Query 043646
Match_columns 625
No_of_seqs 422 out of 3241
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 06:57:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043646.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043646hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 4.3E-58 9.3E-63 487.4 41.9 394 55-521 5-404 (405)
2 PLN02724 Molybdenum cofactor s 100.0 7.9E-52 1.7E-56 478.0 41.3 450 53-555 19-553 (805)
3 COG1104 NifS Cysteine sulfinat 100.0 5.7E-50 1.2E-54 409.2 36.3 377 78-530 2-385 (386)
4 PRK09295 bifunctional cysteine 100.0 6.6E-46 1.4E-50 400.9 42.9 393 55-521 5-403 (406)
5 PLN02855 Bifunctional selenocy 100.0 6.6E-45 1.4E-49 395.2 43.7 397 56-524 15-420 (424)
6 TIGR03392 FeS_syn_CsdA cystein 100.0 6.6E-44 1.4E-48 384.4 43.6 387 55-522 3-395 (398)
7 PRK10874 cysteine sulfinate de 100.0 1.1E-43 2.4E-48 383.1 44.0 388 54-522 5-398 (401)
8 TIGR01979 sufS cysteine desulf 100.0 1E-42 2.2E-47 375.9 42.4 395 57-522 2-401 (403)
9 PF00266 Aminotran_5: Aminotra 100.0 2.5E-43 5.4E-48 376.4 34.0 364 79-512 1-371 (371)
10 PLN02651 cysteine desulfurase 100.0 3E-42 6.6E-47 366.9 36.4 353 79-510 1-364 (364)
11 TIGR03402 FeS_nifS cysteine de 100.0 1.2E-41 2.5E-46 364.6 39.5 365 79-525 1-375 (379)
12 TIGR03403 nifS_epsilon cystein 100.0 1E-40 2.2E-45 357.6 41.1 370 79-524 1-377 (382)
13 TIGR02006 IscS cysteine desulf 100.0 9.2E-41 2E-45 360.1 40.2 364 78-525 4-380 (402)
14 KOG1549 Cysteine desulfurase N 100.0 7.3E-42 1.6E-46 350.4 29.4 376 76-530 42-426 (428)
15 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.1E-39 4.6E-44 346.7 41.0 367 79-518 1-375 (376)
16 PRK14012 cysteine desulfurase; 100.0 1.4E-38 3E-43 343.5 40.6 370 78-531 4-388 (404)
17 PRK02948 cysteine desulfurase; 100.0 1.6E-38 3.5E-43 340.6 40.0 369 78-525 1-377 (381)
18 TIGR01976 am_tr_V_VC1184 cyste 100.0 2.1E-38 4.5E-43 341.7 40.3 373 55-516 3-397 (397)
19 cd06453 SufS_like Cysteine des 100.0 1.5E-37 3.2E-42 332.2 38.9 367 79-516 1-373 (373)
20 TIGR01814 kynureninase kynuren 100.0 8E-38 1.7E-42 337.7 36.8 384 49-520 4-405 (406)
21 TIGR03235 DNA_S_dndA cysteine 100.0 1.7E-36 3.6E-41 321.6 35.6 345 80-500 1-353 (353)
22 PLN02409 serine--glyoxylate am 100.0 8.5E-34 1.8E-38 305.3 34.8 358 78-523 9-373 (401)
23 cd06451 AGAT_like Alanine-glyo 100.0 5.6E-33 1.2E-37 295.0 33.8 345 84-520 5-355 (356)
24 PRK03080 phosphoserine aminotr 100.0 7.8E-33 1.7E-37 295.4 31.2 354 76-523 11-374 (378)
25 TIGR01788 Glu-decarb-GAD gluta 100.0 1.5E-31 3.2E-36 287.1 41.0 388 43-523 15-430 (431)
26 TIGR02326 transamin_PhnW 2-ami 100.0 4E-31 8.7E-36 281.5 33.8 347 87-520 8-360 (363)
27 PRK02769 histidine decarboxyla 100.0 7.2E-31 1.6E-35 278.1 34.5 336 79-522 24-372 (380)
28 PTZ00094 serine hydroxymethylt 100.0 4.4E-30 9.5E-35 280.3 33.1 359 86-540 43-424 (452)
29 cd00611 PSAT_like Phosphoserin 100.0 1.1E-30 2.3E-35 276.8 24.9 339 84-519 5-353 (355)
30 PLN02590 probable tyrosine dec 100.0 1E-28 2.2E-33 269.8 39.3 422 33-524 91-534 (539)
31 PLN02880 tyrosine decarboxylas 100.0 5.7E-29 1.2E-33 271.9 36.2 417 34-523 44-485 (490)
32 TIGR03799 NOD_PanD_pyr putativ 100.0 2E-28 4.4E-33 267.9 40.5 348 42-422 59-440 (522)
33 cd06450 DOPA_deC_like DOPA dec 100.0 1.4E-29 3E-34 267.7 27.7 315 107-518 24-344 (345)
34 COG0075 Serine-pyruvate aminot 100.0 1.4E-28 2.9E-33 254.4 33.3 346 87-523 14-364 (383)
35 PLN03032 serine decarboxylase; 100.0 1.4E-28 2.9E-33 258.8 33.8 324 92-518 38-372 (374)
36 PRK13479 2-aminoethylphosphona 100.0 1.4E-28 3E-33 262.4 33.1 325 118-523 34-364 (368)
37 COG3844 Kynureninase [Amino ac 100.0 7.5E-29 1.6E-33 242.0 26.4 381 50-523 14-403 (407)
38 PRK13520 L-tyrosine decarboxyl 100.0 5E-28 1.1E-32 258.4 35.4 333 80-521 24-370 (371)
39 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 5.8E-28 1.3E-32 256.1 33.6 322 118-519 28-354 (355)
40 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.1E-27 2.4E-32 256.8 36.0 349 84-522 27-381 (387)
41 TIGR01364 serC_1 phosphoserine 100.0 1.2E-28 2.7E-33 259.2 28.0 335 88-522 2-348 (349)
42 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.9E-27 4.1E-32 254.2 37.2 353 52-518 3-372 (373)
43 PLN02414 glycine dehydrogenase 100.0 5.4E-28 1.2E-32 277.8 34.6 352 116-561 563-945 (993)
44 PRK05355 3-phosphoserine/phosp 100.0 1.7E-28 3.6E-33 259.6 26.7 342 81-522 6-358 (360)
45 TIGR01366 serC_3 phosphoserine 100.0 3.3E-28 7.1E-33 257.8 28.6 343 87-522 12-360 (361)
46 PRK04366 glycine dehydrogenase 100.0 7.6E-27 1.7E-31 256.1 39.3 362 86-525 79-451 (481)
47 cd00613 GDC-P Glycine cleavage 100.0 1.8E-26 3.8E-31 248.9 32.5 358 77-516 21-398 (398)
48 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 4.5E-26 9.8E-31 242.4 34.7 344 87-520 11-360 (361)
49 PRK00451 glycine dehydrogenase 100.0 3.4E-26 7.4E-31 250.3 33.0 322 117-520 108-446 (447)
50 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3E-25 6.5E-30 236.7 34.3 345 86-522 17-368 (370)
51 PRK05937 8-amino-7-oxononanoat 99.9 2.1E-25 4.5E-30 237.9 32.4 330 80-523 14-351 (370)
52 PF00282 Pyridoxal_deC: Pyrido 99.9 9.9E-26 2.1E-30 238.6 29.5 357 35-419 2-372 (373)
53 COG0436 Aspartate/tyrosine/aro 99.9 4.8E-25 1E-29 235.0 33.6 345 77-522 29-391 (393)
54 KOG1360 5-aminolevulinate synt 99.9 8.4E-26 1.8E-30 225.2 24.9 377 78-563 174-563 (570)
55 PRK05367 glycine dehydrogenase 99.9 2.5E-24 5.4E-29 249.0 39.7 391 78-560 501-912 (954)
56 PRK06207 aspartate aminotransf 99.9 1.3E-24 2.8E-29 234.5 34.8 345 76-522 39-402 (405)
57 KOG2862 Alanine-glyoxylate ami 99.9 6.7E-25 1.5E-29 213.0 28.9 350 88-522 27-382 (385)
58 PLN02263 serine decarboxylase 99.9 5.5E-24 1.2E-28 226.9 36.5 356 51-521 75-442 (470)
59 TIGR01437 selA_rel uncharacter 99.9 9.4E-25 2E-29 231.7 30.6 316 87-519 23-362 (363)
60 TIGR01822 2am3keto_CoA 2-amino 99.9 9.5E-25 2.1E-29 235.0 30.1 328 89-522 53-389 (393)
61 PRK12566 glycine dehydrogenase 99.9 9.4E-25 2E-29 246.2 31.0 361 115-561 537-913 (954)
62 PRK05957 aspartate aminotransf 99.9 6.3E-24 1.4E-28 228.2 34.2 344 77-522 28-385 (389)
63 PRK07179 hypothetical protein; 99.9 2.6E-24 5.6E-29 232.6 30.3 328 80-522 64-398 (407)
64 COG0076 GadB Glutamate decarbo 99.9 8.3E-24 1.8E-28 227.7 33.9 338 45-420 34-380 (460)
65 PRK06108 aspartate aminotransf 99.9 4.5E-24 9.8E-29 228.8 31.9 338 78-521 26-381 (382)
66 COG1168 MalY Bifunctional PLP- 99.9 8.9E-24 1.9E-28 212.5 30.4 334 87-522 37-386 (388)
67 cd06454 KBL_like KBL_like; thi 99.9 2.6E-24 5.7E-29 227.6 28.2 324 90-519 17-348 (349)
68 cd00378 SHMT Serine-glycine hy 99.9 4E-24 8.7E-29 230.9 30.0 345 83-524 25-387 (402)
69 PLN02414 glycine dehydrogenase 99.9 1.3E-23 2.8E-28 241.9 34.5 364 47-518 83-465 (993)
70 TIGR00461 gcvP glycine dehydro 99.9 3.4E-23 7.5E-28 235.3 36.8 365 115-561 524-905 (939)
71 TIGR01141 hisC histidinol-phos 99.9 7.2E-24 1.6E-28 224.2 28.7 323 74-517 17-346 (346)
72 PLN02483 serine palmitoyltrans 99.9 1.3E-23 2.9E-28 230.6 30.5 339 80-522 110-466 (489)
73 PRK08056 threonine-phosphate d 99.9 3.2E-23 6.8E-28 220.1 32.0 321 77-521 21-354 (356)
74 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.4E-23 3E-28 222.5 29.1 321 122-517 19-352 (352)
75 PRK08960 hypothetical protein; 99.9 4.9E-23 1.1E-27 221.2 33.4 341 76-520 32-385 (387)
76 PRK04870 histidinol-phosphate 99.9 2.2E-23 4.8E-28 221.4 30.3 325 76-519 26-355 (356)
77 PRK03158 histidinol-phosphate 99.9 1.7E-23 3.7E-28 222.5 29.5 321 77-519 30-358 (359)
78 PRK13392 5-aminolevulinate syn 99.9 2.4E-23 5.3E-28 225.2 31.0 344 76-522 47-397 (410)
79 PRK06225 aspartate aminotransf 99.9 4.6E-23 1E-27 220.9 31.6 339 77-524 29-378 (380)
80 PRK00950 histidinol-phosphate 99.9 4.5E-23 9.7E-28 219.5 31.0 323 77-520 35-360 (361)
81 TIGR03540 DapC_direct LL-diami 99.9 1.1E-22 2.5E-27 218.1 34.2 338 77-517 30-381 (383)
82 PRK08361 aspartate aminotransf 99.9 5E-23 1.1E-27 221.4 31.2 328 89-522 47-390 (391)
83 PRK07681 aspartate aminotransf 99.9 1.1E-22 2.5E-27 219.2 32.8 337 77-518 33-384 (399)
84 PRK00011 glyA serine hydroxyme 99.9 8.8E-23 1.9E-27 221.4 31.3 348 77-522 26-389 (416)
85 TIGR01821 5aminolev_synth 5-am 99.9 1.2E-22 2.5E-27 219.4 32.1 342 78-522 48-396 (402)
86 PRK14807 histidinol-phosphate 99.9 2E-22 4.3E-27 213.5 33.1 324 78-520 24-350 (351)
87 PRK06939 2-amino-3-ketobutyrat 99.9 1.9E-22 4.1E-27 217.3 33.3 329 89-523 57-394 (397)
88 PRK09276 LL-diaminopimelate am 99.9 1.7E-22 3.7E-27 216.9 32.1 337 78-517 33-383 (385)
89 KOG3846 L-kynurenine hydrolase 99.9 2.3E-23 4.9E-28 201.6 22.3 404 42-523 26-462 (465)
90 PRK02731 histidinol-phosphate 99.9 1.1E-22 2.3E-27 217.0 29.8 313 89-521 46-365 (367)
91 PRK13393 5-aminolevulinate syn 99.9 1.1E-22 2.4E-27 219.7 29.9 342 76-522 46-396 (406)
92 PLN00175 aminotransferase fami 99.9 3.9E-22 8.4E-27 215.6 33.9 333 89-521 68-412 (413)
93 PRK09105 putative aminotransfe 99.9 1.5E-22 3.2E-27 215.7 30.3 318 76-520 43-368 (370)
94 PRK07324 transaminase; Validat 99.9 9.1E-23 2E-27 217.8 28.4 297 124-522 65-370 (373)
95 PRK05764 aspartate aminotransf 99.9 4.5E-22 9.8E-27 214.2 34.1 333 89-522 45-391 (393)
96 PLN03026 histidinol-phosphate 99.9 3.3E-22 7E-27 214.0 32.7 325 76-519 52-379 (380)
97 PRK13355 bifunctional HTH-doma 99.9 6.8E-22 1.5E-26 219.7 36.2 341 76-522 146-514 (517)
98 TIGR03537 DapC succinyldiamino 99.9 4.1E-22 8.8E-27 211.1 32.7 324 89-518 14-349 (350)
99 PLN02721 threonine aldolase 99.9 1.5E-22 3.4E-27 214.5 29.2 321 87-521 16-351 (353)
100 PRK07682 hypothetical protein; 99.9 2.8E-22 6E-27 214.7 31.3 330 90-522 35-376 (378)
101 PRK09064 5-aminolevulinate syn 99.9 2.6E-22 5.7E-27 217.0 31.3 330 90-522 62-397 (407)
102 PRK05958 8-amino-7-oxononanoat 99.9 1.6E-22 3.5E-27 216.9 29.0 334 79-519 40-384 (385)
103 PRK05942 aspartate aminotransf 99.9 2.8E-22 6.1E-27 215.8 30.7 338 78-522 37-389 (394)
104 PLN00145 tyrosine/nicotianamin 99.9 8.8E-22 1.9E-26 213.7 34.7 345 76-523 52-425 (430)
105 PRK01533 histidinol-phosphate 99.9 1.6E-22 3.6E-27 215.0 28.3 319 76-523 29-356 (366)
106 COG0156 BioF 7-keto-8-aminopel 99.9 2.7E-22 5.9E-27 209.7 29.3 322 91-519 56-387 (388)
107 PRK05387 histidinol-phosphate 99.9 2.4E-22 5.2E-27 213.2 29.3 324 76-521 24-352 (353)
108 TIGR00858 bioF 8-amino-7-oxono 99.9 2.3E-22 5E-27 213.5 29.2 323 89-517 31-360 (360)
109 PRK11658 UDP-4-amino-4-deoxy-L 99.9 6.3E-22 1.4E-26 211.5 31.5 333 122-520 34-377 (379)
110 PRK06290 aspartate aminotransf 99.9 1.4E-21 3E-26 210.9 34.3 345 78-522 46-405 (410)
111 PRK13580 serine hydroxymethylt 99.9 6.3E-22 1.4E-26 211.7 31.2 354 87-522 59-445 (493)
112 TIGR01825 gly_Cac_T_rel pyrido 99.9 5.8E-22 1.2E-26 212.8 31.1 322 89-522 48-381 (385)
113 PRK07908 hypothetical protein; 99.9 5.2E-22 1.1E-26 210.2 30.3 320 76-523 22-348 (349)
114 PRK08363 alanine aminotransfer 99.9 1.1E-21 2.4E-26 211.4 32.8 347 77-522 31-394 (398)
115 PRK08153 histidinol-phosphate 99.9 1E-21 2.3E-26 209.4 31.4 329 76-525 32-368 (369)
116 PRK05367 glycine dehydrogenase 99.9 1.3E-21 2.9E-26 226.5 34.4 371 43-517 52-437 (954)
117 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.5E-21 3.2E-26 209.2 32.4 340 123-520 31-380 (380)
118 PRK08068 transaminase; Reviewe 99.9 3.2E-21 6.9E-26 207.3 35.1 338 77-517 33-384 (389)
119 PLN02187 rooty/superroot1 99.9 3.6E-21 7.8E-26 210.4 36.0 350 75-524 65-440 (462)
120 PTZ00433 tyrosine aminotransfe 99.9 1.8E-21 3.8E-26 210.7 32.8 345 77-522 34-408 (412)
121 PRK08912 hypothetical protein; 99.9 1.9E-21 4.2E-26 208.9 32.6 334 89-521 40-385 (387)
122 PRK12414 putative aminotransfe 99.9 9.3E-22 2E-26 211.0 30.1 340 78-518 31-383 (384)
123 PLN03226 serine hydroxymethylt 99.9 2.6E-21 5.7E-26 210.7 33.8 352 87-522 44-419 (475)
124 PRK07366 succinyldiaminopimela 99.9 1.3E-21 2.8E-26 210.2 31.1 342 77-519 31-387 (388)
125 PRK07309 aromatic amino acid a 99.9 3E-21 6.5E-26 207.5 33.9 343 78-522 32-388 (391)
126 TIGR03811 tyr_de_CO2_Ent tyros 99.9 1.1E-20 2.4E-25 208.7 38.9 427 49-522 60-602 (608)
127 PLN02822 serine palmitoyltrans 99.9 1.7E-21 3.8E-26 213.5 32.1 342 89-522 124-477 (481)
128 COG0079 HisC Histidinol-phosph 99.9 1.5E-21 3.2E-26 204.8 30.1 328 73-522 19-354 (356)
129 PRK09265 aminotransferase AlaT 99.9 4.7E-21 1E-25 207.0 34.9 344 76-522 33-401 (404)
130 PTZ00377 alanine aminotransfer 99.9 3.7E-21 8E-26 212.0 34.7 356 82-523 82-476 (481)
131 cd06502 TA_like Low-specificit 99.9 3E-22 6.5E-27 211.0 25.0 315 89-518 10-337 (338)
132 PRK07683 aminotransferase A; V 99.9 5.1E-21 1.1E-25 205.5 34.7 342 77-522 29-383 (387)
133 PRK07337 aminotransferase; Val 99.9 1.6E-21 3.5E-26 209.5 30.5 342 76-519 30-386 (388)
134 PRK08064 cystathionine beta-ly 99.9 2.2E-22 4.7E-27 215.4 23.2 309 115-519 48-383 (390)
135 PRK07568 aspartate aminotransf 99.9 4.8E-21 1.1E-25 206.5 33.1 337 77-522 31-392 (397)
136 PRK07777 aminotransferase; Val 99.9 1.8E-21 4E-26 209.0 29.6 333 90-521 39-385 (387)
137 PRK06348 aspartate aminotransf 99.9 4.2E-21 9.1E-26 206.0 32.2 302 120-519 69-382 (384)
138 PLN02376 1-aminocyclopropane-1 99.9 5.7E-21 1.2E-25 210.0 33.8 357 76-522 46-438 (496)
139 PRK13034 serine hydroxymethylt 99.9 5.1E-21 1.1E-25 206.6 32.7 343 87-522 38-392 (416)
140 PRK06107 aspartate aminotransf 99.9 5.1E-21 1.1E-25 206.5 32.8 350 78-523 35-401 (402)
141 TIGR01264 tyr_amTase_E tyrosin 99.9 2.2E-21 4.9E-26 209.3 29.6 345 77-522 32-399 (401)
142 TIGR01329 cysta_beta_ly_E cyst 99.9 3.8E-22 8.1E-27 212.7 23.1 305 121-522 47-375 (378)
143 PRK09082 methionine aminotrans 99.9 1.5E-21 3.3E-26 209.5 27.8 341 78-518 32-385 (386)
144 TIGR01265 tyr_nico_aTase tyros 99.9 2E-20 4.4E-25 202.0 36.6 342 77-522 32-401 (403)
145 PLN02452 phosphoserine transam 99.9 3.2E-21 6.9E-26 203.1 29.2 343 79-522 8-363 (365)
146 PRK07392 threonine-phosphate d 99.9 9.3E-21 2E-25 201.5 33.0 326 77-522 23-359 (360)
147 PRK08134 O-acetylhomoserine am 99.9 3.4E-21 7.3E-26 207.9 29.8 163 115-312 58-225 (433)
148 PLN00143 tyrosine/nicotianamin 99.9 3E-20 6.6E-25 200.8 37.3 367 51-522 15-404 (409)
149 cd00609 AAT_like Aspartate ami 99.9 3.7E-21 8.1E-26 202.9 29.5 299 119-517 38-349 (350)
150 PRK05166 histidinol-phosphate 99.9 7.3E-21 1.6E-25 203.1 31.8 323 77-520 37-369 (371)
151 PRK07550 hypothetical protein; 99.9 7.8E-21 1.7E-25 204.1 32.2 328 89-519 43-384 (386)
152 PRK04635 histidinol-phosphate 99.9 8.4E-22 1.8E-26 209.0 24.1 283 124-519 63-352 (354)
153 TIGR03538 DapC_gpp succinyldia 99.9 6.4E-21 1.4E-25 205.2 31.1 341 77-519 29-392 (393)
154 PRK06358 threonine-phosphate d 99.9 1.7E-20 3.8E-25 198.9 33.4 310 89-520 33-353 (354)
155 PRK01688 histidinol-phosphate 99.9 7.8E-22 1.7E-26 208.9 22.5 284 124-517 60-351 (351)
156 PRK09148 aminotransferase; Val 99.9 1.2E-20 2.7E-25 203.6 32.0 348 77-523 31-391 (405)
157 PRK15481 transcriptional regul 99.9 5.3E-21 1.1E-25 208.3 29.2 294 124-521 124-430 (431)
158 PRK08636 aspartate aminotransf 99.9 4E-20 8.8E-25 199.6 35.8 338 89-522 47-400 (403)
159 PRK03321 putative aminotransfe 99.9 3.3E-21 7.3E-26 204.3 26.9 320 77-521 23-350 (352)
160 PRK09147 succinyldiaminopimela 99.9 1.6E-20 3.5E-25 202.3 32.3 340 77-520 30-394 (396)
161 PLN02656 tyrosine transaminase 99.9 1.6E-20 3.4E-25 203.1 32.2 344 76-522 31-403 (409)
162 KOG0257 Kynurenine aminotransf 99.9 2.2E-21 4.8E-26 197.2 23.6 315 87-464 43-385 (420)
163 PRK06767 methionine gamma-lyas 99.9 2.9E-21 6.4E-26 206.7 25.3 303 122-520 62-383 (386)
164 PRK06836 aspartate aminotransf 99.9 5.5E-20 1.2E-24 197.9 35.0 340 77-522 34-391 (394)
165 PRK07504 O-succinylhomoserine 99.9 6.4E-21 1.4E-25 204.5 27.3 340 77-520 30-393 (398)
166 PRK08175 aminotransferase; Val 99.9 1.1E-19 2.4E-24 195.7 36.5 336 89-522 43-389 (395)
167 COG0399 WecE Predicted pyridox 99.9 3.7E-20 8.1E-25 192.2 31.1 351 91-522 15-373 (374)
168 PF00155 Aminotran_1_2: Aminot 99.9 7.5E-21 1.6E-25 202.4 26.5 298 123-516 46-363 (363)
169 PLN02955 8-amino-7-oxononanoat 99.9 4.7E-20 1E-24 197.2 31.7 333 90-523 118-462 (476)
170 PRK03317 histidinol-phosphate 99.9 2.7E-20 5.9E-25 198.6 29.7 329 78-521 28-363 (368)
171 TIGR01365 serC_2 phosphoserine 99.9 1.9E-20 4.2E-25 197.2 28.0 344 93-522 19-373 (374)
172 PLN02271 serine hydroxymethylt 99.9 6.8E-20 1.5E-24 196.5 31.8 356 87-521 158-539 (586)
173 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.8E-20 1.3E-24 195.6 30.8 333 121-520 31-375 (376)
174 PLN02509 cystathionine beta-ly 99.9 1.4E-20 3E-25 203.6 25.8 304 121-523 133-462 (464)
175 PRK05968 hypothetical protein; 99.9 1.5E-20 3.3E-25 201.1 25.9 307 120-519 62-387 (389)
176 PRK02610 histidinol-phosphate 99.9 1.3E-19 2.9E-24 193.6 32.9 329 78-522 30-371 (374)
177 PLN03227 serine palmitoyltrans 99.9 9.9E-20 2.1E-24 195.2 31.8 343 91-523 15-383 (392)
178 PRK08861 cystathionine gamma-s 99.9 2.7E-20 5.8E-25 198.1 27.2 308 120-518 52-383 (388)
179 PRK05839 hypothetical protein; 99.9 8.2E-20 1.8E-24 195.2 31.1 331 76-521 24-373 (374)
180 PRK13238 tnaA tryptophanase/L- 99.9 4.7E-19 1E-23 192.7 36.8 404 36-532 9-442 (460)
181 TIGR01140 L_thr_O3P_dcar L-thr 99.9 3.8E-20 8.3E-25 194.3 27.4 276 124-517 50-330 (330)
182 PRK04781 histidinol-phosphate 99.9 5.4E-20 1.2E-24 195.8 28.8 291 124-521 62-362 (364)
183 PRK03967 histidinol-phosphate 99.9 8.5E-20 1.9E-24 192.2 30.0 202 76-315 18-222 (337)
184 PLN02607 1-aminocyclopropane-1 99.9 2.4E-19 5.3E-24 194.9 33.8 359 75-524 46-439 (447)
185 PRK08133 O-succinylhomoserine 99.9 4.3E-20 9.4E-25 197.7 27.5 162 119-315 59-226 (390)
186 PLN02450 1-aminocyclopropane-1 99.9 1.7E-19 3.7E-24 197.5 32.3 358 76-523 38-431 (468)
187 TIGR01328 met_gam_lyase methio 99.9 4.4E-20 9.5E-25 197.6 26.9 306 121-521 59-389 (391)
188 PRK08776 cystathionine gamma-s 99.9 5.8E-20 1.2E-24 197.2 27.8 307 121-518 60-390 (405)
189 PRK14809 histidinol-phosphate 99.9 2.1E-19 4.6E-24 190.9 31.6 319 77-521 31-356 (357)
190 KOG0629 Glutamate decarboxylas 99.9 4.1E-20 8.9E-25 186.8 24.1 360 34-422 64-436 (510)
191 PRK08249 cystathionine gamma-s 99.9 5E-20 1.1E-24 197.4 26.4 310 115-517 58-392 (398)
192 PRK06855 aminotransferase; Val 99.9 2.5E-19 5.5E-24 194.9 32.2 347 87-522 47-429 (433)
193 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.8E-19 6E-24 188.2 31.3 325 51-519 7-344 (346)
194 PRK07812 O-acetylhomoserine am 99.9 7.3E-20 1.6E-24 197.3 27.3 327 120-524 68-433 (436)
195 cd00615 Orn_deC_like Ornithine 99.9 1.2E-20 2.6E-25 194.8 19.8 223 120-396 58-293 (294)
196 PRK06425 histidinol-phosphate 99.9 1.7E-19 3.8E-24 189.5 28.9 283 123-520 42-331 (332)
197 PRK08045 cystathionine gamma-s 99.9 2.1E-19 4.5E-24 191.8 29.5 305 120-517 51-381 (386)
198 TIGR03542 DAPAT_plant LL-diami 99.9 3.2E-19 7E-24 192.5 31.2 339 76-519 33-401 (402)
199 cd00614 CGS_like CGS_like: Cys 99.9 1.2E-19 2.7E-24 193.3 27.4 311 115-520 34-368 (369)
200 PRK06460 hypothetical protein; 99.9 1.1E-19 2.5E-24 193.5 26.9 314 113-521 37-373 (376)
201 PRK07811 cystathionine gamma-s 99.9 7.5E-20 1.6E-24 195.7 25.4 160 121-315 61-226 (388)
202 PRK08248 O-acetylhomoserine am 99.9 1.5E-19 3.3E-24 195.1 27.0 158 121-313 64-226 (431)
203 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.2E-19 2.6E-24 193.8 25.9 303 120-518 53-378 (380)
204 PRK05613 O-acetylhomoserine am 99.9 1.4E-19 3E-24 195.2 26.4 163 115-311 63-230 (437)
205 PLN02231 alanine transaminase 99.9 1E-18 2.3E-23 193.3 33.9 325 113-523 164-528 (534)
206 PRK08574 cystathionine gamma-s 99.9 1.6E-19 3.4E-24 192.8 26.4 160 119-313 51-215 (385)
207 PRK07590 L,L-diaminopimelate a 99.9 4.9E-19 1.1E-23 191.6 30.5 347 77-519 35-408 (409)
208 PRK06234 methionine gamma-lyas 99.9 4E-19 8.6E-24 190.9 29.3 307 122-517 65-396 (400)
209 PRK07503 methionine gamma-lyas 99.8 2.3E-19 4.9E-24 192.9 26.4 161 120-315 64-230 (403)
210 PRK06084 O-acetylhomoserine am 99.8 4E-19 8.6E-24 191.7 28.1 158 120-312 57-219 (425)
211 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 7.2E-19 1.6E-23 187.8 29.9 333 121-520 31-374 (375)
212 TIGR02080 O_succ_thio_ly O-suc 99.8 2.7E-19 5.9E-24 190.8 26.5 306 121-521 51-380 (382)
213 TIGR01324 cysta_beta_ly_B cyst 99.8 2.4E-19 5.2E-24 190.6 25.6 302 121-520 50-374 (377)
214 PRK12462 phosphoserine aminotr 99.8 8.5E-19 1.8E-23 182.8 29.1 341 84-522 10-362 (364)
215 PRK09028 cystathionine beta-ly 99.8 2.6E-19 5.6E-24 190.4 25.7 158 123-315 63-226 (394)
216 PRK07671 cystathionine beta-ly 99.8 2.9E-19 6.3E-24 190.4 25.7 305 119-519 48-375 (377)
217 PF01041 DegT_DnrJ_EryC1: DegT 99.8 6.2E-19 1.3E-23 187.5 27.8 329 121-517 25-363 (363)
218 PRK05939 hypothetical protein; 99.8 4.1E-19 8.9E-24 190.1 26.5 158 120-312 46-207 (397)
219 PRK07810 O-succinylhomoserine 99.8 5.4E-19 1.2E-23 189.7 26.9 309 121-519 70-401 (403)
220 PRK07865 N-succinyldiaminopime 99.8 9.1E-19 2E-23 186.6 28.6 310 88-517 40-363 (364)
221 KOG0628 Aromatic-L-amino-acid/ 99.8 3.7E-18 8E-23 174.7 31.1 411 33-526 34-475 (511)
222 PLN02672 methionine S-methyltr 99.8 2E-18 4.4E-23 199.5 32.9 350 76-520 697-1078(1082)
223 TIGR00474 selA seryl-tRNA(sec) 99.8 3.3E-18 7.1E-23 184.6 32.3 203 77-315 81-304 (454)
224 PLN02242 methionine gamma-lyas 99.8 7.7E-19 1.7E-23 189.1 27.4 316 115-522 70-415 (418)
225 PRK08114 cystathionine beta-ly 99.8 2.9E-19 6.4E-24 189.4 23.8 237 115-420 56-316 (395)
226 PRK06176 cystathionine gamma-s 99.8 4.3E-19 9.3E-24 189.1 25.1 160 119-314 48-213 (380)
227 TIGR03539 DapC_actino succinyl 99.8 9.7E-19 2.1E-23 185.8 27.8 309 87-516 33-356 (357)
228 PRK07505 hypothetical protein; 99.8 2E-18 4.2E-23 186.4 30.4 348 66-523 37-400 (402)
229 KOG0259 Tyrosine aminotransfer 99.8 1.5E-17 3.3E-22 166.3 33.1 350 77-523 62-434 (447)
230 PRK05994 O-acetylhomoserine am 99.8 1.1E-18 2.3E-23 188.8 26.9 156 122-312 64-224 (427)
231 COG1003 GcvP Glycine cleavage 99.8 3.7E-18 8E-23 173.7 28.8 336 116-525 104-450 (496)
232 PRK14808 histidinol-phosphate 99.8 3.1E-18 6.8E-23 180.1 29.7 308 76-519 19-334 (335)
233 PRK06959 putative threonine-ph 99.8 2E-18 4.2E-23 181.9 28.0 274 124-523 56-334 (339)
234 PRK07582 cystathionine gamma-l 99.8 6.2E-19 1.3E-23 187.3 24.4 292 122-518 52-365 (366)
235 COG2008 GLY1 Threonine aldolas 99.8 7.8E-19 1.7E-23 176.8 23.3 322 86-520 9-341 (342)
236 PRK03244 argD acetylornithine 99.8 7.9E-18 1.7E-22 181.5 32.9 333 67-522 35-394 (398)
237 COG1167 ARO8 Transcriptional r 99.8 4.9E-18 1.1E-22 185.2 31.2 308 117-523 132-456 (459)
238 PRK05664 threonine-phosphate d 99.8 3.4E-18 7.4E-23 179.6 28.7 273 124-522 52-328 (330)
239 PRK08247 cystathionine gamma-s 99.8 1.7E-18 3.7E-23 184.1 26.5 231 116-419 47-287 (366)
240 PRK04311 selenocysteine syntha 99.8 1.5E-17 3.2E-22 180.1 33.8 206 76-315 85-309 (464)
241 PRK00854 rocD ornithine--oxo-a 99.8 1.2E-17 2.5E-22 180.4 32.9 333 79-521 42-400 (401)
242 PRK07269 cystathionine gamma-s 99.8 9.8E-19 2.1E-23 185.2 23.9 299 120-520 53-362 (364)
243 PRK15407 lipopolysaccharide bi 99.8 5.3E-18 1.2E-22 183.7 29.4 349 123-521 65-435 (438)
244 PRK04073 rocD ornithine--oxo-a 99.8 1.5E-17 3.3E-22 179.1 32.3 335 66-520 31-395 (396)
245 cd00610 OAT_like Acetyl ornith 99.8 1.5E-17 3.3E-22 180.2 32.1 341 79-519 37-412 (413)
246 PRK08354 putative aminotransfe 99.8 1.1E-17 2.5E-22 174.1 29.6 185 76-311 8-196 (311)
247 PRK06702 O-acetylhomoserine am 99.8 8.1E-18 1.8E-22 180.5 29.1 331 121-524 61-426 (432)
248 PRK10534 L-threonine aldolase; 99.8 3.4E-18 7.4E-23 179.9 25.1 309 88-520 11-331 (333)
249 KOG1359 Glycine C-acetyltransf 99.8 2.7E-18 5.8E-23 165.8 21.3 334 79-522 71-412 (417)
250 TIGR03801 asp_4_decarbox aspar 99.8 2.3E-17 5E-22 180.1 30.5 341 122-523 133-517 (521)
251 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.8E-17 6E-22 177.7 30.5 160 120-314 56-220 (418)
252 PTZ00125 ornithine aminotransf 99.8 9.8E-17 2.1E-21 173.2 34.3 348 66-523 22-396 (400)
253 KOG1368 Threonine aldolase [Am 99.8 4.7E-18 1E-22 164.6 21.0 293 123-518 58-364 (384)
254 PRK07050 cystathionine beta-ly 99.8 7.3E-18 1.6E-22 180.5 24.8 163 117-314 61-229 (394)
255 PRK09275 aspartate aminotransf 99.8 2.3E-17 5E-22 180.4 28.7 360 88-523 113-518 (527)
256 PRK07049 methionine gamma-lyas 99.8 2.3E-17 4.9E-22 178.4 28.1 309 123-521 85-425 (427)
257 cd00617 Tnase_like Tryptophana 99.8 7.2E-17 1.6E-21 173.3 30.7 330 123-532 55-417 (431)
258 TIGR03531 selenium_SpcS O-phos 99.8 2.9E-17 6.3E-22 176.0 27.6 242 119-405 103-354 (444)
259 PTZ00376 aspartate aminotransf 99.8 1.2E-17 2.7E-22 180.2 25.0 297 119-522 74-403 (404)
260 PRK05967 cystathionine beta-ly 99.8 1.2E-17 2.5E-22 177.4 24.0 162 117-315 60-229 (395)
261 PRK09440 avtA valine--pyruvate 99.8 7.3E-17 1.6E-21 175.1 29.9 314 119-524 76-413 (416)
262 PRK06434 cystathionine gamma-l 99.8 1.6E-17 3.5E-22 176.3 23.3 306 116-520 59-382 (384)
263 cd01494 AAT_I Aspartate aminot 99.8 5.7E-18 1.2E-22 159.2 17.6 163 123-312 2-170 (170)
264 COG0112 GlyA Glycine/serine hy 99.8 8.4E-17 1.8E-21 162.9 26.8 341 88-523 37-391 (413)
265 PRK01278 argD acetylornithine 99.8 3.8E-16 8.3E-21 167.9 33.6 339 66-522 22-388 (389)
266 PRK09257 aromatic amino acid a 99.8 8.3E-17 1.8E-21 173.5 27.6 198 91-311 47-260 (396)
267 TIGR00707 argD acetylornithine 99.8 1.8E-16 4E-21 169.8 30.1 321 86-519 41-378 (379)
268 COG2873 MET17 O-acetylhomoseri 99.8 3.2E-16 6.8E-21 157.0 27.0 325 120-521 61-424 (426)
269 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 9.6E-17 2.1E-21 169.1 23.0 238 121-407 66-329 (417)
270 PRK08637 hypothetical protein; 99.8 6.8E-16 1.5E-20 165.9 29.3 154 141-313 71-243 (388)
271 PRK02936 argD acetylornithine 99.8 2.9E-15 6.3E-20 160.4 34.1 327 66-519 20-376 (377)
272 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 7E-16 1.5E-20 163.4 28.5 312 113-520 47-385 (386)
273 TIGR03246 arg_catab_astC succi 99.7 2.8E-15 6.1E-20 161.4 32.6 344 66-522 26-395 (397)
274 PRK02627 acetylornithine amino 99.7 3.8E-15 8.3E-20 160.6 33.3 338 67-522 31-394 (396)
275 PLN02368 alanine transaminase 99.7 8.9E-16 1.9E-20 164.9 27.1 179 118-315 108-313 (407)
276 COG1103 Archaea-specific pyrid 99.7 2.4E-15 5.3E-20 144.0 25.9 202 86-315 26-235 (382)
277 TIGR01885 Orn_aminotrans ornit 99.7 8.3E-15 1.8E-19 158.1 33.6 334 79-520 38-400 (401)
278 PLN02397 aspartate transaminas 99.7 7.8E-16 1.7E-20 167.0 25.6 257 176-522 139-421 (423)
279 PLN02624 ornithine-delta-amino 99.7 7.8E-15 1.7E-19 160.9 33.7 346 66-523 66-445 (474)
280 KOG1357 Serine palmitoyltransf 99.7 4.3E-16 9.3E-21 159.1 21.7 343 79-525 145-505 (519)
281 TIGR00461 gcvP glycine dehydro 99.7 9.6E-15 2.1E-19 166.9 33.9 372 43-517 40-426 (939)
282 PRK15029 arginine decarboxylas 99.7 2.1E-14 4.5E-19 162.0 34.5 174 120-314 204-402 (755)
283 PRK04260 acetylornithine amino 99.7 2E-14 4.4E-19 153.7 32.1 334 65-519 19-374 (375)
284 COG4992 ArgD Ornithine/acetylo 99.7 3.1E-14 6.6E-19 146.6 31.1 334 64-523 31-399 (404)
285 PF00464 SHMT: Serine hydroxym 99.7 1.1E-15 2.4E-20 160.5 20.9 345 88-516 31-399 (399)
286 PRK03715 argD acetylornithine 99.7 3.8E-14 8.3E-19 152.0 32.1 342 66-522 27-393 (395)
287 PRK05964 adenosylmethionine--8 99.7 1.5E-14 3.2E-19 157.1 29.1 361 65-522 32-422 (423)
288 PRK05093 argD bifunctional N-s 99.7 4.7E-14 1E-18 152.4 31.8 343 66-522 31-400 (403)
289 KOG1383 Glutamate decarboxylas 99.7 9.5E-14 2.1E-18 143.1 30.2 321 116-525 115-449 (491)
290 COG0626 MetC Cystathionine bet 99.7 2.7E-14 5.7E-19 149.6 26.4 312 115-521 57-393 (396)
291 PRK12381 bifunctional succinyl 99.7 6.6E-14 1.4E-18 151.2 29.7 344 66-523 30-400 (406)
292 COG1932 SerC Phosphoserine ami 99.7 2.7E-14 5.8E-19 144.0 23.8 340 87-522 14-363 (365)
293 PRK11522 putrescine--2-oxoglut 99.6 1.2E-13 2.5E-18 150.6 30.4 345 67-525 74-454 (459)
294 PRK15400 lysine decarboxylase 99.6 2.4E-13 5.2E-18 151.8 32.3 314 120-522 194-559 (714)
295 PRK15399 lysine decarboxylase 99.6 6.6E-13 1.4E-17 148.3 35.5 313 121-522 195-559 (713)
296 KOG2142 Molybdenum cofactor su 99.6 2.8E-16 6.2E-21 166.3 8.1 421 78-555 21-498 (728)
297 PRK08117 4-aminobutyrate amino 99.6 1.9E-13 4E-18 149.0 30.5 356 67-523 35-430 (433)
298 PLN02760 4-aminobutyrate:pyruv 99.6 2.4E-13 5.3E-18 149.5 31.5 368 66-523 80-492 (504)
299 KOG0256 1-aminocyclopropane-1- 99.6 8.1E-14 1.8E-18 141.1 24.9 295 138-521 146-460 (471)
300 TIGR03372 putres_am_tran putre 99.6 6.3E-13 1.4E-17 143.9 33.7 340 67-519 67-441 (442)
301 PRK06541 hypothetical protein; 99.6 4.8E-13 1E-17 146.0 32.9 373 64-524 41-457 (460)
302 PRK06777 4-aminobutyrate amino 99.6 8.6E-13 1.9E-17 142.9 34.1 352 66-520 31-419 (421)
303 PRK08360 4-aminobutyrate amino 99.6 1.8E-12 3.9E-17 141.0 36.1 352 67-523 33-427 (443)
304 PRK13578 ornithine decarboxyla 99.6 5.1E-13 1.1E-17 149.3 32.3 173 121-315 174-372 (720)
305 TIGR02618 tyr_phenol_ly tyrosi 99.6 9.5E-14 2.1E-18 147.0 23.9 322 123-525 73-429 (450)
306 TIGR02407 ectoine_ectB diamino 99.6 1.8E-12 3.9E-17 140.0 34.3 348 66-522 26-412 (412)
307 PRK13237 tyrosine phenol-lyase 99.6 2.5E-13 5.4E-18 144.3 26.8 318 123-525 80-436 (460)
308 PRK09221 beta alanine--pyruvat 99.6 1.2E-12 2.5E-17 142.6 32.7 366 64-522 38-443 (445)
309 KOG0053 Cystathionine beta-lya 99.6 1.1E-13 2.4E-18 143.0 23.3 155 123-312 79-239 (409)
310 COG0160 GabT 4-aminobutyrate a 99.6 1.9E-12 4.1E-17 137.4 33.1 348 77-522 55-445 (447)
311 PF02347 GDC-P: Glycine cleava 99.6 5.9E-13 1.3E-17 140.4 28.6 249 115-402 104-368 (429)
312 PRK13360 omega amino acid--pyr 99.6 1.2E-12 2.6E-17 142.3 31.7 364 66-522 37-440 (442)
313 PLN00144 acetylornithine trans 99.6 2.3E-12 5E-17 137.9 32.8 336 67-522 7-380 (382)
314 TIGR00700 GABAtrnsam 4-aminobu 99.6 4.6E-12 1E-16 137.4 35.4 355 66-521 24-419 (420)
315 PRK06173 adenosylmethionine--8 99.6 1.5E-12 3.3E-17 140.9 30.9 352 66-522 35-425 (429)
316 PRK08593 4-aminobutyrate amino 99.6 9.6E-12 2.1E-16 135.5 36.6 356 66-523 33-430 (445)
317 KOG0634 Aromatic amino acid am 99.6 6.8E-13 1.5E-17 135.6 25.2 323 118-522 101-466 (472)
318 PRK09792 4-aminobutyrate trans 99.6 5.8E-12 1.3E-16 136.5 34.2 355 66-521 31-420 (421)
319 PRK06058 4-aminobutyrate amino 99.6 6.2E-12 1.3E-16 137.2 34.6 359 66-522 47-442 (443)
320 PRK12403 putative aminotransfe 99.6 1.2E-11 2.5E-16 135.3 35.5 361 65-525 44-455 (460)
321 PRK07495 4-aminobutyrate amino 99.6 1.3E-11 2.8E-16 133.7 35.4 356 66-523 31-422 (425)
322 PRK06062 hypothetical protein; 99.6 1.1E-11 2.3E-16 135.3 34.8 350 66-523 44-446 (451)
323 TIGR00713 hemL glutamate-1-sem 99.6 3E-12 6.4E-17 139.3 30.5 337 78-522 48-422 (423)
324 PRK06918 4-aminobutyrate amino 99.6 1.9E-11 4.1E-16 133.8 36.8 358 66-523 45-444 (451)
325 PRK05769 4-aminobutyrate amino 99.6 1.7E-11 3.6E-16 133.5 35.8 354 66-522 45-439 (441)
326 PRK07986 adenosylmethionine--8 99.6 3.2E-12 6.8E-17 138.3 29.9 352 66-522 34-423 (428)
327 PRK04612 argD acetylornithine 99.5 1.1E-11 2.3E-16 133.6 32.8 347 65-522 30-403 (408)
328 PRK06105 aminotransferase; Pro 99.5 4.9E-12 1.1E-16 138.2 30.4 369 66-525 39-452 (460)
329 KOG1402 Ornithine aminotransfe 99.5 5.5E-12 1.2E-16 124.4 27.2 344 64-521 48-426 (427)
330 KOG2040 Glycine dehydrogenase 99.5 3.4E-12 7.4E-17 135.2 27.3 334 115-523 576-919 (1001)
331 PRK07482 hypothetical protein; 99.5 1.2E-11 2.7E-16 135.1 33.1 366 66-523 41-455 (461)
332 PRK07678 aminotransferase; Val 99.5 3.4E-11 7.3E-16 131.5 36.0 367 66-522 38-449 (451)
333 COG3977 Alanine-alpha-ketoisov 99.5 5.6E-12 1.2E-16 122.8 26.3 322 118-525 75-414 (417)
334 PRK09264 diaminobutyrate--2-ox 99.5 3E-11 6.6E-16 131.1 35.2 348 66-523 30-417 (425)
335 PRK07036 hypothetical protein; 99.5 1.3E-11 2.9E-16 135.0 32.3 358 66-523 42-453 (466)
336 PRK05965 hypothetical protein; 99.5 1.5E-11 3.3E-16 134.4 32.7 363 66-523 37-448 (459)
337 PRK06943 adenosylmethionine--8 99.5 1E-11 2.2E-16 135.4 30.6 363 64-523 43-447 (453)
338 PRK08088 4-aminobutyrate amino 99.5 1.7E-11 3.6E-16 133.3 31.6 343 78-522 41-423 (425)
339 PRK06916 adenosylmethionine--8 99.5 1.2E-11 2.7E-16 135.1 30.1 368 66-523 47-456 (460)
340 TIGR00508 bioA adenosylmethion 99.5 1.8E-11 3.9E-16 132.7 31.0 352 67-522 37-426 (427)
341 PRK05639 4-aminobutyrate amino 99.5 2E-11 4.3E-16 133.2 31.3 356 67-524 45-445 (457)
342 COG0403 GcvP Glycine cleavage 99.5 8.7E-11 1.9E-15 120.6 33.2 377 44-519 52-447 (450)
343 PRK05630 adenosylmethionine--8 99.5 1.6E-11 3.5E-16 132.7 29.8 352 66-522 31-420 (422)
344 PRK06082 4-aminobutyrate amino 99.5 4.9E-11 1.1E-15 130.3 33.6 342 79-523 73-452 (459)
345 KOG0633 Histidinol phosphate a 99.5 6.3E-13 1.4E-17 126.9 16.1 286 130-519 78-374 (375)
346 PRK07030 adenosylmethionine--8 99.5 2.1E-11 4.6E-16 133.3 30.0 357 66-523 38-447 (466)
347 PRK07480 putative aminotransfe 99.5 2.6E-11 5.7E-16 132.3 29.6 361 66-523 41-449 (456)
348 PRK04013 argD acetylornithine/ 99.5 4.2E-11 9E-16 126.7 30.0 321 66-522 15-360 (364)
349 PRK00615 glutamate-1-semialdeh 99.5 1E-10 2.2E-15 126.6 33.5 205 78-315 53-286 (433)
350 TIGR00709 dat 2,4-diaminobutyr 99.5 2.6E-10 5.6E-15 124.3 36.0 364 65-524 29-437 (442)
351 PRK12389 glutamate-1-semialdeh 99.5 1E-10 2.3E-15 127.0 32.6 334 78-522 53-427 (428)
352 PRK08742 adenosylmethionine--8 99.5 9.3E-11 2E-15 128.2 32.2 364 65-523 54-468 (472)
353 COG1982 LdcC Arginine/lysine/o 99.5 2.4E-11 5.2E-16 130.7 26.5 284 121-455 70-372 (557)
354 PRK07481 hypothetical protein; 99.5 2.7E-10 5.8E-15 124.3 35.3 364 66-522 33-445 (449)
355 PRK00062 glutamate-1-semialdeh 99.5 5.8E-11 1.3E-15 129.0 29.8 341 79-522 51-424 (426)
356 PLN02482 glutamate-1-semialdeh 99.5 3.2E-10 7E-15 123.9 35.6 229 49-315 51-331 (474)
357 PF01212 Beta_elim_lyase: Beta 99.5 2.6E-13 5.7E-18 138.5 10.4 194 89-315 7-211 (290)
358 PRK06149 hypothetical protein; 99.4 2.2E-10 4.7E-15 136.1 36.4 347 78-523 585-971 (972)
359 PRK06917 hypothetical protein; 99.4 4E-10 8.6E-15 122.8 35.6 365 66-523 22-438 (447)
360 COG0001 HemL Glutamate-1-semia 99.4 1.4E-10 3E-15 121.1 29.0 199 79-315 54-285 (432)
361 COG0161 BioA Adenosylmethionin 99.4 4.2E-11 9.2E-16 126.4 25.4 361 66-524 35-445 (449)
362 PRK07483 hypothetical protein; 99.4 3.8E-10 8.3E-15 122.8 33.7 365 66-523 21-438 (443)
363 PRK06148 hypothetical protein; 99.4 2.2E-10 4.9E-15 136.1 34.2 345 78-524 624-1012(1013)
364 KOG0258 Alanine aminotransfera 99.4 1E-10 2.2E-15 118.1 25.6 323 89-463 87-441 (475)
365 PRK07046 aminotransferase; Val 99.4 2.9E-10 6.3E-15 123.9 31.0 227 49-315 28-302 (453)
366 PRK06938 diaminobutyrate--2-ox 99.4 7E-10 1.5E-14 121.3 34.0 361 66-522 54-460 (464)
367 TIGR03251 LAT_fam L-lysine 6-t 99.4 3.6E-10 7.9E-15 122.8 30.0 358 66-519 28-431 (431)
368 KOG2467 Glycine/serine hydroxy 99.4 3.9E-10 8.5E-15 112.9 27.1 353 89-523 52-427 (477)
369 PF12897 Aminotran_MocR: Alani 99.4 2.2E-10 4.7E-15 116.6 25.7 316 120-521 68-414 (425)
370 PRK06931 diaminobutyrate--2-ox 99.4 2.6E-09 5.6E-14 116.8 35.2 361 66-525 49-457 (459)
371 TIGR00699 GABAtrns_euk 4-amino 99.4 1.3E-09 2.8E-14 118.5 32.4 214 217-519 237-463 (464)
372 PRK08297 L-lysine aminotransfe 99.3 1.4E-09 2.9E-14 118.6 28.8 356 66-522 35-441 (443)
373 COG1921 SelA Selenocysteine sy 99.3 4E-10 8.6E-15 116.4 23.1 196 87-316 37-240 (395)
374 PRK12566 glycine dehydrogenase 99.3 2.8E-09 6E-14 121.9 31.8 367 44-517 56-439 (954)
375 KOG1404 Alanine-glyoxylate ami 99.3 3E-10 6.5E-15 115.0 20.5 342 76-516 48-432 (442)
376 TIGR02617 tnaA_trp_ase tryptop 99.2 1.7E-09 3.7E-14 113.9 22.3 319 123-525 76-444 (467)
377 COG1448 TyrB Aspartate/tyrosin 99.2 4.9E-09 1.1E-13 106.7 23.3 327 79-519 35-395 (396)
378 PRK06209 glutamate-1-semialdeh 99.2 2.4E-08 5.3E-13 108.6 29.8 210 66-316 39-269 (431)
379 PLN02974 adenosylmethionine-8- 99.2 3.1E-08 6.8E-13 114.0 31.4 226 219-520 567-816 (817)
380 KOG2790 Phosphoserine aminotra 99.2 4E-09 8.6E-14 102.4 19.7 339 87-522 16-368 (370)
381 PF03841 SelA: L-seryl-tRNA se 99.1 6.6E-11 1.4E-15 121.2 6.1 196 87-316 16-230 (367)
382 KOG1358 Serine palmitoyltransf 99.1 1.3E-08 2.9E-13 103.1 21.0 339 91-522 111-465 (467)
383 KOG1401 Acetylornithine aminot 99.1 2.2E-07 4.7E-12 95.3 29.3 285 67-400 48-354 (433)
384 PF05889 SLA_LP_auto_ag: Solub 99.0 1.2E-09 2.7E-14 112.8 11.1 169 121-310 56-235 (389)
385 PF06838 Met_gamma_lyase: Meth 99.0 5.4E-08 1.2E-12 98.8 21.6 167 122-317 55-243 (403)
386 PF00202 Aminotran_3: Aminotra 99.0 8E-08 1.7E-12 101.2 23.3 225 67-315 8-263 (339)
387 COG3033 TnaA Tryptophanase [Am 98.9 1.3E-06 2.8E-11 88.0 26.1 327 124-525 82-447 (471)
388 COG4100 Cystathionine beta-lya 98.3 1.4E-05 3.1E-10 78.7 14.6 167 124-316 68-253 (416)
389 KOG1403 Predicted alanine-glyo 98.3 5.4E-05 1.2E-09 74.7 17.3 350 76-524 45-439 (452)
390 PF04864 Alliinase_C: Allinase 98.2 0.00011 2.5E-09 74.5 18.2 156 126-315 51-212 (363)
391 KOG1412 Aspartate aminotransfe 98.1 0.00025 5.4E-09 70.6 18.4 252 183-523 127-406 (410)
392 KOG2040 Glycine dehydrogenase 97.7 0.0022 4.8E-08 69.6 18.9 296 121-517 163-478 (1001)
393 KOG1405 4-aminobutyrate aminot 97.5 0.0054 1.2E-07 62.3 16.9 213 217-522 254-483 (484)
394 KOG1411 Aspartate aminotransfe 97.0 0.016 3.5E-07 58.8 13.5 125 183-309 148-285 (427)
395 KOG0630 Predicted pyridoxal-de 95.8 0.2 4.3E-06 53.2 13.8 133 182-315 232-377 (838)
396 PLN02994 1-aminocyclopropane-1 95.7 0.046 9.9E-07 50.4 8.1 55 119-192 94-152 (153)
397 KOG3843 Predicted serine hydro 94.9 0.11 2.3E-06 51.0 7.9 127 177-310 100-236 (432)
398 PF03476 MOSC_N: MOSC N-termin 71.5 1.3 2.8E-05 39.0 0.0 28 526-555 4-38 (120)
399 PF05368 NmrA: NmrA-like famil 55.2 50 0.0011 32.2 8.0 70 184-264 26-95 (233)
400 PF05378 Hydant_A_N: Hydantoin 49.0 1.3E+02 0.0028 28.4 9.2 45 215-263 130-176 (176)
401 COG1184 GCD2 Translation initi 48.8 3.2E+02 0.007 28.1 13.2 121 120-269 99-227 (301)
402 TIGR02026 BchE magnesium-proto 47.8 1.2E+02 0.0026 33.8 10.2 87 198-294 32-121 (497)
403 PRK13397 3-deoxy-7-phosphohept 46.4 3.2E+02 0.0069 27.4 12.8 62 215-276 132-197 (250)
404 PRK13396 3-deoxy-7-phosphohept 43.7 4.2E+02 0.0091 28.0 13.9 63 215-278 218-286 (352)
405 TIGR01501 MthylAspMutase methy 42.2 1.6E+02 0.0034 26.4 8.1 64 198-271 25-91 (134)
406 PF02310 B12-binding: B12 bind 41.9 2.2E+02 0.0048 24.3 10.0 66 198-273 24-91 (121)
407 COG0616 SppA Periplasmic serin 40.0 1.1E+02 0.0025 31.7 8.0 91 215-315 79-173 (317)
408 PF10087 DUF2325: Uncharacteri 39.0 1.7E+02 0.0037 24.3 7.5 66 192-268 13-80 (97)
409 COG1954 GlpP Glycerol-3-phosph 36.3 71 0.0015 29.8 5.0 51 217-277 12-64 (181)
410 cd02067 B12-binding B12 bindin 35.9 2.8E+02 0.0061 23.7 9.4 84 198-295 23-109 (119)
411 TIGR01362 KDO8P_synth 3-deoxy- 35.9 1.8E+02 0.0039 29.1 8.1 65 208-274 119-186 (258)
412 smart00642 Aamy Alpha-amylase 35.7 32 0.00069 32.1 2.8 33 239-271 59-91 (166)
413 cd02072 Glm_B12_BD B12 binding 34.8 3.2E+02 0.0069 24.3 8.8 67 198-274 23-92 (128)
414 PRK10886 DnaA initiator-associ 33.1 3.4E+02 0.0073 26.1 9.4 30 235-268 112-141 (196)
415 TIGR02035 D_Ser_am_lyase D-ser 32.8 3.6E+02 0.0078 29.4 10.6 51 142-210 155-206 (431)
416 PF00128 Alpha-amylase: Alpha 32.7 34 0.00074 34.7 2.7 37 235-271 37-73 (316)
417 TIGR01138 cysM cysteine syntha 32.1 2.8E+02 0.0061 28.3 9.4 52 141-210 61-113 (290)
418 KOG2142 Molybdenum cofactor su 32.0 23 0.0005 39.6 1.4 168 126-315 181-362 (728)
419 COG0031 CysK Cysteine synthase 31.2 2.6E+02 0.0057 28.8 8.7 58 137-212 60-118 (300)
420 COG0296 GlgB 1,4-alpha-glucan 31.0 41 0.0009 38.2 3.1 39 235-273 199-237 (628)
421 COG0541 Ffh Signal recognition 30.4 6.6E+02 0.014 27.4 11.7 128 122-271 74-223 (451)
422 PRK02261 methylaspartate mutas 30.3 4E+02 0.0087 23.8 10.7 65 198-272 27-94 (137)
423 PRK12595 bifunctional 3-deoxy- 30.1 6.9E+02 0.015 26.5 13.8 60 216-275 236-299 (360)
424 cd06448 L-Ser-dehyd Serine deh 29.9 5.4E+02 0.012 26.6 11.2 52 141-210 53-105 (316)
425 cd06447 D-Ser-dehyd D-Serine d 29.7 5.3E+02 0.012 27.8 11.2 52 141-210 136-188 (404)
426 KOG3055 Phosphoribosylformimin 29.5 5E+02 0.011 24.7 10.2 66 141-226 62-129 (263)
427 cd02070 corrinoid_protein_B12- 29.3 4E+02 0.0086 25.5 9.4 76 186-271 89-173 (201)
428 PLN03033 2-dehydro-3-deoxyphos 28.6 6.5E+02 0.014 25.7 12.7 66 207-274 132-200 (290)
429 cd01561 CBS_like CBS_like: Thi 28.4 4.4E+02 0.0096 26.7 10.1 29 183-211 80-108 (291)
430 KOG2004 Mitochondrial ATP-depe 26.9 3E+02 0.0065 31.9 8.8 38 373-423 412-449 (906)
431 PLN02970 serine racemase 25.7 3E+02 0.0064 28.7 8.4 52 141-210 77-129 (328)
432 PRK00685 metal-dependent hydro 25.0 6E+02 0.013 24.3 10.1 59 201-263 156-214 (228)
433 COG2870 RfaE ADP-heptose synth 24.9 1.2E+02 0.0027 32.3 5.1 63 204-270 115-178 (467)
434 cd02071 MM_CoA_mut_B12_BD meth 24.8 4.6E+02 0.01 22.7 8.2 64 198-271 23-89 (122)
435 PRK09441 cytoplasmic alpha-amy 23.8 63 0.0014 35.8 3.0 30 242-271 73-102 (479)
436 PRK11889 flhF flagellar biosyn 23.7 9.7E+02 0.021 26.1 16.3 128 121-271 218-361 (436)
437 PLN03013 cysteine synthase 23.6 3.4E+02 0.0074 29.6 8.4 53 141-211 177-230 (429)
438 PRK00771 signal recognition pa 23.3 1E+03 0.022 26.1 12.7 29 494-522 389-417 (437)
439 PRK02991 D-serine dehydratase; 23.1 8E+02 0.017 26.8 11.3 51 142-210 160-211 (441)
440 PF04309 G3P_antiterm: Glycero 23.1 8.5 0.00018 36.2 -3.4 41 233-278 19-61 (175)
441 cd01455 vWA_F11C1-5a_type Von 23.0 2.3E+02 0.005 27.1 6.2 52 219-270 95-149 (191)
442 TIGR01139 cysK cysteine syntha 22.3 7.2E+02 0.016 25.3 10.4 52 141-210 59-111 (298)
443 cd07014 S49_SppA Signal peptid 22.3 1.7E+02 0.0037 27.3 5.2 81 214-301 20-105 (177)
444 cd01137 PsaA Metal binding pro 22.2 8.3E+02 0.018 24.8 12.2 69 190-266 183-252 (287)
445 PRK12723 flagellar biosynthesi 21.7 1E+03 0.022 25.6 14.0 54 217-273 241-298 (388)
446 PLN02565 cysteine synthase 21.5 4.1E+02 0.0089 27.6 8.4 52 141-210 69-121 (322)
447 PRK10595 SOS cell division inh 21.1 6.6E+02 0.014 23.4 8.6 80 177-265 53-136 (164)
448 PRK11761 cysM cysteine synthas 21.0 7.1E+02 0.015 25.4 10.0 52 141-210 65-117 (296)
449 cd07018 S49_SppA_67K_type Sign 20.7 3.6E+02 0.0079 26.2 7.4 79 215-301 28-111 (222)
450 PRK05638 threonine synthase; V 20.7 5E+02 0.011 28.4 9.2 51 141-209 114-165 (442)
451 PLN00011 cysteine synthase 20.7 6.9E+02 0.015 25.9 9.9 52 141-210 71-123 (323)
452 PF08659 KR: KR domain; Inter 20.6 5.8E+02 0.013 23.7 8.6 79 178-259 23-109 (181)
453 COG1066 Sms Predicted ATP-depe 20.5 1E+03 0.022 25.9 10.7 80 183-268 123-215 (456)
454 PRK09354 recA recombinase A; P 20.1 9.7E+02 0.021 25.3 10.7 80 184-268 91-192 (349)
455 PRK07476 eutB threonine dehydr 20.1 8.6E+02 0.019 25.1 10.5 51 142-210 70-121 (322)
456 COG0552 FtsY Signal recognitio 20.0 4.9E+02 0.011 27.3 8.2 144 141-310 141-304 (340)
457 cd02069 methionine_synthase_B1 20.0 5.4E+02 0.012 25.0 8.3 81 181-271 90-177 (213)
458 PLN03244 alpha-amylase; Provis 20.0 87 0.0019 36.6 3.1 35 238-272 429-463 (872)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-58 Score=487.43 Aligned_cols=394 Identities=31% Similarity=0.481 Sum_probs=349.6
Q ss_pred HHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 043646 55 LAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL 134 (625)
Q Consensus 55 ~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~ 134 (625)
+..+|++|+.....+ + ++++|||++++++.|..|++++.+++..+++|+|.+.+..+...++.++++|+.+|+++
T Consensus 5 ~~~~r~~fp~l~~~~----~-~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~ 79 (405)
T COG0520 5 VAAVRADFPALKREV----G-KPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL 79 (405)
T ss_pred hHHHHhhCHHHhhcc----C-CCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 455888888764333 2 56899999999999999999999999999999998888888899999999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH----cCCeEEEEec
Q 043646 135 GGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ----SLAEVVEIGL 210 (625)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~----~G~~vv~v~~ 210 (625)
|+++.++|+|| .|+|.+|+.++.+++.. +++||+ ||+++.+|+|+..+|+. .|++++++|+
T Consensus 80 ~a~~~~eIvft-~~tT~aln~va~~l~~~------------~~~gde--Iv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~ 144 (405)
T COG0520 80 NADSSDEIVFT-RGTTEALNLVARGLGRS------------LKPGDE--IVVSDLEHHSNIVPWQELAKRTGAKVRVIPL 144 (405)
T ss_pred CCCCCCeEEEe-CChhHHHHHHHHHhhhh------------hcCCCE--EEEccCcchhhHHHHHHHHHhcCcEEEEEec
Confidence 99964489999 89999999999988521 468885 99999999999999975 4899999999
Q ss_pred CCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCc
Q 043646 211 DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYD 290 (625)
Q Consensus 211 ~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D 290 (625)
+++|.++++++++.++ ++||+|++++++|.||.+.|+++|+++||++|++++||+||++|+.++|++++ ++|
T Consensus 145 ~~~g~~~~~~~~~~i~-----~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~D 216 (405)
T COG0520 145 DDDGLLDLDALEKLIT-----PKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCD 216 (405)
T ss_pred CCCCCcCHHHHHHhcC-----CCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCC
Confidence 9999999999999887 79999999999999999999999999999999999999999999999999998 999
Q ss_pred EEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHH
Q 043646 291 AIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALA 368 (625)
Q Consensus 291 ~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~ 368 (625)
|+++|+|||++||.|+|+|++++++ ++.+.|...||+++.++... ....+.+...+|+.|||++.+.++ ++++
T Consensus 217 f~afsgHKwl~gP~GiGvLy~r~~~--l~~l~P~~~gg~~~~~~~~~---~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~ 291 (405)
T COG0520 217 FLAFSGHKWLLGPTGIGVLYVRKEL--LEELEPFLGGGGMIEYVSRD---EGVTLAELPLRFEAGTPNIAGAIGLAAALD 291 (405)
T ss_pred EEEEcccccccCCCceEEEEEchHH--HhhcCCcccCCCceeeeccc---ccccccCcchhhccCCchHHHHHhHHHHHH
Confidence 9999999999999999999999999 77889999999998877531 244556668999999999999886 5555
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhh
Q 043646 369 FWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFN 448 (625)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 448 (625)
+. +.+|++.|.+|++.+++++.+.|+++|+++++++.+..+.++++|.+.. +++.+++..|.
T Consensus 292 ~~--~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~----------------~~~~dv~~~L~ 353 (405)
T COG0520 292 YL--LEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG----------------IHPHDVATLLD 353 (405)
T ss_pred HH--HHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC----------------CCHHHHHHHHH
Confidence 55 7889999999999999999999999999999998655799999999954 46889999996
Q ss_pred hhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 449 DLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 449 ~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
+ .||.+|.|++|+.|+ +..+++. +.+|+|+++|||++|||+|+++|+++..
T Consensus 354 ~-~gI~vr~g~~ca~p~-~~~~~~~--------------------~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 354 E-KGIAVRAGHHCAQPL-HRLLGVD--------------------ATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred h-CCeEEEeccccccHH-HHhcCCC--------------------CceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 5 689999999999887 5556643 5699999999999999999999998754
No 2
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=7.9e-52 Score=478.01 Aligned_cols=450 Identities=19% Similarity=0.219 Sum_probs=352.1
Q ss_pred HHHHHHH-HhhcCCCccccCCCCCCceEeccCCCCCcchH-HHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 043646 53 EKLAWLR-SQIIGNDVEFDYSFGKRRLTYADHTASGRSLR-YIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYI 130 (625)
Q Consensus 53 ~~~~~lr-~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~-~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~i 130 (625)
..++.+| .+|+.. ...+||||++++++++ .|.+++..++...++|||+ .+..+..+.+.++++|+.+
T Consensus 19 ~~~~~~R~~~fp~l----------~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s-~~~~s~~~~~~~e~aR~~i 87 (805)
T PLN02724 19 KPIDELRATEFARL----------KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHS-QSDSSMRSSDTIESARQQV 87 (805)
T ss_pred hhHHHHHHHHhhhc----------CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCc-CcchhhhHHHHHHHHHHHH
Confidence 4588899 478776 4589999999998664 6666666666778899996 4556777889999999999
Q ss_pred HHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH---HcCCeEE
Q 043646 131 KRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR---QSLAEVV 206 (625)
Q Consensus 131 a~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv 206 (625)
++++|+++++ +|+|| +|+|++++.++..+. +++||+ |+++..+|+++...++ ..|++++
T Consensus 88 a~~lga~~~~~~VvFt-snaT~alnlva~~l~--------------~~~gd~--Iv~t~~eH~svl~~~~~a~~~G~~v~ 150 (805)
T PLN02724 88 LEYFNAPPSDYACVFT-SGATAALKLVGETFP--------------WSSESH--FCYTLENHNSVLGIREYALEKGAAAI 150 (805)
T ss_pred HHHhCCCccceEEEEe-CChHHHHHHHHHHCC--------------CCCCCe--EEEeeccccchHHHHHHHHHcCCeEE
Confidence 9999998765 68999 789999999988773 567885 8889999999874432 2499999
Q ss_pred EEecC--------CCCCCCH--HHHHHHHHH-----hhhCCCCeEEEEecccCccccccCHHHHHHHHHHc--------C
Q 043646 207 EIGLD--------DNGLLDI--EALRSQLEL-----YKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY--------G 263 (625)
Q Consensus 207 ~v~~~--------~~~~ld~--~~L~~~l~~-----~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--------g 263 (625)
.++++ ..+.+++ ++|++.++. ....+++++|++++++|.||.+.|+++|..+++.. +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 99886 3344544 567665420 00124678999999999999999999876555532 3
Q ss_pred CEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccc
Q 043646 264 GFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 264 ~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (625)
+++++|+||++|+.++|+..+ ++|++++|+|||+|+|.|+|+|++++++ +..+.|.++||+++.+... ......
T Consensus 231 ~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~S~HK~~GgP~G~G~L~vr~~~--~~~l~p~~~GGg~~~~~~~-~~~~~~ 304 (805)
T PLN02724 231 WMVLLDAAKGCGTSPPDLSRY---PADFVVVSFYKIFGYPTGLGALLVRRDA--AKLLKKKYFGGGTVAASIA-DIDFVK 304 (805)
T ss_pred eEEEeehhhhcCCCCCChhhc---CCCEEEEecceeccCCCCceEEEEehhh--hhhhcCCccCCCceEEEec-ccceee
Confidence 689999999999999999988 8999999999999999999999999988 5567888999887654321 001112
Q ss_pred cccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC------cEEEeCCCC-----CC
Q 043646 344 YLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ------NIQVLGNTS-----VK 410 (625)
Q Consensus 344 ~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~------gv~v~~~~~-----~~ 410 (625)
.....+.+|+.||+++.+++. ++++++ ..+|++.|.+|+..|++++++.|.+++ +++++++.. ..
T Consensus 305 ~~~~~~~rfE~GT~n~~~i~~l~aal~~l--~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~ 382 (805)
T PLN02724 305 RRERVEQRFEDGTISFLSIAALRHGFKLL--NRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHI 382 (805)
T ss_pred ccccHHHHhcCCCcchhHHHHHHHHHHHH--HHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCccc
Confidence 234457899999999998864 555555 678999999999999999999999886 699998641 35
Q ss_pred CcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCC-
Q 043646 411 RQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYL- 489 (625)
Q Consensus 411 ~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~- 489 (625)
++++++|++.... +..+++.++..++ +.+||.+|+||+|+.++++.++++.+.+ +.+.+.+|+.
T Consensus 383 r~~ivsFnv~~~~-----------~~~v~~~~v~~l~-~~~gI~vR~G~~Ca~~~~~~~lg~~~~~---l~~~~~~~~~c 447 (805)
T PLN02724 383 QGPIVTFNLKRAD-----------GSWVGHREVEKLA-SLSGIQLRTGCFCNPGACAKYLGLSHKD---LQANFEAGHVC 447 (805)
T ss_pred ccCEEEEEEEcCC-----------CCEeCHHHHHHHH-HhcCcEEeeccccCchHHHHHcCCCHHH---HHHHhhcCCcc
Confidence 8999999997532 3346666777655 6789999999999988887777776542 3334555543
Q ss_pred --------CCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh----------------------------hhcccCcccc
Q 043646 490 --------GVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG----------------------------HRFLPLYHFN 533 (625)
Q Consensus 490 --------g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~----------------------------~~~~~~y~~~ 533 (625)
+...|++|+|+++|+|.+|||+|+++|++.+-.. .+...||.||
T Consensus 448 ~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~iYP 527 (805)
T PLN02724 448 WDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVSTPKKRGNVTLRSKRTIPLPVLERKESFDSHRLKSITVYP 527 (805)
T ss_pred CchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcCCCCCCcccccCcccccCCCccccccCCCCEEEEEEEec
Confidence 4445999999999999999999999999976222 1234578999
Q ss_pred cccc------cccccccchhhhhhhhcc
Q 043646 534 VKAG------NWCSSQKAIKDLIDKETN 555 (625)
Q Consensus 534 ~~~~------~w~~~~~~~~~~~~~~~~ 555 (625)
+||| +|.+.+.||++| |+||
T Consensus 528 VKS~~g~~v~~a~~~~~Gl~~D--R~~~ 553 (805)
T PLN02724 528 IKSCAGFSVERWPLSETGLLYD--REWM 553 (805)
T ss_pred cccCCCceeeEEEEeccccccc--ceEE
Confidence 9999 899999999999 9997
No 3
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-50 Score=409.23 Aligned_cols=377 Identities=22% Similarity=0.293 Sum_probs=320.4
Q ss_pred eEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
.+||||++++|..+.|++++...+...|+||++ .|.+|+...+.++++|+.|++++|+++. +|+|| ||.|++.+.++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-eIiFT-SG~TEsnNlaI 78 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-EIIFT-SGATESNNLAI 78 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-cCCcHHHHHHH
Confidence 589999999999999999999999999999999 5778999999999999999999999996 89999 56666555554
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc---CCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS---LAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~---G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
...-...+ -++..+ +|+++..+|+++...++.+ |.+|.++|++.+|.+|+++|+++|+ ++|
T Consensus 79 ~g~~~a~~----------~~~~~~-HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-----~~T 142 (386)
T COG1104 79 KGAALAYR----------NAQKGK-HIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-----PDT 142 (386)
T ss_pred HhhHHhhh----------cccCCC-eEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-----CCc
Confidence 43111100 011222 6999999999999988766 9999999999999999999999999 689
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
.+|++.++||.||++.|+++|+++|+++|+++|+|++|++|.+++|+..+ ++|++++|.||+. ||.|+|+||+++.
T Consensus 143 ~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK~~-GpkGiGaLyv~~~ 218 (386)
T COG1104 143 ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHKFG-GPKGIGALYVRPG 218 (386)
T ss_pred eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhhcc-CCCceEEEEECCC
Confidence 99999999999999999999999999999999999999999999999987 8999999999985 5999999999776
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
. .+.|...|||+ +..++.||.|+.+++..+.++.+ ....++....+...+++++.+.
T Consensus 219 ~----~~~p~i~GGgQ------------------E~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~ 275 (386)
T COG1104 219 V----RLEPLIHGGGQ------------------ERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDG 275 (386)
T ss_pred C----ccCceeccCcC------------------CCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 6 57899999998 77889999999988754433321 1233566778888999999999
Q ss_pred hCCC-CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch---hhHhhh
Q 043646 395 ILPN-QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP---YGHTLL 470 (625)
Q Consensus 395 L~~l-~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~---~~~~~l 470 (625)
|.+. |.+.+.+.. ..|+|++..+.+++. .++.+...| ++.||.+.+|++|..+ ..|.+.
T Consensus 276 l~~~~p~~~~~g~~-~~rlP~~~~~~f~gv---------------~gE~ll~~L-~~~gI~vStGSACsS~~~~pShVL~ 338 (386)
T COG1104 276 LLEIIPDVYLNGDD-EPRLPNILNFSFPGV---------------EGESLLLAL-DLAGIAVSTGSACSSGSLEPSHVLR 338 (386)
T ss_pred HHhcCCcEEEcCCc-ccCCCCeEEEEeCCC---------------cHHHHHHhc-cccCeEEeccccccCCCCCccHHHH
Confidence 9865 899988875 678998888887753 455666666 6789999999999976 788888
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcccCc
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLY 530 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~~~~~y 530 (625)
.++.++..+ .+.+|||++.++|++|++++++++++++....+..|++
T Consensus 339 AmG~~~e~a-------------~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~~~ 385 (386)
T COG1104 339 AMGISEELA-------------HGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELSPLW 385 (386)
T ss_pred HcCCChHHh-------------CccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 887766554 69999999999999999999999999999988877765
No 4
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=6.6e-46 Score=400.88 Aligned_cols=393 Identities=24% Similarity=0.343 Sum_probs=315.4
Q ss_pred HHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 043646 55 LAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL 134 (625)
Q Consensus 55 ~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~ 134 (625)
++.+|++|+.... .+.+ .+.+|||++++++.|+.|++++.+++...+.|++.+.+..+....+.++++|+.+++++
T Consensus 5 ~~~~r~~fp~~~~---~~~~-~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 80 (406)
T PRK09295 5 VEKVRADFPVLSR---EVNG-LPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI 80 (406)
T ss_pred hHHHHhhCccccC---cCCC-CceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence 4678999987521 0112 35799999999999999999999999877788876556667778899999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH----HcCCeEEEEec
Q 043646 135 GGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGL 210 (625)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~ 210 (625)
|+.++++|+|| +|++++++.++.++... .+++||+ |+++..+|+++...|. ..|++++.+++
T Consensus 81 ~~~~~~~v~~t-~g~t~~l~~~~~~~~~~-----------~~~~gd~--vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T PRK09295 81 NARSAEELVFV-RGTTEGINLVANSWGNS-----------NVRAGDN--IIISEMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_pred CcCCCCeEEEe-CCHHHHHHHHHHHhhhh-----------cCCCcCE--EEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 98433489998 78999999988765211 1467885 9999999999876654 46999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCc
Q 043646 211 DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYD 290 (625)
Q Consensus 211 ~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D 290 (625)
+.++.+|+++|+++++ +++++|++++++|+||.+.|+++|+++||++|+++++|++|+.|+.++++..+ ++|
T Consensus 147 ~~~~~~d~~~l~~~i~-----~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~D 218 (406)
T PRK09295 147 NPDGTLQLETLPALFD-----ERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQAL---DCD 218 (406)
T ss_pred CCCCCCCHHHHHHhcC-----CCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhc---CCC
Confidence 8888899999999987 58999999999999999999999999999999999999999999999999876 899
Q ss_pred EEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHH
Q 043646 291 AIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALA 368 (625)
Q Consensus 291 ~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~ 368 (625)
++++|+||++| |.|+|++++++++ ++.++|...||+.+..... .....+.....+++.||+++.++++ ++++
T Consensus 219 ~~~~s~~K~~g-p~G~G~l~~~~~~--~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~ 292 (406)
T PRK09295 219 FYVFSGHKLYG-PTGIGILYVKEAL--LQEMPPWEGGGSMIATVSL---TEGTTWAKAPWRFEAGTPNTGGIIGLGAALD 292 (406)
T ss_pred EEEeehhhccC-CCCcEEEEEchHh--HhhCCCcccCCceeeeeec---CCccccCCchhhcCCCCccHHHHHHHHHHHH
Confidence 99999999665 8899999999987 4556665544444333211 0111123345789999999988765 4455
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhh
Q 043646 369 FWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFN 448 (625)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 448 (625)
++ ...|++.+.++.+.+++++++.|.++++++++++. .+.++++|.+.. .++.++.+.|
T Consensus 293 ~~--~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~--~~~~iv~~~~~~----------------~~~~~~~~~L- 351 (406)
T PRK09295 293 YV--SALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ--NRLGVIAFNLGK----------------HHAYDVGSFL- 351 (406)
T ss_pred HH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC--CCceEEEEEECC----------------cCHHHHHHHH-
Confidence 55 56799999999999999999999999999999873 467899998642 2356788877
Q ss_pred hhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 449 DLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 449 ~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
+++||.++.|++|+.+.... ++ .++++|+|+++|+|++|||+++++|+++..
T Consensus 352 ~~~gI~v~~g~~c~~~~~~~-~~--------------------~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 352 DNYGIAVRTGHHCAMPLMAY-YN--------------------VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HhCCeEEeccccchHHHHHH-HC--------------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 56899999999998543221 11 247899999999999999999999998754
No 5
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=6.6e-45 Score=395.19 Aligned_cols=397 Identities=25% Similarity=0.353 Sum_probs=317.9
Q ss_pred HHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC
Q 043646 56 AWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG 135 (625)
Q Consensus 56 ~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g 135 (625)
+.+|++|+..+ ..+.| +..+|||+++.++.|+.|.+++.+++..+..|++...+..+....+.++++|+.+++++|
T Consensus 15 ~~~r~~fp~~~---~~~~~-~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 90 (424)
T PLN02855 15 AETRPDFPILD---QTVNG-SKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN 90 (424)
T ss_pred HHHHHhCchhc---cccCC-CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC
Confidence 55789997652 11223 358999999999999999999999888777787765444556667788999999999999
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH----HcCCeEEEEecC
Q 043646 136 GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGLD 211 (625)
Q Consensus 136 ~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~ 211 (625)
++++++|+|| +|+|++++.++..+++. .+++|++ |+++..+|+++...|+ ..|++++.++++
T Consensus 91 ~~~~~~v~~t-~g~t~al~~i~~~~~~~-----------~~~~gd~--vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~ 156 (424)
T PLN02855 91 ASTSREIVFT-RNATEAINLVAYTWGLA-----------NLKPGDE--VILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT 156 (424)
T ss_pred CCCCCEEEEe-CCHHHHHHHHHHHhhhh-----------cCCCcCE--EEECCCccHHHHHHHHHHHHHcCCEEEEEecC
Confidence 9654489998 78899999988765311 1467885 9999999999876664 459999999998
Q ss_pred CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcE
Q 043646 212 DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDA 291 (625)
Q Consensus 212 ~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~ 291 (625)
.++.+|+++++++++ +++++|++++++|+||.+.|+++|+++||++|+++++|++|+.|..++++..+ ++|+
T Consensus 157 ~~~~~~~~~l~~~i~-----~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~ 228 (424)
T PLN02855 157 PDEVLDVEQLKELLS-----EKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADF 228 (424)
T ss_pred CCCCcCHHHHHHHhc-----cCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCE
Confidence 777899999999997 58999999999999999999999999999999999999999999999998876 8899
Q ss_pred EEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHH
Q 043646 292 IFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAF 369 (625)
Q Consensus 292 v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~ 369 (625)
+++|+||++ ||.|+|++++++++ ++.++|...||..+.... . +...+...+.+++.||+++.+++. +++++
T Consensus 229 ~~~s~~K~~-gp~G~G~l~~~~~~--~~~~~p~~~g~~~~~~~~--~--~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~ 301 (424)
T PLN02855 229 LVASSHKMC-GPTGIGFLWGKSDL--LESMPPFLGGGEMISDVF--L--DHSTYAPPPSRFEAGTPAIGEAIGLGAAIDY 301 (424)
T ss_pred EEeeccccc-CCCccEEEEEchhh--hhcCCCEecCCCceeeee--c--CccccCCChhhccCCChHHHHHHHHHHHHHH
Confidence 999999965 58899999999988 556777665554432211 0 111122335788999999988764 45555
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCC---CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHH
Q 043646 370 WVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTS---VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATL 446 (625)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~---~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 446 (625)
+ ..+|++++.+|+..+++++++.|.++++++++++.+ ..+.++++|.+.. ++..++.+.
T Consensus 302 ~--~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~----------------~~~~~v~~~ 363 (424)
T PLN02855 302 L--SEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEG----------------IHPTDLSTF 363 (424)
T ss_pred H--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECC----------------cCHHHHHHH
Confidence 5 567999999999999999999999999999998643 3567888887632 235689999
Q ss_pred hhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 447 FNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 447 L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
|.+++||.++.|++|+.+. +..+++ ++++|||+++|+|++|+++++++|++++....
T Consensus 364 L~~~~gI~v~~g~~c~~~~-~~~~g~--------------------~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 364 LDQQHGVAIRSGHHCAQPL-HRYLGV--------------------NASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred hcccCCEEEechhhhhHHH-HHHhCC--------------------CCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 8665699999999998443 333332 37899999999999999999999999887643
No 6
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=6.6e-44 Score=384.43 Aligned_cols=387 Identities=25% Similarity=0.320 Sum_probs=309.5
Q ss_pred HHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 043646 55 LAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL 134 (625)
Q Consensus 55 ~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~ 134 (625)
++.+|++|+... +..+|||++++++.|+.|.+++.+++....+|++...+..+....+.++++|+.+++++
T Consensus 3 ~~~~r~~fp~l~---------~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 73 (398)
T TIGR03392 3 PAQFRQQFPALQ---------DGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL 73 (398)
T ss_pred hhHHHHhCCccC---------CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 467899997541 35899999999999999999999988777788876555566677889999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH----HHcCCeEEEEec
Q 043646 135 GGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW----RQSLAEVVEIGL 210 (625)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~ 210 (625)
|+++.++|+|| +|++++++.++.++... .+++||+ |+++..+|+++...| +..|++++.+++
T Consensus 74 g~~~~~~i~~t-~g~t~~l~~~~~~~~~~-----------~~~~gd~--Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 139 (398)
T TIGR03392 74 NAPDAENIVWT-RGTTESINLVAQSYARP-----------RLQPGDE--IIVSEAEHHANLIPWLMVAQQTGAKVVKLPI 139 (398)
T ss_pred CCCCCCeEEEe-CChHHHHHHHHHHhhhc-----------cCCCCCE--EEECCcchhHHHHHHHHHHHHcCcEEEEEec
Confidence 99643489998 78899999998876210 1467885 999999999976554 456999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCc
Q 043646 211 DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYD 290 (625)
Q Consensus 211 ~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D 290 (625)
+.++.+|+++|+++++ ++|++|++++++|+||.+.|+++|+++||++|+++++|++|+.++.++++..+ ++|
T Consensus 140 ~~~~~~~~~~l~~~i~-----~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d 211 (398)
T TIGR03392 140 GADLLPDIRQLPELLT-----PRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQAL---DID 211 (398)
T ss_pred CCCCCcCHHHHHHHhc-----cCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhc---CCC
Confidence 8888899999999997 58999999999999999999999999999999999999999999998888776 789
Q ss_pred EEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHH
Q 043646 291 AIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALA 368 (625)
Q Consensus 291 ~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~ 368 (625)
++++|+||++| |.|+|++++++++ ++.++|...|+....... + ..........+++.||+++.+++. ++++
T Consensus 212 ~~~~s~~K~~g-p~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~e~GT~~~~~~~a~~~al~ 284 (398)
T TIGR03392 212 FYAFSGHKLYG-PTGIGVLYGKTEL--LEAMPPWQGGGKMLSHVS-F---DGFIPQAVPHRFEAGTPNIAGVIGLSAALE 284 (398)
T ss_pred EEEEecccccC-CCceEEEEEcHHH--HhhCCCeecCCceEeecc-c---cccccCCChhhccCCCCCHHHHHHHHHHHH
Confidence 99999999765 8889999999887 455666543333322211 1 111122345788999999888764 5555
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhh
Q 043646 369 FWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFN 448 (625)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 448 (625)
++ ...|.+.+.++...+++++++.|.++++++++++. ..++++|.+. + ++..++.+.|.
T Consensus 285 ~l--~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~---~~~i~~~~~~-~---------------~~~~~l~~~L~ 343 (398)
T TIGR03392 285 WL--TDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCP---GSSLLAFDFA-G---------------VHHSDLAALLA 343 (398)
T ss_pred HH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC---CCcEEEEEeC-C---------------cCHHHHHHHHH
Confidence 55 56789999999999999999999999999988653 3578887653 2 24668888885
Q ss_pred hhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 449 DLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 449 ~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
++||.+++|++|+.+... .++ .++++|||+++|+|++|+++++++|++++..
T Consensus 344 -~~gI~v~~g~~~~~~~~~-~~g--------------------~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 344 -ESGIALRAGQHCAQPLMA-ALG--------------------VSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred -hCCEEEecCccchHHHHH-HhC--------------------CCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 579999999999844322 112 2489999999999999999999999988764
No 7
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.1e-43 Score=383.08 Aligned_cols=388 Identities=24% Similarity=0.311 Sum_probs=310.6
Q ss_pred HHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 043646 54 KLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRC 133 (625)
Q Consensus 54 ~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~ 133 (625)
.++.+|++|+... ++.+|||+++.++.|+.|++++.+++...++|++...+..+..+.+.++++|+.++++
T Consensus 5 ~~~~~r~~fp~l~---------~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~ 75 (401)
T PRK10874 5 NPAQFRAQFPALQ---------DAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQL 75 (401)
T ss_pred CHHHHHHhCCCcC---------CceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 3477899997551 4589999999999999999999999988888887765666778889999999999999
Q ss_pred hCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH----HHcCCeEEEEe
Q 043646 134 LGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW----RQSLAEVVEIG 209 (625)
Q Consensus 134 ~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~ 209 (625)
+|+...++|+|| +|++++++.++.++... .+++||+ |++++.+|+++...| +..|++++.++
T Consensus 76 ~g~~~~~~i~~~-~~~t~~i~~~~~~~~~~-----------~~~~gd~--vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 141 (401)
T PRK10874 76 LNAPDAKNIVWT-RGTTESINLVAQSYARP-----------RLQPGDE--IIVSEAEHHANLVPWLMVAQQTGAKVVKLP 141 (401)
T ss_pred cCCCCCCEEEEE-CCHHHHHHHHHHHhhhc-----------cCCCcCE--EEECCcchHHHHHHHHHHHHHhCCEEEEEe
Confidence 999433389998 78999999998876210 1468885 999999999976555 34699999999
Q ss_pred cCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCC
Q 043646 210 LDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGY 289 (625)
Q Consensus 210 ~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~ 289 (625)
++.++.+|+++++++++ ++|++|++++++|+||.+.|+++|+++||++|+++++|++|+.+..++++..+ ++
T Consensus 142 ~~~~~~~d~~~l~~~i~-----~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~ 213 (401)
T PRK10874 142 LGADRLPDVDLLPELIT-----PRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DI 213 (401)
T ss_pred cCCCCcCCHHHHHHhcC-----cCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CC
Confidence 98888899999999997 68999999999999999999999999999999999999999999999888776 79
Q ss_pred cEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHH
Q 043646 290 DAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AAL 367 (625)
Q Consensus 290 D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal 367 (625)
|++++|+||++| |.|+|+++++++. ++.+.|...|+...... .|. .........+++.||+++.++++ +++
T Consensus 214 d~~~~s~~K~~g-p~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~e~Gt~~~~~~~al~~al 286 (401)
T PRK10874 214 DFYAFSGHKLYG-PTGIGVLYGKSEL--LEAMSPWQGGGKMLTEV-SFD---GFTPQSAPWRFEAGTPNVAGVIGLSAAL 286 (401)
T ss_pred CEEEEecccccC-CCccEEEEEchHH--HhcCCCeecCCcceEee-ccC---ccCCCCChhhccCCCcCHHHHHHHHHHH
Confidence 999999999765 8889999999988 55666654333322211 110 01112235788999999877754 555
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHh
Q 043646 368 AFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLF 447 (625)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L 447 (625)
+++ +..|.+.+.++...+++++.+.|+++|+++++.+. ..++++|.+. + ++..++.+.|
T Consensus 287 ~~l--~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~---~~~i~~~~~~-~---------------~~~~~~~~~L 345 (401)
T PRK10874 287 EWL--ADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQ---DSSLLAFDFA-G---------------VHHSDLVTLL 345 (401)
T ss_pred HHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC---CCcEEEEEEC-C---------------cCHHHHHHHH
Confidence 554 56789999999999999999999999999988653 3567777652 2 2456888888
Q ss_pred hhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 448 NDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 448 ~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+ +||.+++|+.|+.+.... ++ ..+++|||+++|+|++||++++++|+++++.
