InterPro:IPR015421 Pfam:PF00266 dictyBase:DDB_G0290035 Pfam:PF01171
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0003824 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:AAFI02000151 RefSeq:XP_635931.1
ProteinModelPortal:Q54GN1 EnsemblProtists:DDB0188699 GeneID:8627452
KEGG:ddi:DDB_G0290035 InParanoid:Q54GN1 OMA:HEARDII Uniprot:Q54GN1
Length = 1165
Score = 647 (232.8 bits), Expect = 7.1e-64, Sum P(2) = 7.1e-64
Identities = 175/523 (33%), Positives = 260/523 (49%)
Query: 76 RRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKR-CL 134
R +TY D TASGRSL IE+Y++N V+P Y NTHT G + T EA +KR C
Sbjct: 96 RLITYCDFTASGRSLESIEEYLLNEVIPLYANTHTLSDATGLQTTLFRREAREIVKRGCR 155
Query: 135 GGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194
G D+++F G+G+TAAI L ++ I K ++S+ + ++ LGPYEHHSN
Sbjct: 156 GSNVDDSLLFIGSGSTAAINALIHILDI--------KYLSSINKKP--LILLGPYEHHSN 205
Query: 195 LLSWRQSLAEVVEIGLDDN------GLLDIEALRSQLELYKA--AKRPMLGSFSACSNVT 246
+L WR++ AEV+ ++N G +D+ L L+ Y +KR ++GSFSA SNV+
Sbjct: 206 ILPWREAGAEVLTCPENNNSKEGIRGGVDLNFLEEILKKYSKLDSKRLIIGSFSAASNVS 265
Query: 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGY--DAIFLATHKFXXXXX 304
GI DT + +L +YG + +D+A + PY+ I++ N + Y D IF + HKF
Sbjct: 266 GIIEDTIKVTEILKRYGALSIWDYACAAPYIPIDMNPFNDNRYKKDVIFFSPHKFLGGVS 325
Query: 305 XXXXXXXSKALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR 364
K L L V YV + T YL + EE+E GTP IV IR
Sbjct: 326 TPGVMLIKKKL--LNNNIPHRPGGGSVLYVTS---NQTTYLSNFEEKEEAGTPDIVGSIR 380
Query: 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN 424
L F ++E+IG + I + E + ++ +N+ +LG+ S+ + F
Sbjct: 381 CGLVFQLREHIGIDNIYQSEIEHSNHLRLKLNKIKNLVLLGDNSINQ-----FEQQQPQQ 435
Query: 425 SSPENMKIER--NKP---LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
P + R N P LH FVA+L NDLFGIQ+R CACAGPY LL +Q +
Sbjct: 436 QLPIISFLIRYENDPTLFLHHNFVASLLNDLFGIQSRASCACAGPYLQCLLGLNQEDNQN 495
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNXXXXXXXXXXXXXXXYGHRFLPLYHFNVKAGNW 539
+ +I + ++PG RI + + G +F+PLY F V +G W
Sbjct: 496 LLESIFEKQEIIRPGMVRINVSFTHTLQEIDFIIKAIEFICLNGWKFMPLYTFVVASGEW 555
Query: 540 CSSQKAIKDLIDKETNNNI---NNPLASAIQDLRISEKHRNRD 579
K K L D+ ++I NN ++ ++ K + D
Sbjct: 556 KHRSKLNK-LPDRRWLSSITYNNNNGSNGNGKMKYQSKRKQID 597
Score = 40 (19.1 bits), Expect = 7.1e-64, Sum P(2) = 7.1e-64
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 550 IDKETNNNINNPLASAIQDLRISE--KHRNRDTEH 582
+D NNNIN+ + + + S K+ N D +
Sbjct: 739 VDNNNNNNINSNDLNNLDNSNNSNIIKNNNEDNNN 773
Score = 39 (18.8 bits), Expect = 9.1e-64, Sum P(2) = 9.1e-64
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 551 DKETNNNINN 560
+K NNNINN
Sbjct: 858 NKNKNNNINN 867
Score = 38 (18.4 bits), Expect = 1.2e-63, Sum P(2) = 1.2e-63
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 551 DKETNNNINNPLASAIQDLRISEKHRNRDTEHLKKINKYASYLDNAKTIAGLLPEFPC 608
