BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043646
(625 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P99177|CSD_STAAN Probable cysteine desulfurase OS=Staphylococcus aureus (strain
N315) GN=csd PE=1 SV=1
Length = 413
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 58/404 (14%)
Query: 69 FDYSFGKRRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124
D +RL Y D TA+ ++ L +EDY + N H +G T
Sbjct: 18 LDQKVNGKRLAYLDSTATSQTPMQVLNVLEDYYKR----YNSNVHRGVHTLGSLATDGYE 73
Query: 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184
A ++R + + IIF GTTA+I + G EE +
Sbjct: 74 NARETVRRFINAKYFEEIIFT-RGTTASINLVAHSYG-------------DANVEEGDEI 119
Query: 185 FLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240
+ EHH+N++ W+Q A + I + +G L+IE ++ + + + + +
Sbjct: 120 VVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTIN-----DKTKIVAIA 174
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNV G +D ++IA + HQ+G D A + P++K++++ N D Y + HK L
Sbjct: 175 HISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYS---FSGHKML 231
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L Q P GG +++V+ +D D+ + GTP I
Sbjct: 232 GPTGI-GVLFGKRELLQ--KMEPIEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIA 284
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420
Q I A A E IG++ I K E A ++ + I++ G +R +++F +
Sbjct: 285 QAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNL- 343
Query: 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT D G+ R G CA P
Sbjct: 344 ---------------QDVHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|P63518|CSD_STAAM Probable cysteine desulfurase OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=csd PE=1 SV=1
Length = 413
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 58/404 (14%)
Query: 69 FDYSFGKRRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124
D +RL Y D TA+ ++ L +EDY + N H +G T
Sbjct: 18 LDQKVNGKRLAYLDSTATSQTPMQVLNVLEDYYKR----YNSNVHRGVHTLGSLATDGYE 73
Query: 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184
A ++R + + IIF GTTA+I + G EE +
Sbjct: 74 NARETVRRFINAKYFEEIIFT-RGTTASINLVAHSYG-------------DANVEEGDEI 119
Query: 185 FLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240
+ EHH+N++ W+Q A + I + +G L+IE ++ + + + + +
Sbjct: 120 VVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTIN-----DKTKIVAIA 174
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNV G +D ++IA + HQ+G D A + P++K++++ N D Y + HK L
Sbjct: 175 HISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYS---FSGHKML 231
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L Q P GG +++V+ +D D+ + GTP I
Sbjct: 232 GPTGI-GVLFGKRELLQ--KMEPIEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIA 284
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420
Q I A A E IG++ I K E A ++ + I++ G +R +++F +
Sbjct: 285 QAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNL- 343
Query: 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT D G+ R G CA P
Sbjct: 344 ---------------QDVHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q8NXH0|CSD_STAAW Probable cysteine desulfurase OS=Staphylococcus aureus (strain MW2)
GN=csd PE=3 SV=1
Length = 413
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 58/404 (14%)
Query: 69 FDYSFGKRRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124
D +RL Y D TA+ ++ L +EDY + N H +G T
Sbjct: 18 LDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKR----YNSNVHRGVHTLGSLATDGYE 73
Query: 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184
A ++R + + IIF GTTA+I + G EE +
Sbjct: 74 NARETVRRFINAKYFEEIIFT-RGTTASINLVAHSYG-------------DANVEEGDEI 119
Query: 185 FLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240
+ EHH+N++ W+Q A + I + +G L+IE ++ + + + + +
Sbjct: 120 VVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTIN-----DKTKIVAIA 174
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNV G +D ++IA + HQ+G D A + P++K++++ N D Y + HK L
Sbjct: 175 HISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYS---FSGHKML 231
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L Q P GG +++V+ +D D+ + GTP I
Sbjct: 232 GPTGI-GVLFGKRELLQ--KMEPIEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIA 284
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420
Q I A A E IG++ I K E A ++ + I++ G +R +++F +
Sbjct: 285 QAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNL- 343
Query: 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT D G+ R G CA P
Sbjct: 344 ---------------QDVHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q6GB11|CSD_STAAS Probable cysteine desulfurase OS=Staphylococcus aureus (strain
MSSA476) GN=csd PE=3 SV=1
Length = 413
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 58/404 (14%)
Query: 69 FDYSFGKRRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124
D +RL Y D TA+ ++ L +EDY + N H +G T
Sbjct: 18 LDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKR----YNSNVHRGVHTLGSLATDGYE 73
Query: 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184
A ++R + + IIF GTTA+I + G EE +
Sbjct: 74 NARETVRRFINAKYFEEIIFT-RGTTASINLVAHSYG-------------DANVEEGDEI 119
Query: 185 FLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240
+ EHH+N++ W+Q A + I + +G L+IE ++ + + + + +
Sbjct: 120 VVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTIN-----DKTKIVAIA 174
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNV G +D ++IA + HQ+G D A + P++K++++ N D Y + HK L
Sbjct: 175 HISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYS---FSGHKML 231
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L Q P GG +++V+ +D D+ + GTP I
Sbjct: 232 GPTGI-GVLFGKRELLQ--KMEPIEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIA 284
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420
Q I A A E IG++ I K E A ++ + I++ G +R +++F +
Sbjct: 285 QAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNL- 343
Query: 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT D G+ R G CA P
Sbjct: 344 ---------------QDVHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q6GIH2|CSD_STAAR Probable cysteine desulfurase OS=Staphylococcus aureus (strain
MRSA252) GN=csd PE=3 SV=1
Length = 413
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 58/404 (14%)
Query: 69 FDYSFGKRRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124
D +RL Y D TA+ ++ L +EDY + N H +G T
Sbjct: 18 LDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKR----YNSNVHRGVHTLGSLATDGYE 73
Query: 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184
A ++R + + IIF GTTA+I + G EE +
Sbjct: 74 NARETVRRFINAKYFEEIIFT-RGTTASINLVAHSYG-------------DANVEEGDEI 119
Query: 185 FLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240