T Consensus 346 ~~-~gI~v~~g~~~~~~~~~~-~g--------------------~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 346 AE-YGIALRAGQHCAQPLLAA-LG--------------------VTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred HH-CCcEEeccccchHHHHHH-hC--------------------CCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 54 799999999997443221 12 2489999999999999999999999998764
No 8
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1e-42 Score=375.92 Aligned_cols=395 Identities=26% Similarity=0.385 Sum_probs=311.9
Q ss_pred HHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC
Q 043646 57 WLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG 136 (625)
Q Consensus 57 ~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~ 136 (625)
.+|++|+..+. .+.| +..+|||+++.++.|+.|.+++.+.+...++|++...+..+....+.++++|+.+++++|+
T Consensus 2 ~~~~~f~~~~~---~~~~-~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~ 77 (403)
T TIGR01979 2 NIRADFPILKR---KING-KPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINA 77 (403)
T ss_pred chhhhCchhcC---CCCC-CceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 46778866521 1223 4689999999999999999999998887788887655555666778899999999999999
Q ss_pred CCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH----HcCCeEEEEecCC
Q 043646 137 GQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGLDD 212 (625)
Q Consensus 137 ~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~ 212 (625)
++.++|+|| +|++++++.++.++... .+++|++ |+++..+|+++...|+ ..|++++.++++.
T Consensus 78 ~~~~~v~~~-~g~t~~l~~~~~~~~~~-----------~~~~g~~--vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~ 143 (403)
T TIGR01979 78 ASDEEIVFT-RGTTESINLVAYSWGDS-----------NLKAGDE--IVISEMEHHANIVPWQLLAERTGATLKFIPLDD 143 (403)
T ss_pred CCCCeEEEe-CCHHHHHHHHHHHhhhh-----------cCCCCCE--EEECcchhhHHHHHHHHHHHhcCcEEEEEecCC
Confidence 843489998 78899999888776311 1467775 9999999999875553 4699999999998
Q ss_pred CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEE
Q 043646 213 NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAI 292 (625)
Q Consensus 213 ~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v 292 (625)
++.+|+++|+++++ ++|++|++++++|+||.+.|+++|+++||++|+++++|++|++|..++++..+ ++|++
T Consensus 144 ~~~~~~~~l~~~i~-----~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~---~~d~~ 215 (403)
T TIGR01979 144 DGTLDLDDLEKLLT-----EKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQAL---DCDFY 215 (403)
T ss_pred CCCCCHHHHHHHhc-----cCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcccc---CCCEE
Confidence 88999999999997 58999999999999999999999999999999999999999999999988876 89999
Q ss_pred EEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHH
Q 043646 293 FLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVK 372 (625)
Q Consensus 293 ~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~ 372 (625)
++|+||++| |.|+|++++++++ ++.+.|...||++..... + . ...+.....+++.||+++..++.....+...
T Consensus 216 ~~s~~K~~g-p~G~g~l~~~~~~--~~~~~~~~~g~~~~~~~~-~--~-~~~~~~~~~~~~~gt~~~~~~~al~~al~~~ 288 (403)
T TIGR01979 216 VFSGHKMYG-PTGIGVLYGKEEL--LEQMPPFLGGGEMIAEVS-F--E-ETTYNEAPHKFEAGTPNIAGVIGLGAAIDYL 288 (403)
T ss_pred EEecccccC-CCCceEEEEchHH--HhcCCCeecCCCceeecc-c--C-ccccCCChhhcCCCCccHHHHHHHHHHHHHH
Confidence 999999875 8889999999887 456667666665543221 1 1 1112233567889999988776443333222
Q ss_pred hhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCC-CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhc
Q 043646 373 EYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTS-VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLF 451 (625)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~ 451 (625)
...|.+.+.++...+++++++.|.++++++++++.+ ..+.++++|.+.. ++..++.+.| +++
T Consensus 289 ~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~----------------~~~~~~~~~L-~~~ 351 (403)
T TIGR01979 289 EAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEG----------------VHPHDVGTIL-DEE 351 (403)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCC----------------cCHHHHHHHH-hhC
Confidence 567899999999999999999999999999998753 2467888887632 2356788877 458
Q ss_pred CeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 452 GIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 452 gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
||.++.|++|..+.... .+ .++++|||+++|+|++|+++++++|+++++.
T Consensus 352 gI~v~~g~~~~~~~~~~-~~--------------------~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 352 GIAVRSGHHCAQPLMRR-FG--------------------VPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred CEEEcchhhhhHHHHHH-hC--------------------CCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 99999999997543211 11 2489999999999999999999999987664
No 9
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=2.5e-43 Score=376.36 Aligned_cols=364 Identities=29% Similarity=0.454 Sum_probs=297.3
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
+|||+++.++.|+.|++++.+++..++.||+...+..+....++++++++.+++++|++++++|+|+ +|++.+++.++.
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~-~~~t~a~~~~~~ 79 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFT-SNGTEALNAVAS 79 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEE-SSHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccc-cccchhhhhhhh
Confidence 7999999999999999999999988899997766777888899999999999999999984489999 566668999988
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH----HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.+.. .+++|++ |+++..+|+++..+|. ..|++++.++.+.++.+|+++++++|+ +++
T Consensus 80 ~l~~------------~~~~g~~--vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-----~~~ 140 (371)
T PF00266_consen 80 SLLN------------PLKPGDE--VLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-----PDT 140 (371)
T ss_dssp HHHH------------HGTTTCE--EEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-----TTE
T ss_pred cccc------------ccccccc--cccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-----ccc
Confidence 8731 1467885 9999999999996665 358999999998889999999999998 689
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
++|++++++|.||.+.|+++|+++||++|+++++|++|++|..++|++.+ ++|++++|+|| |+||.|+|+|+++++
T Consensus 141 ~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~~ 216 (371)
T PF00266_consen 141 RLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRPE 216 (371)
T ss_dssp SEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEHH
T ss_pred ceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehhh
Confidence 99999999999999999999999999999999999999999999999988 89999999999 788999999999998
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~ 392 (625)
. ...++|...||+...... .....+.....+++.||+++..+++ .+++++ +..|++++.+|...+++++.
T Consensus 217 ~--~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~~~ 288 (371)
T PF00266_consen 217 A--IERLRPAKPGGGYLDFPS----LQEYGLADDARRFEGGTPNVPAIYALNEALKLL--EEIGIERIRERIRELAEYLR 288 (371)
T ss_dssp H--HHHHHTSSSSSSTTTHHH----HHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred h--hhcccccccccccccccc----chhcccccccccccccceeeehhhhHHHHHhhh--hccccccchhhhhhHHHHHH
Confidence 8 445667776665421110 0011123445678899999988764 455555 67899999999999999999
Q ss_pred HhhCCCCcEEEeCCCC-CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhc
Q 043646 393 GRILPNQNIQVLGNTS-VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLA 471 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~ 471 (625)
+.|.++++++++++.. ..+.++++|.+.. ++..++.+.|.++ ||.++.|+.|+.+ ....++
T Consensus 289 ~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~----------------~~~~~~~~~L~~~-~I~~~~G~~~~~~-~~~~~~ 350 (371)
T PF00266_consen 289 EALEELPGIEVLGPDDEPRRPSIVSFNLPG----------------SDADDVVKYLEER-GIAVSTGSACAGP-SLDILG 350 (371)
T ss_dssp HHHHHTTTEEESSSSCGGBGTTEEEEEETT----------------SSHHHHHHHHHHH-TEEEEESTTTCHH-HHHHHH
T ss_pred hhhhcCCceeEeeecccccccceEEEeecC----------------CCHHHHHHHHhhc-CEEEeccCcccHH-HHHHhC
Confidence 9999999999988533 5688899998832 3578999999775 9999999999844 333344
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFI 512 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~l 512 (625)
+ .+.+|||+++|+|++|||+|
T Consensus 351 ~--------------------~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 351 M--------------------GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp T--------------------TTEEEEE-GTTSSHHHHHHH
T ss_pred C--------------------CCEEEEeccCCCCHHHHhhC
Confidence 3 38999999999999999986
No 10
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=3e-42 Score=366.93 Aligned_cols=353 Identities=21% Similarity=0.263 Sum_probs=285.2
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
+|||+++.++.|+.|.+++.+++...++||+...+..+..+.+.++++++.+++++|++++ +|+|| +|++++++.++.
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t-~~~t~a~~~~l~ 78 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFT-SGATESNNLAIK 78 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHHH
Confidence 5999999999999999999998877788988644555667788999999999999999876 89999 566776666554
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH---HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR---QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
.+... .+++|++ |+++..+|+++...|. ..|++++.++++.++.+|+++|+++++ ++++
T Consensus 79 ~~~~~-----------~~~~g~~--vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----~~t~ 140 (364)
T PLN02651 79 GVMHF-----------YKDKKKH--VITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-----PDTA 140 (364)
T ss_pred HHHHh-----------ccCCCCE--EEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-----CCcE
Confidence 43100 1356774 9999999999877765 358999999998888999999999997 5799
Q ss_pred EEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
+|++++++|+||.+.|+++|+++||++|+++++|++|++|..++|+..+ ++|++++|+||| +||.|+|+++++++.
T Consensus 141 lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~~ 216 (364)
T PLN02651 141 LVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRRP 216 (364)
T ss_pred EEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999988 899999999998 679999999999987
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALG 393 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~ 393 (625)
+..+.|...||+. +.+++.||+++.+++ .++++++. . +.+.+.+|.+.+++++++
T Consensus 217 --~~~l~p~~~g~~~------------------~~~~~~GT~~~~~~~~l~~al~~~~--~-~~~~i~~~~~~l~~~l~~ 273 (364)
T PLN02651 217 --RVRLEPLMSGGGQ------------------ERGRRSGTENTPLVVGLGAACELAM--K-EMDYDEKHMKALRERLLN 273 (364)
T ss_pred --CCCCCccccCCCc------------------cCCccCCCccHHHHHHHHHHHHHHH--H-hHHHHHHHHHHHHHHHHH
Confidence 5567777776654 345678999988875 46677763 2 458999999999999999
Q ss_pred hhCC-CCcEEEeCCCC-CCC-cceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh---hH
Q 043646 394 RILP-NQNIQVLGNTS-VKR-QAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY---GH 467 (625)
Q Consensus 394 ~L~~-l~gv~v~~~~~-~~~-~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~---~~ 467 (625)
.|.+ +++++++++.+ ..+ .++++|.+. + +++.++++.|.+ |.++.|++|+.+. ++
T Consensus 274 ~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~-~---------------~~~~~~~~~L~~---i~v~~g~~c~~~~~~~~~ 334 (364)
T PLN02651 274 GLRAKLGGVRVNGPRDPEKRYPGTLNLSFA-Y---------------VEGESLLMGLKE---VAVSSGSACTSASLEPSY 334 (364)
T ss_pred HHHhhCCCEEEECCCCcccCcCCEEEEEeC-C---------------CCHHHHHHHhCC---EEEEchhhcCCCCCCcCH
Confidence 9985 78999999743 233 558888873 2 346788888832 9999999998652 23
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
.+..++..... ..+.+|+|+++|||++|||
T Consensus 335 ~~~~~g~~~~~-------------~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 335 VLRALGVPEEM-------------AHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred HHHHcCCChHH-------------hCceEEEEcCCCCCHHHcC
Confidence 33333321111 2489999999999999985
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=1.2e-41 Score=364.62 Aligned_cols=365 Identities=22% Similarity=0.297 Sum_probs=289.9
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
+|||++++++.|+.|.+++.+++...++||+.. +..+..+.+.++++|+++++++|++++ +|+|| +|++.+++.++.
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t-~~~t~a~~~al~ 77 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSSM-HSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFT-SGGTESDNTAIK 77 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcc-cHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CcHHHHHHHHHH
Confidence 599999999999999999999887777888863 455667788899999999999999866 89998 677777777666
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
.+.. ..++++ +|+++..+|+++...|.. .|++++.++++.++.+|+++++++++ ++++
T Consensus 78 ~~~~------------~~~~~~--~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-----~~~~ 138 (379)
T TIGR03402 78 SALA------------AQPEKR--HIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-----DDTA 138 (379)
T ss_pred HHHH------------hcCCCC--eEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-----CCcE
Confidence 5410 013344 599999999998766643 59999999998888899999999997 5799
Q ss_pred EEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
++++++++|+||.+.|+++|+++||++|+++++|++|++|..++|+..+ ++|++++|+||+ ++|.|+|+++++++.
T Consensus 139 lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K~-~gp~G~g~l~v~~~~ 214 (379)
T TIGR03402 139 LVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHKL-HGPKGVGALYIRKGT 214 (379)
T ss_pred EEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHHc-CCCCceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999887 899999999995 569999999998875
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESALG 393 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~~ 393 (625)
.+.|...|++. ..+++.||+++.++++ +++++.. .+++.+.++.+.+++++++
T Consensus 215 ----~~~p~~~g~~~------------------~~~~~~gt~~~~~~~~l~~al~~~~---~~~~~~~~~~~~l~~~l~~ 269 (379)
T TIGR03402 215 ----RFRPLLRGGHQ------------------ERGRRAGTENVPGIVGLGKAAELAT---EHLEEENTRVRALRDRLEA 269 (379)
T ss_pred ----CCCCcccCCcc------------------CCCcCCCCccHHHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHH
Confidence 24565555432 2345679998888764 4555552 2467888999999999999
Q ss_pred hhCC-CCcEEEeCCCCCCCc-ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh---Hh
Q 043646 394 RILP-NQNIQVLGNTSVKRQ-AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG---HT 468 (625)
Q Consensus 394 ~L~~-l~gv~v~~~~~~~~~-~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~---~~ 468 (625)
.|.+ ++++++.++.. .+. ++++|.+.. +++.++...| +++||.+++|++|+.+.. +.
T Consensus 270 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~ 331 (379)
T TIGR03402 270 GLLARIPDARLNGDPT-KRLPNTVNISFEY----------------IEGEAILLLL-DMEGICASSGSACTSGSLEPSHV 331 (379)
T ss_pred HHHhhCCCEEEeCCCc-cCCCCEEEEEecC----------------CCHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHH
Confidence 9985 89999988643 343 477776632 2466888888 558999999999986532 22
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
+..++.+... .++.+|+|+++|+|++|||+++++|++++++...
T Consensus 332 ~~~lg~~~~~-------------~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 332 LRAMGVPHTA-------------AHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred HHHcCCChhh-------------cCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2223211111 2589999999999999999999999999877543
No 12
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=1e-40 Score=357.63 Aligned_cols=370 Identities=17% Similarity=0.236 Sum_probs=286.7
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
+|||++++++.++.|++++.+++...++||+. .+.++.......+++++.+++.+|+.+.++|+|| +|++++++.++.
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t-~g~teal~~~~~ 78 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNS-LHQFGTATHPAIAEALDKLYKGINARDLDDIIIT-SCATESNNWVLK 78 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCcc-ccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEe-CCHHHHHHHHHH
Confidence 59999999999999999999999888899986 3555666677788888888888887433489998 788998998877
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH---HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR---QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
++... . .+++++. .|+++..+|+++...+. ..|++++.+|+++++.+|+++|+++++ ++++
T Consensus 79 ~~~~~-------~---~~~~~~~-~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-----~~t~ 142 (382)
T TIGR03403 79 GVYFD-------E---ILKGGKN-HIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-----EKTA 142 (382)
T ss_pred HHHHh-------h---cccCCCC-EEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-----cCCe
Confidence 65210 0 0134322 59999999999987754 469999999998888999999999987 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
++++++++|+||.+.|+++|.++|+++|+++++|++++.|..++++..+ ++|++++|+|||+| |.|+|++++++..
T Consensus 143 lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~g-p~G~g~l~vr~~~ 218 (382)
T TIGR03403 143 LVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKA---GVDFLSFSAHKFHG-PKGVGGLYIRKGV 218 (382)
T ss_pred EEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCcccc---CCCEEEEcchhhCC-CCceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999998876 89999999999865 8889999999875
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhh
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L 395 (625)
.+.|...|++. ..+++.||+++.+++.++.++.... .+++.+.++.+.+++++.+.|
T Consensus 219 ----~~~p~~~g~~~------------------~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L 275 (382)
T TIGR03403 219 ----ELTPLFHGGEH------------------MGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDAL 275 (382)
T ss_pred ----CCCCcccCCCC------------------CCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHH
Confidence 24455444432 1234569999888764433332212 247788899999999999999
Q ss_pred CCCCcEEEeCCCCCCCcc-eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh---hHhhhc
Q 043646 396 LPNQNIQVLGNTSVKRQA-ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY---GHTLLA 471 (625)
Q Consensus 396 ~~l~gv~v~~~~~~~~~~-i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~---~~~~l~ 471 (625)
.++++++++++.+ .+.+ +++|.+ ++ ++...+...| +++||.++.|++|+... .+.+..
T Consensus 276 ~~~~~~~~~~~~~-~~~~~~~~~~~-~~---------------~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~ 337 (382)
T TIGR03403 276 LELPDVFVVGDRE-HRVPNTILISI-KG---------------VEGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVA 337 (382)
T ss_pred hcCCCEEEECCCC-CCcCCEEEEEe-CC---------------CCHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHH
Confidence 9999999998743 3544 556654 22 3466788887 45799999999997431 122222
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
++.+.. ...+.+|+|+++++|++|||+++++|++++++..
T Consensus 338 ~g~~~~-------------~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 338 IGADKE-------------LAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred cCCChH-------------HhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 221110 0247899999999999999999999999887643
No 13
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=9.2e-41 Score=360.11 Aligned_cols=364 Identities=19% Similarity=0.234 Sum_probs=287.1
Q ss_pred eEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
.+|||+++.++.|+.|.+++.+++...++||+...+..+....+.++++|+.+++++|++++ +|+|+ +|++++++.++
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~-~g~t~a~~~~l 81 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFT-SGATESNNLAI 81 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHH
Confidence 58999999999999999999888866678887543434555667899999999999999876 89998 67888788776
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH---HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR---QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~---~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++... ..++|++ |+++..+|+++..+|+ ..|++++.+++++++.+|+++|+++++ +++
T Consensus 82 ~~l~~~-----------~~~~g~~--Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-----~~~ 143 (402)
T TIGR02006 82 KGIAHF-----------YKSKGNH--IITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-----DDT 143 (402)
T ss_pred HHHHHh-----------hcCCCCE--EEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-----CCC
Confidence 654200 0246664 9999999999987764 359999999998888999999999987 578
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
++|++++++|+||.+.|+++|+++||++|+++++|++|++|+.++++..+ ++|++++|+||++| |.|+|+++++++
T Consensus 144 ~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~---~~D~~~~s~~K~~g-p~G~G~l~~~~~ 219 (402)
T TIGR02006 144 ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNEL---KVDLMSISGHKIYG-PKGIGALYVRRK 219 (402)
T ss_pred EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcccc---CCCEEEEehhhhcC-CCceEEEEEccC
Confidence 99999999999999999999999999999999999999999999999876 89999999999865 989999999987
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~ 392 (625)
. ...+.|...|++. ..+++.||+++.+++. ++++++ . .+++.+.++.+.++++++
T Consensus 220 ~--~~~~~~~~~g~~~------------------~~~~~~gt~~~~~~~al~~al~~~--~-~~~~~~~~~~~~l~~~l~ 276 (402)
T TIGR02006 220 P--RVRLEALIHGGGH------------------ERGMRSGTLPTHQIVGMGEAFRIA--K-EEMAQDTAHVLALRDRLL 276 (402)
T ss_pred C--CCCCCceecCCCc------------------cCCccCCCccHHHHHHHHHHHHHH--H-HhHHHHHHHHHHHHHHHH
Confidence 6 3345555555443 3457789999887754 445554 2 368888999999999999
Q ss_pred HhhCCCCcEEEeCCCCCCCcc---eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh----
Q 043646 393 GRILPNQNIQVLGNTSVKRQA---ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY---- 465 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~~~~~---i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~---- 465 (625)
+.|+++++++++++. ..+.+ +++|... +..++...| .+|.++.|++|+...
T Consensus 277 ~~l~~~~~v~~~~~~-~~~~p~~~~v~f~~~------------------~~~~~~~~l---~~i~v~~G~~c~~~~~~~~ 334 (402)
T TIGR02006 277 NGIKSIEEVYLNGDL-EHRVPGNLNVSFNYV------------------EGESLIMAL---KDLAVSSGSACTSASLEPS 334 (402)
T ss_pred HHHhcCCCEEEeCCc-cccCCCeEEEEEeCc------------------CHHHHHHhc---CCEEEechhhcCCCCCCcc
Confidence 999999999998764 33444 3444321 244566555 489999999997521
Q ss_pred -hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 466 -GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 466 -~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
....+++.. .. ..+++|+|+++++|++|||+++++|+++++....
T Consensus 335 ~~l~~lg~~~--~~-------------~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 335 YVLRALGIND--EL-------------AHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred HHHHHcCCCh--hh-------------cCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112222221 11 2589999999999999999999999999887654
No 14
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-42 Score=350.37 Aligned_cols=376 Identities=23% Similarity=0.324 Sum_probs=294.1
Q ss_pred CceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 76 RRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 76 ~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
.+.+|||+++++|.++.|++++.+++..+++|||.. .+++.....++++|+.+|+++|+++.+ |+|| +|+|+++++
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~d-IiFt-s~ATEs~Nl 117 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSD-IVFT-SGATESNNL 117 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCc-EEEe-CCchHHHHH
Confidence 368999999999999999999999999999999986 356677777999999999999999985 9999 789999999
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~ 232 (625)
++..+.+.. ..+.+.+||+...+|+++..+|+. .|++|+++|++.++.+|++.+++.|+ +
T Consensus 118 vl~~v~~~~------------~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-----~ 180 (428)
T KOG1549|consen 118 VLKGVARFF------------GDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-----S 180 (428)
T ss_pred HHHHhhccc------------cccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-----C
Confidence 998885321 112333799999999999988865 59999999999889999999999999 7
Q ss_pred CCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEe
Q 043646 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLIS 312 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~ 312 (625)
+|++|.+.+++|.+|++.|+++|+++|+++|+++++|+||++|.+++|++++ ++|+++++.|||+|.|+ +|+||++
T Consensus 181 ~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~ygp~~-iGaLYvr 256 (428)
T KOG1549|consen 181 KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIYGPPG-IGALYVR 256 (428)
T ss_pred CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---CchheeeecccccCCCc-ceEEEEc
Confidence 9999999999999999999999999999999999999999999999999999 99999999999998555 9999999
Q ss_pred ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
+..-++ ...|.+.|||. ++.++.||.+....+ .+|.++..++..+.+.+..+ +...
T Consensus 257 ~~~~~~-~~~p~~~GGgq------------------~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~~~ 314 (428)
T KOG1549|consen 257 RKRPRL-RVEPPLSGGGQ------------------ERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LSEK 314 (428)
T ss_pred cCCCcc-cccCcccCCcc------------------ccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHH---HHHH
Confidence 733212 24577777777 677889997665543 56677775554455554443 4445
Q ss_pred HHHhh-CCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch---hh
Q 043646 391 ALGRI-LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP---YG 466 (625)
Q Consensus 391 l~~~L-~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~---~~ 466 (625)
+...+ ..++.+.+.++......+.++|.+... .+.-+.. +...+.++.|.+|... ..
T Consensus 315 ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~----------------~g~~~~~---~~~~~~l~s~~a~~~~~~eps 375 (428)
T KOG1549|consen 315 LLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYV----------------EGESLLM---DLKDVALSSGSACTSASLEPS 375 (428)
T ss_pred HHHHHhhhCchhhccCCcccccccceeeecccc----------------cCcchhh---hhhhhhhcccchhhcCCCCcc
Confidence 55554 446777777775444445555554311 1112222 3346788888888632 12
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcccCc
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLY 530 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~~~~~y 530 (625)
..+...+.+... ....||||++.|++++|++++++.+++.+.....+-|++
T Consensus 376 y~l~~~G~~~~~-------------~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~ 426 (428)
T KOG1549|consen 376 YVLRAIGVDEDL-------------AHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLW 426 (428)
T ss_pred hhhhhcCcchhh-------------hcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCC
Confidence 222333332222 368899999999999999999999999999888877776
No 15
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=2.1e-39 Score=346.74 Aligned_cols=367 Identities=23% Similarity=0.331 Sum_probs=289.2
Q ss_pred EeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 79 TYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 79 ~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
+|||+++++ +.|+.+.+++.+.+.....+++...+..........+++++.+++++|++..++|+|| +|+++++..++
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~g~t~al~~~~ 79 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFT-NNATTALNIAL 79 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEe-CCHHHHHHHHH
Confidence 599999877 6889999999888876545665443434445567889999999999999755579998 67788888877
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH----HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCC
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~ 233 (625)
.++ +++||+ |+++..+|+++..+|. ..|++++.++.+.++.+|+++|+++++ ++
T Consensus 80 ~~~---------------~~~gd~--vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----~~ 137 (376)
T TIGR01977 80 KGL---------------LKEGDH--VITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-----TN 137 (376)
T ss_pred Hhc---------------cCCCCE--EEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-----CC
Confidence 765 577885 9999999999876553 349999999988888899999999997 57
Q ss_pred CeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEec
Q 043646 234 PMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK 313 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~ 313 (625)
+++|++++++|+||.+.|+++|.++||++|+++++|+||++|..++++..+ ++|++++|+|||+++|.|+|++++++
T Consensus 138 ~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~g~g~l~~~~ 214 (376)
T TIGR01977 138 TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTEL---AIDMLAFTGHKGLLGPQGTGGLYIRE 214 (376)
T ss_pred CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhc---CCCEEEecccccccCCCCceEEEEcC
Confidence 999999999999999999999999999999999999999999999998876 89999999999999999999999988
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESA 391 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l 391 (625)
+. .+.+...++... +...+ ........+++.||+++..++ .++++++ ...|.+.+.+|.+.+++++
T Consensus 215 ~~----~~~~~~~~~~~~-~~~~~-----~~~~~~~~r~~~~t~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~l~~~~ 282 (376)
T TIGR01977 215 GI----KLKPLKSGGTGS-HSALI-----DQPSELPDRFESGTLNTPGIAGLNAGIKFI--EKIGIANIAKKECMLTEKL 282 (376)
T ss_pred Cc----CcCceecCCCcc-ccccc-----cccccchhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHH
Confidence 76 134444433221 10000 111223567888998887664 3556665 5679999999999999999
Q ss_pred HHhhCCCCcEEEeCCCC-CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 392 LGRILPNQNIQVLGNTS-VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 392 ~~~L~~l~gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
.+.|.++++++++++.+ ..+.++++|.+.. ++..++.+.|.+++||.++.|.+|+... +..+
T Consensus 283 ~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~----------------~~~~~~~~~L~~~~gi~v~~g~~~~~~~-~~~~ 345 (376)
T TIGR01977 283 LNGLREINKVKIYGPADPANRVGVVSFTVEG----------------IDSEEVADILDEKFDIATRTGLHCAPLA-HKTI 345 (376)
T ss_pred HHHHhcCCCeEEeCCCCccccCCeEEEEECC----------------CCHHHHHHHHhccCCEEEEcccccchHH-HHHh
Confidence 99999899999988643 3467888887732 2467899999776799999999887321 1111
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
+ ..+.+.+||+++.++|++|+++++++|++
T Consensus 346 g------------------~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 346 G------------------TFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred C------------------CCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 1 11358999999999999999999999985
No 16
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.4e-38 Score=343.50 Aligned_cols=370 Identities=19% Similarity=0.238 Sum_probs=284.8
Q ss_pred eEeccCCCCCcchHHHHHHHHHhhC--CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNVL--PFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l~--~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
.+|||+++.++.|+.|.+++.+++. ..++|++...+..+....+.++++++.+++++|++++ +++|+ +|+|++++.
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~-~g~t~al~~ 81 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFT-SGATESDNL 81 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEe-CCHHHHHHH
Confidence 5899999999999999999999886 5678887643334444567889999999999999876 79998 677777887
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~ 232 (625)
++.++... .+++||+ |++++.+|+++..+|+. .|++++.++.++++.+|+++|+++|+ +
T Consensus 82 ~l~~l~~~-----------~~~~gd~--Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-----~ 143 (404)
T PRK14012 82 AIKGAAHF-----------YQKKGKH--IITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-----D 143 (404)
T ss_pred HHHHHHHh-----------hcCCCCE--EEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-----C
Confidence 76655200 0356775 99999999999877754 49999999998888999999999997 5
Q ss_pred CCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEe
Q 043646 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLIS 312 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~ 312 (625)
++++|++++++|+||.+.|+++|.++||++|+++++|+||++|..++++..+ ++|++++|+||++| |.|+|+++++
T Consensus 144 ~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~g-p~g~G~l~~~ 219 (404)
T PRK14012 144 DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKL---KVDLMSFSAHKIYG-PKGIGALYVR 219 (404)
T ss_pred CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccC---CCCEEEEehhhccC-CCceEEEEEe
Confidence 7999999999999999999999999999999999999999999999988876 89999999999765 8889999999
Q ss_pred ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
++. ...+.|...|++. ..+++.||+++..++. +++.+. ..+.+.+.++.+.++++
T Consensus 220 ~~~--~~~~~~~~~g~~~------------------~~~~~~gt~~~~~~~~l~~al~~~---~~~~~~~~~~~~~l~~~ 276 (404)
T PRK14012 220 RKP--RVRLEAQMHGGGH------------------ERGMRSGTLPTHQIVGMGEAARIA---KEEMATENERIRALRDR 276 (404)
T ss_pred cCC--CCCCCceecCCCc------------------cCCccCCCcCHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHH
Confidence 876 3345565555543 2346678887766653 444443 23466788899999999
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcc---eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh--
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQA---ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY-- 465 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~---i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~-- 465 (625)
+.+.|+++++++++++.. .+.+ +++|...+ ..++...| .++.+++|++|....
T Consensus 277 l~~~L~~~~~i~~~~~~~-~~~~~~~~~~~~~~~------------------~~~~~~~l---~~~~i~~g~~~~~~~~~ 334 (404)
T PRK14012 277 LWNGIKDIEEVYLNGDLE-QRVPGNLNVSFNYVE------------------GESLIMAL---KDLAVSSGSACTSASLE 334 (404)
T ss_pred HHHHHhcCCCEEEeCCcc-ccCCCEEEEEEeCcC------------------HHHHHHhC---CCeEEEchhhhCCCCCC
Confidence 999999999998876432 2322 34443321 34566666 378899999887421
Q ss_pred ---hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcccCcc
Q 043646 466 ---GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLYH 531 (625)
Q Consensus 466 ---~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~~~~~y~ 531 (625)
....+++. +.+..+.||||+++++|++|+|+++++|++++++.+++.++|.
T Consensus 335 ~~~~~~~~~~~---------------~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~~~~~~ 388 (404)
T PRK14012 335 PSYVLRALGLN---------------DELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRELSPLWE 388 (404)
T ss_pred CCHHHHHcCCC---------------hhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 11111211 1113589999999999999999999999999988766555553
No 17
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.6e-38 Score=340.60 Aligned_cols=369 Identities=18% Similarity=0.210 Sum_probs=281.5
Q ss_pred eEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
.+|||++++++.|+.|.+++.+++...++|++.. +..+....+.++++|+.+++++|++++ +|+|+ +|+++++..++
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~-~g~t~a~~~~~ 77 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNESSL-HDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFT-SGGTESNYLAI 77 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCccc-cHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CcHHHHHHHHH
Confidence 3799999999999999999999888788888753 556777788999999999999999776 89998 68788777766
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH---HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW---RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++... ..++|+ +|++++.+|+++...+ +..|++++.++++.++.+|+++|+++++ +++
T Consensus 78 ~~~~~~-----------~~~~g~--~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-----~~~ 139 (381)
T PRK02948 78 QSLLNA-----------LPQNKK--HIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-----PDT 139 (381)
T ss_pred HHHHHh-----------ccCCCC--EEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-----CCC
Confidence 655100 013566 4999999999987765 3469999999998888999999999987 578
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
++|++++++|+||.+.|+++|.++|+++|+++++|++|++|..++++..+ ++|++++|+||++| |.|+|+++++++
T Consensus 140 ~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~~g-p~G~G~l~~~~~ 215 (381)
T PRK02948 140 VLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKIYG-PKGVGAVYINPQ 215 (381)
T ss_pred EEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhcCC-CCcEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999988877 89999999999876 888999999887
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
. .+.+...++.. ..+++.||+++.+++++..++.... .+.+.+.++.+.+++++++.
T Consensus 216 ~----~~~~~~~~~~~------------------~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~ 272 (381)
T PRK02948 216 V----RWKPVFPGTTH------------------EKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQ 272 (381)
T ss_pred C----CCCCcccCCCC------------------CCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 5 12222222111 3456788988887764333332111 24678889999999999999
Q ss_pred hCCCCcEEEeCCC-CCCCcc-eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh---hHhh
Q 043646 395 ILPNQNIQVLGNT-SVKRQA-ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY---GHTL 469 (625)
Q Consensus 395 L~~l~gv~v~~~~-~~~~~~-i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~---~~~~ 469 (625)
|+++ ++++.... ...+.+ +++|.+.. +++.++...| +++||.++.|++|+.++ ++.+
T Consensus 273 L~~~-~~~v~~~~~~~~~~~~i~~~~~~~----------------~~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~ 334 (381)
T PRK02948 273 IQTL-PLPIEVEGHSTSCLPHIIGVTIKG----------------IEGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTM 334 (381)
T ss_pred HhcC-CCCEEEeCCCccCcCCEEEEEeCC----------------CCHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHH
Confidence 9987 44433211 122333 56666532 2356777777 56899999999997532 2333
Q ss_pred hcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 470 LAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 470 l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
..++..... ..+++|||+++++|++|+++++++|++++++..+
T Consensus 335 ~~~~~~~~~-------------~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 335 LAIGKTYEE-------------AKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred HHcCCChHH-------------hCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 233211000 1489999999999999999999999998876554
No 18
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=2.1e-38 Score=341.66 Aligned_cols=373 Identities=24% Similarity=0.290 Sum_probs=290.3
Q ss_pred HHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh
Q 043646 55 LAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL 134 (625)
Q Consensus 55 ~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~ 134 (625)
++.+|++|+..+ +...+|||+++.+++|+.+.+++.+.+.....+++.. +.......+..+++++.+++++
T Consensus 3 ~~~~r~~f~~~~--------~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ia~~~ 73 (397)
T TIGR01976 3 VEAVRGQFPALA--------DGDRVFFDNPAGTQIPQSVADAVSAALTRSNANRGGA-YESSRRADQVVDDAREAVADLL 73 (397)
T ss_pred hhHHHhhCCcCC--------CCCeEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCC-chHHHHHHHHHHHHHHHHHHHc
Confidence 456888887651 1126999999999999999999999886655565542 4444556778899999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH----HHcCCeEEEEec
Q 043646 135 GGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW----RQSLAEVVEIGL 210 (625)
Q Consensus 135 g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~ 210 (625)
|++++ +|+++ +|++.+++.+..++.. .+++||+ |++++.+|+++...| +..|++++.+++
T Consensus 74 ~~~~~-~v~~~-~~~t~~l~~~~~~~~~------------~~~~gd~--vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~ 137 (397)
T TIGR01976 74 NADPP-EVVFG-ANATSLTFLLSRAISR------------RWGPGDE--VIVTRLDHEANISPWLQAAERAGAKVKWARV 137 (397)
T ss_pred CCCCC-eEEEe-CCHHHHHHHHHHHHHh------------cCCCCCE--EEEcCCchHhHHHHHHHHHHhcCCEEEEEec
Confidence 99876 78888 6888888877766521 1468885 999999999987665 346999999998
Q ss_pred CC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCC
Q 043646 211 DD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGY 289 (625)
Q Consensus 211 ~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~ 289 (625)
+. ++.+|+++++++++ +++++|++++++|+||.+.|+++|+++||++|+++++|++|+.|..++++.++ ++
T Consensus 138 ~~~~~~~~~~~l~~~i~-----~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~ 209 (397)
T TIGR01976 138 DEATGELHPDDLASLLS-----PRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQAT---GA 209 (397)
T ss_pred cccCCCcCHHHHHHhcC-----CCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHc---CC
Confidence 86 68899999999997 57999999999999999999999999999999999999999999888888776 89
Q ss_pred cEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHH
Q 043646 290 DAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAAL 367 (625)
Q Consensus 290 D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal 367 (625)
|++++|+|||+| |. +|++++++++ ++.+.+....+ .+.....+++.||+++..++ .+++
T Consensus 210 d~~~~s~~K~~g-~~-~G~l~~~~~~--~~~l~~~~~~~---------------~~~~~~~~~~~gt~~~~~~~~l~~al 270 (397)
T TIGR01976 210 DFLTCSAYKFFG-PH-MGILWGRPEL--LMNLPPYKLTF---------------SYDTGPERFELGTPQYELLAGVVAAV 270 (397)
T ss_pred CEEEEechhhcC-Cc-eEEEEEcHHH--HhhCCCccccC---------------ccCCCcchhcCCCCCHHHHHHHHHHH
Confidence 999999999986 65 7999999887 44454433211 01122467889999987664 4566
Q ss_pred HHHHHhhcC--------------HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCC-CCCcceEEEEeccCCCCCCccccc
Q 043646 368 AFWVKEYIG--------------YEVIKKQEDVYIESALGRILPNQNIQVLGNTS-VKRQAILSFLVYSTTNSSPENMKI 432 (625)
Q Consensus 368 ~~~~~~~~g--------------~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~~ 432 (625)
+++. ..| ++.+.++...+++++++.|.++++++++++.+ ..+.++++|.+..
T Consensus 271 ~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 337 (397)
T TIGR01976 271 DYLA--GLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHG----------- 337 (397)
T ss_pred HHHH--HhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCC-----------
Confidence 6652 333 67788899999999999999998899987632 3467888776632
Q ss_pred cCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 043646 433 ERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFI 512 (625)
Q Consensus 433 ~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~l 512 (625)
.+..++.+.|.+ +||.++.|++|..+. ...+++.. +.+++|||+++++|++|++++
T Consensus 338 -----~~~~~l~~~L~~-~gI~v~~~~~~~~~~-~~~~~~~~-----------------~~~~iRis~~~~~t~~di~~l 393 (397)
T TIGR01976 338 -----LPPQRVVRRLAD-QGIDAWAGHFYAVRL-LRRLGLND-----------------EGGVVRVGLAHYNTAEEVDRL 393 (397)
T ss_pred -----cCHHHHHHHHHH-CCeEEEeCccchHHH-HHHhCCCC-----------------CCCeEEEEeeccCCHHHHHHH
Confidence 235678888854 799999999987433 22222210 247899999999999999999
Q ss_pred HHHH
Q 043646 513 LAAL 516 (625)
Q Consensus 513 l~aL 516 (625)
+++|
T Consensus 394 ~~~l 397 (397)
T TIGR01976 394 LEAL 397 (397)
T ss_pred HHhC
Confidence 9875
No 19
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.5e-37 Score=332.16 Aligned_cols=367 Identities=29% Similarity=0.449 Sum_probs=289.8
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
+|||+++.+++|+.+++++.+.+...+.||+.+.+..+....+.+.++++.+++++|++.++++++| +|++.+++.++.
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~g~t~a~~~~~~ 79 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFT-RNTTEAINLVAY 79 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEe-CCHHHHHHHHHH
Confidence 5999999999999999999999888888988765667778889999999999999999834488998 678888888888
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
++... ..+|++ |+++..+|++....+ +..|++++.|+.+.++.+|+++|++++. +++
T Consensus 80 ~l~~~------------~~~g~~--vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-----~~~ 140 (373)
T cd06453 80 GLGRA------------NKPGDE--IVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLT-----ERT 140 (373)
T ss_pred Hhhhc------------CCCCCE--EEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhc-----CCc
Confidence 77310 016775 999999999975443 3569999999998888899999999997 579
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
++|++++++|+||.+.|+++|.++|+++|+++++|++++.+..++++..+ ++|++++|+|||+++ .|+|+++++++
T Consensus 141 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~~~-~g~g~~~~~~~ 216 (373)
T cd06453 141 KLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDL---GCDFLAFSGHKMLGP-TGIGVLYGKEE 216 (373)
T ss_pred eEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeecccc---CCCEEEeccccccCC-CCcEEEEEchH
Confidence 99999999999999999999999999999999999999999888888776 889999999999986 66899999988
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~ 392 (625)
. ++.+.+...||...... ...... +.....+++.||+++..++. ++++++ ...|.+.+.++.+++++++.
T Consensus 217 ~--~~~~~~~~~g~~~~~~~---~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~l~ 288 (373)
T cd06453 217 L--LEEMPPYGGGGEMIEEV---SFEETT-YADLPHKFEAGTPNIAGAIGLGAAIDYL--EKIGMEAIAAHEHELTAYAL 288 (373)
T ss_pred H--hhcCCCeecCCCccccc---cccccc-cCCCccccCCCCCCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHH
Confidence 7 45566655454432211 111111 12234567788998777653 445554 55688999999999999999
Q ss_pred HhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 393 GRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
+.|.++++++++.+. ..+.++++|.+. + ++..++.+.|.+ +||.+++|+.|..+.... .+
T Consensus 289 ~~l~~~~~~~~~~~~-~~~~~~~~~~~~-~---------------~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~-~~- 348 (373)
T cd06453 289 ERLSEIPGVRVYGDA-EDRAGVVSFNLE-G---------------IHPHDVATILDQ-YGIAVRAGHHCAQPLMRR-LG- 348 (373)
T ss_pred HHHhcCCCeEEeCCc-cccCCeEEEEEC-C---------------cCHHHHHHHHHH-CCEEeccCccchhHHHHH-hC-
Confidence 999999999988543 335677777652 1 235688888855 799999999887543221 11
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL 516 (625)
.++++|||+++++|++|+|+++++|
T Consensus 349 -------------------~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 349 -------------------VPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred -------------------CCCeEEEEecCCCCHHHHHHHHhhC
Confidence 2589999999999999999999875
No 20
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=8e-38 Score=337.65 Aligned_cols=384 Identities=16% Similarity=0.164 Sum_probs=279.7
Q ss_pred CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhh-HHHHHHHHHHH
Q 043646 49 KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVG-QRMTKMVHEAS 127 (625)
Q Consensus 49 ~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~-~~~~~~~~~~~ 127 (625)
.+.++.++.+|++|+.... . +.+..+|||+++.++.|+.|.+++.+++..+..+++.. +..+ .......++.+
T Consensus 4 ~~~~~~~~~~r~~f~~~~~---~--~~~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 77 (406)
T TIGR01814 4 LDEADPLRALRDEFHLPKI---G--DENAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRG-HNTGKAPWFTLDESLL 77 (406)
T ss_pred ccccChHHHHHHhcCCCcc---c--CCCCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhcc-CccCCCChhhhhhhhc
Confidence 4456778889999975410 0 01457999999999999999999988775432222221 1111 12223334343
Q ss_pred HHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCC-ceEEEEcCCCCchhHHHHH----HcC
Q 043646 128 NYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEE-RWVVFLGPYEHHSNLLSWR----QSL 202 (625)
Q Consensus 128 ~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~----~~G 202 (625)
+ + +++|++++ +|+|| +|+|++++.++..+ +++++ +.+|+++..+|+++..+|. ..|
T Consensus 78 ~-~-~l~g~~~~-~v~~~-~~~t~~l~~~~~~~---------------~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g 138 (406)
T TIGR01814 78 K-L-RLVGAKED-EVVVM-NTLTINLHLLLASF---------------YKPTPKRYKILLEAKAFPSDHYAIESQLQLHG 138 (406)
T ss_pred c-c-cccCCCCC-cEEEe-CCchHHHHHHHHHh---------------cCCcCCccEEEecCCCCChHHHHHHHHHHhcC
Confidence 3 5 89999876 89998 67889999988775 23432 2268889999999877664 458
Q ss_pred CeE----EEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc
Q 043646 203 AEV----VEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK 278 (625)
Q Consensus 203 ~~v----v~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~ 278 (625)
+++ +.++.+.++.+|++++++.++. ..++|++|++++++|.||.+.|+++|+++||++|+++++|++|++|..+
T Consensus 139 ~~~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~ 216 (406)
T TIGR01814 139 LTVEESMVQIEPREEETLRLEDILDTIEK--NGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP 216 (406)
T ss_pred CCcccceEEeccCCCCccCHHHHHHHHHh--cCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc
Confidence 887 4666666678899999998863 1257999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChh
Q 043646 279 INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358 (625)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~ 358 (625)
+|++.+ ++|++++|+|||+++|.| |+++++++. ...+.|...||........|.. ...+...+.+++.|||+
T Consensus 217 id~~~~---gvD~~~~s~hK~l~g~pG-~~l~v~~~~--~~~~~p~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~GT~~ 288 (406)
T TIGR01814 217 LDLHDW---GVDFACWCTYKYLNAGPG-AGAFVHEKH--AHTERPRLAGWWGHARPTRFKM--DNTLGLIPCGFRISNPP 288 (406)
T ss_pred cccccC---CCCEEEEcCccccCCCCC-eEEEEehhh--hhhcCCCCCcccCCCCcccccc--ccccCCCccceeeCCcc
Confidence 999887 899999999999976667 777776665 2335565555432111111110 01111224578899999
Q ss_pred HHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCC-CCCcceEEEEeccCCCCCCcccc
Q 043646 359 IVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTS-VKRQAILSFLVYSTTNSSPENMK 431 (625)
Q Consensus 359 ~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~ 431 (625)
+.+++. ++++++ ...|.+.+.++.+.+++++++.|.++ ++++++++.+ ..+.++++|.+. .
T Consensus 289 ~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~--------- 356 (406)
T TIGR01814 289 ILSVAALRGSLDIF--DQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V--------- 356 (406)
T ss_pred HHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C---------
Confidence 888754 556665 56799999999999999999999775 4699998743 346788888763 1
Q ss_pred ccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEec-CCCCCHHHHH
Q 043646 432 IERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITF-PYYMSNEEFE 510 (625)
Q Consensus 432 ~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~-~~~~t~edid 510 (625)
++.++.+.|. ++||.+... .++.+|||+ ++|+|++||+
T Consensus 357 -------~~~~~~~~L~-~~gi~v~~~---------------------------------~~~~iRiS~~~~~nt~~did 395 (406)
T TIGR01814 357 -------PGKAVFQALI-KRGVIGDKR---------------------------------EPSVIRVAPVPLYNTFVDVY 395 (406)
T ss_pred -------CHHHHHHHHH-HCCEEEecc---------------------------------CCCeEEEechhccCCHHHHH
Confidence 2567888885 469986411 137899999 6999999999
Q ss_pred HHHHHHHHHH
Q 043646 511 FILAALEFIA 520 (625)
Q Consensus 511 ~ll~aL~~~~ 520 (625)
+++++|++++
T Consensus 396 ~l~~~l~~~~ 405 (406)
T TIGR01814 396 DAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 21
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=1.7e-36 Score=321.61 Aligned_cols=345 Identities=20% Similarity=0.259 Sum_probs=269.4
Q ss_pred eccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 043646 80 YADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEV 159 (625)
Q Consensus 80 Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (625)
|||+++.+++|+.|.+++.+++...++||+...+..+....+.++++++++++++|++++ +|+|| +|++++++.++.+
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~-~g~t~a~~~~l~~ 78 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFT-SGATESNNLAILG 78 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHHHH
Confidence 899999999999999999998866678887644445666778899999999999999876 79998 6888878777665
Q ss_pred hcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeE
Q 043646 160 MGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPML 236 (625)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~l 236 (625)
+... ...+|+ .+|+++..+|+++...|+. .|++++.++++.++.+|+++|+++++ +++++
T Consensus 79 l~~~-----------~~~~g~-~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-----~~~~l 141 (353)
T TIGR03235 79 LARA-----------GEQKGK-KHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-----PDTLL 141 (353)
T ss_pred HHHh-----------cccCCC-CeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-----CCCEE
Confidence 5200 012442 2699999999999877643 59999999998888899999999987 57899
Q ss_pred EEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecccc
Q 043646 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALY 316 (625)
Q Consensus 237 v~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~ 316 (625)
|++++++|+||.+.|+++|+++|+++|+++++|++|++|..+++++.+ ++|++++|+|||+ +|.|+|+++++++..
T Consensus 142 v~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~-gp~g~g~l~~~~~~~ 217 (353)
T TIGR03235 142 VSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKIY-GPKGIGALVIRKRGK 217 (353)
T ss_pred EEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhcC-CCCceEEEEEccCcc
Confidence 999999999999999999999999999999999999999999999876 8999999999996 598999999998863
Q ss_pred ccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 317 QLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
....+.|...+++. ..+++.||+++..++ .++++++ ..+.+.+.++.+++++++++.
T Consensus 218 ~~~~~~~~~~~~~~------------------~~~~~~gt~~~~~~~al~~al~~~---~~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 218 PKAPLKPIMFGGGQ------------------ERGLRPGTLPVHLIVGMGEAAEIA---RRNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred cccccCceeeCCCC------------------cCccccCCCChHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHH
Confidence 21224555554432 356778998877665 4556654 247889999999999999999
Q ss_pred hCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh---hHhhhc
Q 043646 395 ILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY---GHTLLA 471 (625)
Q Consensus 395 L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~---~~~~l~ 471 (625)
|.+ +|++++++......++++|.+ ++ ++..++.+.|. + +|.+++|.+|+... .+.+..
T Consensus 277 l~~-~g~~~~~~~~~~~~~i~~~~~-~~---------------~~~~~v~~~L~-~-~i~v~~g~~~~~~~~~~~~~l~~ 337 (353)
T TIGR03235 277 LQT-LGVKLNGDPAETIPHILNFSI-DG---------------VNSEALIVNLR-A-DAAVSTGSACSSSKYEPSHVLQA 337 (353)
T ss_pred hcc-CCeEEeCCcccccCCEEEEEe-CC---------------cCHHHHHHHHh-C-CeEEEchhhcCCCCCCCCHHHHH
Confidence 988 799998764333456777765 22 34678888884 3 89999999997431 244445
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
++.+.... .+.+|||+
T Consensus 338 ~g~~~~~~-------------~~~~r~s~ 353 (353)
T TIGR03235 338 MGLDTDRA-------------RGAIRFSW 353 (353)
T ss_pred cCCCHHHh-------------CccEEEeC
Confidence 54433221 47899886
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=8.5e-34 Score=305.32 Aligned_cols=358 Identities=15% Similarity=0.042 Sum_probs=270.1
Q ss_pred eEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
..||...+-...++.|.+++...+. .| .+....++++++++++++++|++.++.+++++ ++++++..++
T Consensus 9 ~~~l~~pGP~~~~~~V~~a~~~~~~-----~~-----~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~-~gt~a~~~a~ 77 (401)
T PLN02409 9 RNHLFVPGPVNIPERVLRAMNRPNE-----DH-----RSPAFPALTKELLEDVKYIFKTKSGTPFIFPT-TGTGAWESAL 77 (401)
T ss_pred CceeccCCCCCCCHHHHHHhcCCCC-----CC-----CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeC-CcHHHHHHHH
Confidence 4477777778888899888855331 12 34567889999999999999998655678885 5566677666
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH--HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL--LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
..+ +++||+ |+++...|++.. ...+..|++++.++.+.++.+|+++++++++++. .++++
T Consensus 78 ~~~---------------~~~Gd~--Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~-~~~~k 139 (401)
T PLN02409 78 TNT---------------LSPGDK--VVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDT-NHKIK 139 (401)
T ss_pred Hhc---------------CCCCCE--EEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCc-CCCcc
Confidence 554 578986 888888888764 3345679999999988766689999999998410 02789
Q ss_pred EEEEecccCccccccCHHHHHHH--HHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEec
Q 043646 236 LGSFSACSNVTGIYSDTRSIARL--LHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK 313 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~l--a~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~ 313 (625)
+|+++|++|+||.+.|+++|+++ ||++|+++++|++|++|..++++..+ ++|++++|+||||++|.|+|++++++
T Consensus 140 ~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~ 216 (401)
T PLN02409 140 AVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASP 216 (401)
T ss_pred EEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECH
Confidence 99999999999999999999999 99999999999999999999999887 89999999999999999999999998
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhh-hhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE-RENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~-~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
+. ++.+.+........+ |. .+....+. .+..+||++..+. .++++++ ...|.+++.++.+.++++
T Consensus 217 ~~--~~~~~~~~~~~~~~~----~~----~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~ 284 (401)
T PLN02409 217 KA--LEASKTAKSPRVFFD----WA----DYLKFYKLGTYWPYTPSIQLLYGLRAALDLI--FEEGLENVIARHARLGEA 284 (401)
T ss_pred HH--HHHHhcCCCCCeecC----HH----HHHHHHhcCCCCCCCccHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHH
Confidence 87 333322111000000 00 00000011 1235688876654 5667766 467999999999999999
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
+++.|.++ |++++.+.+..+.+.+++...+. +++..++.+.|.+++||.+.+|....
T Consensus 285 l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~--------------~~~~~~l~~~l~~~~~i~i~~G~~~~-------- 341 (401)
T PLN02409 285 TRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPE--------------GIDSAEIVKNAWKKYNLSLGLGLNKV-------- 341 (401)
T ss_pred HHHHHHHc-CCeeccCChhhcccceEEEeCCC--------------CCCHHHHHHHHHHhCCEEEEcCCCcc--------
Confidence 99999887 89988764345666555444332 24567888888788999999875431
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
+.+.+||+...|++.+|+.+++++|++++.+.
T Consensus 342 ---------------------~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 342 ---------------------AGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred ---------------------cCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 35889999988999999999999999987663
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=5.6e-33 Score=294.97 Aligned_cols=345 Identities=15% Similarity=0.104 Sum_probs=256.5
Q ss_pred CCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 043646 84 TASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGIT 163 (625)
Q Consensus 84 ~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (625)
++..+.|+.|.+++.+.+.. ..+....+..+++++.+++++|+++++.+++++ |+++++..++.++
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~-~~t~al~~~~~~~--- 70 (356)
T cd06451 5 PGPSNVPPRVLKAMNRPMLG----------HRSPEFLALMDEILEGLRYVFQTENGLTFLLSG-SGTGAMEAALSNL--- 70 (356)
T ss_pred CCCcCCCHHHHHHhCCCccC----------CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEec-CcHHHHHHHHHHh---
Confidence 34456778888888543311 123445678899999999999996554677884 5566788887776
Q ss_pred ccchhhhhhhhccCCCCceEEEEcCCCCchh--HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEec
Q 043646 164 VPSIMRDKLITSLRDEERWVVFLGPYEHHSN--LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSA 241 (625)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~ 241 (625)
+.+|++ |+++...|++. ...++..|++++.++.+.++.+|++++++++++ .++++|++++
T Consensus 71 ------------~~~g~~--vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~----~~~~~v~i~~ 132 (356)
T cd06451 71 ------------LEPGDK--VLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQ----HDIKAVTLTH 132 (356)
T ss_pred ------------CCCCCE--EEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhc----cCCCEEEEec
Confidence 467885 88877777763 345667899999999987788999999999973 3789999999
Q ss_pred ccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCC
Q 043646 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSS 321 (625)
Q Consensus 242 ~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~ 321 (625)
++|+||.+.|+++|.++|+++|+++++|++|++|..++++... ++|+++.|+||||++|.|+|++++++++. +.+
T Consensus 133 ~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~---~~d~~~~s~~K~l~~p~g~G~l~~~~~~~--~~~ 207 (356)
T cd06451 133 NETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEW---GVDVAYTGSQKALGAPPGLGPIAFSERAL--ERI 207 (356)
T ss_pred cCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcccccccc---CccEEEecCchhccCCCCcceeEECHHHH--HHH
Confidence 9999999999999999999999999999999998888877665 78999999999999999999999998873 222
Q ss_pred CC--cccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 322 PP--STCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 322 ~p--~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
.+ ...++.. .. . ....+.. ..++..+++++.++. .++++++ ...|++.+.++.+.+++++.+.|.+
T Consensus 208 ~~~~~~~~~~~-~~-~----~~~~~~~--~~~~~~~t~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~ 277 (356)
T cd06451 208 KKKTKPKGFYF-DL-L----LLLKYWG--EGYSYPHTPPVNLLYALREALDLI--LEEGLENRWARHRRLAKALREGLEA 277 (356)
T ss_pred HhcCCCCceee-cH-H----HHHhhhc--ccCCCCCCChHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1111100 00 0 0000000 112556777776543 4566665 3467888999999999999999988
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
+ +++++++. ..+.+++.+...+. +++..++++.|.+++||.+++|..|.
T Consensus 278 ~-g~~~~~~~-~~~~~~~~~~~~~~--------------~~~~~~~~~~L~~~~gI~~~~g~~~~--------------- 326 (356)
T cd06451 278 L-GLKLLAKP-ELRSPTVTAVLVPE--------------GVDGDEVVRRLMKRYNIEIAGGLGPT--------------- 326 (356)
T ss_pred c-CCeeccCc-ccCCCceEEEECCC--------------CCCHHHHHHHHHHhCCEEEecccccc---------------
Confidence 7 88887653 33456665555432 23467899999765599999876543
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.++++|+|++.+++++|+++++++|++++
T Consensus 327 --------------~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 327 --------------AGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred --------------cCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 24799999999999999999999999865
No 24
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=7.8e-33 Score=295.37 Aligned_cols=354 Identities=12% Similarity=0.056 Sum_probs=259.9
Q ss_pred CceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 76 RRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 76 ~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
+..+||+.+.+.+.|..|.+++...+. ++.| .+..+.++++++|+.+++++|++++++|+|+.+++|.+++.
T Consensus 11 ~~~~~f~~Gp~~~~~~~v~~a~~~~~~---~~~h-----r~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~ 82 (378)
T PRK03080 11 PADPRFSSGPCKKRPGWQLEALADALL---GRSH-----RQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEM 82 (378)
T ss_pred CCCCCcCCCCcCCChHHHHHHHHhhhc---ccCc-----CCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHH
Confidence 447899999999888879999976542 2223 33567899999999999999996554788875577888999
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH-H-HHcCC-eEEEEecCCCCCCCHHHHHHHHHHhhhCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-W-RQSLA-EVVEIGLDDNGLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~-~~~G~-~vv~v~~~~~~~ld~~~L~~~l~~~~~~~ 232 (625)
++..+ +++++. .|++ ..+|.+.... + +..|+ +++.++.+.++.+|+++ ++
T Consensus 83 ~~~~l---------------~~~~~~-~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~----i~------ 135 (378)
T PRK03080 83 ALWSL---------------LGARRV-DHLA-WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSA----VD------ 135 (378)
T ss_pred HHHhc---------------CCCCcc-eEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhh----cC------
Confidence 88776 343222 3444 5788887654 3 45688 99999988777788775 32
Q ss_pred CCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEe
Q 043646 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLIS 312 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~ 312 (625)
.+++|+++|++|.||.+.|+++|++ |++|++++||++|++|+.++|+++ +|++++|+||||++|.|+|+++++
T Consensus 136 ~~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~-----iD~~~~s~~K~l~~P~G~g~l~v~ 208 (378)
T PRK03080 136 FDRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWSK-----LDVYTFSWQKVLGGEGGHGMAILS 208 (378)
T ss_pred CCCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHHH-----CcEEEEehhhhCCCCCceEEEEEC
Confidence 2567999999999999999999999 889999999999999999999974 699999999999999999999999
Q ss_pred ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC---CChhHHHHH--HHHHHHHHHhhc-CHHHHHHHHHH
Q 043646 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG---GTPQIVQMI--RAALAFWVKEYI-GYEVIKKQEDV 386 (625)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~---gt~~~~~~~--~aal~~~~~~~~-g~~~i~~~~~~ 386 (625)
++. ++.+.|...|+....+. +..........+++. +||++.++. .++++++ ... |.+.+.+|.+.
T Consensus 209 ~~~--~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gG~e~i~~r~~~ 279 (378)
T PRK03080 209 PRA--VERLESYTPARPIPKFF-----RLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWA--NSIGGLDALIARTAA 279 (378)
T ss_pred HHH--HHhhhcccCCCCCchhh-----eeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHH--HHcCCHHHHHHHHHH
Confidence 998 55566655544321111 001100112234444 456766653 4677777 455 89999999999
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCc-ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQ-AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY 465 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~-~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~ 465 (625)
+++++++.|.++++++++.+.+..+. .+++|.+.... ... ..++...|.+ .||.++.|.++.
T Consensus 280 l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~------------~~~-~~~~~~~l~~-~~i~v~~g~~~~--- 342 (378)
T PRK03080 280 NASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ------------AAV-DAAAVAKLLR-ENGAVDIEPYRD--- 342 (378)
T ss_pred HHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch------------HHH-HHHHHHHHHH-cCCeeccccccC---
Confidence 99999999999987888764333344 57787653200 001 2235555645 488888765431
Q ss_pred hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 466 GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 466 ~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
..+.+|+|+++|++++||++++++|+++++..
T Consensus 343 --------------------------~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 343 --------------------------APNGLRIWCGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred --------------------------CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 13789999999999999999999999987654
No 25
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.5e-31 Score=287.09 Aligned_cols=388 Identities=12% Similarity=0.058 Sum_probs=268.8
Q ss_pred CCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCC--------CCcchHHHHHHHHHhhCCCCCCCCCCcc
Q 043646 43 HHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTA--------SGRSLRYIEDYIINNVLPFYGNTHTSDS 113 (625)
Q Consensus 43 ~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~--------~~~~p~~v~ea~~~~l~~~~~n~~~~~~ 113 (625)
..+|+. .+.++.++.+...+ |+|+++ ++++.+.+.+.+...+...++||+..
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~i-----------------yld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~-- 75 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDEL-----------------SLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEY-- 75 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHh-----------------hhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccC--
Confidence 344555 67788888886554 566666 67777788999988886666787652
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEE--eCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCC
Q 043646 114 YVGQRMTKMVHEASNYIKRCLGGGQA-DAIIF--CGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYE 190 (625)
Q Consensus 114 ~~~~~~~~~~~~~~~~ia~~~g~~~~-~~vif--t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~ 190 (625)
+. ..++++++++++++++|+++. ++++| |++||.+++..+..+... .+.++...-....+.+|+++..+
T Consensus 76 --~~-~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~-----~~~~~~~~g~~~~~~~ii~s~~~ 147 (431)
T TIGR01788 76 --PQ-TAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWR-----WRKRMEAAGKPTDKPNLVMGSNV 147 (431)
T ss_pred --cc-HHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHH-----HHHHHHhcCCCCCCcEEEEcCcc
Confidence 23 348999999999999999732 24555 666666655554333210 00000000001123479999999
Q ss_pred CchhHHHHHHcCCeEEEEecCCC-CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc------C
Q 043646 191 HHSNLLSWRQSLAEVVEIGLDDN-GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY------G 263 (625)
Q Consensus 191 h~s~~~~~~~~G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~------g 263 (625)
|+|+.++.+..|++++.||++++ +.+|+++|+++|+ ++|.+|++++++|.||.++|+++|+++|+++ |
T Consensus 148 H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-----~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~ 222 (431)
T TIGR01788 148 QVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-----ENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWD 222 (431)
T ss_pred hHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-----hCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCC
Confidence 99999999889999999999875 5899999999998 5789999999999999999999999999999 9
Q ss_pred CEEEEeccCcCCC-------ccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCC--CCcccCCceEEee
Q 043646 264 GFACFDFAASGPY-------VKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSS--PPSTCGGGTVNYV 334 (625)
Q Consensus 264 ~~vivD~A~~~g~-------~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~--~p~~~ggg~v~~~ 334 (625)
+|+|+|+|++++. .+.+++. .++|++++|+|||+.+|.|+|++++++.......+ .+.+.++....
T Consensus 223 ~~~HvDaaq~g~~~p~~~~~~~~~~~~---~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~-- 297 (431)
T TIGR01788 223 IPIHVDAASGGFIAPFVYPDLEWDFRL---PRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPT-- 297 (431)
T ss_pred ceEEEecccHHHHHHHhCCCchhhcCC---CCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCC--
Confidence 9999999999544 4444442 48999999999998789999999998762101111 12233322100
Q ss_pred ccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcce
Q 043646 335 NAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAI 414 (625)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i 414 (625)
...+ ++.+....+..=+.+......|++.+.++..++++++.++|+++|+++++++. .+.++
T Consensus 298 ---------------~t~~-~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~--~~~~i 359 (431)
T TIGR01788 298 ---------------FTLN-FSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG--SGIPL 359 (431)
T ss_pred ---------------ccee-cCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC--CCceE
Confidence 0011 11111111110011111145688899999999999999999999999999762 37899
Q ss_pred EEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCc
Q 043646 415 LSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPG 494 (625)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g 494 (625)
++|...+.. ...++..++.+.|.+ .|+.+.. +..|. .++ ..-
T Consensus 360 V~Fr~~~~~-----------~~~~~~~~l~~~L~~-~G~~~~~---~~~p~-----~~~------------------~~~ 401 (431)
T TIGR01788 360 VAFKLKDDA-----------DPGYTLYDLSHRLRE-RGWIVPA---YTLPK-----NAE------------------DIV 401 (431)
T ss_pred EEEEeCCCC-----------CCCcCHHHHHHHHHH-CCCcccC---CCCCC-----ccC------------------CeE
Confidence 999986521 123456789999865 6886531 11110 000 125
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 495 WTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 495 ~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.+|+++....+.+.++.|++.|++++.+.
T Consensus 402 ~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 402 VMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 68999988899999999999999987653
No 26
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=4e-31 Score=281.50 Aligned_cols=347 Identities=10% Similarity=0.026 Sum_probs=246.2
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA-DAIIFCGAGTTAAIKRLQEVMGITVP 165 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~ 165 (625)
+|.|..+.+++.+.+...+. + .+..+.+.++++++.+++++|++++ +.|++| +|++.++..++..+
T Consensus 8 ~pgp~~~~~~v~~~~~~~~~--~-----~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t-~~~t~al~~~~~~l----- 74 (363)
T TIGR02326 8 TPGPLTTSRTVKEAMLFDWC--T-----WDSDYNIVVEQIRQQLLALATAEEGYTSVLLQ-GSGTFAVEAVIGSA----- 74 (363)
T ss_pred cCCCCCCCHHHHHHhCCCCC--C-----CChHHHHHHHHHHHHHHHHhCCCCCceEEEEc-CCCHHHHHHHHHhc-----
Confidence 44454555555555533221 1 1245677899999999999999764 368898 56677788887766
Q ss_pred chhhhhhhhccCCCCceEEEEcCCCCchh-HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 166 SIMRDKLITSLRDEERWVVFLGPYEHHSN-LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
+.++|+ +|++++.+|++. ...++..|++++.++.+.++.+|+++++++++++ +++++|++++++|
T Consensus 75 ----------~~~~~~-vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~~ 140 (363)
T TIGR02326 75 ----------VPKDGK-LLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAAD---PAITHIALVHCET 140 (363)
T ss_pred ----------CCCCCe-EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC---CCccEEEEEeecC
Confidence 356664 566667777664 3445678999999999888889999999999842 3578899999999
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCc
Q 043646 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPS 324 (625)
Q Consensus 245 ~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~ 324 (625)
+||.+.|+++|+++||++|+++++|++|++|..++++..+ ++|++++|+|||+++|.|+|+++++++.. ..+.+.
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~~~~--~~~~~~ 215 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQAEL--AACKGN 215 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECHHHH--HHhhcC
Confidence 9999999999999999999999999999999999999887 89999999999998899999999998873 222221
Q ss_pred ccCCceEEeecccccccccccc--chhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 325 TCGGGTVNYVNAFDEKDTLYLE--DIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~--~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
..+ ...+.... ..+.. ....+| |++...+. .++++.+. +..|++.+.++.+.+++++++.|.++ +
T Consensus 216 ~~~-~~~~~~~~-----~~~~~~~~~~~~f---t~~~~~~~al~~al~~l~-~~g~~~~~~~~~~~~~~~l~~~L~~~-g 284 (363)
T TIGR02326 216 ARS-LSLDLYDQ-----WRCMEDNHGKWRF---TSPTHVVHAFAQALLELE-KEGGVAARHQRYQQNQKTLVAGMRAL-G 284 (363)
T ss_pred CCc-eeecHHHH-----HHHHhccCCCCCC---CCcHHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 110 00000000 00000 001122 33333332 34555542 33468889999999999999999887 7
Q ss_pred EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHH
Q 043646 401 IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 401 v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~ 480 (625)
++++.+. ..+.++++++..++. ..++...+.+.|. ++||.+++|..+.
T Consensus 285 ~~~~~~~-~~~~~~~~~~~~~~~------------~~~~~~~v~~~L~-~~gi~v~~g~~~~------------------ 332 (363)
T TIGR02326 285 FEPLLDD-EIQSPIITSFYSPED------------PDYRFADFYQRLK-EQGFVIYPGKVSQ------------------ 332 (363)
T ss_pred CeeccCc-ccCCceEEEEECCCC------------CCCCHHHHHHHHH-HCCEEEECCcCCC------------------
Confidence 7777553 335666555554421 0123567888885 4699999775431
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.+++||++..+++.+|+++++++|++++
T Consensus 333 ------------~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 333 ------------VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred ------------CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 3689999877899999999999999864
No 27
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=7.2e-31 Score=278.14 Aligned_cols=336 Identities=16% Similarity=0.127 Sum_probs=249.3
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~-~vift~sGttaal~~l~ 157 (625)
.|+-+......+...++.+.......++||... +..+..+.++.+++++++++++|+++++ ..+||++||.+++..+.
T Consensus 24 ~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~-~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~ 102 (380)
T PRK02769 24 FNVGYPEAADFDYSALKRFFSFSINNCGDPYSK-SNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCY 102 (380)
T ss_pred cccCCCchhhcCHHHHHHHHHhhhccCCCcccc-CCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHH
Confidence 344444445454455666666665667888763 4456667889999999999999998653 25888666666665544
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEE
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLG 237 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv 237 (625)
.++. +.+++ +|++++.+|+|+.++++..|.+.+.|+.+++|.+|+++|+++|+++ +.+|.+|
T Consensus 103 ~ar~--------------~~~~~--~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~--~~~t~lv 164 (380)
T PRK02769 103 LARE--------------LFPDG--TLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKEN--KNQPPII 164 (380)
T ss_pred HHHH--------------hCCCc--EEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhC--CCCcEEE
Confidence 4332 24555 5999999999999999999999999999888999999999999852 3469999
Q ss_pred EEecccCccccccCHHHHHHHHHHcC---CEEEEeccCcCCCcc-------ccCCCCCCCCCcEEEEcCCCCCCCCCCce
Q 043646 238 SFSACSNVTGIYSDTRSIARLLHQYG---GFACFDFAASGPYVK-------INLRSRNIDGYDAIFLATHKFLGGPGTPG 307 (625)
Q Consensus 238 ~~~~~~n~TG~~~~l~~I~~la~~~g---~~vivD~A~~~g~~~-------id~~~~~~~~~D~v~~S~hK~lggp~g~G 307 (625)
++++++|+||.++|+++|+++|+++| +|+|||+|++++..+ +|+.. ++|++++|+|||+++|.|+|
T Consensus 165 v~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~----~vDsis~s~HK~~~~P~g~G 240 (380)
T PRK02769 165 FANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD----GIDSIAISGHKFIGSPMPCG 240 (380)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC----CCCEEEECCcccCCCCCCcE
Confidence 99999999999999999999999998 699999999998885 44432 79999999999999999999
Q ss_pred EEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHH
Q 043646 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQED 385 (625)
Q Consensus 308 ~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~ 385 (625)
+++++++. +..+.+. ..|... ......||.+...++ .+++.++ ...|++++.+++.
T Consensus 241 ~l~~r~~~--~~~~~~~------~~yl~~------------~d~t~~GSR~g~~~l~lw~aL~~l--g~~G~~~~~~~~~ 298 (380)
T PRK02769 241 IVLAKKKY--VERISVD------VDYIGS------------RDQTISGSRNGHTALLLWAAIRSL--GSKGLRQRVQHCL 298 (380)
T ss_pred EEEEehhh--hhhcccC------ccccCC------------CCCCccCCCCcHHHHHHHHHHHHH--CHHHHHHHHHHHH
Confidence 99999877 3333221 111111 011236777655443 3445554 6778999999999
Q ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh
Q 043646 386 VYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY 465 (625)
Q Consensus 386 ~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~ 465 (625)
++++++.++|++. +++++.++ ...+++|.... .++. + |-.+.+
T Consensus 299 ~la~~l~~~L~~~-g~~~~~~p---~~~~v~f~~~~-------------------~~~~----~--~w~l~~-------- 341 (380)
T PRK02769 299 DMAQYAVDRLQAN-GIPAWRNP---NSITVVFPCPS-------------------ERIW----K--KWHLAT-------- 341 (380)
T ss_pred HHHHHHHHHHHhC-CCEEEcCC---CceEEEEcCCC-------------------HHHH----h--CeeEcc--------
Confidence 9999999999875 88887653 45666664321 1221 2 333321
Q ss_pred hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 466 GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 466 ~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++||.+...++.+.+|.|++.|......
T Consensus 342 --------------------------~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 342 --------------------------SGNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred --------------------------cCCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 1367999999999999999999999887654
No 28
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.98 E-value=4.4e-30 Score=280.32 Aligned_cols=359 Identities=14% Similarity=0.160 Sum_probs=255.6
Q ss_pred CCcchHHHHHHHHHhhCCCC--CCCCCCcchhhHHHHHHHH-HHHHHHHHHhCCCCCCcEEEe---CChHHHHHHHHHHH
Q 043646 86 SGRSLRYIEDYIINNVLPFY--GNTHTSDSYVGQRMTKMVH-EASNYIKRCLGGGQADAIIFC---GAGTTAAIKRLQEV 159 (625)
Q Consensus 86 ~~~~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~~~~~~~-~~~~~ia~~~g~~~~~~vift---~sGttaal~~l~~~ 159 (625)
-..+++.|++++...+...| +||++. +..|....+.++ .+++.+++++|++++ ++.++ .+|+.+ ...++.+
T Consensus 43 en~~s~~v~~~~~~~l~~~y~~g~p~s~-~~~g~~~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~sgt~a-n~~v~~a 119 (452)
T PTZ00094 43 ENFTSRAVLECLGSCFTNKYAEGLPGNR-YYGGNEVVDKIENLCQKRALEAFGLDPE-EWGVNVQPYSGSPA-NFAVYTA 119 (452)
T ss_pred cccCCHHHHHHhcchhhccccCCCCCcc-ccccchHHHHHHHHHHHHHHHHhCCCcc-cceeecCCCchHHH-HHHHHHH
Confidence 34567789999998887777 899874 556766667666 489999999999776 56565 345544 4444454
Q ss_pred hcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc----------CCeEEEEecCCCCCCCHHHHHHHHHHhh
Q 043646 160 MGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS----------LAEVVEIGLDDNGLLDIEALRSQLELYK 229 (625)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~----------G~~vv~v~~~~~~~ld~~~L~~~l~~~~ 229 (625)
+ +++||. |++++.+|.++...+... +.++..++++.+|.+|+++|+++++.
T Consensus 120 l---------------~~~gd~--Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~-- 180 (452)
T PTZ00094 120 L---------------LQPHDR--IMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKA-- 180 (452)
T ss_pred h---------------cCCCCE--EEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHH--
Confidence 4 467885 999999999987665321 13445566777799999999999974
Q ss_pred hCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEE
Q 043646 230 AAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGIL 309 (625)
Q Consensus 230 ~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l 309 (625)
.++++|++. ++.+|...|+++|+++||++|+++++|++|++|.++.++......++|++++|+||||+||.| |++
T Consensus 181 --~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l 255 (452)
T PTZ00094 181 --FRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLI 255 (452)
T ss_pred --hCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEE
Confidence 367777664 346999999999999999999999999999999998877554334799999999999999998 888
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVY 387 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l 387 (625)
++++... ..+.+... . ..+ . .+ .|+++...++. ++++++ ...+.+.+.++...+
T Consensus 256 ~~~~~~~--~~l~~~~~--~------------~~~----p-~~-~G~~~~~~iaal~~al~~~--~~~~~~~~~~~i~~l 311 (452)
T PTZ00094 256 FYRKKVK--PDIENKIN--E------------AVF----P-GL-QGGPHNHQIAAIAVQLKEV--QSPEWKEYAKQVLKN 311 (452)
T ss_pred EEecccc--hHHHHhhc--c------------ccC----C-CC-CCCchHHHHHHHHHHHHHH--hChhHHHHHHHHHHH
Confidence 8887651 11111000 0 000 0 11 35665555543 344443 345777889999999
Q ss_pred HHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeee-ecCCCCCchhh
Q 043646 388 IESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQA-RGGCACAGPYG 466 (625)
Q Consensus 388 ~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v-~~G~~~~~~~~ 466 (625)
++++.+.|.+. |+++..+....+..++.|... ++++..+...| +++||.+ +.|..|+.. .
T Consensus 312 ~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~----------------~~~~~~~~~~L-~~~gI~vs~~~~p~~~~-~ 372 (452)
T PTZ00094 312 AKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF----------------GITGSKMEKLL-DAVNISVNKNTIPGDKS-A 372 (452)
T ss_pred HHHHHHHHHhC-CcEEecCCCCCceEeecCCcC----------------CCCHHHHHHHH-HHCCcEEecccCCCCCc-C
Confidence 99999999875 888876432223333333221 34567788888 5589999 555555411 1
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCC----HHHHHHHHHHHHHHHHhhhhcccCccccccccccc
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMS----NEEFEFILAALEFIAAYGHRFLPLYHFNVKAGNWC 540 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t----~edid~ll~aL~~~~~~~~~~~~~y~~~~~~~~w~ 540 (625)
..++++|+|++++++ ++|+++++++|++++.....+.+.| ++++.+|.
T Consensus 373 ------------------------~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~ 424 (452)
T PTZ00094 373 ------------------------LNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQKQV--GKKLVDFK 424 (452)
T ss_pred ------------------------CCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhhhhhc--ccchhhhh
Confidence 135899999999987 9999999999999998876666666 66665554
No 29
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.97 E-value=1.1e-30 Score=276.76 Aligned_cols=339 Identities=15% Similarity=0.147 Sum_probs=237.6
Q ss_pred CCCCcchHHHHHHHHHhhCCCCCCCCCCcchhh---HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHh
Q 043646 84 TASGRSLRYIEDYIINNVLPFYGNTHTSDSYVG---QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVM 160 (625)
Q Consensus 84 ~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~---~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l 160 (625)
++..+.|+.|.+++.+.+..+. |++.+.+..+ ..+.+.++++|+.+++++|++.+++|+||.+++|.+++.++..+
T Consensus 5 pGp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 5 AGPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 3446788999999999886654 8887666666 56779999999999999998555589999555999999998887
Q ss_pred cccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCC-C-HHHHHHHHHHhhhCCCCeEEE
Q 043646 161 GITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLL-D-IEALRSQLELYKAAKRPMLGS 238 (625)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~l-d-~~~L~~~l~~~~~~~~~~lv~ 238 (625)
-. ..++++ +|++.+..|.+. ...+..|++++.++.+.++.+ + ++..+..++ +++++|+
T Consensus 84 ~~------------~~~~~~--~i~~g~~~~~~~-~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~lV~ 143 (355)
T cd00611 84 LG------------DKGTAD--YVVTGAWSAKAA-KEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-----PDAAYVH 143 (355)
T ss_pred CC------------CCCeEE--EEECCHHHHHHH-HHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-----CCCCEEE
Confidence 20 012444 466666666553 244667999999998654322 4 222223333 6899999
Q ss_pred EecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecccccc
Q 043646 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQL 318 (625)
Q Consensus 239 ~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l 318 (625)
++|++|.||...+ ++++.||++++||++|++|+.++|++++ |++++|.||+|| |.|+|++++++++ +
T Consensus 144 ~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~~-----~~~~ss~~K~lG-P~G~g~l~~~~~~--~ 210 (355)
T cd00611 144 YCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSKF-----GVIYAGAQKNLG-PAGVTVVIVRKDL--L 210 (355)
T ss_pred EeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHHh-----CEEEeecccccC-CCceEEEEECHHH--H
Confidence 9999999999833 4455699999999999999999999876 456677999986 9999999999998 4
Q ss_pred CCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHhh
Q 043646 319 GSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYI-GYEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~l~~~L 395 (625)
..+.|.... .. .+..........|||++.+++ .++++++ ..+ |++.+.+|++.+++++++.|
T Consensus 211 ~~~~~~~~~--~~-----------~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l--~~~gg~e~i~~~~~~l~~~l~~~l 275 (355)
T cd00611 211 GKARKITPS--ML-----------NYKTHADNNSLYNTPPTFAIYMMGLVLKWL--KEQGGVEAMEKRNRQKAQLLYDTI 275 (355)
T ss_pred hhcccCCCC--cc-----------cHHHHHhcCCCCCCChHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHH
Confidence 444443211 00 000000112236899988875 4677777 566 79999999999999999999
Q ss_pred CCCCcEEEeCCCC-CCCcc-eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCC
Q 043646 396 LPNQNIQVLGNTS-VKRQA-ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFD 473 (625)
Q Consensus 396 ~~l~gv~v~~~~~-~~~~~-i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~ 473 (625)
.++||+.. .+.+ ..|.+ +++|.+... .+. .++. +|.++.|.+ . +.++.
T Consensus 276 ~~~~gl~~-~~~~~~~rs~~vvsf~~~~~--------------~l~-~~~~-------~~~~r~G~~-~-~~~~~----- 325 (355)
T cd00611 276 DNSNGFYR-GPVDKRARSRMNVPFRLGKE--------------ELE-KEFL-------KEAEAAGMI-G-LKGHR----- 325 (355)
T ss_pred HhCccccc-cCCCHHHcCceEEEEEcCCh--------------hhh-HHHH-------HHHHHCCCc-c-cCCCc-----
Confidence 99988521 2211 23664 588886420 000 1121 344444442 2 21221
Q ss_pred hhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 474 QTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 474 ~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..|.+|+|+++|+|++|||+|+++|+++
T Consensus 326 ------------------~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 326 ------------------SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ------------------ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1378999999999999999999999985
No 30
>PLN02590 probable tyrosine decarboxylase
Probab=99.97 E-value=1e-28 Score=269.80 Aligned_cols=422 Identities=11% Similarity=0.030 Sum_probs=277.0
Q ss_pred cccccccccCCCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCC
Q 043646 33 RQTCSEFKNDHHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTS 111 (625)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~ 111 (625)
.+..+.+++..++|+. .+.++.++++++.+......+.+| +.+.|+.. +..+..++..+.... -|+...
T Consensus 91 ~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP---~f~a~~~~---~~~~~~~lgd~l~sa----~n~~~~ 160 (539)
T PLN02590 91 QPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQSP---SYFAYYAS---STSVAGFLGEMLNAG----LSVVGF 160 (539)
T ss_pred ChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCC---CeeEeccC---CCcHHHHHHHHHHHh----cccccC
Confidence 3455666677777776 788899999999887666666665 65666554 344444443333222 244444
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhCCCCC------CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEE
Q 043646 112 DSYVGQRMTKMVHEASNYIKRCLGGGQA------DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVF 185 (625)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~ia~~~g~~~~------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vl 185 (625)
.+..++..+++..++.+|+++++|.+.. ...+|+++||.++|..+..++....+ .. +.....+.+|+
T Consensus 161 ~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~----~~---g~~~~~~~vvy 233 (539)
T PLN02590 161 TWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILK----KV---GKTLLPQLVVY 233 (539)
T ss_pred CcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHh----hh---cccCCCCEEEE
Confidence 4667788899999999999999999753 24677878888888887776532110 00 01111245788
Q ss_pred EcCCCCchhHHHHHHcCC---eEEEEecCC--CCCCCHHHHHHHHHHhhhC-CCCeEEEEecccCccccccCHHHHHHHH
Q 043646 186 LGPYEHHSNLLSWRQSLA---EVVEIGLDD--NGLLDIEALRSQLELYKAA-KRPMLGSFSACSNVTGIYSDTRSIARLL 259 (625)
Q Consensus 186 v~~~~h~s~~~~~~~~G~---~vv~v~~~~--~~~ld~~~L~~~l~~~~~~-~~~~lv~~~~~~n~TG~~~~l~~I~~la 259 (625)
++...|+|+.++++..|+ +++.||++. ++.+|+++|+++|.++... ..|.+|+.+..++.||.++|+++|+++|
T Consensus 234 ~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~ 313 (539)
T PLN02590 234 GSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIA 313 (539)
T ss_pred ecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHH
Confidence 899999999999999887 589999984 5799999999999865433 3588999999999999999999999999
Q ss_pred HHcCCEEEEeccCcCCCcccc-CCCC--CCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCC--CCCcccCCceEEee
Q 043646 260 HQYGGFACFDFAASGPYVKIN-LRSR--NIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGS--SPPSTCGGGTVNYV 334 (625)
Q Consensus 260 ~~~g~~vivD~A~~~g~~~id-~~~~--~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~--~~p~~~ggg~v~~~ 334 (625)
++||+|+|||+|++......+ .+.+ +.+.+|++++++|||++.|.+||++++++.....+. ..+.+..... ..
T Consensus 314 ~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~-~~- 391 (539)
T PLN02590 314 KKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKV-SK- 391 (539)
T ss_pred HHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcc-cc-
Confidence 999999999999876553221 2111 345789999999999999999999999975311111 1111110000 00
Q ss_pred ccccccccccccchhhhhcCCChhHHH-HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcc
Q 043646 335 NAFDEKDTLYLEDIEERENGGTPQIVQ-MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQA 413 (625)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~gt~~~~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~ 413 (625)
......+. ....+.+.. +-+ .+-.++... ...|+..+.++..++++++.+.|++.|+++++.+. ..+
T Consensus 392 ---~~~~~d~~---d~~i~lsRr-~raLklW~~lr~~--G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~---~l~ 459 (539)
T PLN02590 392 ---KDTVVNYK---DWQISLSRR-FRSLKLWMVLRLY--GSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR---YFS 459 (539)
T ss_pred ---cccCCCcc---ccCCCCCCc-hHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---ceE
Confidence 00000000 001111111 111 111222222 44567788888889999999999999999999864 689
Q ss_pred eEEEEeccCCCCCCccccccCCCCCC--hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCC
Q 043646 414 ILSFLVYSTTNSSPENMKIERNKPLH--GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGV 491 (625)
Q Consensus 414 i~~f~~~~~~~~~~~~~~~~~~~~l~--~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~ 491 (625)
+++|...+....+ ...+ ...+.+.|++.-.+.+. ... + .
T Consensus 460 iVcFr~~~~~~~~---------~~~~~ln~~l~~~l~~~G~~~vs-~t~---------~------------------~-- 500 (539)
T PLN02590 460 LVCFRLAPVDGDE---------DQCNERNRELLAAVNSTGKIFIS-HTA---------L------------------S-- 500 (539)
T ss_pred EEEEEecCCCCCH---------HHHHHHHHHHHHHHHhCCCEEEE-eeE---------E------------------C--
Confidence 9999987632100 0000 12344444432222222 110 0 1
Q ss_pred CCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 492 KPGWTRITF-PYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 492 ~~g~iRis~-~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
...++|+++ .+.++++||+.+++.|.+.+.+..
T Consensus 501 g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 501 GKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 136899998 688999999999999999876653
No 31
>PLN02880 tyrosine decarboxylase
Probab=99.97 E-value=5.7e-29 Score=271.88 Aligned_cols=417 Identities=10% Similarity=0.050 Sum_probs=272.5
Q ss_pred ccccccccCCCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCc
Q 043646 34 QTCSEFKNDHHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSD 112 (625)
Q Consensus 34 ~~~~~~~~~~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~ 112 (625)
+.++.+.++...|.. .+.++.++.+.+.+......+.+| +.+.|+..+. .+..++..+..... |+....
T Consensus 44 p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP---~f~~~~~~~~---~~~~~lad~l~~~~----n~~~~~ 113 (490)
T PLN02880 44 PGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSP---NYFAYYPSNS---SVAGFLGEMLSAGL----NIVGFS 113 (490)
T ss_pred HHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCC---CeeEeccCCC---cHHHHHHHHHHHhh----ccCCcc
Confidence 344555566665555 788999999999887665556665 5566655433 33344433333221 433333
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCCCCC------CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE
Q 043646 113 SYVGQRMTKMVHEASNYIKRCLGGGQA------DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL 186 (625)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ia~~~g~~~~------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv 186 (625)
+..++..++++.++.+|+++++|.+.+ ...+||++||.++|..+..++....+ + .+.....+.+|++
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~----~---~g~~~~~~~vv~~ 186 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLR----K---VGKNALEKLVVYA 186 (490)
T ss_pred cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHH----H---hcccccCCeEEEE
Confidence 556677889999999999999999753 13678878899988888777632110 0 0111123457888
Q ss_pred cCCCCchhHHHHHHcCC---eEEEEecCC--CCCCCHHHHHHHHHHhhh-CCCCeEEEEecccCccccccCHHHHHHHHH
Q 043646 187 GPYEHHSNLLSWRQSLA---EVVEIGLDD--NGLLDIEALRSQLELYKA-AKRPMLGSFSACSNVTGIYSDTRSIARLLH 260 (625)
Q Consensus 187 ~~~~h~s~~~~~~~~G~---~vv~v~~~~--~~~ld~~~L~~~l~~~~~-~~~~~lv~~~~~~n~TG~~~~l~~I~~la~ 260 (625)
+...|+|+.++++..|. .++.||++. ++.+|+++|+++|.++.. +..|.+|+.+.+++.||.++|+++|+++|+
T Consensus 187 S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~ 266 (490)
T PLN02880 187 SDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAK 266 (490)
T ss_pred cCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHH
Confidence 99999999999999988 488999975 568999999999986543 335889999999999999999999999999
Q ss_pred HcCCEEEEeccCcCCCccc-----cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeec
Q 043646 261 QYGGFACFDFAASGPYVKI-----NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVN 335 (625)
Q Consensus 261 ~~g~~vivD~A~~~g~~~i-----d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~ 335 (625)
+||+|+|||+|++++.... .++. .+++|++++++|||++.|.++|++++++.....+ +....+..+...
T Consensus 267 ~~~iwlHVDaA~gg~~~~~~~~~~~l~g--ie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~---~~~~~~~Yl~~~- 340 (490)
T PLN02880 267 SNGMWFHVDAAYAGSACICPEYRHYIDG--VEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQ---SLSTNPEFLKNK- 340 (490)
T ss_pred HcCCEEEEehhhHHHHHhCHHHHHHhcC--chhcCEEEECchhhcCCCccEEEEEEeCHHHHHH---HHccCHHHhcCc-
Confidence 9999999999988775432 1222 2478999999999999999999999996431111 111111000000
Q ss_pred cccccccccccchhhhhcCCChhHHHHHHHHHHHHH-HhhcCHHHHHHHHH---HHHHHHHHhhCCCCcEEEeCCCCCCC
Q 043646 336 AFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWV-KEYIGYEVIKKQED---VYIESALGRILPNQNIQVLGNTSVKR 411 (625)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~-~~~~g~~~i~~~~~---~l~~~l~~~L~~l~gv~v~~~~~~~~ 411 (625)
........+......+.|.. ..++.+|. ....|.+.+.+++. ++++++.+.|++.++++++.+. .