+ NNN NN + + + + N + + N L K I+GL+ C
Sbjct: 790 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQVCLLKPKDISGLVESKTC 847
>TIGR_CMR|CJE_0882 [details] [associations]
symbol:CJE_0882 "aminotransferase, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0008483 "transaminase activity"
evidence=ISS] InterPro:IPR000192 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008483 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0520 RefSeq:YP_178884.1 ProteinModelPortal:Q5HV01
STRING:Q5HV01 GeneID:3231395 KEGG:cjr:CJE0882 PATRIC:20043531
HOGENOM:HOG000103572 OMA:IVGPYEH ProtClustDB:CLSK872484
BioCyc:CJEJ195099:GJC0-902-MONOMER Uniprot:Q5HV01
Length = 422
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 122/366 (33%), Positives = 200/366 (54%)
Query: 75 KRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHE-ASNYIKRC 133
K+ + + D TAS +L+ +E I + +LP Y NTH SDS + T+ ++E A IK+
Sbjct: 13 KKGILHFDFTASALALKCVEKEI-SKILPTYANTH-SDSSLNSFKTQQIYEQARKDIKKS 70
Query: 134 LGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHS 193
L + A+I CG G+++AIK+ QE++GI +P +++++ T + +V +GPYEHHS
Sbjct: 71 LSLDENFALIACGTGSSSAIKKFQELIGIYIPPLVKERYFTQIDKNTLPLVIVGPYEHHS 130
Query: 194 NLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTR 253
N LS+R+ L E + I LD NG +D + L L+ K KR ++ SFS SNVTGI SD +
Sbjct: 131 NELSFREGLCECIRIPLDKNGEIDFDFLEKTLQ--KNKKRKIIASFSLASNVTGILSDYK 188
Query: 254 SIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFXXXXXXXXXXXXSK 313
I+ ++ ++ G FD ++ PY I+ + YDA+F+++HK K
Sbjct: 189 RISEMVRKFKGIVAFDASSFIPYKNISCQY-----YDALFISSHKLIGGIGGSGLLAIKK 243
Query: 314 ALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE 373
L V YV+ + YL + E E GGTP I+Q+IRA+LAF +K+
Sbjct: 244 ---DLCGNKPSFAAGGTVGYVSRTSQ---CYLCNEEALEEGGTPGILQLIRASLAFKIKD 297
Query: 374 YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE 433
IG + I+K+E++ + ++ N+ +L ++K + L ++ SP ++ E
Sbjct: 298 SIGIKNIEKKEEILKDYFFEKLKTIPNL-ILYAKNLKTR--LPIFAFNIKGISPFDIAYE 354
Query: 434 RNKPLH 439
+K H
Sbjct: 355 LSKKYH 360
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/159 (33%), Positives = 81/159 (50%)
Query: 344 YLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQV 403
YL + E E GGTP I+Q+IRA+LAF +K+ IG + I+K+E++ + ++ N+ +
Sbjct: 268 YLCNEEALEEGGTPGILQLIRASLAFKIKDSIGIKNIEKKEEILKDYFFEKLKTIPNL-I 326
Query: 404 LGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463
L ++K + L ++ SP ++ E +K H I+ R GCACAG
Sbjct: 327 LYAKNLKTR--LPIFAFNIKGISPFDIAYELSKKYH-------------IETRAGCACAG 371
Query: 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPY 502
PYGH LL + L+ KPGW RI+ Y
Sbjct: 372 PYGHDLLGLKDNQKLK-----------TKPGWLRISLHY 399
>WB|WBGene00022195 [details] [associations]
symbol:Y71H2B.5 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] InterPro:IPR000192