+ EHH+N++ W+Q A + I + +G L+IE ++ + + + + +
Sbjct: 120 VVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTIN-----DKTKIVAIA 174
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNV G +D ++IA + HQ+G D A + P++K++++ N D Y + HK L
Sbjct: 175 HISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYS---FSGHKML 231
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L Q P GG +++V+ +D D+ + GTP I
Sbjct: 232 GPTGI-GVLFGKRELLQ--KMEPIEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIA 284
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420
Q I A A E IG++ I K E A ++ + I++ G +R +++F +
Sbjct: 285 QAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNL- 343
Query: 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT D G+ R G CA P
Sbjct: 344 ---------------QDVHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q5HHH0|CSD_STAAC Probable cysteine desulfurase OS=Staphylococcus aureus (strain COL)
GN=csd PE=3 SV=1
Length = 413
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 58/404 (14%)
Query: 69 FDYSFGKRRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124
D +RL Y D TA+ ++ L +EDY + N H +G T
Sbjct: 18 LDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKR----YNSNVHRGVHTLGSLATDGYE 73
Query: 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184
A ++R + + IIF GTTA+I + G EE +
Sbjct: 74 NARETVRRFINAKYFEEIIFT-RGTTASINLVAHSYG-------------DANVEEGDEI 119
Query: 185 FLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240
+ EHH+N++ W+Q A + I + +G L+IE ++ + + + + +
Sbjct: 120 VVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTIN-----DKTKIVAIA 174
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNV G +D ++IA + HQ+G D A + P++K++++ N D Y + HK L
Sbjct: 175 HISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYS---FSGHKML 231
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L Q P GG +++V+ +D D+ + GTP I
Sbjct: 232 GPTGI-GVLFGKRELLQ--KMEPIEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIA 284
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420
Q I A A E IG++ I K E A ++ + I++ G +R +++F +
Sbjct: 285 QAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNL- 343
Query: 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT D G+ R G CA P
Sbjct: 344 ---------------QDVHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q8CTA4|CSD_STAES Probable cysteine desulfurase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=csd PE=3 SV=1
Length = 413
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 170/397 (42%), Gaps = 58/397 (14%)
Query: 76 RRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIK 131
+RL Y D TA+ ++ L ++DY + N H +G T A ++
Sbjct: 25 KRLAYLDSTATSQTPVQVLNVLDDYYKR----YNSNVHRGVHTLGSLATDGYENARETVR 80
Query: 132 RCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEH 191
R + + IIF GTTA+I + G S + ++T + EH
Sbjct: 81 RFINAKYFEEIIFT-RGTTASINIVAHSYGDANISEGDEIVVTEM-------------EH 126
Query: 192 HSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTG 247
H+N++ W+Q A + I + +G L ++ +++ + + + + + SNV G
Sbjct: 127 HANIVPWQQLAKRKNATLKFIPMTKDGELQLDDIKATIN-----DKTKIVAIAHVSNVLG 181
Query: 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPG 307
+D ++IA++ H++G D A S P++ ++++ + D Y + HK LG G G
Sbjct: 182 TINDVKTIAKIAHEHGAVISVDGAQSAPHMALDMQDIDADFYS---FSGHKMLGPTGI-G 237
Query: 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAAL 367
+L + L Q + P GG +++V+ +D D+ + GTP I Q I A
Sbjct: 238 VLYGKRELLQ--NMEPVEFGGDMIDFVSKYDST----WADLPTKFEAGTPLIAQAIGLAE 291
Query: 368 AFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427
A E +G+ I + E E A ++L +++ G +R +++F +
Sbjct: 292 AIHYIENLGFNAIHQHEKELTEYAYEQMLTIDGLEIYGPPKDRRAGVITFNL-------- 343
Query: 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+H VAT D G+ R G CA P
Sbjct: 344 --------ADIHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q5HQQ0|CSD_STAEQ Probable cysteine desulfurase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=csd PE=3 SV=1
Length = 413
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 170/397 (42%), Gaps = 58/397 (14%)
Query: 76 RRLTYADHTASGRS----LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIK 131
+RL Y D TA+ ++ L ++DY + N H +G T A ++
Sbjct: 25 KRLAYLDSTATSQTPVQVLNVLDDYYKR----YNSNVHRGVHTLGSLATDGYENARETVR 80
Query: 132 RCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEH 191
R + + IIF GTTA+I + G S + ++T + EH
Sbjct: 81 RFINAKYFEEIIFT-RGTTASINIVAHSYGDANISEGDEIVVTEM-------------EH 126
Query: 192 HSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTG 247
H+N++ W+Q A + I + +G L ++ +++ + + + + + SNV G
Sbjct: 127 HANIVPWQQLAKRKNATLKFIPMTKDGELQLDDIKATIN-----DKTKIVAIAHVSNVLG 181
Query: 248 IYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPG 307
+D ++IA++ H++G D A S P++ ++++ + D Y + HK LG G G
Sbjct: 182 TINDVKTIAKIAHEHGAVISVDGAQSAPHMALDMQDIDADFYS---FSGHKMLGPTGI-G 237
Query: 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAAL 367
+L + L Q + P GG +++V+ +D D+ + GTP I Q I A
Sbjct: 238 VLYGKRELLQ--NMEPVEFGGDMIDFVSKYDAT----WADLPTKFEAGTPLIAQAIGLAE 291
Query: 368 AFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427
A E +G+ I + E E A ++L +++ G +R +++F +
Sbjct: 292 AIHYIENLGFNAIHQHEKELTEYAYEQMLTIDGLEIYGPPKDRRAGVITFNL-------- 343
Query: 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+H VAT D G+ R G CA P
Sbjct: 344 --------ADIHPHDVATAV-DTEGVAVRAGHHCAQP 371
>sp|Q9K7A0|CSD_BACHD Probable cysteine desulfurase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=csd PE=3 SV=2
Length = 406
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 164/400 (41%), Gaps = 52/400 (13%)
Query: 69 FDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASN 128
D L Y D A+ + + + + + + N H +G T A
Sbjct: 13 LDQEVNGSPLVYLDSAATSQKPIAVIEALDDYYRRYNSNVHRGVHTLGTLATDGYEGARE 72
Query: 129 YIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGP 188
I+R + + IIF GTT AI + S R L DE + + P
Sbjct: 73 KIRRFIHASSTEEIIFT-RGTTTAIN-------LVAASYGRANL--GEGDE----IVITP 118
Query: 189 YEHHSNLLSWRQ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244
EHHSN++ W+Q + A + + L +G + IE + + +++ + + SN
Sbjct: 119 MEHHSNIIPWQQVAKATGATLTYLPLQKDGTIKIEDVEKTI-----SEKTKIVAIMHVSN 173
Query: 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG 304
V G + + IA + H++G D A S P++KI+++ G D + HK + GP
Sbjct: 174 VLGTINPVKEIAEIAHRHGAIMLVDGAQSAPHMKIDVQEL---GCDFFAFSGHK-MAGPT 229
Query: 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR 364
G+L KA L P GG +++V +D +++ + GGTP I I
Sbjct: 230 GIGVLYGKKA--HLEKMEPVEFGGEMIDFVGLYDST----WKELPWKFEGGTPIIAGAIG 283
Query: 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN 424