T Consensus 341 --~~~~~~~~~~~~~~i~~~rr------~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~---~ 409 (490)
T PLN02880 341 --ASQANSVVDYKDWQIPLGRR------FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR---I 409 (490)
T ss_pred --cccccCCCChhccCcCCCCc------ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC---c
Confidence 00000000000000011111 01244432 23456666666665 9999999999999999999874 5
Q ss_pred cceEEEEeccCCCCCCccccccCCCCCC--hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCC
Q 043646 412 QAILSFLVYSTTNSSPENMKIERNKPLH--GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYL 489 (625)
Q Consensus 412 ~~i~~f~~~~~~~~~~~~~~~~~~~~l~--~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~ 489 (625)
.++++|...+..... ...+ ...+.+.|++...+.+......
T Consensus 410 ~~iv~Fr~~~~~~~~---------~~~~~~n~~l~~~l~~~g~~~v~~t~~~---------------------------- 452 (490)
T PLN02880 410 FSLVCFRLVPPKNNE---------DNGNKLNHDLLDAVNSSGKIFISHTVLS---------------------------- 452 (490)
T ss_pred eEEEEEEEeCCCCCh---------hhHHHHHHHHHHHHHhCCCEEEEEEEEC----------------------------
Confidence 789999886531000 0000 1234555555455555422111
Q ss_pred CCCCcEEEEecC-CCCCHHHHHHHHHHHHHHHHhh
Q 043646 490 GVKPGWTRITFP-YYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 490 g~~~g~iRis~~-~~~t~edid~ll~aL~~~~~~~ 523 (625)
...++|++++ +.++++|++.+++.|+++..+.
T Consensus 453 --g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 453 --GKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred --CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2478999996 5556799999999999987764
No 32
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.97 E-value=2e-28 Score=267.94 Aligned_cols=348 Identities=16% Similarity=0.191 Sum_probs=240.8
Q ss_pred CCCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchH-HHHHHHHHhhCCCCCCCCCCcchhhHHH
Q 043646 42 DHHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLR-YIEDYIINNVLPFYGNTHTSDSYVGQRM 119 (625)
Q Consensus 42 ~~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~-~v~ea~~~~l~~~~~n~~~~~~~~~~~~ 119 (625)
...+|.. .+.++.++.+.+.+......+.+| +.+.|+..+ .++.- .+.+ +...+ |+....+..++..
T Consensus 59 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP---~f~g~~~~~--~p~~~~~l~~-l~~~l-----N~n~~~~~~spa~ 127 (522)
T TIGR03799 59 SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASP---SFIGHMTSA--LPYFMLPLSK-LMVAL-----NQNLVKIETSKAF 127 (522)
T ss_pred ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCC---CeEEeccCC--CchHHHHHHH-HHHHh-----cCCcceeecCcch
Confidence 4455555 677888999888886666666666 667787774 12111 1222 33322 4433346678888
Q ss_pred HHHHHHHHHHHHHHhCCCC------------CCcEEEeCChHHHHHHHHHHHhcccccc------hhhhhhhhccC--CC
Q 043646 120 TKMVHEASNYIKRCLGGGQ------------ADAIIFCGAGTTAAIKRLQEVMGITVPS------IMRDKLITSLR--DE 179 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~------------~~~vift~sGttaal~~l~~~l~~~~~~------~~~~~~~~~l~--~g 179 (625)
+++..++.+|++++++..+ ....+||++||.++|..+..++....+. ..++.+...+. ..
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 9999999999999985311 1146788889999999988877532110 00011000000 01
Q ss_pred CceEEEEcCCCCchhHHHHHHcCC---eEEEEecCCCCCCCHHHHHHHHHHhhhCC-CCeEEEEecccCccccccCHHHH
Q 043646 180 ERWVVFLGPYEHHSNLLSWRQSLA---EVVEIGLDDNGLLDIEALRSQLELYKAAK-RPMLGSFSACSNVTGIYSDTRSI 255 (625)
Q Consensus 180 d~~~Vlv~~~~h~s~~~~~~~~G~---~vv~v~~~~~~~ld~~~L~~~l~~~~~~~-~~~lv~~~~~~n~TG~~~~l~~I 255 (625)
++.+|+++..+|+|+.++.+..|. +++.||++.++.+|+++|+++|.+....+ ++.+|+.++.++.||.++|+++|
T Consensus 208 ~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eI 287 (522)
T TIGR03799 208 DGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEM 287 (522)
T ss_pred CceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHH
Confidence 245799999999999999888887 79999999999999999999997543222 34455555778899999999999
Q ss_pred HHHHHHcCCEEEEeccCcCCCcccc-----CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCC---cccC
Q 043646 256 ARLLHQYGGFACFDFAASGPYVKIN-----LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPP---STCG 327 (625)
Q Consensus 256 ~~la~~~g~~vivD~A~~~g~~~id-----~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p---~~~g 327 (625)
+++|+++|+|+|||+|++++....+ ++. .+++|++++++|||+++|.|+|++++++... ++.+.+ +...
T Consensus 288 a~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~g--le~aDSit~d~HK~l~~P~g~G~llvr~~~~-~~~~~~~~~Yl~~ 364 (522)
T TIGR03799 288 ADIAQELGCHFHVDAAWGGATLLSNTYRHLLKG--IERADSVTIDAHKQLYVPMGAGMVLFKDPAL-MSAIEHHAEYILR 364 (522)
T ss_pred HHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcC--chhCCEEEEChhhcCCcCcccEEEEEeCHHH-HHHhccCcchhcC
Confidence 9999999999999999998765544 232 2478999999999999999999999987542 222222 1100
Q ss_pred CceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCC
Q 043646 328 GGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNT 407 (625)
Q Consensus 328 gg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~ 407 (625)
.+. .. .....++.+.+...-.+.+++.++ ...|++.+.++...+++++.+.|++.|+++++.+.
T Consensus 365 ~~~-----------~d---~~~~~legsR~~~al~lw~aL~~l--G~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p 428 (522)
T TIGR03799 365 KGS-----------KD---LGSHTLEGSRPGMAMLVYAGLHII--GRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP 428 (522)
T ss_pred CCC-----------Cc---cccceeecCcchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC
Confidence 000 00 002334544443322234556655 67799999999999999999999999999999864
Q ss_pred CCCCcceEEEEeccC
Q 043646 408 SVKRQAILSFLVYST 422 (625)
Q Consensus 408 ~~~~~~i~~f~~~~~ 422 (625)
..++++|...+.
T Consensus 429 ---~l~iv~Fr~~p~ 440 (522)
T TIGR03799 429 ---ELCLLTYRYVPE 440 (522)
T ss_pred ---CccEEEEEEeCh
Confidence 678999998664
No 33
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=1.4e-29 Score=267.68 Aligned_cols=315 Identities=17% Similarity=0.123 Sum_probs=226.8
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHhCCC-CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEE
Q 043646 107 NTHTSDSYVGQRMTKMVHEASNYIKRCLGGG-QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVF 185 (625)
Q Consensus 107 n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~-~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vl 185 (625)
|++...|..+....++++++++++++++|.+ .+.+++||+ |++.++..++.++...... +.-..+..++++.+|+
T Consensus 24 n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~-ggt~a~~~al~~~~~~~~~---~~~~~~~~~~~~~~v~ 99 (345)
T cd06450 24 NAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTS-GGSESNLLALLAARDRARK---RLKAGGGRGIDKLVIV 99 (345)
T ss_pred CCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeC-ChhHHHHHHHHHHHHHhhh---hhhcccccccCCeEEE
Confidence 4443335566778899999999999999996 333789995 5555555555444110000 0000001244555799
Q ss_pred EcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh-CCCCeEEEEecccCccccccCHHHHHHHHHHcCC
Q 043646 186 LGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA-AKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGG 264 (625)
Q Consensus 186 v~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~-~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~ 264 (625)
+++.+|+++..+++..|++++.+++++++.+|+++|+++++++.. +.++++|++++++|+||.+.|+++|+++|+++|+
T Consensus 100 ~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~ 179 (345)
T cd06450 100 CSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDL 179 (345)
T ss_pred EcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCC
Confidence 999999999888888899999999988889999999999974221 2268899999999999999999999999999999
Q ss_pred EEEEeccCcCCCccccCCC---CCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccc
Q 043646 265 FACFDFAASGPYVKINLRS---RNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 265 ~vivD~A~~~g~~~id~~~---~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (625)
++|+|+|++.+..+.+... ....++|++++|+|||+++|.|+|+++++ .
T Consensus 180 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~--~-------------------------- 231 (345)
T cd06450 180 WLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR--A-------------------------- 231 (345)
T ss_pred eEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH--H--------------------------
Confidence 9999999998776543221 11237899999999999989988877654 1
Q ss_pred cccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEecc
Q 043646 342 TLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
....+++.++ ...|++.+.++..++++++.+.|.++++++++.+. +.++++|...+
T Consensus 232 -------------------~~~~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~iv~f~~~~ 287 (345)
T cd06450 232 -------------------LKLWATLRRF--GRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP---NLSLVCFRLKP 287 (345)
T ss_pred -------------------HHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---ceeEEEEEECC
Confidence 0112334443 44578888999999999999999999999887643 46788887654
Q ss_pred CCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecC
Q 043646 422 TTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFP 501 (625)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~ 501 (625)
.. ...++..++.+.|.+ +|+.+.++..+. .++++||+++
T Consensus 288 ~~-----------~~~~~~~~i~~~L~~-~g~~~~~~~~~~-----------------------------~~~~lRis~~ 326 (345)
T cd06450 288 SV-----------KLDELNYDLSDRLNE-RGGWHVPATTLG-----------------------------GPNVLRFVVT 326 (345)
T ss_pred cc-----------hhhHHHHHHHHHHHh-cCCEEEEeeEEC-----------------------------CeEEEEEEec
Confidence 10 011235678888865 555444332111 1478999998
Q ss_pred CC-CCHHHHHHHHHHHHH
Q 043646 502 YY-MSNEEFEFILAALEF 518 (625)
Q Consensus 502 ~~-~t~edid~ll~aL~~ 518 (625)
.+ +|++|+++++++|++
T Consensus 327 ~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 327 NPLTTRDDADALLEDIER 344 (345)
T ss_pred CCCCCHHHHHHHHHHHHh
Confidence 76 599999999999975
No 34
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-28 Score=254.38 Aligned_cols=346 Identities=16% Similarity=0.153 Sum_probs=264.0
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
.+.++.|++++...+. ++.+..+..++.++.+.++..++++..+.++++|+|+.+ +...+..+
T Consensus 14 ~~v~~~V~~am~~~~~----------~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~a-mEAav~sl------ 76 (383)
T COG0075 14 VPVPPRVLLAMARPMV----------GHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLA-MEAAVASL------ 76 (383)
T ss_pred CCCCHHHHHHhcCCCC----------CCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHH-HHHHHHhc------
Confidence 5567778777754331 235677899999999999999999865467777666555 55555554
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhH--HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNL--LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
++|||+ |++.....++.. ..++..|++++.+...+...+|+++++++|+++ +..++|.++|+.+
T Consensus 77 ---------~~pgdk--VLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~---~~~~~V~~vH~ET 142 (383)
T COG0075 77 ---------VEPGDK--VLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKD---PDIKAVAVVHNET 142 (383)
T ss_pred ---------cCCCCe--EEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC---CCccEEEEEeccC
Confidence 589997 555444444433 235667999999999888889999999999953 5788999999999
Q ss_pred ccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCc
Q 043646 245 VTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPS 324 (625)
Q Consensus 245 ~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~ 324 (625)
+||+..|+++|+++|++||++++||+++++|..++++++| ++|+++.+.+|++++|.|+|++.++++... .+...
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~e--~~~~~ 217 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERALE--AIEER 217 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHHH--HHhcC
Confidence 9999999999999999999999999999999999999999 999999999999999999999999998732 22111
Q ss_pred ccCCceEEeeccccccccccccchhh-hhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE
Q 043646 325 TCGGGTVNYVNAFDEKDTLYLEDIEE-RENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI 401 (625)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~-~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv 401 (625)
... +|+.+...+....+. +....||++..+. ..+++.+ ...|.+++.+|.+.+++++++.+.++ |+
T Consensus 218 ~~~--------~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~al-Gl 286 (383)
T COG0075 218 KHP--------SFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI--LEEGLEARIARHRRLAEALRAGLEAL-GL 286 (383)
T ss_pred CCC--------ceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 100 112233333333333 4566788877664 4566666 56789999999999999999999998 99
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHH
Q 043646 402 QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIR 481 (625)
Q Consensus 402 ~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~ 481 (625)
+++. .+..++++++-...|. +++..++...+.+++||.+.+|...
T Consensus 287 ~~~~-~~~~~s~tvta~~~P~--------------g~~~~~~~~~~~~~~g~~i~gg~~~-------------------- 331 (383)
T COG0075 287 ELFA-DPERRSPTVTAIKVPE--------------GVDDKKVRRALLKEYGVEIAGGQGP-------------------- 331 (383)
T ss_pred cccc-CcccCCCceEEEECCC--------------CCCcHHHHHHHHHhCCEEecccccc--------------------
Confidence 9988 3456777776666553 2344455556778899999766421
Q ss_pred HHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 482 SAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 482 ~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
++...+||+.--+.+.+|+...+.+|+.++.+.
T Consensus 332 ---------l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 332 ---------LKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ---------cCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 135789999755899999999999999998775
No 35
>PLN03032 serine decarboxylase; Provisional
Probab=99.97 E-value=1.4e-28 Score=258.84 Aligned_cols=324 Identities=15% Similarity=0.119 Sum_probs=233.2
Q ss_pred HHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhh
Q 043646 92 YIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRD 170 (625)
Q Consensus 92 ~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (625)
.+++++...+...++||.+. +..+..+.++++++++++++++|+++++ ..+||++||.+++..+..+..
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~-~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~--------- 107 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIE-SNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGRE--------- 107 (374)
T ss_pred HHHHHHHHhcccCCCCCccc-CCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHH---------
Confidence 46777888887778999884 5677889999999999999999998763 248997777777766654432
Q ss_pred hhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccccc
Q 043646 171 KLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS 250 (625)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~ 250 (625)
..+++ +|+++..+|+|+.++++..|.+++.||++.+|.+|+++|+++|+++ ..+|.+|++++++|+||.++
T Consensus 108 -----~~~~~--~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~--~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 108 -----VFPDG--ILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKN--RDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred -----hCCCc--EEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHc--CCCCEEEEEEecCcCCccCC
Confidence 12333 6999999999999999999999999999999999999999999842 13688999999999999999
Q ss_pred CHHHHHHHHHHcC-----CEEEEeccCcCCCccccCCC--C-CCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCC
Q 043646 251 DTRSIARLLHQYG-----GFACFDFAASGPYVKINLRS--R-NIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSP 322 (625)
Q Consensus 251 ~l~~I~~la~~~g-----~~vivD~A~~~g~~~id~~~--~-~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~ 322 (625)
|+++|+++|+++| +|+|+|+|++++..++.... . ...++|++++|+|||+|.|.|+|++++++.. +..+.
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~--~~~~~ 256 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALS 256 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh--hHhhc
Confidence 9999999999996 59999999998887752210 0 0126999999999999889999999999876 22221
Q ss_pred CcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 323 PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
.. ..| +...... ..|+.+-...+ -+.+... ...|+..+.+++.++++++.++|++. +
T Consensus 257 ~~------~~Y-----------l~~~d~t-i~gSR~g~~~l~~w~~l~~~--G~~g~~~~~~~~~~~a~~l~~~l~~~-~ 315 (374)
T PLN03032 257 QN------VEY-----------LNSRDAT-IMGSRNGHAPLYLWYTLRRK--GYRGIKRDVQHCMRNAHYLKDRLTEA-G 315 (374)
T ss_pred cC------Ccc-----------cCCCCCc-ccCCCchHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 00 011 1000001 12333321111 1222222 45567788899999999999999886 6
Q ss_pred EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHH
Q 043646 401 IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 401 v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~ 480 (625)
++++.++ ...+++|..... .. +.+ |-.+.+
T Consensus 316 ~~~~~~p---~~~~V~f~~~~~------------------~~----~~~--~w~l~~----------------------- 345 (374)
T PLN03032 316 LTCRLNE---LSSTVVFERPMD------------------EA----FIK--KWQLAC----------------------- 345 (374)
T ss_pred CcEEECC---CceEEEEcCCCc------------------Hh----Hhh--eeeecc-----------------------
Confidence 6665442 344555443210 11 212 333321
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
.++++||.+.+.++.+.+|.|++.|++
T Consensus 346 -----------~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 346 -----------EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred -----------cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 135799999988999999999998875
No 36
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=1.4e-28 Score=262.44 Aligned_cols=325 Identities=13% Similarity=0.071 Sum_probs=229.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh--
Q 043646 118 RMTKMVHEASNYIKRCLGGGQA-DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN-- 194 (625)
Q Consensus 118 ~~~~~~~~~~~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-- 194 (625)
.+.+.++++++.+++++|++++ +.+++++ +++.++..++..+ +.++++ |++....++..
T Consensus 34 ~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~-~gt~~l~~~~~~l---------------~~~~~~--vlv~~~~~~~~~~ 95 (368)
T PRK13479 34 DFNALTASVRAKLVAIATGEEGYTCVPLQG-SGTFSVEAAIGSL---------------VPRDGK--VLVPDNGAYGARI 95 (368)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcC-CcHHHHHHHHHhc---------------cCCCCe--EEEEeCCchHHHH
Confidence 3456889999999999999754 3577884 5555677776665 356665 55544444333
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 195 LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
....+..|++++.++.+.++.+|++++++++++. +++++|.+++++|+||.+.|+++|+++||++|+++++|+++++
T Consensus 96 ~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~ 172 (368)
T PRK13479 96 AQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAAD---PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF 172 (368)
T ss_pred HHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhC---CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc
Confidence 2445668999999999877789999999998742 4678999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 275 PYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 275 g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
|..++++..+ ++|++++|+|||+++|.|+|++++++++ ++.+.+.... ..++.... ..........++
T Consensus 173 g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~~~--~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~-- 240 (368)
T PRK13479 173 GAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARRSE--LEACKGNSRS-LSLDLYDQ----WAYMEKTGQWRF-- 240 (368)
T ss_pred CCcccccccc---CceEEEecCccccccCCCceEEEECHHH--HHHhhcCCCC-eeecHHHH----HhhhcccCCCCC--
Confidence 9888888877 7899999999999889889999999887 3333221110 00000000 000000011112
Q ss_pred CChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcce-EEEEeccCCCCCCcccc
Q 043646 355 GTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAI-LSFLVYSTTNSSPENMK 431 (625)
Q Consensus 355 gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i-~~f~~~~~~~~~~~~~~ 431 (625)
|+++..++ .++++.+. +..+.+++.++...+++++++.|.++ |++++.+. ..+.+. ++|.. +..
T Consensus 241 -t~~~~~~~~l~~al~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~-~~~-------- 307 (368)
T PRK13479 241 -TPPTHVVAAFYQALLELE-EEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDA-EIQSPIIVTFHA-PAD-------- 307 (368)
T ss_pred -CCcHHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCc-hhcCceEEEEEC-CCC--------
Confidence 55554433 45555542 33467888889999999999999887 77776542 223444 44443 221
Q ss_pred ccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHH
Q 043646 432 IERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEF 511 (625)
Q Consensus 432 ~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ 511 (625)
..++..++.+.|.+ .||.+++|..+. .+++||+...+++++|+++
T Consensus 308 ----~~~~~~~l~~~L~~-~gi~v~~g~~~~------------------------------~~~iRis~~~~~t~edi~~ 352 (368)
T PRK13479 308 ----PAYDFKEFYERLKE-QGFVIYPGKLTQ------------------------------VDTFRIGCIGDVDAADIRR 352 (368)
T ss_pred ----CCcCHHHHHHHHHH-CCEEEecCCCCC------------------------------CCEEEEecCCCCCHHHHHH
Confidence 12345678888855 699998763221 3679999877899999999
Q ss_pred HHHHHHHHHHhh
Q 043646 512 ILAALEFIAAYG 523 (625)
Q Consensus 512 ll~aL~~~~~~~ 523 (625)
++++|++++.+.
T Consensus 353 ~l~~L~~~l~~~ 364 (368)
T PRK13479 353 LVAAIAEALYWM 364 (368)
T ss_pred HHHHHHHHHHHc
Confidence 999999987653
No 37
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.97 E-value=7.5e-29 Score=241.97 Aligned_cols=381 Identities=19% Similarity=0.224 Sum_probs=280.9
Q ss_pred ChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcch-hhHHHHHHHHHHHH
Q 043646 50 PSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSY-VGQRMTKMVHEASN 128 (625)
Q Consensus 50 ~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~-~~~~~~~~~~~~~~ 128 (625)
+..+-+..+|..|..- .+.+|||.++.|..|+.+.+...+.....|+.-....+. ....+.++-+.+-.
T Consensus 14 Da~dpl~~lr~~f~lp----------~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgd 83 (407)
T COG3844 14 DAADPLAKLRDRFALP----------GGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGD 83 (407)
T ss_pred cccCchhhhHhhccCC----------CCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHH
Confidence 3445667777777433 579999999999998665555544443222221111111 11234566777889
Q ss_pred HHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEE
Q 043646 129 YIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEI 208 (625)
Q Consensus 129 ~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v 208 (625)
+++.++|+.++ +|+.+ .+++.+|+.++.+.- ..++|++ +|+....++++-.....- -+++..+
T Consensus 84 klApLiGA~~~-Evvv~-dtts~nl~k~L~aal-------------r~~~~r~-vIv~E~~~fpTdly~a~g-~~~~~~~ 146 (407)
T COG3844 84 KLAPLIGARAG-EVVVT-DTTSINLFKVLAAAL-------------RPQEGRR-VIVSEGDNFPTDLYIAEG-LADLLGI 146 (407)
T ss_pred HhhhhhcCCCC-ceEEe-CCcchHHHHHHHHHh-------------ccCCCce-EEeecCCCCCcchhhhcc-hhhhhcc
Confidence 99999999988 88888 678887777665541 1344554 555555666665544321 1122222
Q ss_pred ecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCC
Q 043646 209 GLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDG 288 (625)
Q Consensus 209 ~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~ 288 (625)
..+-.+.+.+.+++++++ +++.+|++++++.-||...|+.+|..++|++|+++++|-||++|.++++++.+ |
T Consensus 147 ~~~~~~~~~P~~~~~~~~-----dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---g 218 (407)
T COG3844 147 GYDLEGVIAPRALEEAIT-----DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---G 218 (407)
T ss_pred cccceeeeChHHHHHhhc-----cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeeccc---C
Confidence 223345567889999998 68999999999999999999999999999999999999999999999999998 9
Q ss_pred CcEEEEcCCCCC-CCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HH
Q 043646 289 YDAIFLATHKFL-GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RA 365 (625)
Q Consensus 289 ~D~v~~S~hK~l-ggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~a 365 (625)
+||.+.+.||++ |||++++++++.++. .+...|...||+. ...+|.+.......+...+|..||+++.+.. ..
T Consensus 219 aDfaigcsyKYLNgGPGapa~l~v~~~h--~e~~~~~lsgW~g--ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~ 294 (407)
T COG3844 219 ADFAIGCSYKYLNGGPGAPAGLFVAPRH--RERSWPPLSGWWG--HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEG 294 (407)
T ss_pred CCeeeeeeceeccCCCCCceeEEecccc--ccccccccccccC--CCCcchhhhccCcCccccceeeCCcchhhhHHHhh
Confidence 999999999999 678889999999988 4455566667655 2333333322233344678999999988764 46
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC-C--cEEEeCCCC-CCCcceEEEEeccCCCCCCccccccCCCCCChH
Q 043646 366 ALAFWVKEYIGYEVIKKQEDVYIESALGRILPN-Q--NIQVLGNTS-VKRQAILSFLVYSTTNSSPENMKIERNKPLHGP 441 (625)
Q Consensus 366 al~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l-~--gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~ 441 (625)
+++.+ ...++..++++...|+.++.+.+... + ++++.+|.+ +.|++.++|.... ..
T Consensus 295 aLDif--a~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~------------------~~ 354 (407)
T COG3844 295 ALDIF--ADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH------------------GY 354 (407)
T ss_pred hhhhh--hhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc------------------HH
Confidence 77777 56789999999999999999988653 3 789998876 6899999998753 56
Q ss_pred HHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHH
Q 043646 442 FVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITF-PYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 442 ~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~-~~~~t~edid~ll~aL~~~~ 520 (625)
.|++.|.+ +||...- ..|+.+|+.| ++|++.+||-..+++|++++
T Consensus 355 ~V~qaLi~-rGVigD~---------------------------------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL 400 (407)
T COG3844 355 QVMQALID-RGVIGDF---------------------------------REPDVLRFGFTPLYVSFVDVWDAVDALEEVL 400 (407)
T ss_pred HHHHHHHH-cCccccc---------------------------------cCCCeeeecCccceechhHHHHHHHHHHHHH
Confidence 89999966 6886431 1479999999 69999999999999999998
Q ss_pred Hhh
Q 043646 521 AYG 523 (625)
Q Consensus 521 ~~~ 523 (625)
..+
T Consensus 401 ~t~ 403 (407)
T COG3844 401 DTL 403 (407)
T ss_pred Hhh
Confidence 764
No 38
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.97 E-value=5e-28 Score=258.42 Aligned_cols=333 Identities=15% Similarity=0.083 Sum_probs=236.7
Q ss_pred eccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 043646 80 YADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEV 159 (625)
Q Consensus 80 Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (625)
+|+.+. +++.+.+.+++.+++....+++.. + .....+.+++++++++++|.+++ .++|+++| ++++..++.+
T Consensus 24 ~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~la~~~g~~~~-~~~~~~gg-t~a~~~a~~~ 95 (371)
T PRK13520 24 ILSSMC-TEPHPIARKAHEMFLETNLGDPGL--F---PGTAKLEEEAVEMLGELLHLPDA-YGYITSGG-TEANIQAVRA 95 (371)
T ss_pred eeeeee-cCchHHHHHHHHHHHhcCCCCccc--C---ccHHHHHHHHHHHHHHHhCCCCC-CeEEecCc-HHHHHHHHHH
Confidence 566655 445567778888877654455432 1 23566778999999999998765 67887444 4445444443
Q ss_pred h-cccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEE
Q 043646 160 M-GITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGS 238 (625)
Q Consensus 160 l-~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~ 238 (625)
+ .. ...+++ .|+++..+|+++....+..|++++.+|.+.++.+|+++|+++++ +++++|+
T Consensus 96 ~~~~------------~~~~~~--~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~~~~vi 156 (371)
T PRK13520 96 ARNL------------AKAEKP--NIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-----DNTIGIV 156 (371)
T ss_pred HHhh------------ccCCCc--eEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-----hCCEEEE
Confidence 3 10 012455 49999999999888888889999999998888999999999998 4688888
Q ss_pred EecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc-------cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEE
Q 043646 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI-------NLRSRNIDGYDAIFLATHKFLGGPGTPGILLI 311 (625)
Q Consensus 239 ~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i-------d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v 311 (625)
+++++|+||.+.|+++|+++|+++|+++++|+||+.+..+. ++.. .++|++++++|||.++|.++|++++
T Consensus 157 ~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~---~~vd~~~~s~~K~~~a~~~~G~~~~ 233 (371)
T PRK13520 157 GIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL---PGVDSITIDPHKMGLAPIPAGGILF 233 (371)
T ss_pred EEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC---CCCceEEECCccccCccCCceEEEE
Confidence 88899999999999999999999999999999998665332 2222 3789999999999877877888887
Q ss_pred ecc-ccccCCC---CCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHH
Q 043646 312 SKA-LYQLGSS---PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQED 385 (625)
Q Consensus 312 ~~~-~~~l~~~---~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~ 385 (625)
+++ + ++.+ .|...++. +....||++...++ .++++.+ ...|.+.+.++..
T Consensus 234 ~~~~~--~~~l~~~~~~~~~~~--------------------~~~~~gt~~~~~~~~~~~al~~l--~~~g~~~~~~~~~ 289 (371)
T PRK13520 234 RDESY--LDALAVDTPYLTSKK--------------------QATLTGTRSGAGVAATYAVMKYL--GREGYRKVVERCM 289 (371)
T ss_pred cCHHH--HHhhcccCccccCCC--------------------CcceEeeccChHHHHHHHHHhhh--cHhHHHHHHHHHH
Confidence 654 4 2222 12111111 11123555433332 3444443 3457788889999
Q ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh
Q 043646 386 VYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY 465 (625)
Q Consensus 386 ~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~ 465 (625)
++++++.+.|.++ +++++.+. ..++++|... +..++.+.|.+ .||.++.+ .
T Consensus 290 ~~~~~l~~~L~~~-g~~~~~~~---~~~~v~~~~~------------------~~~~v~~~L~~-~gi~v~~~---~--- 340 (371)
T PRK13520 290 ENTRWLAEELKER-GFEPVIEP---VLNIVAFDDP------------------NPDEVREKLRE-RGWRVSVT---R--- 340 (371)
T ss_pred HHHHHHHHHHHhC-CCEEecCC---CceEEEEecC------------------CHHHHHHHHHH-CCceeccC---C---
Confidence 9999999999987 88743321 3455555432 14578888865 59998742 1
Q ss_pred hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 466 GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 466 ~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++|||+++++|++|+++++++|+++++
T Consensus 341 --------------------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 341 --------------------------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred --------------------------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 136799999999999999999999998754
No 39
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=5.8e-28 Score=256.11 Aligned_cols=322 Identities=14% Similarity=0.111 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh-H
Q 043646 118 RMTKMVHEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN-L 195 (625)
Q Consensus 118 ~~~~~~~~~~~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~ 195 (625)
.+.+.++++++.+++++|++++. .++++++| +.++..++..+ +.++++ +|++.+.+|.+. .
T Consensus 28 ~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~g-t~~l~~~~~~~---------------~~~~~~-vi~~~~~~~~~~~~ 90 (355)
T TIGR03301 28 EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSG-TFAVEATIGSL---------------VPRDGK-LLVLINGAYGERLA 90 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCc-HHHHHHHHHhc---------------cCCCCe-EEEECCCchhhHHH
Confidence 34578999999999999998753 57788554 55677776665 356665 466666666553 3
Q ss_pred HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 196 LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
...+..|++++.++.+.++.+|+++++++++++ ++++++++++++|+||.+.|+++|+++|++||+++++|++++.|
T Consensus 91 ~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g 167 (355)
T TIGR03301 91 KICEYLGIPHTDLNFSEYEPPDLNRIEEALAAD---PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFG 167 (355)
T ss_pred HHHHHcCCceEEEecCCCCCCCHHHHHHHHHhC---CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccC
Confidence 445678999999998877889999999999742 46788999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
..++++..+ ++|++++|+|||+++|.|+|++++++++. +.+...... ...+... ...+.. ..+...+
T Consensus 168 ~~~~~~~~~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~~--~~~~~~~~~-~~~~~~~-----~~~~~~--~~~~~~~ 234 (355)
T TIGR03301 168 AIPIDIEEL---DVDALIASANKCLEGVPGFGFVIARRDLL--EASAGNARS-LYLDLYD-----QWAYME--KTGKWRF 234 (355)
T ss_pred Ccccchhhc---CccEEEecCCcccccCCceeEEEECHHHH--HHhhCCCCC-ceeeHHH-----HHHHhh--hcCCCCC
Confidence 888888776 88999999999998888899999999873 222211000 0000000 000000 0011234
Q ss_pred ChhHHHHH--HHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccc
Q 043646 356 TPQIVQMI--RAALAFWVKEYIG-YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKI 432 (625)
Q Consensus 356 t~~~~~~~--~aal~~~~~~~~g-~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~ 432 (625)
|++...+. .++++.+ ...| ++.+.++.+.+++++.+.|.++ +++++.+. ..+.+++.+...+..
T Consensus 235 t~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~~--------- 301 (355)
T TIGR03301 235 TPPTHTVYAFAQALEEL--EAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPE-RWQSPIIVSFLYPDD--------- 301 (355)
T ss_pred CCcHHHHHHHHHHHHHH--HHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCC-CCCCCcEEEEECCCC---------
Confidence 56655443 3455554 2344 7888888899999999999887 77766553 234454433333321
Q ss_pred cCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 043646 433 ERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFI 512 (625)
Q Consensus 433 ~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~l 512 (625)
...+..++.+.|.+ .||.+++|..+. .+++||+++.+++++|++++
T Consensus 302 ---~~~~~~~~~~~l~~-~gi~i~~~~~~~------------------------------~~~iRis~~~~~~~~~i~~~ 347 (355)
T TIGR03301 302 ---PDFDFDDFYQELKE-RGFVIYPGKLTL------------------------------ADTFRIGTIGEIDAADIERL 347 (355)
T ss_pred ---CcchHHHHHHHHHH-CCEEEECCcccc------------------------------ccEEEEecCCCCCHHHHHHH
Confidence 01234578888855 699998764321 27899999889999999999
Q ss_pred HHHHHHH
Q 043646 513 LAALEFI 519 (625)
Q Consensus 513 l~aL~~~ 519 (625)
+++|+++
T Consensus 348 ~~~l~~~ 354 (355)
T TIGR03301 348 LEAIKDA 354 (355)
T ss_pred HHHHHhh
Confidence 9999875
No 40
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.1e-27 Score=256.82 Aligned_cols=349 Identities=16% Similarity=0.150 Sum_probs=242.9
Q ss_pred CCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 043646 84 TASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGIT 163 (625)
Q Consensus 84 ~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (625)
.-.+|+++.+++++.++. ..++||.+..+..+.......+++++.+++++|++ +++|+ +|+++++..++.++
T Consensus 27 ~~~~p~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~---~~~~~-~g~t~a~~~al~~l--- 98 (387)
T PRK09331 27 QRGGILTPEARKALIEYG-DGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD---EARVT-HGAREGKFAVMHSL--- 98 (387)
T ss_pred hcCCCCCHHHHHHHHHHH-hccCCCcccccccccccChHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHh---
Confidence 345899999999999887 34466644223334445567899999999999985 46777 67777787777766
Q ss_pred ccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec--CCCCCCCHHHHHHHHHHhh--hCCCCeEEEE
Q 043646 164 VPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL--DDNGLLDIEALRSQLELYK--AAKRPMLGSF 239 (625)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~--~~~~~ld~~~L~~~l~~~~--~~~~~~lv~~ 239 (625)
+++||+ |+++..+|.+...+++..|++++.++. ++++.+|++++++++++.. ..+++++|++
T Consensus 99 ------------~~~gd~--Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 99 ------------CKKGDY--VVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred ------------cCCCCE--EEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 478885 999999999998888889999999998 6678899999999997421 1237899999
Q ss_pred ecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccC
Q 043646 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLG 319 (625)
Q Consensus 240 ~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~ 319 (625)
++++|+||.+.|+++|+++||++|+++++|+||+.|..+++...+ ++|++++|+||++++|.|+|++++++++. +
T Consensus 165 ~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~---g~D~~~~s~~K~l~~~~~~G~l~~~~~~i--~ 239 (387)
T PRK09331 165 THVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKL---GADFIVGSGHKSMAASAPSGVLATTEEYA--D 239 (387)
T ss_pred ECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECHHHH--h
Confidence 999999999999999999999999999999999999999988876 89999999999999898999999998873 2
Q ss_pred CCCCcccCCceEEeeccccccccccccchhhhhcCCChh--HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 320 SSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ--IVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~--~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
.+...... |... . ...+ .++.. ....+.+++..+... . ...++.+.+++++++.|.+
T Consensus 240 ~~~~~~~~---------~~~~---~----~~~~-~~~~~~~~~~~~~aal~~~~~~---~-~~~~~~~~~~~~l~~~L~~ 298 (387)
T PRK09331 240 KVFRTSRK---------FGVK---E----VELL-GCTLRGAPLVTLMASFPHVVER---V-KRWDEEVKKARWFVDELEK 298 (387)
T ss_pred hcccccCC---------Cccc---c----eeee-ceecCchHHHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHhc
Confidence 22111100 0000 0 0001 11111 111112334333211 1 2344556678899999999
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
++|++++... ....+++.+... ..... ..+....+..+.+.|.+ +||..-.. +
T Consensus 299 l~g~~~~~~~-~~~~~i~~~~~~-~~~~~------~~~~~~~~~~~~~~L~~-~gI~~~~~-------~----------- 351 (387)
T PRK09331 299 IEGFKQLGEK-PRNHDLMKFETP-SFDEI------AKKHKRRGFFLYEELKK-RGIHGIKP-------G----------- 351 (387)
T ss_pred CCCEEEeccC-cCcCCeEEEeCC-chhHH------hhhccccchhHHHHHHH-cCceEEcc-------C-----------
Confidence 9999998632 112344444322 11000 00112234578888854 69973210 0
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
....+|+.. ..++++|+++++++|++++.+
T Consensus 352 --------------~~~i~ri~~-~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 352 --------------ATKEFKLST-YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred --------------CceEEEEEe-ccCCHHHHHHHHHHHHHHHHh
Confidence 124566665 337999999999999998765
No 41
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.97 E-value=1.2e-28 Score=259.25 Aligned_cols=335 Identities=13% Similarity=0.117 Sum_probs=236.7
Q ss_pred cchHHHHHHHHHhhCCCCCCCCCCcch---hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 88 RSLRYIEDYIINNVLPFYGNTHTSDSY---VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~~n~~~~~~~---~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
..|..|++++.+++..+. |.+.+.+. .+..+.++++++++.++++++++.+++|+|+.+++|.++..++..+
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl---- 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL---- 76 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc----
Confidence 468899999999987665 77765553 3445568999999999999998554578888555788899988876
Q ss_pred cchhhhhhhhccCCCCceEE-EEcCCCCchhHHHHHHcCCeEEEEecCC----CCCCCHHHHHHHHHHhhhCCCCeEEEE
Q 043646 165 PSIMRDKLITSLRDEERWVV-FLGPYEHHSNLLSWRQSLAEVVEIGLDD----NGLLDIEALRSQLELYKAAKRPMLGSF 239 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~V-lv~~~~h~s~~~~~~~~G~~vv~v~~~~----~~~ld~~~L~~~l~~~~~~~~~~lv~~ 239 (625)
+.++++..+ ..+...|.. ....+..|+ ++.+..++ ...+++++++ ++ +++++|++
T Consensus 77 -----------~~~~~~~l~i~~G~fg~r~-~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~v~~ 136 (349)
T TIGR01364 77 -----------LAEGKVADYIVTGAWSKKA-AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--IS-----EDAAYVHY 136 (349)
T ss_pred -----------CCCCCeEEEEECCHHHHHH-HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CC-----CCCCEEEE
Confidence 456776222 223333333 234556788 77777542 2356666554 22 57899999
Q ss_pred ecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccC
Q 043646 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLG 319 (625)
Q Consensus 240 ~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~ 319 (625)
+|+.|.||+..| ++++.++++++||+++++|+.++|++++ |++++|.||+|| |.|+|++++++++ ++
T Consensus 137 th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~~~-----d~~~~ssqK~lg-P~Glg~l~~s~~~--~~ 203 (349)
T TIGR01364 137 CANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVSKF-----GLIYAGAQKNIG-PAGLTVVIVRKDL--LG 203 (349)
T ss_pred cCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHHHc-----cEEEEecccccC-CCceEEEEECHHH--Hh
Confidence 999999999877 6677789999999999999999999865 699999999997 9999999999998 44
Q ss_pred CCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHhhC
Q 043646 320 SSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYI-GYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~l~~~L~ 396 (625)
.+.|... ... .+..........|||++..+. .++++++ ..+ |++.+.+|++.+++++++.|+
T Consensus 204 ~~~~~~~--~~~-----------~~~~~~~~~~~~~Tp~~~~i~al~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~ 268 (349)
T TIGR01364 204 RASRITP--SML-----------NYKIHAENDSMYNTPPTFAIYVSGLVFKWL--KEQGGVKAIEKRNQAKAQLLYDTID 268 (349)
T ss_pred hcccCCC--Ccc-----------hHHHHHhcCCCCCCCcHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4544211 000 000000112335899988875 4667776 566 799999999999999999999
Q ss_pred CCCcEEEeCCCCCCCc-ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChh
Q 043646 397 PNQNIQVLGNTSVKRQ-AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 397 ~l~gv~v~~~~~~~~~-~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~ 475 (625)
+++|+.........+. .+++|.+... .+ ..++...+ .+.||.+..|..
T Consensus 269 ~~~gl~~~~~~~~~rs~~v~sf~~~~~--------------~~-~~~~~~~~-~~~Gi~~~~~~~--------------- 317 (349)
T TIGR01364 269 NSNGFYRNPVDPRNRSRMNVVFTLGNE--------------EL-EKRFLKEA-EERGLVSLKGHR--------------- 317 (349)
T ss_pred hCCCeeccCCCHHHcCCeEEEEecCCh--------------hH-hHHHHHHH-HHCCCcccCCcc---------------
Confidence 9988655532212355 4577775321 11 12343444 235665443321
Q ss_pred hHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 476 RSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..+.+|+|+.+|+|.+|||+++++|+++.++
T Consensus 318 ----------------~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 318 ----------------SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ----------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1378999999999999999999999987653
No 42
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=1.9e-27 Score=254.19 Aligned_cols=353 Identities=16% Similarity=0.085 Sum_probs=238.7
Q ss_pred HHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 043646 52 EEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIK 131 (625)
Q Consensus 52 ~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia 131 (625)
++.+++|++.+-+. .|++.+. +|++.+..+. +.+.+++...+....++++. + ....++.++++++++
T Consensus 3 ~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~la 69 (373)
T TIGR03812 3 EEVLEELKEYRSED-----LKYSDGR--ILGSMCTNPH-PIAVKAYDMFIETNLGDPGL--F---PGTKKIEEEVVGSLG 69 (373)
T ss_pred HHHHHHHHHHHhcC-----CCCCCCc--EEEEEeCCch-HHHHHHHHHHhhcCCCCccc--C---ccHHHHHHHHHHHHH
Confidence 56778888866443 2333222 3444444443 34567776665544455542 1 234577889999999
Q ss_pred HHhCCCCCCcEEEeCChHHHHHHHHHHHhc-ccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 132 RCLGGGQADAIIFCGAGTTAAIKRLQEVMG-ITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 132 ~~~g~~~~~~vift~sGttaal~~l~~~l~-~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
+++|++++ .++++ +|++.++..++.++. +.. .-.+|++ |+++..+|+++...++..|++++.++.
T Consensus 70 ~~~g~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~----------~~~~g~~--vl~~~~~h~~~~~~~~~~G~~~~~v~~ 135 (373)
T TIGR03812 70 NLLHLPDA-YGYIV-SGGTEANIQAVRAAKNLAR----------EEKRTPN--IIVPESAHFSFEKAAEMLGLELRYAPL 135 (373)
T ss_pred HHhCCCCC-CeEEe-ccHHHHHHHHHHHHHHHHh----------ccCCCcE--EEECCcchHHHHHHHHHcCCeEEEEee
Confidence 99999766 56666 445555544444331 000 0024554 999999999988888889999999999
Q ss_pred CCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc----------ccc
Q 043646 211 DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV----------KIN 280 (625)
Q Consensus 211 ~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~----------~id 280 (625)
+.++.+|+++|+++++ +++..+++.+++|+||.+.|+++|+++||++|+++++|+||+.+.. +++
T Consensus 136 ~~~~~~d~~~l~~~l~-----~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 136 DEDYTVDVKDVEDLID-----DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred CCCCCcCHHHHHHHHh-----hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 8888899999999997 3565445555789999999999999999999999999999975543 233
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCceEEEE-eccccccCCCC---CcccCCceEEeeccccccccccccchhhhhcCCC
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPGTPGILLI-SKALYQLGSSP---PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT 356 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v-~~~~~~l~~~~---p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt 356 (625)
+... ++|++++++|||+.+|.++|++++ ++++ ++.+. |+..+. ......||
T Consensus 211 ~~~~---~~d~~~~s~~K~~~~~~~~G~~~~~~~~~--~~~l~~~~~~~~~~--------------------~~~~~~gt 265 (373)
T TIGR03812 211 FSLP---GVQSITIDPHKMGLSPIPAGGILFRSKSY--LKYLSVDAPYLTVK--------------------KQATITGT 265 (373)
T ss_pred ccCC---CCCEEEECccccCCCcCCceEEEEeCHHH--HhhhcccCcccCCC--------------------CCcceEee
Confidence 3322 789999999998777777776665 5554 22221 111110 01122367
Q ss_pred hhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccC
Q 043646 357 PQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIER 434 (625)
Q Consensus 357 ~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~ 434 (625)
++...++ .++++.+ ...|++.+.++..++++++++.|++++...++.+ ..++++|....
T Consensus 266 ~~~~~~~~~~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~~~v~~~~~~------------- 326 (373)
T TIGR03812 266 RSGASAAATYAVIKYL--GREGYRKIVAECMENTRYLVEELKKIGFEPVIEP----VLNIVAFEVDD------------- 326 (373)
T ss_pred chhHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC----CceEEEEEeCC-------------
Confidence 6655543 3444443 4567888899999999999999998843334432 34555554321
Q ss_pred CCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 043646 435 NKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILA 514 (625)
Q Consensus 435 ~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~ 514 (625)
..++.+.|.+ .||.++.+. .++++||+++.++|++|++++++
T Consensus 327 -----~~~v~~~L~~-~gi~v~~~~--------------------------------~~~~iRis~~~~~t~edid~l~~ 368 (373)
T TIGR03812 327 -----PEEVRKKLRD-RGWYVSVTR--------------------------------CPKALRIVVMPHVTREHIEEFLE 368 (373)
T ss_pred -----HHHHHHHHHH-CCceeccCC--------------------------------CCCEEEEEEECCCCHHHHHHHHH
Confidence 3478888865 699987431 13789999999999999999999
Q ss_pred HHHH
Q 043646 515 ALEF 518 (625)
Q Consensus 515 aL~~ 518 (625)
+|++
T Consensus 369 ~L~~ 372 (373)
T TIGR03812 369 DLKE 372 (373)
T ss_pred HHhh
Confidence 9985
No 43
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=5.4e-28 Score=277.81 Aligned_cols=352 Identities=17% Similarity=0.110 Sum_probs=252.4
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH----HHHHHHHHHhcccccchhhhhhhhccCC-CC--ceEEEEcC
Q 043646 116 GQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTT----AAIKRLQEVMGITVPSIMRDKLITSLRD-EE--RWVVFLGP 188 (625)
Q Consensus 116 ~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtt----aal~~l~~~l~~~~~~~~~~~~~~~l~~-gd--~~~Vlv~~ 188 (625)
..++.+++.++++++++++|. ++|+|+. +++ .+++.++.++ +++ || +.+|+++.
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~---~~v~f~p-naga~ge~a~~~vi~~~---------------~~~~Gd~~r~~vli~~ 623 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGF---DSFSLQP-NAGAAGEYAGLMVIRAY---------------HLSRGDHHRNVCIIPV 623 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCC---CeEEEcC-CCcHHHHHHHHHHHHHH---------------HhccCCCCCCEEEeCC
Confidence 456778999999999999999 3899985 455 4677776666 223 44 45799999
Q ss_pred CCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEE
Q 043646 189 YEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (625)
Q Consensus 189 ~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~viv 268 (625)
.+|.++..+|...|++++.|+.+.+|.+|+++|+++++.+ .+++++|++++++|.+|...|+++|+++||++|+++++
T Consensus 624 ~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~--~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~v 701 (993)
T PLN02414 624 SAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAH--KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYM 701 (993)
T ss_pred CcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhcc--CCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEE
Confidence 9999999999999999999999999999999999999831 13689999999999999999999999999999999999
Q ss_pred eccCcCCC-ccccCCCCCCCCCcEEEEcCCCCCCCCCC-----ceEEEEeccccccCCCCCcccCCceEEeecccccccc
Q 043646 269 DFAASGPY-VKINLRSRNIDGYDAIFLATHKFLGGPGT-----PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDT 342 (625)
Q Consensus 269 D~A~~~g~-~~id~~~~~~~~~D~v~~S~hK~lggp~g-----~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (625)
|+|+..+. ...+..++ |+|++++|.||+|++|.| +|++++++.+ . |..+|+.... ..++
T Consensus 702 DgAq~~a~~~l~~p~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L--~----p~lPg~~v~~-~~~~----- 766 (993)
T PLN02414 702 DGANMNAQVGLTSPGFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL--A----PFLPSHPVVP-TGGI----- 766 (993)
T ss_pred EecCHHhccCcCCcccc---CCCEEEecCCccCCcCcccCCCCeeeEEEchhh--c----ccCCCCcccc-CCCc-----
Confidence 99999887 34455566 999999999999987754 8999999876 2 3333322100 0000
Q ss_pred ccccchhhhhc---CCChhH-----HHHHHHHHHHHHHhhcCHHHH---HHHHHHHHHHHHHhhCCCCcEEEeCCCCCCC
Q 043646 343 LYLEDIEEREN---GGTPQI-----VQMIRAALAFWVKEYIGYEVI---KKQEDVYIESALGRILPNQNIQVLGNTSVKR 411 (625)
Q Consensus 343 ~~~~~~~~~~~---~gt~~~-----~~~~~aal~~~~~~~~g~~~i---~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~ 411 (625)
..|+. .||.+. ..++..+..++ ..+|.+.+ .++...+++|+.++|.+..++.+.++.+ ..
T Consensus 767 ------~~r~~~s~iGt~~~a~~g~al~l~~A~~yi--~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~-~~ 837 (993)
T PLN02414 767 ------PRPEKTQPLGTISAAPWGSALILPISYTYI--AMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNG-TC 837 (993)
T ss_pred ------ccccCCCCcCCccchhhhhHHHHHHHHHHH--HHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCC-Ce
Confidence 01111 355221 12233444554 45565544 8888999999999998754554444321 00
Q ss_pred cceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCC
Q 043646 412 QAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGV 491 (625)
Q Consensus 412 ~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~ 491 (625)
..-+.+-+. .. +...+++..++++.|. ++||....-.+ |
T Consensus 838 ~hEfv~~~~-~l---------~~~~g~~~~di~krL~-d~Gihapt~~~---p--------------------------- 876 (993)
T PLN02414 838 AHEFIIDLR-PF---------KNTAGIEPEDVAKRLM-DYGFHAPTMSW---P--------------------------- 876 (993)
T ss_pred eeeEEEecc-cc---------ccccCCCHHHHHHHHH-HcCcEEeeecc---c---------------------------
Confidence 001111111 10 1123456788999998 48998754221 1
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccccchh------hhhhh-hcccccCCc
Q 043646 492 KPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLYHFNVKAGNWCSSQKAIK------DLIDK-ETNNNINNP 561 (625)
Q Consensus 492 ~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~~~~~y~~~~~~~~w~~~~~~~~------~~~~~-~~~~~~~~~ 561 (625)
.++.+||+++.+++++|+|+|+++|+.+..+... +++|.|...++.|| .+++. +|-..|+..
T Consensus 877 v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~--------~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~ 945 (993)
T PLN02414 877 VPGTLMIEPTESESKAELDRFCDALISIREEIAD--------IENGKADRENNVLKGAPHPPSLLMADKWDKPYSRE 945 (993)
T ss_pred cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH--------HhcCCCCCCCchhhcCCCChHHhhcCCCCCCcChh
Confidence 1488999999999999999999999999988654 78888888888877 34554 686555443
No 44
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=259.57 Aligned_cols=342 Identities=12% Similarity=0.102 Sum_probs=237.9
Q ss_pred ccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcc---hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 81 ADHTASGRSLRYIEDYIINNVLPFYGNTHTSDS---YVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 81 ld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~---~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
|=+++.+..|+.|.+++.+.+..+. +.+.+.+ +.+..+.++++++++.+++++|++.+.+++|+.+++++++..++
T Consensus 6 l~~pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~ 84 (360)
T PRK05355 6 NFSAGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVP 84 (360)
T ss_pred eccCCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHH
Confidence 3356667889999999988875432 4333322 34555669999999999999998544467777667777788776
Q ss_pred HHhcccccchhhhhhhhccCCCCce-EEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHH-HHHHhhhCCCC
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERW-VVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRS-QLELYKAAKRP 234 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~-~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~-~l~~~~~~~~~ 234 (625)
..+ +.+|++. +|+.+..+|.+. ...+..|.. +.+..++ .+..+..++++ +|+ +++
T Consensus 85 ~nl---------------~~~g~~~l~i~~G~fg~r~~-~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-----~~~ 142 (360)
T PRK05355 85 MNL---------------LGGGKKADYVDTGSWSKKAI-KEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-----DDA 142 (360)
T ss_pred Hhc---------------CCCCCeEEEEECCHHHHHHH-HHHHHhCCc-eEEecccccCCCCCCChhhccCC-----CCC
Confidence 665 5677652 223334444443 345566865 6666554 45555555555 665 468
Q ss_pred eEEEEecccCcccccc-CHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEec
Q 043646 235 MLGSFSACSNVTGIYS-DTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK 313 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~-~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~ 313 (625)
++|+++|+.|.||... |+++| +|++++||+++++|+.++|++++ |++++|.||+|| |.|+|++++++
T Consensus 143 ~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~~~-----d~~~~ssqK~lg-P~Glg~l~~s~ 210 (360)
T PRK05355 143 AYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVSKF-----GLIYAGAQKNIG-PAGLTIVIVRE 210 (360)
T ss_pred CEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHHHc-----cEEEEecccccc-CCceEEEEECH
Confidence 9999999999999998 77776 89999999999999999999865 699999999997 99999999999
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhc-CHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYI-GYEVIKKQEDVYIES 390 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~ 390 (625)
++ ++.+.|.. + +..++. .+ .......|||++..+. .++++++ ..+ |.+.+.+|++.++++
T Consensus 211 ~~--l~~~~~~~-~-~~~~~~--------~~---~~~~~~~~Tp~~~~i~aL~~aL~~i--~~~gG~e~i~~r~~~l~~~ 273 (360)
T PRK05355 211 DL--LGRALPSI-P-SMLDYK--------TH---ADNDSMYNTPPTFAIYLAGLVFKWL--KEQGGVAAMEKRNQEKAAL 273 (360)
T ss_pred HH--HhhcccCC-C-hHHHHH--------HH---HhcCCccCCCcHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHH
Confidence 98 44555531 1 121111 00 1122345899988876 4667776 567 899999999999999
Q ss_pred HHHhhCCCCcEEEeCCCCCCCc-ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQ-AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTL 469 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~-~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~ 469 (625)
+++.|++++.+..+.+. ..+. .+++|.+... ....++...+. +.||.+..|..
T Consensus 274 l~~~l~~~~~~~~~~~~-~~rs~~v~sf~~~~~---------------~~~~~~~~~~~-~~Gi~~~~~~~--------- 327 (360)
T PRK05355 274 LYDAIDSSDFYRNPVAP-EDRSRMNVPFTLADE---------------ELDKKFLAEAK-AAGLVGLKGHR--------- 327 (360)
T ss_pred HHHHHHhCCCcccCCCh-hhcCCcEEEEEcCCh---------------HHHHHHHHHHH-HCCCcccCCCC---------
Confidence 99999998643333321 2355 5678776331 11123333332 24555432211
Q ss_pred hcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 470 LAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 470 l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..|.+|+|+++|+|.+|||+|+++|++++..
T Consensus 328 ----------------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 328 ----------------------SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred ----------------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1378999999999999999999999997654
No 45
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.96 E-value=3.3e-28 Score=257.78 Aligned_cols=343 Identities=11% Similarity=0.103 Sum_probs=236.9
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
...++.|.+++......... .++.+..+.+.++++++.+++++|++++++|+|+.+++|.++..++..+
T Consensus 12 ~~~~~~v~~a~~~~~~~~~~-----~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l------ 80 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASLFG-----TSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL------ 80 (361)
T ss_pred cCCCHHHHHHHHhcCccccc-----cCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc------
Confidence 45667788887643211111 1235567889999999999999999655478886456777888887765
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc---CCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEeccc
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS---LAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACS 243 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~---G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~ 243 (625)
+.+ + .+++...+|.+....+... +.++..++.+.+..++.+ +. +++++|+++|++
T Consensus 81 ---------~~~-~--~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~lV~~~h~e 138 (361)
T TIGR01366 81 ---------IEK-K--SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEPQ-----AD-----PGVDVIAWAHNE 138 (361)
T ss_pred ---------ccc-c--ccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCCc-----cC-----CCCCEEEEcccC
Confidence 222 2 2455556666554443321 337777777654444431 22 589999999999
Q ss_pred CccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCC
Q 043646 244 NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPP 323 (625)
Q Consensus 244 n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p 323 (625)
|.||.+.|+++| +|++|+++|||++|++|+.++|+.. +|++++|+||++|+|+|++++++++++ ++.+.+
T Consensus 139 t~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~~-----~D~~~~s~~K~lg~~~Gl~~~~~s~~~--~~~~~~ 208 (361)
T TIGR01366 139 TSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIAE-----TDVYYFAPQKNFASDGGLWLAIMSPAA--LERIEA 208 (361)
T ss_pred Cccceecccccc---cccCCCeEEEEcCccccCCCCCHHH-----CCEEEEEchhhcCCCCceEEEEECHHH--Hhhhhc
Confidence 999999999998 5889999999999999999999973 699999999999999888888999988 445555
Q ss_pred cccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 324 STCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYI-GYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~-g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
...++..+.+. .+...+.....+....+||++..+. .++++++ ... |.+.+.++++.+++++++.|.++++
T Consensus 209 ~~~~~~~~p~~----~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gg~e~~~~r~~~l~~~l~~~l~~~~~ 282 (361)
T TIGR01366 209 IAASGRWVPEF----LSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWM--NGNGGLDWAVARTADSSSRLYSWAQERPY 282 (361)
T ss_pred ccCCCCCCchh----hhHHHHHhccccCCCCCCchHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55554332110 0111111111112345667776553 5667776 445 6999999999999999999999877
Q ss_pred EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHH
Q 043646 401 IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 401 v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~ 480 (625)
++++......+.+.+....+++ +++..++.+.|.+ +||.+.+|. +. +
T Consensus 283 ~~~~~~~~~~~s~~v~~v~~~~--------------g~~~~~v~~~L~~-~gI~i~~~~------~~--l---------- 329 (361)
T TIGR01366 283 ATPFVTDPGKRSQVVGTIDFVD--------------DIDAATVAKILRA-NGIVDTEPY------RK--L---------- 329 (361)
T ss_pred cccCCCChhhcccceEEEECCC--------------ccCHHHHHHHHHH-CCCeeccCc------cc--c----------
Confidence 7776532222233322222222 2467789998954 699986432 11 1
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++|||++.|+|.+|+++++++|++++.+
T Consensus 330 -----------~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 330 -----------GRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred -----------CCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 2468999999999999999999999998754
No 46
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=7.6e-27 Score=256.08 Aligned_cols=362 Identities=17% Similarity=0.170 Sum_probs=240.9
Q ss_pred CCcchHHHHHHHHHhhCCCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 86 SGRSLRYIEDYIINNVLPFYGNTHTSDS-YVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 86 ~~~~p~~v~ea~~~~l~~~~~n~~~~~~-~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
....|+.+.+++.+.. .+.+-+.... ..+.+..+++.++++++++++|.+. ..++.++|+++.+..++.+...
T Consensus 79 ~~~~~p~i~~~~~~~~--~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~--~~l~~~~GA~a~~~~l~~~r~~-- 152 (481)
T PRK04366 79 TMKYNPKINEKVARLP--GFAELHPLQPEETVQGALELMYELQEWLKEITGMDA--VTLQPAAGAHGELTGLLMIRAY-- 152 (481)
T ss_pred CCCCCHHHHHHHHhCc--chhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCc--eEEEeCcHHHHHHHHHHHHHHH--
Confidence 3567778888887642 1223222111 2456678899999999999999973 3455557777765543321100
Q ss_pred cchhhhhhhhccCCCC--ceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecc
Q 043646 165 PSIMRDKLITSLRDEE--RWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSAC 242 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~ 242 (625)
.+++|| +..|+++...|+++...++..|++++.++++.++.+|+++|+++++ +++++|+++++
T Consensus 153 ----------~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-----~~t~~V~v~~P 217 (481)
T PRK04366 153 ----------HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-----EDTAALMLTNP 217 (481)
T ss_pred ----------hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-----cCCeEEEEeCC
Confidence 024443 2359999999999998888899999999998888999999999997 57999999987
Q ss_pred cCccccc-cCHHHHHHHHHHcCCEEEEeccCcCCCc-cccCCCCCCCCCcEEEEcCCCCCCCCCC-----ceEEEEeccc
Q 043646 243 SNVTGIY-SDTRSIARLLHQYGGFACFDFAASGPYV-KINLRSRNIDGYDAIFLATHKFLGGPGT-----PGILLISKAL 315 (625)
Q Consensus 243 ~n~TG~~-~~l~~I~~la~~~g~~vivD~A~~~g~~-~id~~~~~~~~~D~v~~S~hK~lggp~g-----~G~l~v~~~~ 315 (625)
+ +||.+ .|+++|+++||++|++++||+|++.+.. .++..++ |+|++++++|||||+|.| +|++++++++
T Consensus 218 n-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~ 293 (481)
T PRK04366 218 N-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL 293 (481)
T ss_pred C-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehhhh
Confidence 6 99988 5899999999999999999999986633 2344444 899999999999987743 5799999887
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFW-VKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~-~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
.+.+++...|...-.+... .......+|++.++.+.+.++.+ ..++ .....|++++.++...+++|+.++
T Consensus 294 --~~~lp~~~v~~~g~~~~l~------~~r~~~i~r~~a~t~~~l~~~~a-~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~ 364 (481)
T PRK04366 294 --APFLPVPVVEKDGDRYRLD------YDRPKSIGRVRAFYGNFGVLVRA-YAYIRSLGAEGLREVSEDAVLNANYLKAR 364 (481)
T ss_pred --HhhCCCCeeeccCCceeec------ccccccCCCcccccCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455444332110011110 00111124666666665444333 3333 223445667777888889999999
Q ss_pred hCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCCh
Q 043646 395 ILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474 (625)
Q Consensus 395 L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~ 474 (625)
|.++ +++..+. ..+..|.+.... ..-.+++..++.+.|.+ +||.++......
T Consensus 365 L~~~--~~~~~~~----~~~~~~~~~~~~---------~~~~g~~~~~v~~~L~~-~Gi~~~~~~~p~------------ 416 (481)
T PRK04366 365 LKDI--YDLPYDR----PCMHEFVLSGKK---------LKETGVRTLDIAKRLLD-YGFHPPTIYFPL------------ 416 (481)
T ss_pred hHhh--CcccCCC----CeeEEEEEECcc---------ccccCCCHHHHHHHHHH-CCccCCcccccc------------
Confidence 9886 3332221 111122221100 00112356789999965 799865211100
Q ss_pred hhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 475 ~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
...+.+|++++.++|++|||+++++|+++..+...
T Consensus 417 ----------------~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 417 ----------------IVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred ----------------ccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 01478999999999999999999999999877544
No 47
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=1.8e-26 Score=248.89 Aligned_cols=358 Identities=17% Similarity=0.101 Sum_probs=235.4
Q ss_pred ceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchh--hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 77 RLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYV--GQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 77 ~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~--~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
..+++..+..+..++.++++..... .. .+.++ .+.. ..+..++.+++++++++++|++.+ +++++.+|++++..
T Consensus 21 ~~~~l~~g~~~~~~p~~~~~~~~~~-~~-~~~~~-~~~~~~~~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~~~~ 96 (398)
T cd00613 21 SMSFLGSGTYKHNPPAVIKRNILEN-EF-YTAYT-PYQPEISQGRLQALFELQTMLCELTGMDVA-NASLQDEATAAAEA 96 (398)
T ss_pred CcccccccccCCcCcHHHHHHhccc-cC-cccCC-CCChhhhhhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHHHHH
Confidence 4567777777766666666544433 11 11111 1111 345678899999999999999765 57676566666544
Q ss_pred HHHHHhcccccchhhhhhhhccCC--CCceEEEEcCCCCchhHHHHHHcC----CeEEEEecCCCCCCCHHHHHHHHHHh
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRD--EERWVVFLGPYEHHSNLLSWRQSL----AEVVEIGLDDNGLLDIEALRSQLELY 228 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~--gd~~~Vlv~~~~h~s~~~~~~~~G----~~vv~v~~~~~~~ld~~~L~~~l~~~ 228 (625)
.+..++ +.+ ||+ |+++..+|+++...|...| ++++.++.+.++.+|+++|+++++
T Consensus 97 ~~~~~~---------------~~~~~gd~--Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-- 157 (398)
T cd00613 97 AGLAAI---------------RAYHKRNK--VLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-- 157 (398)
T ss_pred HHHHHH---------------hcccCCCE--EEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC--
Confidence 444433 234 664 9999999999998888777 999999987777899999999987
Q ss_pred hhCCCCeEEEEecccCccccccCH-HHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCC----
Q 043646 229 KAAKRPMLGSFSACSNVTGIYSDT-RSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGP---- 303 (625)
Q Consensus 229 ~~~~~~~lv~~~~~~n~TG~~~~l-~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp---- 303 (625)
+++++|++++++ +||.+.|+ ++|+++|++||+++|+|++|+.+....+...+ ++|++++|+|||+ +|
T Consensus 158 ---~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~---~~d~~~~s~~K~~-~p~g~G 229 (398)
T cd00613 158 ---EEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEY---GADIVVGNLQKTG-VPHGGG 229 (398)
T ss_pred ---CCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHc---CCCEEEeeccccC-CCCCCC
Confidence 579999999985 89999885 99999999999999999998876655555454 7899999999998 44
Q ss_pred -CCceEEEEeccccccCCCCCcccCCceEEe-eccccccccccccchhhhhcCCChhHH-----HHHHHHHHHHHHhhcC
Q 043646 304 -GTPGILLISKALYQLGSSPPSTCGGGTVNY-VNAFDEKDTLYLEDIEERENGGTPQIV-----QMIRAALAFWVKEYIG 376 (625)
Q Consensus 304 -~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~-~~~~~~~~~~~~~~~~~~~~~gt~~~~-----~~~~aal~~~~~~~~g 376 (625)
.+.|++++++++ .+.+.+...|+..... ...|..... ......+++.|++++. ....++..+......|
T Consensus 230 gp~~g~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g 305 (398)
T cd00613 230 GPGAGFFAVKKEL--VRFLPGRLVGVTKDAEGNRAFRLALQ--TREQHIRREKATSNICTGQALLALMAAMYIVYLGPEG 305 (398)
T ss_pred CCceeEEEEhhhh--HhhCCCCeeccccccCCCcceEEecc--cchhhcccccccccceecHHHHHHHHHHHHHHhCHHH
Confidence 346899998877 3444444433322100 000000000 0001223445554322 1112222222224457
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee
Q 043646 377 YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR 456 (625)
Q Consensus 377 ~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~ 456 (625)
.+++.++.++++++++++|.++++..... ..+.+++.|.+... .+.+..++++.|.+ .||.+.
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~---~~~~~~v~~~~~~~-------------~~~~~~~~~~~L~~-~gi~~~ 368 (398)
T cd00613 306 LKEIAERAHLNANYLAKRLKEVGGVLPFN---GPFFHEFVLRLPPL-------------YGIRAEDLAKALID-GGFHAP 368 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccCC---CCeeEEEEEEcCCc-------------chHHHHHHHHhhhh-cCcccc
Confidence 78889999999999999999886544211 12334455444210 01235678888865 688753
Q ss_pred cCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 043646 457 GGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516 (625)
Q Consensus 457 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL 516 (625)
... +. .++.+|+|+++++|++|+|+++++|
T Consensus 369 ~~~----------~~--------------------~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 369 TMY----------LP--------------------VDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccc----------cC--------------------CCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 210 00 2478999999999999999999874
No 48
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=4.5e-26 Score=242.43 Aligned_cols=344 Identities=15% Similarity=0.135 Sum_probs=234.4
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
++..+.+.+++.++. ..++|+....+..+........++++.+++++|. + +++++ +|++.++..++.++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~-~i~~~-~g~t~al~~~l~~~------ 79 (361)
T cd06452 11 GRLTPEARKALIEWG-DGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--D-EARVT-PGAREGKFAVMHSL------ 79 (361)
T ss_pred CCCCHHHHHHHHHHh-cccCCccccccccccccCchHHHHHHHHHHHcCC--c-eEEEe-CCHHHHHHHHHHHh------
Confidence 677788888887766 3346665422223333345688999999999998 3 68888 77888888887776
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCC--CCCHHHHHHHHHHhhh--CCCCeEEEEecc
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNG--LLDIEALRSQLELYKA--AKRPMLGSFSAC 242 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~--~ld~~~L~~~l~~~~~--~~~~~lv~~~~~ 242 (625)
+++||+ |+++...|++....++..|++++.++.+.++ .+|+++|++++++... .+++++|+++++
T Consensus 80 ---------~~~gd~--Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p 148 (361)
T cd06452 80 ---------CEKGDW--VVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHV 148 (361)
T ss_pred ---------cCCCCE--EEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECC
Confidence 578885 9999999999987888899999999998654 8999999999874211 136899999999
Q ss_pred cCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCC
Q 043646 243 SNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSP 322 (625)
Q Consensus 243 ~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~ 322 (625)
+|+||.+.|+++|+++|+++|+++++|+|++.|..+++...+ +.|+++.|+||++++|.++|++++++++. +.+.
T Consensus 149 ~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~l~~~~~~G~l~~~~~~~--~~l~ 223 (361)
T cd06452 149 DGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKEL---GADFIVGSGHKSMAASAPIGVLATTEEWA--DIVF 223 (361)
T ss_pred CCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHc---CCCEEEecCCccccCCCCeEEEEECHHHH--HHHh
Confidence 999999999999999999999999999999988877777665 78999999999998888899999998773 2221
Q ss_pred CcccCCceEEeeccccccccccccchhhhhcCCChhHHHH--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 323 PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM--IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
.....+. +.. .....+++..... +.+++..+. +. .+. ..+..+.++++++.|+++++
T Consensus 224 ~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~al~~~~-~~--~~~-~~~~~~~~~~l~~~L~~l~g 282 (361)
T cd06452 224 RTSQMFK-IKE----------------VELLGCTLRGAPLVTLMASFPHVK-ER--VKR-WDEEVEKARWFVAELEKIEG 282 (361)
T ss_pred ccccccc-cce----------------eeeeccccCchHHHHHHHHHHHHH-HH--HHH-HHHHHHHHHHHHHHHhcCCC
Confidence 1110000 000 0011233322111 223333331 11 222 23334456899999999999
Q ss_pred EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHH
Q 043646 401 IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 401 v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~ 480 (625)
++++++. ....+++.+... .... ........+.++.+.|.+ +||.+. +. +
T Consensus 283 ~~v~~~~-~~~~n~~~~~~~-~~~~------~~~~~~~~~~~~~~~L~~-~gI~~~----~~--------~--------- 332 (361)
T cd06452 283 IKQLGEK-PKNHDLMFFETP-SFDE------IAKKHKRRGYFLYSELKK-RGIHGI----KP--------G--------- 332 (361)
T ss_pred eEEECCC-CCCCceEEEEcC-Ccch------hhhhccccchhHHHHHHH-cCceEE----cC--------C---------
Confidence 9998542 123344444432 1000 000001123468888855 699842 10 0
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
..+++|++... .+++|++.++++|+++.
T Consensus 333 -----------~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 333 -----------LTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -----------CceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 13689999822 59999999999999764
No 49
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=3.4e-26 Score=250.29 Aligned_cols=322 Identities=19% Similarity=0.169 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH
Q 043646 117 QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196 (625)
Q Consensus 117 ~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (625)
....+...+.++++++++|++.+ ++++| +|+++++..++.++. +.++++ |+++..+|+++..
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~-~v~~~-~g~t~~~~~~~~a~~--------------~~~g~~--Vlv~~~~~~~~~~ 169 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVA-NASMY-DGATALAEAALMAVR--------------ITKRKK--VLVSGAVHPEYRE 169 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc-eEEec-CcHHHHHHHHHHHHH--------------hcCCCE--EEEeCccCHHHHH
Confidence 34666777888899999999877 78888 678888887776652 356775 9999999999988
Q ss_pred HHHH----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEE--ec
Q 043646 197 SWRQ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACF--DF 270 (625)
Q Consensus 197 ~~~~----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~viv--D~ 270 (625)
.++. .|++++.++++++ .+|+++|+++++ +++++|+++++ |+||.+.|+++|+++||++|+++++ |.
T Consensus 170 ~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-----~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~ 242 (447)
T PRK00451 170 VLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-----DDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDP 242 (447)
T ss_pred HHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-----CCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcCh
Confidence 8765 5899999999877 899999999997 57999999998 8999999999999999999999998 64
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCC-----CCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccc
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKF-----LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYL 345 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (625)
+ +.|.... ...+ ++|+++++.||| ++|| |+|++++++++ ++.+++...|+ +...............
T Consensus 243 ~-~~g~~~~-~~~~---~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~--~~~~~~~~~g~-~~~~~~~~~~~~~~~~ 313 (447)
T PRK00451 243 V-SLGLLKP-PGEY---GADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL--VRQMPGRLVGE-TVDADGKRGFVLTLQA 313 (447)
T ss_pred H-HhccCCC-cccC---CCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH--HhhCCCCEeee-ecccCCCeeeEeeccc
Confidence 4 3443322 2333 889999999997 6777 58999999988 44555555544 2111110000000001
Q ss_pred cchhhhhcCCChhHH-----HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEec
Q 043646 346 EDIEERENGGTPQIV-----QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420 (625)
Q Consensus 346 ~~~~~~~~~gt~~~~-----~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~ 420 (625)
.....+++.++.++. ..+.++..+......|.+.+.++...+++++.++|.++++++++.. +.+.+...
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~------~~~~~~~v 387 (447)
T PRK00451 314 REQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDG------PFFNEFVV 387 (447)
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCC------CeEEEEEE
Confidence 111223444454332 2122222211124567889999999999999999999989988622 22222211
Q ss_pred cCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee-cCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR-GGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~-~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
.- +.+..++++.|.+ +||.+. .+..+. . + .++++|+|
T Consensus 388 ~~--------------~~~~~~~~~~L~~-~gi~~~~~~~~~~----~---~--------------------~~~~~rvs 425 (447)
T PRK00451 388 RL--------------PKPAEEVNEALLE-KGILGGYDLGRYY----P---E--------------------LGNHLLVC 425 (447)
T ss_pred ec--------------CCCHHHHHHHHHh-cCCCCCccccccc----C---C--------------------cCCEEEEe
Confidence 10 0135688998865 577632 111110 0 1 13789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 043646 500 FPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~~ 520 (625)
+++++|++|+++++++|++++
T Consensus 426 ~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 426 VTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999998764
No 50
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=3e-25 Score=236.69 Aligned_cols=345 Identities=14% Similarity=0.154 Sum_probs=225.5
Q ss_pred CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccccc
Q 043646 86 SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVP 165 (625)
Q Consensus 86 ~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~ 165 (625)
+|..++.+.+++.++-... +..+.........+....+++++.+++++|.++ ++++ +|+++++..++.++
T Consensus 17 ~g~~~~~~~~a~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~---~~i~-~g~~~a~~~~~~~l----- 86 (370)
T TIGR02539 17 GGVLTEAARKALVEFGDGY-SVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE---ARVT-HGAREGKFAVMHAL----- 86 (370)
T ss_pred CCCCcHHHHHHHHHHhhcc-ccccccccccccccchHHHHHHHHHHHHhCCCc---eEEE-CChHHHHHHHHHHh-----
Confidence 5778888888887765321 111111111112234456778888999999963 4556 67788788888877
Q ss_pred chhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhh--CCCCeEEEEec
Q 043646 166 SIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKA--AKRPMLGSFSA 241 (625)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~--~~~~~lv~~~~ 241 (625)
+++||. |+++...|++....++..|++++.++.+. ++.+|+++|++++++... ..++++|++++
T Consensus 87 ----------~~~gd~--Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~ 154 (370)
T TIGR02539 87 ----------CKEGDW--VVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTH 154 (370)
T ss_pred ----------hCCCCE--EEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEEC
Confidence 467885 99999999999888888999999999863 478999999999974211 12688999999
Q ss_pred ccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCC
Q 043646 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSS 321 (625)
Q Consensus 242 ~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~ 321 (625)
++|+||.+.|+++|+++|+++|+++++|+||+.|..+++...+ ++|+++.|+||++++++++|++++++++ ++.+
T Consensus 155 p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~---~~di~v~s~sK~~~~~g~~G~l~~~~~~--i~~l 229 (370)
T TIGR02539 155 VDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEI---GADFIVGSGHKSMAASGPCGVLGMSEEW--EDIV 229 (370)
T ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHc---CCCEEEeeCcccccCCCCEEEEEECHHH--Hhhh
Confidence 9999999999999999999999999999999998766666554 6899999999999876778999999887 3333
Q ss_pred CCcccCCceEEeeccccccccccccchhhhhcCCChhHHHH--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC
Q 043646 322 PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM--IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ 399 (625)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 399 (625)
......+ .+. ... ...++...... ..+++... ....+... +....++++++.|.++
T Consensus 230 ~~~~~~~-~~~--------~~~--------~~~~~~~~~~~~~~~~al~~~---~~~l~~~~-~~~~~~~~l~~~L~~~- 287 (370)
T TIGR02539 230 LRKSRYS-PVK--------EVE--------LLGCTSRGAPIVTMMASFPHV---VERVKRWD-EEVKKTRWFVAELEDI- 287 (370)
T ss_pred cccccCC-ccc--------eee--------eecccccccHHHHHHHHHHHH---HHHHHHHH-HHHHHHHHHHHHHHhC-
Confidence 2221110 000 000 01122211111 11222221 11112222 2333467899999887
Q ss_pred cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCee-eecCCCCCchhhHhhhcCChhhHH
Q 043646 400 NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQ-ARGGCACAGPYGHTLLAFDQTRSL 478 (625)
Q Consensus 400 gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~-v~~G~~~~~~~~~~~l~~~~~~~~ 478 (625)
|+++++.. ....+++.+.+ +..... .-+..-....+.+.|.+ .||. ++.|
T Consensus 288 g~~~~~~~-~s~t~~v~~~~-~~~~~~------~~~~~~~~~~~~~~L~e-~GI~~ir~~-------------------- 338 (370)
T TIGR02539 288 GFIQLGQK-PKEHDLVKFET-PGFHEI------AQKHKRRGYFLYEELKK-RGIHGIRSG-------------------- 338 (370)
T ss_pred CcEEEccC-CCcCceEEEEC-CchhHH------hhhhccccHHHHHHHHh-CCCccccCC--------------------
Confidence 78876432 12344554433 211000 00000123468888865 6996 5421
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 479 EIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 479 ~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++||++. ..+++|+++++++|++++.+
T Consensus 339 -------------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 339 -------------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred -------------cceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 1368999983 46999999999999988654
No 51
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.95 E-value=2.1e-25 Score=237.93 Aligned_cols=330 Identities=16% Similarity=0.130 Sum_probs=221.5
Q ss_pred eccCCCCCcchHHHHHHHHHhhCCCCC-CCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 80 YADHTASGRSLRYIEDYIINNVLPFYG-NTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 80 Yld~~~~~~~p~~v~ea~~~~l~~~~~-n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
|||+++.++..+.+.+++.++....-. ..|...+....+..+.++++++.+++++|++ + .++|+ +|+++++. +..
T Consensus 14 YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~-~l~~~-sG~~a~~~-~~~ 89 (370)
T PRK05937 14 FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-E-AFIVP-SGYMANLG-LCA 89 (370)
T ss_pred ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-e-EEEEC-ChHHHHHH-HHH
Confidence 999999999888888888776543300 1222222222337789999999999999995 2 47776 78887654 333
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhC-CCCeEE
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAA-KRPMLG 237 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~-~~~~lv 237 (625)
.+ .++++ .|++...+|.++..+++......+.++ ..|+++|+++|+..... +.+.+|
T Consensus 90 ~~---------------~~~~d--~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v 147 (370)
T PRK05937 90 HL---------------SSVTD--YVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFI 147 (370)
T ss_pred Hh---------------CCCCC--EEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEE
Confidence 32 13455 588889999999999887644333343 46899999999742111 245688
Q ss_pred EEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCC----CCCCCCCcEEEEcCCCCCCCCCCceEEEEec
Q 043646 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLR----SRNIDGYDAIFLATHKFLGGPGTPGILLISK 313 (625)
Q Consensus 238 ~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~----~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~ 313 (625)
++++++|++|.+.|+++|+++|+++|+++++|+||+.|..+.+.. .+.....++++.|++|++| |.|.|+++.++
T Consensus 148 ~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g-~~G~~vl~~~~ 226 (370)
T PRK05937 148 FVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG-SMGAALLSSSE 226 (370)
T ss_pred EEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhh-cCceEEEcCHH
Confidence 899999999999999999999999999999999999998877763 2221233466788899987 66667665543
Q ss_pred cccccC-CCCCcccCCceEEeeccccccccccccchhhhhcCCChhH-HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 043646 314 ALYQLG-SSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI-VQMIRAALAFWVKEYIGYEVIKKQEDVYIESA 391 (625)
Q Consensus 314 ~~~~l~-~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l 391 (625)
....+. ...| .++..+.++. ...+.++++++ +..+ +.++++.+.+++++
T Consensus 227 ~~~~~~~~~~~--------------------------~~~s~~~~~~~~~a~~aal~~l--~~~~-~~~~~~l~~l~~~l 277 (370)
T PRK05937 227 VKQDLMLNSPP--------------------------LRYSTGLPPHLLISIQVAYDFL--SQEG-ELARKQLFRLKEYF 277 (370)
T ss_pred HHHHHHHhCCC--------------------------CeecCCCCHHHHHHHHHHHHHH--HhCc-HHHHHHHHHHHHHH
Confidence 221110 0111 1122333322 22234566665 3345 45678888899999
Q ss_pred HHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhc
Q 043646 392 LGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLA 471 (625)
Q Consensus 392 ~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~ 471 (625)
.+.|.... + ..+..+.+ +. .....+.+.|. ++||.++..|..
T Consensus 278 ~~~l~~~~------~-----~~~~~i~~-~~---------------~~~~~~~~~L~-~~gi~v~~~~~~---------- 319 (370)
T PRK05937 278 AQKFSSAA------P-----GCVQPIFL-PG---------------ISEQELYSKLV-ETGIRVGVVCFP---------- 319 (370)
T ss_pred HHhcCCCC------C-----CCEEEEEe-CC---------------hhHHHHHHHHH-HCCeeEEeeCCC----------
Confidence 88875421 1 11222333 21 12457777774 479988743321
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
..+++|||+++++|++|+++++++|++++.+.
T Consensus 320 --------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 320 --------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred --------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 13689999999999999999999999987654
No 52
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.95 E-value=9.9e-26 Score=238.60 Aligned_cols=357 Identities=20% Similarity=0.209 Sum_probs=231.1
Q ss_pred cccccccCCCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcc
Q 043646 35 TCSEFKNDHHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDS 113 (625)
Q Consensus 35 ~~~~~~~~~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~ 113 (625)
.++.+.++..+|+. .+.++.++++++.+......+.+| + |+.+-.+++.+..++..+..... |+....+
T Consensus 2 ~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P---~---~~~~~~~~~~~~~i~~~~l~~~~----n~n~~~~ 71 (373)
T PF00282_consen 2 GELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHP---R---FFGFVPGGPSPASILADLLASAL----NQNGFTW 71 (373)
T ss_dssp TSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTST---T---BESSSHT--CHHHHHHHHHHHHH----T-BTTST
T ss_pred hhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCCh---h---HhhhccCCccHHHHHHHHHHhhh----ccccccc
Confidence 34566777787777 778999999998876554445544 3 34444445555555554444332 3333345
Q ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCC------CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc
Q 043646 114 YVGQRMTKMVHEASNYIKRCLGGGQA------DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG 187 (625)
Q Consensus 114 ~~~~~~~~~~~~~~~~ia~~~g~~~~------~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~ 187 (625)
..++..++++.++.+++++++|.+.+ ...+||++||.+++..+..+.....+.... .+....++++|+++
T Consensus 72 ~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~----~~~~~~~~~~i~~s 147 (373)
T PF00282_consen 72 EASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKA----KGVEEIPKPVIYVS 147 (373)
T ss_dssp TTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHH----HTTTHCSSEEEEEE
T ss_pred ccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhh----cccccccccccccc
Confidence 56788899999999999999999821 246888788888888887765322111000 11111355789999
Q ss_pred CCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCC-CeEEEEecccCccccccCHHHHHHHHHHcCCEE
Q 043646 188 PYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKR-PMLGSFSACSNVTGIYSDTRSIARLLHQYGGFA 266 (625)
Q Consensus 188 ~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~-~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~v 266 (625)
...|+|+.++++..|..++.||+++++.+|+++|+++|.+....+. |.+|+.+.+++.||.++|+++|+++|+++++|+
T Consensus 148 ~~aH~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 148 EQAHYSIEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWL 227 (373)
T ss_dssp TTS-THHHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EE
T ss_pred cccccHHHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceee
Confidence 9999999999999999999999999999999999999986544443 558999999999999999999999999999999
Q ss_pred EEeccCcCCCcc-ccCCCC--CCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCC--CCcccCCceEEeeccccccc
Q 043646 267 CFDFAASGPYVK-INLRSR--NIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSS--PPSTCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 267 ivD~A~~~g~~~-id~~~~--~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~ 341 (625)
|||+|.+....- ...+.+ +.+.+|++++++|||++.|.++|+++++++....... .+.+.+... ...+
T Consensus 228 HVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~-------~~~~ 300 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDD-------RESD 300 (373)
T ss_dssp EEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S--------SSS-
T ss_pred eecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccc-------cccc
Confidence 999998763321 112221 3457899999999999999999999999865211111 111111000 0000
Q ss_pred cccccchhhhhcCCChhHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEe
Q 043646 342 TLYLEDIEERENGGTPQIVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~ 419 (625)
.. .+. ...--.++-...++ +-..+.. ....|+.++.++..++++++.++|++.++++++.+. ..++++|..
T Consensus 301 ~~-~~~-~~~tl~~SR~~~alk~w~~l~~--~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~---~~~~vcFr~ 372 (373)
T PF00282_consen 301 ES-YDY-GDYTLQGSRRFRALKLWATLKS--LGREGYRERIRRCIELARYLADRLRKDPRFELVNEP---DLNIVCFRY 372 (373)
T ss_dssp GG-GCE-EEGSSSSSGHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT---SSSEEEEEE
T ss_pred cc-ccc-ccccccccccchHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC---CceEEEEEe
Confidence 00 000 00000112111111 1111222 245667788888889999999999999999998854 789999975
No 53
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=4.8e-25 Score=234.99 Aligned_cols=345 Identities=15% Similarity=0.080 Sum_probs=243.1
Q ss_pred ceEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal 153 (625)
.++.|..+.. .+.|+.+.+++.+.+..- +. .|....+..++.+.+.+++.+.+|.+ ++++|++| +|++++|
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~----~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt-~Ga~~al 102 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEG----GT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVT-AGAKEAL 102 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcc----cC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEe-CCHHHHH
Confidence 3555555444 467888999998877531 11 12234456788888888888888743 44359998 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecC---CCCCCCHHHHHHHHHHhhh
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLD---DNGLLDIEALRSQLELYKA 230 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~---~~~~ld~~~L~~~l~~~~~ 230 (625)
..++.++ ++|||+ |+++.+.|+++....+..|++++.++++ .++.+|+++|+++++
T Consensus 103 ~~~~~a~---------------~~pGDe--Vlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---- 161 (393)
T COG0436 103 FLAFLAL---------------LNPGDE--VLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---- 161 (393)
T ss_pred HHHHHHh---------------cCCCCE--EEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC----
Confidence 9998888 689997 9999999999998999999999999975 267999999999999
Q ss_pred CCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCC-Cc---cccCCCCCCC-CCcEEEEcCCCCCCC
Q 043646 231 AKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YV---KINLRSRNID-GYDAIFLATHKFLGG 302 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g-~~---~id~~~~~~~-~~D~v~~S~hK~lgg 302 (625)
++||++++++|+||||.+.+ +++|+++|++||++++.|+++.-- +. +..+-..... ..-+.+.|++|.++.
T Consensus 162 -~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 162 -PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGM 240 (393)
T ss_pred -ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccc
Confidence 68999999999999999977 678999999999999999995421 11 1111111100 123555689999984
Q ss_pred CC-CceEEEEe-ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh--cCHH
Q 043646 303 PG-TPGILLIS-KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY--IGYE 378 (625)
Q Consensus 303 p~-g~G~l~v~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~--~g~~ 378 (625)
++ .+|+++++ +.+.+ .+. .+......+.+.+.+.+ +...+.... ...+
T Consensus 241 tGwRvG~~v~~~~~l~~--~~~------------------------~~~~~~~~~~~~~~Q~a--a~~aL~~~~~~~~~~ 292 (393)
T COG0436 241 TGWRIGWVVGPPEELIA--ALR------------------------KLKSYLTSCAPTPAQYA--AIAALNGPQSDEVVE 292 (393)
T ss_pred cccceeEeecChHHHHH--HHH------------------------HHHHhcccCCCHHHHHH--HHHHhcCccchHHHH
Confidence 43 39999998 55521 110 00122233445555532 222221111 2344
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecC
Q 043646 379 VIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGG 458 (625)
Q Consensus 379 ~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G 458 (625)
..++..+..++.+.+.|.+++|+.+..+. .++.+.|.-.+. ..+..+++..|+++.||.+.+|
T Consensus 293 ~~~~~~~~rrd~l~~~l~~~~g~~~~~~p---~Ga~Y~~~~i~~--------------~~d~~~f~~~Ll~~~gV~v~PG 355 (393)
T COG0436 293 EMREEYRERRDLLVEALNEIGGLSVVKPP---EGAFYLFPKIPE--------------LLDSEEFAKKLLEEAGVAVVPG 355 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeccCC---CeeEEEEeecCC--------------CCCHHHHHHHHHHhCCEEEecc
Confidence 55566777899999999999889988732 234444443332 1457789999999999999999
Q ss_pred CCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 459 CACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..|+.+. ..+++|||+.. +.++++..++.|++.+..
T Consensus 356 ~~Fg~~~--------------------------g~~~vRis~~~--~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 356 SGFGEPP--------------------------GEGYVRLSLAT--SEETLEEALRRLARFLAE 391 (393)
T ss_pred cccCCCC--------------------------CCCeEEEEEec--CHHHHHHHHHHHHHHHHh
Confidence 9887321 24899999973 558888888888877654
No 54
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.95 E-value=8.4e-26 Score=225.24 Aligned_cols=377 Identities=13% Similarity=0.097 Sum_probs=269.2
Q ss_pred eEeccCCCCCc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCC--hHHHHHH
Q 043646 78 LTYADHTASGR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGA--GTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~s--Gttaal~ 154 (625)
.+|+.+-..+- ..+.|.+++.+.+..+.+..+......| ......++++.+|++++-+.. ++|++. ...+.|.
T Consensus 174 tVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG--~s~~hv~LE~eLA~LHqK~aA--LlFsSCfVANDstLf 249 (570)
T KOG1360|consen 174 TVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISG--HSKHHVRLEAELADLHQKEAA--LLFSSCFVANDSTLF 249 (570)
T ss_pred EEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCC--CCchhhhHHHHHHHHhcCcce--eeeeeeeeccchHHH
Confidence 35554433332 2458999999988776544443222222 345566788999999997654 788631 2334677
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.+...+ ||.+ |+....+|.|++.++|..+++-.....+ |+++|+++|++ .....|
T Consensus 250 tLak~l-----------------pgce--i~SD~gNHASMI~GIrns~v~K~IFrHN-----D~~hL~~lL~~-~~~svP 304 (570)
T KOG1360|consen 250 TLAKKL-----------------PGCE--IFSDEGNHASMIQGIRNSRVPKHIFRHN-----DLDHLEQLLQS-SPKSVP 304 (570)
T ss_pred HHHHHC-----------------CCcE--EeccccchHHHHHHhhhcCCcceeeccC-----CHHHHHHHHHh-CCCCCC
Confidence 776654 6663 8888999999999999999876666654 89999999985 223468
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc-----ccCCCCCCCCCcEEEEcCCCCCCCCCCceEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK-----INLRSRNIDGYDAIFLATHKFLGGPGTPGIL 309 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~-----id~~~~~~~~~D~v~~S~hK~lggp~g~G~l 309 (625)
|+|.|..+++++|.++|+++|++++|+||++.++|++|++|... +.-+++.++.+|+++.+..|.||+-+ |++
T Consensus 305 KivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG--GYI 382 (570)
T KOG1360|consen 305 KIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG--GYI 382 (570)
T ss_pred ceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc--cee
Confidence 99999999999999999999999999999999999999987653 23334445678999999999999766 788
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCC--hhH-HHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT--PQI-VQMIRAALAFWVKEYIGYEVIKKQEDV 386 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt--~~~-~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (625)
.....+++ .++.+ ..+|...| |+. +.-+..++.++ +..+|... +...+.