InterPro:IPR015421 Pfam:PF00266 Pfam:PF01171 GO:GO:0030170
Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0003824
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:FO081557 OMA:HEARDII RefSeq:NP_497589.3
ProteinModelPortal:Q9N4F1 SMR:Q9N4F1 PaxDb:Q9N4F1
EnsemblMetazoa:Y71H2B.5 GeneID:175380 KEGG:cel:CELE_Y71H2B.5
UCSC:Y71H2B.5 CTD:175380 WormBase:Y71H2B.5 HOGENOM:HOG000019054
InParanoid:Q9N4F1 NextBio:887910 Uniprot:Q9N4F1
Length = 957
Score = 441 (160.3 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 121/387 (31%), Positives = 185/387 (47%)
Query: 172 LITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQL-ELYKA 230
L++ +D+E +V EHHSNLL WR+ E I +NG +D+ L++ L E+ ++
Sbjct: 141 LMSDGKDDEEVIVVHSSQEHHSNLLPWRKIAKECRNIEELENGQIDLVHLQNVLKEIRES 200
Query: 231 -AKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGY 289
++G+F A SN+TGI D +++ ++L + A +DFA++ PY+ I +
Sbjct: 201 HGSIKIIGTFCAASNLTGILIDIQNVTKILKMFDAIAIWDFASAAPYIPILVNGTY--PL 258
Query: 290 DAIFLATHKFXXXXXXXXXXXXSKALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIE 349
DA+F + HKF K++ Q V +VN+ DE YL+++E
Sbjct: 259 DAVFFSGHKFPGGVSSPGVLIVKKSIIQ--ATKPKRIGGGTVFFVNSTDE---WYLKEVE 313
Query: 350 ERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSV 409
RE GGT V +R A+A +K IG + IK E L +I +N+ +LG + V
Sbjct: 314 HREEGGTADAVGAVRLAMAVKMKRSIGEDTIKNLESSISHLVLQKIRTIENLVLLGPSVV 373
Query: 410 K-RQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468
R + SFL+ P++ H +++ L NDLFGIQ R GC CAGPY
Sbjct: 374 DHRLPVFSFLI-----RDPQSQLF-----FHHNYISVLLNDLFGIQTRAGCMCAGPYSQK 423
Query: 469 LLAFDQTRSLEIRSAIQKG------YLG----------VKPGWTRITFPYYMSNXXXXXX 512
LL D+ S SAIQ+ +L ++PG+TRI+FPY+
Sbjct: 424 LLGIDEELSQRFVSAIQESPDLDRTHLRRQAEYSQQEFLRPGFTRISFPYFFKMAEVDEI 483
Query: 513 XXXXXXXXXYGHRFLPLYHFNVKAGNW 539
+ FL LY N + G W
Sbjct: 484 LEAIRFIAKHAADFLHLYQVNCETGEW 510
Score = 403 (146.9 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 102/302 (33%), Positives = 157/302 (51%)
Query: 51 SEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHT 110
S E L+W+R+ IG D FG R++TY D+TAS R+ IE YI + VLPFYGNTH+
Sbjct: 33 STELLSWMRNDEIGRKSVMDGPFGARKVTYCDYTASARAFTSIETYIQHEVLPFYGNTHS 92
Query: 111 SDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRD 170
S + ++ T +HEA I+ G G D++IF G+G+T A++ L +M D
Sbjct: 93 SVTVTAEQTTLFMHEARQEIRAFSGCGDQDSVIFTGSGSTCAVELLVHLMS--------D 144
Query: 171 KLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQL-ELYK 229
+D+E +V EHHSNLL WR+ E I +NG +D+ L++ L E+ +
Sbjct: 145 G-----KDDEEVIVVHSSQEHHSNLLPWRKIAKECRNIEELENGQIDLVHLQNVLKEIRE 199
Query: 230 A-AKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDG 288
+ ++G+F A SN+TGI D +++ ++L + A +DFA++ PY+ I +
Sbjct: 200 SHGSIKIIGTFCAASNLTGILIDIQNVTKILKMFDAIAIWDFASAAPYIPILVNGTY--P 257
Query: 289 YDAIFLATHKFXXXXXXXXXXXXSKALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDI 348