A E IG + I+K E + AL R+ + + V G KR +++F +
Sbjct: 284 LGAAIDFLEDIGLDEIEKHEHELAQYALDRLSELEGMTVYGPQ--KRAGLVTFNI----- 336
Query: 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+ +H VAT+ D GI R G CA P
Sbjct: 337 -----------EDVHPHDVATVL-DADGIAVRAGHHCAQP 364
>sp|O51111|CSD_BORBU Probable cysteine desulfurase OS=Borrelia burgdorferi (strain ATCC
35210 / B31 / CIP 102532 / DSM 4680) GN=csd PE=3 SV=1
Length = 422
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 193/480 (40%), Gaps = 87/480 (18%)
Query: 49 KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGR--------SLRYIEDYIINN 100
K + EK+ +LR + +FD + + Y D+ A+ + ++ Y E+Y
Sbjct: 7 KSNVEKVKFLRKDFPILNKKFD----NKYIIYFDNAATSQKPKNVIYSNVEYYENY---- 58
Query: 101 VLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVM 160
N H S + + + + +K + A IIF +GTT I +
Sbjct: 59 ----NANVHRSGHKFAIQSSIKIEKTRELVKNFINAESAKNIIFT-SGTTDGINTI---- 109
Query: 161 GITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL-----DDNGL 215
S K +DE + L EH+SNLL W +LA + + + ++ G+
Sbjct: 110 ---ASSFFYSKYFKK-KDE----IILTTLEHNSNLLPW-VNLANLANLKIKLAKFNEMGI 160
Query: 216 LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275
+ E + + ++ L S S +N G +D SI ++ +Y D A P
Sbjct: 161 ITPEEIEKLI-----TEKTKLISISGINNTLGTINDLESIGKIAKKYNICLFVDAAQMAP 215
Query: 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVN 335
++KI+++ G D + + HK L G GIL IS + + S S GG TV +
Sbjct: 216 HIKIDVKKI---GCDFLVFSGHKMLAPTGI-GILYISNNMAEKLHS--SKLGGNTVEEIF 269
Query: 336 AFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRI 395
+EK D + GTP I +I A + I + I + + IE + ++
Sbjct: 270 IENEKIKFKASDSPNKFESGTPNIAGIIGLEEAIKYIDNISMDFILEHDKQLIEYGVKKL 329
Query: 396 LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQA 455
++ + NT++KR +I+SF V K +H + T D GI
Sbjct: 330 QELDEVEFILNTNLKRNSIISFTV----------------KNIHSHDIETYL-DTMGIAT 372
Query: 456 RGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE-FILA 514
R G C+ +AF + K +L RI+F +Y + EE + FIL
Sbjct: 373 RAGRTCS------YVAF-------FPENLNKDHL------LRISFYFYNTQEEIDNFILG 413
>sp|O32164|CSD_BACSU Probable cysteine desulfurase OS=Bacillus subtilis (strain 168)
GN=csd PE=3 SV=1
Length = 406
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 170/416 (40%), Gaps = 63/416 (15%)
Query: 53 EKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSD 112
E+ L Q+ G+D L Y D A+ + R + + + + N H
Sbjct: 8 EQFPILHQQVNGHD-----------LVYLDSAATSQKPRAVIETLDKYYNQYNSNVHRGV 56
Query: 113 SYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKL 172
+G R T A +++ + IIF TT+ + + S R L
Sbjct: 57 HTLGTRATDGYEGAREKVRKFINAKSMAEIIFTKGTTTS--------LNMVALSYARANL 108
Query: 173 ITSLRDEERWVVFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELY 228
DE V + EHH+N++ W+Q++ A + I L ++G + +E +R +
Sbjct: 109 KPG--DE----VVITYMEHHANIIPWQQAVKATGATLKYIPLQEDGTISLEDVRETV--- 159
Query: 229 KAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDG 288
+ + S SNV G + + +A++ H G D A S P++KI+++ + D
Sbjct: 160 --TSNTKIVAVSHVSNVLGTVNPIKEMAKIAHDNGAVIVVDGAQSTPHMKIDVQDLDCDF 217
Query: 289 YDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDI 348
+ L++HK + GP G+L KAL L + P+ GG +++V ++ +++
Sbjct: 218 F---ALSSHK-MCGPTGVGVLYGKKAL--LENMEPAEFGGEMIDFVGLYEST----WKEL 267
Query: 349 EERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTS 408
+ GTP I I A E IG + I + E AL R + V G
Sbjct: 268 PWKFEAGTPIIAGAIGLGAAIDFLEEIGLDEISRHEHKLAAYALERFRQLDGVTVYGPE- 326
Query: 409 VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
+R +++F N+ +H VAT+ D GI R G CA P
Sbjct: 327 -ERAGLVTF-----------NL-----DDVHPHDVATVL-DAEGIAVRAGHHCAQP 364
>sp|Q9HMM6|CSD_HALSA Probable cysteine desulfurase OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=csd PE=3 SV=1
Length = 415
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 175/448 (39%), Gaps = 71/448 (15%)
Query: 74 GKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRC 133
G L Y D+ A+ + + D I + + N H + Q + +A + +
Sbjct: 27 GGEDLVYLDNAATSHTPEPVVDAIADYYRRYNSNVHRGLHELSQEASVAYEDAHDKLAAF 86
Query: 134 LGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHS 193
+GG + ++F TT A + G+ + ++T + EHH+
Sbjct: 87 VGGEDREEMVFT-KNTTEAENLVAFAWGLNELGPGDEVVLTQM-------------EHHA 132
Query: 194 NLLSWRQ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY 249
+L++W+Q + AEV I + D+G LD++A + L + SN G
Sbjct: 133 SLVTWQQVADETGAEVKYIPITDDGHLDMDAAADMI-----TDDTALVNAVHISNTLGTV 187
Query: 250 SDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGIL 309
+ +A + H +G + D A + P ++++ + D Y + HK LG G G L
Sbjct: 188 NPVGELADIAHDHGAYIFVDGAQAAPTRAVDVQEIDADFY---AFSGHKMLGPTGI-GCL 243
Query: 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAF 369
+ L L P GG + V+ D D + GTP I Q I A A
Sbjct: 244 YGKRHL--LAEMEPFLYGGDMIERVSYEDAT----WNDPPWKFEAGTPVIAQGIALAEAV 297
Query: 370 WVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPEN 429
+ IG + I+ E+ E A ++ ++ V G R A++SF V
Sbjct: 298 DYLQDIGMDAIRAHEEALTEYAYDQLTMTDDVDVYGPPGDDRGAVVSFNV---------- 347
Query: 430 MKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYL 489
+H ++++ ND +G+ R G C P T L
Sbjct: 348 ------DGIHAHDLSSILND-YGVAIRAGDHCTQPLHDT--------------------L 380
Query: 490 GVKPGWTRITFPYYMSNEEFEFILAALE 517
GV P R +F Y + +E + ++AA++
Sbjct: 381 GV-PASARASFYLYNTRDEVDALVAAVD 407
>sp|Q9V242|CSD_PYRAB Probable cysteine desulfurase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=csd PE=3 SV=1
Length = 401
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 185/463 (39%), Gaps = 82/463 (17%)
Query: 63 IGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKM 122
I DV D + + Y D+TA+ + + + + + L + N H + Q T+
Sbjct: 3 IPEDVRKDIPL-TQEVIYFDNTATSLTPKPVIEAMDEYYLRYRANVHRGVHRLSQMATQK 61
Query: 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERW 182
E+ + + + D I F T+ ++ + +G+ DK++T+
Sbjct: 62 YEESRKVVADFINA-EFDEIAFT-KNTSESLNLV--ALGLEHLFKKGDKIVTT------- 110
Query: 183 VVFLGPYEHHSNLLSWRQSLAEVVEIGL-----DDNGLLDIEALRSQLELYKAAKRPMLG 237
PYEHHSNLL W Q LA+ + L DD G LD+ ++ K AK L
Sbjct: 111 -----PYEHHSNLLPW-QRLAKKKGLKLEFIEGDDEGNLDLADAEKKI---KGAK---LV 158
Query: 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLA-- 295
+ SN G+ + + +++ + G D A S +++++++ D FLA
Sbjct: 159 AVQHVSNALGVIHEVEELGKMVKEEGAIFVVDAAQSVGHMEVDVKKLKAD-----FLAFS 213
Query: 296 THKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355
HK GP G+L I+K + + P GGGT+ V E L + ER G
Sbjct: 214 GHKGPMGPTGIGVLYINKEFFDVFE--PPLIGGGTIEDV----ELCCYKLTEPPERFEAG 267
Query: 356 TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQA-I 414
TP I I A E IG + I+KQE ++ L I G ++ + A +
Sbjct: 268 TPNIGGAIGLAAGIKYIEKIGIDKIEKQERKLVKRTT-EGLDELEIPWYGPRNLDKHAGV 326