T Consensus 383 Aat~~LvD--miRSy------------------------AaGFIFTTSLPP~vl~GAleaVr~l-k~~eg~~l-R~~hqr 434 (570)
T KOG1360|consen 383 AATRKLVD--MIRSY------------------------AAGFIFTTSLPPMVLAGALEAVRIL-KSEEGRVL-RRQHQR 434 (570)
T ss_pred hhhhhHHH--HHHHh------------------------cCceEEecCCChHHHHhHHHHHHHH-hhhhhHHH-HHHHHH
Confidence 77777743 22111 12222222 333 33233444443 34455543 444555
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG 466 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~ 466 (625)
...|+++.|.++ |+-|+..+ ..|+-..+-+.. -...+++.|..+|||+|..-.+++.+.|
T Consensus 435 nv~~~kq~l~~~-GiPVi~~p----SHIiPv~vgda~---------------l~~~~sd~Li~~h~iYvQaINyPTV~rG 494 (570)
T KOG1360|consen 435 NVKYVKQLLMEL-GIPVIPNP----SHIIPVRVGDAA---------------LAKQASDILISKHNIYVQAINYPTVARG 494 (570)
T ss_pred HHHHHHHHHHHc-CCcccCCC----cceeeeeccCHH---------------HHHHHHHHHHHhcCeEEEeccCCccccc
Confidence 688999999886 77666543 245555553321 1457888899999999998777665543
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcccCcc-cccccccccccccc
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLYH-FNVKAGNWCSSQKA 545 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~~~~~y~-~~~~~~~w~~~~~~ 545 (625)
...+||.+.+.+|++.++.|+++|..+..+ +.|.. -+|.+..+.||...
T Consensus 495 --------------------------~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~----v~l~~~~~~s~~~c~fc~~~ 544 (570)
T KOG1360|consen 495 --------------------------TERLRIAPTPHHTPQMMNILVNALLDVWNE----VGLPRVRDWSSAGCNFCVGE 544 (570)
T ss_pred --------------------------ceeeecCCCCCCCHHHHHHHHHHHHHHHHH----cCCcccCCccccccccccCc
Confidence 367999999999999999999999976555 55555 68999999999988
Q ss_pred -hhhhhhhhcccccCCcch
Q 043646 546 -IKDLIDKETNNNINNPLA 563 (625)
Q Consensus 546 -~~~~~~~~~~~~~~~~~~ 563 (625)
.++++|++|.++|+++-+
T Consensus 545 ~~hf~~ls~~e~~~~~~~~ 563 (570)
T KOG1360|consen 545 LWHFEVLSETEDSYFPNVR 563 (570)
T ss_pred ccccccccccccccCCCcc
Confidence 899999999998888744
No 55
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.94 E-value=2.5e-24 Score=249.02 Aligned_cols=391 Identities=17% Similarity=0.134 Sum_probs=250.4
Q ss_pred eEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH-HH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDS-YVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI-KR 155 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~-~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal-~~ 155 (625)
.+.|.. .+....+.+...+... +.+.+-|...- ..+.+..+++.++.+++++++|.+ .+.+..+|++.+- ..
T Consensus 501 ~i~lGs-ct~~~~p~~~~~~~~~--~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d---~~sl~~~~ga~ge~ag 574 (954)
T PRK05367 501 MIPLGS-CTMKLNAAAEMIPITW--PEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD---AVSLQPNAGAQGEYAG 574 (954)
T ss_pred eeeCCc-CCCcCCHHHHHHHHhC--ccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC---CEEECccHHHHHHHHH
Confidence 455555 4455555555555432 22222222111 245567899999999999999986 3455544444332 33
Q ss_pred HHHHhcccccchhhhhhhhccCCCC--ceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEE--RWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~ 233 (625)
++.+... ..++|+ +.+|+++...|+++..++...|++++.++++.+|.+|+++|+++++.+ ..+
T Consensus 575 L~a~r~~------------~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~--~~~ 640 (954)
T PRK05367 575 LLAIRAY------------HESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEH--ADN 640 (954)
T ss_pred HHHHHHH------------hhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhcc--CCC
Confidence 3222210 023443 457999999999999999999999999999988999999999999731 135
Q ss_pred CeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccC-CCCCCCCCcEEEEcCCCCCCCCCC-----ce
Q 043646 234 PMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINL-RSRNIDGYDAIFLATHKFLGGPGT-----PG 307 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~-~~~~~~~~D~v~~S~hK~lggp~g-----~G 307 (625)
+.+|+++++++..+...|+++|+++||++|+++++|+|+..+...+.- ..+ |+|++++++||||+.|.| +|
T Consensus 641 la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~---GADi~~~s~HK~f~~P~G~GGPg~G 717 (954)
T PRK05367 641 LAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDI---GADVSHLNLHKTFCIPHGGGGPGVG 717 (954)
T ss_pred eEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhc---CCCEEEecCcccCCCCcCCCCCceE
Confidence 788889988877444589999999999999999999999866555432 233 899999999999976654 66
Q ss_pred EEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHH---HHH
Q 043646 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIK---KQE 384 (625)
Q Consensus 308 ~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~---~~~ 384 (625)
++++++.+ .|...|+.... .. +. . ..... .+.++.+...+...+......|.+.++ ++.
T Consensus 718 ~l~vr~~l------~p~lpg~~v~~--~~----~~----~-~~g~v-~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~ 779 (954)
T PRK05367 718 PIGVKAHL------APFLPGHPVQI--AG----GE----T-GIGAV-SAAPFGSASILPISWMYIRMMGAEGLRQATEVA 779 (954)
T ss_pred EEeecccc------cccCCCCccCc--CC----CC----C-CcCcc-hhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 99998655 23444432100 00 00 0 00000 122222222221122222456666554 445
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCC-CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 385 DVYIESALGRILPNQNIQVLGNTS-VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~-~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
..+++|+.++|.+...+...++.. -.+-.++.+...+ ...++...++++.|.+ +||....-.+.
T Consensus 780 ~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~------------~~~g~~~~di~krL~d-~G~~~~t~~~p-- 844 (954)
T PRK05367 780 ILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLK------------ESTGITVDDIAKRLID-YGFHAPTMSFP-- 844 (954)
T ss_pred HHHHHHHHHHHHhhcCccccCCCCCcccceEEEeeccc------------ccCCCCHHHHHHHHHH-CCCeEeecCCc--
Confidence 589999999997753333333211 0112233332111 1123456789999955 89998652211
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccc
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHRFLPLYHFNVKAGNWCSSQ 543 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~~~~~y~~~~~~~~w~~~~ 543 (625)
.++.+||++..+++++|+|+|+++|+.+..+..+ +.+|+|...+
T Consensus 845 ----------------------------v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~--------~~~~~~~~~~ 888 (954)
T PRK05367 845 ----------------------------VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE--------VEAGEWPAED 888 (954)
T ss_pred ----------------------------cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH--------hhcCCCCCCc
Confidence 1488999999999999999999999999988655 8899999998
Q ss_pred cchh------hhhhh-hcccccCC
Q 043646 544 KAIK------DLIDK-ETNNNINN 560 (625)
Q Consensus 544 ~~~~------~~~~~-~~~~~~~~ 560 (625)
+.+| .+++. ||-..|+.
T Consensus 889 ~~~~~ap~~~~~~~~~~w~~~y~r 912 (954)
T PRK05367 889 NPLKNAPHTAADLVADEWDHPYSR 912 (954)
T ss_pred chhhhCCCCHHHhccCCCCCCCCH
Confidence 8888 33443 67544443
No 56
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.3e-24 Score=234.52 Aligned_cols=345 Identities=15% Similarity=0.072 Sum_probs=232.4
Q ss_pred CceEeccCCCCC--cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHH
Q 043646 76 RRLTYADHTASG--RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTA 151 (625)
Q Consensus 76 ~~~~Yld~~~~~--~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGtta 151 (625)
.+.++|+++... ++|+.+.+++.+.+... +...|....+..++.+.+.+++++.+|.+ ++++|++| +|+++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it-~Ga~~ 113 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERG----GVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIIT-PGTQG 113 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcC----CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEe-CCcHH
Confidence 456788876654 35567888887766321 11112222234667788888888888863 31479998 89999
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-----CCCCCHHHHHHHHH
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-----NGLLDIEALRSQLE 226 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-----~~~ld~~~L~~~l~ 226 (625)
++..++.++ +++||+ |++..+.|+.+...++..|++++.++++. +..+|+++|+++++
T Consensus 114 al~~~~~~l---------------~~~Gd~--Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~ 176 (405)
T PRK06207 114 ALFLAVAAT---------------VARGDK--VAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK 176 (405)
T ss_pred HHHHHHHHh---------------cCCCCE--EEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh
Confidence 999998887 578986 89999999998888888999999999862 46799999999987
Q ss_pred HhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCC-CCCcEEEEcCCC
Q 043646 227 LYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNI-DGYDAIFLATHK 298 (625)
Q Consensus 227 ~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~-~~~D~v~~S~hK 298 (625)
+++++|++++|+||||.+.+ +++|+++|++||+++++|++++.-. ....+..+.. ..--+++.|++|
T Consensus 177 -----~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 251 (405)
T PRK06207 177 -----AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSK 251 (405)
T ss_pred -----hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchh
Confidence 47899999999999999987 6778889999999999999966321 1112221110 011267789999
Q ss_pred CCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcC-
Q 043646 299 FLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIG- 376 (625)
Q Consensus 299 ~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g- 376 (625)
.|+.|+ .+|+++.++++. +.+... ......+.+.+.+ .++..++.+..+
T Consensus 252 ~~~lpGlRiG~ii~~~~l~--~~~~~~------------------------~~~~~~~~~~~~q---~a~~~~l~~~~~~ 302 (405)
T PRK06207 252 TESLSGYRLGVAFGSPAII--DRMEKL------------------------QAIVSLRAAGYSQ---AVLRTWFSEPDGW 302 (405)
T ss_pred hccCcccceEEEEcCHHHH--HHHHHH------------------------HhHhccCCCHHHH---HHHHHHHhCcHHH
Confidence 998554 389999887762 221100 0001112222222 222222222111
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee
Q 043646 377 YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR 456 (625)
Q Consensus 377 ~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~ 456 (625)
.+...++.+..++.+.+.|.+++++++..+ .++.+.|...+.. .++..++++.|.+++||.++
T Consensus 303 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~gg~fl~~~l~~~-------------~~~~~~~~~~l~~~~gV~v~ 365 (405)
T PRK06207 303 MKDRIARHQAIRDDLLRVLRGVEGVFVRAP----QAGSYLFPRLPRL-------------AVSLHDFVKILRLQAGVIVT 365 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceecCC----CeeEEEEEeCccc-------------CCCHHHHHHHHHHhcCEEEe
Confidence 344445556667888888888777776654 3456666555421 13456788888766899999
Q ss_pred cCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 457 GGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 457 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+|..|... .++++||+++. +.++++..++.|.+++++
T Consensus 366 pG~~F~~~---------------------------~~~~~Ris~~~--~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 366 PGTEFSPH---------------------------TADSIRLNFSQ--DHAAAVAAAERIAQLIER 402 (405)
T ss_pred CchHhCCC---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 98766411 24899999984 678899988888887654
No 57
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.94 E-value=6.7e-25 Score=213.03 Aligned_cols=350 Identities=16% Similarity=0.132 Sum_probs=260.5
Q ss_pred cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 88 RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
-.+..|.+++.. |..+ +.++....+++++++-++..|.+..+...++.|+|+.+ +...+..+
T Consensus 27 nl~~~V~~A~~~--------~~lg--h~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g-~E~al~N~------- 88 (385)
T KOG2862|consen 27 NLSGRVQEAMSR--------PSLG--HMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSG-WEAALVNL------- 88 (385)
T ss_pred CCCHHHHHhhcC--------Cccc--cCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcch-HHHHHHhh-------
Confidence 356677777643 2221 25677889999999999999999877667787776665 44443333
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchh--HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSN--LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~--~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~ 245 (625)
+.|||+ |++....-.+- ....+..|++|..|+.+..+.+.++.+++++.+ .++++|+++|..+.
T Consensus 89 --------lePgd~--vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsq----h~p~~vfv~hgdsS 154 (385)
T KOG2862|consen 89 --------LEPGDN--VLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQ----HKPKAVFVTHGDSS 154 (385)
T ss_pred --------cCCCCe--EEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHh----cCCceEEEEecCcc
Confidence 689997 44433222222 245677899999999988889999999999996 58999999999999
Q ss_pred cccccC-HHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCc
Q 043646 246 TGIYSD-TRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPS 324 (625)
Q Consensus 246 TG~~~~-l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~ 324 (625)
||+..| ++.+.++||+|+++++||.+++.|..++.|++| ++|+.....+|.+++|.|++.+..++.. +..++..
T Consensus 155 TgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew---gVDvaytgSQKaL~aP~GLsiisfS~ka--~~~~~~r 229 (385)
T KOG2862|consen 155 TGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW---GVDVAYTGSQKALGAPAGLSIISFSDKA--LEAIRDR 229 (385)
T ss_pred ccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh---cccEEEecchhhcCCCCCcceeecCHHH--HHHHhhc
Confidence 999999 677899999999999999999999999999999 9999999999999999999998888776 2222111
Q ss_pred ccCCceEEeeccccccccccccchhhhhcCCChhHHHH--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE
Q 043646 325 TCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM--IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ 402 (625)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~ 402 (625)
..+-- ..|.+ +..-...+..+.+.+....|+++..+ +++|++.+. ..|.+++.++.++++++++..|.++ |++
T Consensus 230 K~~~~-~~yFd-~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~--eeGL~~~~~rH~e~s~~l~~~l~~~-GLq 304 (385)
T KOG2862|consen 230 KTKPV-SFYFD-ILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIA--EEGLENSWRRHREMSKWLKLSLEAL-GLQ 304 (385)
T ss_pred cCCce-EEEEe-HHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHh-Ccc
Confidence 11000 01110 00000111122234556678877665 478888874 5699999999999999999999987 888
Q ss_pred EeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHH
Q 043646 403 VLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRS 482 (625)
Q Consensus 403 v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~ 482 (625)
........+++.++-...+. +++..+++.++.+.+++.+.+|....
T Consensus 305 ~fv~~e~~rlptvttv~vp~--------------gvDw~dVv~~~~~~~~vei~gglg~~-------------------- 350 (385)
T KOG2862|consen 305 LFVVDEELRLPTVTTVKVPY--------------GVDWKDVVAYAMSHYVVEIGGGLGPT-------------------- 350 (385)
T ss_pred ceecChhhccCcceeeecCC--------------CCCHHHHHHHHHHhcCEEeccccCCC--------------------
Confidence 77665567888777766553 46788999999998899987665432
Q ss_pred HHHhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHh
Q 043646 483 AIQKGYLGVKPGWTRITF-PYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 483 ~~~~g~~g~~~g~iRis~-~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+..+||.+ +...+.+-|+..++.|+..+++
T Consensus 351 ---------~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 351 ---------VGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ---------cccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 247899997 6667889999999999887765
No 58
>PLN02263 serine decarboxylase
Probab=99.94 E-value=5.5e-24 Score=226.93 Aligned_cols=356 Identities=13% Similarity=0.092 Sum_probs=238.4
Q ss_pred hHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcc-hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHH
Q 043646 51 SEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRS-LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNY 129 (625)
Q Consensus 51 ~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~-p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 129 (625)
+++.++.+++.+.... ..+|.+..+.-. +..+.+ +......-.+.|... +.++..+.++..++.+|
T Consensus 75 ~~~~l~~~~~~~~~~~-----------~~~~gYp~n~~~d~s~l~~-~l~~~~nN~Gdp~~~-s~~~~~s~~~E~~Vi~w 141 (470)
T PLN02263 75 MASVLARYRKTLVERT-----------KHHLGYPYNLDFDYGALGQ-LQHFSINNLGDPFIE-SNYGVHSRQFEVGVLDW 141 (470)
T ss_pred HHHHHHHHHHHHHhcc-----------cceeCCCCcccCChhhHHH-HHHhhccCCCCcccc-CCcchhHHHHHHHHHHH
Confidence 4777888888775431 113333222222 223333 333333333555442 22233678999999999
Q ss_pred HHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEE
Q 043646 130 IKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEI 208 (625)
Q Consensus 130 ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v 208 (625)
+++++|.++++ ..++|++||.++|..+..++.. .+. .+++++...|+|+.++.+..|.+++.|
T Consensus 142 la~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~--------------~~~--~vvy~S~~aH~Sv~KAa~llgi~~~~V 205 (470)
T PLN02263 142 FARLWEIEKNEYWGYITNCGTEGNLHGILVGREV--------------FPD--GILYASRESHYSVFKAARMYRMECVKV 205 (470)
T ss_pred HHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhh--------------cCC--cEEEEcCCccHHHHHHHHhcCCcceEe
Confidence 99999997642 4678878888899988777631 122 269999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCC-----EEEEeccCcCCCcccc--C
Q 043646 209 GLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGG-----FACFDFAASGPYVKIN--L 281 (625)
Q Consensus 209 ~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~-----~vivD~A~~~g~~~id--~ 281 (625)
|+++++.+|+++|+++|.++ ..+|.+|+.+.+++++|.++|+++|+++|+++|+ |+|||+|.++...++- .
T Consensus 206 p~d~~g~mD~~aL~~aI~~d--~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 206 DTLVSGEIDCADFKAKLLAN--KDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred ccCCCCcCcHHHHHHHHHhC--CCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence 99999999999999999853 1358899999999999999999999999999997 9999999876555321 1
Q ss_pred CCC-CCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 282 RSR-NIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 282 ~~~-~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
..+ ....+|++++++|||++.|.++|++++++... ..+.. ...|+..... -..|+-+..
T Consensus 284 ~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~--~~~~~-----------------~~~Yl~~~d~-ti~gSR~g~ 343 (470)
T PLN02263 284 PKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI--NVLSS-----------------NVEYLASRDA-TIMGSRNGH 343 (470)
T ss_pred cccCCCcCccEEEECCccccCCCcCEEEEEEehhhH--hhhcc-----------------ChHhhCCCCC-CcCCCCCcH
Confidence 111 11259999999999999999999999997652 11100 0011110000 012232221
Q ss_pred HH--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 361 QM--IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 361 ~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
.. +-+.+... ...|+..+.++..++++++.++|+++ ++.++.++ ...++.|....+
T Consensus 344 ~al~lW~~L~~~--G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p---~s~~V~f~~p~~---------------- 401 (470)
T PLN02263 344 APIFLWYTLNRK--GYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNE---LSSTVVFERPKD---------------- 401 (470)
T ss_pred HHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCC---CceEEEEecCch----------------
Confidence 11 11222221 44567777888888999999999988 66655432 356666653211
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
+. . . .|-++.. .++.++|.+.+..+.+.+|.|++.|++
T Consensus 402 ---~~---~-~-~gW~L~~----------------------------------~~~~~Hivvmphv~~~~id~fi~DL~~ 439 (470)
T PLN02263 402 ---EE---F-V-RRWQLAC----------------------------------QGNIAHVVVMPSVTIEKLDYFLKELVE 439 (470)
T ss_pred ---HH---h-h-cceEEcc----------------------------------CCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 11 1 1 2444431 135699999888899999999999988
Q ss_pred HHH
Q 043646 519 IAA 521 (625)
Q Consensus 519 ~~~ 521 (625)
...
T Consensus 440 ~~~ 442 (470)
T PLN02263 440 KRS 442 (470)
T ss_pred HHh
Confidence 755
No 59
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=9.4e-25 Score=231.69 Aligned_cols=316 Identities=16% Similarity=0.135 Sum_probs=217.8
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
++.|+.|.+++.+....+ + ...++.+++++++++++|++ ++++| +|+|++++.++.++
T Consensus 23 s~~~~~v~~a~~~~~~~~----~--------~~~~~~~~~~~~~a~~~g~~---~~~~~-~g~t~al~~al~al------ 80 (363)
T TIGR01437 23 STVSDEVADAQKRGAQNY----F--------EIKELVNKTGEYIANLLGVE---DAVIV-SSASAGIAQSVAAV------ 80 (363)
T ss_pred CCCCHHHHHHHHHHHhcC----C--------CHHHHHHHHHHHHHHhhCCC---eEEEE-cCHHHHHHHHHHHH------
Confidence 457889999998876322 0 14577899999999999975 56888 67888888887776
Q ss_pred hhhhhhhhccCCCCc-------------eEEEEcCCCCchh----HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhh
Q 043646 167 IMRDKLITSLRDEER-------------WVVFLGPYEHHSN----LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYK 229 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~-------------~~Vlv~~~~h~s~----~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~ 229 (625)
+++||+ ..|+++.+.+..+ ....+..|+++++++.+ +.+|+++++++|+
T Consensus 81 ---------~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~--- 146 (363)
T TIGR01437 81 ---------ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAIT--- 146 (363)
T ss_pred ---------hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcC---
Confidence 344540 1377765333322 23456689999999864 5699999999998
Q ss_pred hCCCCeEEE-EecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceE
Q 043646 230 AAKRPMLGS-FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGI 308 (625)
Q Consensus 230 ~~~~~~lv~-~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (625)
++|++++ +++++|++|.+.|+++|+++||+||+++++|+||+.... ....+ ++|++++|+||+++||. .|+
T Consensus 147 --~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~---g~D~~~~S~~K~l~gp~-~G~ 218 (363)
T TIGR01437 147 --EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRL---GADLVIYSGAKAIEGPT-SGL 218 (363)
T ss_pred --hhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHc---CCCEEEEeCCcccCCCc-eEE
Confidence 5788655 567789999999999999999999999999999873210 01122 68999999999999998 699
Q ss_pred EEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 309 LLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 309 l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
++.+++.. ..+.+...+. ...++.|+.++.++ .++++++. ..+.+.+.++.+. +
T Consensus 219 l~~~~~~i--~~~~~~~~~~--------------------~~~~~~~~~~~~gl-~aAl~~~~--~~~~~~~~~~~~~-~ 272 (363)
T TIGR01437 219 VLGKKKYI--EWVKLQSKGI--------------------GRAMKVGKENILGL-TAALEQYL--STGKESGAEMVAK-L 272 (363)
T ss_pred EEEcHHHH--HHHHhccCCC--------------------cceeccCHHHHHHH-HHHHHHHH--ccCcccHHHHHHH-H
Confidence 88877663 3332322221 12234556555444 34566653 4566666666654 6
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCc----ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcC--eeeecCCCCC
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQ----AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFG--IQARGGCACA 462 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~----~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~g--I~v~~G~~~~ 462 (625)
+++.++|.++|+++++.+.+.... ..++|.. ++.++++.++.+.|.+ ++ |.+|. ++.
T Consensus 273 ~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~--------------~~~g~~~~~l~~~L~~-~~~~I~~r~--~~~ 335 (363)
T TIGR01437 273 TPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDE--------------SELGMTAADVVQALRQ-GEPAIYTRG--YKA 335 (363)
T ss_pred HHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEec--------------cCCCCCHHHHHHHHhc-CCCCEEEee--eee
Confidence 689999999999998854221111 1122222 1235678899999954 46 77763 110
Q ss_pred chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 463 GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..+.+|+++.. ++++|++.++++|+++
T Consensus 336 -----------------------------~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 336 -----------------------------NEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred -----------------------------cCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 24789999975 5699999999999876
No 60
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=9.5e-25 Score=235.01 Aligned_cols=328 Identities=15% Similarity=0.129 Sum_probs=222.4
Q ss_pred chHHHHHHHHHhhCCC-CCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 89 SLRYIEDYIINNVLPF-YGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~-~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
.++.+.+++.+.+..+ ++++.+. +.. +..+...++++.+++++|.+ + .++|+ +|+ .++..++.++
T Consensus 53 ~~~~v~~~~~~~~~~~~~~~~~s~-~~~--G~~~~~~~le~~ia~~~g~~-~-~ii~~-~~~-~a~~~~~~~l------- 118 (393)
T TIGR01822 53 SHPDLIQAAKDALDEHGFGMSSVR-FIC--GTQDIHKELEAKIAAFLGTE-D-TILYA-SCF-DANGGLFETL------- 118 (393)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcC-ccc--CChHHHHHHHHHHHHHhCCC-c-EEEEC-chH-HHHHHHHHHh-------
Confidence 3668888888888653 4444432 222 23567788999999999984 2 45553 454 6666776665
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh-CCCCeEEEEecccCcc
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA-AKRPMLGSFSACSNVT 246 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~-~~~~~lv~~~~~~n~T 246 (625)
+++||. |++++.+|+++...++..+++.+.++ .+|+++|++++++... ..++++|++++++|+|
T Consensus 119 --------~~~gd~--vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~t 183 (393)
T TIGR01822 119 --------LGAEDA--IISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMD 183 (393)
T ss_pred --------CCCCCE--EEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCC
Confidence 578885 99999999999988888887765543 3689999999974211 1278999999999999
Q ss_pred ccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCC----CC-CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCC
Q 043646 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRS----RN-IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSS 321 (625)
Q Consensus 247 G~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~----~~-~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~ 321 (625)
|.+.|+++|+++|++||+++++|++|+.|........ .+ ..++|+++.|+||+++|+. .|++++++++.. .+
T Consensus 184 G~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r-~G~~~~~~~~~~--~l 260 (393)
T TIGR01822 184 GVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGAS-GGFTTARKEVVE--LL 260 (393)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCC-cEEEEeCHHHHH--HH
Confidence 9999999999999999999999999987765322110 11 1257999999999998776 499998877632 22
Q ss_pred CCcccCCceEEeeccccccccccccchhhhhcCCChhHHH--HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC
Q 043646 322 PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQ--MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ 399 (625)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~--~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 399 (625)
.+... . . ...++.+... .+.++++.+ + ..+.+.++.+.+++++.+.|.++
T Consensus 261 ~~~~~---~-------------------~-~~~~~~~~~~~~a~~~al~~~--~--~~~~~~~~~~~~~~~l~~~L~~~- 312 (393)
T TIGR01822 261 RQRSR---P-------------------Y-LFSNSLPPAVVGASIKVLEML--E--ASNELRDRLWANTRYFRERMEAA- 312 (393)
T ss_pred HHhCc---c-------------------c-eecCCCCHHHHHHHHHHHHHH--h--cCHHHHHHHHHHHHHHHHHHHHc-
Confidence 11000 0 0 0112322222 223334433 1 34567788888999999999875
Q ss_pred cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHH
Q 043646 400 NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479 (625)
Q Consensus 400 gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~ 479 (625)
++++..+ ..+++.+...+. ....++++.|.+ .||.+. +..+. ....
T Consensus 313 g~~~~~~----~~~~~~i~~~~~---------------~~~~~l~~~L~~-~gI~v~-~~~~~--~~~~----------- 358 (393)
T TIGR01822 313 GFDIKPA----DHPIIPVMLYDA---------------VLAQRFARRLLE-EGIYVT-GFFYP--VVPK----------- 358 (393)
T ss_pred CCCCCCC----CCCEEEEEeCCH---------------HHHHHHHHHHHH-CCeeEe-eeCCC--CCCC-----------
Confidence 6665433 235555443221 124578888866 599997 33221 0000
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 480 ~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
....+|+|+++++|++|+++++++|+++..+
T Consensus 359 ------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 359 ------------GQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred ------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 1256999999999999999999999988654
No 61
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.94 E-value=9.4e-25 Score=246.25 Aligned_cols=361 Identities=16% Similarity=0.130 Sum_probs=244.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
.+.++.+.+.++++++++++|.+.. .+.-++|+.+.+..++...... . . -....+.+|+++...|+++
T Consensus 537 ~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh-~----~-----~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 537 QAEGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQGEYAGLLAIRRYH-R----S-----RGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred hhcCHHHHHHHHHHHHHHHHCCCeE--eecCCchHHHHHHHHHHHHHHH-H----h-----cCCCCCCEEEecccccccC
Confidence 3567888999999999999999744 2343355555433333322100 0 0 0112244799999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 195 LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
...+...|++++.++.+++|.+|+++|++++++. .+++.+|.++++++..+...|+++|++++|++|+++++|+|+..
T Consensus 605 pasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~--~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~ 682 (954)
T PRK12566 605 PASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAA--GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLN 682 (954)
T ss_pred HHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhcc--CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChh
Confidence 8888889999999999989999999999999731 25788889999888877778899999999999999999999998
Q ss_pred CCcccc-CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 275 PYVKIN-LRSRNIDGYDAIFLATHKFLGGPGTPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 275 g~~~id-~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
+...++ ..++ |+|++++++||||++|.|.|..++.. .. .+.+.|+..++..++.. ..+-
T Consensus 683 a~~~l~~Pg~~---GADi~~~s~HKtf~~P~G~GGP~vG~iav--~~~L~pfLp~~P~~d~~--------------G~~~ 743 (954)
T PRK12566 683 AQVGLARPADI---GADVSHMNLHKTFCIPHGGGGPGMGPIGV--RAHLAPFVANHPVVPVE--------------GPDP 743 (954)
T ss_pred hccCCCChhhc---CCCEEEecCCcccCcCccCCCCccchhhh--hhhhhhhccCCCCcCCC--------------CCCC
Confidence 777766 3555 99999999999999887766666554 22 12233444433211100 0000
Q ss_pred cCCCh-----hHHHHHHHHHHHHHHhhcCHHHHHHHH--HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEec-cCCC
Q 043646 353 NGGTP-----QIVQMIRAALAFWVKEYIGYEVIKKQE--DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY-STTN 424 (625)
Q Consensus 353 ~~gt~-----~~~~~~~aal~~~~~~~~g~~~i~~~~--~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~-~~~~ 424 (625)
+.|+. +...++..+..|+ ..+|.+..+.+. ..+++|+.++|.+..++.. .+. ..+ -..-|.+. ...
T Consensus 744 r~ga~S~~~~gsa~~l~~A~~Yi--~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~-~~~-~~~-~~hEfii~~~~l- 817 (954)
T PRK12566 744 NNGAVSAAPWGSASILPISWMYI--AMMGPQLADASEVAILSANYLANQLGGAFPVLY-RGR-NER-VAHECILDLRPL- 817 (954)
T ss_pred CCCceeecccchHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCc-CCC-CCC-eeeEEEEEcccc-
Confidence 12332 1222334455555 567877334344 6689999999976433333 221 111 01112111 111
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
....+.+..++.+.|. ++||....-. + | .++.+||+++.++
T Consensus 818 --------~~~~g~~~~dvakRL~-d~Gihapt~~-f--P---------------------------v~~~LmIepTE~e 858 (954)
T PRK12566 818 --------KAQTGISEEDVAKRLM-DYGFHAPTMS-F--P---------------------------VPGTLMVEPTESE 858 (954)
T ss_pred --------ccccCCCHHHHHHHHH-HCCcEEeEEe-e--c---------------------------cCCEEEEEeeeeC
Confidence 1123456778999998 5899875421 1 1 1488999999999
Q ss_pred CHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccccchh------hhhhhhcccccCCc
Q 043646 505 SNEEFEFILAALEFIAAYGHRFLPLYHFNVKAGNWCSSQKAIK------DLIDKETNNNINNP 561 (625)
Q Consensus 505 t~edid~ll~aL~~~~~~~~~~~~~y~~~~~~~~w~~~~~~~~------~~~~~~~~~~~~~~ 561 (625)
+++|+|+|+++|+.+.++..+ +++|.|...+++|| .+++.+|-..|+..
T Consensus 859 skeEIDrf~eAL~~I~~e~~~--------v~~g~~~~~~n~l~~apht~~~~~~~w~~~y~r~ 913 (954)
T PRK12566 859 SKAELDRFVEAMLSIRAEIGK--------VQEGNWPAEDNPLKRAPHTLADVTGVWQRPYSIE 913 (954)
T ss_pred CHHHHHHHHHHHHHHHHHHHH--------HHcCCCCcccCcccCCCCchHHhhccCCCCcChh
Confidence 999999999999999999766 88999999999988 34677887655554
No 62
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.3e-24 Score=228.16 Aligned_cols=344 Identities=13% Similarity=0.026 Sum_probs=231.3
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal 153 (625)
+.++|+.+... ++|+.+.+++.+.+.. +....|....+..++.+.+++++++.+|.. +.++|++| +|++.++
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t-~G~~~~l 102 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLAN----PENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVT-AGSNMAF 102 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhC----CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEe-CChHHHH
Confidence 46777776654 5678899998876632 111123333445678888999999999974 23478888 7888888
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~ 233 (625)
..++.++ +++||. |+++.+.|..+...++..|++++.++.+.++.+|+++|+++++ ++
T Consensus 103 ~~~~~~~---------------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----~~ 160 (389)
T PRK05957 103 MNAILAI---------------TDPGDE--IILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-----PK 160 (389)
T ss_pred HHHHHHh---------------cCCCCE--EEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-----cC
Confidence 8887766 478885 8888888888877778889999999998777899999999987 57
Q ss_pred CeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc-c---ccCCCC-CCCCCcEEEEcCCCCCCCCC-
Q 043646 234 PMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-K---INLRSR-NIDGYDAIFLATHKFLGGPG- 304 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~-~---id~~~~-~~~~~D~v~~S~hK~lggp~- 304 (625)
+++|++++++||||.+.| +++|+++|+++|+++++|+++.--.. . ...... ....-.+++.|++|.+|.|+
T Consensus 161 ~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 240 (389)
T PRK05957 161 TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW 240 (389)
T ss_pred ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc
Confidence 999999999999999988 88899999999999999999652111 0 011010 01123467789999997554
Q ss_pred CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-hcCHHHHHHH
Q 043646 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE-YIGYEVIKKQ 383 (625)
Q Consensus 305 g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~-~~g~~~i~~~ 383 (625)
.+|++++++++. +.+.... .....+++...+.+ +..++ .+ ....++..++
T Consensus 241 RiG~~~~~~~~~--~~~~~~~------------------------~~~~~~~~~~~q~~--~~~~l-~~~~~~~~~~~~~ 291 (389)
T PRK05957 241 RIGYMVIPIHLL--EAIKKIQ------------------------DTILICPPVVSQYA--ALGAL-QVGKSYCQQHLPE 291 (389)
T ss_pred eeEEEecCHHHH--HHHHHHH------------------------hhcccCCCcHHHHH--HHHHH-hCChHHHHHHHHH
Confidence 389999987762 2221100 00111223333322 12222 11 1113444555
Q ss_pred HHHHHHHHHHhhCCCCcE-EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC
Q 043646 384 EDVYIESALGRILPNQNI-QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA 462 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~ 462 (625)
.++.++++.+.|.+++++ .+..+ .++.+.+.-.+. +++..++++.|.+++||.+++|..|+
T Consensus 292 ~~~~r~~l~~~L~~~~~~~~~~~~----~gg~~~~~~~~~--------------~~~~~~~~~~l~~~~gv~v~pg~~f~ 353 (389)
T PRK05957 292 IAQVRQILLKSLGQLQDRCTLHPA----NGAFYCFLKVNT--------------DLNDFELVKQLIREYRVAVIPGTTFG 353 (389)
T ss_pred HHHHHHHHHHHHHhcCCCccccCC----CeeEEEEEeCCC--------------CCChHHHHHHHHHHCCEEEccchhhC
Confidence 667788888888877664 44333 334444433332 24567888888777899999988764
Q ss_pred chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 463 GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+ .++++|||++.. ++++++..++.|.+.+.+
T Consensus 354 ~~---------------------------~~~~iRis~~~~-~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 354 MK---------------------------NGCYLRIAYGAL-QKATAKEGIERLVQGLKT 385 (389)
T ss_pred CC---------------------------CCCEEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 11 147999999753 677888888777776554
No 63
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=2.6e-24 Score=232.60 Aligned_cols=328 Identities=13% Similarity=0.109 Sum_probs=220.6
Q ss_pred eccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 043646 80 YADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEV 159 (625)
Q Consensus 80 Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (625)
|||.+ ..+.|.+++.+.+..+..+++....... ......++++.+++++|.+ .++|+++|+.+ ...++.+
T Consensus 64 YL~l~----~~p~v~~a~~~~~~~~~~~~~~s~~~~~--~~~~~~~le~~la~~~g~~---~~~~~~sG~~A-n~~~l~~ 133 (407)
T PRK07179 64 YLNLS----GHPDIIKAQIAALQEEGDSLVMSAVFLH--DDSPKPQFEKKLAAFTGFE---SCLLCQSGWAA-NVGLLQT 133 (407)
T ss_pred ccCCC----CCHHHHHHHHHHHHHhCCCCCccccccC--CchHHHHHHHHHHHHhCCC---cEEEECCHHHH-HHHHHHH
Confidence 55544 3467888888888766556543221111 1235667889999999984 35677666665 4555555
Q ss_pred hcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEE
Q 043646 160 MGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSF 239 (625)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~ 239 (625)
+ ..+|+. |+++..+|.+....++..|++++.++. .|+++|++++++ .++++|++
T Consensus 134 l---------------~~~g~~--v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~----~~~~lV~v 187 (407)
T PRK07179 134 I---------------ADPNTP--VYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIER----HGPGIIVV 187 (407)
T ss_pred h---------------CCCCCE--EEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHh----cCCeEEEE
Confidence 5 356764 888999999998888888888766643 489999999973 25789999
Q ss_pred ecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc----CCCCCC-CCCcEEEEcCCCCCCCCCCceEEEEecc
Q 043646 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN----LRSRNI-DGYDAIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 240 ~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id----~~~~~~-~~~D~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
++++|+||.+.|+++|.++|+++|+++++|++|+.|....+ +...+. .++|+++.|+||++|++ +|+++++++
T Consensus 188 ~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~--~G~l~~~~~ 265 (407)
T PRK07179 188 DSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGR--AGIITCPRE 265 (407)
T ss_pred CCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhcc--CeEEEeCHH
Confidence 99999999999999999999999999999999987654222 111111 25799999999999853 699998877
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHH--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM--IRAALAFWVKEYIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~l~ 392 (625)
+.. .+..... . ....+|++...+ +.++++.. +. .+.+.++.+.++++++
T Consensus 266 ~~~--~~~~~~~----------------------~-~~~~~t~~~~~~aa~~aal~~~--~~--~~~~~~~l~~~~~~l~ 316 (407)
T PRK07179 266 LAE--YVPFVSY----------------------P-AIFSSTLLPHEIAGLEATLEVI--ES--ADDRRARLHANARFLR 316 (407)
T ss_pred HHH--HHHHhCc----------------------C-eeeCCCCCHHHHHHHHHHHHHH--hc--CHHHHHHHHHHHHHHH
Confidence 622 1110000 0 001234333322 23334443 11 2456778888999999
Q ss_pred HhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 393 GRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
+.|.++ ++++.++ .+++.+..... .....+.+.|.+ +||.+. .+|. |...
T Consensus 317 ~~L~~~-g~~v~~~-----~~i~~l~~~~~---------------~~~~~~~~~L~~-~GI~~~--~~~~-p~~~----- 366 (407)
T PRK07179 317 EGLSEL-GYNIRSE-----SQIIALETGSE---------------RNTEVLRDALEE-RNVFGA--VFCA-PATP----- 366 (407)
T ss_pred HHHHHc-CCCCCCC-----CCEEEEEeCCH---------------HHHHHHHHHHHH-CCceEe--eecC-CCCC-----
Confidence 999887 6766532 35665553211 013467777754 799854 2232 1100
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..++.+||+++.++|++|+++++++|++++.+
T Consensus 367 ------------------~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 367 ------------------KNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred ------------------CCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 02478999999999999999999999998776
No 64
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.94 E-value=8.3e-24 Score=227.70 Aligned_cols=338 Identities=16% Similarity=0.155 Sum_probs=236.7
Q ss_pred CCCCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHH
Q 043646 45 PPHSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVH 124 (625)
Q Consensus 45 ~~~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~ 124 (625)
++...+.+..++++..+.+-.....+ | ++..++-....+.+++.+.+.+...+.. |. .++...+.+..+.+
T Consensus 34 p~~g~p~~~v~~~l~~~~~~d~~~~~---~-~p~~~~~~~~~~~~~~~a~~~~~~~~~~---nl--~d~~~~p~a~~~E~ 104 (460)
T COG0076 34 PEKGEPLEEVLDELAELLIKDELYLD---G-HPRANLAGFCPTRVPPVAAELLVSALNK---NL--GDPDESPAAAELEE 104 (460)
T ss_pred CccCCchhhHHHHHHHHhhccccccc---C-CcceEEEccCCCCCHHHHHHHHHHHHhh---cC--CCcccChhHHHHHH
Confidence 34447777888888887433222222 1 2334555555566777777777776643 22 22334567889999
Q ss_pred HHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhh-ccCCCCceEEEEcCCCCchhHHHHHHcCC
Q 043646 125 EASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLIT-SLRDEERWVVFLGPYEHHSNLLSWRQSLA 203 (625)
Q Consensus 125 ~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~-~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (625)
++..++++++|.+..-...||.+||.+++..+..+.... +..... ...+++.++|+++...|+|..++++..|.
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~-----~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~ 179 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERW-----RKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGL 179 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHH-----HHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCC
Confidence 999999999999744367888778888887776665322 111111 23344566899999999999999999999
Q ss_pred eEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCC
Q 043646 204 EVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLR 282 (625)
Q Consensus 204 ~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~ 282 (625)
+++.+++++ +..+|+++|+++|+++...+ +|+.+.++++||.++|+++|+++|+++++|+|||+|.+....++.-.
T Consensus 180 ~~~~v~~~~~~~~id~~~l~~~i~~~t~~g---~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~ 256 (460)
T COG0076 180 GLRRVPTVPTDYRIDVDALEEAIDENTIGG---VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEP 256 (460)
T ss_pred CceeEEeccCccccCHHHHHHHHHhhccCc---eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCc
Confidence 999999988 78999999999999632211 58999999999999999999999999999999999988766654322
Q ss_pred ----CCCCCCCcEEEEcCCCCCCCCCCceEEEEecc-ccc-cCCCCCcccCC-ceEEeeccccccccccccchhhhhcCC
Q 043646 283 ----SRNIDGYDAIFLATHKFLGGPGTPGILLISKA-LYQ-LGSSPPSTCGG-GTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 283 ----~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~-~~~-l~~~~p~~~gg-g~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
....+++|++++++|||+..|.|+|+++++++ .++ .......+.++ ...++ -..+
T Consensus 257 ~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~------------------ti~~ 318 (460)
T COG0076 257 DGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNF------------------TILG 318 (460)
T ss_pred cchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCce------------------eEee
Confidence 12345899999999999999999999999988 321 11122222222 11110 1123
Q ss_pred ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEec
Q 043646 356 TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420 (625)
Q Consensus 356 t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~ 420 (625)
+.+-...+.+-..+......|+..+.++..++++++.+.|.+++.++++.+. .+++++|...
T Consensus 319 sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p---~l~~V~fr~~ 380 (460)
T COG0076 319 SRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEP---ELPIVAFRLK 380 (460)
T ss_pred ccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC---ccceEEEEcC
Confidence 3332222222222222245677888999999999999999999889999864 7899999983
No 65
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4.5e-24 Score=228.85 Aligned_cols=338 Identities=16% Similarity=0.069 Sum_probs=230.1
Q ss_pred eEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHH
Q 043646 78 LTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sGttaal~ 154 (625)
.+.|+.+.. .++++.+.+++.+.+... .. .|....+..++.+.+.+++++.+| .+++ +|++| +|+++++.
T Consensus 26 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~~-~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-~i~~t-~g~~~al~ 98 (382)
T PRK06108 26 VLPLWFGESDLPTPDFIRDAAAAALADG----ET-FYTHNLGIPELREALARYVSRLHGVATPPE-RIAVT-SSGVQALM 98 (382)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-eEEEe-CChHHHHH
Confidence 444444332 344678888887766431 11 122223355677777777877778 5555 78888 78888898
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC---CCCCCHHHHHHHHHHhhhC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD---NGLLDIEALRSQLELYKAA 231 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~---~~~ld~~~L~~~l~~~~~~ 231 (625)
.++..+ +++||+ |+++.+.|+.+...++..|++++.++.+. ++.+|+++|+++++
T Consensus 99 ~~~~~l---------------~~~gd~--vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~----- 156 (382)
T PRK06108 99 LAAQAL---------------VGPGDE--VVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT----- 156 (382)
T ss_pred HHHHHh---------------cCCCCE--EEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-----
Confidence 888776 478885 88889999988888888999999999874 24689999999886
Q ss_pred CCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCcc--------ccCCCCCCCCCcEEEEcCCCCC
Q 043646 232 KRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVK--------INLRSRNIDGYDAIFLATHKFL 300 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~~--------id~~~~~~~~~D~v~~S~hK~l 300 (625)
++++++++++++||||.+.+ +++|+++|+++|+++++|++++..... .++.. .....+++.|++|.+
T Consensus 157 ~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~ 234 (382)
T PRK06108 157 PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE--PDDRIIFVNSFSKNW 234 (382)
T ss_pred ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC--CcCCEEEEeechhhc
Confidence 57899999999999999876 578899999999999999996643221 11111 112357788999998
Q ss_pred CCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHH
Q 043646 301 GGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEV 379 (625)
Q Consensus 301 ggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~ 379 (625)
|.|+ .+|++++++++. +.+.... .....+.+.+.+. ++...+.......+.
T Consensus 235 g~~G~RiG~~~~~~~~~--~~~~~~~------------------------~~~~~~~~~~~q~--a~~~~l~~~~~~~~~ 286 (382)
T PRK06108 235 AMTGWRLGWLVAPPALG--QVLEKLI------------------------EYNTSCVAQFVQR--AAVAALDEGEDFVAE 286 (382)
T ss_pred cCcccceeeeeCCHHHH--HHHHHHH------------------------HhcccCCChHHHH--HHHHHHhCChHHHHH
Confidence 7554 489999987762 2221100 0001122233221 222222111112456
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCC
Q 043646 380 IKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGC 459 (625)
Q Consensus 380 i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~ 459 (625)
++++.+.+++++.+.|.+++++++..+ .++.+.+...+.. .+..++++.|.+++||.+++|.
T Consensus 287 ~~~~~~~~~~~l~~~L~~~~~~~~~~p----~~g~~~~~~l~~~--------------~~~~~~~~~ll~~~gV~v~pg~ 348 (382)
T PRK06108 287 LVARLRRSRDHLVDALRALPGVEVAKP----DGAMYAFFRIPGV--------------TDSLALAKRLVDEAGLGLAPGT 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCC----CeeEEEEEeCCCC--------------CCHHHHHHHHHHhCCEEEeCch
Confidence 677888888999999988888887655 3455555444321 2356788888777899999887
Q ss_pred CCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 460 ACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.|... .++++|||++. ++++++..++.|+++++
T Consensus 349 ~f~~~---------------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 349 AFGPG---------------------------GEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred hhCCC---------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 65311 24899999987 88999999999987653
No 66
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.93 E-value=8.9e-24 Score=212.51 Aligned_cols=334 Identities=15% Similarity=0.108 Sum_probs=246.4
Q ss_pred CcchHHHHHHHHHhhCC-CCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccc
Q 043646 87 GRSLRYIEDYIINNVLP-FYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~-~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~ 164 (625)
.+.|+.|.+++.+.+.. .++.| ....++.+.+..|.++.++..... .|+|+ .|..-+|..+++++.
T Consensus 37 f~~pp~i~~Al~~rvdhGvfGY~--------~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~-p~VVpgi~~~I~~~T--- 104 (388)
T COG1168 37 FPTPPEIIEALRERVDHGVFGYP--------YGSDELYAAIAHWFKQRHQWEIKPEWIVFV-PGVVPGISLAIRALT--- 104 (388)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCC--------CCCHHHHHHHHHHHHHhcCCCCCcceEEEc-CcchHhHHHHHHHhC---
Confidence 46788999999998853 23333 335678899999999999886432 67776 788889999999884
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CC--CCCHHHHHHHHHHhhhCCCCeEEEEec
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NG--LLDIEALRSQLELYKAAKRPMLGSFSA 241 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~--~ld~~~L~~~l~~~~~~~~~~lv~~~~ 241 (625)
++||. |++..+.|+.+.......|.+++..|+-. ++ .+|.++|++++.+ ++++++++|+
T Consensus 105 ------------~~gd~--Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~----~~vkl~iLCn 166 (388)
T COG1168 105 ------------KPGDG--VVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD----ERVKLFILCN 166 (388)
T ss_pred ------------cCCCe--eEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc----CCccEEEEeC
Confidence 78997 77777777777788888999999999863 44 6799999999985 5789999999
Q ss_pred ccCccccc---cCHHHHHHHHHHcCCEEEEeccCcC----CCccccCCCCCCCCC--cEEEEcCCCCCCCCC-CceEEEE
Q 043646 242 CSNVTGIY---SDTRSIARLLHQYGGFACFDFAASG----PYVKINLRSRNIDGY--DAIFLATHKFLGGPG-TPGILLI 311 (625)
Q Consensus 242 ~~n~TG~~---~~l~~I~~la~~~g~~vivD~A~~~----g~~~id~~~~~~~~~--D~v~~S~hK~lggp~-g~G~l~v 311 (625)
|+||||.+ ..++.|+++|.+||+.||.|+.|+- |+..+.+..+..... -+.+.|++|.|+-++ .++.+++
T Consensus 167 PHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii 246 (388)
T COG1168 167 PHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIII 246 (388)
T ss_pred CCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEe
Confidence 99999998 5688899999999999999999883 333343333322223 466678999998665 3677777
Q ss_pred eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 043646 312 SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESA 391 (625)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l 391 (625)
.++..+.+ +... -.+...+.++.+++++.-.++- ......+.+.++.+.+.+++
T Consensus 247 ~n~~lr~~------------------------~~~~-l~~~~~~~~n~lg~~A~~aAY~-~G~~WLd~L~~yl~~N~~~~ 300 (388)
T COG1168 247 SNRELRAK------------------------FLKR-LKRNGLHGPSALGIIATEAAYN-QGEPWLDELLEYLKDNRDYV 300 (388)
T ss_pred cCHHHHHH------------------------HHHH-HHHhcCCCCchHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHH
Confidence 76652210 1111 1122345678888765544443 12234668889999999999
Q ss_pred HHhhCC-CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 392 LGRILP-NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 392 ~~~L~~-l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
.+.|.+ +|++++..|++ .-+.+.-+ ++.+++.+++.+.|+++.+|.+..|..|+..
T Consensus 301 ~~~l~~~~P~v~v~~p~g----TYL~WLD~-------------r~l~l~d~~l~~~ll~~akVal~~G~~FG~~------ 357 (388)
T COG1168 301 ADFLNKHLPGVKVTEPQG----TYLAWLDC-------------RELGLDDSELAEFLLEEAKVALSPGSTFGEE------ 357 (388)
T ss_pred HHHHHhhCCCcEEecCCC----ceeeeeec-------------cccCCChHHHHHHHHHhhcEeccCCCccCcC------
Confidence 999975 69999998862 33333332 4567777899999999999999999988621
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..|++|++++ ++.+-+++.++.|+..+..
T Consensus 358 ---------------------g~gf~RlN~a--cpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 358 ---------------------GSGFVRLNFA--CPRAILEEALERLKRALKK 386 (388)
T ss_pred ---------------------CCceEEEecC--CCHHHHHHHHHHHHHHHhc
Confidence 2499999997 5778888888888766543
No 67
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.93 E-value=2.6e-24 Score=227.65 Aligned_cols=324 Identities=16% Similarity=0.074 Sum_probs=218.2
Q ss_pred hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhh
Q 043646 90 LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMR 169 (625)
Q Consensus 90 p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (625)
++.|.+++.+.+..+ ++... .+.........++++++.+++++|++ + .++++ +|+.+++ .++.++
T Consensus 17 ~~~v~~a~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~-~-~iv~~-sg~~a~~-~~~~~~--------- 81 (349)
T cd06454 17 HPEVIEAAKEALDKY-GVGAG-GSRLISGTSDLHEELEEELAEFHGKE-A-ALVFS-SGYAAND-GVLSTL--------- 81 (349)
T ss_pred CHHHHHHHHHHHHHh-CCCCC-CcCeecCCchHHHHHHHHHHHHhCCC-C-EEEec-cHHHHHH-HHHHHh---------
Confidence 678999999988653 33322 11111234667788999999999975 2 45554 6766544 444444
Q ss_pred hhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc
Q 043646 170 DKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY 249 (625)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~ 249 (625)
+++||+ |+++.++|+++...++..|++++.++. +|.+++++++++.....+++++++++++|+||.+
T Consensus 82 ------~~~gd~--Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~ 148 (349)
T cd06454 82 ------AGKGDL--IISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDI 148 (349)
T ss_pred ------cCCCCE--EEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCc
Confidence 467885 999999999998888889999988763 4788899988742112467899999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEeccCcCCCccccCC-----CCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCc
Q 043646 250 SDTRSIARLLHQYGGFACFDFAASGPYVKINLR-----SRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPS 324 (625)
Q Consensus 250 ~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~-----~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~ 324 (625)
.|+++|+++|+++|+++|+|++++.|....... .....+.|+++.|+||+++. .| |+++.++++. +.+.+.
T Consensus 149 ~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~~~~~--~~~~~~ 224 (349)
T cd06454 149 APLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGSKELI--DYLRSY 224 (349)
T ss_pred cCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECCHHHH--HHHHHh
Confidence 999999999999999999999998765432110 01123779999999999985 44 7887777662 211110
Q ss_pred ccCCceEEeeccccccccccccchhhhh-cCCChhH--HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE
Q 043646 325 TCGGGTVNYVNAFDEKDTLYLEDIEERE-NGGTPQI--VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI 401 (625)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~~~-~~gt~~~--~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv 401 (625)
. ..+ ..++.+. ...+.++++.. .. .+.+.++.+.+++++.+.|.++ ++
T Consensus 225 ~------------------------~~~~~~~~~~~~~~~a~~~~l~~~--~~--~~~~~~~~~~~~~~l~~~l~~~-g~ 275 (349)
T cd06454 225 A------------------------RGFIFSTSLPPAVAAAALAALEVL--QG--GPERRERLQENVRYLRRGLKEL-GF 275 (349)
T ss_pred c------------------------hhhhccCCCCHHHHHHHHHHHHHH--hc--CHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 0 001 1122222 22334445544 22 3566788888999999999876 66
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHH
Q 043646 402 QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIR 481 (625)
Q Consensus 402 ~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~ 481 (625)
+++.+. ...++.+...++ .+..++.+.|.+ .||.++++.....+.
T Consensus 276 ~~~~~~---~~~~~~~~~~~~---------------~~~~~~~~~L~~-~gI~~~~~~~~~~~~---------------- 320 (349)
T cd06454 276 PVGGSP---SHIIPPLIGDDP---------------AKAVAFSDALLE-RGIYVQAIRYPTVPR---------------- 320 (349)
T ss_pred cccCCC---CCcEEEEeCCCh---------------HHHHHHHHHHHh-CCceEEEecCCccCC----------------
Confidence 666542 122333322211 135678888866 499998642211000
Q ss_pred HHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 482 SAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 482 ~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..+++||+++.+++++|+++++++|+++
T Consensus 321 ----------~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 321 ----------GTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ----------CCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1378999999999999999999999864
No 68
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.93 E-value=4e-24 Score=230.88 Aligned_cols=345 Identities=17% Similarity=0.141 Sum_probs=222.9
Q ss_pred CCCCCcchHHHHHHHHHhhCCCC--CCCCCCcchhhHHHH-HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHH
Q 043646 83 HTASGRSLRYIEDYIINNVLPFY--GNTHTSDSYVGQRMT-KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEV 159 (625)
Q Consensus 83 ~~~~~~~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~~~-~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~ 159 (625)
+++.+..++.|.+++.+.+...+ ++++...+ .+.... .+.+.+++.+++++|++.. .|+++ +|+ .++..++.+
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~-~~~~~~~~l~~~~~~~~~~~~g~~~~-~v~~~-sgt-~a~~~~l~~ 100 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNKYAEGYPGKRYY-GGCEYVDEIEDLAIERAKKLFGAEYA-NVQPH-SGS-QANLAVYFA 100 (402)
T ss_pred eccCCcCCHHHHHHhcccccccccCCCCCCccc-CCchHHHHHHHHHHHHHHHHhCCCce-eeecC-CcH-HHHHHHHHH
Confidence 34446678899999987764333 56654322 333333 4444478889999999754 56555 565 567777777
Q ss_pred hcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH-----HHHcCCeEEEEecCC---CCCCCHHHHHHHHHHhhhC
Q 043646 160 MGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-----WRQSLAEVVEIGLDD---NGLLDIEALRSQLELYKAA 231 (625)
Q Consensus 160 l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-----~~~~G~~vv~v~~~~---~~~ld~~~L~~~l~~~~~~ 231 (625)
+ +++||+ |++++++|+++... ++..|++++.++++. ++.+|++++++++..
T Consensus 101 l---------------~~~Gd~--Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~---- 159 (402)
T cd00378 101 L---------------LEPGDT--IMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE---- 159 (402)
T ss_pred h---------------cCCCCE--EEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh----
Confidence 6 578886 88888888776543 445688777777643 578999999999864
Q ss_pred CCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEE
Q 043646 232 KRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLI 311 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v 311 (625)
++++++++++++| |...|+++|+++||++|+++++|++|+.+....+.......++|+++.|+||+|+||.| |+++.
T Consensus 160 ~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~g-g~i~~ 236 (402)
T cd00378 160 FKPKLIVAGASAY--PRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRG-GLILT 236 (402)
T ss_pred CCCCEEEecCccc--CCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCc-eEEEe
Confidence 4789998887765 56789999999999999999999998765432111010011569999999999987876 77777
Q ss_pred ec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 312 SK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 312 ~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
++ ++. +.+.... .....+++....+.. .++.... ..+.+...++..+++
T Consensus 237 ~~~~~~--~~l~~~~------------------------~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~ 288 (402)
T cd00378 237 RKGELA--KKINSAV------------------------FPGLQGGPHLHVIAAKAVALKEAL--EPEFKAYAKQVVENA 288 (402)
T ss_pred ccHHHH--HHHHHHh------------------------CccccCCchHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHH
Confidence 66 552 1211000 000123332222222 2222221 124556677888889
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
+++.+.|.++ |++++... ..+.+.+...++. +.+..++.+.| +++||.++.+.....+.+.
T Consensus 289 ~~l~~~L~~~-g~~~~~~~---~~~~~v~v~~~~~-------------~~~~~~~~~~l-~~~gI~v~~~~~p~~~~~~- 349 (402)
T cd00378 289 KALAEALKER-GFKVVSGG---TDNHLVLVDLRPK-------------GITGKAAEDAL-EEAGITVNKNTLPWDPSSP- 349 (402)
T ss_pred HHHHHHHHhC-CCeEeecC---CCCeEEEEeCCcc-------------CCCHHHHHHHH-HHcCcEEcCCcCCCCCCCC-
Confidence 9999999887 78776321 1234443333321 12345666666 5689999875443321100
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHhhh
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY----MSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~----~t~edid~ll~aL~~~~~~~~ 524 (625)
..+.++|++++.. ++++|++.+++.|++++.+..
T Consensus 350 ----------------------~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 350 ----------------------FVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred ----------------------CCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 0246899999764 479999999999999887654
No 69
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.93 E-value=1.3e-23 Score=241.87 Aligned_cols=364 Identities=14% Similarity=0.070 Sum_probs=256.6
Q ss_pred CCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCc----chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHH
Q 043646 47 HSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGR----SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKM 122 (625)
Q Consensus 47 ~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~----~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~ 122 (625)
...+..+.+..+++.-. ++.+|+++.+.|. .|..|.+++.+...- +..-+...-..+.+..+.
T Consensus 83 ~~~sE~e~~~~~~~la~------------kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~-~TaytPYqaEisQG~lqa 149 (993)
T PLN02414 83 EGLTESQMLEHMKSLAS------------KNKVFKSYIGMGYYNTHVPPVILRNILENPGW-YTQYTPYQAEIAQGRLES 149 (993)
T ss_pred CCCCHHHHHHHHHHHHh------------cCCccccccCCCCCCccCCHHHHHHHHhChHH-HhhcCCCchHHHHHHHHH
Confidence 45555666666666542 3456888888888 777777888764421 111111111234667788
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH--
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ-- 200 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-- 200 (625)
..+.+..|++++|.+.+ ++.++ .++|++...++.++. +.+|++..|+++..+|+++...|+.
T Consensus 150 l~~~Qt~ia~LtG~~~a-naSL~-d~aTAaaea~~~a~~--------------~~~g~~~~VlVs~~~hP~~~~v~~t~a 213 (993)
T PLN02414 150 LLNYQTMITDLTGLPMS-NASLL-DEGTAAAEAMAMCNN--------------ILKGKKKKFLIASNCHPQTIDVCQTRA 213 (993)
T ss_pred HHHHHHHHHHHhCCChh-hEeec-CChHHHHHHHHHHHh--------------cccCCCCEEEEcCccCHhHHHHHHHhh
Confidence 89999999999999988 78888 678888887776663 4555444699999999999988854
Q ss_pred --cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc
Q 043646 201 --SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK 278 (625)
Q Consensus 201 --~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~ 278 (625)
.|++|+.++.+.. + ... +.+ +.++.+..|.+|.+.|+++|+++||++|+++++ +|+..+...
T Consensus 214 ~~~GieV~~v~~~~~---~------~~~-----~~v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~ 277 (993)
T PLN02414 214 DGLGLEVVVADEKDF---D------YSS-----GDV-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTM 277 (993)
T ss_pred hhcCCEEEEecchhh---c------ccc-----Cce-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcC
Confidence 4899999987431 1 111 123 334566677899999999999999999999999 888877777
Q ss_pred c-cCCCCCCCCCcEEEEcCCCCC-----CCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 279 I-NLRSRNIDGYDAIFLATHKFL-----GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 279 i-d~~~~~~~~~D~v~~S~hK~l-----ggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
+ +..++ |+|+++.++|||+ |||. .|++++++++ .+.+++...|++ ++..................|+
T Consensus 278 l~~pge~---GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r~~PgriVG~s-~d~~g~~~~~l~LqtReqhiRr 350 (993)
T PLN02414 278 LKPPGEW---GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KRLMPGRIIGVS-VDSSGKPALRMAMQTREQHIRR 350 (993)
T ss_pred CCCHhhc---cCcEEEECCCccccCCCCCCCC-eeEEEECHHH--HhhCCCcccCcc-cCCCCCcccccccccccchhhh
Confidence 7 46666 9999999999998 6666 7999999988 445554566653 2211000001122234556788
Q ss_pred cCCChhHHHHH--HHHHHHH---HHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCC
Q 043646 353 NGGTPQIVQMI--RAALAFW---VKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427 (625)
Q Consensus 353 ~~gt~~~~~~~--~aal~~~---~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~ 427 (625)
+.+|.|++... .++++.. .....|.+++.++++.++.++.++|... |+++..+. ...+++|.+. .
T Consensus 351 EkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~---~f~~vt~~~~--~---- 420 (993)
T PLN02414 351 DKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLP---FFDTVKVKCS--D---- 420 (993)
T ss_pred cccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCC---CcCeEEEecC--C----
Confidence 99999986542 2333322 2245899999999999999999999774 78876542 3456777652 1
Q ss_pred ccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 428 ~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
..++.+.|.+ .||.++.. ..+.+|+|+++++|++
T Consensus 421 ------------~~~v~~~L~~-~gI~l~~~---------------------------------~~~~lrvs~~e~~T~e 454 (993)
T PLN02414 421 ------------ADAIADAAAK-VGINLRVV---------------------------------DANTVTVSFDETTTLE 454 (993)
T ss_pred ------------HHHHHHHHHH-CCCeeEEe---------------------------------cCCeEEEEeeccCCHH
Confidence 4578888855 79987621 1267999999999999
Q ss_pred HHHHHHHHHHH
Q 043646 508 EFEFILAALEF 518 (625)
Q Consensus 508 did~ll~aL~~ 518 (625)
|||+|+++|..
T Consensus 455 dId~L~~~l~~ 465 (993)
T PLN02414 455 DVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHcc
Confidence 99999999974
No 70
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.93 E-value=3.4e-23 Score=235.33 Aligned_cols=365 Identities=15% Similarity=0.105 Sum_probs=241.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
.+.++.+++.++.+||++++|.+. .-++.++|+.+.+..++.+... ++ .-..+.+.+|+++...|.++
T Consensus 524 ~sqG~lq~i~elq~~l~eltGmd~--~Sl~p~aGA~gE~agL~aiR~y------~~----~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 524 QVEGYQELIAQLEKWLCSITGFDA--ISLQPNSGAQGEYAGLRVIRSY------HE----SRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred HhHHHHHHHHHHHHHHHHHHCCCC--cccCCchHHHHHHHHHHHHHHH------HH----hcCCCCCCEEEEEccccCcC
Confidence 456688999999999999999984 3466656666544333332210 00 00122345799999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC-HHHHHHHHHHcCCEEEEeccCc
Q 043646 195 LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD-TRSIARLLHQYGGFACFDFAAS 273 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~-l~~I~~la~~~g~~vivD~A~~ 273 (625)
..+++..|++++.|+.+.+|.+|+++|++++++ +++++++|++++++| +|.+.| +++|+++||++|.++++|+|+.
T Consensus 592 Pasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~--~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~ 668 (939)
T TIGR00461 592 PASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQ--HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANM 668 (939)
T ss_pred HHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhh--cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecCh
Confidence 988999999999999998999999999999983 224799999999999 799977 9999999999999999999997
Q ss_pred CCCcccc-CCCCCCCCCcEEEEcCCCCCCCC-----CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 274 GPYVKIN-LRSRNIDGYDAIFLATHKFLGGP-----GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 274 ~g~~~id-~~~~~~~~~D~v~~S~hK~lggp-----~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
.+...+. ..++ ++|++++|.||+|++| .|+|++.+++.+ .|..+|+........ ....
T Consensus 669 ~al~~l~~Pg~~---GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L------~~~lPg~~v~~t~d~---~gre---- 732 (939)
T TIGR00461 669 NAQVGLTSPGDL---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHL------IPFLPKHDVVSMITG---IGGS---- 732 (939)
T ss_pred hhCCCCCCcccc---CCCEEEecCCccCCCCCCCCCCCeEEEEEhhhc------hhhcCCCcccccccC---CCCc----
Confidence 7554443 3344 8999999999999845 446999999875 233344322110000 0000
Q ss_pred hhhhhcCC--ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCC-CCcceEEEEeccCCC
Q 043646 348 IEERENGG--TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSV-KRQAILSFLVYSTTN 424 (625)
Q Consensus 348 ~~~~~~~g--t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~-~~~~i~~f~~~~~~~ 424 (625)
...+.... +.+..-++++.+-+......|+.++.+....+++|+.++|.+ +++++.+... ....-+.|...+.
T Consensus 733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~-- 808 (939)
T TIGR00461 733 KSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPL-- 808 (939)
T ss_pred cccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccch--
Confidence 00010111 111111112211111224455667777888889999999987 4455543211 1111133333221
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
....++...++++.|.+ +|+...+-. + | -.+.+-|.+.-..
T Consensus 809 --------~~~~g~~~~dIakrL~d-~G~hapt~~-~--p---------------------------v~g~lmiepTE~e 849 (939)
T TIGR00461 809 --------KAKTGIEAIDVAKRLQD-YGFHAPTLS-F--P---------------------------VPGTLMVEPTESE 849 (939)
T ss_pred --------hhhcCCCHHHHHHHHHh-CCeeccccC-C--c---------------------------cCCeEEEEeeccC
Confidence 12345667899999977 799864311 1 1 1245666666688
Q ss_pred CHHHHHHHHHHHHHHHHhhhhcccCcccccccccccccccchh------hhhhh-hcccccCCc
Q 043646 505 SNEEFEFILAALEFIAAYGHRFLPLYHFNVKAGNWCSSQKAIK------DLIDK-ETNNNINNP 561 (625)
Q Consensus 505 t~edid~ll~aL~~~~~~~~~~~~~y~~~~~~~~w~~~~~~~~------~~~~~-~~~~~~~~~ 561 (625)
|.+|+|+++++|..+.++... ++.|.|.-.++.|| .+++. +|-..|+..
T Consensus 850 skeelD~f~~al~~I~~e~~~--------~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~ 905 (939)
T TIGR00461 850 SLEELDRFCDAMIAIKEEINA--------LVAGQPKGQDNPLKNAPHSLQSLITSEWWHPYSRE 905 (939)
T ss_pred CHHHHHHHHHHHHHHHHHHHH--------hhcCCCCCCcchHhhCCCCHHHhhcCCCCCCcChh
Confidence 999999999999999988655 78899988888877 34554 786555443
No 71
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.93 E-value=7.2e-24 Score=224.21 Aligned_cols=323 Identities=17% Similarity=0.150 Sum_probs=222.8
Q ss_pred CCCceEeccCCC-CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 043646 74 GKRRLTYADHTA-SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAA 152 (625)
Q Consensus 74 g~~~~~Yld~~~-~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaa 152 (625)
|...++.|..+. ..+.|+.+.+++.+++......+.. ...++|+.+++++|++++ +|+++ +|++++
T Consensus 17 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~~-~G~~~~ 83 (346)
T TIGR01141 17 GGKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDP-----------DPAELKQALADYYGVDPE-QILLG-NGSDEI 83 (346)
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----------CHHHHHHHHHHHhCcChH-HEEEc-CCHHHH
Confidence 334566775433 3456778999988765321111110 025799999999998766 89998 788988
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCC
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~ 232 (625)
+..++.++ +++||+ |+++.+.|+.+...++..|++++.++++.++.+|++++++++. +
T Consensus 84 l~~~~~~l---------------~~~gd~--v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-----~ 141 (346)
T TIGR01141 84 IELLIRAF---------------LEPGDA--VLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-----D 141 (346)
T ss_pred HHHHHHHh---------------cCCCCE--EEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-----C
Confidence 88887766 467875 8888888877766778889999999998888899999999875 5
Q ss_pred CCeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcCCCc---cccCCCCCCCCCcEEEEcCCCCCCCCC-Cc
Q 043646 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYV---KINLRSRNIDGYDAIFLATHKFLGGPG-TP 306 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~g~~---~id~~~~~~~~~D~v~~S~hK~lggp~-g~ 306 (625)
++++|++++++||||.+.|++++.++|+.+ |+++++|++++.-.. ..+.-.. ...++++.|++|++|.|+ ++
T Consensus 142 ~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~g~~G~r~ 219 (346)
T TIGR01141 142 KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAE--YPNLIVLRTLSKAFGLAGLRI 219 (346)
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhh--CCCEEEEehhhHhhhchhhhc
Confidence 799999999999999999999999999887 999999999762111 1111111 123466789999997553 48
Q ss_pred eEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 043646 307 GILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDV 386 (625)
Q Consensus 307 G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (625)
|++++++++. +.+.+... ..+.+.+.+ .++.+++. .....+.+.++.++
T Consensus 220 G~~~~~~~~~--~~~~~~~~--------------------------~~~~~~~~~--~~~~~~l~-~~~~~~~~~~~~~~ 268 (346)
T TIGR01141 220 GYAIANAEII--DALNKVRA--------------------------PFNLSRLAQ--AAAIAALR-DDDFIEKTVEEINA 268 (346)
T ss_pred eeeecCHHHH--HHHHhccC--------------------------CCCCCHHHH--HHHHHHhC-CHHHHHHHHHHHHH
Confidence 9999988762 22221110 011111211 22233331 11135677788888
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG 466 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~ 466 (625)
+++++.+.|.+++++++..+ .+.++.+.+ +. +..++.+.|.+ +||.+++|..+..
T Consensus 269 ~~~~l~~~L~~~~g~~~~~~----~g~~~~~~~-~~----------------~~~~~~~~L~~-~gI~v~~g~~f~~--- 323 (346)
T TIGR01141 269 ERERLYDGLKKLPGLEVYPS----DANFVLIRF-PR----------------DADALFEALLE-KGIIVRDLNSYPG--- 323 (346)
T ss_pred HHHHHHHHHHhcCCCEECCC----cCCEEEEec-CC----------------CHHHHHHHHHH-CCeEEEeCCCcCC---
Confidence 89999999988888886533 234444433 21 25678888865 7999998876531
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
.++++|||++ +++|+++++++|+
T Consensus 324 -------------------------~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 324 -------------------------LPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred -------------------------CCCeEEEecC---CHHHHHHHHHHhC
Confidence 1488999987 8999999999874
No 72
>PLN02483 serine palmitoyltransferase
Probab=99.93 E-value=1.3e-23 Score=230.59 Aligned_cols=339 Identities=17% Similarity=0.119 Sum_probs=225.0
Q ss_pred eccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHH
Q 043646 80 YADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQE 158 (625)
Q Consensus 80 Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~ 158 (625)
||..+.. ..+++.+.+++.++- . +++.+....+.....+++++.+|+++|.+ + .++|+ +|..+++..+ .
T Consensus 110 YLgl~~~~~~~~~~~~~ai~~~g----~--~~~~sr~~~g~~~~~~ele~~lA~~~g~~-~-ai~~~-~G~~an~~~i-~ 179 (489)
T PLN02483 110 YLGFAAADEYCTPRVIESLKKYS----A--STCSSRVDGGTTKLHRELEELVARFVGKP-A-AIVFG-MGYATNSTII-P 179 (489)
T ss_pred ccCcCCCCHHHHHHHHHHHHHhC----C--CCCccccccCCcHHHHHHHHHHHHHhCCC-c-EEEEC-CHHHHHHHHH-H
Confidence 4554432 234456666665532 1 11122222345677889999999999964 3 68886 7877766433 3
Q ss_pred HhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh--CCC---
Q 043646 159 VMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA--AKR--- 233 (625)
Q Consensus 159 ~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~--~~~--- 233 (625)
++ +++||. |+++..+|+++...++..|++++.++.+ |+++|++.+++... .++
T Consensus 180 al---------------~~~Gd~--Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~ 237 (489)
T PLN02483 180 AL---------------IGKGGL--IISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHR 237 (489)
T ss_pred Hh---------------CCCCCE--EEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhcccccccc
Confidence 34 478885 9999999999999999999999999864 67777777653110 122
Q ss_pred --Ce-EEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc------cCCCCCCCCCcEEEEcCCCCCCCCC
Q 043646 234 --PM-LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI------NLRSRNIDGYDAIFLATHKFLGGPG 304 (625)
Q Consensus 234 --~~-lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i------d~~~~~~~~~D~v~~S~hK~lggp~ 304 (625)
.+ +|++.++.|++|.+.++++|.++|++||+++++|+||+.++... +.......++|+++.|++|.||+ .
T Consensus 238 p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~ 316 (489)
T PLN02483 238 PWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-C 316 (489)
T ss_pred CCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-C
Confidence 24 67777788999999999999999999999999999998765321 11111123679999999999984 4
Q ss_pred CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh-cCCChhHHHHHHHHHHHHHHhh--cCHHHHH
Q 043646 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE-NGGTPQIVQMIRAALAFWVKEY--IGYEVIK 381 (625)
Q Consensus 305 g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~~aal~~~~~~~--~g~~~i~ 381 (625)
| |+++.++++. +.+.....+ ..+ ....|...+.+.++++++..+. .-.....
T Consensus 317 G-G~i~~~~~li--~~l~~~~~~----------------------~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~ 371 (489)
T PLN02483 317 G-GYIAGSKELI--QYLKRTCPA----------------------HLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKL 371 (489)
T ss_pred c-eEEEcCHHHH--HHHHHhCcc----------------------ccccCCcCHHHHHHHHHHHHHHHhCccccchHHHH
Confidence 4 8998888773 222111100 000 0123344444455666653221 1123345
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCC
Q 043646 382 KQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCAC 461 (625)
Q Consensus 382 ~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~ 461 (625)
++.+++++++++.|.++ |+.++++. ..+++.+.+.... ...++++.|.+ .||.+.+..++
T Consensus 372 ~~l~~~~~~l~~~L~~~-G~~v~~~~---~sp~~~l~l~~~~---------------~~~~~~~~Ll~-~GI~v~~~~fp 431 (489)
T PLN02483 372 AQIRENSNFFRSELQKM-GFEVLGDN---DSPVMPIMLYNPA---------------KIPAFSRECLK-QNVAVVVVGFP 431 (489)
T ss_pred HHHHHHHHHHHHHHHHC-CCcccCCC---CCCEEEEEECCHH---------------HHHHHHHHHHH-CCcEEeeeCCC
Confidence 67888899999999887 77777653 3466666554321 13467788866 69999864443
Q ss_pred CchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 462 AGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+.|. ..+.+||+++..+|++|+++++++|+++++.
T Consensus 432 ~~p~--------------------------~~~~vRi~isa~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 432 ATPL--------------------------LLARARICISASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred CCCC--------------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 3221 1378999999999999999999999998764
No 73
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=3.2e-23 Score=220.10 Aligned_cols=321 Identities=15% Similarity=0.022 Sum_probs=212.5
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+... ++|+.+++++.+.+..... |.. ....++|+.++++++++++ +|++| +|+++++..
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~------y~~-----~~~~~lr~~ia~~~~~~~~-~i~it-~Ga~~~l~~ 87 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDCAER------YPD-----VEYRHLHQALARHHQVPAS-WILAG-NGETESIFA 87 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHhccc------CcC-----ccHHHHHHHHHHHhCcChh-hEEEC-CCHHHHHHH
Confidence 45677655433 5677889998776642211 111 1146799999999999877 89998 899999998
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhCCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~~~ 233 (625)
++.++ .+|+ +++..+.|..+...++..|++++.++++++ ..+| +++.+.+. ++
T Consensus 88 ~~~~l----------------~~g~---viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-----~~ 142 (356)
T PRK08056 88 VVSGL----------------KPRR---AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-----PD 142 (356)
T ss_pred HHHHh----------------CCCC---EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-----CC
Confidence 87765 4554 444556677776778888999999998753 2444 34555554 57
Q ss_pred CeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----cccc-CCCCCCCCCcEEEEcCCCCCCCCC-
Q 043646 234 PMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKIN-LRSRNIDGYDAIFLATHKFLGGPG- 304 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id-~~~~~~~~~D~v~~S~hK~lggp~- 304 (625)
+++|++++|+||||.+.+ +++|+++|+++|+++|+|+++.--. ..++ +... ..++++.|++|+||.|+
T Consensus 143 ~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~---~~~i~~~S~SK~~~~~G~ 219 (356)
T PRK08056 143 LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADN---PHLWVLRSLTKFYAIPGL 219 (356)
T ss_pred CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccC---CCEEEEEechhhccCcch
Confidence 899999999999999988 7889999999999999999953211 0111 2221 34688899999998564
Q ss_pred CceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHH
Q 043646 305 TPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQ 383 (625)
Q Consensus 305 g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~ 383 (625)
.+|++++++ .+ +..+.. .....+.+..+ +.+...++........++++
T Consensus 220 RiG~~v~~~~~~--~~~l~~---------------------------~~~~~~~~~~~--~~~a~~~l~~~~~~~~~~~~ 268 (356)
T PRK08056 220 RLGYLVNSDDAA--VARMRR---------------------------QQMPWSINAFA--ALAGEVILQDRAYQQATWQW 268 (356)
T ss_pred hheeeecCCHHH--HHHHHH---------------------------hCCCCchhHHH--HHHHHHHhCCHHHHHHHHHH
Confidence 489998853 33 111110 00111222222 22222222122223455666
Q ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 384 EDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
.++.++++.+.|+.++++.+..+ .+.+.|...+. +..++++.|.+ +||.+++|..+.+
T Consensus 269 ~~~~r~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~----------------~~~~~~~~l~~-~gI~v~~~~~f~~ 326 (356)
T PRK08056 269 LAEEGARFYQALCALPLLTVWPG-----RANYLFLRCER----------------PDIDLQRALLT-QRILIRSCANYPG 326 (356)
T ss_pred HHHHHHHHHHHHhcCCCcEEcCC-----CCcEEEEEcCC----------------ChHHHHHHHHH-CCeEEEECCCCCC
Confidence 77778889999988888776533 23443433321 13578888865 7999998876531
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
..++++||+++ +.++.++++++|++++.
T Consensus 327 ---------------------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 327 ---------------------------LDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred ---------------------------CCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 12479999997 88999999999998754
No 74
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=1.4e-23 Score=222.48 Aligned_cols=321 Identities=14% Similarity=0.038 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS 201 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (625)
...++++.+++++|.+ +++++++| +.++..++.++. +.+||+ |+++..+|+++..++...
T Consensus 19 ~~~~~~~~la~~~~~~---~~~~~~sg-t~al~~~l~~l~--------------~~~gd~--vl~~~~~~~~~~~~~~~~ 78 (352)
T cd00616 19 KVREFEKAFAEYLGVK---YAVAVSSG-TAALHLALRALG--------------IGPGDE--VIVPSFTFVATANAILLL 78 (352)
T ss_pred HHHHHHHHHHHHhCCC---eEEEECCH-HHHHHHHHHHcC--------------CCCCCE--EEeCCcchHHHHHHHHHc
Confidence 4677899999999963 57777555 446777777652 467875 999999999999999999
Q ss_pred CCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc
Q 043646 202 LAEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN 280 (625)
Q Consensus 202 G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id 280 (625)
|++++.+++++ ++.+|+++|+++++ +++++|++++ ++|...|+++|.++|+++|+++++|++|+.|....+
T Consensus 79 g~~~~~~~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~ 150 (352)
T cd00616 79 GATPVFVDIDPDTYNIDPELIEAAIT-----PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKG 150 (352)
T ss_pred CCeEEEEecCCCcCCcCHHHHHHhcC-----cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECC
Confidence 99999999987 67899999999886 5789888764 689999999999999999999999999998876432
Q ss_pred CCCCCCCCCcEEEEcCC--CCCCCCCCceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCCh
Q 043646 281 LRSRNIDGYDAIFLATH--KFLGGPGTPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTP 357 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~h--K~lggp~g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~ 357 (625)
. ..+ ...|+.++|+| |+++++.| |++++++ ++ .+.+++...++....+ .. +......+..+++
T Consensus 151 ~-~~~-~~~d~~~~S~~~~K~~~~~~g-g~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~ 216 (352)
T cd00616 151 R-KVG-TFGDAGAFSFHPTKNLTTGEG-GAVVTNDEEL--AERARLLRNHGRDRDR--------FK-YEHEILGYNYRLS 216 (352)
T ss_pred E-Ecc-cCcceeEEcCCCCCCCcccCc-eEEEECCHHH--HHHHHHHHHcCCCCCC--------Cc-cccceeeeccCcC
Confidence 1 111 12477787765 99965554 7777764 44 2222222212111000 00 0000011122333
Q ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCC--CCcceEEEEeccCCCCCCccccccCC
Q 043646 358 QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSV--KRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 358 ~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~--~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
++... +... ...+.+.+.++.+++++++++.|.++++++++.+... ...++++|.+...
T Consensus 217 ~~~aa----~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------- 277 (352)
T cd00616 217 EIQAA----IGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE------------- 277 (352)
T ss_pred HHHHH----HHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc-------------
Confidence 33322 2222 2234577888889999999999999999998875421 2345666666321
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh------c-CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL------A-FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l------~-~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
.+.+..++.+.|.+ .||.++. +|......... . -+.+.+..+ ..+.+||++++++|++|
T Consensus 278 ~~~~~~~v~~~L~~-~gI~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~-----------~~~~l~l~~~~~~t~~d 343 (352)
T cd00616 278 AGESRDELIEALKE-AGIETRV--HYPPLHHQPPYKKLLGYPPGDLPNAEDL-----------AERVLSLPLHPSLTEEE 343 (352)
T ss_pred CCCCHHHHHHHHHH-CCCCeee--ecCccccCHhhhhccCCCcCCChHHHHH-----------HhCeEEccCCCCCCHHH
Confidence 12356789999954 6997654 34321110000 0 000111111 24799999999999999
Q ss_pred HHHHHHHHH
Q 043646 509 FEFILAALE 517 (625)
Q Consensus 509 id~ll~aL~ 517 (625)
|++++++|+
T Consensus 344 i~~i~~~l~ 352 (352)
T cd00616 344 IDRVIEALR 352 (352)
T ss_pred HHHHHHHhC
Confidence 999999874
No 75
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=4.9e-23 Score=221.17 Aligned_cols=341 Identities=11% Similarity=0.038 Sum_probs=217.2
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAGTTAA 152 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sGttaa 152 (625)
+..++|+.+... ++|+.+.+++.+.+... . . .|....+..++.+.+.+++.+..| ++++ +|++| +|++++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---~-~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~it-~G~~~a 104 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAG---H-T-RYTAARGLPALREAIAGFYAQRYGVDVDPE-RILVT-PGGSGA 104 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcC---C-C-ccCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEc-cCcHHH
Confidence 467899988877 56889999998877421 1 1 121122223334444444443334 4454 89998 899999
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhh
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKA 230 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~ 230 (625)
|..++.++ +++||+ |+++.++|+.+...++..|++++.++++.+ +.+|+++++++++
T Consensus 105 l~~~~~~~---------------~~~gd~--vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---- 163 (387)
T PRK08960 105 LLLASSLL---------------VDPGKH--WLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN---- 163 (387)
T ss_pred HHHHHHHh---------------cCCCCE--EEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC----
Confidence 99998877 578886 999999999999888889999999998764 4789999999887
Q ss_pred CCCCeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCCccccCCC-CCCCCCcEEEEcCCCCCCCCC-C
Q 043646 231 AKRPMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVKINLRS-RNIDGYDAIFLATHKFLGGPG-T 305 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~~~id~~~-~~~~~~D~v~~S~hK~lggp~-g 305 (625)
++++++++++++||||.+.+. ++|+++|++||+++++|+++..-...-+... .....-.+++.|++|.+|.|+ .
T Consensus 164 -~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlR 242 (387)
T PRK08960 164 -ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWR 242 (387)
T ss_pred -ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccE
Confidence 578899999999999999885 5677789999999999999642111100101 111122356779999998554 3
Q ss_pred ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh--cCHHHHHHH
Q 043646 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY--IGYEVIKKQ 383 (625)
Q Consensus 306 ~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~--~g~~~i~~~ 383 (625)
+|++++++++. +.+... ......+++.+.+.+ +..++ .+. .-.+..++.
T Consensus 243 iG~~~~~~~~~--~~~~~~------------------------~~~~~~~~s~~~q~a--~~~~l-~~~~~~~l~~~~~~ 293 (387)
T PRK08960 243 LGWLVAPPAAV--PELEKL------------------------AQNLYISASTPAQHA--ALACF-EPETLAILEARRAE 293 (387)
T ss_pred EEEEEcCHHHH--HHHHHH------------------------HhhhccCCCHHHHHH--HHHHh-hcCcHHHHHHHHHH
Confidence 89999988762 222110 011112223333221 22222 111 112344445
Q ss_pred HHHHHHHHHHhhCCCCcEEEe-CCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC
Q 043646 384 EDVYIESALGRILPNQNIQVL-GNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA 462 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~-~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~ 462 (625)
..+.++.+.+.|++. ++.+. .+ .++.+.|.-.+.. ..+..++++.|.+++||.+++|..|+
T Consensus 294 ~~~~~~~l~~~L~~~-~~~~~~~p----~g~~f~~~~~~~~-------------~~~~~~~~~~ll~~~gi~v~pg~~f~ 355 (387)
T PRK08960 294 FARRRDFLLPALREL-GFGIAVEP----QGAFYLYADISAF-------------GGDAFAFCRHFLETEHVAFTPGLDFG 355 (387)
T ss_pred HHHHHHHHHHHHHhc-CCcCCcCC----CeeEEEEEecccc-------------CCCHHHHHHHHHHhCCEEEcCchHhC
Confidence 555677788888775 44432 22 2345544443321 12356788777667899999987764
Q ss_pred chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 463 GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.+ + .++++||+++. +.+.+...++.|++++
T Consensus 356 ~~--~------------------------~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 356 RH--Q------------------------AGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred CC--C------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 21 0 14799999984 5566666666665543
No 76
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.2e-23 Score=221.39 Aligned_cols=325 Identities=15% Similarity=0.071 Sum_probs=223.6
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
+..++|+.+... ++|+.+++++.+.+... ... .|.. . -..++|+.+++++|.+.+++|++| +|+++++.
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~Y~~-~----~~~~lr~~ia~~~~~~~~~~I~~t-~G~~~~i~ 95 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEV---ALN-RYPD-P----RAAALKAALRAAMGVPAGADVLLG-NGSDELIQ 95 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhcc---ccc-cCCC-C----CHHHHHHHHHHHhCcCCCCcEEEc-CCHHHHHH
Confidence 468889877665 56789999998776320 000 1111 0 135688999999998754478887 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.+..++ +++||+ |+++.+.|..+...++..|++++.+++++++.+|+++|++++.. .++
T Consensus 96 ~~~~~~---------------~~~gd~--vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~----~~~ 154 (356)
T PRK04870 96 LLALAC---------------AKPGAT--VLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE----HRP 154 (356)
T ss_pred HHHHHh---------------cCCCCE--EEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----CCC
Confidence 988876 478886 99999999988888888999999999987788999999999873 478
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC-cc-c-cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY-VK-I-NLRSRNIDGYDAIFLATHKFLGGPG-TPGILL 310 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~-~~-i-d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~ 310 (625)
+++++++++||||.+.+.+++.++++..++++++|+++..-. .. . .+... .-.+++.|++| ++.|+ .+|+++
T Consensus 155 ~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~vi~~~S~SK-~~~~GlRiG~~i 230 (356)
T PRK04870 155 ALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARF---PNLLVMRTVSK-LGLAGLRLGYLA 230 (356)
T ss_pred CEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhC---CCEEEEecchh-hhhHHHhhhhhh
Confidence 999999999999999999998888887789999999964211 11 0 11111 22467789999 66454 389999
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
.++++. +.+...... .+...+.+.+ ....+.+....+...++.+..+++
T Consensus 231 ~~~~~i--~~~~~~~~~--------------------------~~~~~~~q~~---a~~~l~~~~~~~~~~~~~~~~~~~ 279 (356)
T PRK04870 231 GHPAWI--AELDKVRPP--------------------------YNVNVLTQAT---ALFALEHVDVLDAQAAQLRAERTR 279 (356)
T ss_pred CCHHHH--HHHHHccCC--------------------------CcCCHHHHHH---HHHHHhCHHHHHHHHHHHHHHHHH
Confidence 887762 222111100 0111122211 111211211245566677778888
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
+.+.|+.++++.+..+ . +.+.+...+ +..++.+.| .++||.+++|..+..
T Consensus 280 l~~~L~~~~~~~~~~~----~-~~~~~~~~~-----------------~~~~~~~~l-~~~gI~v~~~~~f~~------- 329 (356)
T PRK04870 280 LAAALAALPGVTVFPS----A-ANFILVRVP-----------------DAAAVFDGL-KTRGVLVKNLSGMHP------- 329 (356)
T ss_pred HHHHHHhCCCcEECCC----C-CeEEEEECC-----------------CHHHHHHHH-HHCCEEEEECCCCCC-------
Confidence 9999988888876432 2 333333332 145677777 558999998765421
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..++++||+++ +.+++++|+++|+++
T Consensus 330 --------------------~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 330 --------------------LLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred --------------------CCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 02489999998 899999999999875
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.7e-23 Score=222.48 Aligned_cols=321 Identities=16% Similarity=0.099 Sum_probs=217.0
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+... .+++.+.+++.+.+......|. ....+++++++++++++++ +|++| +|+++++..