DA+F + HKF K++ Q V +VN+ DE +E
Sbjct: 258 LDAVFFSGHKFPGGVSSPGVLIVKKSIIQ--ATKPKRIGGGTVFFVNSTDEWYLKEVEHR 315
Query: 349 EE 350
EE
Sbjct: 316 EE 317
>TIGR_CMR|BA_5215 [details] [associations]
symbol:BA_5215 "cysteine desulfurase SufS" species:198094
"Bacillus anthracis str. Ames" [GO:0004123 "cystathionine
gamma-lyase activity" evidence=ISS] [GO:0016226 "iron-sulfur
cluster assembly" evidence=ISS] InterPro:IPR000192
InterPro:IPR010970 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00266 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR GO:GO:0006534
PROSITE:PS00595 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 KO:K11717 TIGRFAMs:TIGR01979 HSSP:P77444
OMA:CAQPIMD RefSeq:NP_847397.1 RefSeq:YP_021870.1
ProteinModelPortal:Q81XL9 SMR:Q81XL9 DNASU:1084640
EnsemblBacteria:EBBACT00000010048 EnsemblBacteria:EBBACT00000017353
GeneID:1084640 GeneID:2814804 KEGG:ban:BA_5215 KEGG:bar:GBAA_5215
PATRIC:18788062 ProtClustDB:CLSK887839
BioCyc:BANT261594:GJ7F-5090-MONOMER Uniprot:Q81XL9
Length = 406
Score = 155 (59.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 71/340 (20%), Positives = 132/340 (38%)
Query: 70 DYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNY 129
D ++L Y D A+ + + + + + N H +G + T A
Sbjct: 14 DQKVNGKQLVYFDSAATSQKPIQVIETLERYYKEYNSNVHRGVHTLGTKATDAYEGAREK 73
Query: 130 IKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPY 189
+++ + + IIF GTT A+ + G+ ++++ + V+
Sbjct: 74 VRKFINAKSMEEIIFT-CGTTTALNTVAASYGLE-----------NVKEGDEIVISY--M 119
Query: 190 EHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245
EHHSN++ W+Q A + + L +G + IE R + + S SNV
Sbjct: 120 EHHSNIIPWQQVAKKTGATLKYLPLQPDGTISIEDARQTI-----TPNTKIVSIMYVSNV 174
Query: 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFXXXXXX 305
G + + I + H+ G D A S P++K++++ N D Y L+ HK
Sbjct: 175 LGTINPVKEIGAIAHENGAIMVVDGAQSTPHMKVDVQDLNCDFYA---LSAHKMCGPTGI 231
Query: 306 XXXXXXSKALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRA 365
+ L + +++V D +++ + E + + GTP I I
Sbjct: 232 GVLYGKKELLNNMEPIEFGGEM---IDFV---DLQESTWKE-LPWKFEAGTPIIGNAIGL 284
Query: 366 ALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLG 405
A E IG + I+K E + AL R+ + + G
Sbjct: 285 GAAIDFLEEIGLDNIEKHEHELAQYALERLSEVDGVTIYG 324
Score = 46 (21.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 438 LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477
+H VAT+ D+ GI R G CA P L A R+
Sbjct: 339 VHPHDVATVL-DVEGIAVRAGHHCAQPLMKWLKASSTARA 377
>UNIPROTKB|P63516 [details] [associations]
symbol:csd "Probable cysteine desulfurase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000192
InterPro:IPR010970 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00266 GO:GO:0005886 GO:GO:0040007 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006534