Query: 415 LSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474
+SF V PLH VA++ ++ I R G CA P
Sbjct: 327 VSFNV----------------PPLHPHDVASVLDE-HKIMVRSGHHCALPV--------- 360
Query: 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517
+ L+I G R +F Y S EE E L LE
Sbjct: 361 MKRLKIN------------GTVRASFHVYNSLEEVETFLGVLE 391
>sp|Q9Z7L5|CSD_CHLPN Probable cysteine desulfurase OS=Chlamydia pneumoniae GN=csd PE=3
SV=1
Length = 406
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 163/400 (40%), Gaps = 55/400 (13%)
Query: 80 YADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139
Y D A+ + + + D + N Y + + + +T+ +++ +
Sbjct: 23 YLDSAATTQKPQQVIDAVANFYTSSYATVNRAIYSSSRNVTEAYAAVREKVRKWVSAASD 82
Query: 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW- 198
I+F GTTA + ++ I+V + K VV + EHH+N+LSW
Sbjct: 83 SEIVFT-RGTTAGLN----LLAISVNDLWIPK---------GGVVLVSEAEHHANVLSWE 128
Query: 199 ---RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSI 255
R+ + V +I + D+GL+D++ L L + S SNVTG + +
Sbjct: 129 IACRRRGSLVKKIRVHDSGLIDLDDLEKLLN-----EGAQFVSIPHVSNVTGCVQPLQQV 183
Query: 256 ARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315
A L+H+Y + D A P++ I+++ ++D Y ++HK G G G+L K L
Sbjct: 184 AELVHRYDAYLAVDGAQGAPHLPIDVQLWDVDFY---VFSSHKIYGPTGI-GVLYGKKDL 239
Query: 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYI 375
L PP GG + V +D ++ YL + E GTP I ++ A + +
Sbjct: 240 --LDQLPPVEGGG---DMVAIYDHQNPEYLPAPMKFE-AGTPNIAGVLGLGAALDYLDGL 293
Query: 376 GYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435
+ I +E +L +++LG + + + L M I+
Sbjct: 294 SAKFIYDKEIALTTYLHKELLEIPGVEILGPSIEEPRGALI------------GMTIDGA 341
Query: 436 KPLHGPFVATLFNDLFGIQARGGCACAGP------YGHTL 469
PL F+ DL GI R G CA P GH L
Sbjct: 342 HPLDLGFLL----DLRGIAVRTGHQCAQPAMERWNVGHVL 377
>sp|Q9XAD5|CSD_STRCO Probable cysteine desulfurase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=csd PE=3 SV=1
Length = 418
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 172/448 (38%), Gaps = 68/448 (15%)
Query: 77 RLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG 136
+L Y D+ A+ + R + D + + N H + + T + A + + +
Sbjct: 29 KLVYLDNAATSQKPRQVLDALSEYYERYNANVHRGVHVLAEEATALYEGARDKVAEFINA 88
Query: 137 GQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196
D +IF T A + L V M R + + + EHHSN++
Sbjct: 89 PSRDEVIF----TKNASESLNLVAN------MLGWADDPYRVDHETEIVITEMEHHSNIV 138
Query: 197 SWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT 252
W+ ++ A++ GL D+G LD+ + + ++ + SF SN+ G +
Sbjct: 139 PWQLLAQRTGAKLRWFGLTDDGRLDLSNIDEVI-----TEKTKVVSFVLVSNILGTQNPV 193
Query: 253 RSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLIS 312
+I R + G C D + + P++ +++++ D + HK G G G+L
Sbjct: 194 EAIVRRAQEVGALVCIDASQAAPHMPLDVQALQA---DFVAFTGHKMCGPTGI-GVLWGR 249
Query: 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVK 372
+ L L PP GG + V+ E GTP + Q + A
Sbjct: 250 QEL--LEDLPPFLGGGEMIETVSMHSSTYAPAPHKFE----AGTPPVAQAVGLGAAIDYL 303
Query: 373 EYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSV-KRQAILSFLVYSTTNSSPENMK 431
IG + I E E A+ R+L +++++G T+ +R A +SF +
Sbjct: 304 NSIGMDKILAHEHALTEYAVKRLLEVPDLRIIGPTTAEERGAAISFTLGD---------- 353
Query: 432 IERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGV 491
+H V + ++ GI R G CA R + +R I
Sbjct: 354 ------IHPHDVGQVLDEQ-GIAVRVGHHCA-------------RPVCLRYGI------- 386
Query: 492 KPGWTRITFPYYMSNEEFEFILAALEFI 519
P TR +F Y + E + ++ LE +
Sbjct: 387 -PATTRASFYLYSTPAEIDALVDGLEHV 413
>sp|O27442|CSD_METTH Probable cysteine desulfurase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=csd PE=3 SV=1
Length = 400
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 127/337 (37%), Gaps = 52/337 (15%)
Query: 190 EHHSNLLSW---RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT 246
EHHSN L W R+ +V + D+ G++D + ++ + L + + SN
Sbjct: 113 EHHSNFLPWLRLRERGVDVRVVKADEGGVVDPGRIEDAVD-----ETTRLVTVTHISNAL 167
Query: 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTP 306
G D + I R+ H G D A S ++++++R+ G D HK GP
Sbjct: 168 GTVQDVKEIGRIAHDVGALYLVDAAQSIGHMEVDVRAI---GADFAAFPGHKGTLGPVGT 224
Query: 307 GILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAA 366
G L S + G P GGGTV V+ +D LED + GT I I
Sbjct: 225 GFLYCSTDVQ--GELEPLMLGGGTVLDVS----EDGYVLEDFPAKFEAGTLNIAGFIGLG 278
Query: 367 LAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSS 426
+ IG I+K E + I+ G+ Q I L ++ N
Sbjct: 279 ASIDYMNRIGIRRIQKHGMKMTEELHATVSSIDGIECYGDP----QNIYGILSFNINNMD 334
Query: 427 PENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQK 486
P + VA + ++ GI R G CA P A++
Sbjct: 335 PHD-------------VAKILDETAGICVRSGHHCAIP------------------AMKH 363
Query: 487 GYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523
L G R + YY ++EE + + LE IA G
Sbjct: 364 LALHETGGTVRASIHYYNTSEEIQLLGETLEEIAGMG 400
>sp|P63516|CSD_MYCTU Probable cysteine desulfurase OS=Mycobacterium tuberculosis GN=csd
PE=3 SV=1
Length = 417
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 63/369 (17%)
Query: 111 SDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI--KRLQEVMGITVPSIM 168
S+ V + +++ EA++ ++ G+AD +F GA T + K E +
Sbjct: 56 SNGAVHRGAHQLMEEATDAYEQ----GRADIALFVGADTDELVFTKNATEAL-------- 103
Query: 169 RDKLITSLRDEERWVVFLGP--------YEHHSNLLSW----RQSLAEVVEIGLDDNGLL 216
L++ + + R+ +GP EHH+NL+ W R++ A + G+ D+G +
Sbjct: 104 --NLVSYVLGDSRFERAVGPGDVIVTTELEHHANLIPWQELARRTGATLRWYGVTDDGRI 161
Query: 217 DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276
D+++L R + +F+ SNVTG+ + + HQ G D S P+
Sbjct: 162 DLDSLYLD-------DRVKVVAFTHHSNVTGVLTPVSELVSRAHQSGALTVLDACQSVPH 214
Query: 277 VKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNA 336
++L G D + HK L GP G+L + L L PP GG + V
Sbjct: 215 QPVDLHEL---GVDFAAFSGHKML-GPNGIGVLYGRREL--LAQMPPFLTGGSMIETVT- 267
Query: 337 FDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396
+ +R GTP Q++ A A IG ++ E + +A+ +
Sbjct: 268 ---MEGATYAPAPQRFEAGTPMTSQVVGLAAAARYLGAIGMAAVEAHERELVAAAIEGLS 324
Query: 397 PNQNIQVLGNTSVK-RQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQA 455
+++LG TS++ R + ++F+V + +H V + +D G+
Sbjct: 325 GIDGVRILGPTSMRDRGSPVAFVV----------------EGVHAHDVGQVLDD-GGVAV 367
Query: 456 RGGCACAGP 464
R G CA P
Sbjct: 368 RVGHHCALP 376
>sp|P63517|CSD_MYCBO Probable cysteine desulfurase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=csd PE=3 SV=1
Length = 417
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 63/369 (17%)
Query: 111 SDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI--KRLQEVMGITVPSIM 168
S+ V + +++ EA++ ++ G+AD +F GA T + K E +
Sbjct: 56 SNGAVHRGAHQLMEEATDAYEQ----GRADIALFVGADTDELVFTKNATEAL-------- 103
Query: 169 RDKLITSLRDEERWVVFLGP--------YEHHSNLLSW----RQSLAEVVEIGLDDNGLL 216