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~-----------~g~~~lr~~ia~~~~~~~~-~i~~t-~G~~~~l~~ 96 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDELALYPD-----------GYAPELRTKVAKHLGVDEE-QLLFG-AGLDEVIQM 96 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCC-----------CcHHHHHHHHHHHhCCCHH-HEEEC-CCHHHHHHH
Confidence 34555433222 2456788888776532111111 1246688999999998776 89998 899999998
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
++.++ +++||. |+++.++|+.+...+...|++++.+|++ ++.+|+++++++++ ++++
T Consensus 97 ~~~~~---------------~~~gd~--v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-----~~~~ 153 (359)
T PRK03158 97 ISRAL---------------LNPGTN--TVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-----EQTK 153 (359)
T ss_pred HHHHH---------------hCCCCE--EEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-----CCCC
Confidence 88776 478885 9999999998877788889999999987 56789999998876 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHH--cCCEEEEeccCcCCCc----cccCCCCCCCCCcEEEEcCCCCCCCCC-CceE
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYV----KINLRSRNIDGYDAIFLATHKFLGGPG-TPGI 308 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~--~g~~vivD~A~~~g~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (625)
++++++|+||||.+.+.++|.++++. +|+++++|++++.... +..+.........+++.|++|.||.|+ .+|+
T Consensus 154 ~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~ 233 (359)
T PRK03158 154 IVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGY 233 (359)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhheh
Confidence 99999999999999999999999987 5999999999753221 111110011133577789999998554 3799
Q ss_pred EEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 309 LLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 309 l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
+++++++. +.+.... ...+++.+.+. ++.+++ .+....+.+.+..+..+
T Consensus 234 ~v~~~~~~--~~~~~~~--------------------------~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~~~~~~~ 282 (359)
T PRK03158 234 GIASEELI--EKLNIAR--------------------------PPFNTTRIAQY--AAIAAL-EDQAFLKECVEKNAEGL 282 (359)
T ss_pred hcCCHHHH--HHHHHhc--------------------------CCCCCCHHHHH--HHHHHh-cCHHHHHHHHHHHHHHH
Confidence 99887762 2221100 00122222221 112222 12222344555566667
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
+++.+.|.+. ++.++.+. +.+.+...+ .+..++.+.|.+ +||.+++|..|+
T Consensus 283 ~~~~~~l~~~-~~~~~~~~-----g~~i~~~~~----------------~~~~~~~~~l~~-~gv~v~~g~~f~------ 333 (359)
T PRK03158 283 EQYYAFCKEY-GLFYYPSQ-----TNFIFVDTG----------------RDANELFEALLK-KGYIVRSGAALG------ 333 (359)
T ss_pred HHHHHHHHHC-CCeeCCCc-----CcEEEEECC----------------CCHHHHHHHHHH-CCeEEeeCCCCC------
Confidence 7788888776 66665331 334443322 135678888865 799999987663
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.++++||+++ +.+|+++++++|+++
T Consensus 334 -----------------------~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 334 -----------------------FPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred -----------------------CCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 1489999998 899999999999875
No 78
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=2.4e-23 Score=225.21 Aligned_cols=344 Identities=17% Similarity=0.135 Sum_probs=221.7
Q ss_pred CceEeccCCCCCc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASGR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
+.+.|..+...+. .++.+.+++.+.+..+..+.+. +..-+.......++++.|++++|.+ + .++|+ +|++++..
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~--s~~~~~~~~~~~~Le~~la~~~g~~-~-~i~~~-sG~~a~~~ 121 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGG--TRNISGTSHPHVLLERELADLHGKE-S-ALLFT-SGYVSNDA 121 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCch--hhhcccChHHHHHHHHHHHHHhCCC-C-EEEEC-cHHHHHHH
Confidence 3456666555555 4678999998887654322221 1111123334678999999999963 3 57775 89876444
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.+. .+. .+.+|+ +|+++..+|.++..+++..|++++.++.+ |.+++++.+.+. ..+++
T Consensus 122 ~i~-~l~-------------~~~~g~--~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~-~~~~t 179 (410)
T PRK13392 122 ALS-TLG-------------KLLPGC--VILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASV-DPDRP 179 (410)
T ss_pred HHH-HHh-------------cCCCCC--EEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhc-cCCCC
Confidence 332 221 123666 48888889999988888889998877643 566777777531 12478
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc---CCC--CCCCCCcEEEEcCCCCCCCCCCceEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN---LRS--RNIDGYDAIFLATHKFLGGPGTPGIL 309 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id---~~~--~~~~~~D~v~~S~hK~lggp~g~G~l 309 (625)
++|++++++||||.+.|+++|.++|++||+++++|+||+.|..... +.. ...+.+|+++.+++|+||.++ |++
T Consensus 180 ~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~ 257 (410)
T PRK13392 180 KLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYI 257 (410)
T ss_pred EEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc--chh
Confidence 9999999999999999999999999999999999999986543111 100 011357888899999998765 777
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH-HHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI-VQMIRAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
+.++++.. .+.....+ ..+..+.++. ...+.++++.. +.. ....++.+.++
T Consensus 258 ~~~~~~~~--~l~~~~~~----------------------~~~s~~~~~~~~~a~~aaL~~~--~~~--~~~~~~~~~~~ 309 (410)
T PRK13392 258 AASADLID--FVRSFAPG----------------------FIFTTALPPAVAAGATAAIRHL--KTS--QTERDAHQDRV 309 (410)
T ss_pred hcCHHHHH--HHHHhCcc----------------------hhccCcCCHHHHHHHHHHHHHH--hcC--HHHHHHHHHHH
Confidence 77776622 11110000 0011122222 22233455543 222 23345667778
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
+++.+.|.++ |+++..+ ..+++.+.+... ....++++.|.+++||.++++.....+.
T Consensus 310 ~~l~~~L~~~-g~~~~~~----~~~~~~i~~~~~---------------~~~~~~~~~L~~~~GI~v~~~~~p~~~~--- 366 (410)
T PRK13392 310 AALKAKLNAN-GIPVMPS----PSHIVPVMVGDP---------------TLCKAISDRLMSEHGIYIQPINYPTVPR--- 366 (410)
T ss_pred HHHHHHHHHc-CCCCCCC----CCCEEEEEeCCH---------------HHHHHHHHHHHHhCCEEEeeeCCCCCCC---
Confidence 8899999876 6665533 345543333210 1135788888666899998754332111
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..+++||+++.++|++|+++++++|+++.++
T Consensus 367 -----------------------~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 367 -----------------------GTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred -----------------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999988665
No 79
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4.6e-23 Score=220.87 Aligned_cols=339 Identities=12% Similarity=0.041 Sum_probs=223.5
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+... ++++.+.+++.+.+.....+ .|. ...-..++|+++++++|.+++ +|++| +|+++++..
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~----~y~----~~~g~~~lr~~ia~~l~~~~~-~v~~~-~g~t~al~~ 98 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC----KYP----PPEGFPELRELILKDLGLDDD-EALIT-AGATESLYL 98 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC----CCC----CCcchHHHHHHHHHhcCCCCC-cEEEe-CCHHHHHHH
Confidence 57778765443 45678888888877431111 111 112256789999999999876 89998 788899999
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC---CCCCCHHHHHHHHHHhhhCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD---NGLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~---~~~ld~~~L~~~l~~~~~~~ 232 (625)
++.++ +.+||+ |+++.+.|......+...|++++.++++. ++.+|+++++++++ +
T Consensus 99 ~~~~~---------------~~~gd~--vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-----~ 156 (380)
T PRK06225 99 VMRAF---------------LSPGDN--AVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-----E 156 (380)
T ss_pred HHHHh---------------cCCCCE--EEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-----C
Confidence 88876 467775 88888888877767788899999999743 35799999999887 5
Q ss_pred CCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcC---CCccccCCCCCCCCCcEEEEcCCCCCCCCC-C
Q 043646 233 RPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG---PYVKINLRSRNIDGYDAIFLATHKFLGGPG-T 305 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~---g~~~id~~~~~~~~~D~v~~S~hK~lggp~-g 305 (625)
+++++++++++||||.+.+ +++|+++|+++|+++++|+++.. +.... .... ....+++.|++|++|.|+ .
T Consensus 157 ~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~~~-~~~~i~~~s~SK~~g~~G~R 233 (380)
T PRK06225 157 NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLA--AEYA-PEHTVTSYSFSKIFGMAGLR 233 (380)
T ss_pred CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCch--hhcC-CCCEEEEeechhhcCCccce
Confidence 7899999999999999865 88899999999999999998531 11111 1110 133566779999997443 3
Q ss_pred ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHH
Q 043646 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQED 385 (625)
Q Consensus 306 ~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (625)
+|++++++++. +.+.+.. ....+...+.+.+ +...+.....-.+.+.+..+
T Consensus 234 iG~i~~~~~l~--~~~~~~~-------------------------~~~~~~~~~~~~~--a~~~l~~~~~~~~~~~~~~~ 284 (380)
T PRK06225 234 IGAVVATPDLI--EVVKSIV-------------------------INDLGTNVIAQEA--AIAGLKVKDEWIDRIRRTTF 284 (380)
T ss_pred eEEEecCHHHH--HHHHHHH-------------------------hcccCCCHHHHHH--HHHHHhcchHHHHHHHHHHH
Confidence 79999988773 2221110 0011222222221 11111101111344555555
Q ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh
Q 043646 386 VYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY 465 (625)
Q Consensus 386 ~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~ 465 (625)
.+.+.+.+.|++++++.+.... ..+.+.+..++.. +++..++++.|. ++||.+++|..|....
T Consensus 285 ~~~~~l~~~L~~~~~~~~~~~~---~~g~~~~~~~~~~-------------~~~~~~l~~~l~-~~gi~v~~g~~~~~~~ 347 (380)
T PRK06225 285 KNQKLIKEAVDEIEGVFLPVYP---SHGNMMVIDISEA-------------GIDPEDLVEYLL-ERKIFVRQGTYTSKRF 347 (380)
T ss_pred HHHHHHHHHHHhCcCCccccCC---CCCeEEEEEcccc-------------cCCHHHHHHHHH-HCCEEEcCCcccCcCC
Confidence 6677777888877665432111 1233333333221 245678888886 5799999987664211
Q ss_pred hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 466 GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 466 ~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
.++++|+|++. +++++++++++|++++++.+
T Consensus 348 --------------------------~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 348 --------------------------GDRYIRVSFSI--PREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred --------------------------CCceEEEEeCC--CHHHHHHHHHHHHHHHHHhh
Confidence 24799999873 78999999999999987654
No 80
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=4.5e-23 Score=219.46 Aligned_cols=323 Identities=14% Similarity=0.070 Sum_probs=215.0
Q ss_pred ceEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
.++.|+.+.. -.+++.+.+++.+.+......+.. ...++++.+++++|++++ +++++++|+++++..
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEP-----------DAPELREALSKYTGVPVE-NIIVGGDGMDEVIDT 102 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------CHHHHHHHHHHHhCCCHH-HEEEeCCCHHHHHHH
Confidence 5777865532 234567788877665432222211 126789999999999876 788855899999988
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
++.++ +++||+ |+++.+.|+.+...++..|++++.++.+.++.+|+++++++++ ++++
T Consensus 103 ~~~~~---------------~~~gd~--vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~ 160 (361)
T PRK00950 103 LMRTF---------------IDPGDE--VIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-----EKTK 160 (361)
T ss_pred HHHHh---------------cCCCCE--EEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-----cCCC
Confidence 87776 468885 8888888887777788889999999977777899999999886 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEec
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISK 313 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~ 313 (625)
++++++++||||.+.|.++|.++|+++|+++++|+++.... ..+...+ .....-+++.|++|.+|.|+ .+|++++++
T Consensus 161 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~ 239 (361)
T PRK00950 161 VIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE 239 (361)
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH
Confidence 99999999999999999999999999999999999976322 1111111 00012356679999998665 479998887
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALG 393 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~ 393 (625)
++.. .+.... . ..+.+.+.+ .++..++ .+....++..++.+.+++++.+
T Consensus 240 ~~~~--~~~~~~------------------------~--~~~~~~~~~--~~a~~~l-~~~~~~~~~~~~~~~~r~~l~~ 288 (361)
T PRK00950 240 WLID--YYMRAK------------------------T--PFSLTRLSQ--AAAIAAL-SDKEYIEKSIEHGIKSREYLYN 288 (361)
T ss_pred HHHH--HHHHhc------------------------C--CCCCCHHHH--HHHHHHh-cCHHHHHHHHHHHHHHHHHHHh
Confidence 7621 111000 0 001111111 1222222 1211234555666666677776
Q ss_pred hhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCC
Q 043646 394 RILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFD 473 (625)
Q Consensus 394 ~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~ 473 (625)
.|. +.+..+ .+.++.+.+ +. .+..++++.|.+ +||.+++|..+..
T Consensus 289 ~l~----~~~~~~----~~~~i~~~~-~~---------------~~~~~~~~~l~~-~gv~v~~~~~f~~---------- 333 (361)
T PRK00950 289 ELP----FKVYPS----EANFVLVDV-TP---------------MTAKEFCEELLK-RGVIVRDCTSFRG---------- 333 (361)
T ss_pred hcC----eeECCC----cceEEEEEC-CC---------------CCHHHHHHHHHH-CCEEEeeCCccCC----------
Confidence 665 444322 223333323 21 346788988865 7999998764420
Q ss_pred hhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 474 QTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 474 ~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
..++++|||++ +.+|+++++++|++++
T Consensus 334 -----------------~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 334 -----------------LGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred -----------------CCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 12579999998 7899999999999864
No 81
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.92 E-value=1.1e-22 Score=218.07 Aligned_cols=338 Identities=15% Similarity=0.131 Sum_probs=219.1
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal 153 (625)
..+.|..+... .+++.+.+++.+.+... ..+ .|....+..++.+.+.+++++.+|.+ ++++|++| +|++++|
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t-~G~~~~l 104 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAENP--ENH--RYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSL-IGSKEGI 104 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCC--CCC--CCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEEC-CCcHHHH
Confidence 44555544433 34667888887765321 001 12111223455666666666666663 33257887 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAA 231 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~ 231 (625)
..++..+ +++||. |+++.+.|+.+...++..|++++.+|++.+ ..+|++++++++.
T Consensus 105 ~~~~~~~---------------~~~gd~--vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~----- 162 (383)
T TIGR03540 105 AHIPLAF---------------VNPGDI--VLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA----- 162 (383)
T ss_pred HHHHHHh---------------CCCCCE--EEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-----
Confidence 9998877 578885 999999999988888889999999999753 3579999998886
Q ss_pred CCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcC----CCccccCCCCC-CCCCcEEEEcCCCCCCCC
Q 043646 232 KRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVKINLRSRN-IDGYDAIFLATHKFLGGP 303 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~----g~~~id~~~~~-~~~~D~v~~S~hK~lggp 303 (625)
+++++|++++|+||||.+.+ +++|+++|++||+++++|++++. +.....+..+. .....+++.|++|.||.|
T Consensus 163 ~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~ 242 (383)
T TIGR03540 163 KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMT 242 (383)
T ss_pred ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCc
Confidence 57999999999999999988 68889999999999999999752 21223332221 012346678999999755
Q ss_pred C-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHH
Q 043646 304 G-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKK 382 (625)
Q Consensus 304 ~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~ 382 (625)
+ .+|+++.++++. +.+... ......+++...+. ++..++.......+.+++
T Consensus 243 GlRiG~~i~~~~l~--~~~~~~------------------------~~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~ 294 (383)
T TIGR03540 243 GWRIGMAVGNADLI--AGLGKV------------------------KTNVDSGVFQAIQY--AAIAALNGPQDVVKEIRK 294 (383)
T ss_pred cceeeEEeCCHHHH--HHHHHH------------------------HHhcccCCChHHHH--HHHHHHhCCHHHHHHHHH
Confidence 4 389999887762 221100 00111222222222 222222111112345566
Q ss_pred HHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC
Q 043646 383 QEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA 462 (625)
Q Consensus 383 ~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~ 462 (625)
+.+..++.+.+.|.+. ++.++.+. ++.+.+...++ .++..++++.|.+++||.+++|..|.
T Consensus 295 ~~~~~~~~~~~~L~~~-~~~~~~~~----~~~~~~~~l~~--------------~~~~~~~~~~ll~~~gi~v~~g~~f~ 355 (383)
T TIGR03540 295 IYQRRRDLLLEALKKI-GIDVEKPK----ATFYVWVPVPE--------------GYTSAEFAARLLEETGVVVTPGVGFG 355 (383)
T ss_pred HHHHHHHHHHHHHHhC-CCEecCCC----cceEEEEECCC--------------CCCHHHHHHHHHHHCCEEEecchhhC
Confidence 6677788888999887 77776553 34444444332 23466788887667899999988764
Q ss_pred chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 463 GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
.. .++++||+++ .++++++..++.|+
T Consensus 356 ~~---------------------------~~~~~Ris~~--~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 356 EY---------------------------GEGYIRISLT--VPDERLEEAVARIK 381 (383)
T ss_pred cc---------------------------CCCeEEEEec--CCHHHHHHHHHHHh
Confidence 11 2479999997 35677666666654
No 82
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5e-23 Score=221.41 Aligned_cols=328 Identities=15% Similarity=0.131 Sum_probs=219.1
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
+++.+.+++.+.+..... .|....+..++.+.+.+++.+.+| .+++ +|++| +|+++++..++.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~-----~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~al~~~~~~l------ 113 (391)
T PRK08361 47 TPKNIKEAAKRALDEGWT-----HYTPNAGIPELREAIAEYYKKFYGVDVDVD-NVIVT-AGAYEATYLAFESL------ 113 (391)
T ss_pred CCHHHHHHHHHHHhcCCC-----CCCCCCCcHHHHHHHHHHHHHHhCCCCCcc-cEEEe-CChHHHHHHHHHHh------
Confidence 356777877765532110 111112234444555555554445 4444 89998 78888898888776
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
+++|+. |+++.++|......+...|++++.++++.+ +.+|+++++++++ ++++++++++++|
T Consensus 114 ---------~~~g~~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-----~~~~~v~i~~p~N 177 (391)
T PRK08361 114 ---------LEEGDE--VIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-----KRTRMIVINYPNN 177 (391)
T ss_pred ---------cCCCCE--EEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-----cccEEEEEeCCCC
Confidence 478885 999999999988888888999999998763 4799999999887 5789999999999
Q ss_pred ccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEecccc
Q 043646 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALY 316 (625)
Q Consensus 245 ~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~ 316 (625)
|||.+.| +++|+++|+++++++++|++++... ....+.... ...++++.|++|.+|.|+ .+|++++++++.
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~ 256 (391)
T PRK08361 178 PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAMTGWRLGFVIAPEQVI 256 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCCcHhhhhhhccCHHHH
Confidence 9999999 7889999999999999999965321 111111111 134678899999998563 289999987762
Q ss_pred ccCCCCCcccCCceEEeeccccccccccccchhhhh-cCCChhHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHH
Q 043646 317 QLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE-NGGTPQIVQMIRAALAFWVKEYI---GYEVIKKQEDVYIESAL 392 (625)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~~aal~~~~~~~~---g~~~i~~~~~~l~~~l~ 392 (625)
..+... ... ..+.+.+.+. ++..++ .+.. ..+.++++.++.++.+.
T Consensus 257 --~~~~~~-------------------------~~~~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~ 306 (391)
T PRK08361 257 --KDMIKL-------------------------HAYIIGNVASFVQI--AGIEAL-RSKESWKAVEEMRKEYNERRKLVL 306 (391)
T ss_pred --HHHHHH-------------------------HhhhccCCChHHHH--HHHHHh-cCCcccHHHHHHHHHHHHHHHHHH
Confidence 211000 000 1122222221 222222 1211 24566777777888899
Q ss_pred HhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 393 GRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
+.|++++++++..+. ++.+.+...+. .+++..++++.|.+++||.+++|..|...
T Consensus 307 ~~L~~~~~~~~~~p~----g~~~~~~~l~~-------------~~~~~~~l~~~l~~~~gv~v~pg~~f~~~-------- 361 (391)
T PRK08361 307 KRLKEMPHIKVFEPK----GAFYVFANIDE-------------TGMSSEDFAEWLLEKARVVVIPGTAFGKA-------- 361 (391)
T ss_pred HHHHhCCCCeecCCC----EEEEEEEECCC-------------CCCCHHHHHHHHHHhCCEEEcCchhhCCC--------
Confidence 999888888876653 34444444332 12346678888876789999988765311
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++||+++. ++++++..++.|++++++
T Consensus 362 -------------------~~~~iRi~~~~--~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 362 -------------------GEGYIRISYAT--SKEKLIEAMERMEKALEE 390 (391)
T ss_pred -------------------CCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 24899999983 678888888888877643
No 83
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.1e-22 Score=219.20 Aligned_cols=337 Identities=10% Similarity=0.058 Sum_probs=219.3
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal 153 (625)
..+.|+.+... ++++.+.+++.+.+... ....|. ..+..++.+.+.+++.+..|. +++++|++| +|++++|
T Consensus 33 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~----~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it-~G~~~al 106 (399)
T PRK07681 33 KMIDLSIGNPDMPPADFVREEMVHTANQK----ESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLL-MGSQDGL 106 (399)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcc----ccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEC-CCcHHHH
Confidence 34555444332 34667888887765321 110111 112344455555555555454 442478888 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAA 231 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~ 231 (625)
..++.++ +++||+ |+++.+.|+.+...++..|++++.++++++ ..+|++++++++.
T Consensus 107 ~~~~~~~---------------~~~Gd~--Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~----- 164 (399)
T PRK07681 107 VHLPMVY---------------ANPGDI--ILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA----- 164 (399)
T ss_pred HHHHHHh---------------CCCCCE--EEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-----
Confidence 9998877 578886 999999999998888889999999999754 3679999998886
Q ss_pred CCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCCCCCC
Q 043646 232 KRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKFLGGP 303 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~lggp 303 (625)
+++++|++++|+||||.+.+ +++|+++|++||+++|+|++++.-. ....+.... .....+++.|++|.+|.|
T Consensus 165 ~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (399)
T PRK07681 165 DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLA 244 (399)
T ss_pred ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 57999999999999999988 6778889999999999999976221 111221111 012346777999999755
Q ss_pred C-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-hcCHHHHH
Q 043646 304 G-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE-YIGYEVIK 381 (625)
Q Consensus 304 ~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~-~~g~~~i~ 381 (625)
+ .+|+++.++++. +.+.... .....+.+.+.+. ++..++ .+ ....+..+
T Consensus 245 GlRiG~~i~~~~l~--~~~~~~~------------------------~~~~~~~s~~~q~--~~~~~l-~~~~~~~~~~~ 295 (399)
T PRK07681 245 GSRIGYMIGNEEIV--RALTQFK------------------------SNTDYGVFLPIQK--AACAAL-RNGAAFCEKNR 295 (399)
T ss_pred cceeEEEecCHHHH--HHHHHHH------------------------hhcccCCCHHHHH--HHHHHH-hCcHHHHHHHH
Confidence 4 389999887762 2211000 0001122222221 122222 11 11233445
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCC
Q 043646 382 KQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCAC 461 (625)
Q Consensus 382 ~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~ 461 (625)
++.+..++++.+.|.+. ++++..+ .++.+.|...++ .++..++++.|.+++||.+++|..|
T Consensus 296 ~~~~~~~~~l~~~L~~~-g~~~~~p----~~g~f~~~~l~~--------------~~~~~~~~~~l~~~~gv~v~pg~~f 356 (399)
T PRK07681 296 GIYQERRDTLVDGFRTF-GWNVDKP----AGSMFVWAEIPK--------------GWTSLSFAYALMDRANVVVTPGHAF 356 (399)
T ss_pred HHHHHHHHHHHHHHHHC-CCcccCC----CeeeEEEEECCC--------------CCCHHHHHHHHHHhCCEEEeCChhh
Confidence 55666677888888876 6766544 235555555442 2345678888877789999998766
Q ss_pred CchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 462 AGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
..+ .++++||+++ .++++++.+++.|++
T Consensus 357 ~~~---------------------------~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 357 GPH---------------------------GEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CcC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 411 2489999998 468999999999987
No 84
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=8.8e-23 Score=221.38 Aligned_cols=348 Identities=16% Similarity=0.139 Sum_probs=220.6
Q ss_pred ceEeccCCCCCcchHHHHHHHHHhhCCCC--CCCCCCcchhhHHHHHHHHH-HHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASGRSLRYIEDYIINNVLPFY--GNTHTSDSYVGQRMTKMVHE-ASNYIKRCLGGGQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~~~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~~~~~~~~-~~~~ia~~~g~~~~~~vift~sGttaal 153 (625)
..+.|..+. .+.|+.|.+++...+...+ ++++.. +..+....+..++ +++.+++++|++.. .|+++ +|+. ++
T Consensus 26 ~~~~l~~~~-n~~~~~v~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~la~~~g~~~~-~i~~~-sgt~-al 100 (416)
T PRK00011 26 EHIELIASE-NFVSPAVMEAQGSVLTNKYAEGYPGKR-YYGGCEYVDVVEQLAIDRAKELFGAEYA-NVQPH-SGSQ-AN 100 (416)
T ss_pred cCeeeeccc-CcCCHHHHHHHhchhhcccccCCCCcc-ccccchHHHHHHHHHHHHHHHHhCCCce-eeecC-CchH-HH
Confidence 345555444 3478899999877764333 344332 2233334444544 78899999999765 56665 6765 56
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH-----HHcCCeEEEEecCC-CCCCCHHHHHHHHHH
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-----RQSLAEVVEIGLDD-NGLLDIEALRSQLEL 227 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-----~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~ 227 (625)
..++.++ +++||+ |+++.++|.++...+ ...|++++.++++. ++.+|+++|++++++
T Consensus 101 ~~~l~~l---------------~~~gd~--Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~ 163 (416)
T PRK00011 101 AAVYFAL---------------LKPGDT--ILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE 163 (416)
T ss_pred HHHHHHh---------------cCCCCE--EEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh
Confidence 6676666 578886 999999987653221 23467888888874 578999999999974
Q ss_pred hhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCce
Q 043646 228 YKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPG 307 (625)
Q Consensus 228 ~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G 307 (625)
.++++|++++. .+|...|+++|+++|+++|+++++|+||+.|............++|++++|+||+++||.| |
T Consensus 164 ----~~~k~v~~~~~--~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~g-g 236 (416)
T PRK00011 164 ----HKPKLIIAGAS--AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRG-G 236 (416)
T ss_pred ----cCCCEEEECCC--cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCc-e
Confidence 37888888643 4577789999999999999999999999876542211111112579999999999987886 7
Q ss_pred EEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHH
Q 043646 308 ILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQE 384 (625)
Q Consensus 308 ~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~ 384 (625)
+++.++ ++. +.+..... ....+++......+ +++... ...+.+.+.++.
T Consensus 237 ~i~~~~~~~~--~~l~~~~~------------------------~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~ 288 (416)
T PRK00011 237 LILTNDEELA--KKINSAVF------------------------PGIQGGPLMHVIAAKAVAFKEA--LEPEFKEYAQQV 288 (416)
T ss_pred EEEeCCHHHH--HHHHHHhC------------------------ccccCCccHHHHHHHHHHHHHH--HhhhHHHHHHHH
Confidence 888754 542 11111000 00112222222222 222221 123567778888
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 385 DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
+++++++++.|.++ |+++... .....++.+.+.+. .++...+.+.|. +.||.++.+...-..
T Consensus 289 ~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~i~~~~~--------------~~~~~~~~~~L~-~~GI~v~~~~~p~~~ 350 (416)
T PRK00011 289 VKNAKALAEALAER-GFRVVSG--GTDNHLVLVDLRSK--------------GLTGKEAEAALE-EANITVNKNAVPFDP 350 (416)
T ss_pred HHHHHHHHHHHHhC-CCeeeec--CCCCeEEEEeCccc--------------CCCHHHHHHHHH-HcCcEEccCcCCCCC
Confidence 99999999999886 7777631 11233444433211 234567888784 579999754321100
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCC----CCCHHHHHHHHHHHHHHHHh
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPY----YMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~----~~t~edid~ll~aL~~~~~~ 522 (625)
... ..++.+|++... .++++|+++++++|++++..
T Consensus 351 -~~~----------------------~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 351 -RSP----------------------FVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred -CCC----------------------CCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 000 013568996532 46799999999999987664
No 85
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=1.2e-22 Score=219.37 Aligned_cols=342 Identities=16% Similarity=0.126 Sum_probs=222.2
Q ss_pred eEeccCCCCCcc-hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 043646 78 LTYADHTASGRS-LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRL 156 (625)
Q Consensus 78 ~~Yld~~~~~~~-p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l 156 (625)
+.+..+...+.. ++.|.+++.+++..+..+++. +...........++++.+++++|.+ . .+++ ++|+.++...+
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~g~~~~~~~Le~~la~~~g~~-~-~l~~-~sG~~an~~ai 122 (402)
T TIGR01821 48 TVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGG--TRNISGTNIPHVELEAELADLHGKE-S-ALVF-TSGYVANDATL 122 (402)
T ss_pred EEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcc--hhhhhCCcHHHHHHHHHHHHHhCCC-e-EEEE-CchHHHHHHHH
Confidence 344445555543 457999998888665333321 2112223556788999999999963 2 4555 48877744443
Q ss_pred HHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeE
Q 043646 157 QEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPML 236 (625)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~l 236 (625)
..+.. ..+++ +|+....+|.+...+++..|+++..++. .|++++++.++.. ..+++++
T Consensus 123 ~~l~~--------------~~~~~--~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~-~~~~~~~ 180 (402)
T TIGR01821 123 ATLAK--------------IIPGC--VIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSV-DPNRPKI 180 (402)
T ss_pred HHhhC--------------CCCCC--EEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhc-cCCCCeE
Confidence 22221 12444 4777778999998889888988776653 3788888888631 1136899
Q ss_pred EEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc---cC-CCCC-CCCCcEEEEcCCCCCCCCCCceEEEE
Q 043646 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI---NL-RSRN-IDGYDAIFLATHKFLGGPGTPGILLI 311 (625)
Q Consensus 237 v~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i---d~-~~~~-~~~~D~v~~S~hK~lggp~g~G~l~v 311 (625)
|++++++|++|.+.|+++|.++|++||+++++|+||+.|.... .. ...+ .+.+|++..+++|.||+++ |+++.
T Consensus 181 v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~ 258 (402)
T TIGR01821 181 IAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAA 258 (402)
T ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC--ceeec
Confidence 9999999999999999999999999999999999998664211 10 1111 1246888889999998655 77777
Q ss_pred eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChh-HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 312 SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ-IVQMIRAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~-~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
++++.. .+.....+ ..+..+.++ ....+.++++.+ +.. +.+.++.+.++++
T Consensus 259 ~~~~~~--~l~~~~~~----------------------~~~t~~~~~~~~aaa~aaL~~~--~~~--~~~~~~~~~~~~~ 310 (402)
T TIGR01821 259 SRKLID--AIRSYAPG----------------------FIFTTSLPPAIAAGATASIRHL--KES--QDLRRAHQENVKR 310 (402)
T ss_pred CHHHHH--HHHHhCcC----------------------ceecCcCCHHHHHHHHHHHHHh--hcC--HHHHHHHHHHHHH
Confidence 777622 11100000 001112222 233334555554 222 4555666778999
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
+.+.|+++ ++.++.+ .++++.+.+... ....++.+.|.+++||.+++...++.+.
T Consensus 311 l~~~L~~~-g~~~~~~----~~~i~~i~~~~~---------------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~----- 365 (402)
T TIGR01821 311 LKNLLEAL-GIPVIPN----PSHIVPVIIGDA---------------ALCKKVSDLLLNKHGIYVQPINYPTVPR----- 365 (402)
T ss_pred HHHHHHHc-CCCcCCC----CCCEEEEEeCCH---------------HHHHHHHHHHHhcCCEEEEeECCCCCCC-----
Confidence 99999876 6665543 345655543210 0134688887666799998754433221
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
...++||+++.++|++|+++++++|++++++
T Consensus 366 ---------------------g~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 366 ---------------------GTERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred ---------------------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999998765
No 86
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=2e-22 Score=213.53 Aligned_cols=324 Identities=14% Similarity=0.071 Sum_probs=218.3
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRL 156 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l 156 (625)
..-|+.+... ++|+.+.+++.+.+... ....|. . ....++|+.++++++++++ +|++| +|++++|..+
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~----~~~~y~-~----~~~~~lr~~ia~~~~~~~~-~i~it-~G~~~~l~~~ 92 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSS----QVNIYP-D----PTAEKLREELARYCSVVPT-NIFVG-NGSDEIIHLI 92 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcC----cccCCC-C----ccHHHHHHHHHHHhCCCcc-cEEEe-cCHHHHHHHH
Confidence 3556655554 46788999987766321 111111 1 1136789999999999876 89998 8999999998
Q ss_pred HHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeE
Q 043646 157 QEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPML 236 (625)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~l 236 (625)
+.++ +++||+ |+++.+.|..+...++..|++++.+++++++.+|+++++++++. .++++
T Consensus 93 ~~~l---------------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----~~~k~ 151 (351)
T PRK14807 93 MLAF---------------INKGDV--VIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK----YQPKL 151 (351)
T ss_pred HHHh---------------cCCCCE--EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc----cCCCE
Confidence 8876 578886 88888888877777788899999999987778999999999873 37999
Q ss_pred EEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCC-CCCCCCcEEEEcCCCCCCCCC-CceEEEEecc
Q 043646 237 GSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRS-RNIDGYDAIFLATHKFLGGPG-TPGILLISKA 314 (625)
Q Consensus 237 v~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~-~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~ 314 (625)
+++++++||||.+.+.+++.+++++++.++++|+++..-+ .-.... .....-.+++.|++|.+|.|+ .+|+++.+++
T Consensus 152 v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~ 230 (351)
T PRK14807 152 VFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANEN 230 (351)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHH
Confidence 9999999999999999999999999889999999974211 100100 111122477789999998554 4899998877
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
+.. .+.... . ....+.+.+. ++..++ +....++..++.+..++++.+.
T Consensus 231 ~~~--~~~~~~------------------------~--~~~~~~~~q~--~~~~~l--~~~~~~~~~~~~~~~r~~l~~~ 278 (351)
T PRK14807 231 ILK--YLNLVK------------------------S--PYNINSLSQV--IALKVL--RTGVLKERVNYILNERERLIKE 278 (351)
T ss_pred HHH--HHHHcc------------------------C--CCCcCHHHHH--HHHHHH--hHHHHHHHHHHHHHHHHHHHHH
Confidence 622 111000 0 0111122221 222222 1122344445566667788888
Q ss_pred hCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCCh
Q 043646 395 ILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474 (625)
Q Consensus 395 L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~ 474 (625)
|.+++++.+..+ . +.+.+...+ +..++++.|.+ +||.++.+.... +
T Consensus 279 l~~~~g~~~~~~----~-~~~~~i~~~-----------------~~~~~~~~l~~-~gV~v~~~~~~~--------~--- 324 (351)
T PRK14807 279 LSKIPGIKVYPS----K-TNFILVKFK-----------------DADYVYQGLLE-RGILVRDFSKVE--------G--- 324 (351)
T ss_pred HHhCCCcEECcC----C-ccEEEEEcC-----------------CHHHHHHHHHH-CCEEEEECCCCC--------C---
Confidence 887788876432 2 333333322 14577888755 799998532110 0
Q ss_pred hhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 475 ~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.++++||+++ +.++.++++++|++++
T Consensus 325 -----------------~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 325 -----------------LEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred -----------------CCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 2478999997 7899999999998753
No 87
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.92 E-value=1.9e-22 Score=217.34 Aligned_cols=329 Identities=16% Similarity=0.105 Sum_probs=219.6
Q ss_pred chHHHHHHHHHhhCCC-CCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 89 SLRYIEDYIINNVLPF-YGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~-~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
.++.+.+++.+.+... +..+. +....+..++.+++++++++++|.+ + +|++| +|+++ +..++.++
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~---~~~~~G~~~l~~~l~~~la~~~g~~-~-~i~~t-sG~~a-~~~~~~~l------- 122 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMAS---VRFICGTQDLHKELEEKLAKFLGTE-D-AILYS-SCFDA-NGGLFETL------- 122 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCcc---cccccCCcHHHHHHHHHHHHHhCCC-c-EEEEc-ChHHH-HHHHHHHh-------
Confidence 5778888888877542 11111 1111234567889999999999975 3 67787 67554 44455554
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhh-hCCCCeEEEEecccCcc
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYK-AAKRPMLGSFSACSNVT 246 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~-~~~~~~lv~~~~~~n~T 246 (625)
+++||. |+++.++|+++...++..|++++.++. .|++++++++++.. ...++++|+..++.|++
T Consensus 123 --------~~~gd~--vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~ 187 (397)
T PRK06939 123 --------LGKEDA--IISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMD 187 (397)
T ss_pred --------CCCCCE--EEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCC
Confidence 578885 999999999998888888998887764 48899998886421 11378899999999999
Q ss_pred ccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc----CCCCC-CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCC
Q 043646 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN----LRSRN-IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSS 321 (625)
Q Consensus 247 G~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id----~~~~~-~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~ 321 (625)
|.+.++++|.++|++||+++++|++++.+....+ ..... ..++|+++.|+||+++++. .|++++++++. +.+
T Consensus 188 G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~G~v~~~~~~~--~~l 264 (397)
T PRK06939 188 GDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-GGYTAGRKEVI--DWL 264 (397)
T ss_pred CCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-ceEEEeCHHHH--HHH
Confidence 9999999999999999999999999976543221 11111 1257899999999997665 59999887763 222
Q ss_pred CCcccCCceEEeeccccccccccccchhhhhcCCC--hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC
Q 043646 322 PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT--PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ 399 (625)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 399 (625)
..... . . ...++ +.....+.+++++. +. .+.++++.+.+++++.+.|.++
T Consensus 265 ~~~~~---~-------------------~-~~~~~~~~~~~~a~~~al~~~--~~--~~~~~~~~~~~~~~l~~~L~~~- 316 (397)
T PRK06939 265 RQRSR---P-------------------Y-LFSNSLAPAIVAASIKVLELL--EE--SDELRDRLWENARYFREGMTAA- 316 (397)
T ss_pred HHhCc---c-------------------c-cccCCCCHHHHHHHHHHHHHH--hc--CHHHHHHHHHHHHHHHHHHHHc-
Confidence 11000 0 0 00112 22222223344443 21 2466778888899999999876
Q ss_pred cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHH
Q 043646 400 NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLE 479 (625)
Q Consensus 400 gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~ 479 (625)
++++..+ ..+++.+..... .+..++++.|.++ ||.+.++.++..+.
T Consensus 317 ~~~~~~~----~~~~~~~~~~~~---------------~~~~~~~~~L~~~-gI~v~~~~~~~~~~-------------- 362 (397)
T PRK06939 317 GFTLGPG----EHPIIPVMLGDA---------------KLAQEFADRLLEE-GVYVIGFSFPVVPK-------------- 362 (397)
T ss_pred CCCcCCC----CCCEEEEEECCH---------------HHHHHHHHHHHHC-CceEeeeCCCCCCC--------------
Confidence 5554432 234443332111 1245788888775 99998544321110
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 480 IRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 480 ~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
..+++|++++++++++|+++++++|++++++.
T Consensus 363 ------------~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 363 ------------GQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred ------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 13689999999999999999999999887653
No 88
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.92 E-value=1.7e-22 Score=216.86 Aligned_cols=337 Identities=15% Similarity=0.114 Sum_probs=215.7
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~ 154 (625)
.+.|+.+... ++++.+.+++.+.+... ... .|....+..++.+.+.+++.+.+|. ++++.|++| +|+++++.
T Consensus 33 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t-~G~~~~i~ 107 (385)
T PRK09276 33 VISLGIGDPDLPTPDHIIEAMCKAVEDP--ENH--QYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISL-IGSKEGIA 107 (385)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHhCC--CCC--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEc-cCcHHHHH
Confidence 4455544433 34667888887766421 011 1211112344555566666655565 343357877 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~~ 232 (625)
.++..+ +++||+ |+++.+.|+.+...++..|++++.++++.+ ..+|++++++++. +
T Consensus 108 ~~~~~~---------------~~~gd~--Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-----~ 165 (385)
T PRK09276 108 HIPLAF---------------VNPGDV--VLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-----K 165 (385)
T ss_pred HHHHHh---------------CCCCCE--EEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-----c
Confidence 998877 578886 999999999888888889999999998743 4589999988876 5
Q ss_pred CCeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCCCCCCC
Q 043646 233 RPMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKFLGGPG 304 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~lggp~ 304 (625)
++++|++++|+||||.+.+. ++|+++|++||+++++|+++.... ....+..+. ..+..+++.|++|.||.|+
T Consensus 166 ~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 245 (385)
T PRK09276 166 KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG 245 (385)
T ss_pred cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcc
Confidence 78999999999999999884 788889999999999999976321 112222221 0133567789999998554
Q ss_pred -CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHH
Q 043646 305 -TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQ 383 (625)
Q Consensus 305 -g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~ 383 (625)
.+|+++.++++. +.+.... .....+.+...+. ++..++.......+.++++
T Consensus 246 lRiG~~i~~~~l~--~~~~~~~------------------------~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~ 297 (385)
T PRK09276 246 WRIGFAVGNADLI--AGLGKVK------------------------SNVDSGVFQAIQE--AGIAALNGPQEVVEELRKI 297 (385)
T ss_pred hhheeeeCCHHHH--HHHHHHH------------------------hhccCCCCHHHHH--HHHHHHcCcHHHHHHHHHH
Confidence 389999887762 2221100 0001112212221 1222221111123455666
Q ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 384 EDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
.+..++++.+.|+++ +++++.+. ++.+.+...++ .++..++++.|.+++||.+++|..|..
T Consensus 298 ~~~~~~~l~~~L~~~-~~~~~~~~----~~~~~~v~~~~--------------~~~~~~l~~~ll~~~gi~v~~g~~f~~ 358 (385)
T PRK09276 298 YQERRDILVEGLRKL-GLEVEPPK----ATFYVWAPVPK--------------GYTSAEFATLLLDKAGVVVTPGNGFGE 358 (385)
T ss_pred HHHHHHHHHHHHHhC-CCcccCCC----cceEEEEECCC--------------CCCHHHHHHHHHHhCCEEECCchhhCC
Confidence 677788888999886 67766542 34444443332 234667888876668999999876641
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
+ .++++||+++ .+++++...++.|.
T Consensus 359 ~---------------------------~~~~~Ris~~--~~~~~l~~~l~~l~ 383 (385)
T PRK09276 359 Y---------------------------GEGYFRIALT--VPDERIEEAVERIK 383 (385)
T ss_pred C---------------------------CCCeEEEEeC--CCHHHHHHHHHHHh
Confidence 1 2479999997 36677666666654
No 89
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.3e-23 Score=201.58 Aligned_cols=404 Identities=16% Similarity=0.163 Sum_probs=292.2
Q ss_pred CCCCCCCCChHHHHHHHHHhhcCCC-ccc-----cCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchh
Q 043646 42 DHHPPHSKPSEEKLAWLRSQIIGND-VEF-----DYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYV 115 (625)
Q Consensus 42 ~~~~~~~~~~~~~~~~lr~~~~~~~-~~~-----~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~ 115 (625)
|+......+.++.++.+|..|.... ..+ .-..-..+.+||-.++.|.+|+.+.+.+.+.+..+..-. ...+..
T Consensus 26 d~~~Al~Ld~~d~l~~~Rd~F~iPk~~~lp~~d~sLv~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~a-v~gH~~ 104 (465)
T KOG3846|consen 26 DMEKALELDGSDYLESLRDEFNIPKFKSLPDADPSLVSDDKPVIYLCGNSLGLMPKSTRNSINAELDKWAKCA-VEGHFK 104 (465)
T ss_pred CHHHHhhcCcchhHHHHHHHhcCCccccCCCCCccccCCCCCeEEEeccccccCchhhHhHHHHHHHHHHhhh-hhcccc
Confidence 4444445667899999999886321 001 011123578999999999999999999988885432111 111112
Q ss_pred hHH-HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCC-CceEEEEcCC----
Q 043646 116 GQR-MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDE-ERWVVFLGPY---- 189 (625)
Q Consensus 116 ~~~-~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~---- 189 (625)
|.. +....+-+...++..+|+... +|.++ ++-|.+|+.++..|- +|. .+..|+...-
T Consensus 105 GkvPW~~~De~il~l~~~iVGA~e~-Evavm-NsLTvNlh~Ll~sFy---------------KPTekR~KILlE~kaFPS 167 (465)
T KOG3846|consen 105 GKVPWVSIDEPILPLLAPIVGAQEN-EVAVM-NSLTVNLHSLLISFY---------------KPTEKRFKILLEKKAFPS 167 (465)
T ss_pred cccceeecchhhhhhhhhhccCCch-hhhhH-hhhhhHHHHHHHHhc---------------CCcchhhhhhhccCCCCc
Confidence 221 223345567788999999877 78887 789999999988772 222 2334666544
Q ss_pred CCchhHHHHHHcCCeE----EEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCC
Q 043646 190 EHHSNLLSWRQSLAEV----VEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGG 264 (625)
Q Consensus 190 ~h~s~~~~~~~~G~~v----v~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~ 264 (625)
.|++....++..|..+ +.+...+ ...+..+++...|.. .++...+|+|+.++..||...++.+|...-+..|+
T Consensus 168 DhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEk--ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc 245 (465)
T KOG3846|consen 168 DHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEK--NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGC 245 (465)
T ss_pred hHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHh--cCCeEEEEEeecceeecccccchhhhhhcccCCCc
Confidence 4555555566677753 2333222 336777888888873 34568899999999999999999999966666899
Q ss_pred EEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCC-CCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccc
Q 043646 265 FACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFL-GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 265 ~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~l-ggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (625)
+|-+|-||++|.+++.++.| ++||.|++.+|++ .|++|+|.+++..+. .....|...||+......+|.++...
T Consensus 246 ~VGfDLAHAvgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHekh--~~~~~prl~GWwgh~~s~RF~Mdnvl 320 (465)
T KOG3846|consen 246 LVGFDLAHAVGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEKH--TKESLPRLAGWWGHDPSKRFQMDNVL 320 (465)
T ss_pred EechhhhhhhcCCceEEeec---CCceEEEeeecccccCCCccceeeeehhh--hcchhhHHhhhccCCcchhhhhcccc
Confidence 99999999999999999999 9999999999999 457889999999888 55677888999887777777776666
Q ss_pred cccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC-----------CcEEEeCCCC-C
Q 043646 344 YLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN-----------QNIQVLGNTS-V 409 (625)
Q Consensus 344 ~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l-----------~gv~v~~~~~-~ 409 (625)
.+.+...+|+...|++...+ +..++.+ .+..+++++.+...++.|+...++.. +-+.++.|.. .
T Consensus 321 ~lipGa~GfRiSNPpi~~v~al~~SLe~F--~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~ 398 (465)
T KOG3846|consen 321 ELIPGALGFRISNPPIIDVVALRSSLELF--AQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTD 398 (465)
T ss_pred ccCccccccccCCCcHhHHHHHHhhHHHH--HHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccc
Confidence 67777788888999988765 4556655 55668899999988888887776543 2356666654 4
Q ss_pred CCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCC
Q 043646 410 KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYL 489 (625)
Q Consensus 410 ~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~ 489 (625)
.|+..++.....+ ...+...|.+ +|+....
T Consensus 399 erGcQLsl~Fssp-----------------~~~vfqeL~k-rGv~~Dk-------------------------------- 428 (465)
T KOG3846|consen 399 ERGCQLSLYFSSP-----------------TPKVFQELHK-RGVIGDK-------------------------------- 428 (465)
T ss_pred cccceEEEEeCCC-----------------chHHHHHHHH-cCeeccc--------------------------------
Confidence 5666666665432 2367777754 5665431
Q ss_pred CCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhh
Q 043646 490 GVKPGWTRITF-PYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 490 g~~~g~iRis~-~~~~t~edid~ll~aL~~~~~~~ 523 (625)
..|+.||+++ +.|++..|+..++++|.+++...
T Consensus 429 -R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 429 -RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred -cCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 1578999997 89999999999999999987653
No 90
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=1.1e-22 Score=217.02 Aligned_cols=313 Identities=15% Similarity=0.049 Sum_probs=212.8
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
+++.+.+++.+.+......+.. ...++|+.+++++|++++ +|++| +|+++++..++.++
T Consensus 46 ~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~t-~G~~~~l~~~~~~l-------- 104 (367)
T PRK02731 46 PSPKAIEAIRAAADELHRYPDG-----------SGFELKAALAEKFGVDPE-RIILG-NGSDEILELLARAY-------- 104 (367)
T ss_pred CCHHHHHHHHHHHHhhcCCCCC-----------cHHHHHHHHHHHhCcCHH-HEEEc-CCHHHHHHHHHHHh--------
Confidence 3566888887765332212211 024689999999999766 89998 89999998888776
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccc
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGI 248 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~ 248 (625)
+++||. |+++.+.|..+...++..|++++.++.+ ++.+|+++++++++ +++++|++++++||||.
T Consensus 105 -------~~~gd~--vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~l~~~~~-----~~~~~v~l~~p~nptG~ 169 (367)
T PRK02731 105 -------LGPGDE--VIYSEHGFAVYPIAAQAVGAKPVEVPAK-DYGHDLDAMLAAVT-----PRTRLVFIANPNNPTGT 169 (367)
T ss_pred -------cCCCCE--EEEecCCHHHHHHHHHHcCCeEEEeccc-CCCCCHHHHHHHhC-----CCCcEEEEeCCCCCCCc
Confidence 467885 8888888877766677789999999984 46789999999886 57899999999999999
Q ss_pred ccCHHHHHHHHHHc--CCEEEEeccCcCCCc----cccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCC
Q 043646 249 YSDTRSIARLLHQY--GGFACFDFAASGPYV----KINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSS 321 (625)
Q Consensus 249 ~~~l~~I~~la~~~--g~~vivD~A~~~g~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~ 321 (625)
+.|.++|.++++.+ |+++++|+++..... ...+.......-.+++.|+.|.+|.|+ .+|++++++++. +.+
T Consensus 170 ~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~--~~l 247 (367)
T PRK02731 170 YLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEII--DAL 247 (367)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHH--HHH
Confidence 99999999999875 899999999653221 111110111122356678999987554 479999988762 222
Q ss_pred CCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE
Q 043646 322 PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI 401 (625)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv 401 (625)
.... ..+ +.+.+.+ .++.+++ ......+.+.++.+.+.+++.+.|.+. ++
T Consensus 248 ~~~~------------------------~~~--~~~~~~~--~~a~~~l-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 297 (367)
T PRK02731 248 NRVR------------------------QPF--NVNSLAL--AAAVAAL-DDDAFVEKSRALNAEGMAWLTEFLAEL-GL 297 (367)
T ss_pred HHcc------------------------CCC--CCCHHHH--HHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 1110 000 1111111 2223333 122235567777777888888988876 66
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHH
Q 043646 402 QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIR 481 (625)
Q Consensus 402 ~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~ 481 (625)
.+..+ .++++.+.+ +. ..+..++++.|.+ +||.++++..++
T Consensus 298 ~~~~~----~g~~~~i~~-~~--------------~~~~~~~~~~L~~-~gI~v~~~~~~~------------------- 338 (367)
T PRK02731 298 EYIPS----VGNFILVDF-DD--------------GKDAAEAYQALLK-RGVIVRPVAGYG------------------- 338 (367)
T ss_pred ccCCC----CceEEEEEC-CC--------------CCCHHHHHHHHHH-CCEEEEeCCCCC-------------------
Confidence 65422 234444433 21 1246788888865 799999875432
Q ss_pred HHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 482 SAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 482 ~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++||+++ +.+|+++++++|++++.
T Consensus 339 ----------~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 339 ----------LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred ----------CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 1478999997 78999999999998764
No 91
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1.1e-22 Score=219.72 Aligned_cols=342 Identities=16% Similarity=0.100 Sum_probs=226.0
Q ss_pred CceEeccCCCCCc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASGR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
+-+.|..+...+. ..+.|.+++.+++..+..+++. +...........++++.+++++|.+ ..++|+ +|++++..
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~-SG~~An~~ 120 (406)
T PRK13393 46 EVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGG--TRNISGTNHYHVLLEAELADLHGKE--AALLFT-SGYVSNWA 120 (406)
T ss_pred cEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcc--cccccCChHHHHHHHHHHHHHhCCC--cEEEeC-CcHHHHHH
Confidence 4467777878887 5678999999988765333321 1111123456788999999999963 245665 88876444
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.+ ..+. ...+++ +|++...+|.++..+++..|++++.++. .|++++++.+... ..+++
T Consensus 121 ai-~~l~-------------~~~~g~--~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~-~~~~~ 178 (406)
T PRK13393 121 AL-STLG-------------SRLPGC--VILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDL-DPHRP 178 (406)
T ss_pred HH-HHhh-------------cCCCCC--EEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhc-cCCCC
Confidence 33 3221 012555 5888889999999999988998887764 3788888877631 11367
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc-ccc--C-CCCC-CCCCcEEEEcCCCCCCCCCCceEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV-KIN--L-RSRN-IDGYDAIFLATHKFLGGPGTPGIL 309 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~-~id--~-~~~~-~~~~D~v~~S~hK~lggp~g~G~l 309 (625)
++|++++++|++|.+.|+++|.++|+++|+++++|++|+.|.. +.. + ...+ .+.+|+++.++.|.+|.++ |++
T Consensus 179 ~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~ 256 (406)
T PRK13393 179 KLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYI 256 (406)
T ss_pred EEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC--cee
Confidence 8999999999999999999999999999999999999986652 111 1 0000 1246888889999998655 777
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccchhhh--hcCCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEER--ENGGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDV 386 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~--~~~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (625)
+.++++.. .+... ... +..+. |.....+.++++.. +..+. .+++.++
T Consensus 257 ~~~~~~~~--~l~~~------------------------~~~~~~t~~~~p~~~aa~~aaL~~~--~~~~~--~~~~~~~ 306 (406)
T PRK13393 257 TGSAALCD--FIRSF------------------------ASGFIFTTSLPPAVAAGALASVRHL--KASSA--ERERHQD 306 (406)
T ss_pred eCCHHHHH--HHHHh------------------------CcCceecCccCHHHHHHHHHHHHHH--hhCHH--HHHHHHH
Confidence 77766521 11110 011 11112 22233344556654 22222 2345567
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG 466 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~ 466 (625)
+++++++.|.++ ++.++.+ .++++.+.+... .....+.+.|.+++||.++++...+.|.
T Consensus 307 ~~~~l~~~L~~~-g~~~~~~----~~~i~~v~~~~~---------------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~- 365 (406)
T PRK13393 307 RVARLRARLDKA-GIPHLPN----PSHIVPVMVGDP---------------VLCKQISDELLDRYGIYVQPINYPTVPR- 365 (406)
T ss_pred HHHHHHHHHHHc-CCCcCCC----CCCeEEEEeCCH---------------HHHHHHHHHHHHhCCEEEEeECCCCCCC-
Confidence 788899988775 5554432 345665543210 1135688888766799998765433221
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..+.+||+++.++|++|+++++++|++++.+
T Consensus 366 -------------------------g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 366 -------------------------GTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred -------------------------CCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 1367999999999999999999999998765
No 92
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=3.9e-22 Score=215.60 Aligned_cols=333 Identities=12% Similarity=0.032 Sum_probs=223.5
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
.|+.+.+++.+.+... .. .|....+..++.+.+.+++.+..|.+ ++++|++| +|+++++..++..+
T Consensus 68 ~~~~~~~~~~~~~~~~----~~-~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt-~G~~~al~~~~~~l------ 135 (413)
T PLN00175 68 GPDFVKEAAIQAIRDG----KN-QYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVT-SGCTEAIAATILGL------ 135 (413)
T ss_pred CCHHHHHHHHHHHhcC----CC-CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEe-CCHHHHHHHHHHHh------
Confidence 4677888887766431 11 12223345566677777777766753 33368888 78999998888776
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~ 245 (625)
+++||+ |++..+.|+.+...++..|++++.++++. ++.+|+++|++++. +++++|++++++||
T Consensus 136 ---------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-----~~~k~i~i~~p~NP 199 (413)
T PLN00175 136 ---------INPGDE--VILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-----SKTRAILINTPHNP 199 (413)
T ss_pred ---------CCCCCE--EEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-----cCceEEEecCCCCC
Confidence 578986 89899999998888899999999999975 56899999999987 57999999999999
Q ss_pred cccccC---HHHHHHHHHHcCCEEEEeccCcCCCc---cccCCCCC-CCCCcEEEEcCCCCCCCCC-CceEEEEeccccc
Q 043646 246 TGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---KINLRSRN-IDGYDAIFLATHKFLGGPG-TPGILLISKALYQ 317 (625)
Q Consensus 246 TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~---~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~ 317 (625)
||.+.+ +++|+++|++||+++++|+++..... ...+..+. .....+++.|++|.|+.|+ .+|++++++++.
T Consensus 200 tG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~- 278 (413)
T PLN00175 200 TGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLT- 278 (413)
T ss_pred CCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHH-
Confidence 999976 67789999999999999999653221 11222211 1133577789999998665 489999988772
Q ss_pred cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 318 LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
..+... ......+++.+.+.+ +..++.......+.++++.+..++.+.+.|.+
T Consensus 279 -~~l~~~------------------------~~~~~~~~s~~~Q~a--~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (413)
T PLN00175 279 -WGVRQA------------------------HSFLTFATATPMQWA--AVAALRAPESYYEELKRDYSAKKDILVEGLKE 331 (413)
T ss_pred -HHHHHH------------------------HhhccCCCCHHHHHH--HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 211000 000112333333322 22222111112455666777778888899987
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC-ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhh
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL-HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l-~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~ 476 (625)
. ++.+..+. ++.+.|...... ++ +..++++.|.+++||.+.+|..|.....
T Consensus 332 ~-g~~~~~p~----g~~f~~~~~~~~-------------~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~---------- 383 (413)
T PLN00175 332 V-GFKVYPSS----GTYFVMVDHTPF-------------GFENDIAFCEYLIEEVGVAAIPPSVFYLNPE---------- 383 (413)
T ss_pred C-CCeecCCC----eeEEEEEecccc-------------CCCCHHHHHHHHHHhCCEEEeCchHhCCCCC----------
Confidence 6 67766542 455544433211 12 2467888887778999998876531000
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 477 ~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
...+++||+++. ++++++..++.|+++++
T Consensus 384 --------------~~~~~iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 384 --------------DGKNLVRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred --------------CCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 024799999983 78999999999987754
No 93
>PRK09105 putative aminotransferase; Provisional
Probab=99.92 E-value=1.5e-22 Score=215.71 Aligned_cols=318 Identities=13% Similarity=0.089 Sum_probs=218.9
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
+..+|||.+... ++|+.+.+++.+.+... + .|.. . ...++|+.|++++|.+++ +|++| +|++.+|.
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~----~Y~~----~-~~~~Lr~aia~~~~v~~e-~I~it-~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALS--G----RYDL----E-LEDDLRTLFAAQEGLPAD-HVMAY-AGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHh--c----CCCC----c-hHHHHHHHHHHHhCcChh-hEEEc-CChHHHHH
Confidence 467899988765 45788899887765321 1 1211 1 156688899999999877 89998 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++.++ +++||+ |+++.++|+.+...++..|++++.++.+.++.+|++++++. . +++
T Consensus 110 ~~~~~l---------------~~~gd~--Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~-----~~~ 166 (370)
T PRK09105 110 YAVLAF---------------TSPTAG--LVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D-----PNA 166 (370)
T ss_pred HHHHHH---------------cCCCCE--EEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C-----CCC
Confidence 998887 478886 99999999999888889999999999987778999998765 2 468
Q ss_pred eEEEEecccCccccccCHHHHHHHHHH--cCCEEEEeccCcCC-Ccc--ccCCCCCCCCCc-EEEEcCCCCCCCCC-Cce
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGP-YVK--INLRSRNIDGYD-AIFLATHKFLGGPG-TPG 307 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~--~g~~vivD~A~~~g-~~~--id~~~~~~~~~D-~v~~S~hK~lggp~-g~G 307 (625)
+++++++|+||||.+.+.++|.++++. +|+++++|+++..- ..+ .++.. ...+ +++.|++|.+|.|+ .+|
T Consensus 167 ~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~---~~~~vi~~~SfSK~~g~~GlRiG 243 (370)
T PRK09105 167 GLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVA---QRKDLIVLRTFSKLYGMAGMRLG 243 (370)
T ss_pred CEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHh---hCCCEEEEecccHhhcCCcccee
Confidence 999999999999999999998888764 48999999996421 111 11111 1234 45569999998554 389
Q ss_pred EEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 043646 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVY 387 (625)
Q Consensus 308 ~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (625)
+++.++++. +.+.+. ....++.... .++.+.+. +....+...++....
T Consensus 244 ~~v~~~~~i--~~l~~~----------------------------~~~~~~~~~~-~aa~~~L~-~~~~~~~~~~~~~~~ 291 (370)
T PRK09105 244 LAAARPDLL--AKLARF----------------------------GHNPLPVPAA-AAGLASLR-DPKLVPQRRAENAAV 291 (370)
T ss_pred eeecCHHHH--HHHHhc----------------------------CCCCcCHHHH-HHHHHHHh-CHHHHHHHHHHHHHH
Confidence 999987762 222111 0011222221 22222221 222244556677777
Q ss_pred HHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhH
Q 043646 388 IESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGH 467 (625)
Q Consensus 388 ~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~ 467 (625)
++++.+.|.++ ++++..+. ++.+. ...+ .+..++++.|.+ +||.++.+ |. .
T Consensus 292 r~~l~~~L~~~-g~~~~~~~----~~f~~-~~~~----------------~~~~~l~~~L~~-~gI~v~~~--~~-~--- 342 (370)
T PRK09105 292 REDTIAWLKKK-GYKCTPSQ----ANCFM-VDVK----------------RPAKAVADAMAK-QGVFIGRS--WP-I--- 342 (370)
T ss_pred HHHHHHHHHHC-CCCcCCCC----CcEEE-EeCC----------------CCHHHHHHHHHH-CCcEEecC--CC-C---
Confidence 88888888876 66665442 33332 2111 135678888866 59998422 21 0
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.++++||+++ +++++++++++|+++.
T Consensus 343 ------------------------~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 343 ------------------------WPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ------------------------CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 1489999998 7899999999999875
No 94
>PRK07324 transaminase; Validated
Probab=99.92 E-value=9.1e-23 Score=217.77 Aligned_cols=297 Identities=13% Similarity=0.002 Sum_probs=202.7
Q ss_pred HHHHHHHHHHhC-CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC
Q 043646 124 HEASNYIKRCLG-GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 124 ~~~~~~ia~~~g-~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
.++|+.|+++++ .+++ +|++| +|+++++..++.++ +++||+ |+++.+.|.+....++..|
T Consensus 65 ~~lr~~ia~~~~~~~~~-~vi~t-~G~~~al~~~~~~l---------------~~~gd~--Vl~~~P~y~~~~~~~~~~g 125 (373)
T PRK07324 65 PEFKEAVASLYQNVKPE-NILQT-NGATGANFLVLYAL---------------VEPGDH--VISVYPTYQQLYDIPESLG 125 (373)
T ss_pred HHHHHHHHHHhcCCChh-hEEEc-CChHHHHHHHHHHh---------------CCCCCE--EEEcCCCchhHHHHHHHcC
Confidence 458888888875 4555 89998 78899899888876 578886 8888889988887888899
Q ss_pred CeEEEEecCCC--CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc
Q 043646 203 AEVVEIGLDDN--GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV 277 (625)
Q Consensus 203 ~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~ 277 (625)
++++.++++.+ ..+|+++++++++ ++++++++++++||||.+.+ +++|+++|++||+++++|++++.-..
T Consensus 126 ~~v~~v~~~~~~~~~~d~~~l~~~~~-----~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~ 200 (373)
T PRK07324 126 AEVDYWQLKEENGWLPDLDELRRLVR-----PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDE 200 (373)
T ss_pred CEEEEEecccccCCCCCHHHHHHhCC-----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccc
Confidence 99999998753 3589999988876 58999999999999999988 88899999999999999999653111
Q ss_pred cccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC
Q 043646 278 KINLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 278 ~id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
....... ....-.+++.|++|.+|.|+ .+|++++++++. ..+..... ....+
T Consensus 201 ~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li--~~~~~~~~------------------------~~~~~ 254 (373)
T PRK07324 201 DGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVI--DILRKYRD------------------------YTMIC 254 (373)
T ss_pred CCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHH--HHHHHHhC------------------------cEEec
Confidence 1111111 01122466779999998554 389999977662 22211100 00011
Q ss_pred ChhHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccC
Q 043646 356 TPQIVQMIRAALAFWVKE-YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIER 434 (625)
Q Consensus 356 t~~~~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~ 434 (625)
.+.+.+.++ ...+ .. ..-.+..++..+..++.+.+.|.+.+++.+..|. ++.+.|...+.
T Consensus 255 ~~~~~q~~a--~~~l-~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~----gg~~~~i~~~~------------ 315 (373)
T PRK07324 255 AGVFDDMLA--SLAL-EHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK----AVSTSFVKLDV------------ 315 (373)
T ss_pred CChHHHHHH--HHHH-cCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC----ceEEEEEEeCC------------
Confidence 222222211 1111 11 1112344455555677788888877777776653 34444444432
Q ss_pred CCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 043646 435 NKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILA 514 (625)
Q Consensus 435 ~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~ 514 (625)
.++..++++.|++++||.+++|..|. .++++|||++. +++.++..++
T Consensus 316 --~~~~~~~~~~ll~~~gv~v~pg~~F~-----------------------------~~~~iRis~~~--~~~~l~~~l~ 362 (373)
T PRK07324 316 --DMPSEDFCLKLLKETGVLLVPGNRFD-----------------------------LEGHVRIGYCC--DTETLKKGLK 362 (373)
T ss_pred --CCCHHHHHHHHHHhcCEEEECccccC-----------------------------CCCeEEEEecC--CHHHHHHHHH
Confidence 13466788887777899999987664 24799999973 6788888888
Q ss_pred HHHHHHHh
Q 043646 515 ALEFIAAY 522 (625)
Q Consensus 515 aL~~~~~~ 522 (625)
.|++++++
T Consensus 363 rl~~~l~~ 370 (373)
T PRK07324 363 KLSEFLRE 370 (373)
T ss_pred HHHHHHHh
Confidence 88887653
No 95
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4.5e-22 Score=214.22 Aligned_cols=333 Identities=15% Similarity=0.066 Sum_probs=218.6
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
+++.+.+++.+.+... .. .|....+...+.+.+.+++.+.+|. +++ ++++| +|+++++..++.++
T Consensus 45 ~~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~-~g~~~a~~~~~~~~------ 111 (393)
T PRK05764 45 TPEHIKEAAIEALDDG----KT-KYTPAAGIPELREAIAAKLKRDNGLDYDPS-QVIVT-TGAKQALYNAFMAL------ 111 (393)
T ss_pred CCHHHHHHHHHHHhcC----CC-CcCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEe-CCcHHHHHHHHHHh------
Confidence 3567888877766421 11 1211222344444555555444453 444 79998 78888898888776
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
+++||. |+++.+.|..+...++..|++++.++.+. +..+|++++++++. +++++|++++++|
T Consensus 112 ---------~~~gd~--vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~v~~~~p~N 175 (393)
T PRK05764 112 ---------LDPGDE--VIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-----PKTKALILNSPSN 175 (393)
T ss_pred ---------cCCCCE--EEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-----ccceEEEEECCCC
Confidence 467885 99999999998888888899999999874 34789999999886 5789999999999
Q ss_pred ccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc----cccCCCC--CCCCCcEEEEcCCCCCCCCC-CceEEEEecc
Q 043646 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----KINLRSR--NIDGYDAIFLATHKFLGGPG-TPGILLISKA 314 (625)
Q Consensus 245 ~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~~--~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~ 314 (625)
|||.+.+ +++|+++|++||+++++|++++.... ...+... ...+.++++.|++|.++.|+ .+|+++.+++
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~ 255 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKE 255 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHH
Confidence 9999976 77899999999999999999763221 0111111 11245788889999998564 3799998877
Q ss_pred ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 315 LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 315 ~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
+. +.+.... .....+++.+.+. ++..++.......+...++....++++.+.
T Consensus 256 ~~--~~~~~~~------------------------~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 307 (393)
T PRK05764 256 LI--KAMSKLQ------------------------SHSTSNPTSIAQY--AAVAALNGPQDEVEEMRQAFEERRDLMVDG 307 (393)
T ss_pred HH--HHHHHHH------------------------hhcccCCChHHHH--HHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence 62 2211100 0011122223221 112222101112345566666678888899
Q ss_pred hCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCCh
Q 043646 395 ILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474 (625)
Q Consensus 395 L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~ 474 (625)
|.+++++.+..+. ++.+.+...+... ...+.+..++.+.|.+++||.+++|..|..
T Consensus 308 L~~~~g~~~~~~~----g~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~----------- 363 (393)
T PRK05764 308 LNEIPGLECPKPE----GAFYVFPNVSKLL---------GKSITDSLEFAEALLEEAGVAVVPGIAFGA----------- 363 (393)
T ss_pred HhhCCCCcccCCC----cceEEEEeccccc---------ccccCCHHHHHHHHHHhCCEEEccccccCC-----------
Confidence 9888888876552 3444444433210 001123467888776778999998876641
Q ss_pred hhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 475 ~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
++++||+++. ++++++.++++|.+++.+
T Consensus 364 ------------------~~~vRis~~~--~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 364 ------------------PGYVRLSYAT--SLEDLEEGLERIERFLES 391 (393)
T ss_pred ------------------CCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 3899999973 799999999999988764
No 96
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.3e-22 Score=213.99 Aligned_cols=325 Identities=13% Similarity=0.037 Sum_probs=217.1
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
...++|+.+... .+|+.+.+++.+.. ..+ .|.. . ...++|++|++++|++++ +|++| +|+++++.
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~-----~~~--~Yp~-~----~~~~lr~~ia~~~~~~~~-~I~~t-~Ga~~~i~ 117 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMK-----FPY--VYPD-P----ESRRLRAALAEDSGLESE-NILVG-CGADELID 117 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhH-----hhc--cCCC-C----CHHHHHHHHHHHhCcChh-hEEEc-CCHHHHHH
Confidence 467888877543 45566888775421 111 0110 0 134699999999999876 89887 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++.++ +++||+ |+++.+.|+.+...++..|++++.++.+.++.+|+++|++++.. +++
T Consensus 118 ~~~~~~---------------~~~gd~--Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----~~~ 176 (380)
T PLN03026 118 LLMRCV---------------LDPGDK--IIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET----HKP 176 (380)
T ss_pred HHHHHh---------------cCCCCE--EEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc----cCC
Confidence 988876 578885 88888888877767778899999999877778999999998842 579
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc-CCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEe
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN-LRSRNIDGYDAIFLATHKFLGGPG-TPGILLIS 312 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id-~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~ 312 (625)
++|++++|+||||.+.+.+++.++++.. +++++|+++.--...-. ........-.+++.|++|.+|.|+ .+|+++.+
T Consensus 177 ~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~ 255 (380)
T PLN03026 177 KLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP 255 (380)
T ss_pred cEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC
Confidence 9999999999999999999999999865 99999999642110000 000101123477789999998454 48999988
Q ss_pred ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 043646 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~ 392 (625)
+++. +.+.... .....+.... .++.+.+ .+..-.+..+++.++.++++.
T Consensus 256 ~~~i--~~l~~~~---------------------------~~~~~~~~~q-~aa~~aL-~~~~~~~~~~~~~~~~r~~l~ 304 (380)
T PLN03026 256 LSII--EYLWRAK---------------------------QPYNVSVAAE-VAACAAL-SNPKYLEDVKNALVEERERLF 304 (380)
T ss_pred HHHH--HHHHHhc---------------------------CCCCCCHHHH-HHHHHHh-hCHHHHHHHHHHHHHHHHHHH
Confidence 7762 2211000 0011121111 1122222 121224455666777788888
Q ss_pred HhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 393 GRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
+.|++++++.+. +. .+.+.+...+. .++..++.+.|. ++||.++.+....
T Consensus 305 ~~L~~~~~~~~~-p~----~~~f~~~~~~~--------------~~~~~~~~~~l~-~~gI~v~~~~~~~---------- 354 (380)
T PLN03026 305 GLLKEVPFLEPY-PS----DANFILCRVTS--------------GRDAKKLKEDLA-KMGVMVRHYNSKE---------- 354 (380)
T ss_pred HHHHHCCCCeEC-CC----CCeEEEEECCC--------------CCCHHHHHHHHH-HCCeEEEECCCCC----------
Confidence 999887656553 22 24444443331 134567888886 5799998653211
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.++++|||++ +.+++++++++|+.+
T Consensus 355 -------------------~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 355 -------------------LKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred -------------------CCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 2479999998 789999999999864
No 97
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.91 E-value=6.8e-22 Score=219.68 Aligned_cols=341 Identities=13% Similarity=0.020 Sum_probs=216.1
Q ss_pred CceEeccCCCC----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh------CCCCCCcEEEe
Q 043646 76 RRLTYADHTAS----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL------GGGQADAIIFC 145 (625)
Q Consensus 76 ~~~~Yld~~~~----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~------g~~~~~~vift 145 (625)
+.++.|+.+.. .+.|+.+.+++.+.+..... |....+.. ++|+.|++++ +.+++ +|++|
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~------Y~~~~G~~----~lReaia~~~~~~~~~~~~~~-~I~it 214 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEG------YSDSKGLF----SARKAIMQYAQLKGLPNVDVD-DIYTG 214 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCC------CCCCcChH----HHHHHHHHHHHhcCCCCCChh-HEEEe
Confidence 45677776444 34578888888877642211 22222233 4555555555 45555 89887
Q ss_pred CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHH
Q 043646 146 GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRS 223 (625)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~ 223 (625)
+|++++|..++.++ +++||+ |+++.+.|+.+...++..|++++.+++++ ++.+|+++|++
T Consensus 215 -~G~~eal~~~~~~l---------------~~~Gd~--Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~ 276 (517)
T PRK13355 215 -NGVSELINLSMSAL---------------LDDGDE--VLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRS 276 (517)
T ss_pred -CcHHHHHHHHHHHh---------------CCCCCE--EEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHH
Confidence 89999999998887 578986 99999999999888888999999999875 35799999999
Q ss_pred HHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcC----CCccccCCCCCCCCCcEEEEcC
Q 043646 224 QLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVKINLRSRNIDGYDAIFLAT 296 (625)
Q Consensus 224 ~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~----g~~~id~~~~~~~~~D~v~~S~ 296 (625)
+++ ++++++++++|+||||.+.+ +++|+++|++||+++++|+++.- +.....+..+..+..-+++.|+
T Consensus 277 ~~~-----~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~ 351 (517)
T PRK13355 277 KIT-----SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGL 351 (517)
T ss_pred hcC-----cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecc
Confidence 887 68999999999999999988 78899999999999999999652 1111111111111111334689
Q ss_pred CCCCCCCC-CceEEEEe--ccccc--cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHH
Q 043646 297 HKFLGGPG-TPGILLIS--KALYQ--LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWV 371 (625)
Q Consensus 297 hK~lggp~-g~G~l~v~--~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~ 371 (625)
+|.++.|+ .+|+++++ +++.. ...+.. ......+.+.+.+. ++...+
T Consensus 352 SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~-------------------------~~~~~~~~~~~~q~--a~~~aL- 403 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGNKRIAKDYIEGLNM-------------------------LANMRLCSNVPAQS--IVQTAL- 403 (517)
T ss_pred hhhccCcccceEEEEeeCchhhHHHHHHHHHH-------------------------HhcCcCCcChHHHH--HHHHHh-
Confidence 99987554 38999965 32200 000000 00001111122221 111111
Q ss_pred HhhcCHH-HH--HHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC-ChHHHHHHh
Q 043646 372 KEYIGYE-VI--KKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL-HGPFVATLF 447 (625)
Q Consensus 372 ~~~~g~~-~i--~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l-~~~~v~~~L 447 (625)
......+ .+ ..+..+.++++.+.|.++|++++..|. ++.+.|.-.+.. ..++ +..+++..+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~----g~fy~~~~l~~~-----------~~~~~~~~~~~~~l 468 (517)
T PRK13355 404 GGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPK----AAFYIFPKIDVK-----------KFNIHDDEQFALDL 468 (517)
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCC----eeeEEEeecCcc-----------cCCCCCHHHHHHHH
Confidence 1111111 11 122334478888999888888877663 345444333210 0011 233455554
Q ss_pred hhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 448 NDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 448 ~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+++.||.+++|..|+.+ .++++||++. .++++++..++.|.+++..
T Consensus 469 l~~~gV~v~pg~~F~~~---------------------------~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 469 LHDKKVLIVQGTGFNWD---------------------------KPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HHhCCEEEeCcchhCCC---------------------------CcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 46689999999877421 2589999995 6889999999999988754
No 98
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.91 E-value=4.1e-22 Score=211.13 Aligned_cols=324 Identities=16% Similarity=0.115 Sum_probs=213.1
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
.++.+.+++.+........+. ..+..++.+.+.+++.+.+|.+ ++++|++| +|++.++..++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit-~Gs~~ai~~~~~~~------ 80 (350)
T TIGR03537 14 TPPFIRKALIDAVPEVSQYPS------ALGTKALREAISGWFERRFGVKLDPDAQVLPS-AGSKEAIFHFPLVF------ 80 (350)
T ss_pred CCHHHHHHHHHHHhccCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEc-CChHHHHHHHHHHH------
Confidence 356777777765432211111 1123455666666666666753 43379988 89999999988877
Q ss_pred hhhhhhhhccCCCC-ceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-C-CCCCHHHHHHHHHHhhhCCCCeEEEEeccc
Q 043646 167 IMRDKLITSLRDEE-RWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-N-GLLDIEALRSQLELYKAAKRPMLGSFSACS 243 (625)
Q Consensus 167 ~~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~ 243 (625)
+++|| ...|+++.+.|+.+...++..|++++.++++. + ..+|++++++++. ++++++++++++
T Consensus 81 ---------~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----~~~~~i~i~~p~ 146 (350)
T TIGR03537 81 ---------IDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-----EETKIVWINYPH 146 (350)
T ss_pred ---------cCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-----hccEEEEEeCCC
Confidence 35652 12499999999999989999999999999974 3 3589999999887 478999999999
Q ss_pred CccccccC---HHHHHHHHHHcCCEEEEeccCcCCC---ccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEecccc
Q 043646 244 NVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY---VKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALY 316 (625)
Q Consensus 244 n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~---~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~ 316 (625)
||||.+.+ +++|+++|++||+++++|++++... ....+..... .-.+++.|++|.+|.|+ .+|+++.++.+.
T Consensus 147 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~ 225 (350)
T TIGR03537 147 NPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGI-ENVLAFHSLSKRSGMTGYRSGFVAGDEKLI 225 (350)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCc-CCEEEEeecccccCCccccceeeecCHHHH
Confidence 99999988 7889999999999999999976321 1112222111 12366779999998664 379988776652
Q ss_pred ccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC
Q 043646 317 QLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~ 396 (625)
..+... ...+..++++..+.+. ...+. .....+.++.+.+...+.+.+.|.
T Consensus 226 --~~~~~~------------------------~~~~~~~~~~~~q~~~--~~~l~-~~~~~~~~r~~l~~~~~~~~~~l~ 276 (350)
T TIGR03537 226 --SFLRKL------------------------RANFGVASPDFVQAAA--KAAWS-DDNHVLERRKIFKRKRDLFIEFFN 276 (350)
T ss_pred --HHHHHH------------------------HHhhccCCCHHHHHHH--HHHhC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 1111122333322211 12221 222234556677777888888887
Q ss_pred CCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhh
Q 043646 397 PNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476 (625)
Q Consensus 397 ~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~ 476 (625)
+. ++++..+ .++.+.+...+. .++..++++.|.+ +||.+++|..|+..
T Consensus 277 ~~-g~~~~~~----~g~~~~~~~~~~--------------~~~~~~l~~~L~~-~gv~v~~g~~f~~~------------ 324 (350)
T TIGR03537 277 KV-GLEYLYP----DATFYLWVKVPS--------------GIDAKDYALRLLE-NGIVVAPGENFGSG------------ 324 (350)
T ss_pred HC-CCcccCC----CeEEEEEEECCC--------------CCCHHHHHHHHHH-CCEEEcCchhhCCC------------
Confidence 76 6665544 234444444432 1345688888866 79999998766411
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 477 ~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
.++++||++. .++++++..++.|++
T Consensus 325 ---------------~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 325 ---------------EEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred ---------------CCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 2488999985 578999998888764
No 99
>PLN02721 threonine aldolase
Probab=99.91 E-value=1.5e-22 Score=214.49 Aligned_cols=321 Identities=13% Similarity=0.124 Sum_probs=204.6
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
+.+++.+.+++..... + +. .+.++ ....++++.+++++|.+. ++++++|+.+++ .++.++
T Consensus 16 ~~~~~~~~~a~~~~~~----~-~~-~~~~~----~~~~~l~~~la~~~~~~~---~~~~~~Gs~a~~-~~l~~~------ 75 (353)
T PLN02721 16 TKPTDAMRAAMANAEV----D-DD-VLGYD----PTALRLEEEMAKIFGKEA---ALFVPSGTMGNL-ISVLVH------ 75 (353)
T ss_pred cCCCHHHHHHHHhccC----C-Cc-ccCCC----HHHHHHHHHHHHHhCCce---eEEecCccHHHH-HHHHHH------
Confidence 3456778888754311 1 11 11111 225779999999999853 456657887765 333333
Q ss_pred hhhhhhhhccC-CCCceEEEEcCCCCchhHH---HHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh--CCCCeEEEEe
Q 043646 167 IMRDKLITSLR-DEERWVVFLGPYEHHSNLL---SWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA--AKRPMLGSFS 240 (625)
Q Consensus 167 ~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~---~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~--~~~~~lv~~~ 240 (625)
.. +||+ |+++.++|.+... .....|++++.++.++++.+|++++++++++... .+++++|+++
T Consensus 76 ---------~~~~gd~--Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 144 (353)
T PLN02721 76 ---------CDVRGSE--VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLE 144 (353)
T ss_pred ---------ccCCCCe--EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEe
Confidence 24 7885 9999999877665 3456799999999888888999999999973110 1368999997
Q ss_pred cc-cCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc---cccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEec
Q 043646 241 AC-SNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---KINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK 313 (625)
Q Consensus 241 ~~-~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~---~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~ 313 (625)
++ +|+||.+.| +++|.++|+++|+++++|+|+..+.. ..+.... ..++|++++++||++++|.| ++++.++
T Consensus 145 ~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~-~~~~d~~~~s~sK~l~~~~G-~~~~~~~ 222 (353)
T PLN02721 145 NTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL-VKAADSVSVCLSKGLGAPVG-SVIVGSK 222 (353)
T ss_pred ccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH-hhhCCEEEEecccccCCcee-eEEecCH
Confidence 75 577899877 68999999999999999999765431 1111111 12689999999999997764 4566666
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~ 392 (625)
++. ..+.+... ...+++...+. ..+++..+ +. ..+.+ ++...+++++.
T Consensus 223 ~~~--~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~l--~~-~~~~~-~~~~~~~~~l~ 271 (353)
T PLN02721 223 SFI--RKAKRLRK-------------------------TLGGGMRQVGVLAAAALVAL--QE-NVPKL-EDDHKKAKLLA 271 (353)
T ss_pred HHH--HhHHHHHH-------------------------hcCCCeehhHHHHHHHHHHH--HH-HHHHH-HHHHHHHHHHH
Confidence 652 22111100 00111111111 11111111 11 12222 23355678899
Q ss_pred HhhCCCCcEEE-eCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhc
Q 043646 393 GRILPNQNIQV-LGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLA 471 (625)
Q Consensus 393 ~~L~~l~gv~v-~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~ 471 (625)
+.|.+++++++ +.+. ..+++.+.+... .+.+...+++.|. ++||.++++.
T Consensus 272 ~~L~~~~~~~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~~~L~-~~gi~v~~~~------------ 322 (353)
T PLN02721 272 EGLNQIKGLRVNVAAV---ETNIVYFDITDG-------------SRITAEKLCKSLE-EHGVLLMPGN------------ 322 (353)
T ss_pred HHHHhCCCcEEecCCc---cceEEEEEccCC-------------ccccHHHHHHHHH-hCCcEEecCC------------
Confidence 99988888865 3332 234444433221 1124568999996 5899998651
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
++++|++++++++++|+++++++|++++.
T Consensus 323 ---------------------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 323 ---------------------SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ---------------------CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 37899999999999999999999998764
No 100
>PRK07682 hypothetical protein; Validated
Probab=99.91 E-value=2.8e-22 Score=214.72 Aligned_cols=330 Identities=12% Similarity=0.044 Sum_probs=219.3
Q ss_pred hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 90 LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 90 p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
+..+.+++.+.+.... . .|....+..++.+.+.+++.+.+|.. ++++|++| +|+++++..++.++
T Consensus 35 ~~~~~~~~~~~~~~~~----~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~l------- 101 (378)
T PRK07682 35 PWNVREASIRSLEQGY----T-SYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVT-VGASQALDVAMRAI------- 101 (378)
T ss_pred CHHHHHHHHHHHhcCC----C-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CChHHHHHHHHHHh-------
Confidence 4556777766553210 0 11112234556666666666665653 33379998 78889999888877
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~ 245 (625)
+++||+ |+++.+.|+.+...++..|++++.++++. ++.+|+++|++++. ++++++++++|+||
T Consensus 102 --------~~~gd~--vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~~~~p~NP 166 (378)
T PRK07682 102 --------INPGDE--VLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-----AKTKAILLCSPNNP 166 (378)
T ss_pred --------CCCCCE--EEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-----cccEEEEEECCCCC
Confidence 578886 88999999988877888899999998863 46799999999887 57899999999999
Q ss_pred cccccC---HHHHHHHHHHcCCEEEEeccCcCCCcc---ccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccc
Q 043646 246 TGIYSD---TRSIARLLHQYGGFACFDFAASGPYVK---INLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQ 317 (625)
Q Consensus 246 TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~~---id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~ 317 (625)
||.+.+ +++|+++|++|++++++|++++..... ..+..+ ......+++.|++|.|+.|+ .+|++++++++.
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i- 245 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFS- 245 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHH-
Confidence 999976 788999999999999999996633211 111111 01133577889999998554 489999988773
Q ss_pred cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 318 LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
+.+.... .....+++.+.+ .++.+++.......+.++++.++.++++.+.|++
T Consensus 246 -~~l~~~~------------------------~~~~~~~~~~~q--~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 298 (378)
T PRK07682 246 -EAMLKIH------------------------QYSMMCAPTMAQ--FAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE 298 (378)
T ss_pred -HHHHHHH------------------------HhhccCCCHHHH--HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221100 000112233322 2223333111122456667777788889999988
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
+ ++++..+. ++.+.|...+. .+++..++++.|.+++||.+++|..|+..
T Consensus 299 ~-~~~~~~p~----g~~~~~~~~~~-------------~~~~~~~~~~~ll~~~gv~v~pg~~f~~~------------- 347 (378)
T PRK07682 299 I-GLTCHVPG----GAFYAFPSISS-------------TGLSSEEFAEQLLLEEKVAVVPGSVFGES------------- 347 (378)
T ss_pred C-CCccCCCC----eeEEEEEeccC-------------CCCCHHHHHHHHHHhCCEEEcCchhhCcC-------------
Confidence 7 67665542 34444443321 12346678888766689999998766411
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++|||++. ++++++..++.|+++++.
T Consensus 348 --------------~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 348 --------------GEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred --------------CCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 24899999984 689999999999987754
No 101
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.91 E-value=2.6e-22 Score=217.02 Aligned_cols=330 Identities=17% Similarity=0.123 Sum_probs=216.2
Q ss_pred hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhh
Q 043646 90 LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMR 169 (625)
Q Consensus 90 p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (625)
++.|.+++.+.+..+..+.+ .+...........++++.+++++|.+ + .++|+ +|++++...+..+..
T Consensus 62 ~p~v~~a~~~~~~~~~~~~~--~s~~~~g~~~~~~~l~~~la~~~g~~-~-~~~~~-sG~~an~~ai~~l~~-------- 128 (407)
T PRK09064 62 HPKVIEAMIEALDRCGAGAG--GTRNISGTNHYHVELERELADLHGKE-A-ALVFT-SGYVSNDATLSTLAK-------- 128 (407)
T ss_pred CHHHHHHHHHHHHHcCCCCC--CcCcCccCHHHHHHHHHHHHHHhCCC-c-EEEEC-cHHHHHHHHHHHHhC--------
Confidence 45799999888765422222 11122223567788999999999953 3 56665 888775554433321
Q ss_pred hhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc
Q 043646 170 DKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY 249 (625)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~ 249 (625)
..+++ +|+...+.|.+...+++..|+++..++. .|+++|++.++.. ..+++++|++++++|++|.+
T Consensus 129 ------~~~~~--~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~-~~~~~~~v~~~~v~s~~G~~ 194 (407)
T PRK09064 129 ------LIPDC--VIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAA-DPDRPKLIAFESVYSMDGDI 194 (407)
T ss_pred ------CCCCC--EEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhc-cCCCCeEEEEeCCCCCCccc
Confidence 23444 4677778899888888888888776664 3788999888631 11468999999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEeccCcCCCc-cc--cCCC-CC-CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCc
Q 043646 250 SDTRSIARLLHQYGGFACFDFAASGPYV-KI--NLRS-RN-IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPS 324 (625)
Q Consensus 250 ~~l~~I~~la~~~g~~vivD~A~~~g~~-~i--d~~~-~~-~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~ 324 (625)
.|+++|.++|++||+++++|+||+.|.. +. .+.. .+ .+.+|+++.+++|.||.++ |+++.++++.. .+...
T Consensus 195 ~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~~~~~~~~~~--~l~~~ 270 (407)
T PRK09064 195 APIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG--GYIAGSAALVD--AVRSY 270 (407)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC--ceEecCHHHHH--HHHHh
Confidence 9999999999999999999999985532 11 1100 01 1256899999999998544 78888777622 11110
Q ss_pred ccCCceEEeeccccccccccccchhhhhcCCChhHH-HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEE
Q 043646 325 TCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV-QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQV 403 (625)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~-~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v 403 (625)
.. ...+..+.++.. ..+.+++++. +.. +...++.+.+++++.+.|.++ ++++
T Consensus 271 ~~----------------------~~~~t~~~~~~~~~aa~~al~~~--~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~ 323 (407)
T PRK09064 271 AP----------------------GFIFTTSLPPAIAAAALASIRHL--KES--NEERERHQERAAKLKAALDAA-GIPV 323 (407)
T ss_pred Cc----------------------cccccCcCCHHHHHHHHHHHHHH--hcC--HHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 00 000112233322 2233455554 222 334567788899999999876 6666
Q ss_pred eCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHH
Q 043646 404 LGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSA 483 (625)
Q Consensus 404 ~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~ 483 (625)
+.+ ..+++.+.+... ....++.+.|.+++||.+++....+.+.
T Consensus 324 ~~~----~~~iv~i~~~~~---------------~~~~~l~~~L~~~~gi~v~~~~~p~~~~------------------ 366 (407)
T PRK09064 324 MPN----ESHIVPVMVGDP---------------EKCKKASDMLLEEHGIYVQPINYPTVPR------------------ 366 (407)
T ss_pred CCC----CCCEEEEEeCCH---------------HHHHHHHHHHHHhCCEEEeeECCCCCCC------------------
Confidence 543 245555544211 1245788887666799998644322110
Q ss_pred HHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 484 IQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 484 ~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..+++||+++.++|++|+++++++|++++.+
T Consensus 367 --------~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 367 --------GTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred --------CCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1367999999999999999999999998764
No 102
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.91 E-value=1.6e-22 Score=216.91 Aligned_cols=334 Identities=15% Similarity=0.089 Sum_probs=217.3
Q ss_pred EeccCCCC---Cc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 79 TYADHTAS---GR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 79 ~Yld~~~~---~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
-|+|.++. +. +++.|.+++.+.+..+. .... .+..........++++++++++++. ++.++++ +|+.+++.