PROSITE:PS00595 eggNOG:COG0520 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 PIR:C70872 RefSeq:NP_215980.1 RefSeq:NP_335961.1
RefSeq:YP_006514847.1 ProteinModelPortal:P63516 SMR:P63516
PRIDE:P63516 EnsemblBacteria:EBMYCT00000003575
EnsemblBacteria:EBMYCT00000071942 GeneID:13320056 GeneID:886565
GeneID:924456 KEGG:mtc:MT1511 KEGG:mtu:Rv1464 KEGG:mtv:RVBD_1464
PATRIC:18125088 TubercuList:Rv1464 KO:K11717 OMA:MPPFITG
ProtClustDB:CLSK791179 TIGRFAMs:TIGR01979 Uniprot:P63516
Length = 417
Score = 147 (56.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 68/290 (23%), Positives = 119/290 (41%)
Query: 137 GQADAIIFCGAGTTAAI--KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194
G+AD +F GA T + K E + + V ++ D V+ EHH+N
Sbjct: 78 GRADIALFVGADTDELVFTKNATEALNL-VSYVLGDSRFERAVGPGD-VIVTTELEHHAN 135
Query: 195 LLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS 250
L+ W R++ A + G+ D+G +D+++L L+ R + +F+ SNVTG+ +
Sbjct: 136 LIPWQELARRTGATLRWYGVTDDGRIDLDSL--YLD-----DRVKVVAFTHHSNVTGVLT 188
Query: 251 DTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFXXXXXXXXXXX 310
+ HQ G D S P+ ++L +D A F + HK
Sbjct: 189 PVSELVSRAHQSGALTVLDACQSVPHQPVDLHELGVDF--AAF-SGHKMLGPNGIGVLYG 245
Query: 311 XSKALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFW 370
+ L Q+ V A Y +R GTP Q++ A A
Sbjct: 246 RRELLAQMPPFLTGGSMIETVTMEGA------TYAP-APQRFEAGTPMTSQVVGLAAAAR 298
Query: 371 VKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVK-RQAILSFLV 419
IG ++ E + +A+ + +++LG TS++ R + ++F+V
Sbjct: 299 YLGAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAFVV 348
>TIGR_CMR|CBU_1357 [details] [associations]
symbol:CBU_1357 "selenocysteine lyase" species:227377
"Coxiella burnetii RSA 493" [GO:0009000 "selenocysteine lyase
activity" evidence=ISS] [GO:0016261 "selenocysteine catabolic
process" evidence=ISS] InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006534 EMBL:AE016828
GenomeReviews:AE016828_GR PROSITE:PS00595 GO:GO:0016829
HOGENOM:HOG000017511 GO:GO:0031071 InterPro:IPR020578 KO:K11717
TIGRFAMs:TIGR01979 HSSP:P77444 RefSeq:NP_820346.1
ProteinModelPortal:Q83BY0 SMR:Q83BY0 PRIDE:Q83BY0 GeneID:1209263
KEGG:cbu:CBU_1357 PATRIC:17931457 OMA:DEVIFTR
ProtClustDB:CLSK914726 BioCyc:CBUR227377:GJ7S-1347-MONOMER
Uniprot:Q83BY0
Length = 405
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 63/241 (26%), Positives = 105/241 (43%)
Query: 184 VFLGPYEHHSNLLSWRQSLAEVVE-----IGLDDNGLLDIEALRSQLELYKAAKRPMLGS 238
+ + EHHSN++ W Q L E V I +DDNG+LDI+A + L KR L
Sbjct: 115 ILISAMEHHSNIVPW-QLLCERVNAKLKVIPVDDNGVLDIDAYQRLL-----TKRTKLVG 168
Query: 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHK 298
SNV G + + + +L HQ D A + + +++++ + D Y +F ++HK
Sbjct: 169 LIHISNVLGTVNPVKDMIQLAHQNKTPVLLDGAQAISHREVDVQDLDCDFY--VF-SSHK 225
Query: 299 FXXXXXXXXXXXXSKALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIEERENGGTPQ 358