L++ + + R+ +GP EHH+NL+ W R++ A + G+ D+G +
Sbjct: 104 --NLVSYVLGDSRFERAVGPGDVIVTTELEHHANLIPWQELARRTGATLRWYGVTDDGRI 161
Query: 217 DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276
D+++L R + +F+ SNVTG+ + + HQ G D S P+
Sbjct: 162 DLDSLYLD-------DRVKVVAFTHHSNVTGVLTPVSELVSRAHQSGALTVLDACQSVPH 214
Query: 277 VKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNA 336
++L G D + HK L GP G+L + L L PP GG + V
Sbjct: 215 QPVDLHEL---GVDFAAFSGHKML-GPNGIGVLYGRREL--LAQMPPFLTGGSMIETVT- 267
Query: 337 FDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396
+ +R GTP Q++ A A IG ++ E + +A+ +
Sbjct: 268 ---MEGATYAPAPQRFEAGTPMTSQVVGLAAAARYLGAIGMAAVEAHERELVAAAIEGLS 324
Query: 397 PNQNIQVLGNTSVK-RQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQA 455
+++LG TS++ R + ++F+V + +H V + +D G+
Sbjct: 325 GIDGVRILGPTSMRDRGSPVAFVV----------------EGVHAHDVGQVLDD-GGVAV 367
Query: 456 RGGCACAGP 464
R G CA P
Sbjct: 368 RVGHHCALP 376
>sp|Q9EXP2|SUFS_DICD3 Cysteine desulfurase OS=Dickeya dadantii (strain 3937) GN=sufS PE=1
SV=1
Length = 412
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 173/463 (37%), Gaps = 82/463 (17%)
Query: 72 SFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIK 131
S + L Y D AS + + D + L Y H + R T + E +
Sbjct: 23 SVNGQPLAYLDSAASAQKPLAVIDRERDFYLHEYAAVHRGIHTLSARATSAMEEVRAKVA 82
Query: 132 RCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV--PSIMRDKLITSLRDEERWVVFLGPY 189
+ A+ I+F GTT AI + G T P D L+ S
Sbjct: 83 TFIHAASAEDIVFV-RGTTEAINLVANSYGRTAFQPG---DNLVIS------------EM 126
Query: 190 EHHSNLLSWRQSLAEVVEIGL-----DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244
EHH+N++ W Q LA+ + L D+G LD+ L + L+ +R L + + SN
Sbjct: 127 EHHANIVPW-QMLAQARGLTLRVLPITDDGELDMAQLPALLD-----ERTRLVAVTQVSN 180
Query: 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG 304
V G + I R H G D A + + +++++ + D Y + HK L GP
Sbjct: 181 VLGTVNPLAEIIRQAHACGAKVLVDGAQAVMHQAVDVQALDCDFYA---FSGHK-LYGPS 236
Query: 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR 364
G+L L Q + PP GG + V+ + T Y D R G+P + +I
Sbjct: 237 GIGVLYGKSELLQ--AMPPWEGGGAMIREVSL--TQGTTY-ADPPWRFEAGSPHVAGIIG 291
Query: 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN 424
A +G + I+ E + + AL + +++ G V RQ +++F
Sbjct: 292 LGAALDYVSALGVDAIQAHEGLLMRYALASLAEVPTLRLYG--PVHRQGVIAF------- 342
Query: 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAI 484
N H F F D +GI R G CA P L R +
Sbjct: 343 ----------NLGRHHAFDVGSFLDQYGIAIRTGHHCAMP-------------LMSRYGV 379
Query: 485 QKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y +E + ++A L I HR L
Sbjct: 380 --------PSMCRASLALYSCQDEIDRLVAGLHRI----HRLL 410
>sp|Q49690|CSD2_MYCLE Probable cysteine desulfurase 2 OS=Mycobacterium leprae (strain TN)
GN=csd2 PE=3 SV=1
Length = 418
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 31/318 (9%)
Query: 110 TSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI--KRLQEVMGITVPSI 167
TS+ V + +++ EA++ +R G+ D F GA + K E + + V +
Sbjct: 55 TSNGAVHRGAHQLMEEATDAYER----GRVDIAAFIGAAADELVFTKNATESLNL-VSYV 109
Query: 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEI-----GLDDNGLLDIEALR 222
D + V+ EHH+NL+ W Q LA + G+ D+G +D+++L
Sbjct: 110 FGDNRFEGTSGDGGDVIVTTELEHHANLIPW-QELARRIGATLRWYGVTDDGQIDLDSL- 167
Query: 223 SQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLR 282
QL+ +R + +FS SNVTG + R + + G D S P+ ++L
Sbjct: 168 -QLD-----ERVKVVAFSHHSNVTGAVAPVRELVARAKEVGALTVLDACQSVPHQPVDLH 221
Query: 283 SRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDT 342
G D + HK L GP G+L + L L PP GG + V + T
Sbjct: 222 GL---GVDFAAFSGHKML-GPNGIGVLYARREL--LSVMPPFLTGGSMIETVTM---EST 272
Query: 343 LYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ 402
Y +R GTP Q++ A A + IG + ++ E + +A+ + ++
Sbjct: 273 TY-APAPQRFEAGTPMTSQVVGLAAAARYLDAIGMKAVEAHERELVAAAVEGLSRIDGVR 331
Query: 403 VLGNTSVK-RQAILSFLV 419
++G S++ R + +SF+V
Sbjct: 332 IIGPKSMENRGSPVSFVV 349
>sp|O32975|CSD1_MYCLE Probable cysteine desulfurase 1 OS=Mycobacterium leprae (strain TN)
GN=csd1 PE=3 SV=1
Length = 611
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 175/471 (37%), Gaps = 84/471 (17%)
Query: 69 FDYSFGKRRLTYADHTASGRSLRYIED--------YIINNVLPFYG----NTHTSDSYVG 116
FD + T +G+ L + ++ +I+ + FY N H + +
Sbjct: 205 FDIQAVRADFPILQETVNGKPLIWFDNAATTQKPQVVIDRLSYFYAHENSNIHRAAHELA 264
Query: 117 QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSL 176
R T EA +R +G +A IIF GTT AI + G + +IT L
Sbjct: 265 ARATDAYEEARETARRFIGAAKAQEIIFV-RGTTEAINLVAYAWGGKHLQPGDEVVITHL 323
Query: 177 RDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAK 232
EHH+N++ W+ Q+ A + +DD G L + L
Sbjct: 324 -------------EHHANIVPWQLLSSQTGAILKVAPVDDAGNLLMSEFEDLL-----GP 365
Query: 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAI 292
R L + + SN G + I L H+YG D A S P++ IN+ G D
Sbjct: 366 RTKLVAATQVSNALGTVTQGEKIVELGHRYGARVLIDGAQSIPHLPINVSEL---GADFF 422
Query: 293 FLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352
+ HK G G G+L + + L PP GG N + + +LY + +
Sbjct: 423 VFSGHKIYGPTGI-GVLYGCEDV--LTEMPPWQGGG---NMIVDVTLERSLY-QGPPNKF 475
Query: 353 NGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQ 412
GT I + A E +G + I E ++ A R+ ++++G T+ ++
Sbjct: 476 EAGTGNIADAVGLGEALRYVERVGVQRIASHEQALLDYATPRLADIPGVRLVG-TATEKA 534
Query: 413 AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472
++LSF++ H P + GI R G CA P
Sbjct: 535 SVLSFVLAG-----------------HEPLEVGKALNAEGIAVRAGHHCAQPV------- 570
Query: 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523
R L + + + R +F +Y + EE + + + IA G
Sbjct: 571 --LRRLGLEATV------------RPSFAFYNTYEEIDVFINVVRRIAEGG 607
>sp|Q9KII6|CSD_MYCPA Probable cysteine desulfurase OS=Mycobacterium paratuberculosis
(strain ATCC BAA-968 / K-10) GN=MAP_2120c PE=3 SV=1
Length = 685
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 176/471 (37%), Gaps = 84/471 (17%)
Query: 69 FDYSFGKRRLTYADHTASGRSLRYIED--------YIINNVLPFYG----NTHTSDSYVG 116
FD + + T +G+ L + ++ +I+ + FY N H + +
Sbjct: 279 FDVAAIRSDFPILKETVNGKPLIWFDNAATTQKPQVVIDRLSHFYAHENSNIHRAAHELA 338
Query: 117 QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSL 176
R T EA + + +G +D I+F GTT AI + G + +IT L
Sbjct: 339 ARATDAYEEARDTVAEFIGAPSSDNIVFV-RGTTEAINLVAHAWGAKHLQPGDEIVITHL 397
Query: 177 RDEERWVVFLGPYEHHSNLLSWR---QSLAEVVEIG-LDDNGLLDIEALRSQLELYKAAK 232
EHH+N++ W+ Q ++++ +DD G L + L
Sbjct: 398 -------------EHHANIVPWQLISQKTGAILKVAPIDDAGNLLLSEFEGLL-----GP 439
Query: 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAI 292
R L + S SN G I L H+YG D A S ++ I++ G D
Sbjct: 440 RTKLVAASHVSNALGTVMPVDKIVELGHRYGARVLIDGAQSIQHIPIDVAEL---GADFF 496
Query: 293 FLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352