T Consensus 40 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~-~~~~~~g~~~~~~~l~~~la~~~~~--~~~i~~~-~g~~~~~~ 114 (385)
T PRK05958 40 RMLNFASNDYLGLARHPRLIAAAQQAARRYG-AGSG-GSRLVTGNSPAHEALEEELAEWFGA--ERALLFS-SGYAANLA 114 (385)
T ss_pred eEEEeeCCCcccCCCCHHHHHHHHHHHHhcC-CCCC-CcCcccCCcHHHHHHHHHHHHHhCC--CcEEEEC-cHHHHHHH
Confidence 35555543 33 56789999988885432 1111 1111122345678899999999984 2245554 77776654
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
++..+ +++||. |++++++|+++...+...|++++.++. .|+++++++++.. .+.+
T Consensus 115 -~l~~~---------------~~~gd~--V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~--~~~~ 169 (385)
T PRK05958 115 -VLTAL---------------AGKGDL--IVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKW--RAGR 169 (385)
T ss_pred -HHHHh---------------CCCCCE--EEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhc--cCCC
Confidence 43443 478885 999999999999888888999988875 3889999988731 1246
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc---C---CCCCCCCCcEEEEcCCCCCCCCCCceE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN---L---RSRNIDGYDAIFLATHKFLGGPGTPGI 308 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id---~---~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (625)
+++++.++.|+||.+.|+++|+++|++||+++|+|++|+.+..... . ........++++.|+||+|+. .| |+
T Consensus 170 ~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G-g~ 247 (385)
T PRK05958 170 ALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGS-SG-AA 247 (385)
T ss_pred eEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhccc-CC-cE
Confidence 7888888999999999999999999999999999999976543211 0 011111334778899999974 44 78
Q ss_pred EEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH-HHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 043646 309 LLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV-QMIRAALAFWVKEYIGYEVIKKQEDVY 387 (625)
Q Consensus 309 l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~-~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (625)
++.++++.+ .+.... . ...+..+.+++. ..+.+++++. +.. +.+.++...+
T Consensus 248 ~~~~~~~~~--~~~~~~---~-------------------~~~~~~~~~~~~~aa~~aal~~~--~~~--~~~~~~~~~~ 299 (385)
T PRK05958 248 VLGSETLID--YLINRA---R-------------------PFIFTTALPPAQAAAARAALRIL--RRE--PERRERLAAL 299 (385)
T ss_pred EEcCHHHHH--HHHHhC---c-------------------cceecCCCCHHHHHHHHHHHHHH--hcC--HHHHHHHHHH
Confidence 877766521 110000 0 000111222222 1223444443 221 5677888888
Q ss_pred HHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhH
Q 043646 388 IESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGH 467 (625)
Q Consensus 388 ~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~ 467 (625)
++++.+.|+++ ++++..+ .++++.|.+... .+..++.+.|.+ +||.++++..+..+.
T Consensus 300 ~~~l~~~L~~~-~~~~~~~----~~~~~~~~~~~~---------------~~~~~~~~~l~~-~gI~v~~~~~~~~~~-- 356 (385)
T PRK05958 300 IARLRAGLRAL-GFQLMDS----QSAIQPLIVGDN---------------ERALALAAALQE-QGFWVGAIRPPTVPA-- 356 (385)
T ss_pred HHHHHHHHHHc-CCCcCCC----CCCEEEEEeCCH---------------HHHHHHHHHHHH-CCceEecccCCCCCC--
Confidence 99999999876 5665433 345666654211 124578888865 699998643221110
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.++++||+++.+++++|+++++++|+++
T Consensus 357 ------------------------~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 357 ------------------------GTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred ------------------------CCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 1368999999999999999999999875
No 103
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.91 E-value=2.8e-22 Score=215.76 Aligned_cols=338 Identities=11% Similarity=0.072 Sum_probs=214.8
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~ 154 (625)
.+.|+.+... +.|..+.+++.+.+.. +....|....+..++.+++.+++.+.+|. ++++.|++| +|++++|.
T Consensus 37 ~i~l~~g~p~~~~p~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt-~G~~~al~ 111 (394)
T PRK05942 37 LIDLGMGNPDGAAPQPVIEAAIAALAD----PQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPL-LGSKEGLT 111 (394)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhC----CCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEc-cChHHHHH
Confidence 4455543322 2455677776665531 11111221222345556666666665564 343247777 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~~ 232 (625)
.++.++ +++||+ |+++.++|+.+...+...|++++.++++.+ +.+|++++++++. +
T Consensus 112 ~~~~~~---------------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----~ 169 (394)
T PRK05942 112 HLALAY---------------VNPGDV--VLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-----Q 169 (394)
T ss_pred HHHHHh---------------CCCCCE--EEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-----c
Confidence 998877 578986 999999999988778888999999998753 4699999999886 5
Q ss_pred CCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCCCCCCC
Q 043646 233 RPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKFLGGPG 304 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~lggp~ 304 (625)
+++++++++|+||||.+.+ +++|+++|+++|+++|+|++++... ....+.... .....+++.|++|.||.|+
T Consensus 170 ~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G 249 (394)
T PRK05942 170 QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG 249 (394)
T ss_pred cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChh
Confidence 8999999999999999988 7788999999999999999965221 111221110 0123466789999997554
Q ss_pred -CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHH
Q 043646 305 -TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKK 382 (625)
Q Consensus 305 -g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~ 382 (625)
.+|++++++++. +.+.... .....+.+.+.+.+ .+++.. .....+.+++
T Consensus 250 lRiG~i~~~~~l~--~~l~~~~------------------------~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~ 300 (394)
T PRK05942 250 WRVGFVVGNRHII--QGLRTLK------------------------TNLDYGIFSALQKAAETALQL---PDSYLQQVQE 300 (394)
T ss_pred hheeeeecCHHHH--HHHHHHH------------------------hhcccCCCHHHHHHHHHHHhC---cHHHHHHHHH
Confidence 489999888772 2221100 00011222332221 222221 1123456677
Q ss_pred HHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC
Q 043646 383 QEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA 462 (625)
Q Consensus 383 ~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~ 462 (625)
+.++.++++.+.|.+. ++.+..+ .++.+.|...+. +++..+++..+++++||.+++|..|.
T Consensus 301 ~~~~~~~~~~~~L~~~-~~~~~~~----~~~~f~~~~~~~--------------~~~~~~~~~~~l~~~gV~v~~g~~f~ 361 (394)
T PRK05942 301 RYRTRRDFLIQGLGEL-GWNIPPT----KATMYLWVPCPV--------------GMGSTDFALNVLQKTGVVVTPGNAFG 361 (394)
T ss_pred HHHHHHHHHHHHHHHC-CCeecCC----CeeeEEEEECCC--------------CCCHHHHHHHHHHHCCEEEeCChhhC
Confidence 7777788888888776 6766544 345555544432 13355676666566899999887553
Q ss_pred chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 463 GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.. .++++||+++ .+.+.+.++|+.+...
T Consensus 362 ~~---------------------------~~~~iRis~~-----~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 362 EG---------------------------GEGYVRISLI-----ADCDRLGEALDRLKQA 389 (394)
T ss_pred cC---------------------------CCCeEEEEec-----CCHHHHHHHHHHHHHh
Confidence 10 2489999996 2356667777666543
No 104
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=8.8e-22 Score=213.71 Aligned_cols=345 Identities=14% Similarity=0.038 Sum_probs=223.9
Q ss_pred CceEeccCCCC-----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC----C--CCCCcEEE
Q 043646 76 RRLTYADHTAS-----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG----G--GQADAIIF 144 (625)
Q Consensus 76 ~~~~Yld~~~~-----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g----~--~~~~~vif 144 (625)
++++.|..+.. .+.|+.+.+++.+.+..-..+ .|....+ ..++|+.++++++ . +++ +|++
T Consensus 52 ~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~----~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~-~v~i 122 (430)
T PLN00145 52 RPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYN----SYSTCVG----LLPARRAIAEYLSRDLPYELSTD-DIYL 122 (430)
T ss_pred CCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCC----CCCCCcc----CHHHHHHHHHHHhhccCCCCChh-hEEE
Confidence 46788887643 456788999998877431111 1111112 2345555555553 2 344 7999
Q ss_pred eCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHH
Q 043646 145 CGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALR 222 (625)
Q Consensus 145 t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~ 222 (625)
| +|++++|..++.++ +++||+ |+++.+.|+.+.......|++++.+++.+ ++.+|+++|+
T Consensus 123 t-~G~~~al~l~~~~l---------------~~~Gd~--Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 184 (430)
T PLN00145 123 T-AGCAQAIEIIMSVL---------------AQPGAN--ILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVE 184 (430)
T ss_pred e-CCHHHHHHHHHHHh---------------cCCCCE--EEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHH
Confidence 8 89999999998887 478886 99999999988777778899999998753 4679999999
Q ss_pred HHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEc
Q 043646 223 SQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLA 295 (625)
Q Consensus 223 ~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S 295 (625)
++++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++++.-. ....+..+.....-+++.|
T Consensus 185 ~~~~-----~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S 259 (430)
T PLN00145 185 ALAD-----ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGS 259 (430)
T ss_pred HHhC-----cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEec
Confidence 9887 57999999999999999988 7788899999999999999965311 1122211111122366679
Q ss_pred CCCCCCCCC-CceEEEEec--cccccCCCCCcccCCceEEeeccccccccccccchhhhhc--CCChhHHHHHHHHHHHH
Q 043646 296 THKFLGGPG-TPGILLISK--ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN--GGTPQIVQMIRAALAFW 370 (625)
Q Consensus 296 ~hK~lggp~-g~G~l~v~~--~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~~aal~~~ 370 (625)
++|.++.|+ .+|++++.. .+. .... .. ..+..... .+++.+.+ .++..+
T Consensus 260 ~SK~~~~pG~RlG~iv~~~~~~~~--~~~~-~~--------------------~~~~~~~~~~~~~~~~~Q---~a~~~~ 313 (430)
T PLN00145 260 ISKRWVVPGWRLGWIATCDPNGIL--KETK-VV--------------------DSIRNYLNISTDPATFVQ---GAIPQI 313 (430)
T ss_pred cccccCCCCeeEEEEEEecchhhh--hhhH-HH--------------------HHHHHHhcccCCCCHHHH---HHHHHH
Confidence 999988775 489999843 221 1000 00 00000001 11222222 222222
Q ss_pred HHh--hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEe-CCCCCCCcceEEEEeccCCCCCCccccccCCCCC-ChHHHHHH
Q 043646 371 VKE--YIGYEVIKKQEDVYIESALGRILPNQNIQVL-GNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL-HGPFVATL 446 (625)
Q Consensus 371 ~~~--~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~-~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l-~~~~v~~~ 446 (625)
+.+ ....+...+..+..++.+.+.|+.++++.+. .| .++.+.|.-.+.. ....+ +..+++..
T Consensus 314 l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P----~ga~y~~v~l~~~----------~~~~~~~~~~~~~~ 379 (430)
T PLN00145 314 IANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKP----EGSMFVMVKLDLS----------CLSGIKDDMDFCCK 379 (430)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCC----CeeeEEEeccChh----------hcCCCCCHHHHHHH
Confidence 221 1224566667777788899999888887653 33 3455554433210 00011 34567766
Q ss_pred hhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 447 FNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 447 L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
|+++.||.+.+|..|+ .++|+||+++ .+.++++..++.|++++...
T Consensus 380 ll~~~gV~v~pG~~fg-----------------------------~~~~lRis~~--~~~~~l~~al~rl~~~~~~~ 425 (430)
T PLN00145 380 LAKEESVVVLPGSALG-----------------------------MKNWLRITFA--IDPPSLEDGLERLKSFCLRH 425 (430)
T ss_pred HHHhCCEEEeCccccC-----------------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 7677899999998764 2489999998 37888999999888887654
No 105
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=1.6e-22 Score=214.99 Aligned_cols=319 Identities=14% Similarity=0.073 Sum_probs=213.2
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
...+.|+.+... ++|+.+.+++.+.+......|.. -..++|+.|++++|++++ +|++| +|++++|.
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~-----------g~~~Lr~aia~~~~~~~~-~I~vt-~Gs~e~i~ 95 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDG-----------GATTLRQTIANKLHVKME-QVLCG-SGLDEVIQ 95 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCC-----------CHHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHH
Confidence 456777766655 46678888887765322111211 134588999999999877 89998 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++.++ +++||. |+++.+.|+.+...++..|++++.|+++. +.+|+++|+++++ +++
T Consensus 96 ~~~~~l---------------~~~gd~--vlv~~P~y~~~~~~~~~~g~~v~~v~~~~-~~~d~~~l~~~~~-----~~~ 152 (366)
T PRK01533 96 IISRAV---------------LKAGDN--IVTAGATFPQYRHHAIIEGCEVKEVALNN-GVYDLDEISSVVD-----NDT 152 (366)
T ss_pred HHHHHh---------------cCCCCE--EEEcCCcHHHHHHHHHHcCCEEEEeecCC-CCcCHHHHHHHhC-----cCC
Confidence 998887 578885 99999999999888889999999999864 5689999999886 578
Q ss_pred eEEEEecccCccccccCHHHHHHHHH---HcCCEEEEeccCcCCCccc---c-CCCCCCCCCcEEEEcCCCCCCCCC-Cc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLH---QYGGFACFDFAASGPYVKI---N-LRSRNIDGYDAIFLATHKFLGGPG-TP 306 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~---~~g~~vivD~A~~~g~~~i---d-~~~~~~~~~D~v~~S~hK~lggp~-g~ 306 (625)
+++++++|+||||.+.+.+++.++++ +++ ++++|+++..-...- . +.......--+++.|++|.||.|+ .+
T Consensus 153 ~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRi 231 (366)
T PRK01533 153 KIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRV 231 (366)
T ss_pred cEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHH
Confidence 99999999999999999777666655 444 678899964211000 0 011101123467789999998564 38
Q ss_pred eEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 043646 307 GILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDV 386 (625)
Q Consensus 307 G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (625)
|+++.++++. +.+.... .....+.+.. .++..++ .+....+.+.+..++
T Consensus 232 G~~i~~~~~~--~~l~~~~---------------------------~~~~~~~~~q-~aa~~~l-~~~~~~~~~~~~~~~ 280 (366)
T PRK01533 232 GYAVGHEELI--EKLNVVR---------------------------LPFNVSSLAQ-KAATIAF-GDDEFIEEIVRVNTE 280 (366)
T ss_pred hHHhCCHHHH--HHHHHhc---------------------------CCCCcCHHHH-HHHHHHh-CCHHHHHHHHHHHHH
Confidence 9999887762 2221100 0111222221 1222222 222223444555566
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG 466 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~ 466 (625)
.++++.+.|+.+ +++++.+. +++.+...+ +..++.+.|.+ +||.|++ |
T Consensus 281 ~r~~~~~~l~~~-g~~~~~~~-----~nf~~~~~~-----------------~~~~~~~~l~~-~GI~Vr~---~----- 328 (366)
T PRK01533 281 GLRQYESFCKEN-EIPFYQSQ-----TNFIFLPVE-----------------NGGEIYEACAH-AGFIIRP---F----- 328 (366)
T ss_pred HHHHHHHHHHhC-CCccCCCc-----CcEEEEeCC-----------------CHHHHHHHHHH-CCcEEcc---C-----
Confidence 677777777666 66665442 334333332 14578888865 8999994 2
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
++++||+++ +.+|+++|+++|+++++.-
T Consensus 329 --------------------------~~~iRis~~---~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 329 --------------------------PNGVRITVG---TREQNEGVISVLQQHFENK 356 (366)
T ss_pred --------------------------CCceEEeCC---CHHHHHHHHHHHHHHHHhc
Confidence 267999998 8999999999999887553
No 106
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.91 E-value=2.7e-22 Score=209.66 Aligned_cols=322 Identities=18% Similarity=0.162 Sum_probs=231.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhh
Q 043646 91 RYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRD 170 (625)
Q Consensus 91 ~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (625)
+.+++++.+.+..+....+ .+..-.++.....++++.||+++|.+. .++|+ +|-.+++..+....
T Consensus 56 ~~~~~a~~~~~~~~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~-SGy~AN~~~i~~l~---------- 120 (388)
T COG0156 56 PELIEAAKAAIRRYGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFS-SGFVANLGLLSALL---------- 120 (388)
T ss_pred HHHHHHHHHHHHHhCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEc-ccchhHHHHHHHhc----------
Confidence 3477777777765422222 222334567888999999999999974 58886 89999887775543
Q ss_pred hhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCC-CCeEEEEecccCccccc
Q 043646 171 KLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAK-RPMLGSFSACSNVTGIY 249 (625)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~-~~~lv~~~~~~n~TG~~ 249 (625)
+++| +|+....+|.|++.+++..+++++.++. .|+++|++.|.+....+ +.++|++..+.++.|.+
T Consensus 121 ------~~~d--li~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi 187 (388)
T COG0156 121 ------KKGD--LIFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI 187 (388)
T ss_pred ------CCCc--EEEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc
Confidence 4566 6999999999999999999999999886 48999999998632212 57899999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCC----C--CCCCcEEEEcCCCCCCCCCCceEEEEeccccc-c-CCC
Q 043646 250 SDTRSIARLLHQYGGFACFDFAASGPYVKINLRSR----N--IDGYDAIFLATHKFLGGPGTPGILLISKALYQ-L-GSS 321 (625)
Q Consensus 250 ~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~----~--~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~-l-~~~ 321 (625)
.|+++|++++++||++++||+||++|....+-+.. + ...+|+++.++.|.||+-+ |++..+..+.. + ...
T Consensus 188 ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G--g~v~g~~~~~d~L~~~a 265 (388)
T COG0156 188 APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG--GYIAGSAALIDYLRNRA 265 (388)
T ss_pred CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC--ceeeCcHHHHHHHHHhC
Confidence 99999999999999999999999998765332211 1 1245899999999998544 77777777632 1 111
Q ss_pred CCcccCCceEEeeccccccccccccchhhhhcCCChhH-HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 322 PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI-VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 322 ~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
+|+. |..+.|+. .+...++++.+. . ....+++.+.+..+++..+... +
T Consensus 266 r~~i--------------------------fStalpP~~aaa~~~al~~l~---~-~~~~r~~L~~~~~~~~~~~~~~-~ 314 (388)
T COG0156 266 RPFI--------------------------FSTALPPAVAAAALAALRILE---E-GPERRERLQELAAFFRSLLKAL-G 314 (388)
T ss_pred Ccee--------------------------ccCCCCHHHHHHHHHHHHHHH---h-CHHHHHHHHHHHHHHHHHHHhc-C
Confidence 2221 12223333 333455565552 1 2355677777888888666543 4
Q ss_pred EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHH
Q 043646 401 IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 401 v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~ 480 (625)
+.+... ..+|+.+.+.+.. ....+...|.++ ||.+.+...+++|.+
T Consensus 315 ~~~~~s----~s~I~pv~~gd~~---------------~a~~~s~~l~~~-Gi~v~~i~~PTVp~g-------------- 360 (388)
T COG0156 315 LVLLPS----ESPIIPVILGDEE---------------RALEASRALLEE-GIYVSAIRPPTVPKG-------------- 360 (388)
T ss_pred CccCCC----CCCeeeeEeCCHH---------------HHHHHHHHHHHC-CeeEeeecCCCCCCC--------------
Confidence 444222 4588887776532 145678888776 999999888876643
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
...+|+++...+|++||+++++++.++
T Consensus 361 ------------tarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 361 ------------TARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ------------cceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 367999999999999999999999865
No 107
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.4e-22 Score=213.17 Aligned_cols=324 Identities=16% Similarity=0.052 Sum_probs=217.3
Q ss_pred CceEeccCCCCCc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASGR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
...++|+.+.... +++.+.+++.+.+... .. .|.. . ...++|++++++++++++ +|++| +|++++|.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~---~~--~y~~----~-~~~~lr~aia~~~~~~~~-~I~it-~G~~~al~ 91 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDD---LR--LYPD----P-NADALRQAIAAYYGLDPE-QVFVG-NGSDEVLA 91 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhh---hh--cCCC----C-cHHHHHHHHHHHhCCCHH-HEEEc-CCHHHHHH
Confidence 3568888777654 4678888887765321 00 1110 0 125799999999998876 89998 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++.++ +++||+ |+++.+.|+.+....+..|++++.++.++++.+|+++|++ .+
T Consensus 92 ~~~~~l---------------~~~gd~--vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---------~~ 145 (353)
T PRK05387 92 HAFLAF---------------FNHDRP--LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR---------PN 145 (353)
T ss_pred HHHHHh---------------cCCCCE--EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh---------cC
Confidence 998887 578886 9999999877766667789999999998778899998752 35
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHc-CCEEEEeccCcCC--CccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGP--YVKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILL 310 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~-g~~vivD~A~~~g--~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~ 310 (625)
+++++++|+||||.+.+.+++.++++.+ ++++|+|++++.- .....+. ....-.+++.|++|.+|.|+ .+|+++
T Consensus 146 ~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~GlR~G~~~ 223 (353)
T PRK05387 146 GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLI--DRYPNLLVVQTFSKSRSLAGLRVGFAI 223 (353)
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHH--hhCCCEEEEEehhHhhcchhhhceeee
Confidence 7889999999999999999999999876 9999999996421 1111111 11133588889999997554 489999
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
.++++. ..+.... ......+.+..... ++...+ .+....++.+++.++.+++
T Consensus 224 ~~~~~~--~~l~~~~------------------------~~~~~~~~~~~~q~-~~~~~l-~~~~~~~~~~~~~~~~~~~ 275 (353)
T PRK05387 224 GHPELI--EALNRVK------------------------NSFNSYPLDRLAQA-GAIAAI-EDEAYFEETRAKVIATRER 275 (353)
T ss_pred cCHHHH--HHHHHhh------------------------ccCCCCCcCHHHHH-HHHHHh-cCHHHHHHHHHHHHHHHHH
Confidence 887762 2221100 00001122222211 111222 1222245666777778888
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
+.+.|.++ ++++..+ .+.+.|...++ .+..++++.|. ++||.++. |..+ .
T Consensus 276 l~~~L~~~-g~~~~~~-----~~~~~~~~~~~---------------~~~~~~~~~l~-~~gi~v~~---~~~~--~--- 325 (353)
T PRK05387 276 LVEELEAL-GFEVLPS-----KANFVFARHPS---------------HDAAELAAKLR-ERGIIVRH---FNKP--R--- 325 (353)
T ss_pred HHHHHHHC-CCeECCC-----cCcEEEEECCC---------------CCHHHHHHHHH-HCCEEEEE---CCCC--C---
Confidence 99999887 6765432 13333333321 24568888885 47999973 2211 0
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++||+++ +.+++++++++|++++.
T Consensus 326 ---------------------~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 326 ---------------------IDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred ---------------------CCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 2489999997 77999999999998754
No 108
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.91 E-value=2.3e-22 Score=213.53 Aligned_cols=323 Identities=16% Similarity=0.097 Sum_probs=215.4
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
.++.+.+++.+.+..+ +.... .+...........++++.++++++.+ + .++++ +|+++++. ++.++
T Consensus 31 ~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~-~-~i~~~-~G~~~~~~-~l~~~-------- 96 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQY-GAGST-ASRLVSGNSPLHEELEEELAEWKGTE-A-ALLFS-SGYLANVG-VISAL-------- 96 (360)
T ss_pred CCHHHHHHHHHHHHhc-CCCCC-CcCcccCCcHHHHHHHHHHHHHhCCC-C-EEEEC-chHHHHHH-HHHHh--------
Confidence 5578999998888542 22211 11111223456778999999999853 3 56676 78877665 34444
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccc
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGI 248 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~ 248 (625)
+++||. |++..++|+++...++..|++++.++. +|+++|++.++.. ..++++++++++++|+||.
T Consensus 97 -------~~~gd~--v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~-~~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 97 -------VGKGDL--ILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKN-RGERRKLIVTDGVFSMDGD 161 (360)
T ss_pred -------CCCCCE--EEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHc-ccCCCeEEEEeCCccCCCC
Confidence 467885 889999999999888889999988873 5899999988742 0125789999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEeccCcCCCcccc------CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCC
Q 043646 249 YSDTRSIARLLHQYGGFACFDFAASGPYVKIN------LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSP 322 (625)
Q Consensus 249 ~~~l~~I~~la~~~g~~vivD~A~~~g~~~id------~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~ 322 (625)
+.|+++|.++|+++|+++|+|++++.+....+ ......++.|+++.|++|+|++ .| |+++.++++.+ .+.
T Consensus 162 ~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~g-G~~~~~~~~~~--~~~ 237 (360)
T TIGR00858 162 IAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-YG-AYVAGSQALID--YLI 237 (360)
T ss_pred CcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-cC-cEEEcCHHHHH--HHH
Confidence 99999999999999999999999986543322 1111113668999999999985 44 88888777621 111
Q ss_pred CcccCCceEEeeccccccccccccchhhhhcCCChhHHH-HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE
Q 043646 323 PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQ-MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI 401 (625)
Q Consensus 323 p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv 401 (625)
+... ...+..++++... ...+++++. +. .+.+.++.+++++++.+.|.++ ++
T Consensus 238 ~~~~----------------------~~~~~~~~~~~~~~a~~~al~~~--~~--~~~~~~~~~~~~~~l~~~L~~~-~~ 290 (360)
T TIGR00858 238 NRAR----------------------TLIFSTALPPAVAAAALAALELI--QE--EPWRREKLLALIARLRAGLEAL-GF 290 (360)
T ss_pred HhCc----------------------cceecCCCCHHHHHHHHHHHHHH--hh--CHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 1000 0001112222221 223444433 21 2466788888999999999886 56
Q ss_pred EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHH
Q 043646 402 QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIR 481 (625)
Q Consensus 402 ~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~ 481 (625)
++..+ .++++.+..... .+..++.+.|.+ +||.++++..+..+.
T Consensus 291 ~~~~~----~~~~~~~~~~~~---------------~~~~~~~~~l~~-~gI~v~~~~~~~~~~---------------- 334 (360)
T TIGR00858 291 TLMPS----CTPIVPVIIGDN---------------ASALALAEELQQ-QGIFVGAIRPPTVPA---------------- 334 (360)
T ss_pred ccCCC----CCCEEEEEeCCH---------------HHHHHHHHHHHH-CCeeEeeeCCCCCCC----------------
Confidence 65432 344555444211 124578888855 799998654332110
Q ss_pred HHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 482 SAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 482 ~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
.++++||+++.+++++|+++++++|+
T Consensus 335 ----------~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 335 ----------GTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----------CCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 13689999999999999999999874
No 109
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=6.3e-22 Score=211.53 Aligned_cols=333 Identities=14% Similarity=0.064 Sum_probs=216.6
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS 201 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (625)
...++++.+++++|++ .++++ +|+++++..++.+++ +++||+ |+++..+|.++...+...
T Consensus 34 ~~~~le~~la~~~g~~---~~v~~-~sgt~al~lal~al~--------------~~~Gd~--Viv~~~~~~~~~~~~~~~ 93 (379)
T PRK11658 34 KNQALEQAFCQLTGNQ---HAIAV-SSATAGMHITLMALG--------------IGPGDE--VITPSLTWVSTLNMIVLL 93 (379)
T ss_pred hHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHcC--------------CCCCCE--EEECCCcHHHHHHHHHHc
Confidence 3678999999999985 45666 456677888887774 578886 999999999998888889
Q ss_pred CCeEEEEecCCC-CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc
Q 043646 202 LAEVVEIGLDDN-GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN 280 (625)
Q Consensus 202 G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id 280 (625)
|++++.++++.+ +.+|+++++++++ +++++|+ +.|++|...|+++|.++|+++|+++++|+||+.|....+
T Consensus 94 G~~~v~vd~~~~~~~~d~~~l~~~i~-----~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~ 165 (379)
T PRK11658 94 GATPVMVDVDRDTLMVTPEAIEAAIT-----PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKG 165 (379)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcc-----cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECC
Confidence 999999999864 4689999999997 5789887 445689999999999999999999999999998865442
Q ss_pred --CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEe-ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCCh
Q 043646 281 --LRSRNIDGYDAIFLATHKFLGGPGTPGILLIS-KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTP 357 (625)
Q Consensus 281 --~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~ 357 (625)
+... +.++++++.+|.+.++.| |+++.+ +++ ...+++...+|...+....+..... .....+..|+.
T Consensus 166 ~~~g~~---g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~~G~n 235 (379)
T PRK11658 166 RHIGAR---GTAIFSFHAIKNITCAEG-GLVVTDDDEL--ADRLRSLKFHGLGVDAFDRQTQGRA----PQAEVLTPGYK 235 (379)
T ss_pred eecCCC---CCEEEeCCCCCcCcccCc-eEEEECCHHH--HHHHHHHHHcCCCcchhhhhcccCC----Ccceeeccccc
Confidence 3332 667888888999876554 666665 344 2233333322222111000000000 00011233442
Q ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcc--eEEEEeccCCCCCCccccccCC
Q 043646 358 QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQA--ILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 358 ~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~--i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
.-..-+.+|+.+. +..+.+.+.++.+.+++++.+.|++++...+..+....+.. .+.+.+... .
T Consensus 236 ~~~~~l~AAl~~~--ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 301 (379)
T PRK11658 236 YNLADINAAIALV--QLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEE------------R 301 (379)
T ss_pred cCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCc------------c
Confidence 2122334555555 33467888899999999999999988654343332111112 223333211 1
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh-----cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL-----AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
.+++..++.+.|.+ .||.++..+.+. +.+.+. ..+-+.++++ ....+.+.++...|++|++
T Consensus 302 ~~~~r~~~~~~L~~-~gI~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~-----------~~~~l~lP~~~~l~~~~~~ 367 (379)
T PRK11658 302 CGISRDALMEALKE-RGIGTGLHFRAA--HTQKYYRERFPTLSLPNTEWN-----------SERICSLPLFPDMTDADVD 367 (379)
T ss_pred ccCCHHHHHHHHHH-CCCCCcccCcCc--ccChhhhccCCCCCChHHHHH-----------HhCeEEccCCCCCCHHHHH
Confidence 23457789999954 799876433211 111110 0111222222 2477899999999999999
Q ss_pred HHHHHHHHHH
Q 043646 511 FILAALEFIA 520 (625)
Q Consensus 511 ~ll~aL~~~~ 520 (625)
+++++|++++
T Consensus 368 ~i~~~i~~~~ 377 (379)
T PRK11658 368 RVITALQQIA 377 (379)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 110
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-21 Score=210.87 Aligned_cols=345 Identities=10% Similarity=0.036 Sum_probs=222.5
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC---CCCcEEEeCChHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG---QADAIIFCGAGTTAAI 153 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~---~~~~vift~sGttaal 153 (625)
.+.|..+... .+++.+.+++.+.+... ....|.. .+...+.+.+.+++.+..|.. ++++|++| +|++++|
T Consensus 46 ~i~L~~g~p~~~~~~~~~~~l~~~~~~~----~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it-~Gs~~al 119 (410)
T PRK06290 46 LIDMGVGEPDEMADESVVEVLCEEAKKP----ENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHS-IGSKPAL 119 (410)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhCC----CCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEc-cCHHHHH
Confidence 4555544333 24556777776654211 1111111 223455566666666555643 43368888 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAA 231 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~ 231 (625)
..++.++ +++||. |+++.+.|+.+...++..|++++.++++.+ ..+|++++++++.
T Consensus 120 ~~~~~~~---------------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~----- 177 (410)
T PRK06290 120 AMLPSCF---------------INPGDV--TLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK----- 177 (410)
T ss_pred HHHHHHh---------------CCCCCE--EEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-----
Confidence 9998887 578885 999999999888888889999999999853 4679999998886
Q ss_pred CCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc---cccCCCCC-CCCCcEEEEcCCCCCCCCC
Q 043646 232 KRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---KINLRSRN-IDGYDAIFLATHKFLGGPG 304 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~---~id~~~~~-~~~~D~v~~S~hK~lggp~ 304 (625)
+++++|++++|+||||.+.+ +++|.++|++||+++++|++++.... +..+.... ....++++.|++|.+|.|+
T Consensus 178 ~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~G 257 (410)
T PRK06290 178 EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTG 257 (410)
T ss_pred ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCch
Confidence 57999999999999999988 46788889999999999999663211 11221111 1134688889999997665
Q ss_pred -CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHH
Q 043646 305 -TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQ 383 (625)
Q Consensus 305 -g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~ 383 (625)
.+|+++.++.+. ..+.... .....+++...+. ++..++ .+..-.+.+.++
T Consensus 258 lRiG~ii~~~~l~--~~l~~~~------------------------~~~~~~~~~~~q~--aa~~~l-~~~~~~~~~~~~ 308 (410)
T PRK06290 258 WRLAFVVGNELIV--KAFATVK------------------------DNNDSGQFIAIQK--AGIYAL-DHPEITEKIREK 308 (410)
T ss_pred hheEeEEeCHHHH--HHHHHHH------------------------hccccCCcHHHHH--HHHHHh-hCcHHHHHHHHH
Confidence 389999887762 1111000 0011122222221 222222 121124456666
Q ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 384 EDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
.+..++++.+.|.++ ++.+..+ .++.+.|...++.... +....+..++++.|+++.+|.+.+|..|
T Consensus 309 ~~~~~~~l~~~L~~~-g~~~~~p----~g~f~l~v~lp~~~~~-------~~~~~~~~~~~~~Ll~~~~v~~~p~~~~-- 374 (410)
T PRK06290 309 YSRRLDKLVKILNEV-GFKAEMP----GGTFYLYVKAPKGTKS-------GIKFENAEEFSQYLIKEKLISTVPWDDA-- 374 (410)
T ss_pred HHHHHHHHHHHHHhC-CCeecCC----CeeeEEEEECCCcccc-------CCCCCCHHHHHHHHHHhCCEEEECCccc--
Confidence 777788888999886 6776654 3455555444421000 0001246688898988666776665432
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecC-CCCCHHHHHHHHHHHHHHHHh
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFP-YYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~-~~~t~edid~ll~aL~~~~~~ 522 (625)
++++||+++ .-.++++.++++++|++.+..
T Consensus 375 -----------------------------~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 375 -----------------------------GHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred -----------------------------cCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 278999995 556899999999999988765
No 111
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.91 E-value=6.3e-22 Score=211.67 Aligned_cols=354 Identities=17% Similarity=0.163 Sum_probs=227.2
Q ss_pred CcchHHHHHHHHHhhCCCC--CCCCCCcchhhHH-HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc
Q 043646 87 GRSLRYIEDYIINNVLPFY--GNTHTSDSYVGQR-MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGIT 163 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~-~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~ 163 (625)
...++.|.+++...+...| +.|+.- |+.|.. ..++...+.++.+++||++.. +|-.- ||+.+++..+...+.-.
T Consensus 59 N~~s~~v~~a~~s~l~nkyaeg~pg~r-yy~g~~~~d~ie~l~~~ra~~lf~a~~a-nvqp~-Sg~~An~~v~~all~~~ 135 (493)
T PRK13580 59 NYSSLAVQLAMGNLLTDKYAEGTPGHR-FYAGCQNVDTVEWEAAEHAKELFGAEHA-YVQPH-SGADANLVAFWAILAHK 135 (493)
T ss_pred ccCCHHHHHHhcccccccCcCCCCCcc-ccCCCchHHHHHHHHHHHHHHHhCCCcc-cccCC-CcHHHHHHHHHHHhccc
Confidence 3456688888877775544 344443 333333 455667788999999999876 56555 78988777666554210
Q ss_pred --cc-----c---------hhhhhhhhccCCCCceEEEEcCCCCchhH-----HHHHHcCCeEEEEecCC-CCCCCHHHH
Q 043646 164 --VP-----S---------IMRDKLITSLRDEERWVVFLGPYEHHSNL-----LSWRQSLAEVVEIGLDD-NGLLDIEAL 221 (625)
Q Consensus 164 --~~-----~---------~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-----~~~~~~G~~vv~v~~~~-~~~ld~~~L 221 (625)
.| + ..++.+.+.+ .||+ |+..+..|...+ ..+.....+++..+++. ++.+|++++
T Consensus 136 ~~~p~~~~~g~~~~~~~~~~~~~~~~~~~-~gd~--i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l 212 (493)
T PRK13580 136 VESPALEKLGAKTVNDLTEEDWEALRAEL-GNQR--LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEI 212 (493)
T ss_pred ccCcchhccccccccccchhhhhhhhccC-CCCE--EEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHH
Confidence 00 0 0000000000 1454 555444332221 11111234667777775 689999999
Q ss_pred HHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCC---CCCCCCcEEEEcCCC
Q 043646 222 RSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRS---RNIDGYDAIFLATHK 298 (625)
Q Consensus 222 ~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~---~~~~~~D~v~~S~hK 298 (625)
++.+. +++++|++++.+|.++ ..|+++|.++|+++|+++++|+||++|.+..+... ....++|++++|+||
T Consensus 213 ~~~~~-----~~~plvii~g~S~~~~-~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hK 286 (493)
T PRK13580 213 AALAR-----EFKPLILVAGYSAYPR-RVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHK 286 (493)
T ss_pred HHHHh-----hcCCEEEEeCccccCC-CcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChh
Confidence 99998 4678888889999955 77999999999999999999999999998766522 112478999999999
Q ss_pred CCCCCCCceEEEEeccccc-cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCH
Q 043646 299 FLGGPGTPGILLISKALYQ-LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGY 377 (625)
Q Consensus 299 ~lggp~g~G~l~v~~~~~~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~ 377 (625)
+|+||.| |++++++++.. ++...|.. .|++....++++++++........
T Consensus 287 aL~GP~G-G~I~~~~~l~~~L~~a~P~i----------------------------~gg~l~p~iAA~avAl~e~~~~ef 337 (493)
T PRK13580 287 TLRGPRG-GLVLAKKEYADAVDKGCPLV----------------------------LGGPLPHVMAAKAVALAEARTPEF 337 (493)
T ss_pred hccCCCe-EEEEecHHHHHHHhhCCCcc----------------------------cCCCccHHHHHHHHHHHHHhCccH
Confidence 9988997 99999988632 11112222 234333333333444332122234
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeec
Q 043646 378 EVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARG 457 (625)
Q Consensus 378 ~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~ 457 (625)
...+++...+++++.+.|.+. |+.++... ...+++.+.+.+. ......+.+.| .+.||.+..
T Consensus 338 ~~y~~~l~~Na~~La~~L~~~-G~~vv~gg--TdshIV~V~lg~~--------------~~~g~~a~~~L-~e~GI~vn~ 399 (493)
T PRK13580 338 QKYAQQVVDNARALAEGFLKR-GARLVTGG--TDNHLVLIDVTSF--------------GLTGRQAESAL-LDAGIVTNR 399 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCCccCCC--CCCCEEEEEeCCH--------------HHHHHHHHHHH-HHCCeEEcc
Confidence 567888999999999999886 77776421 1347777666432 11233566677 457999976
Q ss_pred CCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHh
Q 043646 458 GCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY----MSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 458 G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~----~t~edid~ll~aL~~~~~~ 522 (625)
-..++.|.+.. .+..|||++... ++++|++++++.|.+++..
T Consensus 400 i~~Ptvp~g~~-----------------------~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 400 NSIPSDPNGAW-----------------------YTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred ccCCCCCCCCC-----------------------CCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 55554332210 146799999874 4699999999999988764
No 112
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=5.8e-22 Score=212.79 Aligned_cols=322 Identities=15% Similarity=0.072 Sum_probs=216.6
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
.++.+.+++.+.+... .... ..+....+..++.+++++++++++|.+ . .++++ +|+++++ .++.++
T Consensus 48 ~~~~~~~a~~~~~~~~-~~~~-~~~~~~~g~~~l~~~l~~~l~~~~g~~-~-~i~~~-sG~~a~~-~a~~~~-------- 113 (385)
T TIGR01825 48 DHPRLKEAAAQAIQQY-GVGA-GAVRTIAGTLRLHEELEEKLAKFKKTE-A-ALVFQ-SGFNTNQ-GVLSAL-------- 113 (385)
T ss_pred CCHHHHHHHHHHHHHc-CCCC-CccCcccCCcHHHHHHHHHHHHHhCCC-c-EEEEC-cHHHHHH-HHHHHh--------
Confidence 6678888888877532 1111 111122234678889999999999964 3 57776 7877765 444444
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccc
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGI 248 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~ 248 (625)
+++||. |++..++|+++...+...|++++.++ .+|++++++.+.+. ..+++++|++++++|+||.
T Consensus 114 -------~~~gd~--vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~-~~~~~~~v~~~~v~~~tG~ 178 (385)
T TIGR01825 114 -------LRKGDI--VLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLREN-PSYGKKLIVTDGVFSMDGD 178 (385)
T ss_pred -------CCCCCE--EEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhh-ccCCCeEEEEecCCcCCCC
Confidence 468884 88899999999888888888877664 46889999888742 1136899999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEeccCcCCCcc---------ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccC
Q 043646 249 YSDTRSIARLLHQYGGFACFDFAASGPYVK---------INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLG 319 (625)
Q Consensus 249 ~~~l~~I~~la~~~g~~vivD~A~~~g~~~---------id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~ 319 (625)
+.|+++|.++|++||+++++|++++.+... +++. .+.|+++.|++|+|++++ |+++.++++. +
T Consensus 179 ~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~g--G~~~~~~~~~--~ 250 (385)
T TIGR01825 179 VAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE----DKVDIQVGTLSKAIGVVG--GYAAGHKELI--E 250 (385)
T ss_pred ccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC----cCCcEEEEeccHHhhcCC--CEEecCHHHH--H
Confidence 999999999999999999999998765432 1222 267899999999997554 7888777662 2
Q ss_pred CCCCcccCCceEEeeccccccccccccchhhhhcCC---ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC
Q 043646 320 SSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG---TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g---t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~ 396 (625)
.+.... ..+..+ .+.....+.++++.+. . ...+.++...+++++.+.|.
T Consensus 251 ~~~~~~------------------------~~~~~~~~~~~~~~~a~~~al~~~~--~--~~~~~~~~~~~~~~l~~~L~ 302 (385)
T TIGR01825 251 YLKNRA------------------------RPFLFSTAQPPAVVAALAAAVDELQ--R--SPELMERLWDNTRFFKAGLG 302 (385)
T ss_pred HHHHhC------------------------ccccccCCCCHHHHHHHHHHHHHHh--c--CHHHHHHHHHHHHHHHHHHH
Confidence 211000 001111 1222222334444431 1 12456666778889999998
Q ss_pred CCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhh
Q 043646 397 PNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476 (625)
Q Consensus 397 ~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~ 476 (625)
++ ++++..+. .+++.+..... .+..++++.|.++ ||.++++.++..+.
T Consensus 303 ~~-g~~~~~~~----~~~~~~~~~~~---------------~~~~~~~~~L~~~-gi~v~~~~~~~~~~----------- 350 (385)
T TIGR01825 303 KL-GYDTGGSE----TPITPVVIGDE---------------KAAQEFSRRLFDE-GIFAQSIVFPTVPR----------- 350 (385)
T ss_pred Hc-CCCCCCCC----CCEEEEEECCH---------------HHHHHHHHHHHHC-CcEEcccCCCCCCC-----------
Confidence 76 67766542 34554443211 1245788888775 99987544332110
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 477 ~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..+++|++++++++++|+++++++|++++++
T Consensus 351 ---------------~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 351 ---------------GTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ---------------CCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999998754
No 113
>PRK07908 hypothetical protein; Provisional
Probab=99.91 E-value=5.2e-22 Score=210.23 Aligned_cols=320 Identities=15% Similarity=0.100 Sum_probs=213.6
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
++.+.|+.+... .+|+.+.+++.+.+......|.. .-..++|+++++++|++++ +|++| +|++++|.
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----------~g~~~lr~aia~~~~~~~~-~I~it-~Ga~~al~ 89 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPST----------EDERRARAAVAARHGRTPD-EVLLL-AGAAEGFA 89 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCc----------cchHHHHHHHHHHhCcChh-hEEEC-CCHHHHHH
Confidence 456777766553 46778899888766432222221 1245688999999999876 89998 89999998
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++. + .+++ +++..+.+......++..|++++.++++.++.+|++++ . +++
T Consensus 90 ~~~~-l----------------~~~~---viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-----~~~ 140 (349)
T PRK07908 90 LLAR-L----------------RPRR---AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-----DDA 140 (349)
T ss_pred HHHh-c----------------CCCe---EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-----cCC
Confidence 8876 4 3443 55566777777777788899999999987677888744 3 468
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC--CCccccCCCCCCCCCc-EEEEcCCCCCCCCC-CceEEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG--PYVKINLRSRNIDGYD-AIFLATHKFLGGPG-TPGILL 310 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~--g~~~id~~~~~~~~~D-~v~~S~hK~lggp~-g~G~l~ 310 (625)
+++++++++||||.+.+.++|.++|+ ++.++|+|++++- ......+... +..+ +++.|++|.++.|+ .+|+++
T Consensus 141 ~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~ 217 (349)
T PRK07908 141 DLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYAL 217 (349)
T ss_pred CEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchhhccCCccccccc--cCCCEEEEeecccccCCccceeeeee
Confidence 89999999999999999999999996 4788999999752 1122233222 1123 45559999987443 379999
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY--IGYEVIKKQEDVYI 388 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~--~g~~~i~~~~~~l~ 388 (625)
+++++. +.+.+.... +..+++ . .+++..++... ...+.++++.+..+
T Consensus 218 ~~~~~~--~~~~~~~~~------------------------~~~~~~---~--~~a~~~~~~~~~~~~~~~~~~~~~~~r 266 (349)
T PRK07908 218 GAPDVL--ARLTRGRAH------------------------WPVGTL---Q--LEAIAACCAPRAVAEAAADAARLAADR 266 (349)
T ss_pred cCHHHH--HHHHhcCCC------------------------CCccHH---H--HHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 987762 222111100 011111 1 11122221110 11345677778888
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
+++.+.|.++ ++++..+. .+.+.+...++ ..++.+.| +++||.+++|..|..
T Consensus 267 ~~l~~~L~~~-~~~~~~p~----~g~~~~~~~~~-----------------~~~~~~~l-~~~gI~v~~g~~f~~----- 318 (349)
T PRK07908 267 AEMVAGLRAV-GARVVDPA----AAPFVLVRVPD-----------------AELLRKRL-RERGIAVRRGDTFPG----- 318 (349)
T ss_pred HHHHHHHHhC-CcEeccCC----CceEEEEECCc-----------------HHHHHHHH-HhCCEEEEECCCCCC-----
Confidence 8899999887 78877653 24444444331 34677777 558999998876531
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
..++++|||++ +++|+++++++|+.++..+
T Consensus 319 ----------------------~~~~~vRis~~---~~~~~~~l~~al~~~~~~~ 348 (349)
T PRK07908 319 ----------------------LDPDYLRLAVR---PRAEVPVLVQALAEILKAG 348 (349)
T ss_pred ----------------------CCCCeEEEEeC---CCccHHHHHHHHHHHHhcc
Confidence 02589999996 7899999999999887543
No 114
>PRK08363 alanine aminotransferase; Validated
Probab=99.91 E-value=1.1e-21 Score=211.45 Aligned_cols=347 Identities=12% Similarity=-0.019 Sum_probs=217.6
Q ss_pred ceEeccCCCCC----cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHH
Q 043646 77 RLTYADHTASG----RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAGTT 150 (625)
Q Consensus 77 ~~~Yld~~~~~----~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sGtt 150 (625)
+++.|..+..+ ++++.+.+++.+.+... .. .|....+..++.+.+.+++.+.+| .+++ +|++| +|++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~it-~G~~ 103 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG----HN-YYGPSEGLPELREAIVKREKRKNGVDITPD-DVRVT-AAVT 103 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC----CC-CCCCCCCcHHHHHHHHHHHHHhcCCCCChh-hEEEe-CCHH
Confidence 45566555432 46778888887766421 00 111112233444444444444445 4454 89998 7899
Q ss_pred HHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEE-ecCCC-CCCCHHHHHHHHHHh
Q 043646 151 AAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEI-GLDDN-GLLDIEALRSQLELY 228 (625)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v-~~~~~-~~ld~~~L~~~l~~~ 228 (625)
+++..++.++ +++||. |+++.++|..+...++..|++++.+ +.+++ +.+|++.|++++.
T Consensus 104 ~al~~~~~~~---------------~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-- 164 (398)
T PRK08363 104 EALQLIFGAL---------------LDPGDE--ILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-- 164 (398)
T ss_pred HHHHHHHHHh---------------CCCCCE--EEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC--
Confidence 9999988877 578885 9999999999988888889988888 55543 4689999998886
Q ss_pred hhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCcc---ccCCCCCCCCCcEEEEcCCCCCCC
Q 043646 229 KAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVK---INLRSRNIDGYDAIFLATHKFLGG 302 (625)
Q Consensus 229 ~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~~---id~~~~~~~~~D~v~~S~hK~lgg 302 (625)
++++++++++++||||.+.+ +++|+++|+++|+++++|++++.-... ..+..+....--+++.|++|+++.
T Consensus 165 ---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 241 (398)
T PRK08363 165 ---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFA 241 (398)
T ss_pred ---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCC
Confidence 57899999999999999987 788999999999999999996532111 111111111113556799999876
Q ss_pred CC-CceEEEE--eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHH
Q 043646 303 PG-TPGILLI--SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEV 379 (625)
Q Consensus 303 p~-g~G~l~v--~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~ 379 (625)
|+ ++|++++ ++.+. ..+..... . ......+...+.+.+ +..++.......+.
T Consensus 242 ~GlRiG~~~~~~~~~~~--~~l~~~~~--------------------~-~~~~~~~~s~~~q~~--~~~~l~~~~~~l~~ 296 (398)
T PRK08363 242 TGWRLGYIYFVDPEGKL--AEVREAID--------------------K-LARIRLCPNTPAQFA--AIAGLTGPMDYLEE 296 (398)
T ss_pred ccceEEEEEEeCcHHHH--HHHHHHHH--------------------H-HhcccccCChHHHHH--HHHHHhCChHHHHH
Confidence 65 5899998 44331 11100000 0 000011222222211 11121101122345
Q ss_pred HHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCC
Q 043646 380 IKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGC 459 (625)
Q Consensus 380 i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~ 459 (625)
.+++.+..++++.+.|.+++++++..+ .++.+.|...++. ...+..+++..+++++||.+++|.
T Consensus 297 ~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~~~~~~l~~~------------~~~~~~~~~~~~l~~~gV~v~~g~ 360 (398)
T PRK08363 297 YMKKLKERRDYIYKRLNEIPGISTTKP----QGAFYIFPRIEEG------------PWKDDKEFVLDVLHEAHVLFVHGS 360 (398)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEecCC----CeEEEEEEEeccC------------CCCCHHHHHHHHHHhCCEEEeCch
Confidence 566677778888899988888876554 3455655444321 001234555454466899999987
Q ss_pred CCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 460 ACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 460 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.|+.. .++++||+++ .++++++..++.|++++.+
T Consensus 361 ~f~~~---------------------------~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 361 GFGEY---------------------------GAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred hhCCC---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 66411 2489999996 4689999999999887654
No 115
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=209.37 Aligned_cols=329 Identities=13% Similarity=0.054 Sum_probs=216.0
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
...+.|+.+..+ ++|+.+.+++.+.+......+.. ...++|+.|+++++++++ +|++| +|++++|.
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-----------~~~~Lr~~ia~~~~~~~~-~I~it-~G~~~~l~ 98 (369)
T PRK08153 32 PFRARIGANESGFGPSPSVIAAMREAAAEIWKYGDP-----------ENHDLRHALAAHHGVAPE-NIMVG-EGIDGLLG 98 (369)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-----------ccHHHHHHHHHHhCCCHH-HEEEc-CCHHHHHH
Confidence 344577766544 45678888887765321111110 135689999999998776 89998 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++.++ +++||. |++..+.|+.+...+...|++++.+|.+.+ .+|++++.+.+.. +++
T Consensus 99 ~~~~~~---------------~~~gd~--vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~----~~~ 156 (369)
T PRK08153 99 LIVRLY---------------VEPGDP--VVTSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARR----ENA 156 (369)
T ss_pred HHHHHh---------------cCCCCE--EEECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcc----cCC
Confidence 998876 478885 999999999988778888999999998665 4788888777653 578
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcCCCc---cccCCCCCCCCCcEEEEcCCCCCCCCC-CceE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYV---KINLRSRNIDGYDAIFLATHKFLGGPG-TPGI 308 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~g~~---~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (625)
+++++++|+||||.+.+.+++.++++.. |+++++|++++.-.. ...+... ..-.+++.|++|.+|.|+ .+|+
T Consensus 157 ~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~ 234 (369)
T PRK08153 157 PLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTD--DPNVIRMRTFSKAYGLAGARVGY 234 (369)
T ss_pred cEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhc--CCCEEEEecchHhccCcchheee
Confidence 9999999999999999998888877654 899999999652111 1111111 112366779999998565 3899
Q ss_pred EEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 309 LLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 309 l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
++.++++. +.+.... ...+.+.+.+. ++..++ .+..-.+.+.+..+..+
T Consensus 235 ~v~~~~~~--~~l~~~~--------------------------~~~~~s~~~q~--~~~~~l-~~~~~~~~~~~~~~~~r 283 (369)
T PRK08153 235 AIGAPGTI--KAFDKVR--------------------------NHFGMNRIAQA--AALAAL-KDQAYLAEVVGKIAAAR 283 (369)
T ss_pred eecCHHHH--HHHHHhh--------------------------cCCCCCHHHHH--HHHHHh-cCHHHHHHHHHHHHHHH
Confidence 99987762 1111000 00111122211 112222 22222445566667777
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee-cCCCCCchhhH
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR-GGCACAGPYGH 467 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~-~G~~~~~~~~~ 467 (625)
+++.+.|+.. ++.++ +. .+.+.+...+.. ......+.+.|.+ +||.++ +|...
T Consensus 284 ~~~~~~L~~~-g~~~~-p~----~~~f~~~~~~~~-------------~~~a~~l~~~l~~-~Gi~v~~p~~~~------ 337 (369)
T PRK08153 284 DRIAAIARAN-GLTPL-PS----ATNFVAIDCGRD-------------GAFARAVLDGLIA-RDIFVRMPGVAP------ 337 (369)
T ss_pred HHHHHHHHHC-CCccC-CC----cCcEEEEECCCC-------------cccHHHHHHHHHH-CCeEEeeCCCCC------
Confidence 7888888765 55533 21 233433332211 1225577777754 799996 33210
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
.++++||+++ +++|+++++++|++++...++
T Consensus 338 ------------------------~~~~iRis~~---~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 338 ------------------------LDRCIRVSCG---PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred ------------------------CCCeEEEecC---CHHHHHHHHHHHHHHHHHhhc
Confidence 1479999998 799999999999998876543
No 116
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=1.3e-21 Score=226.52 Aligned_cols=371 Identities=16% Similarity=0.121 Sum_probs=248.8
Q ss_pred CCCCCCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcc-hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHH
Q 043646 43 HHPPHSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRS-LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTK 121 (625)
Q Consensus 43 ~~~~~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~-p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~ 121 (625)
..+|...+..+.++++++.---.. -...|++.+..... |+.|.+.+.+.- .+|..-+.-.-..+++..+
T Consensus 52 l~lp~~~sE~e~~~~~~~la~~N~---------~~~~~ig~G~y~~~~P~vi~~~i~~~~-~~~t~ytPyQ~EisQG~Le 121 (954)
T PRK05367 52 LDLPAALSEAEALAELRAIASKNK---------VFRSYIGQGYYGTHTPPVILRNILENP-AWYTAYTPYQPEISQGRLE 121 (954)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCC---------CCCcccCCCCCCCcCcHHHHHHHHhCc-chhhccCCCChHHHHHHHH
Confidence 455666666777777776542210 01235555444433 333445554421 1222111111224667778
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH-
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ- 200 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~- 200 (625)
...+.+..+++++|.+.. ++.++ .++|++...++.++. +.++.+..|+++...|+++...|+.
T Consensus 122 al~~~Qt~la~LtG~~~a-naSl~-d~aTAa~ea~~~a~~--------------~~~~~~~~vlv~~~~hP~~~~v~~t~ 185 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIA-NASLL-DEATAAAEAMALAKR--------------VSKSKSNRFFVDDDVHPQTLDVLRTR 185 (954)
T ss_pred HHHHHHHHHHHHHCCChh-hcccc-ccHHHHHHHHHHhhh--------------hccCCCCEEEEcCccCHHHHHHHHHH
Confidence 889999999999999987 67887 578887777776653 3443112499999999999987754
Q ss_pred ---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc
Q 043646 201 ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (625)
Q Consensus 201 ---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~ 277 (625)
.|++|+.++.+.+ ++ . +++.. ++.+..|.+|.+.|+++|+++||++|+++++|+.+.....
T Consensus 186 a~~~G~ev~~~~~~~d--~~--------~-----~~~~~-vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~ 249 (954)
T PRK05367 186 AEPLGIEVVVGDAAKA--LD--------H-----DDVFG-VLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTL 249 (954)
T ss_pred HHhCCCEEEEecCccC--CC--------c-----ccEEE-EEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccC
Confidence 5999999987542 11 1 24444 4566678999999999999999999999999997644444
Q ss_pred cccCCCCCCCCCcEEEEcCCCC-----CCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 278 KINLRSRNIDGYDAIFLATHKF-----LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
..+..++ |+|+++++.||| ||||+ .|++++++++ .+.+++...|+.. +....-......+..+...|+
T Consensus 250 l~~pge~---GaDi~vgs~qkfg~P~g~GGP~-aGflavr~~~--~r~lpgrivG~s~-d~~g~~~~~lalqtReqhiRr 322 (954)
T PRK05367 250 LTPPGEM---GADIAVGSAQRFGVPMGFGGPH-AAYFAVRDAY--KRSMPGRIVGVSV-DAAGNPALRLALQTREQHIRR 322 (954)
T ss_pred CCChhhc---CCCEEEeeCcccCCCCCCCCCC-EEEEEECHHH--HhhCCCCeeeeec-ccCCCcccccccccccccccc
Confidence 4456666 999999999999 78884 8999999988 5567777666532 110000001112233445678
Q ss_pred cCCChhHHHH--HHHHHHH---HHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCC
Q 043646 353 NGGTPQIVQM--IRAALAF---WVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427 (625)
Q Consensus 353 ~~gt~~~~~~--~~aal~~---~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~ 427 (625)
+.+|.|++.. +.+.++. ......|.++|.++.+.++.++.++|.. .|+++..+. ...++++.+ +
T Consensus 323 ekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~---~f~~~~~~~-~------ 391 (954)
T PRK05367 323 EKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDS---FFDTLTVEV-G------ 391 (954)
T ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCC---CCCeEEEeC-C------
Confidence 8999887642 1121211 2235679999999999999999999977 588876542 335555553 1
Q ss_pred ccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 428 ~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
.+..++.+.|.+ +||.++.- .++.+|||++.++|++
T Consensus 392 ----------~~~~~i~~~l~~-~gi~~~~~---------------------------------~~~~l~is~~e~~t~~ 427 (954)
T PRK05367 392 ----------GDAAAVLARALA-AGINLRRV---------------------------------DDDHVGISLDETTTRE 427 (954)
T ss_pred ----------CCHHHHHHHHHH-CCceeccc---------------------------------cCCEEEEEecccCCHH
Confidence 135689999965 69988521 1367999999999999
Q ss_pred HHHHHHHHHH
Q 043646 508 EFEFILAALE 517 (625)
Q Consensus 508 did~ll~aL~ 517 (625)
||++++++|.
T Consensus 428 did~l~~~l~ 437 (954)
T PRK05367 428 DLAALLAVFG 437 (954)
T ss_pred HHHHHHHHHc
Confidence 9999999997
No 117
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.91 E-value=1.5e-21 Score=209.16 Aligned_cols=340 Identities=14% Similarity=0.032 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
..++++.+++++|.+. .++++ + +++++..++.+++ +++||+ |++++++|.+...++...|
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~-s-gt~al~~~l~al~--------------~~~Gd~--Viv~~~~~~~~~~~~~~~G 90 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFN-S-ATSALHIACLALG--------------VGPGDR--VWTTPITFVATANCALYCG 90 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEc-C-HHHHHHHHHHHcC--------------CCCCCE--EEeCCcchHHHHHHHHHcC
Confidence 5678999999999852 35554 4 4667888887763 578886 9999999999988888899
Q ss_pred CeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccC
Q 043646 203 AEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINL 281 (625)
Q Consensus 203 ~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~ 281 (625)
++++.+++++ ++.+|++++++++++. ..+++++|++++ ++|...|+++|.++|++||+++|+|++|+.|.. ++.
T Consensus 91 ~~~~~~~~~~~~~~~d~~~l~~~i~~~-~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~-~~~ 165 (380)
T TIGR03588 91 AKVDFVDIDPDTGNIDEDALEKKLAAA-KGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAE-YGG 165 (380)
T ss_pred CEEEEEecCCCcCCcCHHHHHHHhhcc-cCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCc-cCC
Confidence 9999999975 6789999999999731 113688887654 689999999999999999999999999999875 454
Q ss_pred CCCCC-CCCcEEEEcCC--CCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC---C
Q 043646 282 RSRNI-DGYDAIFLATH--KFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG---G 355 (625)
Q Consensus 282 ~~~~~-~~~D~v~~S~h--K~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~---g 355 (625)
+.++. ...|+.++|+| |+++.+.| |+++.+++.. .+.+++...+|....... ..........++. |
T Consensus 166 ~~~g~~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~-~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~g 237 (380)
T TIGR03588 166 KPVGNCRYADATVFSFHPVKIITTAEG-GAVTTNDEEL-AERMRLLRSHGITKDPLL------FEKQDEGPWYYEQQELG 237 (380)
T ss_pred EeCCCccccceEEEecCCCCcccccCc-eEEEECCHHH-HHHHHHHHHCCCCCCccc------ccccccCcceeeeeccc
Confidence 44411 12399999988 99976665 6666654431 122222221111100000 0000000011111 1
Q ss_pred ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 356 TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 356 t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
...-+.-+.+++... +....+.+.++.+++++++.+.|.+++++.++.+..........+.+.-.. .
T Consensus 238 ~n~~m~~l~aa~g~~--qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------~ 304 (380)
T TIGR03588 238 FNYRMTDIQAALGLS--QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQ-----------E 304 (380)
T ss_pred cccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECC-----------c
Confidence 110011112222222 112257788888999999999999998877654421111122222221110 0
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCc--hhhHhhhc-CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAG--PYGHTLLA-FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFI 512 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~--~~~~~~l~-~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~l 512 (625)
.+.+..++.+.|. +.||.++..+.+.. |+.....+ .+-+.+..+ ....++++++...|++|++++
T Consensus 305 ~~~~r~~l~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~-----------~~~~l~lP~~~~l~~~dv~~i 372 (380)
T TIGR03588 305 FGCTRKEVFEALR-AAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENF-----------YLAEISLPLHPALTLEQQQRV 372 (380)
T ss_pred CCCCHHHHHHHHH-HCCCCcccCCcccccChhhhccCCcCCCcHHHHH-----------HhceEEcCCCCCCCHHHHHHH
Confidence 1245778999995 57999987654321 11111000 011112211 247899999999999999999
Q ss_pred HHHHHHHH
Q 043646 513 LAALEFIA 520 (625)
Q Consensus 513 l~aL~~~~ 520 (625)
+++|++++
T Consensus 373 ~~~l~~~~ 380 (380)
T TIGR03588 373 VETLRKVL 380 (380)
T ss_pred HHHHHHhC
Confidence 99999763
No 118
>PRK08068 transaminase; Reviewed
Probab=99.91 E-value=3.2e-21 Score=207.28 Aligned_cols=338 Identities=10% Similarity=0.060 Sum_probs=213.4
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal 153 (625)
..+.|+.+... +.++.+.+++.+.+... ....|....+..++.+++.+++.+.+|. +++++|++| +|+++++
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it-~G~~~~l 107 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENP----ANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAIL-FGGKAGL 107 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEc-CCcHHHH
Confidence 34555544323 34567788887766421 1111211122345555555555555564 333268887 7888888
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAA 231 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~ 231 (625)
..++.++ +++||. |+++.+.|+.+...++..|++++.++++. +..+|++++++++.
T Consensus 108 ~~~~~~~---------------~~~gd~--vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~----- 165 (389)
T PRK08068 108 VELPQCL---------------MNPGDT--ILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA----- 165 (389)
T ss_pred HHHHHHh---------------CCCCCE--EEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-----
Confidence 8887776 478885 99999999999888888999999999975 34689999998886
Q ss_pred CCCeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcC-CC---ccccCCCC-CCCCCcEEEEcCCCCCCCC
Q 043646 232 KRPMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASG-PY---VKINLRSR-NIDGYDAIFLATHKFLGGP 303 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~-g~---~~id~~~~-~~~~~D~v~~S~hK~lggp 303 (625)
.++++|++++|+||||.+.+. ++|+++|++|++++++|++++. .+ .+..+... +.....+++.|++|.||.|
T Consensus 166 ~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~ 245 (389)
T PRK08068 166 EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA 245 (389)
T ss_pred ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc
Confidence 478999999999999999886 5778889999999999999642 11 11111111 1112347778999999866
Q ss_pred C-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHH
Q 043646 304 G-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKK 382 (625)
Q Consensus 304 ~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~ 382 (625)
+ .+|+++.++++. +.+... ......++++..+. ++..++.....-.+..++
T Consensus 246 GlRiG~~~~~~~l~--~~l~~~------------------------~~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~ 297 (389)
T PRK08068 246 GWRVAFAVGNESVI--EAINLL------------------------QDHLFVSLFGAIQD--AAIEALLSDQSCVAELVA 297 (389)
T ss_pred cceeEeEecCHHHH--HHHHHH------------------------HhhccCCCChHHHH--HHHHHHhCcHHHHHHHHH
Confidence 5 489999887762 221100 01111233332222 222333211122345566
Q ss_pred HHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC
Q 043646 383 QEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA 462 (625)
Q Consensus 383 ~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~ 462 (625)
+.+..++++.+.|.++ ++.+..+ .++.+.+...++ .++..++++.|.+++||.+++|..|+
T Consensus 298 ~~~~~r~~~~~~L~~~-g~~~~~~----~g~~~~~v~~~~--------------~~~~~~~~~~l~~~~gi~v~pg~~f~ 358 (389)
T PRK08068 298 RYESRRNAFISACREI-GWEVDAP----KGSFFAWMPVPK--------------GYTSEQFADLLLEKAHVAVAPGNGFG 358 (389)
T ss_pred HHHHHHHHHHHHHHHC-CCcccCC----CeeEEEEEECCC--------------CCCHHHHHHHHHHhCCEEEecchHhC
Confidence 6777788888888776 6665543 234444444332 13467888988776899999887653
Q ss_pred chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 463 GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 463 ~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
.. .++++||+++. .++.+...++.|+
T Consensus 359 ~~---------------------------~~~~iRi~~~~--~~~~l~~al~~l~ 384 (389)
T PRK08068 359 EH---------------------------GEGYVRVGLLT--DEERLREAVERIG 384 (389)
T ss_pred cc---------------------------CCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 10 24799999973 4555555555544
No 119
>PLN02187 rooty/superroot1
Probab=99.91 E-value=3.6e-21 Score=210.41 Aligned_cols=350 Identities=13% Similarity=0.051 Sum_probs=221.4
Q ss_pred CCceEeccCCCC-----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCC
Q 043646 75 KRRLTYADHTAS-----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGA 147 (625)
Q Consensus 75 ~~~~~Yld~~~~-----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~s 147 (625)
.+.+++|.++-. .+.|+.+.+++.+.+..- ... .|....+..++.+.+.+++.+.++ ++++ +|++| +
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~---~~~-~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~-~I~it-~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSG---KGN-SYGPGAGILPARRAVADYMNRDLPHKLTPE-DIFLT-A 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCC---CCC-CCCCCCChHHHHHHHHHHHHHhcCCCCCcc-cEEEe-C
Confidence 367899988743 234577888888776421 111 121222233344444444433333 4555 89998 8
Q ss_pred hHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHH
Q 043646 148 GTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQL 225 (625)
Q Consensus 148 Gttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l 225 (625)
|++++|..++.++ ++|||+ |+++.+.|+.+....+..|++++.+++.+ ++.+|+++|++++
T Consensus 139 G~~~al~~~~~~l---------------~~pGd~--Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~ 201 (462)
T PLN02187 139 GCNQGIEIVFESL---------------ARPNAN--ILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIA 201 (462)
T ss_pred CHHHHHHHHHHHh---------------cCCCCE--EEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhc
Confidence 9999999999887 578986 99999999988777888899999998853 5689999999888
Q ss_pred HHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEcCCC
Q 043646 226 ELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLATHK 298 (625)
Q Consensus 226 ~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S~hK 298 (625)
+ ++++++++++|+||||.+.+ +++|+++|++||+++|+|++++--. ....+..+.....-+++.|++|
T Consensus 202 ~-----~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK 276 (462)
T PLN02187 202 D-----ENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISK 276 (462)
T ss_pred C-----CCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchh
Confidence 6 57899999999999999987 7788999999999999999965311 1112222211112356679999
Q ss_pred CCCCCC-CceEEEEec-c-ccc-cCCCCCcccCCceEEeeccccccccccccchhhhhcC--CChhHHHHHHHHHHHHHH
Q 043646 299 FLGGPG-TPGILLISK-A-LYQ-LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG--GTPQIVQMIRAALAFWVK 372 (625)
Q Consensus 299 ~lggp~-g~G~l~v~~-~-~~~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~--gt~~~~~~~~aal~~~~~ 372 (625)
.|+.|+ .+|++++.+ + ... ...+... ...... +.+.+.+ .++..++.
T Consensus 277 ~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~Q---~a~~~~L~ 329 (462)
T PLN02187 277 GWVVPGWKIGWIALNDPEGVFETTKVLQSI------------------------KQNLDVTPDPATIIQ---AALPAILE 329 (462)
T ss_pred hcCCccceeEEEEecCchhHHHHHHHHHHH------------------------HHhccccCCCCHHHH---HHHHHHHh
Confidence 998776 389999843 2 100 0001000 000111 1122222 22222221
Q ss_pred h--hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEe-CCCCCCCcceEEEEeccCCCCCCccccccCCCCC-ChHHHHHHhh
Q 043646 373 E--YIGYEVIKKQEDVYIESALGRILPNQNIQVL-GNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL-HGPFVATLFN 448 (625)
Q Consensus 373 ~--~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~-~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l-~~~~v~~~L~ 448 (625)
+ ..-.+.+++..++.++++.+.|++++++... .| .++.+.|.-.+... ..++ +..+++..+.
T Consensus 330 ~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P----~gg~fl~~~l~~~~----------~~~~~~~~~~~~~ll 395 (462)
T PLN02187 330 KADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKP----ESCTYLLTKLELSL----------MDNIKDDIDFCVKLA 395 (462)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCC----CEeEEEEeecChhh----------CCCCCCHHHHHHHHH
Confidence 1 1224455666677788888999887654322 22 33555555332100 0011 2445655555
Q ss_pred hhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 449 DLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 449 ~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
.++||.+++|..|+ .++++||+++. .++.++..++.|.++++...
T Consensus 396 ~~~gV~v~pG~~fg-----------------------------~~~~iRis~~~--~~e~l~~al~rL~~~l~~~~ 440 (462)
T PLN02187 396 REENLVFLPGDALG-----------------------------LKNWMRITIGV--EAHMLEDALERLKGFCTRHA 440 (462)
T ss_pred hhCCEEEECccccC-----------------------------CCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhh
Confidence 67899999988664 14899999983 68889999999998886543
No 120
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.90 E-value=1.8e-21 Score=210.71 Aligned_cols=345 Identities=13% Similarity=0.037 Sum_probs=218.8
Q ss_pred ceEeccCCCCC-----cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--------CCCCCcEE
Q 043646 77 RLTYADHTASG-----RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--------GGQADAII 143 (625)
Q Consensus 77 ~~~Yld~~~~~-----~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--------~~~~~~vi 143 (625)
+.+-|..+... .+++.+.+++.+.+.. .....|....+..++.+.+.+++.+.++ .+++ +|+
T Consensus 34 ~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-~i~ 108 (412)
T PTZ00433 34 SIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS----QECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD-NVV 108 (412)
T ss_pred CeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc----CCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh-hEE
Confidence 45555544432 3577888888776642 1111121111233444444444443322 3444 899
Q ss_pred EeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHH
Q 043646 144 FCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEAL 221 (625)
Q Consensus 144 ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L 221 (625)
+| +|++++|..++.++ +++||+ |+++.++|+.+...++..|++++.++++. ++.+|+++|
T Consensus 109 it-~G~~~al~~~~~~~---------------~~~gd~--vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l 170 (412)
T PTZ00433 109 LC-SGVSHAILMALTAL---------------CDEGDN--ILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEI 170 (412)
T ss_pred Ee-CChHHHHHHHHHHh---------------cCCCCE--EEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHH
Confidence 98 89999999998887 478885 99999999999888889999999999864 458999999
Q ss_pred HHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc----cccCCCCCCCCCcEEEE
Q 043646 222 RSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----KINLRSRNIDGYDAIFL 294 (625)
Q Consensus 222 ~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~~~~~~~D~v~~ 294 (625)
++++. +++++|++++++||||.+.+ +++|+++|+++|+++++|+++..-.. ...+..+.....-+++.
T Consensus 171 ~~~~~-----~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 245 (412)
T PTZ00433 171 RRLVD-----DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILG 245 (412)
T ss_pred HHHhc-----cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEc
Confidence 98887 47899999999999999876 67778999999999999999652111 01111221111235667
Q ss_pred cCCCCCCCCC-CceEEEEec------cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHH
Q 043646 295 ATHKFLGGPG-TPGILLISK------ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAAL 367 (625)
Q Consensus 295 S~hK~lggp~-g~G~l~v~~------~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal 367 (625)
|++|.||.|+ .+|++++.. ++ +..+.. ......+.+.+.+. ++.
T Consensus 246 SfSK~~~~pGlRlG~~i~~~p~~~~~~~--~~~~~~-------------------------~~~~~~~~~~~~q~--a~~ 296 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVDPHGNGGDF--LDGMKR-------------------------LGMLVCGPCSVVQA--ALG 296 (412)
T ss_pred cchhhcCCCCeeEEEEEEeCCcccHHHH--HHHHHH-------------------------HhhccCCCChHHHH--HHH
Confidence 9999997675 489999731 12 111100 00001123333332 122
Q ss_pred HHHHHh-hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHH
Q 043646 368 AFWVKE-YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATL 446 (625)
Q Consensus 368 ~~~~~~-~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~ 446 (625)
.++... ..-.+.++++.+..++.+.+.|.+..++.+..+ .++.+.+...+... -....+..++++.
T Consensus 297 ~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~gg~f~~~~l~~~~---------~~~~~~~~~~~~~ 363 (412)
T PTZ00433 297 EALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMP----RGSMFLMSRLDLEK---------FRDIKSDVEFYEK 363 (412)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CeeEEEEEEechhh---------cCCCCCHHHHHHH
Confidence 222111 112445666677778888888887666665544 34555554443200 0000134578888
Q ss_pred hhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 447 FNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 447 L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
|.+++||.+++|..|+ .++++||+++. .+++++..++.|.+++..
T Consensus 364 ll~~~gV~v~pg~~f~-----------------------------~~~~iRis~~~--~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 364 LLEEENVQVLPGEIFH-----------------------------MPGFTRLTISR--PVEVLREAVERIKAFCER 408 (412)
T ss_pred HHHhcCEEEeCccccC-----------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 8766899999987664 14899999984 578899999999888764
No 121
>PRK08912 hypothetical protein; Provisional
Probab=99.90 E-value=1.9e-21 Score=208.86 Aligned_cols=334 Identities=12% Similarity=0.005 Sum_probs=217.4
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
.|+.+.+++.+.+... .. .|....+..++.+.+.+++.+.+|.+ ++++|++| +|++.++..++..+
T Consensus 40 ~p~~~~~~~~~~~~~~----~~-~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~~------ 107 (387)
T PRK08912 40 GPEDVRRAAADALLDG----SN-QYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVT-SGATEALAAALLAL------ 107 (387)
T ss_pred CCHHHHHHHHHHHhcC----CC-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEe-CCcHHHHHHHHHHh------
Confidence 3566777776655321 11 12222234556666666666666653 33378998 78888898887776
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~ 245 (625)
+++||+ |+++.+.|+.+...++..|++++.++++. ++.+|+++|++++. ++++++++++++||
T Consensus 108 ---------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~l~~p~NP 171 (387)
T PRK08912 108 ---------VEPGDE--VVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-----PRTKAVLLNNPLNP 171 (387)
T ss_pred ---------cCCCCE--EEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-----ccceEEEEeCCCCC
Confidence 578885 99999999998888888999999999875 56899999999886 57899999999999
Q ss_pred cccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEecccc
Q 043646 246 TGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALY 316 (625)
Q Consensus 246 TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~ 316 (625)
||.+.+ +++|.++|++||+++|+|++++... ....+... +....++++.|++|.||.|+ .+|++++++++.
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~ 251 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLL 251 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHH
Confidence 999987 6678999999999999999965211 11111111 11134688899999998443 389999987762
Q ss_pred ccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC
Q 043646 317 QLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~ 396 (625)
+.+.... .....++++..+. ++...+.....-.+.++++.+..++++.+.|.
T Consensus 252 --~~l~~~~------------------------~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 303 (387)
T PRK08912 252 --RVLAKAH------------------------QFLTFTTPPNLQA--AVAYGLGKPDDYFEGMRADLARSRDRLAAGLR 303 (387)
T ss_pred --HHHHHHH------------------------hhccccCChHHHH--HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211000 0001122222221 11111111111234566777777888889998
Q ss_pred CCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhh
Q 043646 397 PNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476 (625)
Q Consensus 397 ~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~ 476 (625)
.. ++++..+. ++.+.+...+.. +...+..++++.|.+++||.+.+|..|.... .
T Consensus 304 ~~-g~~~~~~~----g~~~l~~~l~~~-----------~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~-~--------- 357 (387)
T PRK08912 304 RI-GFPVLPSQ----GTYFLTVDLAPL-----------GLAEDDVAFCRRLVEEAGVAAIPVSAFYEED-P--------- 357 (387)
T ss_pred hC-CCcccCCC----cceEEEeccccc-----------CCCCCHHHHHHHHHhcCCEEEecchhhCCCC-C---------
Confidence 86 67766542 344444433320 0123456788887667899999887653110 0
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 477 ~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++||+++. .+++++..++.|++++.
T Consensus 358 ---------------~~~~iRl~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 358 ---------------VTSVVRFCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred ---------------CCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 24899999985 57888888888887654
No 122
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=9.3e-22 Score=210.97 Aligned_cols=340 Identities=10% Similarity=-0.006 Sum_probs=220.3
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~ 154 (625)
.+.|+.+... ++++.+.+++.+.+.. ... .|....+..++.+.+++++++++|.+ ++++|++| +|+++++.
T Consensus 31 ~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it-~g~~~al~ 104 (384)
T PRK12414 31 ALNLSQGAPNFAPDPALVEGVARAMRD----GHN-QYAPMAGIAALREALAEKTERLYGARYDPASEVTVI-ASASEGLY 104 (384)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHHh----CCC-CcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEE-CChHHHHH
Confidence 4555554333 3467788887765532 111 12222335677888999999998985 33379998 78888899
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~ 233 (625)
.++.++ +++||+ |+++.++|..+...++..|++++.++++. ++.+|++.|+++++ ++
T Consensus 105 ~~~~~l---------------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----~~ 162 (384)
T PRK12414 105 AAISAL---------------VHPGDE--VIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-----PR 162 (384)
T ss_pred HHHHHh---------------cCCCCE--EEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-----cc
Confidence 888876 578886 88899999888777888899999999875 55799999999887 57
Q ss_pred CeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCCCCCCC-
Q 043646 234 PMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKFLGGPG- 304 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~lggp~- 304 (625)
+++|++++++||||.+.+ +++|+++|++||+++++|+++..-. ....+.... ..+-.+++.|++|.||.|+
T Consensus 163 ~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl 242 (384)
T PRK12414 163 TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW 242 (384)
T ss_pred cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc
Confidence 999999999999999854 7788999999999999999965311 111121110 0122477889999997564
Q ss_pred CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHH
Q 043646 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQE 384 (625)
Q Consensus 305 g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~ 384 (625)
.+|++++++++. ..+.... .....+++.+.+. ++..++ .+......+.+..
T Consensus 243 RiG~~v~~~~l~--~~l~~~~------------------------~~~~~~~s~~~q~--a~~~~l-~~~~~~~~~~~~~ 293 (384)
T PRK12414 243 RVGYCLAPAELM--DEIRKVH------------------------QFMVFSADTPMQH--AFAEAL-AEPASYLGLGAFY 293 (384)
T ss_pred eEEEEecCHHHH--HHHHHHH------------------------hheecCCCcHHHH--HHHHHh-cCChHHHHHHHHH
Confidence 489999988762 2211100 0001122222222 112222 1211223455566
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 385 DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
++.++++.+.|.+. ++++..+ .++.+.|...+.. ......+++..+++++||.+.+|..|...
T Consensus 294 ~~~r~~l~~~L~~~-g~~~~~~----~gg~~~~~~~~~~------------~~~~~~~~~~~~l~~~gV~v~pg~~f~~~ 356 (384)
T PRK12414 294 QRKRDLLARELAGS-RFELLPS----EGSFFMLARFRHF------------SDESDSDFVLRLIRDARVATIPLSAFYTD 356 (384)
T ss_pred HHHHHHHHHHHHhC-CCeecCC----CcceEEEEccccc------------CCCCHHHHHHHHHHhCCEEEecchhhcCC
Confidence 67788888888876 6776544 2455555333210 01123456655556689999998766411
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
+...+++||+++. ++++++..++.|.+
T Consensus 357 -------------------------~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 357 -------------------------GTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred -------------------------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 0124899999984 67888888877753
No 123
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=2.6e-21 Score=210.68 Aligned_cols=352 Identities=16% Similarity=0.151 Sum_probs=224.2
Q ss_pred CcchHHHHHHHHHhhCCCCC--CCCCCcchhhHHH-HHHHHHHHHHHHHHhCCCCCCcEEE---eCChHHHHHHHHHHHh
Q 043646 87 GRSLRYIEDYIINNVLPFYG--NTHTSDSYVGQRM-TKMVHEASNYIKRCLGGGQADAIIF---CGAGTTAAIKRLQEVM 160 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~--n~~~~~~~~~~~~-~~~~~~~~~~ia~~~g~~~~~~vif---t~sGttaal~~l~~~l 160 (625)
...++.|.+++...+...|+ .|+.. +..|... .++.+.++++.+++|++..+ .+++ ..+|+.+++..+...
T Consensus 44 n~~s~~v~~a~~s~~~~ky~~G~~g~r-~~~G~~~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~SG~~AN~av~~aL- 120 (475)
T PLN03226 44 NFTSRAVMEALGSCLTNKYSEGLPGAR-YYGGNEYIDQIETLCQKRALEAFRLDPE-KWGVNVQPLSGSPANFAVYTAL- 120 (475)
T ss_pred ccCCHHHHHHHhhHHhccccCCCCCCc-CcCCChhHHHHHHHHHHHHHHHhCCCcc-eeEEecCcCchHHHHHHHHHHh-
Confidence 34566888888888744333 33332 3333333 34445566778899998876 4545 137888877665443
Q ss_pred cccccchhhhhhhhccCCCCceEEEEcC------CCCchhHHHHHHcCCeEE----EEecC-CCCCCCHHHHHHHHHHhh
Q 043646 161 GITVPSIMRDKLITSLRDEERWVVFLGP------YEHHSNLLSWRQSLAEVV----EIGLD-DNGLLDIEALRSQLELYK 229 (625)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~------~~h~s~~~~~~~~G~~vv----~v~~~-~~~~ld~~~L~~~l~~~~ 229 (625)
++|||+ |+..+ ..|.+.....+..+..+. .++++ .++.+|+++|++++.+
T Consensus 121 ---------------~~pgD~--Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~-- 181 (475)
T PLN03226 121 ---------------LQPHDR--IMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAML-- 181 (475)
T ss_pred ---------------CCCCCE--EEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhh--
Confidence 478986 77744 333333322222223222 33444 3689999999999874
Q ss_pred hCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEE
Q 043646 230 AAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGIL 309 (625)
Q Consensus 230 ~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l 309 (625)
.++++|++. .+.+|...|+++|.++|+++|+++++|+||++|....+......+++|++++++||||+||.| |++
T Consensus 182 --~~pklIv~~--~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I 256 (475)
T PLN03226 182 --FRPKLIIAG--ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMI 256 (475)
T ss_pred --cCCeEEEEe--cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEE
Confidence 467876553 235789999999999999999999999999999988776543334799999999999988998 899
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccc-hhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED-IEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDV 386 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~-~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~ 386 (625)
+++++. ..... +| ...+.. + ...... ....+ .|+|++..++ .+++.++ ...+.+.+.++...
T Consensus 257 ~~~~~~--~~~~~----~g-~~~~~d-~----~~~i~~a~~~~~-~g~p~~~~iaal~aAl~~i--~~~~~~~~~~~~~~ 321 (475)
T PLN03226 257 FFRKGP--KPPKG----QG-EGAVYD-Y----EDKINFAVFPGL-QGGPHNHTIAALAVALKQA--MTPEFKAYQKQVKA 321 (475)
T ss_pred EEchhh--ccccc----CC-CccHHH-H----HHHhccccCCcc-CCCchHHHHHHHHHHHHHH--hCcCHHHHHHHHHH
Confidence 988775 22221 11 100000 0 000000 00112 3456555554 3445544 45678888999999
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG 466 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~ 466 (625)
+++++.+.|.+ .|++++++... ..++.+.+.+ .++++.++.+.| ++.||.+..+.-+...
T Consensus 322 na~~L~~~L~~-~G~~l~~~~t~--~hi~lv~~~~--------------~gi~~~~~~~~L-~~~~I~~nk~~~p~~~-- 381 (475)
T PLN03226 322 NAAALANRLMS-KGYKLVTGGTD--NHLVLWDLRP--------------LGLTGSRVEKVL-DLAHITLNKNAVPGDS-- 381 (475)
T ss_pred HHHHHHHHHHh-CCCEEEcCCCC--CCEEEEEccC--------------CCCCHHHHHHHH-HHCCCEECCCCCCCCc--
Confidence 99999999988 49999875322 2333332222 235677788888 5689998766532210
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe----cCCCCCHHHHHHHHHHHHHHHHh
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT----FPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis----~~~~~t~edid~ll~aL~~~~~~ 522 (625)
. ...+..+|+. ...-++++|++++.+.|.+++..
T Consensus 382 ~----------------------~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 382 S----------------------ALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred c----------------------cCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0134568883 34567899999999999998875
No 124
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.90 E-value=1.3e-21 Score=210.24 Aligned_cols=342 Identities=11% Similarity=0.019 Sum_probs=217.1
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal 153 (625)
..+.|+.+... ++++.+.+++.+.+.. +....|....+..++.+.+.+++.+..|. +++++|++| +|++++|
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it-~Gs~~al 105 (388)
T PRK07366 31 ELIDLSLGSSDLPAPAHALEAIAQSLHD----PSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPL-IGSQEGT 105 (388)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhC----cccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEEC-CCcHHHH
Confidence 35555544433 3467888888776532 11111211122344555555555555564 444258877 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAA 231 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~ 231 (625)
..++.++ +++||+ |++..+.|+.+...++..|++++.++++.+ ..+|++++++.+.
T Consensus 106 ~~~~~~l---------------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----- 163 (388)
T PRK07366 106 AHLPLAV---------------LNPGDF--ALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL----- 163 (388)
T ss_pred HHHHHHh---------------CCCCCE--EEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-----
Confidence 9998887 578886 999999999998888889999999999753 3678888887775
Q ss_pred CCCeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCC----c-cccCCCCCCCC-CcEEEEcCCCCCCC
Q 043646 232 KRPMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----V-KINLRSRNIDG-YDAIFLATHKFLGG 302 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~----~-~id~~~~~~~~-~D~v~~S~hK~lgg 302 (625)
++++++++++++||||.+.+. ++|+++|++||+++++|+++.--. . ...+....... .-+++.|++|.+|.
T Consensus 164 ~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 243 (388)
T PRK07366 164 AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNM 243 (388)
T ss_pred ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 478999999999999999875 567778999999999999965211 1 11122211111 23567799999986
Q ss_pred CC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHH
Q 043646 303 PG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIK 381 (625)
Q Consensus 303 p~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~ 381 (625)
|+ .+|+++.++++. +.+.... .....++++.. ..+++..+.....-.+.++
T Consensus 244 ~GlRiG~~v~~~~li--~~l~~~~------------------------~~~~~~~~~~~--~~~a~~~l~~~~~~l~~~~ 295 (388)
T PRK07366 244 GGFRIGFAIGNAQLI--QALRQVK------------------------AVVDFNQYRGI--LNGAIAALTGPQATVQQTV 295 (388)
T ss_pred cchhheehcCCHHHH--HHHHHHH------------------------hhcccCCCHHH--HHHHHHHHhCcHHHHHHHH
Confidence 65 489999887762 2221100 00111221211 1222222211112244566
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCC
Q 043646 382 KQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCAC 461 (625)
Q Consensus 382 ~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~ 461 (625)
++.+..++++.+.|.++ ++.+..+ .++.+.|.-.++. ...+..++++.|.+++||.+++|..|
T Consensus 296 ~~~~~~r~~l~~~L~~~-~~~~~~p----~~g~f~~~~~~~~------------~~~~~~~~~~~l~~~~gv~v~pg~~f 358 (388)
T PRK07366 296 QIFRQRRDAFINALHQI-GWPVPLP----EATMYVWAKLPEP------------WQGNSVEFCTQLVAQTGVAASPGSGF 358 (388)
T ss_pred HHHHHHHHHHHHHHHHC-CCcccCC----CeeEEEEEECCcc------------cCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 66777788888888776 5554433 3455555554421 01124567777766789999998766
Q ss_pred CchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 462 AGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 462 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
+.. .++++||+++. ++++++..++.|+++
T Consensus 359 ~~~---------------------------~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 359 GKS---------------------------GEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CcC---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 311 24899999973 688999998888764
No 125
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.90 E-value=3e-21 Score=207.52 Aligned_cols=343 Identities=13% Similarity=0.074 Sum_probs=218.5
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~ 154 (625)
.+.|..+... ..++.+.+++.+.+..... .|....+..++.+.+.+++.+.+|.. ++++|++| +|+++++.
T Consensus 32 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it-~G~~~al~ 105 (391)
T PRK07309 32 ILKLTLGEPDFTTPDHVKEAAKRAIDANQS-----HYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVT-IGATEALS 105 (391)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-----CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CChHHHHH
Confidence 4444433332 2356677777766532110 11111123455555666665555553 33479998 78999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC-CCCCHHHHHHHHHHhhhCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN-GLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~~ 233 (625)
.++..+ +++||+ |++..+.|..+...++..|++++.++.+.+ ..+|++.|++++++. .++
T Consensus 106 ~~~~~~---------------~~~gd~--vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~ 166 (391)
T PRK07309 106 ASLTAI---------------LEPGDK--VLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQ--GDK 166 (391)
T ss_pred HHHHHh---------------cCCCCE--EEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhcc--CCC
Confidence 988876 578885 888889999888888889999999998764 478999999998731 136
Q ss_pred CeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc----cccCCCCCCCCCcEEEEcCCCCCCCCC-C
Q 043646 234 PMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----KINLRSRNIDGYDAIFLATHKFLGGPG-T 305 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g 305 (625)
++++++++|+||||.+.+ +++|+++|++||+++++|++++.-.. ..++..... .-.+++.|++|.||.|+ .