+K L + V++ EK T Y + + GTP
Sbjct: 226 LYGPTGVGVLYGKAKWLETMPPYQGGGDMISRVSF-----EK-TDY-NVVPYKFEAGTPN 278
Query: 359 IVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFL 418
+ +I A IG+E IK E+ + A ++ ++++GN K AI SF+
Sbjct: 279 MGGVIGMGAAIDYVTRIGFEKIKLHENELMCYAAEQLQKIPGLRIIGNAPDKASAI-SFV 337
Query: 419 V 419
+
Sbjct: 338 M 338
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 57/217 (26%), Positives = 91/217 (41%)
Query: 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137
L Y D A+ + + + D + + N H + +R T+ E+ IK +
Sbjct: 23 LVYLDTGATAQKPQAVMDAVSHYYCQDNANVHRGIYELSERATRNYEESREKIKTFINAA 82
Query: 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197
A IIF G T +I + G + R DE + + EHHSN++
Sbjct: 83 DAREIIFTH-GATGSINLVAASFGAL--QVKRG-------DE----ILISAMEHHSNIVP 128
Query: 198 WRQSLAEVVE-----IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT 252
W Q L E V I +DDNG+LDI+A + L KR L SNV G +
Sbjct: 129 W-QLLCERVNAKLKVIPVDDNGVLDIDAYQRLL-----TKRTKLVGLIHISNVLGTVNPV 182
Query: 253 RSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGY 289
+ + +L HQ D A + + +++++ + D Y
Sbjct: 183 KDMIQLAHQNKTPVLLDGAQAISHREVDVQDLDCDFY 219
>TIGR_CMR|SPO_2014 [details] [associations]
symbol:SPO_2014 "cysteine desulfurase SufS" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISS] [GO:0031071 "cysteine desulfurase activity"
evidence=ISS] InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006534 PROSITE:PS00595 HOGENOM:HOG000017511 GO:GO:0031071
InterPro:IPR020578 KO:K11717 TIGRFAMs:TIGR01979 RefSeq:YP_167246.1
ProteinModelPortal:Q5LRV9 GeneID:3193329 KEGG:sil:SPO2014
PATRIC:23377359 ProtClustDB:CLSK933713 Uniprot:Q5LRV9
Length = 406
Score = 131 (51.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 50/216 (23%), Positives = 87/216 (40%)
Query: 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137
LTY D+ AS + + + D + Y N H ++ T+ + R L G
Sbjct: 23 LTYLDNGASAQKPQAVIDAVTRGYAEEYANVHRGLHFLSNLATEKYEAVRGIVARFLNAG 82
Query: 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197
D I+ +GTT I + G +P + DE + L EHH+N++
Sbjct: 83 SEDEIVL-NSGTTEGINMV--AYGWAMPQMQAG-------DE----IVLSTMEHHANIVP 128
Query: 198 W---RQSLAEVVE-IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTR 253
W R+ V++ + + +G LD +A+ + R L + + CSNV G D +
Sbjct: 129 WHFLRERQGVVLKWVDPEPDGSLDPQAVLDAI-----GPRTKLVAITHCSNVLGTVVDVK 183
Query: 254 SIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGY 289
SI G D + ++ ++++ D Y
Sbjct: 184 SICAGARAKGVPVLVDGSQGAVHMPVDVQDLGCDFY 219
Score = 46 (21.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 439 HGPFVATLFNDLFGIQARGGCACAGP 464
H ++T+ D G+ R G CAGP
Sbjct: 343 HAHDISTIL-DKKGVAVRAGHHCAGP 367
>UNIPROTKB|Q9EXP2 [details] [associations]
symbol:sufS "Cysteine desulfurase" species:198628 "Dickeya