+ HK G G + +AL + +PP GG + V + +LY + +
Sbjct: 497 VFSGHKIYGPTGIGALYGTEEALTE---TPPWQGGGHMIADVTL---ERSLY-QGPPTKF 549
Query: 353 NGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQ 412
GT I + A + +G E I E +E A R+ ++++G T+ ++
Sbjct: 550 EAGTGNIADAVGLTEALRYVQRLGVERIAAYEHALLEYATPRLADIPGVRLIG-TAQEKA 608
Query: 413 AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472
++LSF++ H P + GI R G CA P
Sbjct: 609 SVLSFVLAG-----------------HEPLEVGKALNAEGIAVRAGHHCAQP-------- 643
Query: 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523
R L + + + R +F +Y + EE + L A+ IA G
Sbjct: 644 -ALRRLGLEATV------------RPSFAFYNTFEEIDVFLRAVRRIAEGG 681
>sp|Q9YAB6|CSD_AERPE Probable cysteine desulfurase OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=csd
PE=3 SV=1
Length = 411
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 156/406 (38%), Gaps = 53/406 (13%)
Query: 66 DVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHE 125
+V ++ +R + Y D+ AS R + + + Y N H + +K +
Sbjct: 8 EVRSEFPELERGIVYLDNAASTLKPRRVVEAMREFSYRSYANVHRGVHRLSMEASKAYED 67
Query: 126 ASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVF 185
A + R +GG D ++F + E M + ++ + L LR E V
Sbjct: 68 AHEVVARLVGGSW-DEVVFT--------RNTTEAMQLAALTLAYNGL---LRGGE---VL 112
Query: 186 LGPYEHHSNLLSW----RQSLAEVVEIGLDDNGLLDIEALRSQL-ELYKAAKRPMLGSFS 240
+ +HHS LL W R + LD G+ + L + E +A +
Sbjct: 113 VTAADHHSTLLPWVRAARLGGGRARILPLDGRGVPRWDLLEDYITEDTRAV------AVG 166
Query: 241 ACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL 300
SNVTG+ + I + + G D A P++ ++ R G D + HK L
Sbjct: 167 HVSNVTGVVAPVEDIVKAAKKVGALVVLDSAQGVPHLPVDFRRM---GVDMAAFSGHKML 223
Query: 301 GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360
G G G+L + L + P GGGTV+ V + E+ + GTP I+
Sbjct: 224 GPTGI-GVLWARRDLLE--ELEPPLGGGGTVSRVRLQGGSVEIEWEEPPWKFEAGTPPII 280
Query: 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN---IQVLG-NTSVKRQAILS 416
+ + A A + IG E + + ED + + P + I+ +G + +R I+S
Sbjct: 281 EAVGLAEAANMLMEIGMEHVARHEDELTSHTMKLLEPLYSEGLIRYVGPDKPGERHGIVS 340
Query: 417 FLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA 462
+T SP+ + L D GI R G CA
Sbjct: 341 I---TTHLKSPDELG--------------LLLDRRGIAVRTGLHCA 369
>sp|Q9KPQ7|CSD_VIBCH Probable cysteine desulfurase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=csd PE=3
SV=1
Length = 404
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 170/443 (38%), Gaps = 73/443 (16%)
Query: 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137
L Y D A+ + + + D I + N H + + T A + + +G
Sbjct: 24 LVYLDSAATTQKPQCVIDAISHYYSQHNANVHRGSHSLTAQATSQFEGAREQVAQFIGAP 83
Query: 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197
+ II+ T E + + S R L DE + + EHH+N++
Sbjct: 84 SSKNIIWTRGAT--------EALNLIAQSYARSTLQAG--DE----ILVSETEHHANIVP 129
Query: 198 WR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTR 253
W+ Q+ A+VV+I + G + A R L + R + + + +NVTG
Sbjct: 130 WQMVAEQTGAKVVKIPMTTTGEFGLAAFRQLL-----SPRCKIVALAHITNVTGTRQPIE 184
Query: 254 SIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK 313
++ + HQ G D A + +++R+ + D Y + HK L P G+L
Sbjct: 185 AVIQAAHQQGAIVVIDGAQGIVHETVDVRALDADFY---VFSGHK-LYAPAGIGVLYGKT 240
Query: 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE 373
AL L + PP GG V V+ FD + + GTP + I A A +
Sbjct: 241 AL--LEAMPPWHGGGKMVEKVS-FDGTT---FTGLPGKFEAGTPNVAGAIALATAIDWYQ 294
Query: 374 YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE 433
+ ++ + A I +I+VLG ++LS ++
Sbjct: 295 SLDRAAVEAHLHQLQQQAYQAISQIDDIRVLGYQ--PNASVLSLVM-------------- 338
Query: 434 RNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKP 493
+H +ATL D GI R G CA P + AF GVK
Sbjct: 339 --DGVHHQDLATLL-DQQGIAVRAGHHCAHPL---MDAF-----------------GVK- 374
Query: 494 GWTRITFPYYMSNEEFEFILAAL 516
G RI+F Y S EE E ++AA+
Sbjct: 375 GTVRISFGVYNSAEEVERLIAAI 397
>sp|Q7N3U5|SUFS_PHOLL Cysteine desulfurase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=sufS PE=3 SV=1
Length = 412
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 161/400 (40%), Gaps = 63/400 (15%)
Query: 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137
L Y D AS + + + L Y H + T+MV I + +
Sbjct: 24 LVYLDSAASAQKPVSVIERESEFCLHQYAAVHRGIHTLSSAATRMVENVRYQIAQFIHAQ 83
Query: 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197
+ I+F GTT I + G + + +IT + EHH+N++
Sbjct: 84 SHEEIVFV-KGTTEGINLIANSYGRKFINNGDNIVITEM-------------EHHANIVP 129
Query: 198 WRQSLAEVVEIG-------LDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS 250
W LAE +IG L++NG LD L S ++ R L SF+ SNV G +
Sbjct: 130 WYM-LAE--QIGFEIRVWPLNENGELDQAILASLID-----SRTKLLSFTHLSNVLGTVN 181
Query: 251 DTRSI---ARLL--HQYGGFACF-DFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG 304
R I AR L Q G D A + + +I+++ + D Y ++HK L GP
Sbjct: 182 PVRQIIKQARKLADEQEGRLHILVDGAQAIMHKQIDVQDLDCDFY---VFSSHK-LYGPT 237
Query: 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR 364
G+L K+L L + PP GG + V+ +K Y E R GTP I +I
Sbjct: 238 GIGVLYGRKSL--LDAMPPWEGGGAMIKQVSL--QKGITYAEP-PWRFEAGTPNITGIIG 292
Query: 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN 424
A +G + I++ E ++ A+ R+ + +++ G +RQ +++F
Sbjct: 293 LGAAVDYVTSLGLDEIQQHEQALMDYAMARLKEVKTLKLYGPE--QRQGVIAF------- 343
Query: 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
N H + F D +GI R G CA P
Sbjct: 344 ----------NLGRHHAYDVGSFLDQYGIAIRTGHHCALP 373
>sp|Q9PDA6|CSD_XYLFA Probable cysteine desulfurase OS=Xylella fastidiosa (strain 9a5c)
GN=csd PE=3 SV=1
Length = 416
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 143/340 (42%), Gaps = 62/340 (18%)
Query: 183 VVFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGS 238
V+ + EHH+N++ W+ ++ A + + NG LD++AL + + + L +
Sbjct: 125 VILVSRMEHHANIVPWQLIAERTGARIQVADILPNGTLDLDALHTLM-----TPQVKLLA 179
Query: 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHK 298
+ SNV G + I R Q G D + + P+ I++ + D Y + HK
Sbjct: 180 ITHVSNVLGTVNPIHDICRQARQRGITTVVDGSQAAPHRHIDIPAIGCDFYA---ITGHK 236
Query: 299 FLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358
G GT + + L+ + PP GG + V+ FD TL+ + E GTP
Sbjct: 237 LYGPTGTGALWARREHLHIM---PPFLGGGEMIKEVS-FD--GTLFNTPPHKFE-AGTPN 289
Query: 359 IVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILS 416
I I RAA+ + + IG E I+ +E + + +++ G T+ + A++S
Sbjct: 290 IAGFIGLRAAVDYVRR--IGIEQIETRETELLAHLTEELQKIDGMRLFG-TAPNKAAVVS 346
Query: 417 FLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476
F++ T H +ATL DL G+ R G CA H LL
Sbjct: 347 FMIEGT----------------HAHDLATLL-DLEGVAIRSGQHCA----HPLLQ----- 380
Query: 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516
Y GV R + +Y ++EE E +AAL
Sbjct: 381 -----------YYGVT-ATCRASLAFYNTHEEIERFIAAL 408