T Consensus 167 ~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlR 245 (391)
T PRK07309 167 LKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILINGLSKSHAMTGWR 245 (391)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEecChhhccCccce
Confidence 899999999999999876 78889999999999999999763221 112211111 22367789999998664 3
Q ss_pred ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc-CCChhHHHHHHHHHHHHHHhh-cCHHHHHHH
Q 043646 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN-GGTPQIVQMIRAALAFWVKEY-IGYEVIKKQ 383 (625)
Q Consensus 306 ~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~aal~~~~~~~-~g~~~i~~~ 383 (625)
+|+++.++++. +.+... ..+. .+++.+.+. ++..++ .+. .-....+++
T Consensus 246 vG~~v~~~~~~--~~~~~~-------------------------~~~~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~~~ 295 (391)
T PRK07309 246 IGLIFAPAEFT--AQLIKS-------------------------HQYLVTAATTMAQF--AAVEAL-TNGKDDALPMKKE 295 (391)
T ss_pred eEEEEeCHHHH--HHHHHH-------------------------HhhcccCCChHHHH--HHHHHH-hCChhHHHHHHHH
Confidence 89999988873 221100 0011 112222221 222222 121 112234455
Q ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 384 EDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
.++.++++.+.|.+. ++++..+. ++.+.+...+.. ...+..++++.|.++.||.+.+|..+..
T Consensus 296 ~~~~~~~~~~~l~~~-~~~~~~p~----gg~~~~~~l~~~------------~~~~~~~~~~~l~~~~gv~v~pg~~f~~ 358 (391)
T PRK07309 296 YIKRRDYIIEKMTDL-GFKIIKPD----GAFYIFAKIPAG------------YNQDSFKFLQDFARKKAVAFIPGAAFGP 358 (391)
T ss_pred HHHHHHHHHHHHHHC-CCeecCCC----eeEEEEEECCCC------------CCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 566677888888876 67766553 344444333321 1123457787666668999998876531
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
. .++++||+++. +.++++..+++|++++++
T Consensus 359 ~---------------------------~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 359 Y---------------------------GEGYVRLSYAA--SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred C---------------------------CCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 1 24899999974 678999999999988755
No 126
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.90 E-value=1.1e-20 Score=208.65 Aligned_cols=427 Identities=16% Similarity=0.122 Sum_probs=265.2
Q ss_pred CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHH
Q 043646 49 KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASN 128 (625)
Q Consensus 49 ~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~ 128 (625)
.+.++.++++.+.+......+.+| | + |+.|-.+.+.++.++..+...+ -|++...+..++.++.+.+++.+
T Consensus 60 ~~~~~~l~~l~~~l~~~sv~~~~P-~-r---y~ghm~~~~~~paila~~~a~~----~N~n~~~~e~SP~~t~lE~~vi~ 130 (608)
T TIGR03811 60 NNMKDVLDELSSRLRTESVPWHSA-G-R---YWGHMNSETLMPAILAYNYAML----WNGNNVAYESSPATSQMEEEVGK 130 (608)
T ss_pred cCHHHHHHHHHHHHhcCCCCCCCc-c-c---eEEECcCCCCHHHHHHHHHHHH----hCCCCCccccCchHHHHHHHHHH
Confidence 457888888888775443333332 1 2 6666666777777776665544 36665566678889999999999
Q ss_pred HHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccc-ccchhhh---h-------------------------------hh
Q 043646 129 YIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGIT-VPSIMRD---K-------------------------------LI 173 (625)
Q Consensus 129 ~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~-~~~~~~~---~-------------------------------~~ 173 (625)
++++++|.+.. ...||++||.+++..+..++... .|-.+++ . +.
T Consensus 131 ~la~l~G~~~~-~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~ 209 (608)
T TIGR03811 131 EFATLMGYKNG-WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIK 209 (608)
T ss_pred HHHHHhCCCCC-CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhh
Confidence 99999999865 45678789999999988887642 1100000 0 00
Q ss_pred h-ccCCC---Cc-eEEEEcCCCCchhHHHHHHcCC---eEEEEecCCCCCCCHHHHHHHHHHhhhCCC-CeEEEEecccC
Q 043646 174 T-SLRDE---ER-WVVFLGPYEHHSNLLSWRQSLA---EVVEIGLDDNGLLDIEALRSQLELYKAAKR-PMLGSFSACSN 244 (625)
Q Consensus 174 ~-~l~~g---d~-~~Vlv~~~~h~s~~~~~~~~G~---~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~-~~lv~~~~~~n 244 (625)
+ +..+| .+ .+++++...|+|+.+++...|. .++.||+|.++++|+++|+++|.+....+. +.+|+.+.+++
T Consensus 210 ~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT 289 (608)
T TIGR03811 210 AHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGST 289 (608)
T ss_pred hhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCc
Confidence 0 00010 11 1588888889999999999888 699999999999999999999986443343 46788999999
Q ss_pred ccccccCHHHHHHHH---HHcCC--EEEEeccCcCCCc-----------ccc-----------C-------CC-----C-
Q 043646 245 VTGIYSDTRSIARLL---HQYGG--FACFDFAASGPYV-----------KIN-----------L-------RS-----R- 284 (625)
Q Consensus 245 ~TG~~~~l~~I~~la---~~~g~--~vivD~A~~~g~~-----------~id-----------~-------~~-----~- 284 (625)
.+|.++|+++|+++| +++|+ |+|||+|.++... |.+ + .+ +
T Consensus 290 ~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~ 369 (608)
T TIGR03811 290 EEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYK 369 (608)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHh
Confidence 999999999999999 67887 6999999776320 100 0 00 0
Q ss_pred CCCCCcEEEEcCCCCCCCCCCceEEEEeccccc--cCCCCCcccCCceEEeeccccccccccccchhhhhcCCC-hhHHH
Q 043646 285 NIDGYDAIFLATHKFLGGPGTPGILLISKALYQ--LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT-PQIVQ 361 (625)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~--l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt-~~~~~ 361 (625)
+.+.+|.+++++|||+..|.++|++++++.... +....++....+. ...... ......|+ +...+
T Consensus 370 gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~---------~~p~~~---g~~~legSR~ga~A 437 (608)
T TIGR03811 370 AISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGA---------DIPALL---GAYILEGSKAGATA 437 (608)
T ss_pred cCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccc---------cCcccc---cccceecCCccHHH
Confidence 235899999999999999999999999976421 1111121110000 000000 00001112 11111
Q ss_pred H-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC------CcEEE--eCCCCCCCcceEEEEeccCCCCCCccccc
Q 043646 362 M-IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN------QNIQV--LGNTSVKRQAILSFLVYSTTNSSPENMKI 432 (625)
Q Consensus 362 ~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l------~gv~v--~~~~~~~~~~i~~f~~~~~~~~~~~~~~~ 432 (625)
+ +-+++..+-....|+..+..+...+++++.+.|.+. +.+++ +.+ ....+++|...+....+
T Consensus 438 lklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~---pdlniV~Fr~~~~g~~~------ 508 (608)
T TIGR03811 438 ASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTK---PDFNMVDYVFNEKGNDD------ 508 (608)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCC---CCcceEEEEEecCCCcc------
Confidence 0 111122210134477788999999999999999873 45665 443 25789999986542110
Q ss_pred cCCCCCChHHHHHHhhhhcCee----------eecCCCCCchhhHhhhcCChhhHHHHHHHHHhCC--------CCCCCc
Q 043646 433 ERNKPLHGPFVATLFNDLFGIQ----------ARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGY--------LGVKPG 494 (625)
Q Consensus 433 ~~~~~l~~~~v~~~L~~~~gI~----------v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~--------~g~~~g 494 (625)
.-..+++.+.+.++..+. +..-.++...||+.+.. +.+.+ .+.+=.
T Consensus 509 ----l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~------------~~~~~~~~~~~~~~~~~~~ 572 (608)
T TIGR03811 509 ----LVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFA------------FVNSLGFSDEEWQRAGKVT 572 (608)
T ss_pred ----HHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHH------------HHHHcCCChhhhccCCceE
Confidence 001345666665554432 11111222223332211 11111 111235
Q ss_pred EEEEec--CCCCCHHHHHHHHHHHHHHHHh
Q 043646 495 WTRITF--PYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 495 ~iRis~--~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+|-++ ++.+.++-++.+++.|+..+.+
T Consensus 573 ~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~ 602 (608)
T TIGR03811 573 ILRASVMTPYMNDKENFDEYAPKIKAAMQE 602 (608)
T ss_pred EEEEEecCcccCChhhHHHHHHHHHHHHHH
Confidence 789987 4666778899999999887765
No 127
>PLN02822 serine palmitoyltransferase
Probab=99.90 E-value=1.7e-21 Score=213.46 Aligned_cols=342 Identities=15% Similarity=0.048 Sum_probs=227.8
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
.++.+.+++.+.+..+..+ .+.....+.+.+...++++.|+++++.+ + .|+|+ +|.++ +..++.++
T Consensus 124 ~~~~i~ea~~~al~~~G~g--~~g~r~~yg~~~~~~~Lee~La~~~~~~-~-~i~~s-~G~~a-~~sai~a~-------- 189 (481)
T PLN02822 124 GNEKIKESCTSALEKYGVG--SCGPRGFYGTIDVHLDCETKIAKFLGTP-D-SILYS-YGLST-IFSVIPAF-------- 189 (481)
T ss_pred CCHHHHHHHHHHHHHhCCC--CcccCccccCHHHHHHHHHHHHHHhCCC-C-EEEEC-CHHHH-HHHHHHHh--------
Confidence 5788999999988664221 1111112345678889999999999975 3 68887 66665 45555555
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh----CCCC-eEEEEeccc
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA----AKRP-MLGSFSACS 243 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~----~~~~-~lv~~~~~~ 243 (625)
.++|| +|++....|.+...+++..|++++.++.+ |.++++..+++... .+++ ++|+++.++
T Consensus 190 -------~~~gd--~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 190 -------CKKGD--IIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred -------CCCCC--EEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 46787 48899999999988888889999999866 56777776653211 1234 799999999
Q ss_pred CccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccC----CCCC--CCCCcEEEEcCCCCCCCCCCceEEEEeccccc
Q 043646 244 NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINL----RSRN--IDGYDAIFLATHKFLGGPGTPGILLISKALYQ 317 (625)
Q Consensus 244 n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~----~~~~--~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~ 317 (625)
+++|.+.|+++|.++|++||+++++|++|+.|...-.- ...+ ...+|+++.|++|.+| +.| |+++.++++..
T Consensus 256 ~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~G-G~i~g~~~ii~ 333 (481)
T PLN02822 256 QNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TEG-GFCTGSARVVD 333 (481)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hCC-eEEEcCHHHHH
Confidence 99999999999999999999999999999866532110 0011 1257999999999998 444 89888887732
Q ss_pred cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC
Q 043646 318 LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~ 396 (625)
.+... +.+. -|....|+..+.+ .++++.. +. .+.+.++.+++++++++.|.
T Consensus 334 --~~~~~--~~~~--------------------~fsa~lPp~~~~Aa~~aL~~l--~~--~~~~~~~l~~~~~~l~~~L~ 385 (481)
T PLN02822 334 --HQRLS--SSGY--------------------VFSASLPPYLASAAITAIDVL--ED--NPSVLAKLKENIALLHKGLS 385 (481)
T ss_pred --HHHhc--CCce--------------------eeccccCHHHHHHHHHHHHHH--Hh--CHHHHHHHHHHHHHHHHHHH
Confidence 22110 0000 0112224443322 2344433 21 24677888999999999999
Q ss_pred CCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhh
Q 043646 397 PNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476 (625)
Q Consensus 397 ~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~ 476 (625)
+++++.+..+. ..+++.+.+..... . ..+..-...++++.|++++||.+.++.....+.+
T Consensus 386 ~~~g~~~~~~~---~spi~~l~l~~~~~-~------~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~---------- 445 (481)
T PLN02822 386 DIPGLSIGSNT---LSPIVFLHLEKSTG-S------AKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKC---------- 445 (481)
T ss_pred hcCCcccCCCC---CCCEEEEEeCCCcc-c------ccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCC----------
Confidence 88788775442 45666666532100 0 0000000246788887568999987643221000
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 477 ~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..+.++|++++..+|++||++++++|++++.+
T Consensus 446 --------------~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 446 --------------RLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred --------------CCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 01357999999999999999999999988765
No 128
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.5e-21 Score=204.76 Aligned_cols=328 Identities=17% Similarity=0.128 Sum_probs=226.6
Q ss_pred CCCCceEeccCCCCCcch-HHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC-CCCCCcEEEeCChHH
Q 043646 73 FGKRRLTYADHTASGRSL-RYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG-GGQADAIIFCGAGTT 150 (625)
Q Consensus 73 ~g~~~~~Yld~~~~~~~p-~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g-~~~~~~vift~sGtt 150 (625)
.|....+.|+.+-+...| +.+.+++.+.+......|.. ...++++.+++++| .+++ .|+. |+|++
T Consensus 19 ~g~~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~-~V~~-gnGsd 85 (356)
T COG0079 19 YGLPGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPE-NVLV-GNGSD 85 (356)
T ss_pred cCCccceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHHHHHHHHhCCCCcc-eEEE-cCChH
Confidence 343457888877766554 77888887766432222322 24568999999999 5444 5666 59999
Q ss_pred HHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh
Q 043646 151 AAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA 230 (625)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~ 230 (625)
+.|..+++++ ..+||+ |+++.++|..+...++..|++++.++.++ ..+|++.+.+++.
T Consensus 86 e~i~~l~~~~---------------~~~gd~--vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~---- 143 (356)
T COG0079 86 ELIELLVRAF---------------VEPGDT--VLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR---- 143 (356)
T ss_pred HHHHHHHHHh---------------hcCCCE--EEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh----
Confidence 9999999998 578886 99999999999888999999999999988 8899999999988
Q ss_pred CCCCeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcCCCccccCCCCCCCCCc--EEEEcCCCCCCCCC-C
Q 043646 231 AKRPMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVKINLRSRNIDGYD--AIFLATHKFLGGPG-T 305 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~g~~~id~~~~~~~~~D--~v~~S~hK~lggp~-g 305 (625)
+++++|++|+|+||||...+.++|.+++... +.+|++|+|+.--.. .+.-.+.. ..+ ++.-|++|+||-++ .
T Consensus 144 -~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~-~~~nlivlRTfSKa~gLAGlR 220 (356)
T COG0079 144 -DKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLK-YPPNLIVLRTFSKAFGLAGLR 220 (356)
T ss_pred -cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhcc-CCCCEEEEEecHHhhhcchhc
Confidence 5799999999999999999999988888864 789999999432111 11111101 233 55569999998765 3
Q ss_pred ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHH
Q 043646 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQED 385 (625)
Q Consensus 306 ~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (625)
+|+++.+.++.. .+.+.. ..-+.+..+. .++.+.+ ....-++...++..
T Consensus 221 lGy~ia~~~~i~--~l~~vr---------------------------~p~~v~~~a~-~aa~aal-~~~~~~~~~~~~~~ 269 (356)
T COG0079 221 VGYAIANPELIA--ALNKVR---------------------------PPFNVSSPAL-AAAIAAL-RDADYLEESVERIR 269 (356)
T ss_pred eeeccCCHHHHH--HHHHhc---------------------------CCCCCCHHHH-HHHHHHc-ccHHHHHHHHHHHH
Confidence 999999888732 221111 0001111111 1111111 12233556677788
Q ss_pred HHHHHHHHhhCCCCcEE-EeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 386 VYIESALGRILPNQNIQ-VLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 386 ~l~~~l~~~L~~l~gv~-v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
..++++.+.|+.++ +. ++... ++|.+...+.. - ...+.+.|.+ +||.+|.... .
T Consensus 270 ~~r~rl~~~l~~~~-~~~v~pS~-----aNFvlv~~~~~--------------~-~~~l~~~L~~-~giivR~~~~-~-- 324 (356)
T COG0079 270 EERERLYAALKALG-LFGVFPSQ-----ANFVLVRVPDA--------------E-AAALAEALLK-KGILVRDCSS-V-- 324 (356)
T ss_pred HHHHHHHHHHHhCC-CCeecCCC-----CcEEEEECCCc--------------c-HHHHHHHHHH-CCEEEEeCCC-C--
Confidence 88999999999986 54 44332 55555554321 1 3368888865 6999994321 1
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+..++++||+++ |++|.++++++|++++..
T Consensus 325 -------------------------~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 325 -------------------------GLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred -------------------------CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 113589999999 999999999999988754
No 129
>PRK09265 aminotransferase AlaT; Validated
Probab=99.90 E-value=4.7e-21 Score=207.01 Aligned_cols=344 Identities=14% Similarity=0.043 Sum_probs=213.7
Q ss_pred CceEeccCCCC----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh------CCCCCCcEEEe
Q 043646 76 RRLTYADHTAS----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL------GGGQADAIIFC 145 (625)
Q Consensus 76 ~~~~Yld~~~~----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~------g~~~~~~vift 145 (625)
+..+.|+.+.. .+.|+.+.+++.+.+......+. ..+ ..++|+.+++++ +++++ +|++|
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~------~~G----~~~lr~~ia~~~~~~~~~~~~~~-~i~~t 101 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSD------SKG----LFSARKAIMQYYQQKGIPDVDVD-DIYIG 101 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCC------CCC----cHHHHHHHHHHHhccCCCCCCcc-cEEEe
Confidence 35667765433 23677888888776532211111 111 234666666666 56665 89998
Q ss_pred CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHH
Q 043646 146 GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRS 223 (625)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~ 223 (625)
+|+++++..++.++ +++||+ |+++.++|..+...++..|++++.++.+. ++.+|++++++
T Consensus 102 -~G~~~~l~~~~~~~---------------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~ 163 (404)
T PRK09265 102 -NGVSELIVMAMQAL---------------LNNGDE--VLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRS 163 (404)
T ss_pred -CChHHHHHHHHHHh---------------CCCCCE--EEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHH
Confidence 89999999888876 578885 99999999998888888899999888764 35689999999
Q ss_pred HHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEcC
Q 043646 224 QLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLAT 296 (625)
Q Consensus 224 ~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S~ 296 (625)
++. +++++|++++|+||||.+.+ +++|+++|+++|+++++|++++.-. ....+.....+..-+++.|+
T Consensus 164 ~~~-----~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 238 (404)
T PRK09265 164 KIT-----PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGL 238 (404)
T ss_pred hcc-----ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecc
Confidence 886 57999999999999999998 8889999999999999999965211 11111111111112445688
Q ss_pred CCCCCCCC-CceEEEEeccccccCCC-CCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh
Q 043646 297 HKFLGGPG-TPGILLISKALYQLGSS-PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY 374 (625)
Q Consensus 297 hK~lggp~-g~G~l~v~~~~~~l~~~-~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~ 374 (625)
.|.+|.|+ .+|++++.......+.+ .... . ......+++.+.+.+ +..++ .+.
T Consensus 239 SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~~~~~q~~--~~~~l-~~~ 293 (404)
T PRK09265 239 SKAYRVAGFRVGWMVLSGPKKHAKGYIEGLD---------------------M-LASMRLCANVPAQHA--IQTAL-GGY 293 (404)
T ss_pred hhhccCcccceEEEEEeCchHHHHHHHHHHH---------------------H-HhccccCCCcHHHHH--HHHHh-cCc
Confidence 99998665 38999874211000000 0000 0 000011222222221 11111 111
Q ss_pred cCHHHH---HHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCCh-HHHHHHhhhh
Q 043646 375 IGYEVI---KKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHG-PFVATLFNDL 450 (625)
Q Consensus 375 ~g~~~i---~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~-~~v~~~L~~~ 450 (625)
...+.+ .++..+.++++.+.|.+++++++..+ .++.+.|...+... . ...+. ..+.+.| .+
T Consensus 294 ~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p----~~g~~l~~~~~~~~---------~-~~~~~~~~~~~~l-~~ 358 (404)
T PRK09265 294 QSINELILPGGRLYEQRDRAWELLNAIPGVSCVKP----KGALYAFPKLDPKV---------Y-PIHDDEQFVLDLL-LQ 358 (404)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CcceEEEEEecccc---------c-CCCCHHHHHHHHH-Hh
Confidence 111211 12445557778888888778776655 34566665443210 0 00112 3455555 56
Q ss_pred cCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 451 FGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 451 ~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+||.+.+|..|... .++++||+++ .++++++..++.|++++..
T Consensus 359 ~gv~v~pg~~F~~~---------------------------~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 359 EKVLLVQGTGFNWP---------------------------EPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred CCEEEECchhhCCC---------------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 89999998766311 2489999995 6789999999999987753
No 130
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.90 E-value=3.7e-21 Score=212.04 Aligned_cols=356 Identities=14% Similarity=0.051 Sum_probs=219.0
Q ss_pred cCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHH
Q 043646 82 DHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEV 159 (625)
Q Consensus 82 d~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~ 159 (625)
|.++....|..+.+++.+.+..... ....|....+..++.+.+.+++.+..|. +++ +|++| +|++++|..++.+
T Consensus 82 ~~~~~~~~P~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it-~Ga~~al~~~~~~ 157 (481)
T PTZ00377 82 DPSVSSLFPADVVARAKEYLNAIGG--GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPS-DIFLT-DGASSGIKLLLQL 157 (481)
T ss_pred CccccccCCHHHHHHHHHHHHhCCC--cccCcCcccCCHHHHHHHHHHHHHhcCCCCChh-hEEEc-CCHHHHHHHHHHH
Confidence 4445555677888887765543211 1222333334455555555555554454 344 89998 8999999999888
Q ss_pred hcccccchhhhhhhhcc-CCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhh-CCCCe
Q 043646 160 MGITVPSIMRDKLITSL-RDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKA-AKRPM 235 (625)
Q Consensus 160 l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~-~~~~~ 235 (625)
+ + ++||+ |+++.+.|+.+...++..|++++.++++++ +.+|+++|++++++... ..+++
T Consensus 158 l---------------~~~~gD~--Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k 220 (481)
T PTZ00377 158 L---------------IGDPSDG--VMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPR 220 (481)
T ss_pred h---------------ccCCCCE--EEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCee
Confidence 7 4 58886 999999999999889999999999998753 47999999999874211 12789
Q ss_pred EEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCC-C----ccccC----CCCCCC---CC-cEEEEcCCCC
Q 043646 236 LGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-Y----VKINL----RSRNID---GY-DAIFLATHKF 299 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g-~----~~id~----~~~~~~---~~-D~v~~S~hK~ 299 (625)
++++++|+||||.+.+ +++|+++|++||+++|+|+++.-- + ....+ ..+..+ +. -+++.|++|.
T Consensus 221 ~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~ 300 (481)
T PTZ00377 221 ALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKG 300 (481)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcc
Confidence 9999999999999988 788999999999999999996521 1 00111 011000 01 1455699997
Q ss_pred C-CCCC-CceEEEE---eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-
Q 043646 300 L-GGPG-TPGILLI---SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE- 373 (625)
Q Consensus 300 l-ggp~-g~G~l~v---~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~- 373 (625)
+ +-|+ .+|++++ ++++. +.+... .....+.+.+.+.+ +..++..
T Consensus 301 ~~~~~GlRiG~~~~~~~p~~li--~~l~~~-------------------------~~~~~~~~~~~Q~a---~~~~l~~~ 350 (481)
T PTZ00377 301 IIGECGRRGGYFELTNIPPEVR--EQIYKL-------------------------ASINLCSNVVGQLM---TGLMCNPP 350 (481)
T ss_pred cccCCcCceEEEEEeCCCHHHH--HHHHHH-------------------------hheecCCChHHHHH---HHHHhCCC
Confidence 5 4233 3899987 55552 111100 00011222223322 1111110
Q ss_pred --hcC--------HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC-hHH
Q 043646 374 --YIG--------YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH-GPF 442 (625)
Q Consensus 374 --~~g--------~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~-~~~ 442 (625)
..+ ++.+.++.++.++.+.+.|.+++++++..+. ++.+.|.-..-...- .. . .+...+. ..+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~----gg~fl~~~~~l~~~~-~~-~-~~~~~~~~~~~ 423 (481)
T PTZ00377 351 REGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVE----GAMYAFPRIELPEKA-IQ-E-AKERGLAPDVL 423 (481)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCC----eeEEEEeeccCchhh-HH-H-HHhcCCCcHHH
Confidence 001 1222233456677888999888888887653 455555322100000 00 0 0001111 234
Q ss_pred HHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 443 VATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 443 v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
++..+++++||.+.+|..|+... .++++|||++ .++++++..++.|+++++.
T Consensus 424 ~~~~ll~~~gV~v~pG~~F~~~~--------------------------~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 424 YCLELLESTGIVVVPGSGFGQKP--------------------------GTYHFRITIL--PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred HHHHHHHHcCEEEeCCcccCCCC--------------------------CCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 45555567899999998775210 1378999998 6788999999999988765
Q ss_pred h
Q 043646 523 G 523 (625)
Q Consensus 523 ~ 523 (625)
.
T Consensus 476 ~ 476 (481)
T PTZ00377 476 F 476 (481)
T ss_pred H
Confidence 4
No 131
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.90 E-value=3e-22 Score=210.98 Aligned_cols=315 Identities=13% Similarity=0.047 Sum_probs=198.2
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
+++.+.+++.+.+... . .+ ......+++++++++++| ++ +++++++|+ +++..++.++
T Consensus 10 ~~~~v~~a~~~~~~~~----~--~~----~~~~~~~~l~~~~a~~~g--~~-~~~~~~~gt-~a~~~~~~~l-------- 67 (338)
T cd06502 10 PTPEMLEAMAAANVGD----D--VY----GEDPTTAKLEARAAELFG--KE-AALFVPSGT-AANQLALAAH-------- 67 (338)
T ss_pred CCHHHHHHHHhcccCC----c--cc----CCCHHHHHHHHHHHHHhC--CC-eEEEecCch-HHHHHHHHHh--------
Confidence 5668888887654211 0 11 112457788999999999 33 577776665 6677777766
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHHH---HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhh--hCCCCeEEEEeccc
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLLS---WRQSLAEVVEIGLDDNGLLDIEALRSQLELYK--AAKRPMLGSFSACS 243 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~---~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~--~~~~~~lv~~~~~~ 243 (625)
+++||+ |++++.+|.++... .+..|++++.++.+. +.+|+++|++++++.. ..+++++|++++++
T Consensus 68 -------~~~gd~--v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~ 137 (338)
T cd06502 68 -------TQPGGS--VICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTT 137 (338)
T ss_pred -------cCCCCe--EEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeec
Confidence 478885 88999999876532 344799999999765 6799999999997310 01268999999999
Q ss_pred Ccccc--ccCHHHHHHHHHHcCCEEEEeccCcCCC---ccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecccccc
Q 043646 244 NVTGI--YSDTRSIARLLHQYGGFACFDFAASGPY---VKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQL 318 (625)
Q Consensus 244 n~TG~--~~~l~~I~~la~~~g~~vivD~A~~~g~---~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l 318 (625)
|++|. ..++++|+++|+++|+++++|+|+..+. ....+..+ ..++|+++.|+||+++.|+| ++++.++++.
T Consensus 138 n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~-~~~~d~~~~s~sK~~~~~~g-~~~~~~~~~~-- 213 (338)
T cd06502 138 EGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY-KSGVDSVSFCLSKGGGAPVG-AVVVGNRDFI-- 213 (338)
T ss_pred CCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH-HhcCCEEEEeccccCCCccc-eEEECCHHHH--
Confidence 97443 3557889999999999999999863221 11111111 12689999999999998874 4555676662
Q ss_pred CCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 319 GSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
+.+.+... ...++....+.. .+++..+ +..+...+.++...+++++.+.|.+
T Consensus 214 ~~~~~~~~-------------------------~~~~~~~~~~~~~~a~~~~L--~~~~~~~~~~~~~~~~~~l~~~L~~ 266 (338)
T cd06502 214 ARARRRRK-------------------------QAGGGMRQSGFLAAAGLAAL--ENDLWLRRLRHDHEMARRLAEALEE 266 (338)
T ss_pred HHHHHHHH-------------------------HhCCChhhHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHHHHHHh
Confidence 22211110 001222222222 2222222 2334555667888889999999988
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhh--hcCeeeecCCCCCchhhHhhhcCChh
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFND--LFGIQARGGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~--~~gI~v~~G~~~~~~~~~~~l~~~~~ 475 (625)
++ +.+..+ ..+++.+...... .-...+.+.+.+ ++||.++..
T Consensus 267 ~~-~~~~~~----~~~~~~v~~~~~~--------------~~~~~l~~~l~~~~~~gi~~~~~----------------- 310 (338)
T cd06502 267 LG-GLESEV----QTNIVLLDPVEAN--------------AVFVELSKEAIERRGEGVLFYAW----------------- 310 (338)
T ss_pred cC-CCcccc----cCCeEEEecCCcc--------------HHHHHHHHHHHHhhhCCEEEEec-----------------
Confidence 74 433322 3455544432110 001122222210 358877531
Q ss_pred hHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 476 RSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
..+++||+++++++++|+++++++++.
T Consensus 311 ----------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 ----------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ----------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 126799999999999999999999875
No 132
>PRK07683 aminotransferase A; Validated
Probab=99.90 E-value=5.1e-21 Score=205.49 Aligned_cols=342 Identities=18% Similarity=0.107 Sum_probs=220.9
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal 153 (625)
..+.|..+... +.++.+.+++.+.+.... . .|....+..++.+++.+++.+..|. +++.+|++| +|++.++
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~----~-~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t-~G~~~al 102 (387)
T PRK07683 29 NLISLTIGQPDFPTPSHVKEAAKRAITENY----T-SYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVT-IGASEAI 102 (387)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CChHHHH
Confidence 34555555433 345678888877664321 1 1211122344444555555444454 333268998 7899999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC-CCCCHHHHHHHHHHhhhCC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN-GLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~ 232 (625)
..++..+ +++||+ |+++.+.|+.+...++..|++++.++.+.+ ..+|.+++++.+. +
T Consensus 103 ~~~~~~l---------------~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-----~ 160 (387)
T PRK07683 103 DIAFRTI---------------LEPGTE--VILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-----E 160 (387)
T ss_pred HHHHHHh---------------CCCCCE--EEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-----c
Confidence 9988876 578885 999999988888788889999999998764 4678899999886 5
Q ss_pred CCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc---cccCCCC-CCCCCcEEEEcCCCCCCCCC-
Q 043646 233 RPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV---KINLRSR-NIDGYDAIFLATHKFLGGPG- 304 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~---~id~~~~-~~~~~D~v~~S~hK~lggp~- 304 (625)
+++++++++++||||.+.+ +++|+++|+++|+++++|++++.... ...+... +..+-.+++.|++|.+|.|+
T Consensus 161 ~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl 240 (387)
T PRK07683 161 KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW 240 (387)
T ss_pred CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc
Confidence 7899999999999999976 78889999999999999999764321 1112211 01123577889999998664
Q ss_pred CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC-CChhHHHHHHHHHHHHHHhhcCHHHHHHH
Q 043646 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG-GTPQIVQMIRAALAFWVKEYIGYEVIKKQ 383 (625)
Q Consensus 305 g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~~aal~~~~~~~~g~~~i~~~ 383 (625)
.+|++++++++.+ .+... ..+.. +.+.+.+ .++..++.....-.+.++++
T Consensus 241 RiG~i~~~~~l~~--~~~~~-------------------------~~~~~~~~~~~~q--~~~~~~l~~~~~~~~~~~~~ 291 (387)
T PRK07683 241 RIGFLFAPSYLAK--HILKV-------------------------HQYNVTCASSISQ--YAALEALTAGKDDAKMMRHQ 291 (387)
T ss_pred eeEEEEcCHHHHH--HHHHH-------------------------HHhccCCCChHHH--HHHHHHHhCChHHHHHHHHH
Confidence 4899999887622 11100 01111 1222222 22233331111123455666
Q ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 384 EDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
.+..++++.+.|.+. ++.+..+ .++.+.+...+.. .++..+++..+.+++||.+++|..|..
T Consensus 292 ~~~~~~~~~~~l~~~-~~~~~~~----~~~~~~~~~~~~~-------------~~~~~~~~~~ll~~~gI~v~pg~~f~~ 353 (387)
T PRK07683 292 YKKRRDYVYNRLISM-GLDVEKP----TGAFYLFPSIGHF-------------TMSSFDFALDLVEEAGLAVVPGSAFSE 353 (387)
T ss_pred HHHHHHHHHHHHHHc-CCcccCC----CeeEEEEEecccC-------------CCCHHHHHHHHHHhCCEEEcCchhhCC
Confidence 677788888888775 6665544 3455555444321 234556776655678999998876641
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
. .++++||+++. +++++...++.|.+++..
T Consensus 354 ~---------------------------~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 354 Y---------------------------GEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred C---------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 1 24899999984 688999999998887654
No 133
>PRK07337 aminotransferase; Validated
Probab=99.90 E-value=1.6e-21 Score=209.51 Aligned_cols=342 Identities=15% Similarity=0.098 Sum_probs=219.7
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAA 152 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaa 152 (625)
...++|+.+... +.++.+.+++.+.+... .. .|....+..++.+.+.+++.+.+|. +++ +|++| +|++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~t-~G~~~a 102 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRG----VT-QYTSALGLAPLREAIAAWYARRFGLDVAPE-RIVVT-AGASAA 102 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHhCCCCChH-hEEEe-cCcHHH
Confidence 457888887765 35678888887766421 01 1211222344555555555555564 444 79998 789999
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhh
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKA 230 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~ 230 (625)
|..++.++ +++||+ |+++.++|+.+...++..|++++.++++. ++.+|+++|++.+.
T Consensus 103 l~~~~~~l---------------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---- 161 (388)
T PRK07337 103 LLLACLAL---------------VERGDE--VLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG---- 161 (388)
T ss_pred HHHHHHHh---------------cCCCCE--EEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC----
Confidence 99988877 578886 99999999999888888899999999875 35899999999887
Q ss_pred CCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcC-CCcc--ccCCCCCCCCCcE-EEEcCCCCCCCC
Q 043646 231 AKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG-PYVK--INLRSRNIDGYDA-IFLATHKFLGGP 303 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~-g~~~--id~~~~~~~~~D~-v~~S~hK~lggp 303 (625)
+++++|++++++||||.+.+ +++|+++|+++|+++++|+++.. .+.. .....+ +.++ ++.|++|.||.|
T Consensus 162 -~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~vi~~~S~SK~~~~~ 237 (388)
T PRK07337 162 -ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSL---GDDVITINSFSKYFNMT 237 (388)
T ss_pred -ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhc---cCCEEEEEechhhcCCc
Confidence 57899999999999999876 67888999999999999998652 2111 111111 2344 456999999856
Q ss_pred C-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh-cCHHHHH
Q 043646 304 G-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY-IGYEVIK 381 (625)
Q Consensus 304 ~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~-~g~~~i~ 381 (625)
+ .+|++++++++. ..+.... .....+.+.+.+.+ +..++..+. ...++.+
T Consensus 238 G~RiG~~~~~~~l~--~~l~~~~------------------------~~~~~~~s~~~q~~--~~~~l~~~~~~~~~~~~ 289 (388)
T PRK07337 238 GWRLGWLVVPEALV--GTFEKLA------------------------QNLFICASALAQHA--ALACFEPDTLAIYERRR 289 (388)
T ss_pred hhheeeeecCHHHH--HHHHHHH------------------------HHhccCCChHHHHH--HHHHhccCchHHHHHHH
Confidence 5 389999987762 2211100 00111222222221 122221010 1133445
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEe-CCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCC
Q 043646 382 KQEDVYIESALGRILPNQNIQVL-GNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCA 460 (625)
Q Consensus 382 ~~~~~l~~~l~~~L~~l~gv~v~-~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~ 460 (625)
++.++.++++.+.|.++ ++.+. .| .++.+.|.-.+... ....++..++++.|.+++||.+.+|..
T Consensus 290 ~~~~~~r~~~~~~L~~~-~~~~~~~p----~~g~f~~~~~~~~~---------~~~~~~~~~~~~~ll~~~gv~v~pg~~ 355 (388)
T PRK07337 290 AEFKRRRDFIVPALESL-GFKVPVMP----DGAFYVYADCRGVA---------HPAAGDSAALTQAMLHDAGVVLVPGRD 355 (388)
T ss_pred HHHHHHHHHHHHHHHhc-CCccccCC----CeeEEEEEeccccc---------CCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 56666677888888775 55432 23 34555555443210 001134567887766778999999877
Q ss_pred CCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 461 CAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
|+.+ . .++++||+++. ++++++..++.|.++
T Consensus 356 f~~~--~------------------------~~~~~Ri~~~~--~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 356 FGPH--A------------------------PRDYIRLSYAT--SMSRLEEAVARLGKL 386 (388)
T ss_pred hCCC--C------------------------CCCEEEEEecC--CHHHHHHHHHHHHHH
Confidence 6421 0 24899999984 577777777777654
No 134
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=2.2e-22 Score=215.44 Aligned_cols=309 Identities=16% Similarity=0.147 Sum_probs=197.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+++++.+++++|++ . .+++ ++|+.+ +..++. + +++||+ |+++...|+++
T Consensus 48 y~r~~~p~~~~le~~lA~l~g~~-~-~v~~-~sG~~a-i~~~l~-~---------------l~~Gd~--Vlv~~~~y~~~ 105 (390)
T PRK08064 48 YSRSGNPTREALEDIIAELEGGT-K-GFAF-ASGMAA-ISTAFL-L---------------LSKGDH--VLISEDVYGGT 105 (390)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC-C-eEEE-CCHHHH-HHHHHH-H---------------hCCCCE--EEEccCccchH
Confidence 34444556788999999999986 3 5666 488764 555544 2 468886 88899999876
Q ss_pred HHHH----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
...| +..|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|.++||++|+++++|+
T Consensus 106 ~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~-----~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~ 175 (390)
T PRK08064 106 YRMITEVLSRFGIEHTFVDMT-----NLEEVAQNIK-----PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDN 175 (390)
T ss_pred HHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-----CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEEC
Confidence 5444 3479999999864 7899999887 589999999999999999999999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
+++.+.....+ ++ ++|+++.|+||+++|+.+ .|++++++ ++ .+.+.+...++
T Consensus 176 a~~~~~~~~~~-~~---g~Divv~S~tK~~~G~~~~laG~~v~~~~~~--~~~l~~~~~~~------------------- 230 (390)
T PRK08064 176 TFLTPLLQKPL-DL---GADVVLHSATKFLAGHSDVLAGLAVVKDEEL--AQKLYFLQNSF------------------- 230 (390)
T ss_pred CCCcccccCch-hh---CCcEEEeecceeccCCccceeEEEEeCCHHH--HHHHHHHHHhc-------------------
Confidence 98876543333 23 789999999999998876 48787764 33 12222221111
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCC-------------CCCCcc
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNT-------------SVKRQA 413 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~-------------~~~~~~ 413 (625)
|...... .+.+.. ..........++....+..+.+.|++.|.+ +++.|. ....++
T Consensus 231 -------g~~~~~~--~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg 299 (390)
T PRK08064 231 -------GAVLGVQ--DCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGA 299 (390)
T ss_pred -------CCCCCHH--HHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcce
Confidence 1110000 000100 011112333444455567777777776654 333331 124677
Q ss_pred eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCe---eeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhC
Q 043646 414 ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGI---QARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKG 487 (625)
Q Consensus 414 i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI---~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g 487 (625)
+++|.+.. ...+.+.+ +..++ .++-|..++. |..-.+..+..+...
T Consensus 300 ~~sf~~~~------------------~~~~~~f~-~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~--------- 351 (390)
T PRK08064 300 VLSFTLQS------------------EEAVRQFV-SHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERD--------- 351 (390)
T ss_pred EEEEEECC------------------HHHHHHHH-HhCCcceEcccCCCCcceeECCcccccccCCHHHHH---------
Confidence 88988732 12333333 33455 6666632210 100000011111100
Q ss_pred CCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 488 YLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 488 ~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..|+.++.+|+|+|.++.++.++.|.++|+++
T Consensus 352 ~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 352 ERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred hcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 13456799999999999999999999999874
No 135
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.8e-21 Score=206.50 Aligned_cols=337 Identities=11% Similarity=0.027 Sum_probs=215.2
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh-----CCCCCCcEEEeCChHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL-----GGGQADAIIFCGAGTT 150 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~-----g~~~~~~vift~sGtt 150 (625)
..++|+.+... +.|+.+.+++.+........+. ..+ ..++|+.+++++ +++++ +|++| +|++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~------~~g----~~~lr~~ia~~~~~~~~~~~~~-~i~~t-~G~~ 98 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSH------SQG----IPELREAFAKYYKKWGIDVEPD-EILIT-NGGS 98 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCC------CCC----CHHHHHHHHHHHHHhCCCCCcc-eEEEc-CChH
Confidence 47889888765 4677888888665432211111 111 234556666655 34555 89998 7889
Q ss_pred HHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CC-C-CCHHHHHHHHHH
Q 043646 151 AAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NG-L-LDIEALRSQLEL 227 (625)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~-~-ld~~~L~~~l~~ 227 (625)
+++..++..+ +++||+ |+++.+.|..+...++..|++++.++++. ++ . .++++|+++++
T Consensus 99 ~al~~~~~~l---------------~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~- 160 (397)
T PRK07568 99 EAILFAMMAI---------------CDPGDE--ILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT- 160 (397)
T ss_pred HHHHHHHHHh---------------cCCCCE--EEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-
Confidence 9999888776 478885 88888777776666677899999999863 33 2 36789998886
Q ss_pred hhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCC
Q 043646 228 YKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKF 299 (625)
Q Consensus 228 ~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~ 299 (625)
+++++|++++|+||||.+.+ +++|+++|+++|+++++|++++.-. ....+.... ...--+++.|++|.
T Consensus 161 ----~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~ 236 (397)
T PRK07568 161 ----PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKR 236 (397)
T ss_pred ----ccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhh
Confidence 57899999999999999975 6889999999999999999965211 111111110 01123667799999
Q ss_pred CCCCC-CceEEEEe-ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-hcC
Q 043646 300 LGGPG-TPGILLIS-KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE-YIG 376 (625)
Q Consensus 300 lggp~-g~G~l~v~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~-~~g 376 (625)
++.|+ .+|+++++ +++. ..+... .. ...+++.+.+.+ +..++.. ...
T Consensus 237 ~~~~G~R~G~~~~~~~~~~--~~~~~~------------------------~~-~~~~~s~~~q~~---~~~~l~~~~~~ 286 (397)
T PRK07568 237 YSACGARIGCLISKNKELI--AAAMKL------------------------CQ-ARLSPPTLEQIG---AAALLDTPESY 286 (397)
T ss_pred ccCCCcceEEEecCCHHHH--HHHHHH------------------------hh-ccCCCCcHHHHH---HHHHhhCCHHH
Confidence 98554 48998875 3442 111000 00 011223333321 1112111 112
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhh-----c
Q 043646 377 YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDL-----F 451 (625)
Q Consensus 377 ~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~-----~ 451 (625)
.+.+.+..+..++.+.+.|.+++++.+..+. ++.+.+.-.+.. +..++++.|.++ .
T Consensus 287 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~----g~~~~~~~l~~~---------------~~~~~~~~l~~~~~~~~~ 347 (397)
T PRK07568 287 FDEVREEYKKRRDILYEELNKIPGVVCEKPK----GAFYIIAKLPVD---------------DAEDFAKWLLTDFNYNGE 347 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceecCCC----cceEEEEecCCC---------------CHHHHHHHHHhhcccccc
Confidence 3455666677788888999888777765442 344444433321 245777777653 6
Q ss_pred CeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 452 GIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 452 gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
||.+.+|..|... .+..++++||+++ .++++++..++.|++++++
T Consensus 348 gv~v~pg~~f~~~------------------------~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 348 TVMVAPASGFYAT------------------------PGLGKNEIRIAYV--LNEEDLKRAMEILKEALEK 392 (397)
T ss_pred eEEEeCchHhcCC------------------------CCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHH
Confidence 9999988765311 0112479999997 3679999999999987765
No 136
>PRK07777 aminotransferase; Validated
Probab=99.90 E-value=1.8e-21 Score=209.00 Aligned_cols=333 Identities=12% Similarity=0.017 Sum_probs=215.5
Q ss_pred hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 90 LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 90 p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
|+.+.+++.+.+... .. .|....+..++.+.+.+++.+.+|.+ ++++|++| +|+++++..++.++
T Consensus 39 ~~~~~~~~~~~~~~~----~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~~------- 105 (387)
T PRK07777 39 PPEMLEAAQEAIAGG----VN-QYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVT-VGATEAIAAAVLGL------- 105 (387)
T ss_pred CHHHHHHHHHHHhcC----CC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCcHHHHHHHHHHh-------
Confidence 345666666655321 11 12222334566666777777777765 33369998 78888888877766
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC---CCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN---GLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~---~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
+++||+ |++..+.|+.+...++..|++++.++++++ +.+|+++|++++. +++++|++++++|
T Consensus 106 --------~~~gd~--vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~l~~p~N 170 (387)
T PRK07777 106 --------VEPGDE--VLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-----PRTRALIVNSPHN 170 (387)
T ss_pred --------cCCCCE--EEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-----cccEEEEEcCCCC
Confidence 468885 888888898888778888999999998754 4689999999886 5789999999999
Q ss_pred ccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccc
Q 043646 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKAL 315 (625)
Q Consensus 245 ~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~ 315 (625)
|||.+.+ +++|.++|+++++++++|++++... ....+... ...+.++++.|++|.||.|+ .+|++++++++
T Consensus 171 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l 250 (387)
T PRK07777 171 PTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPL 250 (387)
T ss_pred CCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHH
Confidence 9999875 7788999999999999999975311 11112211 11245788899999998664 37999988776
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhh
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L 395 (625)
. +.+.... .......+...+.+ +..++.....-.+.++++..+.++++.+.|
T Consensus 251 ~--~~~~~~~------------------------~~~~~~~~~~~q~~--~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 302 (387)
T PRK07777 251 I--AAVRAAK------------------------QYLTYVGGAPFQPA--VAHALDHEDAWVAALRDSLQAKRDRLAAGL 302 (387)
T ss_pred H--HHHHHHH------------------------hhcccCCCCHHHHH--HHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1111000 00001111222211 111221111123455667777788888888
Q ss_pred CCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChh
Q 043646 396 LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 396 ~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~ 475 (625)
.++ ++++..+. ++.+.+...+.. ...+..++++.|.+++||.+.+|..|..+...
T Consensus 303 ~~~-~~~~~~~~----g~~~~~~~~~~~------------~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~-------- 357 (387)
T PRK07777 303 AEA-GFEVHDSA----GTYFLCADPRPL------------GYDDGTEFCRALPERVGVAAIPMSVFYDPADA-------- 357 (387)
T ss_pred HhC-CCCccCCC----cceEEEeccccc------------CCCCHHHHHHHHHHhCCEEEeCchHhCCCCcC--------
Confidence 876 66665442 344444332211 01245688999977789999998766421000
Q ss_pred hHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 476 RSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++||+++. ++++++..++.|+++..
T Consensus 358 ----------------~~~~~Ri~~~~--~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 358 ----------------WNHLVRFAFCK--RDDTLDEAIRRLRALRG 385 (387)
T ss_pred ----------------CCCeEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 24789999974 68999999998887653
No 137
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.2e-21 Score=205.97 Aligned_cols=302 Identities=15% Similarity=0.110 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH
Q 043646 120 TKMVHEASNYIKRCLG--GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~ 197 (625)
..+.+.+.+++.+..| .+++ +|++| +|++.++..++.++ +++||+ |+++.+.|+.+...
T Consensus 69 ~~lr~~ia~~~~~~~~~~~~~~-~i~it-~G~~~al~~~~~~~---------------~~~gd~--vlv~~p~y~~~~~~ 129 (384)
T PRK06348 69 VELIEEIIKYYSKNYDLSFKRN-EIMAT-VGACHGMYLALQSI---------------LDPGDE--VIIHEPYFTPYKDQ 129 (384)
T ss_pred HHHHHHHHHHHHHHhCCCCChh-hEEEc-CChHHHHHHHHHHh---------------cCCCCE--EEEeCCCCcchHHH
Confidence 3455555566655444 4454 89998 89999999998887 578886 99999999999888
Q ss_pred HHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccC
Q 043646 198 WRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~ 272 (625)
++..|++++.++.++ +..+|+++|+++++ +++++|++++++||||.+.+ +++|.++|+++|+++++|+++
T Consensus 130 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y 204 (384)
T PRK06348 130 IEMVGGKPIILETYEEDGFQINVKKLEALIT-----SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVY 204 (384)
T ss_pred HHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-----cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccc
Confidence 888999999998743 34699999999886 57899999999999999987 677888899999999999996
Q ss_pred cCCCc---cccCCCCC-CCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 273 SGPYV---KINLRSRN-IDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 273 ~~g~~---~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
+.... ...+.... .....+++.|++|.++.|+ .+|++++++.+. ..+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~--~~~~~~----------------------- 259 (384)
T PRK06348 205 DGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYII--ETAKII----------------------- 259 (384)
T ss_pred ccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHH--HHHHHH-----------------------
Confidence 63211 11222211 0123467789999998554 489999987762 111100
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~ 427 (625)
......+.+.+.+. ++..++.....-.+.+++..+..++++.+.|..++++++..+ .++.+.|...+..
T Consensus 260 -~~~~~~~~~~~~q~--~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p----~gg~~~~~~~~~~---- 328 (384)
T PRK06348 260 -NEGICFSAPTISQR--AAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPP----KGSIYAFINIKKT---- 328 (384)
T ss_pred -HHhccCCCCHHHHH--HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccC----CeeEEEEEecccC----
Confidence 00001122232222 112222110111334555666667888888888777776654 3455555444321
Q ss_pred ccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 428 ~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
+++..++++.+.+++||.+.+|..|+.. .++++||+++ .+++
T Consensus 329 ---------~~~~~~l~~~l~~~~gv~v~pg~~f~~~---------------------------~~~~iRi~~~--~~~~ 370 (384)
T PRK06348 329 ---------GLSSVEFCEKLLKEAHVLVIPGKAFGES---------------------------GEGYIRLACT--VGIE 370 (384)
T ss_pred ---------CCCHHHHHHHHHHhCCEEEcCchhhccC---------------------------CCCeEEEEec--CCHH
Confidence 2346678888767789999998776411 2489999996 4788
Q ss_pred HHHHHHHHHHHH
Q 043646 508 EFEFILAALEFI 519 (625)
Q Consensus 508 did~ll~aL~~~ 519 (625)
+++..++.|+++
T Consensus 371 ~l~~al~~l~~~ 382 (384)
T PRK06348 371 VLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhh
Confidence 888888887653
No 138
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=5.7e-21 Score=209.98 Aligned_cols=357 Identities=14% Similarity=0.131 Sum_probs=226.1
Q ss_pred CceEeccCCCCCcchHHHHHHHHHhhCCCC-------CCCCCCcchhhHHHHHHHHHHHHHHHHHhC----CCCCCcEEE
Q 043646 76 RRLTYADHTASGRSLRYIEDYIINNVLPFY-------GNTHTSDSYVGQRMTKMVHEASNYIKRCLG----GGQADAIIF 144 (625)
Q Consensus 76 ~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~-------~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g----~~~~~~vif 144 (625)
..++-|+.+-...+.+.+.+.+.+...... ..++...|....+..++.+.+.+++.+..| .+++ +|++
T Consensus 46 ~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-~Ivi 124 (496)
T PLN02376 46 HGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-RVVM 124 (496)
T ss_pred CceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-hEEE
Confidence 468999998888777777777766543210 111111122222345566666666666655 5565 8999
Q ss_pred eCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH-HcCCeEEEEecCC--CCCCCHHHH
Q 043646 145 CGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR-QSLAEVVEIGLDD--NGLLDIEAL 221 (625)
Q Consensus 145 t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~--~~~ld~~~L 221 (625)
| +|+++++..++.++ .+|||. |+++.+.|+.+...++ ..|++++.|+++. +..+|++++
T Consensus 125 t-~Ga~~al~~l~~~l---------------~~pGD~--Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~l 186 (496)
T PLN02376 125 S-GGATGANETIMFCL---------------ADPGDV--FLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAA 186 (496)
T ss_pred c-cchHHHHHHHHHHh---------------CCCCCE--EEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHH
Confidence 8 89999999999988 589986 9999999999987777 4799999999963 457899999
Q ss_pred HHHHHHhh-hCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCC----CCC--
Q 043646 222 RSQLELYK-AAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSR----NID-- 287 (625)
Q Consensus 222 ~~~l~~~~-~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~----~~~-- 287 (625)
++++.... ...++++|++++|+||||.+.+ +++|+++|++||+++|+|++++.-. ....+..+ ...
T Consensus 187 e~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~ 266 (496)
T PLN02376 187 DWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEV 266 (496)
T ss_pred HHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhcccccccc
Confidence 88764311 1247899999999999999988 5567889999999999999976421 11111111 000
Q ss_pred CCc--EEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC-ChhHHHHH
Q 043646 288 GYD--AIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG-TPQIVQMI 363 (625)
Q Consensus 288 ~~D--~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g-t~~~~~~~ 363 (625)
..+ +++.|++|.||.|+ .+|+++..++... .... .....+ .+.+.+
T Consensus 267 ~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~---------------------------~~~~~~~vs~~~Q-- 316 (496)
T PLN02376 267 NVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCAR---------------------------KMSSFGLVSSQTQ-- 316 (496)
T ss_pred CCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHH---------------------------HHhhcCCCCHHHH--
Confidence 113 34679999998665 4999998544311 1100 000111 222222
Q ss_pred HHHHHHHHHhhcC----HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 364 RAALAFWVKEYIG----YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 364 ~aal~~~~~~~~g----~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
.++..++.+... ....+++.....+.+.+.|.+. ++.++.+ .++.+.|.-.+....+ ....-.
T Consensus 317 -~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~----~aG~flwi~l~~~~~~-------~~~~~~ 383 (496)
T PLN02376 317 -LMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTS----NAGLFAWMDLRHLLRD-------RNSFES 383 (496)
T ss_pred -HHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCC----CceEEEEEEchhhhcc-------CCchhH
Confidence 222222212111 1223445555566777777764 6665544 3466666655421000 000111
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..++++.|.++.||.+.+|..|... .+||+||+|+. .++++++..++.|+++
T Consensus 384 e~~l~~~ll~~~gV~v~pGs~F~~~---------------------------~~g~~Ri~fa~-~~~~~l~~al~rl~~~ 435 (496)
T PLN02376 384 EIELWHIIIDKVKLNVSPGSSFRCT---------------------------EPGWFRICFAN-MDDDTLHVALGRIQDF 435 (496)
T ss_pred HHHHHHHHHHcCCEEEeCccccCCC---------------------------CCCEEEEEeeC-CCHHHHHHHHHHHHHH
Confidence 2467787777789999999877411 25899999984 4578999999999988
Q ss_pred HHh
Q 043646 520 AAY 522 (625)
Q Consensus 520 ~~~ 522 (625)
+.+
T Consensus 436 l~~ 438 (496)
T PLN02376 436 VSK 438 (496)
T ss_pred HHH
Confidence 764
No 139
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=5.1e-21 Score=206.61 Aligned_cols=343 Identities=15% Similarity=0.107 Sum_probs=210.6
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCC-cchhhHHHHHHHHH-HHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTS-DSYVGQRMTKMVHE-ASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~-~~~~~~~~~~~~~~-~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
...++.|.+++...+...|+....+ ....|....+..++ +++.+++++|.+. .+++++||+.+++ .++.++
T Consensus 38 n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~-~~l~al---- 110 (416)
T PRK13034 38 NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANG-AVYLAL---- 110 (416)
T ss_pred cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHH-HHHHHh----
Confidence 3457899999988863333321111 12223222222232 5559999999873 3455557766644 445554
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchh-HHHHHH--cCCeE--EEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEE
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSN-LLSWRQ--SLAEV--VEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGS 238 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~--~G~~v--v~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~ 238 (625)
+++||+ |++++..|.+. ....+. .+... +.++++. ++.+|++++++++.. .++++|+
T Consensus 111 -----------~~~GD~--Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~----~~~klVi 173 (416)
T PRK13034 111 -----------LKPGDT--ILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE----HKPKLII 173 (416)
T ss_pred -----------cCCCCE--EEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhh----cCCeEEE
Confidence 578996 99999999873 222221 12222 3444443 467999999999864 3688887
Q ss_pred EecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecccccc
Q 043646 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQL 318 (625)
Q Consensus 239 ~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l 318 (625)
++. ..+|...|+++|.++|++||+++++|+||++|....+.......++|++++|+||+++||.| |+++.+++...
T Consensus 174 ~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~- 249 (416)
T PRK13034 174 AGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIA- 249 (416)
T ss_pred ECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHH-
Confidence 754 34688899999999999999999999999988776544332224689999999999988887 77777655421
Q ss_pred CCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC
Q 043646 319 GSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN 398 (625)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l 398 (625)
..+.+..+.+. .+.+.....+++++++......+....+++.+++++++++.|.++
T Consensus 250 ~~~~~~~~~~~------------------------~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~ 305 (416)
T PRK13034 250 KKINSAVFPGL------------------------QGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER 305 (416)
T ss_pred HHHHhhcCCcc------------------------cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111111110 011112222222223321111233456789999999999999887
Q ss_pred CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHH
Q 043646 399 QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSL 478 (625)
Q Consensus 399 ~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~ 478 (625)
|+.+..+. ...+++.+.+... ......+.+.| ++.||.+..-.... ...
T Consensus 306 -G~~~~~~~--~~t~i~~v~~~~~--------------~~~~~~~~~~L-~~~GI~v~~~~~p~---~~~---------- 354 (416)
T PRK13034 306 -GYDLVSGG--TDNHLLLVDLRPK--------------GLSGKDAEQAL-ERAGITVNKNTVPG---DTE---------- 354 (416)
T ss_pred -CCEeccCC--CCCcEEEEEcCCC--------------CCCHHHHHHHH-HhCCcEEeccCCCC---CCc----------
Confidence 88886531 1345554444321 12345666777 45799987421110 000
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCC----CCCHHHHHHHHHHHHHHHHh
Q 043646 479 EIRSAIQKGYLGVKPGWTRITFPY----YMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 479 ~~~~~~~~g~~g~~~g~iRis~~~----~~t~edid~ll~aL~~~~~~ 522 (625)
+.. -+..+|++++. .++++|+++++++|++++..
T Consensus 355 ---------~p~-~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 355 ---------SPF-VTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred ---------CCC-CCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 000 13569999887 66799999999999998763
No 140
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.90 E-value=5.1e-21 Score=206.50 Aligned_cols=350 Identities=15% Similarity=0.010 Sum_probs=220.7
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC-CCCcEEEeCChHHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG-QADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~-~~~~vift~sGttaal~~ 155 (625)
++.|..+... +.++.+.+++.+.+... . ..|....+..++.+.+.+++++.+|.. .+++|++| +|++.++..
T Consensus 35 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t-~G~~~al~~ 108 (402)
T PRK06107 35 IVDLTVGEPDFDTPDHIKQAAVAAIERG---E--TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVG-GGAKQAIFL 108 (402)
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHcC---C--CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEe-CCHHHHHHH
Confidence 3444433333 23567778777766321 0 012222234567778888888888874 22389998 899999998
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~ 233 (625)
++.++ +++||. |+++.+.|+.+...+...++.++.++++. ++.+|+++|++++. ++
T Consensus 109 ~~~~~---------------~~~gd~--vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----~~ 166 (402)
T PRK06107 109 ALMAT---------------LEAGDE--VIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-----PR 166 (402)
T ss_pred HHHHh---------------cCCCCE--EEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-----cC
Confidence 87765 578885 88988888887777777888888888763 34689999999886 57
Q ss_pred CeEEEEecccCccccccCH---HHHHHHHHHc-CCEEEEeccCcCC-C---ccccCCCCCC--CCCcEEEEcCCCCCCCC
Q 043646 234 PMLGSFSACSNVTGIYSDT---RSIARLLHQY-GGFACFDFAASGP-Y---VKINLRSRNI--DGYDAIFLATHKFLGGP 303 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~l---~~I~~la~~~-g~~vivD~A~~~g-~---~~id~~~~~~--~~~D~v~~S~hK~lggp 303 (625)
++++++++++||||.+.+. ++|+++|+++ |+++|+|++++.- + ....+..... ...-+++.|++|.|+.|
T Consensus 167 ~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~p 246 (402)
T PRK06107 167 TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMT 246 (402)
T ss_pred ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCc
Confidence 8999999999999999874 6678888998 9999999986521 1 0111111100 12346667899999756
Q ss_pred C-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-hcCHHHHH
Q 043646 304 G-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE-YIGYEVIK 381 (625)
Q Consensus 304 ~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~-~~g~~~i~ 381 (625)
+ .+|+++.++++. +.+.... .....+...+.+ +++..++.+ ....+...
T Consensus 247 GlRiG~~~~~~~~~--~~~~~~~------------------------~~~~~~~s~~~q---~~~~~~l~~~~~~~~~~~ 297 (402)
T PRK06107 247 GWRIGYAAGPADLI--AAINKLQ------------------------SQSSSCPSSISQ---AAAAAALNGDQSFVTESV 297 (402)
T ss_pred ccceeeeecCHHHH--HHHHHHH------------------------HhcccCCChHHH---HHHHHHhcCChHHHHHHH
Confidence 5 389999888762 2211100 000112222222 222222211 11133445
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC-CChHHHHHHhhhhcCeeeecCCC
Q 043646 382 KQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP-LHGPFVATLFNDLFGIQARGGCA 460 (625)
Q Consensus 382 ~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~-l~~~~v~~~L~~~~gI~v~~G~~ 460 (625)
+...+.++.+.+.|.+++++.+..+. ++.+.|...+..... ....+.. .+..+++..|.+++||.+++|..
T Consensus 298 ~~~~~~~~~~~~~L~~~~g~~~~~p~----gg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~ 369 (402)
T PRK06107 298 AVYKQRRDYALALLNAIPGLSCLVPD----GAFYLYVNCAGLIGK----TTPEGKVLETDQDVVLYLLDSAGVAVVQGTA 369 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccCCC----cceEEeeeccccccc----ccccccCCCCHHHHHHHHHHhCCEEEeCccc
Confidence 55666677888888887777766543 455555443210000 0000111 13456776676778999999987
Q ss_pred CCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 461 CAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
|+ .++++||+++. +++++++.++.|.++++++
T Consensus 370 Fg-----------------------------~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 370 YG-----------------------------LSPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred cC-----------------------------CCCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 64 13899999984 7899999999999887653
No 141
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.90 E-value=2.2e-21 Score=209.32 Aligned_cols=345 Identities=11% Similarity=-0.031 Sum_probs=218.0
Q ss_pred ceEeccCCCC-----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC-----CCCCCcEEEeC
Q 043646 77 RLTYADHTAS-----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG-----GGQADAIIFCG 146 (625)
Q Consensus 77 ~~~Yld~~~~-----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g-----~~~~~~vift~ 146 (625)
..+.|..+.. .++++.+.+++.+.+... +...|....+ ..++|+.++++++ ++++ +|++|
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g----~~~lr~aia~~~~~~~~~~~~~-~i~~t- 101 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG----KYNGYAPTVG----ALSAREAIASYYHNPDGPIEAD-DVVLC- 101 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhcc----CCCCCCCCCC----CHHHHHHHHHHHhhcCCCCCHH-HEEEC-
Confidence 4555555443 345678888887766431 1001111111 2346666666665 4444 78887
Q ss_pred ChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHH
Q 043646 147 AGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQ 224 (625)
Q Consensus 147 sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~ 224 (625)
+|+++++..++.++ +++||+ |+++.+.|..+...++..|++++.++++. ++.+|++.|+++
T Consensus 102 ~G~~~al~~~~~~l---------------~~~gd~--v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~ 164 (401)
T TIGR01264 102 SGCSHAIEMCIAAL---------------ANAGQN--ILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESL 164 (401)
T ss_pred cChHHHHHHHHHHh---------------CCCCCE--EEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHH
Confidence 89999999998887 468885 88888888888878888999999998864 457999999988
Q ss_pred HHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEcCC
Q 043646 225 LELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLATH 297 (625)
Q Consensus 225 l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S~h 297 (625)
+. .+++++++++++||||.+.+ +++|+++|+++|+++++|+++..-. ....+........-+++.|++
T Consensus 165 ~~-----~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 239 (401)
T TIGR01264 165 ID-----EKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLA 239 (401)
T ss_pred hc-----cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCc
Confidence 86 46899999999999999976 7788999999999999999965211 111222221111135677999
Q ss_pred CCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh--cCCChhHHHHHHHHHHHHHHh-
Q 043646 298 KFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE--NGGTPQIVQMIRAALAFWVKE- 373 (625)
Q Consensus 298 K~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~--~~gt~~~~~~~~aal~~~~~~- 373 (625)
|.|+.|+ .+|++++++....+... ........ ..+.+.+.+. ++..++...
T Consensus 240 K~~~~~GlRiG~iv~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~q~--a~~~~l~~~~ 294 (401)
T TIGR01264 240 KRWLVPGWRLGWIIIHDRRGILRDI-----------------------RDGLVKLSQRILGPCTIVQG--ALPSILLRTP 294 (401)
T ss_pred ccCCCccceEEEEEecCcchhHHHH-----------------------HHHHHHHhhccCCCCcHHHH--HHHHHHHhCc
Confidence 9987665 38999987421000000 00000000 1122222221 122222110
Q ss_pred hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCe
Q 043646 374 YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGI 453 (625)
Q Consensus 374 ~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI 453 (625)
..-.+..+++.+..++++.+.|..++++.+..| .++.+.|.-.+... -....+..++++.|.+++||
T Consensus 295 ~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~~g~f~~~~~~~~~---------~~~~~~~~~~~~~l~~~~gI 361 (401)
T TIGR01264 295 QEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP----SGAMYMMVGIEMEH---------FPEFKNDVEFTERLVAEQSV 361 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC----CeeeEEEEEecccc---------cCCCCCHHHHHHHHHHhCCE
Confidence 112345556666667788888888777665444 34666666543100 00012345777777667899
Q ss_pred eeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 454 QARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 454 ~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+++|..|. .++++||+++. .+++++..++.|.+++.+
T Consensus 362 ~v~pg~~f~-----------------------------~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 362 FCLPGSCFE-----------------------------YPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred EEeCchhcC-----------------------------CCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 999887653 24899999984 578999999999887754
No 142
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=3.8e-22 Score=212.70 Aligned_cols=305 Identities=14% Similarity=0.154 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH-
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR- 199 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~- 199 (625)
...+++++.+++++|++ . .++|+ +|++ ++..++. + +++||+ |++++..|.++...|+
T Consensus 47 p~~~~le~~la~l~g~~-~-~l~~~-sG~~-al~~~l~-l---------------l~~Gd~--Vl~~~~~y~~~~~~~~~ 104 (378)
T TIGR01329 47 PTRTALESLLAKLDKAD-R-AFAFS-SGMA-ALDVITR-L---------------LNNGDE--IIAGDDLYGGTDRLLTQ 104 (378)
T ss_pred hHHHHHHHHHHHHhCCC-c-EEEEC-CHHH-HHHHHHH-H---------------hCCCCE--EEEcCCCchHHHHHHHH
Confidence 34678999999999983 2 45554 7765 6776655 3 478885 8898889988765543
Q ss_pred ---HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 200 ---QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 200 ---~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
..|++++.++.+ |+++++++++ +++++|++++++||+|.+.|+++|+++||++|+++++|++++.++
T Consensus 105 ~~~~~G~~v~~vd~~-----d~~~le~~i~-----~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~ 174 (378)
T TIGR01329 105 VVPRSGVVVVHVDTT-----DLDKVKAALG-----PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPL 174 (378)
T ss_pred HHHHcCcEEEEeCCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccc
Confidence 369999999864 8999999987 689999999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
....+ .+ ++|++++|+||+++||.+ .|+++++++.. .+.+.+... ..
T Consensus 175 ~~~~l-~~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~-~~~~~~~~~--------------------------~~ 223 (378)
T TIGR01329 175 LCNPL-EL---GADIVYHSATKFLAGHSDVMAGVLAVKGEEI-AKKVYFLQN--------------------------ST 223 (378)
T ss_pred cCChh-hc---CCcEEEEecceeccCCccceeEEEEeCcHHH-HHHHHHHHH--------------------------hc
Confidence 54444 23 789999999999998876 78888865541 112211111 01
Q ss_pred CC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCC-------------CCCCcceEEEEe
Q 043646 355 GT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNT-------------SVKRQAILSFLV 419 (625)
Q Consensus 355 gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~-------------~~~~~~i~~f~~ 419 (625)
|. .+... +. +..........+.++...++..+.++|++.|.+ +++.|. ....+++++|.+
T Consensus 224 G~~~~~~~---a~--l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~ 298 (378)
T TIGR01329 224 GSGLAPFD---CW--LLLRGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET 298 (378)
T ss_pred CCcCCHHH---HH--HHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE
Confidence 11 11111 11 111122234444555555677777777766655 233221 124678999998
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
.+.. ....++..| +.++|.++.|...+. |..-....+.++... ..|+.++.|
T Consensus 299 -~~~~--------------~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~li 353 (378)
T TIGR01329 299 -GSVA--------------LSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEVRE---------ERGLPEDLV 353 (378)
T ss_pred -CCHH--------------HHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCHHHHH---------hcCCCCCeE
Confidence 3210 145788888 678999988765431 221111222221111 256778999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 497 RITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~~~~~ 522 (625)
|||+|. ||++.+++-|++.++.
T Consensus 354 R~svGl----E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 354 RLSVGI----EDVDDLISDLDIAFVT 375 (378)
T ss_pred EEEecc----CCHHHHHHHHHHHHHh
Confidence 999996 5667777777666553
No 143
>PRK09082 methionine aminotransferase; Validated
Probab=99.90 E-value=1.5e-21 Score=209.48 Aligned_cols=341 Identities=12% Similarity=0.051 Sum_probs=224.3
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC--CCcEEEeCChHHHHHH
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ--ADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~--~~~vift~sGttaal~ 154 (625)
.+.|..+... +.++.+.+++.+.+.... . .|....+...+.+.+.+++.+++|.+. +++|++| +|++.++.
T Consensus 32 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t-~G~~~al~ 105 (386)
T PRK09082 32 AINLSQGFPDFDGPPYLVEALAYAMAAGH----N-QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVT-AGATEALF 105 (386)
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHHcCC----C-CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCHHHHHH
Confidence 3445443322 335678888877653211 1 122223456778888889988888753 2368888 78888898
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~ 233 (625)
.++..+ +++||. |+++.+.|.++...++..|++++.++++. ++.+|+++++++++ ++
T Consensus 106 ~~~~~~---------------~~~gd~--Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-----~~ 163 (386)
T PRK09082 106 AAILAL---------------VRPGDE--VIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-----PR 163 (386)
T ss_pred HHHHHH---------------cCCCCE--EEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-----cc
Confidence 888776 478885 99999999999888888999999999974 56899999999887 57
Q ss_pred CeEEEEecccCccccc---cCHHHHHHHHHHcCCEEEEeccCcCCCc----cccCCCC-CCCCCcEEEEcCCCCCCCCC-
Q 043646 234 PMLGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASGPYV----KINLRSR-NIDGYDAIFLATHKFLGGPG- 304 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~---~~l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~~-~~~~~D~v~~S~hK~lggp~- 304 (625)
++++++++++||||.+ .++++|.++|++||+++|+|++++.... ...+... ......+++.|++|.+|.|+
T Consensus 164 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~ 243 (386)
T PRK09082 164 TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGW 243 (386)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhh
Confidence 8999999999999988 4578899999999999999999653211 1112111 11134577789999998665
Q ss_pred CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHH
Q 043646 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQE 384 (625)
Q Consensus 305 g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~ 384 (625)
.+|+++.++++. ..+... ......+.+.+.+.+ +.+++.......+.+++..
T Consensus 244 RiG~iv~~~~l~--~~~~~~------------------------~~~~~~~~~~~~q~~--~~~~l~~~~~~~~~~~~~~ 295 (386)
T PRK09082 244 KVGYCVAPAALS--AEFRKV------------------------HQYNTFTVNTPAQLA--LADYLRAEPEHYLELPAFY 295 (386)
T ss_pred hhhhhhCCHHHH--HHHHHH------------------------HhhhcCCCChHHHHH--HHHHHhCChHHHHHHHHHH
Confidence 489999887762 111100 000111223333322 2233311111234455666
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 385 DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
++.++++.+.|.+. ++++..+ .++.+.+...+.. ..++..++++.|.+++||.+.+|..|...
T Consensus 296 ~~~~~~~~~~L~~~-~~~~~~~----~g~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~v~v~pg~~f~~~ 358 (386)
T PRK09082 296 QAKRDRFRAALANS-RFKLLPC----EGTYFQLVDYSAI------------SDLDDVEFCQWLTREHGVAAIPLSVFYAD 358 (386)
T ss_pred HHHHHHHHHHHHhC-CCcccCC----CeeEEEEEecccc------------CCCCHHHHHHHHHHhCCEEEeCcHHhCCC
Confidence 67788888888774 6666543 3455554443311 02346688888767789999988755310
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
+...+++||+++. ++++++..++.|++
T Consensus 359 -------------------------~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 359 -------------------------PFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred -------------------------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 0024899999984 68888888888764
No 144
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.90 E-value=2e-20 Score=201.95 Aligned_cols=342 Identities=14% Similarity=0.020 Sum_probs=220.4
Q ss_pred ceEeccCCCC-----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC------CCCCcEEEe
Q 043646 77 RLTYADHTAS-----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG------GQADAIIFC 145 (625)
Q Consensus 77 ~~~Yld~~~~-----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~------~~~~~vift 145 (625)
+.+.|..+.. .++++.+.+++.+.+.....+ .|.. ..-..++|+.++++++. +++ +|++|
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~----~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~-~ii~t 102 (403)
T TIGR01265 32 PIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN----GYAP----SVGALAAREAVAEYLSSDLPGKLTAD-DVVLT 102 (403)
T ss_pred CeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC----CCCC----CCCCHHHHHHHHHHHHhhcCCCCCHH-HEEEe
Confidence 4666666643 356788999888776432111 1111 11244577777777764 233 79998
Q ss_pred CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHH
Q 043646 146 GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRS 223 (625)
Q Consensus 146 ~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~ 223 (625)
+|+++++..++.++ .++||+ |+++.++|......++..|++++.++++. ++.+|++++++
T Consensus 103 -~G~t~al~~~~~~l---------------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 164 (403)
T TIGR01265 103 -SGCSQAIEICIEAL---------------ANPGAN--ILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEA 164 (403)
T ss_pred -cChHHHHHHHHHHh---------------CCCCCE--EEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHH
Confidence 78899999998887 367886 88999998887777788899999998754 45799999999
Q ss_pred HHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc----cccCCCCCCCCCcEEEEcC
Q 043646 224 QLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----KINLRSRNIDGYDAIFLAT 296 (625)
Q Consensus 224 ~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~~~~~~~D~v~~S~ 296 (625)
++. ++++++++++++||||.+.+ +++|.++|+++|+++|+|++++.-.. ...+..+..+.--+++.|+
T Consensus 165 ~~~-----~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 239 (403)
T TIGR01265 165 LAD-----EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGI 239 (403)
T ss_pred HhC-----cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeec
Confidence 886 57899999999999999976 78899999999999999999653211 1122222111113566799
Q ss_pred CCCCCCCC-CceEEEEec--cccc---cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHH
Q 043646 297 HKFLGGPG-TPGILLISK--ALYQ---LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFW 370 (625)
Q Consensus 297 hK~lggp~-g~G~l~v~~--~~~~---l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~ 370 (625)
+|.|+.|+ .+|++++.+ .+.. +..+.. ......+.+.+.+ .++..+
T Consensus 240 SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~q---~~~~~~ 291 (403)
T TIGR01265 240 SKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN-------------------------LLQRILGPATIVQ---GALPDI 291 (403)
T ss_pred ccccCCCcceEEEEEEeCchhhhHHHHHHHHHH-------------------------HhhhhcCCChHHH---HHHHHH
Confidence 99988775 489998853 2200 000000 0000112222222 222222
Q ss_pred HHh--hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhh
Q 043646 371 VKE--YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFN 448 (625)
Q Consensus 371 ~~~--~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~ 448 (625)
+.+ ..-++..+++.++.++++.+.|..++++++..|. ++.+.+...+... -....+..++++.|.
T Consensus 292 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~----~g~f~~~~~~~~~---------~~~~~~~~~~~~~l~ 358 (403)
T TIGR01265 292 LENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPE----GAMYLMVKLELEL---------FPEIKDDVDFCEKLV 358 (403)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCC----ceeEEEEeccccc---------cCCCCCHHHHHHHHH
Confidence 211 1123455556666678888899887777755442 3555554443210 000123567878776
Q ss_pred hhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 449 DLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 449 ~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+++||.+++|..|+ .++++||+++. .++.++..++.|.+++.+
T Consensus 359 ~~~gv~v~pg~~f~-----------------------------~~~~iRis~~~--~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 359 REESVICLPGSAFG-----------------------------LPNWVRITITV--PESMLEEACSRIKEFCER 401 (403)
T ss_pred HhCCEEEeCccccC-----------------------------CCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 77899999988664 14899999983 577888888888877643
No 145
>PLN02452 phosphoserine transaminase
Probab=99.89 E-value=3.2e-21 Score=203.13 Aligned_cols=343 Identities=13% Similarity=0.125 Sum_probs=233.7
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCC--CCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYG--NTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRL 156 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~--n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l 156 (625)
.|+=.++-...|+.|++++.+.+..+.+ -.....++.+..+.++++++++.++++++.+.+.+|+|..+|.|.++..+
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~ 87 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAI 87 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHH
Confidence 4444555567889999999887754321 11112345677889999999999999999865556776656777778877
Q ss_pred HHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH--HHHHHcCCeEEEEecCCCC---CCCHHHHHHHHHHhhhC
Q 043646 157 QEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL--LSWRQSLAEVVEIGLDDNG---LLDIEALRSQLELYKAA 231 (625)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~~---~ld~~~L~~~l~~~~~~ 231 (625)
...+ +.+|++ +++......+.. ...+..|...+........ .++++++ +.+
T Consensus 88 ~~nl---------------~~~~~~--~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~--- 143 (365)
T PLN02452 88 PLNL---------------CKPGDK--ADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT--- 143 (365)
T ss_pred HHhc---------------CCCCCe--EEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC---
Confidence 7765 567776 443333444432 2244567644444222222 4666654 211
Q ss_pred CCCeEEEEecccCcccc-ccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEE
Q 043646 232 KRPMLGSFSACSNVTGI-YSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILL 310 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~-~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~ 310 (625)
+..+.|.++|..+.||+ +.|++++.+ +++++|+++++++.++|+.++ ++| ++|.||.+| |.|+|+++
T Consensus 144 ~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~~~---~v~--~~saqK~lG-P~Gl~~v~ 211 (365)
T PLN02452 144 PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVSKY---GVI--YAGAQKNVG-PSGVTIVI 211 (365)
T ss_pred CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHHHc---CEE--EEecccccC-CCCeEEEE
Confidence 46899999999999999 488887753 899999999999999999987 554 469999996 99999999
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
+++++ ++...+... ...++ ..+ .......+||++..+. .++++++. +..|.+.+.+|+++++
T Consensus 212 vr~~~--l~~~~~~~~--~~~~~--------~~~---~~~~s~~~TP~v~~i~~l~~aL~~l~-~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 212 IRKDL--IGNARPITP--GMLDY--------KIH---AENDSLYNTPPCFGIYMCGLVFEDLL-AQGGLKAMEKRNIRKA 275 (365)
T ss_pred EcHHH--HhhcccCCC--chhhH--------HHH---HhcCCccCChhHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHH
Confidence 99998 444332211 01000 000 0112334799988875 46677663 2348999999999999
Q ss_pred HHHHHhhCCCCcEEEeCC-CC-C-CCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh
Q 043646 389 ESALGRILPNQNIQVLGN-TS-V-KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY 465 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~-~~-~-~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~ 465 (625)
+++++.|.+++|+ +.+ .+ . .+..+++|.+.... ....+.+.+. +.|+..-.|...
T Consensus 276 ~~l~~~l~~~~G~--y~~~~~~~~rs~~~vsF~~~~~~---------------~~~~f~~~~~-~~g~~~~~G~r~---- 333 (365)
T PLN02452 276 DLLYDAIDESNGF--YVCPVEKSVRSLMNVPFTLGGSE---------------LEAEFVKEAA-KAGMVQLKGHRS---- 333 (365)
T ss_pred HHHHHHHHhCCCc--ccCCCChHHhCCeEEEEEcCCch---------------hHHHHHHHHH-HCCCcccCCccc----
Confidence 9999999988777 222 21 2 34458888874321 2456777774 478887655321
Q ss_pred hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 466 GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 466 ~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+ |.+|+|+-..++.++++.|++.+++..++
T Consensus 334 -------------------------~--gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 334 -------------------------V--GGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred -------------------------c--CceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1 33999998889999999999999987654
No 146
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.89 E-value=9.3e-21 Score=201.54 Aligned_cols=326 Identities=14% Similarity=-0.006 Sum_probs=211.8
Q ss_pred ceEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+.. .++|+.+.+++.+.+......+. .. ..++|+.|+++++++++ +|++| +|++++|..
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~----------~~-~~~Lr~aia~~~~v~~~-~I~it-~G~~~~i~~ 89 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSALRHYPD----------PD-YRELRLALAQHHQLPPE-WILPG-NGAAELLTW 89 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCC----------cC-HHHHHHHHHHHhCcChh-hEEEC-CCHHHHHHH
Confidence 4566765533 45667888888765532111111 01 24688899999998877 89998 899999998
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCC-----CCHHHHHHHHHHhhh
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGL-----LDIEALRSQLELYKA 230 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~-----ld~~~L~~~l~~~~~ 230 (625)
++.++ .+|++ |+++.+.|+.+...++..|++++.++++.++. .+++.+++..
T Consensus 90 ~~~~l----------------~~g~~--vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----- 146 (360)
T PRK07392 90 AGREL----------------AQLRA--VYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----- 146 (360)
T ss_pred HHHHh----------------CCCCe--EEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-----
Confidence 88765 35664 88899999999888999999999999976443 3455554332
Q ss_pred CCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc---ccC-CCCCCCCCcEEEEcCCCCCCCCC-C
Q 043646 231 AKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK---INL-RSRNIDGYDAIFLATHKFLGGPG-T 305 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~---id~-~~~~~~~~D~v~~S~hK~lggp~-g 305 (625)
.+++++++++++||||.+.+.++|.++++++++ +++|+++.--... ... .......--+++.|++|.|+.|+ .
T Consensus 147 -~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlR 224 (360)
T PRK07392 147 -TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLR 224 (360)
T ss_pred -cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchh
Confidence 368999999999999999999999999999985 6669996522110 010 00110111366679999998554 4
Q ss_pred ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHH
Q 043646 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQED 385 (625)
Q Consensus 306 ~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~ 385 (625)
+|++++++++. +.+.... ...+.+.+.+ .++..++.+..-.+...++.+
T Consensus 225 iG~~v~~~~~~--~~~~~~~--------------------------~~~~~s~~~q---~~~~~~l~~~~~~~~~~~~~~ 273 (360)
T PRK07392 225 LGYAIAHPDRL--QRWQQWR--------------------------DPWPVNGLAA---AAAIAALADRDFQQQTWAWLP 273 (360)
T ss_pred eeeeeCCHHHH--HHHHhhC--------------------------CCCCCCHHHH---HHHHHHhccHHHHHHHHHHHH
Confidence 89999887762 2211000 0011222222 111222212111233445566
Q ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchh
Q 043646 386 VYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPY 465 (625)
Q Consensus 386 ~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~ 465 (625)
..++++.+.|+.++++.+..+ .+.+.+.-.+. +..++++.+.+++||.+++|..++..
T Consensus 274 ~~r~~l~~~L~~~~~~~~~~~-----~~~fl~~~~~~----------------~~~~l~~~ll~~~gv~v~pg~~f~~~- 331 (360)
T PRK07392 274 PAREALFQGLASLPGLTPLPS-----AANFLLVQSQG----------------SALQLQEKLLQQHRILIRDCLSFPEL- 331 (360)
T ss_pred HHHHHHHHHHHhCCCcEECCC-----CCCEEEEEcCC----------------CHHHHHHHHHhhCCEEEEeCCCCCCC-
Confidence 677888899988888876532 24444433221 24577777656689999998866411
Q ss_pred hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 466 GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 466 ~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++||+++ +.++.+++.++|+.+.++
T Consensus 332 --------------------------~~~~iRi~~~---~~~~~~~l~~al~~~~~~ 359 (360)
T PRK07392 332 --------------------------GDRYFRVAVR---TEAENQRLLEALAAILAN 359 (360)
T ss_pred --------------------------CCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence 2489999998 677889999999887654
No 147
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=3.4e-21 Score=207.87 Aligned_cols=163 Identities=19% Similarity=0.174 Sum_probs=132.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+++++.++++.|+.. .++|+| .+++++.++.++ +++||+ ||+++.+|.+.
T Consensus 58 y~R~~~p~~~~le~~lA~l~g~~~---av~~sS-Gt~Al~~al~~l---------------l~~Gd~--Vi~~~~~y~~t 116 (433)
T PRK08134 58 YSRISNPTVAVLEERVAALEGGVG---AIATAS-GQAALHLAIATL---------------MGAGSH--IVASSALYGGS 116 (433)
T ss_pred eecCcChHHHHHHHHHHHHhCCCc---EEEeCC-HHHHHHHHHHHH---------------hCCCCE--EEEeCCccHHH
Confidence 334444568889999999999863 477745 455677766655 478885 99999999876
Q ss_pred HHHH----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
...+ ...|+++++++.+ |+++++++|+ ++|++|++++++||+|.+.|+++|+++||++|+++++|+
T Consensus 117 ~~~~~~~l~~~Gi~v~~vd~~-----d~~~l~~~i~-----~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~ 186 (433)
T PRK08134 117 HNLLHYTLRRFGIETTFVKPG-----DIDGWRAAIR-----PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDS 186 (433)
T ss_pred HHHHHHHHhhCCeEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEEC
Confidence 5544 3469999999875 7999999998 689999999999999999999999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEe
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLIS 312 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~ 312 (625)
+++.|+...++ .+ ++|++++|.|||++|++. +|.+++.
T Consensus 187 t~a~~~~~~pl-~~---GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 187 TFTTPYLLRPF-EH---GADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred CCcccccCCch-hc---CCCEEEeccccccCCCCCceEEEEEe
Confidence 99998876555 44 899999999999997764 5666553
No 148
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.89 E-value=3e-20 Score=200.76 Aligned_cols=367 Identities=13% Similarity=0.055 Sum_probs=226.9
Q ss_pred hHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCC-----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHH
Q 043646 51 SEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTAS-----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHE 125 (625)
Q Consensus 51 ~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~-----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~ 125 (625)
....+..+++.+... ..++.+.|..+.. .++|+.+.+++.+.+... ....|....+..++.+.
T Consensus 15 ~~~~~~~~~~~~~~~--------~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~----~~~~Y~~~~G~~~lr~a 82 (409)
T PLN00143 15 IDDAVKFLKENFNED--------DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA----KFNSYAPTGGILPARRA 82 (409)
T ss_pred HHHHHHHHHHhcccC--------CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc----CCCCCCCCCCCHHHHHH
Confidence 566677777754221 0145666665555 478889999988876421 10012111223344444
Q ss_pred HHHHHHHHhC--CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC
Q 043646 126 ASNYIKRCLG--GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA 203 (625)
Q Consensus 126 ~~~~ia~~~g--~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (625)
+.+++.+..| .+++ +|++| +|+++++..++.++ +++||+ |+++.+.|+.+....+..|+
T Consensus 83 ia~~~~~~~g~~~~~~-~I~it-~G~~~al~~~~~~l---------------~~~gd~--v~v~~P~y~~~~~~~~~~g~ 143 (409)
T PLN00143 83 IADYLSNDLPYQLSPD-DVYLT-LGCKHAAEIIIKVL---------------ARPEAN--ILLPRPGFPDVETYAIFHHL 143 (409)
T ss_pred HHHHHHhhcCCCCCHh-hEEEe-cChHHHHHHHHHHH---------------cCCCCE--EEEcCCCCcCHHHHHHHcCC
Confidence 5555544434 3444 89998 89999999998887 578886 99999999998878888999
Q ss_pred eEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc-
Q 043646 204 EVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV- 277 (625)
Q Consensus 204 ~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~- 277 (625)
+++.++++. +..+|+++|+++++ ++++++++++|+||||.+.+ +++|+++|++|++++++|+++..-..
T Consensus 144 ~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~ 218 (409)
T PLN00143 144 EIRHFDLLPEKGWEVDLDAVEAIAD-----ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFG 218 (409)
T ss_pred EEEEEeccCCCCCcCCHHHHHHhcc-----cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccC
Confidence 999999853 34689999998876 57899999999999999988 66788889999999999999653111
Q ss_pred --c-ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEe-ccccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 278 --K-INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLIS-KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 278 --~-id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
+ ..+........-+++.|++|.|+.|+ .+|+++++ +... ++... . ...+....
T Consensus 219 ~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~-~~~~~-~--------------------~~~~~~~~ 276 (409)
T PLN00143 219 SKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGL-LQICE-I--------------------ADSIKKAL 276 (409)
T ss_pred CCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhh-hhhHH-H--------------------HHHHHHHH
Confidence 1 11111111112366779999988775 48999984 3210 11000 0 00000000
Q ss_pred --cCCChhHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 353 --NGGTPQIVQMIRAALAFWVKE--YIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 353 --~~gt~~~~~~~~aal~~~~~~--~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
....+.+.+ .++..++.+ ....+...++.+...+++.+.|.++++...... ..++.+.|...+...
T Consensus 277 ~~~~~~~~~~q---~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~---p~gg~f~w~~l~~~~---- 346 (409)
T PLN00143 277 NPAPFPPTFIQ---AAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQK---AEGAFFALVKLNLLL---- 346 (409)
T ss_pred hccCCCCchHH---HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC---CCeeEEEEEecchhh----
Confidence 011112222 222222211 112445556666667778888877654332211 234666665543200
Q ss_pred cccccCCCCC-ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 429 NMKIERNKPL-HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 429 ~~~~~~~~~l-~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
-.++ +..+++..+..++||.+++|..|+ .++++||+++ .+++
T Consensus 347 ------~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------------~~~~iRi~~~--~~~~ 389 (409)
T PLN00143 347 ------LEDIEDDMEFCLKLAKEESLIILPGVTVG-----------------------------LKNWLRITFA--VEQS 389 (409)
T ss_pred ------cCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------------CCCeEEEEEc--CCHH
Confidence 0011 244565555566899999997663 2489999998 4689
Q ss_pred HHHHHHHHHHHHHHh
Q 043646 508 EFEFILAALEFIAAY 522 (625)
Q Consensus 508 did~ll~aL~~~~~~ 522 (625)
+++..++.|++++..
T Consensus 390 ~l~~al~rl~~~l~~ 404 (409)
T PLN00143 390 SLEDGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887753
No 149
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=3.7e-21 Score=202.95 Aligned_cols=299 Identities=18% Similarity=0.144 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH
Q 043646 119 MTKMVHEASNYIKRCLGGGQ-ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS 197 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~~~-~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~ 197 (625)
..++.+.+.+.+...++... .++++++ +|+++++..++.++ ..+|++ |+++...|+++...