dadantii 3937" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_01831 InterPro:IPR000192 InterPro:IPR010970
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00266 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006534 PROSITE:PS00595
HOGENOM:HOG000017511 GO:GO:0031071 InterPro:IPR020578 KO:K11717
TIGRFAMs:TIGR01979 UniPathway:UPA00266 GO:GO:0009000 EMBL:AJ301654
EMBL:CP002038 GenomeReviews:CP002038_GR RefSeq:YP_003883473.1
ProteinModelPortal:Q9EXP2 SMR:Q9EXP2 IntAct:Q9EXP2 GeneID:9734155
KEGG:ddd:Dda3937_03665 PATRIC:42317771 OMA:EMRPFIG
BioCyc:DDAD198628:GHFQ-2769-MONOMER Uniprot:Q9EXP2
Length = 412
Score = 125 (49.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 77/345 (22%), Positives = 128/345 (37%)
Query: 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137
L Y D AS + + D + L Y H + R T + E + +
Sbjct: 29 LAYLDSAASAQKPLAVIDRERDFYLHEYAAVHRGIHTLSARATSAMEEVRAKVATFIHAA 88
Query: 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197
A+ I+F GTT AI + G T D L+ S EHH+N++
Sbjct: 89 SAEDIVFV-RGTTEAINLVANSYGRTAFQ-PGDNLVIS------------EMEHHANIVP 134
Query: 198 WRQSLAEVVEIGL-----DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT 252
W Q LA+ + L D+G LD+ L + L+ +R L + + SNV G +
Sbjct: 135 W-QMLAQARGLTLRVLPITDDGELDMAQLPALLD-----ERTRLVAVTQVSNVLGTVNPL 188
Query: 253 RSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFXXXXXXXXXXXXS 312
I R H G D A + + +++++ + D Y + HK S
Sbjct: 189 AEIIRQAHACGAKVLVDGAQAVMHQAVDVQALDCDFYA---FSGHKLYGPSGIGVLYGKS 245
Query: 313 KALYQLXXXXXXXXXXXXVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVK 372
+ L + V+ T Y D R G+P + +I A
Sbjct: 246 ELLQAMPPWEGGGAMIREVSLTQG-----TTYA-DPPWRFEAGSPHVAGIIGLGAALDYV 299
Query: 373 EYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSF 417
+G + I+ E + + AL + +++ G V RQ +++F
Sbjct: 300 SALGVDAIQAHEGLLMRYALASLAEVPTLRLYG--PVHRQGVIAF 342
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 439 HGPFVATLFNDLFGIQARGGCACAGP 464
H F F D +GI R G CA P
Sbjct: 347 HHAFDVGSFLDQYGIAIRTGHHCAMP 372
>TIGR_CMR|GSU_2011 [details] [associations]
symbol:GSU_2011 "cysteine desulfurase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004123 "cystathionine
gamma-lyase activity" evidence=ISS] [GO:0016226 "iron-sulfur
cluster assembly" evidence=ISS] InterPro:IPR000192
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR017772
Pfam:PF00266 GO:GO:0030170 GO:GO:0006520 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE017180 GenomeReviews:AE017180_GR PROSITE:PS00595
GO:GO:0031071 InterPro:IPR020578 HOGENOM:HOG000017510 KO:K04487
InterPro:IPR016454 PIRSF:PIRSF005572 TIGRFAMs:TIGR03402
RefSeq:NP_953060.1 ProteinModelPortal:Q74BN0 GeneID:2688069
KEGG:gsu:GSU2011 PATRIC:22026883 OMA:CAHGSIR ProtClustDB:CLSK828679
BioCyc:GSUL243231:GH27-2045-MONOMER Uniprot:Q74BN0
Length = 391