>sp|Q87DJ2|CSD_XYLFT Probable cysteine desulfurase OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=csd PE=3 SV=1
Length = 416
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 138/338 (40%), Gaps = 58/338 (17%)
Query: 183 VVFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGS 238
V+ + EHH+N++ W+ ++ A + + NG LD++AL + + + L +
Sbjct: 125 VILVSRMEHHANIVPWQLIAERTGARIQVADILPNGTLDLDALHTLM-----TPQVKLLA 179
Query: 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHK 298
+ SNV G + I R Q G D + + P+ IN+ + D Y + HK
Sbjct: 180 ITHVSNVLGTVNPIHDICRQARQRGITTVVDGSQAAPHRHINIPAIGCDFYA---ITGHK 236
Query: 299 FLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358
G GT + + L+ + PP GG + V +FD TL+ + E GTP
Sbjct: 237 LYGPTGTGALWARREHLHIM---PPFLGGGEMIKEV-SFD--GTLFNTPPHKFE-AGTPN 289
Query: 359 IVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFL 418
I I + A IG + I+ +E + + +++ G T+ + A++SF+
Sbjct: 290 IAGFIGLSAAVDYVRRIGIDQIETRETELLAHLTEELQKIDGMRLFG-TAPNKAAVVSFM 348
Query: 419 VYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSL 478
+ T H +ATL DL G+ R G CA H LL
Sbjct: 349 IEGT----------------HAHDLATLL-DLEGVAVRSGQHCA----HPLLQ------- 380
Query: 479 EIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516
Y GV R + +Y ++EE E + AL
Sbjct: 381 ---------YYGVT-ATCRASLAFYNTHEEIERFITAL 408
>sp|Q9PLP0|CSD_CHLMU Probable cysteine desulfurase OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=csd PE=3 SV=1
Length = 400
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 126/308 (40%), Gaps = 62/308 (20%)
Query: 184 VFLGPYEHHSNLLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
V + EHH+N+LSW R+S A V ++ ++D G++D+ L L+ + L S
Sbjct: 109 VVVSEAEHHANILSWEIACRRSGATVKKVRVNDEGIIDLSHLEKLLK-----QGVQLVSL 163
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFA---ASGPYVKINLRSRNIDGYDAIFLA- 295
+ SNV+G + +A L+H+YG D A SGP N+ G+D F A
Sbjct: 164 AHVSNVSGAVLPVQEVAFLVHRYGALLAIDGAQGVGSGPL--------NLSGWDVDFYAF 215
Query: 296 -THKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354
HK L P G+L + L L S PP GG + V +D + + Y E R
Sbjct: 216 SGHK-LYAPTGIGVLYGKREL--LESLPPVEGGG---DMVVVYDSESSRYQEP-PLRFEA 268
Query: 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-----NIQVLGNTSV 409
GTP I ++ A + + + V +AL R L N+ +IQ++G
Sbjct: 269 GTPHIAGVLGLGAAIDYLQALPFSVSDHL------TALTRFLYNRLLTIPDIQIVGPQQG 322
Query: 410 KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP----- 464
+ L ++ +S ++ GI R G C+ P
Sbjct: 323 TPRGCLCSIIIPGVQASDLGFLLDGK----------------GIAVRSGHQCSQPAMARW 366
Query: 465 -YGHTLLA 471
GH L A
Sbjct: 367 DLGHVLRA 374
>sp|Q7UAH4|SUFS_SHIFL Cysteine desulfurase OS=Shigella flexneri GN=sufS PE=3 SV=1
Length = 406
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNSIAEYEQNLMHYALSQLESVPDLTLYGQQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE E ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVERLVTGLQRI----HRLL 405
>sp|Q321D9|SUFS_SHIBS Cysteine desulfurase OS=Shigella boydii serotype 4 (strain Sb227)
GN=sufS PE=3 SV=1
Length = 406
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ N+ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|B2U2I4|SUFS_SHIB3 Cysteine desulfurase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=sufS PE=3 SV=1
Length = 406
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ N+ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|A4W9R3|SUFS_ENT38 Cysteine desulfurase OS=Enterobacter sp. (strain 638) GN=sufS PE=3
SV=1
Length = 406
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 168/446 (37%), Gaps = 72/446 (16%)
Query: 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137
L Y D AS + + D + Y H + T+ + + L
Sbjct: 24 LAYLDSAASAQKPNQVIDAEMEFYRHGYAAVHRGIHTLSAEATQRMENVRTQVAAFLNAR 83
Query: 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197
A+ ++F GTT I + G + +IT + EHH+N++
Sbjct: 84 SAEELVFV-RGTTEGINLVANSWGNAQVHAGDNIVITQM-------------EHHANIVP 129
Query: 198 WR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTR 253
W+ +S A++ I L+ +G L +E L + L+ R L + + SNV G +
Sbjct: 130 WQMLCERSGAQLRVIPLNVDGTLQLEQLDALLD-----ARTRLVAITQISNVLGTANPVA 184
Query: 254 SIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK 313
I HQ G D A + + I++++ + D Y + HK L GP G+L + +
Sbjct: 185 EIIAKAHQAGAKVLVDGAQAVMHHTIDVQALDCDFY---VFSGHK-LYGPTGIGVLYVKE 240
Query: 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE 373
+ Q + PP GG + V+ + T Y + R GTP +I A
Sbjct: 241 DILQ--AMPPWEGGGSMIATVSL--TQGTTYAK-APWRFEAGTPNTGGIIGLGAAIDYVS 295
Query: 374 YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE 433
+G + I + E + AL + ++ + G + R+ +++F
Sbjct: 296 TLGLDAIAEYEASLMRYALAEMASVPDLTLYGPDA--RKGVIAF---------------- 337
Query: 434 RNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKP 493
N H + F D +G+ R G CA P L+AF Q P
Sbjct: 338 -NLGKHHAYDVGSFLDNYGVAVRTGHHCAMP----LMAFYQV-----------------P 375
Query: 494 GWTRITFPYYMSNEEFEFILAALEFI 519
R + Y + EE + ++ L+ I
Sbjct: 376 AMCRASLVMYNTTEEVDRLVTGLKRI 401
>sp|Q3Z233|SUFS_SHISS Cysteine desulfurase OS=Shigella sonnei (strain Ss046) GN=sufS PE=3
SV=1
Length = 406
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + I L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEIITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|Q0THE9|SUFS_ECOL5 Cysteine desulfurase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=sufS PE=3 SV=1
Length = 406
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSVHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|Q57476|CSD_HAEIN Probable cysteine desulfurase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=csd PE=3 SV=1
Length = 437
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 150/335 (44%), Gaps = 52/335 (15%)
Query: 52 EEKLAWLRSQIIGNDVE-FDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFY---GN 107
+ KL WL II + F Y + + Y D+ A+ +L+ +I+ FY G+
Sbjct: 34 KRKLIWLL--IIKRSRQAFPYFQREDAVIYLDNAAT--TLK--PQVLIDRTAEFYASAGS 87
Query: 108 THTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSI 167
H S Q T +A +K + A+I+ +GTT AI ++
Sbjct: 88 VHRSQYDAAQ--TVQYEQARTQVKEWVHAEDKHAVIWT-SGTTHAI------------NL 132
Query: 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRS 223
+ + L+ L E+ + + +HH+N ++W ++ A++ + + DN L+D AL S
Sbjct: 133 VANGLMPQLNAEDE--ILISQADHHANFVTWHETAKKCGAKIQVLPILDNWLIDENALIS 190
Query: 224 QLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG-GFACFDFAASGPYVKINLR 282
L +++ L + + SNVTG + + +L+ ++ D A + ++KI+L+
Sbjct: 191 AL-----SEKTKLVALNFVSNVTGTEQPIKRLIQLIRKHSNALVLVDAAQAISHIKIDLQ 245
Query: 283 SRNIDGYDAIFLA--THKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEK 340
DA FLA HK + GP G+L + L L P GG V+ V+