Score = 118 (46.6 bits), Expect = 0.00065, P = 0.00065
Identities = 61/217 (28%), Positives = 99/217 (45%)
Query: 80 YADHTASGRSLRYIEDYIINNVLPF----YGNTHTSDSYVGQRMTKMVHEASNYIKRCLG 135
Y D+ A+ + +++ + + P+ YGN +S Y G ++ + V EA N + LG
Sbjct: 5 YLDNNATTK----VDEAVFEEMRPYFCDLYGNP-SSMHYFGGQVQRKVDEARNRVAALLG 59
Query: 136 GGQADAIIFCGAGT---TAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH 192
+ IIF GT AAI+ EV P R +IT+ R E V+ L
Sbjct: 60 A-LPEEIIFTACGTESDNAAIRSALEVF----PE--RRHIITT-RVEHPAVLTL------ 105
Query: 193 SNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT 252
LS R V E+G+D G LD+ LRS ++ + ++ S +N TG+
Sbjct: 106 CRNLSKRGY--RVTELGVDGEGRLDLNELRSAID-----EDTVVVSVMWANNETGVIFPV 158
Query: 253 RSIARLLHQYGGFACF--DFAASGPYVKINLRSRNID 287
I+R++ + G A F D + + IN+ + +ID
Sbjct: 159 EEISRIVKEKGKGALFHTDAVQAVGKIPINMATSSID 195
>TIGR_CMR|CJE_0291 [details] [associations]
symbol:CJE_0291 "cysteine desulfurase, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0009093 "cysteine
catabolic process" evidence=ISS] [GO:0016846 "carbon-sulfur lyase
activity" evidence=ISS] InterPro:IPR000192 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR017773 Pfam:PF00266 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006534 EMBL:CP000025
GenomeReviews:CP000025_GR PROSITE:PS00595 GO:GO:0031071
InterPro:IPR020578 eggNOG:COG1104 HOGENOM:HOG000017510 KO:K04487
InterPro:IPR016454 PIRSF:PIRSF005572 RefSeq:YP_178313.1
ProteinModelPortal:Q5HWM2 STRING:Q5HWM2 GeneID:3231053
KEGG:cjr:CJE0291 PATRIC:20042280 OMA:FGSETHP ProtClustDB:CLSK872301
BioCyc:CJEJ195099:GJC0-296-MONOMER TIGRFAMs:TIGR03403
Uniprot:Q5HWM2
Length = 393
Score = 117 (46.2 bits), Expect = 0.00085, P = 0.00085
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 101 VLPF----YGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRL 156
+LPF YGN ++ Y G + EA + + LG D I+ T+ A + +
Sbjct: 21 MLPFLKDIYGNPNSLHQY-GSATHPALREALDKLYAGLGANDLDDIVI----TSCATESI 75
Query: 157 QEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS--WRQSLA-EVVEIGLDDN 213
V+ + D ++ D ER V + EH + + + +SL +V+E+ +++
Sbjct: 76 NWVL----KGVYFDHIL----DRERNEVIISSVEHPAVAAAAYFLKSLGVKVIELPVNEE 127
Query: 214 GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273
G+ +E LR + + + L S +N TG+ D +++A L H++G D +
Sbjct: 128 GVSTVEDLRKVI-----SDKTALVSVMWANNETGMIFDIKAMAELAHEFGALFHTDATQA 182
Query: 274 GPYVKINLRSRNIDGYDAIFLATHKF 299
+K+NL +D A F A HKF
Sbjct: 183 VGKIKVNLTQVGVDF--ASFSA-HKF 205
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 625 568 0.00079 120 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 620 (66 KB)
Total size of DFA: 325 KB (2166 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.72u 0.11s 44.83t Elapsed: 00:00:02
Total cpu time: 44.73u 0.11s 44.84t Elapsed: 00:00:02
Start: Fri May 10 11:27:38 2013 End: Fri May 10 11:27:40 2013