Sbjct: 246 D-----LDADFLAFSAHK-IYGPNGLGVL--TGKLTALSQLQPLFFGGKMVDRVS----N 293
Query: 341 DTLYLEDIEERENGGTPQIVQMIR-AALAFWVKEY 374
D + ++ R GTP I +I A+ W++++
Sbjct: 294 DRITFAELPYRLEAGTPNIAGVIGFNAVLDWLQKW 328
>sp|B6IBB9|SUFS_ECOSE Cysteine desulfurase OS=Escherichia coli (strain SE11) GN=sufS PE=3
SV=1
Length = 406
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNSIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|A7ZME5|SUFS_ECO24 Cysteine desulfurase OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVHVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNSIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|Q1RBB6|SUFS_ECOUT Cysteine desulfurase OS=Escherichia coli (strain UTI89 / UPEC)
GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|Q8FH54|SUFS_ECOL6 Cysteine desulfurase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLAAVPDLTLYGPPD--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|A1ABL8|SUFS_ECOK1 Cysteine desulfurase OS=Escherichia coli O1:K1 / APEC GN=sufS PE=3
SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|B7MV59|SUFS_ECO81 Cysteine desulfurase OS=Escherichia coli O81 (strain ED1a) GN=sufS
PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|B7L5N2|SUFS_ECO55 Cysteine desulfurase OS=Escherichia coli (strain 55989 / EAEC)
GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|B7MA32|SUFS_ECO45 Cysteine desulfurase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|B7US19|SUFS_ECO27 Cysteine desulfurase OS=Escherichia coli O127:H6 (strain E2348/69 /
EPEC) GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLAAVPDLTLYGPPD--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|P77444|SUFS_ECOLI Cysteine desulfurase OS=Escherichia coli (strain K12) GN=sufS PE=1
SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|B1XFY8|SUFS_ECODH Cysteine desulfurase OS=Escherichia coli (strain K12 / DH10B)
GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|C4ZYE2|SUFS_ECOBW Cysteine desulfurase OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=sufS PE=3 SV=1
Length = 406
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|Q9X191|CSD_THEMA Probable cysteine desulfurase OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=csd PE=3 SV=1
Length = 413
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 163/399 (40%), Gaps = 62/399 (15%)
Query: 76 RRLTYADHTAS----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIK 131
+R+ Y D A+ + ++ +E++ N+ Y N H + + R T E
Sbjct: 20 KRIVYLDSAATTLKPKQVVKKLEEFYYNS----YANVHRAVHTLAVRATTEFEETREEFA 75
Query: 132 RCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEH 191
LG + IIF +GTT AI + V S++R ++ +E +V + EH
Sbjct: 76 EFLGAS-PEEIIFT-SGTTMAI-------NLAVVSLLRSGIL-----KEDDLVLVSLLEH 121
Query: 192 HSNLLSWRQSLAEVVEIGLD------DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245
H+N + W + L++ +D G L+++ L L K P + + + SNV
Sbjct: 122 HANFVPWLR-LSKFHGYRIDFIRPSGRFGTLEMDDL-----LKHRDKNPKVVAITGLSNV 175
Query: 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT 305
TG + + D A P+ + + + I G D + + HK LG G
Sbjct: 176 TGQRIPVEELRNVFPN--SIILLDGAQLIPHEPV--KPKEI-GVDFLAFSLHKMLGPTGV 230
Query: 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRA 365
G+L + + L P GG ++ V+ D + ++ + GTP I ++ +
Sbjct: 231 -GVLYGKREV--LEQMEPFLYGGEMIDRVSLED----VTFNELPYKFEAGTPNIADIVAS 283
Query: 366 ALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNS 425
A + G++ + ++ + + AL ++ +++ G ++ I+SF V
Sbjct: 284 REALRYLKETGFDSVHEKIEQLTQMALKEMMKIGGVEIYGPLDERQHGIVSFNV------ 337
Query: 426 SPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464
K +H VA + + FGI R G CA P
Sbjct: 338 ----------KGIHPHDVAHILDQEFGIAVRSGHHCAQP 366
>sp|B7LQ96|SUFS_ESCF3 Cysteine desulfurase OS=Escherichia fergusonii (strain ATCC 35469 /
DSM 13698 / CDC 0568-73) GN=sufS PE=3 SV=1
Length = 406
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 137/348 (39%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ AE+ I L+ +G L +E L + + ++ L +
Sbjct: 116 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----EKTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L HQ+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLVEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL + +AL Q PP GG + V + E T R GTP
Sbjct: 227 LYGPTGIGILYVKEALLQ--EMPPWEGGGSMIATV-SLSEGTT--WTKAPWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G I + E + AL ++ ++ + G + R +++F
Sbjct: 282 GGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN--RLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A+
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMAYYNV---- 374
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
P R + Y ++EE + ++ L+ I HR L
Sbjct: 375 -------------PAMCRASLAMYNTHEEVDRLVTGLQRI----HRLL 405
>sp|A9N142|SUFS_SALPB Cysteine desulfurase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=sufS PE=3 SV=1
Length = 406
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 141/348 (40%), Gaps = 62/348 (17%)
Query: 184 VFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239
+ + EHH+N++ W+ + AE+ I L +G L +E L + + R L +
Sbjct: 116 IIISEMEHHANIVPWQMLCERKGAELRVIPLHPDGTLRLETLAALFD-----DRTRLLAI 170
Query: 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKF 299
+ SNV G + + L Q+G D A + + +++++ + D Y + HK
Sbjct: 171 THVSNVLGTENPLPDMIALARQHGAKVLVDGAQAVMHHAVDVQALDCDFY---VFSGHK- 226
Query: 300 LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359
L GP GIL I +AL Q PP GG ++ V+ + T + + R GTP
Sbjct: 227 LYGPTGIGILYIKEALLQ--EMPPWEGGGSMISTVSL--TQGTTWAK-APWRFEAGTPNT 281
Query: 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419
+I A +G + I E + + AL ++ +I + G +R +++F
Sbjct: 282 GGIIGLGAAIDYVTSLGLDKIGDYEQMLMRYALEQLAQVPDITLYG--PAQRLGVIAF-- 337
Query: 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479
N H + F D +GI R G CA P L+A
Sbjct: 338 ---------------NLGKHHAYDVGSFLDNYGIAVRTGHHCAMP----LMA-------- 370
Query: 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFL 527
+ GV P R + Y ++EE + ++A L I HR L
Sbjct: 371 --------WYGV-PAMCRASLAMYNTHEEVDRLVAGLTRI----HRLL 405
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 239,830,006
Number of Sequences: 539616
Number of extensions: 10399431
Number of successful extensions: 26739
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 26605
Number of HSP's gapped (non-prelim): 343
length of query: 625
length of database: 191,569,459
effective HSP length: 124
effective length of query: 501
effective length of database: 124,657,075
effective search space: 62453194575
effective search space used: 62453194575
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)