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~-~~~t~a~~~~~~~~---------------~~~g~~--vl~~~~~~~~~~~~ 99 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEEIVVT-NGAQEALSLLLRAL---------------LNPGDE--VLVPDPTYPGYEAA 99 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcceEEEe-cCcHHHHHHHHHHh---------------CCCCCE--EEEcCCCchhHHHH
Confidence 34455555555555554211 2278887 78888888888877 356775 99999999999999
Q ss_pred HHHcCCeEEEEecCCCCCCCH--HHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHH---HHHHHHcCCEEEEeccC
Q 043646 198 WRQSLAEVVEIGLDDNGLLDI--EALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSI---ARLLHQYGGFACFDFAA 272 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~--~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I---~~la~~~g~~vivD~A~ 272 (625)
++..|++++.++.++++..+. +.++..+. +++++|++++++|+||.+.|++++ .++|+++|+++++|+|+
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~ 174 (350)
T cd00609 100 ARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-----PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAY 174 (350)
T ss_pred HHHCCCEEEEEecccccCCccCHHHHHhhcC-----ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecch
Confidence 999999999999987766555 55555443 689999999999999999986655 48999999999999998
Q ss_pred cCCCccc-cC---CCCCCCCCcEEEEcCCCCCC-CCCCceEEEEec-cccccCCCCCcccCCceEEeecccccccccccc
Q 043646 273 SGPYVKI-NL---RSRNIDGYDAIFLATHKFLG-GPGTPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 273 ~~g~~~i-d~---~~~~~~~~D~v~~S~hK~lg-gp~g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
+.+...- .. ......+.|+++.|+||+++ ++.++|++++++ .+. +.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~--~~~~~----------------------- 229 (350)
T cd00609 175 AELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL--ERLKK----------------------- 229 (350)
T ss_pred hhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH--HHHHH-----------------------
Confidence 7643211 10 11122367899999999997 344589999988 552 11110
Q ss_pred chhhhhcCCChhHHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCC
Q 043646 347 DIEERENGGTPQIVQMIRAALAFWVKEY-IGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNS 425 (625)
Q Consensus 347 ~~~~~~~~gt~~~~~~~~aal~~~~~~~-~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~ 425 (625)
..+...++++....... ..+++.. .+.+.+.++.+.+++++.+.|.+++...+..+ ..+.+.+...+..
T Consensus 230 --~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~g~~~~~~~~~~-- 299 (350)
T cd00609 230 --LLPYTTSGPSTLSQAAA--AAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKP----SGGFFLWLDLPEG-- 299 (350)
T ss_pred --HHHhcccCCChHHHHHH--HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC----CccEEEEEecCCC--
Confidence 11122234444433222 2222121 45778888889999999999988755543222 3355555443321
Q ss_pred CCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCC
Q 043646 426 SPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMS 505 (625)
Q Consensus 426 ~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t 505 (625)
.+...+.++| .++||.++.+..+.. ..+.++||+++..
T Consensus 300 ------------~~~~~~~~~l-~~~gi~i~~~~~~~~---------------------------~~~~~iRi~~~~~-- 337 (350)
T cd00609 300 ------------DDEEFLERLL-LEAGVVVRPGSAFGE---------------------------GGEGFVRLSFATP-- 337 (350)
T ss_pred ------------ChHHHHHHHH-HhCCEEEeccccccc---------------------------CCCCeEEEEeeCC--
Confidence 1244566666 558999987765531 0257899999877
Q ss_pred HHHHHHHHHHHH
Q 043646 506 NEEFEFILAALE 517 (625)
Q Consensus 506 ~edid~ll~aL~ 517 (625)
.+|+++++++|+
T Consensus 338 ~~~i~~~~~al~ 349 (350)
T cd00609 338 EEELEEALERLA 349 (350)
T ss_pred HHHHHHHHHHhh
Confidence 999999999986
No 150
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=7.3e-21 Score=203.13 Aligned_cols=323 Identities=17% Similarity=0.050 Sum_probs=210.4
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+... .+++.+.+++.+........+.. .. .++++++++++|++++ +|++| +|+++++..
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~----------~g-~~lr~~ia~~~~~~~~-~i~~t-~G~~~~l~~ 103 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDP----------QG-RALREAIAARTGVPAD-RIILG-NGSEDLIAV 103 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCC----------cH-HHHHHHHHHHhCcCHH-HEEEc-CCHHHHHHH
Confidence 45666654332 34567777776543221111111 01 2588899999998766 89998 899999999
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
++.++ +++||. |++..+.|+.....++..|++++.++.+.++.+|+++++++++ ++++
T Consensus 104 ~~~~~---------------~~~gd~--vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-----~~~~ 161 (371)
T PRK05166 104 ICRAV---------------LRPGDR--VVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-----RAPR 161 (371)
T ss_pred HHHHh---------------cCCCCE--EEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-----cCCC
Confidence 88876 578885 8889899988877778889999999998778899999999887 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHH--cCCEEEEeccCcCCCcc---ccC-CCCC-CCCCcEEEEcCCCCCCCCC-Cce
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVK---INL-RSRN-IDGYDAIFLATHKFLGGPG-TPG 307 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~--~g~~vivD~A~~~g~~~---id~-~~~~-~~~~D~v~~S~hK~lggp~-g~G 307 (625)
+|++++++||||.+.+.+++.++++. +++++++|+++..-... ... .... ...--+++.|++|.||.|+ .+|
T Consensus 162 ~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG 241 (371)
T PRK05166 162 MLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVG 241 (371)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhhee
Confidence 99999999999999998877777764 48899999996521110 010 0000 0012367789999998554 489
Q ss_pred EEEEe-ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q 043646 308 ILLIS-KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDV 386 (625)
Q Consensus 308 ~l~v~-~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~ 386 (625)
++++. +.+. +.+.... ...+.+.+.+ .+++..+. +....+...+..+.
T Consensus 242 ~~i~~~~~l~--~~~~~~~--------------------------~~~~~~~~~q--~~~~~~l~-~~~~~~~~~~~~~~ 290 (371)
T PRK05166 242 YGLVSDPELV--GLLDRVR--------------------------TPFNVNGAAQ--AAALAALD-DEEHLAKGVALALA 290 (371)
T ss_pred eeecCCHHHH--HHHHHhc--------------------------cCCCCCHHHH--HHHHHHhc-CHHHHHHHHHHHHH
Confidence 98874 4441 1110000 0011222222 12222221 22224455556666
Q ss_pred HHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhh
Q 043646 387 YIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYG 466 (625)
Q Consensus 387 l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~ 466 (625)
.++++.+.|++. ++.+..+ . +.+.+.-.+. +..++++.|.+ +||.+++|..++
T Consensus 291 ~r~~l~~~L~~~-g~~~~p~----~-g~fl~~~~~~----------------~~~~l~~~l~~-~gi~v~p~~~~~---- 343 (371)
T PRK05166 291 ERERLKKELAEM-GYRIAPS----R-ANFLFFDARR----------------PASAVAEALLR-QGVIVKPWKQPG---- 343 (371)
T ss_pred HHHHHHHHHHHC-cCeeCCC----c-CCEEEEeCCC----------------CHHHHHHHHHH-CCeEEecCCCCC----
Confidence 677888888876 6665322 2 3333332211 24678888866 699999875321
Q ss_pred HhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 467 HTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 467 ~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.++++||+++ +.++.++++++|+.+.
T Consensus 344 -------------------------~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 344 -------------------------FETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred -------------------------CCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2489999998 7888999999998764
No 151
>PRK07550 hypothetical protein; Provisional
Probab=99.89 E-value=7.8e-21 Score=204.09 Aligned_cols=328 Identities=12% Similarity=0.009 Sum_probs=212.9
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
+++.+.+++.+.+.. .+...|....+..++.+.+.+++.+..|. +++ +|++| +|+++++..++.++
T Consensus 43 ~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~al~~~~~~l------ 110 (386)
T PRK07550 43 PPPELLRALAEAAAD----PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPE-QVHIT-SGCNQAFWAAMVTL------ 110 (386)
T ss_pred CCHHHHHHHHHHHhC----cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEe-cCcHHHHHHHHHHh------
Confidence 456777777665531 11111211223456666677777776664 344 89998 78898899988887
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
+++||+ |+++.+.|......++..|++++.++.++ ++.+|+++|+++++ .++++|++++++|
T Consensus 111 ---------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-----~~~~~v~~~~P~N 174 (386)
T PRK07550 111 ---------AGAGDE--VILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-----PRTRAIALVTPNN 174 (386)
T ss_pred ---------cCCCCE--EEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-----ccCcEEEEeCCCC
Confidence 478886 99999999888778888999999999974 34689999999987 4789999999999
Q ss_pred ccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc----cccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccc
Q 043646 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----KINLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKAL 315 (625)
Q Consensus 245 ~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~ 315 (625)
|||.+.+ +++|+++|++||+++|+|++++.... +...... ....-.+++.|++|.+|.|+ .+|+++.++++
T Consensus 175 PtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~ 254 (386)
T PRK07550 175 PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPAR 254 (386)
T ss_pred CCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHH
Confidence 9999987 67899999999999999999653211 1111000 00112356789999998554 48999988776
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
. ..+.... .....+.+.+.+.+ ..++.-. ....+..+++.++.++++.+.
T Consensus 255 ~--~~~~~~~------------------------~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~ 305 (386)
T PRK07550 255 I--AEIEKFM------------------------DTVAICAPRIGQIAVAWGLPNL---ADWRAGNRAEIARRRDAFRAV 305 (386)
T ss_pred H--HHHHHHH------------------------hhcccCCCcHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHH
Confidence 2 1111000 00011222222221 1111110 111234455566677788888
Q ss_pred hCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCCh
Q 043646 395 ILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474 (625)
Q Consensus 395 L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~ 474 (625)
|...+++.+. + .++.+.+...+. .+++..++++.|.+++||.+++|..++..
T Consensus 306 L~~~~~~~~~-~----~g~~~~~~~~~~-------------~~~~~~~l~~~l~~~~gv~v~pg~~f~~~---------- 357 (386)
T PRK07550 306 FARLPGWELL-A----SGAYFAYVRHPF-------------PDRPSREVARRLAKEAGILCLPGTMFGPG---------- 357 (386)
T ss_pred HHhCCCceeC-C----CceEEEEecCCC-------------CCCCHHHHHHHHHHhcCEEEeCchhhCCC----------
Confidence 8776565543 2 234555544432 02346788888767789999998765310
Q ss_pred hhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 475 ~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..+++||+++. .++++++.+++.|.++
T Consensus 358 -----------------~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 358 -----------------QEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred -----------------CCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 24799999974 4689999999998764
No 152
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=8.4e-22 Score=209.03 Aligned_cols=283 Identities=14% Similarity=0.038 Sum_probs=192.6
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCC-CceEEEEcCCCCchhHHHHHHcC
Q 043646 124 HEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDE-ERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
.++++.+++++|++++ +|++| +|++++|..++.++ .++| |+ |+++.+.|+.+...++..|
T Consensus 63 ~~Lr~aia~~~~~~~~-~I~it-~Gs~~~i~~~~~~~---------------~~~g~d~--vlv~~P~y~~y~~~~~~~g 123 (354)
T PRK04635 63 PELINAYSAYAGVAPE-QILTS-RGADEAIELLIRAF---------------CEPGQDS--IACFGPTYGMYAISAETFN 123 (354)
T ss_pred HHHHHHHHHHhCcCHH-HEEEe-CCHHHHHHHHHHHh---------------cCCCCCe--EEEcCCChHHHHHHHHHcC
Confidence 4588999999999887 89998 89999999999887 4677 64 8888889888877788889
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc-CCEEEEeccCcCCCccccC
Q 043646 203 AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGPYVKINL 281 (625)
Q Consensus 203 ~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~-g~~vivD~A~~~g~~~id~ 281 (625)
++++.+|++.++.+|++.+++ + +++++|++++|+||||.+.+.+++.++++.. ++++++|+++.-......+
T Consensus 124 ~~v~~v~~~~~~~~~~~~l~~-~------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~ 196 (354)
T PRK04635 124 VGVKALPLTADYQLPLDYIEQ-L------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSV 196 (354)
T ss_pred CEEEEEecCCCCCCCHHHHHh-c------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcch
Confidence 999999998777889988862 2 3799999999999999999999999999873 7999999996432111111
Q ss_pred CCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH
Q 043646 282 RSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359 (625)
Q Consensus 282 ~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 359 (625)
..+ ....--+++.|++|++|.|+ .+|++++++++. +.+...... .+.+..
T Consensus 197 ~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~--~~l~~~~~~--------------------------~~~~~~ 248 (354)
T PRK04635 197 ADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI--EILMRVIAP--------------------------YPVPLP 248 (354)
T ss_pred HHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH--HHHHhhcCC--------------------------CCCCHH
Confidence 011 00011256679999997443 389999988773 222111100 111222
Q ss_pred HHHHHHHHHHHHHhhcCHHHH---HHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCC
Q 043646 360 VQMIRAALAFWVKEYIGYEVI---KKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNK 436 (625)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i---~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~ 436 (625)
.+ .++++++ +..+.+.+ .++....++++.+.|+++++++++.+. +.+.+.-.+
T Consensus 249 ~~--~~a~~~l--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-----g~f~~~~~~--------------- 304 (354)
T PRK04635 249 VS--EIATQAL--SEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-----GNYVLAKFD--------------- 304 (354)
T ss_pred HH--HHHHHHH--hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-----CcEEEEECC---------------
Confidence 22 2233333 22333333 334455568888999888767776542 223222222
Q ss_pred CCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 043646 437 PLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516 (625)
Q Consensus 437 ~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL 516 (625)
+..++.+.|. ++||.++.+.... .++++|||++ +.+|+++++++|
T Consensus 305 --~~~~~~~~l~-~~gv~v~~~~~~~-----------------------------~~~~lRis~~---~~e~~~~l~~al 349 (354)
T PRK04635 305 --DVDAVFKALW-DAGIVARAYKDPR-----------------------------LANCIRFSFS---NRAETDKLIGLI 349 (354)
T ss_pred --CHHHHHHHHH-HCCEEEEECCCCC-----------------------------CCCeEEEEeC---CHHHHHHHHHHH
Confidence 1456777774 5899998432100 2479999987 899999999999
Q ss_pred HHH
Q 043646 517 EFI 519 (625)
Q Consensus 517 ~~~ 519 (625)
++.
T Consensus 350 ~~~ 352 (354)
T PRK04635 350 RNQ 352 (354)
T ss_pred HHh
Confidence 864
No 153
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.89 E-value=6.4e-21 Score=205.22 Aligned_cols=341 Identities=13% Similarity=0.047 Sum_probs=215.4
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC----CCCCcEEEeCChHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG----GQADAIIFCGAGTTA 151 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~----~~~~~vift~sGtta 151 (625)
..+.|+.+... .+|+.+.+++.+.+......+. ..+..++.+.+.+++.+.+|. +++++|++| +|+++
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it-~Ga~~ 101 (393)
T TIGR03538 29 PPIALSIGEPKHPTPAFVLEALRENLHGLSTYPT------TKGLPELRQAIARWLERRFDLPTGVDPERHVLPV-NGTRE 101 (393)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCC------CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEEC-CCcHH
Confidence 45566554433 4567888888776532211111 122344555556666555454 343368887 89999
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhh
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYK 229 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~ 229 (625)
+|..++.++ ++|||+..|+++.+.|+.+....+..|++++.++++++ ..+|++++++++.
T Consensus 102 al~~~~~~l---------------~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--- 163 (393)
T TIGR03538 102 ALFAFAQAV---------------INPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW--- 163 (393)
T ss_pred HHHHHHHHH---------------cCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---
Confidence 999998887 57888545889999998887778888999999999643 4689999998886
Q ss_pred hCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc-----cccC----CCCCC--CCCcEEEEc
Q 043646 230 AAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-----KINL----RSRNI--DGYDAIFLA 295 (625)
Q Consensus 230 ~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~-----~id~----~~~~~--~~~D~v~~S 295 (625)
.+++++++++++||||.+.+ +++|+++|++||+++++|+++..-.. +... ..... ..--+++.|
T Consensus 164 --~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 164 --RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred --hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 47899999999999999988 67888899999999999999653211 1110 00100 011267789
Q ss_pred CCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh
Q 043646 296 THKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY 374 (625)
Q Consensus 296 ~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~ 374 (625)
++|.++.|+ .+|+++.++++. ..+... ......+.+.+.+.+ ++..+ ...
T Consensus 242 ~SK~~~~~GlRvG~~i~~~~l~--~~~~~~------------------------~~~~~~~~~~~~q~~--~~~~l-~~~ 292 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGDAEIL--KAFLRY------------------------RTYHGCAMPIPTQLA--SIAAW-NDE 292 (393)
T ss_pred chhhcCCcccceEEEecCHHHH--HHHHHH------------------------HHhhccCcCHHHHHH--HHHHh-cCh
Confidence 999877665 489999887762 111000 000011222222221 12222 111
Q ss_pred cCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCee
Q 043646 375 IGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQ 454 (625)
Q Consensus 375 ~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~ 454 (625)
...+..+++.++.++.+.+.|.+. +.+..+ .++.+.|.-.+. +..++++.|.+++||.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p----~gg~f~~~~~~~----------------~~~~~~~~l~~~~gV~ 350 (393)
T TIGR03538 293 QHVRENRALYREKFAAVLEILGQV--LDLELP----DAGFYLWPKVPG----------------DDEAFARALYEEENVT 350 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--CcccCC----CeeEEEEEECCC----------------CHHHHHHHHHHHCCEE
Confidence 224455556666677777777653 223222 345555555431 2457887776678999
Q ss_pred eecCCCCCchh-hHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 455 ARGGCACAGPY-GHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 455 v~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
+.+|..|.... +.. ...+++||++.. ++++++..+++|+++
T Consensus 351 v~pg~~f~~~~~~~~----------------------~~~~~~Ris~~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 351 VLPGRFLAREAEGVN----------------------PGEGRVRIALVA--PLEECVEAAERIRSF 392 (393)
T ss_pred EeCCccccccccCCC----------------------CCCCEEEEEecC--CHHHHHHHHHHHHHh
Confidence 99998764210 000 024799999974 678899888888754
No 154
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=1.7e-20 Score=198.87 Aligned_cols=310 Identities=16% Similarity=0.060 Sum_probs=205.2
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
.|+.+.+++.+.+......|. . ...++|+.++++++.+++ +|++| +|+++++..++.++
T Consensus 33 ~p~~~~~a~~~~~~~~~~Y~~----------~-~~~~lr~~ia~~~~~~~~-~i~it-~Ga~~~l~~~~~~~-------- 91 (354)
T PRK06358 33 VPESLKQAITENLDKLVEYPD----------P-DYLELRKRIASFEQLDLE-NVILG-NGATELIFNIVKVT-------- 91 (354)
T ss_pred CCHHHHHHHHHHHHhhhcCCC----------c-cHHHHHHHHHHHhCCChh-hEEEC-CCHHHHHHHHHHHh--------
Confidence 367888888776532111111 1 145789999999999877 89998 89999999888765
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAAKRPMLGSFSACSNVT 246 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T 246 (625)
.+ ++ |++..+.|+.+...++..|++++.++++.+ ..+| +++.+.+. .+++++++++|+|||
T Consensus 92 --------~~-~~--v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-----~~~~~v~~~~P~NPt 154 (354)
T PRK06358 92 --------KP-KK--VLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-----EEIDLVFLCNPNNPT 154 (354)
T ss_pred --------CC-Cc--EEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-----cCCCEEEEeCCCCCC
Confidence 23 33 888888988888888889999999998753 3678 56655554 468999999999999
Q ss_pred ccccC---HHHHHHHHHHcCCEEEEeccCcCCCc---ccc-CCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEe-ccccc
Q 043646 247 GIYSD---TRSIARLLHQYGGFACFDFAASGPYV---KIN-LRSRNIDGYDAIFLATHKFLGGPG-TPGILLIS-KALYQ 317 (625)
Q Consensus 247 G~~~~---l~~I~~la~~~g~~vivD~A~~~g~~---~id-~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~-~~~~~ 317 (625)
|.+.+ +++|.++|++||+++++|+++.--.. +.. +.......--+++.|++|.||.|+ .+|+++++ +.+.
T Consensus 155 G~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~- 233 (354)
T PRK06358 155 GQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA- 233 (354)
T ss_pred CCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHH-
Confidence 99987 67788889999999999999642111 011 111111112366779999998554 48999885 3441
Q ss_pred cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 318 LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
..+.... ...+.+... +.+...++.+..-.+...+..+..++++.+.|.+
T Consensus 234 -~~~~~~~---------------------------~~~~~~~~~--q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 283 (354)
T PRK06358 234 -EKLLQMR---------------------------EPWSINTFA--DLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSE 283 (354)
T ss_pred -HHHHHhC---------------------------CCCcchHHH--HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1110000 011112111 1111222111111244556666778889999988
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
++++.+..+. +.+.+.-.++ ..++.+.|.+ +||.+++|..+.+
T Consensus 284 ~~~~~~~~~~-----g~f~~~~~~~-----------------~~~~~~~l~~-~gI~v~~~~~f~~-------------- 326 (354)
T PRK06358 284 FKGIKVYKPS-----VNFIFFKLEK-----------------PIDLRKELLK-KGILIRSCSNYRG-------------- 326 (354)
T ss_pred CCCcEEcCCc-----ceEEEEEcCc-----------------hHHHHHHHHH-CCeEEEECCCCCC--------------
Confidence 8887776552 3343333321 3578888865 7999999876631
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
..++++||+++ +++++++|+++|+.++
T Consensus 327 -------------~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 327 -------------LDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred -------------CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 02489999998 8999999999998765
No 155
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=7.8e-22 Score=208.91 Aligned_cols=284 Identities=14% Similarity=0.059 Sum_probs=192.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCC-CceEEEEcCCCCchhHHHHHHcC
Q 043646 124 HEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDE-ERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
.++++++++++|++++ +|++| +|++++|..++.++ +++| ++ |+++.++|+.+...++..|
T Consensus 60 ~~l~~~~a~~~g~~~~-~I~~~-~Gs~e~i~~~~~~~---------------~~~g~~~--vli~~P~y~~y~~~~~~~G 120 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-QVLVS-RGADEGIELLIRAF---------------CEPGKDA--ILYCPPTYGMYSVSAETIG 120 (351)
T ss_pred HHHHHHHHHHhCCCHH-HEEEc-CCHHHHHHHHHHHh---------------cCCCCCE--EEEcCCCHHHHHHHHHHcC
Confidence 5688999999999887 89997 89999999999887 4676 54 8889899988887888899
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcCCCcccc
Q 043646 203 AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVKIN 280 (625)
Q Consensus 203 ~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~g~~~id 280 (625)
++++.+++++++.+|++++++++. ++++|++++|+||||.+.+.++|.++++.. ++++++|+|+.--.....
T Consensus 121 ~~~~~v~~~~~~~~d~~~l~~~~~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s 194 (351)
T PRK01688 121 VEIRTVPTLDNWQLDLPAIADNLD------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQAS 194 (351)
T ss_pred CEEEEeecCCCCCCCHHHHHHhcc------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCC
Confidence 999999998778899999988763 689999999999999999988877777542 689999999542211111
Q ss_pred CCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChh
Q 043646 281 LRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358 (625)
Q Consensus 281 ~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~ 358 (625)
+..+ ....--+++.|++|++|.|+ .+|++++++++. +.+..... ....+
T Consensus 195 ~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i--~~l~~~~~---------------------------~~~v~ 245 (351)
T PRK01688 195 LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVI--NLLLKVIA---------------------------PYPLS 245 (351)
T ss_pred hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHH--HHHHhccC---------------------------CCCCC
Confidence 1110 00122356679999997443 379999888773 22211110 00111
Q ss_pred HHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 359 IVQMIRAALAFWVKEYIG---YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 359 ~~~~~~aal~~~~~~~~g---~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
.... .++.+++ +..+ .+...+.....++++.+.|.++++++.+.+. .+++.+...+
T Consensus 246 ~~~~-~~a~~~L--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps----~~nfi~~~~~-------------- 304 (351)
T PRK01688 246 TPVA-DIAAQAL--SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDS----ETNYILARFT-------------- 304 (351)
T ss_pred HHHH-HHHHHHH--hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC----CCcEEEEEcC--------------
Confidence 1111 1222222 1112 2333445555678899999888777533342 2344333222
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAA 515 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~a 515 (625)
+..++.+.|.+ +||.++.+..+. + .++++|||++ +++|+++++++
T Consensus 305 ---~~~~l~~~L~~-~gi~vr~~~~~~--------~--------------------~~~~iRis~~---~~~e~~~l~~a 349 (351)
T PRK01688 305 ---ASSAVFKSLWD-QGIILRDQNKQP--------G--------------------LSNCLRITIG---TREECQRVIDA 349 (351)
T ss_pred ---CHHHHHHHHHH-CCeEEEECCCcC--------C--------------------CCCeEEEeCC---CHHHHHHHHHh
Confidence 24578888864 799999654321 1 1489999998 88999999998
Q ss_pred HH
Q 043646 516 LE 517 (625)
Q Consensus 516 L~ 517 (625)
|+
T Consensus 350 l~ 351 (351)
T PRK01688 350 LR 351 (351)
T ss_pred hC
Confidence 74
No 156
>PRK09148 aminotransferase; Validated
Probab=99.89 E-value=1.2e-20 Score=203.63 Aligned_cols=348 Identities=10% Similarity=0.069 Sum_probs=217.7
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal 153 (625)
..+.|+.+... ++|+.+.+++.+.+.. +....|....+..++.+.+.+++.+.+|.+ ++++|++| +|++.+|
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it-~G~~~al 105 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQD----PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVAT-LGSKEGF 105 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcC----cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEc-CChHHHH
Confidence 34556554433 3456777777665531 111112222223455555666665555643 43368888 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~ 233 (625)
..++.++ +++||. |+++.+.|+.+...++..|++++.++++.++. +++++++++.. ..++
T Consensus 106 ~~~~~~l---------------~~~gd~--Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~--~~~~ 165 (405)
T PRK09148 106 ANMAQAI---------------TAPGDV--ILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRH--SIPK 165 (405)
T ss_pred HHHHHHh---------------cCCCCE--EEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhh--cccc
Confidence 9998887 578885 99999999998888888999999999875432 34555555542 1257
Q ss_pred CeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCCCCCCC-
Q 043646 234 PMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKFLGGPG- 304 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~lggp~- 304 (625)
++++++++|+||||.+.+. ++|+++|++||+++++|++++.-. ....+.... ..+..+++.|++|.+|.|+
T Consensus 166 ~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 166 PIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 8999999999999999886 678899999999999999965321 111111110 0123356789999998665
Q ss_pred CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-hcCHHHHHHH
Q 043646 305 TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE-YIGYEVIKKQ 383 (625)
Q Consensus 305 g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~-~~g~~~i~~~ 383 (625)
.+|+++.++++. +.+... ......+.+.+.+. ++..++ .+ ..-.+..+++
T Consensus 246 R~G~~v~~~~~i--~~l~~~------------------------~~~~~~~~~~~~q~--~~~~~L-~~~~~~~~~~~~~ 296 (405)
T PRK09148 246 RMGFAVGNERLI--AALTRV------------------------KSYLDYGAFTPIQV--AATAAL-NGPQDCIAEMREL 296 (405)
T ss_pred heeeeeCCHHHH--HHHHHH------------------------HHHhccCCChHHHH--HHHHHH-hCcHHHHHHHHHH
Confidence 489999887762 222100 00011122222222 112222 11 1123455666
Q ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc
Q 043646 384 EDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG 463 (625)
Q Consensus 384 ~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~ 463 (625)
.+..++++.+.|.++ ++.+..+ .++.+.|.-.+... ..++..++++.|.++.||.+++|..|..
T Consensus 297 ~~~~r~~l~~~L~~~-~~~~~~p----~~g~f~~~~l~~~~-----------~~~~~~~~~~~ll~~~gV~v~pg~~f~~ 360 (405)
T PRK09148 297 YKKRRDVLVESFGRA-GWDIPPP----AASMFAWAPIPEAF-----------RHLGSLEFSKLLVEKADVAVAPGVGFGE 360 (405)
T ss_pred HHHHHHHHHHHHHHc-CCccCCC----CeeEEEEEECCCcc-----------CCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 677788888888775 5554433 34666665554310 0123457877776668999999876531
Q ss_pred hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 464 PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 464 ~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
. .++++||++. .+.++++..++.|.+++...
T Consensus 361 ~---------------------------~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 361 H---------------------------GDGYVRIALV--ENEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred C---------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 1 1489999997 46788888888888776543
No 157
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.89 E-value=5.3e-21 Score=208.31 Aligned_cols=294 Identities=17% Similarity=0.094 Sum_probs=199.5
Q ss_pred HHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc
Q 043646 124 HEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS 201 (625)
Q Consensus 124 ~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~ 201 (625)
.++++.++++++. .++++|++| +|++++|..++.++ ++|||. |++..+.|+.+...++..
T Consensus 124 ~~lr~~ia~~~~~~~~~~~~Iiit-~G~~~al~~~~~~l---------------~~pgd~--Vlv~~P~y~~~~~~~~~~ 185 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAFEIDLT-SGAIDAIERLLCAH---------------LLPGDS--VAVEDPCFLSSINMLRYA 185 (431)
T ss_pred HHHHHHHHHHHhhccCCcCeEEEe-cCcHHHHHHHHHHh---------------CCCCCE--EEEeCCCcHHHHHHHHHc
Confidence 3466666666652 233378888 89999999999887 578986 999999999999889999
Q ss_pred CCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEe-cccCccccccCHH---HHHHHHHHc-CCEEEEeccCcCCC
Q 043646 202 LAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS-ACSNVTGIYSDTR---SIARLLHQY-GGFACFDFAASGPY 276 (625)
Q Consensus 202 G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~-~~~n~TG~~~~l~---~I~~la~~~-g~~vivD~A~~~g~ 276 (625)
|++++.+++++++ +|+++|+++++ +++++++++ +++||||.+.+.+ +|.++|+++ ++++++|++++--.
T Consensus 186 g~~~~~v~~~~~g-~~~~~l~~~~~-----~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~ 259 (431)
T PRK15481 186 GFSASPVSVDAEG-MQPEKLERALA-----QGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLS 259 (431)
T ss_pred CCeEEeeccCCCC-CCHHHHHHHHh-----cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhc
Confidence 9999999997665 89999999987 468888886 9999999999976 899999999 99999999865211
Q ss_pred c-c-ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 277 V-K-INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 277 ~-~-id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
. + ...-.. ...--+++.|++|.|+ |+ .+|+++.++++. ..+.... ....
T Consensus 260 ~~~~~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~--~~~~~~~------------------------~~~~ 311 (431)
T PRK15481 260 SSPYHSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDSATS--ARLRLRL------------------------NSGT 311 (431)
T ss_pred cCCCCCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCHHHH--HHHHHHH------------------------hccc
Confidence 0 0 111111 0122467789999999 64 489999887762 1111000 0000
Q ss_pred CCChhHHHHHHHHHHHHHHhhc---CHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccc
Q 043646 354 GGTPQIVQMIRAALAFWVKEYI---GYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENM 430 (625)
Q Consensus 354 ~gt~~~~~~~~aal~~~~~~~~---g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~ 430 (625)
.+.+.+.+. ++..++ .+.. -.+..++..+..++++.+.|.+. ++++..| .++.+.|.-.+.
T Consensus 312 ~~~s~~~q~--a~~~~l-~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p----~gg~f~~~~l~~-------- 375 (431)
T PRK15481 312 QWVSHLLQD--LVYACL-TDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSP----GDGLNLWLPLDT-------- 375 (431)
T ss_pred cCCCHHHHH--HHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccC----CCeEEEEEECCC--------
Confidence 112222221 222222 2211 13345666667777888888775 5655444 346666655442
Q ss_pred cccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 431 KIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 431 ~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
+..++++.|. ++||.+++|..|..+ . ..+++||+++. .++++++
T Consensus 376 --------~~~~~~~~l~-~~gV~v~pg~~f~~~--~------------------------~~~~iRis~~~-~~~~~i~ 419 (431)
T PRK15481 376 --------DSQATALTLA-KSGWLVREGEAFGVS--A------------------------PSHGLRITLST-LNDAEIN 419 (431)
T ss_pred --------CHHHHHHHHH-HCCcEEecCCccccC--C------------------------CCCeEEEEcCC-CChHHHH
Confidence 1457888885 489999999876411 0 13689999975 4689999
Q ss_pred HHHHHHHHHHH
Q 043646 511 FILAALEFIAA 521 (625)
Q Consensus 511 ~ll~aL~~~~~ 521 (625)
.+++.|.+++.
T Consensus 420 ~~~~~l~~~~~ 430 (431)
T PRK15481 420 RLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHhc
Confidence 99999998753
No 158
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.89 E-value=4e-20 Score=199.59 Aligned_cols=338 Identities=11% Similarity=0.042 Sum_probs=215.2
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
.|..+.+++.+.+... ....|....+...+.+.+.+++.+..|.. ++++|++| +|+.++|..++.++
T Consensus 47 ~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it-~G~~~al~~~~~~l------ 115 (403)
T PRK08636 47 TPQHIIDKLCESAQKP----KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVAT-MGSKEGYVHLVQAI------ 115 (403)
T ss_pred CCHHHHHHHHHHhcCC----ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEC-CChHHHHHHHHHHh------
Confidence 4566677766655321 11112222234456666777777666753 33269998 89999999999887
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHHHh--hhCCCCeEEEEecc
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLD--DNGLLDIEALRSQLELY--KAAKRPMLGSFSAC 242 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~~~ld~~~L~~~l~~~--~~~~~~~lv~~~~~ 242 (625)
+++||. |+++.+.|+.+...++..|++++.|+++ .+..+|++.+.+.+++. ....+++++++++|
T Consensus 116 ---------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P 184 (403)
T PRK08636 116 ---------TNPGDV--AIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFP 184 (403)
T ss_pred ---------CCCCCE--EEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCC
Confidence 578885 9999999999988888899999999985 34578887654433321 11247899999999
Q ss_pred cCccccccCH---HHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCC-CCCcEEEEcCCCCCCCCC-CceEEEEec
Q 043646 243 SNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VKINLRSRNI-DGYDAIFLATHKFLGGPG-TPGILLISK 313 (625)
Q Consensus 243 ~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~-~~~D~v~~S~hK~lggp~-g~G~l~v~~ 313 (625)
+||||.+.+. ++|+++|++|++++++|++++.-. ....+..+.. ....+++.|++|.||.|+ .+|+++.++
T Consensus 185 ~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~ 264 (403)
T PRK08636 185 HNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK 264 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH
Confidence 9999999885 678889999999999999965221 1111222210 112244679999997665 489999887
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKE-YIGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~-~~g~~~i~~~~~~l~~~l~ 392 (625)
++.. .+... ......+++.+.+.+.. ..+.. ....+.+++.....++.+.
T Consensus 265 ~li~--~~~~~------------------------~~~~~~~~~~~~q~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (403)
T PRK08636 265 KLVG--ALKKI------------------------KSWLDYGMFTPIQVAAT---IALDGDQSCVEEIRETYRKRRDVLI 315 (403)
T ss_pred HHHH--HHHHH------------------------HHHhcccCChHHHHHHH---HHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 7621 11100 00011233333333221 11111 1123445556666677788
Q ss_pred HhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 393 GRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
+.|... ++.+..+ .++.+.|.-.++.. ..++..+++..+.+++||.+.+|..|+..
T Consensus 316 ~~L~~~-~~~~~~p----~~g~~~~~~l~~~~-----------~~~~~~~l~~~ll~~~gV~v~pg~~f~~~-------- 371 (403)
T PRK08636 316 ESFANA-GWELQKP----RASMFVWAKIPEPA-----------RHLGSLEFSKQLLTEAKVAVSPGIGFGEY-------- 371 (403)
T ss_pred HHHHHC-CCcccCC----CcceEEEEECCCcc-----------CCCCHHHHHHHHHHhCCEEEecchhhCcC--------
Confidence 888775 5655444 34566665554210 01235677777666689999998766411
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++||+++ .++++++..++.|++++..
T Consensus 372 -------------------~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 372 -------------------GDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred -------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 2489999997 5789999999999887754
No 159
>PRK03321 putative aminotransferase; Provisional
Probab=99.89 E-value=3.3e-21 Score=204.34 Aligned_cols=320 Identities=15% Similarity=0.046 Sum_probs=208.3
Q ss_pred ceEeccCCCCCc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTASGR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+.... +++.+.+++.+.+......|. .-..++|+.++++++++++ +|+++ +|+++++..
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-----------~g~~~lr~~ia~~~~~~~~-~I~~~-~G~~~~l~~ 89 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPD-----------MGAVELRAALAEHLGVPPE-HVAVG-CGSVALCQQ 89 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CcHHHHHHHHHHHhCcCHH-HEEEC-CCHHHHHHH
Confidence 457777665443 566888888776532211221 1256789999999998766 79987 899998888
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
++..+ +++||+ |+++.+.+..+...++..|++++.++.++++.+|+++++++++ ++++
T Consensus 90 ~~~~~---------------~~~gd~--Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-----~~~~ 147 (352)
T PRK03321 90 LVQAT---------------AGPGDE--VIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-----DRTR 147 (352)
T ss_pred HHHHh---------------cCCCCE--EEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-----cCCC
Confidence 87766 578885 8888777777666677789999999998667899999999887 5789
Q ss_pred EEEEecccCccccccCHHHHHHHHHH--cCCEEEEeccCcCCCc----cccCCCCCCCCCcEEEEcCCCCCCCCC-CceE
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYV----KINLRSRNIDGYDAIFLATHKFLGGPG-TPGI 308 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~--~g~~vivD~A~~~g~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~ 308 (625)
+|++++++||||.+.|.++|.++|+. +|+++++|+++..... +..+.......--+++.|++|.||.|+ .+|+
T Consensus 148 ~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~ 227 (352)
T PRK03321 148 LIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGY 227 (352)
T ss_pred EEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhh
Confidence 99999999999999999999999997 5999999999652111 011111100111255668999998554 4899
Q ss_pred EEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 309 LLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 309 l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
+++++++. +.+.... ...+.+..... ++.+.+.......+.+ ++....+
T Consensus 228 ~v~~~~~~--~~~~~~~---------------------------~~~~~s~~~q~-~a~~~l~~~~~~~~~~-~~~~~~r 276 (352)
T PRK03321 228 AVGHPEVI--AALRKVA---------------------------VPFSVNSLAQA-AAIASLAAEDELLERV-DAVVAER 276 (352)
T ss_pred hcCCHHHH--HHHHHhc---------------------------CCCCCCHHHHH-HHHHHhcCHHHHHHHH-HHHHHHH
Confidence 99987762 2221110 01122222211 1122221011112222 2233345
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
+++.+.|.+. ++.+..+ . +.+.+...+. +..++.+.|. ++||.+++ |+
T Consensus 277 ~~~~~~L~~~-~~~~~~~----~-g~~i~i~l~~----------------~~~~~~~~l~-~~gI~v~~---~~------ 324 (352)
T PRK03321 277 DRVRAALRAA-GWTVPPS----Q-ANFVWLPLGE----------------RTADFAAAAA-EAGVVVRP---FA------ 324 (352)
T ss_pred HHHHHHHHHC-CCccCCC----C-CCEEEEeCCC----------------CHHHHHHHHH-HCCEEEEc---cC------
Confidence 5677777765 5544222 2 3333332221 2457888884 58999974 21
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
+.++||+++ +.+++++++++|+++++
T Consensus 325 ------------------------~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 325 ------------------------GEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred ------------------------CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 245999986 89999999999998754
No 160
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.89 E-value=1.6e-20 Score=202.27 Aligned_cols=340 Identities=15% Similarity=0.068 Sum_probs=213.6
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC---CCCcEEEeCChHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG---QADAIIFCGAGTTAA 152 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~---~~~~vift~sGttaa 152 (625)
..+.|..+... ++++.+.+++.+.+..... |....+..++.+.+.+++.+.+|.+ ++++|++| +|++.+
T Consensus 30 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it-~G~~~a 102 (396)
T PRK09147 30 PPISLSIGEPKHPTPAFIKDALAANLDGLAS------YPTTAGLPALREAIAAWLERRYGLPALDPATQVLPV-NGSREA 102 (396)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHhhhhcC------CCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEEC-CChHHH
Confidence 45556554433 3467788887765532111 2112223456666666666666743 33378887 899999
Q ss_pred HHHHHHHhcccccchhhhhhhhccCC---CCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHH
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRD---EERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLEL 227 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~---gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~ 227 (625)
|..++.++ +++ || .|+++.+.|+.+...++..|++++.||++++ +.+|++++++.+.
T Consensus 103 l~~~~~~l---------------~~~~~~gd--~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~- 164 (396)
T PRK09147 103 LFAFAQTV---------------IDRDGPGP--LVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW- 164 (396)
T ss_pred HHHHHHHH---------------cCCCCCCC--EEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-
Confidence 99998887 467 55 4999999998888888889999999999753 4799999988876
Q ss_pred hhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc-----ccc-CC---CCCCC--CCcEEE
Q 043646 228 YKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-----KIN-LR---SRNID--GYDAIF 293 (625)
Q Consensus 228 ~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~-----~id-~~---~~~~~--~~D~v~ 293 (625)
++++++++++|+||||.+.+ +++|+++|++|++++++|++++.-.. +.. +. ..+.+ .--+++
T Consensus 165 ----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 240 (396)
T PRK09147 165 ----ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVF 240 (396)
T ss_pred ----hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEE
Confidence 47999999999999999986 56788888999999999999663211 110 10 11001 112777
Q ss_pred EcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHH
Q 043646 294 LATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVK 372 (625)
Q Consensus 294 ~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~ 372 (625)
.|++|.++.|+ .+|+++.++++. +.+.... .....+.+.+.+. +++..+.
T Consensus 241 ~S~SK~~~~~GlRiG~~~~~~~l~--~~~~~~~------------------------~~~~~~~~~~~q~--a~~~~~~- 291 (396)
T PRK09147 241 HSLSKRSNVPGLRSGFVAGDAALL--KKFLLYR------------------------TYHGCAMPPAVQA--ASIAAWN- 291 (396)
T ss_pred eccccccCCccceeeeecCCHHHH--HHHHHHh------------------------hhcccCCCHHHHH--HHHHHhc-
Confidence 89999887665 489999887762 2111000 0000111122221 1122221
Q ss_pred hhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcC
Q 043646 373 EYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFG 452 (625)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~g 452 (625)
...-....++..++.++.+.+.|.+. +.+..+ .++.+.|.-.+ ++..++++.|.+++|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p----~~g~f~~~~~~----------------~~~~~~~~~ll~~~g 349 (396)
T PRK09147 292 DEAHVRENRALYREKFDAVTPILAPV--LDVQLP----DAGFYLWAKVP----------------GDDTEFARRLYADYN 349 (396)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCC----CeeEEEEEECC----------------CCHHHHHHHHHHhCC
Confidence 11123344555566666677777653 333222 34555555443 124567777766689
Q ss_pred eeeecCCCCCch-hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 453 IQARGGCACAGP-YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 453 I~v~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
|.+.+|..|+.. .+.. ...+++||+++. ++++++..++.|++++
T Consensus 350 v~v~pg~~f~~~~~~~~----------------------~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 350 VTVLPGSYLAREAHGVN----------------------PGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred EEEeCCccccccccCCC----------------------CCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 999999876421 0000 024899999974 5788999998888765
No 161
>PLN02656 tyrosine transaminase
Probab=99.89 E-value=1.6e-20 Score=203.10 Aligned_cols=344 Identities=12% Similarity=0.034 Sum_probs=215.8
Q ss_pred CceEeccCCCC-----CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCCh
Q 043646 76 RRLTYADHTAS-----GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAG 148 (625)
Q Consensus 76 ~~~~Yld~~~~-----~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sG 148 (625)
++++-|..+.. .++|+.+.+++.+.+... ....|....+..++.+.+.+++.+..| .+++ +|++| +|
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G 104 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSN----KFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLD-DVFIT-SG 104 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcc-cEEEe-CC
Confidence 45667766555 366789999888776431 111121112233444444444444434 3444 89998 78
Q ss_pred HHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHH
Q 043646 149 TTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLE 226 (625)
Q Consensus 149 ttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~ 226 (625)
+++++..++.++ +++||+ |+++.+.|+.+....+..|++++.+++++ ++.+|+++|+++++
T Consensus 105 ~~~al~~~~~~l---------------~~~gd~--Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~ 167 (409)
T PLN02656 105 CTQAIDVALSML---------------ARPGAN--ILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD 167 (409)
T ss_pred hHHHHHHHHHHH---------------hCCCCe--EEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc
Confidence 999999988877 478886 99999999888777777899999999864 35799999999887
Q ss_pred HhhhCCCCeEEEEecccCcccccc---CHHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEcCCCC
Q 043646 227 LYKAAKRPMLGSFSACSNVTGIYS---DTRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLATHKF 299 (625)
Q Consensus 227 ~~~~~~~~~lv~~~~~~n~TG~~~---~l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S~hK~ 299 (625)
++++++++++|+||||.+. ++++|+++|+++|+++++|++++.-. ....+........-+++.|++|.
T Consensus 168 -----~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 242 (409)
T PLN02656 168 -----QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKR 242 (409)
T ss_pred -----cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchh
Confidence 5789999999999999996 47888999999999999999965211 11111111111223566799999
Q ss_pred CCCCC-CceEEEEec--------cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHH
Q 043646 300 LGGPG-TPGILLISK--------ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFW 370 (625)
Q Consensus 300 lggp~-g~G~l~v~~--------~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~ 370 (625)
|+.|+ .+|+++.++ ++. ..+. . ......+.+.+.+ .++..+
T Consensus 243 f~~pGlRiG~~i~~~~~~~~~~~~~~--~~~~------------------------~-~~~~~~~~s~~~q---~a~~~~ 292 (409)
T PLN02656 243 WIVPGWRLGWFVTTDPSGSFRDPKIV--ERIK------------------------K-YFDILGGPATFIQ---AAVPTI 292 (409)
T ss_pred ccCcceeEEEEEEeCcccccccHHHH--HHHH------------------------H-HHhhhcCCCHHHH---HHHHHH
Confidence 87775 499999853 221 1110 0 0000112222222 222222
Q ss_pred HHh--hcCHHHHHHHHHHHHHHHHHhhCCCCcEEEe-CCCCCCCcceEEEEeccCCCCCCccccccCCCCC-ChHHHHHH
Q 043646 371 VKE--YIGYEVIKKQEDVYIESALGRILPNQNIQVL-GNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL-HGPFVATL 446 (625)
Q Consensus 371 ~~~--~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~-~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l-~~~~v~~~ 446 (625)
+.+ ....+..+++.+..++.+.+.|..++++... .| .++.+.|...+... -..+ +..+++..
T Consensus 293 l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p----~gg~~~w~~l~~~~----------~~~~~~~~~~~~~ 358 (409)
T PLN02656 293 LEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKP----EGSMAVMVKLNLSL----------LEDISDDIDFCFK 358 (409)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCC----CeEEEEEEecchhh----------cCCCCCHHHHHHH
Confidence 211 1124455666667778888888877554322 22 34555555443100 0001 23344433
Q ss_pred hhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 447 FNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 447 L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+..+.||.+.+|..|+ .++++||+++. ++++++..++.|++++..
T Consensus 359 ~l~~~gV~v~pg~~fg-----------------------------~~~~iRi~~~~--~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 359 LAREESVIILPGTAVG-----------------------------LKNWLRITFAA--DPSSLEEALGRIKSFYLR 403 (409)
T ss_pred HHHhCCEEEecchhcC-----------------------------CCCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 4356899999987664 14899999984 789999999999887654
No 162
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.89 E-value=2.2e-21 Score=197.17 Aligned_cols=315 Identities=16% Similarity=0.069 Sum_probs=216.5
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
.++|+.|.+++.+.+.. +....|..+++..++...+++.+++++|.. ++++|++| .|+.++|...+.++
T Consensus 43 ~~~P~fv~ea~~~~~~~----~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT-~GA~~ai~~~~~~l---- 113 (420)
T KOG0257|consen 43 FPPPKFVTEAAKNAAKE----PSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVT-AGANEAISSALLGL---- 113 (420)
T ss_pred CCCcHHHHHHHHHHhcc----chhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEe-cCchHHHHHHHHHH----
Confidence 57889999999887743 222235566778889999999999988874 44589998 89999888666666
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecC--------CCCCCCHHHHHHHHHHhhhCCCCeE
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLD--------DNGLLDIEALRSQLELYKAAKRPML 236 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--------~~~~ld~~~L~~~l~~~~~~~~~~l 236 (625)
+++||+ |++-.+.+.++....+..|..++.|++. .++.+|.+.|+.+++ ++||+
T Consensus 114 -----------~~~GDe--Vii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-----~kTk~ 175 (420)
T KOG0257|consen 114 -----------LNPGDE--VIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-----EKTKA 175 (420)
T ss_pred -----------cCCCCE--EEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-----CCccE
Confidence 689997 8888999999998999999999999987 257899999999999 79999
Q ss_pred EEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcC----CCccccCCCC-CCCCCcEEEEcCCCCCCCCCC--c
Q 043646 237 GSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG----PYVKINLRSR-NIDGYDAIFLATHKFLGGPGT--P 306 (625)
Q Consensus 237 v~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~----g~~~id~~~~-~~~~~D~v~~S~hK~lggp~g--~ 306 (625)
|++++|+||||.+.+ |++|+++|++||+++|.|+++.. |...+.+..+ ++...-+-+.|+.|+|+ ..| +
T Consensus 176 Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~-~TGWrl 254 (420)
T KOG0257|consen 176 IILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG-VTGWRL 254 (420)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceee-eeeeee
Confidence 999999999999976 78899999999999999999442 2211211111 11223455679999997 444 8
Q ss_pred eEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHH--HhhcC---HHHH
Q 043646 307 GILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWV--KEYIG---YEVI 380 (625)
Q Consensus 307 G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~--~~~~g---~~~i 380 (625)
|+++.++.++ ....+ +..++....+..++.+ .++++... .+..| ...+
T Consensus 255 GW~igp~~L~--~~~~~------------------------vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~ 308 (420)
T KOG0257|consen 255 GWAIGPKHLY--SALFP------------------------VHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITEL 308 (420)
T ss_pred eeeechHHhh--hhHHH------------------------HhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHH
Confidence 9999966662 22211 1223333333333322 22222211 11222 2235
Q ss_pred HHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCC--CCChHHHHHHhhhhcCeeeecC
Q 043646 381 KKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNK--PLHGPFVATLFNDLFGIQARGG 458 (625)
Q Consensus 381 ~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~--~l~~~~v~~~L~~~~gI~v~~G 458 (625)
.+..++.++.+.+.|.++ |+++.+|+ ++.+.+.-++... + -....+. .-+...++..|.++.|+.+-++
T Consensus 309 ~~~y~~krdil~k~L~~l-g~~v~~p~----gayyl~adfs~~~-~---~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~ 379 (420)
T KOG0257|consen 309 VKEYKEKRDILAKALEEL-GLKVTGPE----GAYYLWADFSLAK-S---WPFFEEILEKPDDFKFVRWLIKEGGVVVIPP 379 (420)
T ss_pred HHHHHHHHHHHHHHHHhc-CCccccCC----CceEEEEeccccc-c---CCcchhhccCCCceeeehhhhccCcEEEeCc
Confidence 666777799999999998 99999885 3555555544100 0 0000000 0122356788888999999999
Q ss_pred CCCCch
Q 043646 459 CACAGP 464 (625)
Q Consensus 459 ~~~~~~ 464 (625)
+.+...
T Consensus 380 saF~s~ 385 (420)
T KOG0257|consen 380 SAFGSR 385 (420)
T ss_pred hhcCCc
Confidence 988743
No 163
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=2.9e-21 Score=206.65 Aligned_cols=303 Identities=16% Similarity=0.139 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH-
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ- 200 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~- 200 (625)
..+++++.+++++|.+ + .+++ ++|+. ++..++.++ +++||+ |+++...|......+..
T Consensus 62 t~~~Le~~lA~l~G~~-~-al~~-~sG~~-Ai~~~l~al---------------~~~Gd~--Vv~~~~~y~~~~~~~~~~ 120 (386)
T PRK06767 62 TVKLFEERMAVLEGGE-E-ALAF-GSGMA-AISATLIGF---------------LKAGDH--IICSNGLYGCTYGFLEVL 120 (386)
T ss_pred chHHHHHHHHHHhCCC-c-EEEE-CCHHH-HHHHHHHHH---------------hCCCCE--EEEcCCcHHHHHHHHHHH
Confidence 3577999999999974 2 4555 47775 566666555 478885 88888888877655433
Q ss_pred ---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc
Q 043646 201 ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (625)
Q Consensus 201 ---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~ 277 (625)
.|+++..++. .|+++++++++ +++++|++++++||||.+.|+++|.++||++|+++++|++++.++.
T Consensus 121 ~~~~gi~~~~~~~-----~d~~~l~~~i~-----~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~ 190 (386)
T PRK06767 121 EEKFMITHSFCDM-----ETEADIENKIR-----PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL 190 (386)
T ss_pred HhhcCeEEEEeCC-----CCHHHHHHhhC-----cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 3666666654 37899999887 5799999999999999999999999999999999999999987665
Q ss_pred cccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC
Q 043646 278 KINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
..++. . ++|+++.|++|+++|++. .|+++.+++.. ..+... .+...|
T Consensus 191 ~~pl~-~---g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i--~~~~~~-------------------------~~~~~g 239 (386)
T PRK06767 191 QRPLE-L---GCDAVVHSATKYIGGHGDVVAGVTICKTRAL--AEKIRP-------------------------MRKDIG 239 (386)
T ss_pred CCchh-c---CCcEEEecCcceecCCCCceeEEEEeChHHH--HHHHHH-------------------------HHHHhC
Confidence 44432 2 789999999999998875 48888887762 111000 000111
Q ss_pred -C-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEE-eCCCC-------CCCcceEEEEeccCCCC
Q 043646 356 -T-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQV-LGNTS-------VKRQAILSFLVYSTTNS 425 (625)
Q Consensus 356 -t-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v-~~~~~-------~~~~~i~~f~~~~~~~~ 425 (625)
. .++.+ ++... .......+.++.++++.++.++|+++|+++. ..|.. ...+++++|.+....
T Consensus 240 ~~~~~~~a----~l~~~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~-- 311 (386)
T PRK06767 240 GIMAPFDA----WLLLR--GLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK-- 311 (386)
T ss_pred CCCCHHHH----HHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH--
Confidence 1 11111 11111 1112344556677789999999999999874 43321 124678999874210
Q ss_pred CCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCC
Q 043646 426 SPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPY 502 (625)
Q Consensus 426 ~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~ 502 (625)
.....+.+.| +.+++.++-|...+. |.......+..+... ..|+.++.||||+|.
T Consensus 312 ------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~l~R~svGl 369 (386)
T PRK06767 312 ------------EETQAFINDL-HFITIAVSLGDTETLIQHPATMTHAAIPAELRQ---------EMGIYDNLIRLSVGL 369 (386)
T ss_pred ------------HHHHHHHHhC-CccEEecCCCCcCccccCCCccccccCCHHHHH---------hcCCCCCeEEEEecc
Confidence 1245678888 567888876654331 211111122221111 256778999999996
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 043646 503 YMSNEEFEFILAALEFIA 520 (625)
Q Consensus 503 ~~t~edid~ll~aL~~~~ 520 (625)
||.+.+++-|++.+
T Consensus 370 ----E~~~dl~~dl~~al 383 (386)
T PRK06767 370 ----ESWEDIVSDLEQAL 383 (386)
T ss_pred ----CCHHHHHHHHHHHH
Confidence 45556666555544
No 164
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.88 E-value=5.5e-20 Score=197.95 Aligned_cols=340 Identities=12% Similarity=0.065 Sum_probs=211.4
Q ss_pred ceEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sGttaal 153 (625)
..+.|..+.. .++|+.+.+++.+.+.....+.+ .|....+...+.+.+.+++.+.++ ++++ +|++| +|++.+|
T Consensus 34 ~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t-~G~~~al 109 (394)
T PRK06836 34 NVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLH--GYMPNAGYPEVREAIAESLNRRFGTPLTAD-HIVMT-CGAAGAL 109 (394)
T ss_pred CeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcc--cCCCCCCCHHHHHHHHHHHHHHhCCCCCcC-cEEEe-CChHHHH
Confidence 3444443332 24567888888776643211111 121111223333333444433333 3454 89998 7899999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC-CCCCHHHHHHHHHHhhhCC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN-GLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~ 232 (625)
..++..+ +++||+ |+++.+.|..+...++..|++++.++++++ +.+|+++|+++++ +
T Consensus 110 ~~~~~~l---------------~~~gd~--Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-----~ 167 (394)
T PRK06836 110 NVALKAI---------------LNPGDE--VIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-----P 167 (394)
T ss_pred HHHHHHh---------------cCCCCE--EEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-----c
Confidence 9988876 478885 888988998887777888999999999875 6899999999997 5
Q ss_pred CCeEEEEecccCccccccC---HHHHHHHHHH------cCCEEEEeccCcCCCcc-ccCCC-CCCCCCcEEEEcCCCCCC
Q 043646 233 RPMLGSFSACSNVTGIYSD---TRSIARLLHQ------YGGFACFDFAASGPYVK-INLRS-RNIDGYDAIFLATHKFLG 301 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~---l~~I~~la~~------~g~~vivD~A~~~g~~~-id~~~-~~~~~~D~v~~S~hK~lg 301 (625)
++++|++++++||||.+.| +++|+++|++ ||+++++|+++..-... -.... .....-.+++.|++|.||
T Consensus 168 ~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 247 (394)
T PRK06836 168 KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLS 247 (394)
T ss_pred CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhcc
Confidence 7999999999999999988 5667778888 89999999996521110 00000 000123577789999998
Q ss_pred CCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc--CCChhHHHHHHHHHHHHHHhhcCHH
Q 043646 302 GPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN--GGTPQIVQMIRAALAFWVKEYIGYE 378 (625)
Q Consensus 302 gp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~~aal~~~~~~~~g~~ 378 (625)
.|+ .+|++++++.......+...... ..+.. ..++++. +.++..++.+. .
T Consensus 248 ~pGlRiG~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~---q~~~~~~l~~~--~- 300 (394)
T PRK06836 248 LPGERIGYIAVNPEMEDADDLVAALVF---------------------ANRILGFVNAPALM---QRVVAKCLDAT--V- 300 (394)
T ss_pred CcceeeEEEecCHHHhhhHHHHHHHHH---------------------HhhccccccCCHHH---HHHHHHHhCCh--H-
Confidence 665 58999987665210000000000 00000 1122222 22222222221 1
Q ss_pred HHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecC
Q 043646 379 VIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGG 458 (625)
Q Consensus 379 ~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G 458 (625)
...+.++.++.+.+.|.++ ++++..+. ++.+.|...+. .+..++++.| .++||.+++|
T Consensus 301 -~~~~~~~~r~~l~~~L~~~-g~~~~~~~----gg~~~~~~~~~---------------~~~~~~~~~l-~~~gv~v~~g 358 (394)
T PRK06836 301 -DVSIYKRNRDLLYDGLTEL-GFECVKPQ----GAFYLFPKSPE---------------EDDVAFCEKA-KKHNLLLVPG 358 (394)
T ss_pred -HHHHHHHHHHHHHHHHHhC-CCEeecCC----ceEEEEEeCCC---------------CCHHHHHHHH-HhCCEEEECc
Confidence 1233444567777888776 67765542 35555544332 1355777777 4589999988
Q ss_pred CCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 459 CACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..|. .++++||+++ .++++++..++.|+++++.
T Consensus 359 ~~f~-----------------------------~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 359 SGFG-----------------------------CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred hhcC-----------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 7653 1389999997 4789999999999988753
No 165
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=6.4e-21 Score=204.52 Aligned_cols=340 Identities=13% Similarity=0.070 Sum_probs=208.3
Q ss_pred ceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 043646 77 RLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRL 156 (625)
Q Consensus 77 ~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l 156 (625)
..+|++++...+.+..+.+.... ... .+.+++.......++++.+++++|++.. +++ ++|+.+. ..+
T Consensus 30 ~pi~~~~~~~~~~~~~~~~~~~~-------~~~--~~~y~r~~~p~~~~Le~~lA~l~G~~~~--~~~-~sG~~Ai-~~~ 96 (398)
T PRK07504 30 EALFLTQGFVYDTAEAAEARFKG-------EDP--GFIYSRYSNPTVDMFEKRMCALEGAEDA--RAT-ASGMAAV-TAA 96 (398)
T ss_pred CCeECCCCccCCCHHHHHHHhcc-------CcC--CceeecCCCchHHHHHHHHHHHhCCCee--eEe-cCHHHHH-HHH
Confidence 46999999988877665543211 111 1222222233467899999999998754 444 4777654 443
Q ss_pred HHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH----HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCC
Q 043646 157 QEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAK 232 (625)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~----~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~ 232 (625)
+.++ +++||+ |+++...|.+....+. ..|++++.++ .+|+++++++++ +
T Consensus 97 l~~~---------------l~~Gd~--Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-----~ 149 (398)
T PRK07504 97 ILCQ---------------VKAGDH--VVAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-----P 149 (398)
T ss_pred HHHH---------------hCCCCE--EEEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-----c
Confidence 3333 578886 8888888887655443 4588888885 268999999987 6
Q ss_pred CCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC-Cc-eEEE
Q 043646 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG-TP-GILL 310 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~-G~l~ 310 (625)
+|++|++++++||||.+.|+++|.++|+++|+++++|++++.+.....+ .+ ++|+++.|+||++++++ .+ |+++
T Consensus 150 ~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~-~~---gaDivv~S~sK~l~g~g~~~GG~vv 225 (398)
T PRK07504 150 NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPL-EL---GAHIVVYSATKHIDGQGRCLGGVVL 225 (398)
T ss_pred CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCch-hh---CCCEEEeeccccccCCccceEEEEE
Confidence 8999999999999999999999999999999999999998876543222 22 78999999999998775 24 4565
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC-ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG-TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIE 389 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g-t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (625)
.+++... +.+. ......| .++... +++... .........++..+++.
T Consensus 226 ~~~~~i~-~~~~--------------------------~~~~~~g~~~s~~~---A~~~l~--~L~tl~~R~~~~~~na~ 273 (398)
T PRK07504 226 SDKAWIE-EHLQ--------------------------DYFRHTGPSLSPFN---AWTLLK--GLETLPVRVRQQTESAA 273 (398)
T ss_pred eCcHHHH-HHHH--------------------------HHHHHhCCCCCHHH---HHHHHh--ccchHHHHHHHHHHHHH
Confidence 5555411 0000 0000112 111111 111111 12223444555667889
Q ss_pred HHHHhhCCCCcEE-EeCCCC--C-----------CCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeee
Q 043646 390 SALGRILPNQNIQ-VLGNTS--V-----------KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQA 455 (625)
Q Consensus 390 ~l~~~L~~l~gv~-v~~~~~--~-----------~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v 455 (625)
.+.+.|.+.|++. |+.|.- . ..+++++|.+..+. -....+++.| +.+.+.+
T Consensus 274 ~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~--------------~~~~~~~~~l-~~~~~~~ 338 (398)
T PRK07504 274 AIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGK--------------EAAFRFLNAL-KIVRISN 338 (398)
T ss_pred HHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCH--------------HHHHHHHHhC-Ccceecc
Confidence 9999999888774 544421 1 12678888884211 0123455655 4455555
Q ss_pred ecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 456 RGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 456 ~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.-|...+. |.......+..+... ..|+.++.||||+|.- |.+.+++-|+..+
T Consensus 339 slG~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~liR~svGlE----~~~dl~~dl~~al 393 (398)
T PRK07504 339 NLGDAKSLITHPATTTHKNLSPEARA---------ELGISEGFLRLSAGLE----DTDDLIEDLAAAL 393 (398)
T ss_pred cCCCCCeeeeCCCCCCcccCCHHHHH---------hcCCCCCeEEEEeccC----CHHHHHHHHHHHH
Confidence 54443321 111111222221111 2567789999999974 4445555444444
No 166
>PRK08175 aminotransferase; Validated
Probab=99.88 E-value=1.1e-19 Score=195.65 Aligned_cols=336 Identities=11% Similarity=0.047 Sum_probs=213.9
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
.|+.+.+++.+.+... ....|....+..++.+.+.+++.+.+|.. +++++++| +|+++++..++..+
T Consensus 43 ~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t-~G~~~~l~~~~~~~------ 111 (395)
T PRK08175 43 TPPHIVEKLCEVAQRP----DTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVT-IGSKEGLAHLMLAT------ 111 (395)
T ss_pred CCHHHHHHHHHHHhCC----CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEc-cCcHHHHHHHHHHh------
Confidence 4556777776655321 11112222234556666666666665653 33368888 89999999888776
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT 246 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T 246 (625)
++|||+ |+++.+.|+.....++..|++++.++++.++. +.++|++++++ ..++++++++++|+|||
T Consensus 112 ---------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~--~~~~~~~v~i~~p~NPt 177 (395)
T PRK08175 112 ---------LDHGDT--VLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD-FFNELERAIRE--SYPKPKMMILGFPSNPT 177 (395)
T ss_pred ---------CCCCCE--EEEcCCCCcchHHHHHHcCCeEEEEecccCCC-cHHHHHHHHhh--ccCCceEEEEeCCCCCC
Confidence 578886 99999999998888888999999999876432 57888888863 12478999999999999
Q ss_pred ccccCH---HHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCC-CCCCcEEEEcCCCCCCCCC-CceEEEEeccccc
Q 043646 247 GIYSDT---RSIARLLHQYGGFACFDFAASGPY----VKINLRSRN-IDGYDAIFLATHKFLGGPG-TPGILLISKALYQ 317 (625)
Q Consensus 247 G~~~~l---~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~ 317 (625)
|.+.+. ++|+++|++||+++|+|++++.-. ....+..+. ..+..+++.|++|.||.|+ .+|+++.++++.+
T Consensus 178 G~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~ 257 (395)
T PRK08175 178 AQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVS 257 (395)
T ss_pred CCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHH
Confidence 999887 689999999999999999965311 111111110 0123356789999998675 3899998877622
Q ss_pred cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 318 LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
.+... ......++....+.+ +..++.......+.++++.++.++++.+.|..
T Consensus 258 --~~~~~------------------------~~~~~~~~~~~~q~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 309 (395)
T PRK08175 258 --ALARI------------------------KSYHDYGTFTPLQVA--AIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE 309 (395)
T ss_pred --HHHHH------------------------HhhcccCCCcHHHHH--HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21100 000112222222221 12222101111345566666677888888887
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
+ ++.+..+ .++.+.+...+... ..++..+++..|.+++||.+.+|..|...
T Consensus 310 ~-~~~~~~p----~~g~~i~i~l~~~~-----------~~~~~~~~~~~l~~~~gv~v~p~~~f~~~------------- 360 (395)
T PRK08175 310 A-GWMVEMP----KASMYVWAKIPEPY-----------AAMGSLEFAKKLLNEAKVCVSPGIGFGDY------------- 360 (395)
T ss_pred c-CCcccCC----CEEEEEEEECCccc-----------CCCCHHHHHHHHHHhCCEEEeCchhhCcC-------------
Confidence 6 5665443 23444444443210 01235678877766789999988765311
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.++++||++. .+++.+...++.|.+++..
T Consensus 361 --------------~~~~lRis~~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 361 --------------GDTHVRFALI--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred --------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 2478999996 4778888888888877753
No 167
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=3.7e-20 Score=192.17 Aligned_cols=351 Identities=12% Similarity=0.043 Sum_probs=226.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhh
Q 043646 91 RYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRD 170 (625)
Q Consensus 91 ~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (625)
...++++.+.+..-+-++ .....++++++++++|+.. .+.++|||. +|.+.+.+++
T Consensus 15 ~~e~~~v~~vl~sg~i~~-----------G~~v~~FE~~~ae~~G~k~---ava~~sgT~-AL~laL~al~--------- 70 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG-----------GPFVRRFEQAFAEYLGVKY---AVAVSSGTA-ALHLALLALA--------- 70 (374)
T ss_pred hHHHHHHHHHHHcCCeec-----------ChHHHHHHHHHHHHhCCCe---EEEecChHH-HHHHHHHhcC---------
Confidence 456666666664321111 2346778899999999973 455545554 5888878774
Q ss_pred hhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc
Q 043646 171 KLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY 249 (625)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~ 249 (625)
+.|||+ ||+++.++.+...++...|+++++|++|+ ++.+|++.++++|+ ++||+|+..|.. |..
T Consensus 71 -----ig~GDe--VI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt-----~~tKAIipVhl~---G~~ 135 (374)
T COG0399 71 -----IGPGDE--VIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAIT-----PRTKAIIPVHLA---GQP 135 (374)
T ss_pred -----CCCCCE--EEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcc-----cCCeEEEEehhc---cCC
Confidence 679996 99999999999999999999999999997 58999999999999 689999888754 999
Q ss_pred cCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCc
Q 043646 250 SDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGG 329 (625)
Q Consensus 250 ~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg 329 (625)
.|+++|.++|++||++||.|+||+.|...-+-+.+....+-+++|.+.|.++...| |+++.+++-. .+.++.+...|-
T Consensus 136 ~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~el-a~k~~~lr~hG~ 213 (374)
T COG0399 136 CDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEEL-AEKARSLRNHGL 213 (374)
T ss_pred CCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCc-eEEEeCCHHH-HHHHHHHHHhCc
Confidence 99999999999999999999999999876655444332334444556699975544 8888876542 111211111111
Q ss_pred eEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCC
Q 043646 330 TVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSV 409 (625)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~ 409 (625)
.... ...| .. .+.|...=+.-+++|+-+. +....+.+.++.+.+++++.+.|++++++.+......
T Consensus 214 ~~~~-------~~~y-~~----~~~G~N~rm~~iqAAigl~--QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~ 279 (374)
T COG0399 214 SRDA-------VFKY-LH----EELGYNYRLTEIQAAIGLA--QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDG 279 (374)
T ss_pred CCCc-------cccc-ee----eecccccCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCC
Confidence 1000 0011 11 1123221112223333333 2233567777788889999999999887665544322
Q ss_pred CCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc----hhhHhh-hc--CChhhHHHHHH
Q 043646 410 KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG----PYGHTL-LA--FDQTRSLEIRS 482 (625)
Q Consensus 410 ~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~----~~~~~~-l~--~~~~~~~~~~~ 482 (625)
...+..-+.+.-+. . +.+...+.+.|.+ .||.. +..+-. ++...+ .. ...+.+.++
T Consensus 280 ~~~~~~~~~i~~~~-----------~-~~~R~~l~~~L~~-~gi~~--~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~-- 342 (374)
T COG0399 280 AVHAWHLYTILVDE-----------E-GISRDALMESLKE-AGVGA--VVYFRPLHLQPAYRQLGYFPEGDLPNAEDL-- 342 (374)
T ss_pred ceeeeeeeEEEecC-----------C-CCCHHHHHHHHHh-CCCCc--eEEeeccccchhhhcccccccCCCchHHHH--
Confidence 22223333332211 1 4567889999966 58772 222221 111111 00 112223322
Q ss_pred HHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 483 AIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 483 ~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
....+++.++..++++|+++++++|++++..
T Consensus 343 ---------~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 343 ---------SERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred ---------hhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 3578999999999999999999999988753
No 168
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.88 E-value=7.5e-21 Score=202.42 Aligned_cols=298 Identities=21% Similarity=0.179 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHhC------CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH
Q 043646 123 VHEASNYIKRCLG------GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196 (625)
Q Consensus 123 ~~~~~~~ia~~~g------~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (625)
..++++.++++++ .+++..|+++ +|+.+++..+...+. .++|+. |+++.+.|+.+..
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~i~~~-~G~~~~~~~~~~~~~--------------~~~~~~--vlv~~P~y~~~~~ 108 (363)
T PF00155_consen 46 YPELREAIADFLGRRYGVPVDPEANILVT-SGAQAALFLLLRLLK--------------INPGDT--VLVPDPCYPSYIE 108 (363)
T ss_dssp HHHHHHHHHHHHHHHHTHHTTGGEGEEEE-SHHHHHHHHHHHHHH--------------SSTTSE--EEEEESSSTHHHH
T ss_pred hHHHHHHHHHHhhhccCcccccceEEEEe-cccccchhhhhhccc--------------cccccc--ceecCCccccccc
Confidence 4456777777777 3333267777 899999998887762 257775 9999999999999
Q ss_pred HHHHcCCeEEEEecC--CCCCCCHHHHHHHHHHhhhCC-CCeEEEEecccCccccccCHHHH---HHHHHHcCCEEEEec
Q 043646 197 SWRQSLAEVVEIGLD--DNGLLDIEALRSQLELYKAAK-RPMLGSFSACSNVTGIYSDTRSI---ARLLHQYGGFACFDF 270 (625)
Q Consensus 197 ~~~~~G~~vv~v~~~--~~~~ld~~~L~~~l~~~~~~~-~~~lv~~~~~~n~TG~~~~l~~I---~~la~~~g~~vivD~ 270 (625)
.++..|++++.++++ .++.+|+++|++.+++..... ++++|++++++||||...+.+++ +++|++||+++++|+
T Consensus 109 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De 188 (363)
T PF00155_consen 109 AARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDE 188 (363)
T ss_dssp HHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEE
T ss_pred cccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeee
Confidence 999999999999975 467899999999998532222 57899999999999999886554 555999999999999
Q ss_pred cCcCCCcc-ccC----CCCCCCCC-cEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccc
Q 043646 271 AASGPYVK-INL----RSRNIDGY-DAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 271 A~~~g~~~-id~----~~~~~~~~-D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (625)
+++..... .+. .... ... .+++.|++|.||.|+ .+|++++++++.+ .+..
T Consensus 189 ~y~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~--~l~~-------------------- 245 (363)
T PF00155_consen 189 AYSDLIFGDPDFGPIRSLLD-EDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE--RLRR-------------------- 245 (363)
T ss_dssp TTTTGBSSSSHTHHHHGHHT-TTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH--HHHH--------------------
T ss_pred ceeccccCCCccCccccccc-ccccceeeeeccccccccccccccccchhhhhh--hhhh--------------------
Confidence 97754332 111 1111 133 377789999998775 5899999877622 1100
Q ss_pred cccchhhhhcCCChhHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccC
Q 043646 344 YLEDIEERENGGTPQIVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYST 422 (625)
Q Consensus 344 ~~~~~~~~~~~gt~~~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~ 422 (625)
..... ..++..+. +...+.-......-.+.+.++.+..++++.+.|.+. ++.+..+. .+++.+...+.
T Consensus 246 ----~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~----~~~~~~~~~~~ 314 (363)
T PF00155_consen 246 ----FQRSG--LSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE----AGFFLWVRLDP 314 (363)
T ss_dssp ----HHHHT--TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS----BSSEEEEEESH
T ss_pred ----ccccc--cccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc----CccEEEEEccc
Confidence 00111 11222221 111111110000134567777888888999999777 88888663 46777766542
Q ss_pred CCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCC
Q 043646 423 TNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPY 502 (625)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~ 502 (625)
. +..++.+.|.+++||.+.+|..++. ++++||++ .
T Consensus 315 ~---------------~~~~l~~~L~~~~gi~v~pg~~~~~-----------------------------~~~iRi~~-a 349 (363)
T PF00155_consen 315 N---------------DAEELAQELLEEYGILVRPGSYFGV-----------------------------PGYIRISL-A 349 (363)
T ss_dssp H---------------HHHHHHHHHHHHHTEEEEEGGGGTS-----------------------------TTEEEEEG-G
T ss_pred c---------------hHHHHHHHHHHhCCEEEEecCCCCC-----------------------------CCEEEEEe-c
Confidence 1 2457888888877999998876651 48999999 6
Q ss_pred CCCHHHHHHHHHHH
Q 043646 503 YMSNEEFEFILAAL 516 (625)
Q Consensus 503 ~~t~edid~ll~aL 516 (625)
..+++++++++++|
T Consensus 350 ~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 350 SHSEEDLEEALERL 363 (363)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhhC
Confidence 67999999999986
No 169
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.88 E-value=4.7e-20 Score=197.21 Aligned_cols=333 Identities=15% Similarity=0.067 Sum_probs=223.1
Q ss_pred hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhh
Q 043646 90 LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMR 169 (625)
Q Consensus 90 p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~ 169 (625)
.+.+.++..+.+.++.. +.+.+..-.+.....+++++.|++++|.+. .++|. +|..+++..+......... ..
T Consensus 118 ~p~v~~a~~~ai~~yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~s-SGy~AN~~~i~aL~~~~~~--~~ 190 (476)
T PLN02955 118 HPTISNAAANAAKEYGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCP-TGFAANMAAMVAIGSVASL--LA 190 (476)
T ss_pred CHHHHHHHHHHHHHcCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEEC-ChHHHHHHHHHHHhhcccc--cc
Confidence 45677777777766532 222333444567788899999999999863 46665 8999977776543210000 00
Q ss_pred hhhhhccCCCCceEEEEcCCCCchhHHHHHHc----CCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc
Q 043646 170 DKLITSLRDEERWVVFLGPYEHHSNLLSWRQS----LAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245 (625)
Q Consensus 170 ~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~----G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~ 245 (625)
.. .....++...|++....|.|...+++.. +++++.++.+ |+++|+++|++. .++.++|++..+.++
T Consensus 191 ~~--~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~--~~~~~~Vv~EgV~Sm 261 (476)
T PLN02955 191 AS--GKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSC--KMKRKVVVTDSLFSM 261 (476)
T ss_pred cc--ccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhC--CCCceEEEEeCCCCC
Confidence 00 0001233446999999999999999876 5777777754 899999999742 234679999999999
Q ss_pred cccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCC----CC-CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCC
Q 043646 246 TGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRS----RN-IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGS 320 (625)
Q Consensus 246 TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~----~~-~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~ 320 (625)
.|.+.|+++|.++|++||+++++|+||+.|.....-+. .+ ....|+++.++.|.||..+ |+++++++..+ .
T Consensus 262 dGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G--Gfi~gs~~~~~--~ 337 (476)
T PLN02955 262 DGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG--GFIACSKKWKQ--L 337 (476)
T ss_pred CCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC--ceeecHHHHHH--H
Confidence 99999999999999999999999999997654331110 00 1267899999999998655 77888876522 1
Q ss_pred CCCcccCCceEEeeccccccccccccchhhhhcCCC---hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 321 SPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT---PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 321 ~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt---~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
+... + ..+..+| |+..+.+.+++..... + ...+++.+++.+++++.+
T Consensus 338 l~~~--~----------------------~~~ifStalpp~~aaa~laal~l~~~---~-~~~r~~L~~n~~~fr~~~-- 387 (476)
T PLN02955 338 IQSR--G----------------------RSFIFSTAIPVPMAAAAYAAVVVARK---E-KWRRKAIWERVKEFKALS-- 387 (476)
T ss_pred HHHh--C----------------------CCCeecccccHHHHHHHHHHHHHHhc---C-HHHHHHHHHHHHHHHHhc--
Confidence 1100 0 1111222 2333444455555422 2 235667777788887742
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
|+.+ ..||+.+.+.... ....+.+.|.+ .||.+.+...+++|.+
T Consensus 388 --G~~~-------~sPI~pI~ig~~~---------------~a~~~~~~L~~-~Gi~v~~i~yPtVP~g----------- 431 (476)
T PLN02955 388 --GVDI-------SSPIISLVVGNQE---------------KALKASRYLLK-SGFHVMAIRPPTVPPN----------- 431 (476)
T ss_pred --CCCC-------CCCEEEEEeCCHH---------------HHHHHHHHHHH-CCCEEEEECCCCCCCC-----------
Confidence 3322 2578877775432 23467888866 6999998777765532
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
...+||++...+|++||++++++|.++....
T Consensus 432 ---------------~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 432 ---------------SCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred ---------------CceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 2569999999999999999999999886553
No 170
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.7e-20 Score=198.58 Aligned_cols=329 Identities=15% Similarity=0.054 Sum_probs=208.3
Q ss_pred eEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--CCCCCcEEEeCChHHHHHH
Q 043646 78 LTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--GGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 78 ~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--~~~~~~vift~sGttaal~ 154 (625)
.+.|+.+.. .++|+.+.+++.+.+.....+.. .|.. .+...+.+.+.+++.+..| ++++ +|++| +|++++|.
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~--~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~-~I~it-~G~~~~l~ 102 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLN--RYPD-RDAVALRADLAAYLTAQTGVGLTVE-NVWAA-NGSNEILQ 102 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhc--cCCC-CchHHHHHHHHHHhhhhccCCCChh-hEEEC-CCHHHHHH
Confidence 355555443 35677888888876532111111 1211 1223334444444444334 4455 88887 89999999
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++.++ +++||. |++..+.|+.+....+..|++++.++.++++.+|++++++++.+ .++
T Consensus 103 ~~~~~~---------------~~~gd~--v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~----~~~ 161 (368)
T PRK03317 103 QLLQAF---------------GGPGRT--ALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAE----HRP 161 (368)
T ss_pred HHHHHh---------------cCCCCE--EEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc----cCC
Confidence 999887 478886 88888999888877888899988888776678999999999874 468
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC-cc-ccCCCCCCCCCc-EEEEcCCCCCCCCC-CceEEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY-VK-INLRSRNIDGYD-AIFLATHKFLGGPG-TPGILL 310 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~-~~-id~~~~~~~~~D-~v~~S~hK~lggp~-g~G~l~ 310 (625)
+++++++++||||.+.+.+++.++++..++++|+|++++.-. .. ...........+ +++.|++|.+|.|+ .+|+++
T Consensus 162 ~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~ 241 (368)
T PRK03317 162 DVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLA 241 (368)
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhh
Confidence 899999999999999999999999999999999999976321 11 000000000123 55669999998554 479999
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
.++++. +.+.... ...+.+.+.+. ++.+.+ ..........++....+++
T Consensus 242 ~~~~~~--~~l~~~~--------------------------~~~~~s~~~~~--a~~~~l-~~~~~~~~~~~~~~~~~~~ 290 (368)
T PRK03317 242 AAPAVV--DALRLVR--------------------------LPYHLSAVTQA--AARAAL-RHADELLASVAALRAERDR 290 (368)
T ss_pred CCHHHH--HHHHhcC--------------------------CCCCCCHHHHH--HHHHHh-hCHHHHHHHHHHHHHHHHH
Confidence 887772 2221100 00111222221 111222 1111122223344555677
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
+.+.|.+. ++.+..+. ++.+.|.... +..++.+.|.+ +||.+++. +
T Consensus 291 l~~~L~~~-g~~~~~~~----~~~~~~~~~~-----------------~~~~~~~~l~~-~Gv~v~~~---~-------- 336 (368)
T PRK03317 291 VVAWLREL-GLRVAPSD----ANFVLFGRFA-----------------DRHAVWQGLLD-RGVLIRDV---G-------- 336 (368)
T ss_pred HHHHHHHC-CCEeCCCC----CcEEEEeccC-----------------CHHHHHHHHHH-CCEEEEeC---C--------
Confidence 77888776 67665442 3333332211 24578888855 79999742 1
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++||+++ +.+++++++++|++++.
T Consensus 337 ---------------------~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 337 ---------------------IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred ---------------------CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 1489999987 78999999999998764
No 171
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.88 E-value=1.9e-20 Score=197.21 Aligned_cols=344 Identities=16% Similarity=0.109 Sum_probs=225.0
Q ss_pred HHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcE-EEeCChHHHHHHHHHHHhcccccchhhhh
Q 043646 93 IEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAI-IFCGAGTTAAIKRLQEVMGITVPSIMRDK 171 (625)
Q Consensus 93 v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~v-ift~sGttaal~~l~~~l~~~~~~~~~~~ 171 (625)
..+++.+.+. +. ++.+..+.+++.++++.++++++++.+..+ +++ ++.|.++..++..+
T Consensus 19 ~~~~~~~~~~---~~-----~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~-GsGT~a~Eaa~~nl----------- 78 (374)
T TIGR01365 19 SIEELKNAPL---GR-----SHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVP-ASDTGAVEMALWSM----------- 78 (374)
T ss_pred hHHHHhhhhc---cc-----CcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEC-CchHHHHHHHHHHc-----------
Confidence 5556655443 22 235678899999999999999998544345 556 55666677776665
Q ss_pred hhhcc-CCCCceEEEEcCCCCchhH---HHHHHcCC-eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc
Q 043646 172 LITSL-RDEERWVVFLGPYEHHSNL---LSWRQSLA-EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT 246 (625)
Q Consensus 172 ~~~~l-~~gd~~~Vlv~~~~h~s~~---~~~~~~G~-~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T 246 (625)
+ ++|++ |++.. .++.. ...+..|+ ++..+..+.+..+|+++++. . +.|+++|..+.|
T Consensus 79 ----~~~~g~~--vLv~g--~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~--------~~v~~vhnETST 140 (374)
T TIGR01365 79 ----LGCRGVD--VLAWE--SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K--------NDVVFTWNGTTS 140 (374)
T ss_pred ----CCCCCCe--EEEEC--HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C--------CCEEEecCCCch
Confidence 4 36665 55532 33332 34556798 58888877777889998872 1 126799999999
Q ss_pred ccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCC--Cc
Q 043646 247 GIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSP--PS 324 (625)
Q Consensus 247 G~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~--p~ 324 (625)
|+..|+++|+..+ ++++++||+++++|..++++. ++|+++++.+|+|++|+|+++++++++.. +... +.
T Consensus 141 Gv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d-----~iDv~~tgsQK~L~~ppGls~v~vs~~Al--~~~~~~~~ 211 (374)
T TIGR01365 141 GVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH-----KLDVVTFSWQKVLGGEGAHGMLILSPRAV--ARLESYTP 211 (374)
T ss_pred heecccccccccc--CCCcEEEEccchhcCCCCChh-----HCcEEEEechhccCCCCceEEEEECHHHH--HHHhhcCC
Confidence 9999998776433 589999999999999999987 47999999999999999999999999984 2221 11
Q ss_pred ccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE
Q 043646 325 TCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ 402 (625)
Q Consensus 325 ~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~ 402 (625)
++.+.. +.. +... ..++.+........||++..+.. .++.++. +..|++.+.+|.+++++.+++.+.+++.+.
T Consensus 212 y~~~~~--~~~-~~~~-~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~-~egGle~~~~Rh~~~a~~l~~~l~~lg~l~ 286 (374)
T TIGR01365 212 AWPLPK--IFR-LTKG-GKLNKKIFEGSTINTPSMLCVEDWLDALKWAE-SIGGLKPLIARADDNLAVLEAFVAKNNWIH 286 (374)
T ss_pred CCCChh--hhc-cccc-cchhhhhhcCCCCCChHHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 100000 000 0000 00011111223456777766643 3343332 224899999999999999999999985477
Q ss_pred EeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC-hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHH
Q 043646 403 VLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH-GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIR 481 (625)
Q Consensus 403 v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~-~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~ 481 (625)
++......+++.++....+....+ .+......+ ..++.+.|.+ +||.+.+|....
T Consensus 287 ~~~~~~~~rS~tvt~v~~~~~~~~----~~~~~~~~~~~~~~~~~l~~-~gi~i~~G~~~~------------------- 342 (374)
T TIGR01365 287 FLAETPEIRSNTSVCLKVVDPAID----ALDEDAQADFAKELISTLEK-EGVAYDIGSYRD------------------- 342 (374)
T ss_pred cCCCChhhcCCCeEEEEeCCcccc----ccccchhhHHHHHHHHHHHH-CCEEEecccccc-------------------
Confidence 776422345564444333221000 000000111 3578888855 699987664221
Q ss_pred HHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 482 SAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 482 ~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+..+||+.....+.+|++.++++|..++++
T Consensus 343 ----------~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 343 ----------APSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred ----------CCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 2477999998889999999999999988654
No 172
>PLN02271 serine hydroxymethyltransferase
Probab=99.88 E-value=6.8e-20 Score=196.52 Aligned_cols=356 Identities=16% Similarity=0.144 Sum_probs=225.6
Q ss_pred CcchHHHHHHHHHhhCCCC--CCCCCCcchhhHHH-HHHHHHHHHHHHHHhCCCCCC---cEEEeCChHHHHHHHHHHHh
Q 043646 87 GRSLRYIEDYIINNVLPFY--GNTHTSDSYVGQRM-TKMVHEASNYIKRCLGGGQAD---AIIFCGAGTTAAIKRLQEVM 160 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~~-~~~~~~~~~~ia~~~g~~~~~---~vift~sGttaal~~l~~~l 160 (625)
....+.|++++...+...| +.|+.- |+.|... .++..-+.++.+++||++.++ +|-.- ||+.+++..+.. +
T Consensus 158 N~~S~av~~algS~ltnkYaEG~pG~R-yy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~A-L 234 (586)
T PLN02271 158 NFVCRAVMEALGSHLTNKYSEGMPGAR-YYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTG-L 234 (586)
T ss_pred ccCCHHHHHHhcCcccccCCCCCCCCc-CCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHH-h
Confidence 3456678888777665544 344443 3334333 456667788899999987621 45555 788887666543 3
Q ss_pred cccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH---------HHcCCeEEEEe--cC-CCCCCCHHHHHHHHHHh
Q 043646 161 GITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW---------RQSLAEVVEIG--LD-DNGLLDIEALRSQLELY 228 (625)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---------~~~G~~vv~v~--~~-~~~~ld~~~L~~~l~~~ 228 (625)
++|||+ |+..+.+|....... ...|..+..++ ++ .++.+|.++|++.+..
T Consensus 235 ---------------l~PGD~--IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~- 296 (586)
T PLN02271 235 ---------------LLPGDR--IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD- 296 (586)
T ss_pred ---------------cCCCCE--EEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh-
Confidence 589996 888888777765432 22455444444 65 4789999999995543
Q ss_pred hhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceE
Q 043646 229 KAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGI 308 (625)
Q Consensus 229 ~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~ 308 (625)
.+|++|++.+..++ ...|+++|.++|+++|+++++|.||..|.+..++..-...++|+++++.||||.||.| |+
T Consensus 297 ---~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~ 370 (586)
T PLN02271 297 ---FRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GI 370 (586)
T ss_pred ---cCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eE
Confidence 68999999888888 6789999999999999999999999999998776533334789999999999999999 99
Q ss_pred EEEeccccccCCCCCcccCCceEEeeccccccccccccchh----hhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHH
Q 043646 309 LLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIE----ERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQE 384 (625)
Q Consensus 309 l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~----~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~ 384 (625)
++++++. .....+...+++. ......+...+. -.+..|+.+.. +++.+.++............+++
T Consensus 371 I~~r~~~--~~~~~g~~gs~s~-------~~~~~d~~~kI~~aVfPglqgGphn~~-IAalAvalkea~~~efk~Ya~QV 440 (586)
T PLN02271 371 IFYRKGP--KLRKQGMLLSHGD-------DNSHYDFEEKINFAVFPSLQGGPHNNH-IAALAIALKQVATPEYKAYMQQV 440 (586)
T ss_pred EEecccc--cccccCCcccccc-------ccccHHHHHHhhcccCCccccChhHHH-HHHHHHHHHHHhChHHHHHHHHH
Confidence 8888765 2222222222221 000011111000 13444443322 33333333211222345667777
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 385 DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
..+++.|.+.|.+. |+++++.-. ....+.+.+ +..++++..+.+.| ++.||.+..-.-+.
T Consensus 441 v~NAkaLA~~L~~~-G~~vv~ggT--dnHlvLvDl--------------~~~g~~G~~ae~~L-e~~~I~~Nkn~iP~-- 500 (586)
T PLN02271 441 KKNAQALASALLRR-KCRLVTGGT--DNHLLLWDL--------------TTLGLTGKNYEKVC-EMCHITLNKTAIFG-- 500 (586)
T ss_pred HHHHHHHHHHHHHC-CCeEeeCCC--CcceeeecC--------------cccCCCHHHHHHHH-HHcCeEeccccCCC--
Confidence 78888888888775 888876421 112222222 12356676676666 67899875322211
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHH
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY----MSNEEFEFILAALEFIAA 521 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~----~t~edid~ll~aL~~~~~ 521 (625)
.. ....++.+||..... ..++|++.+.+.|.+++.
T Consensus 501 -d~---------------------~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 501 -DN---------------------GTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred -CC---------------------CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 00 001357799987544 357999999999998876
No 173
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=5.8e-20 Score=195.63 Aligned_cols=333 Identities=14% Similarity=0.082 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
...+++++++++++|.+ ++++| +|++++|..++.+++ ++|||+ |++++++|.++..++..
T Consensus 31 ~~~~~~e~~la~~~g~~---~~v~~-~sgt~aL~~~l~al~--------------~~pGd~--Viv~~~t~~~~~~~~~~ 90 (376)
T TIGR02379 31 PFSRRCETWLENRTGTK---KALLT-PSCTAALEMAALLLD--------------IQPGDE--VIMPSYTFVSTANAFVL 90 (376)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHcC--------------CCCcCE--EEECCCCcHHHHHHHHH
Confidence 35677889999998874 68888 677778888877763 578986 99999999999989999
Q ss_pred cCCeEEEEecCCC-CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc
Q 043646 201 SLAEVVEIGLDDN-GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI 279 (625)
Q Consensus 201 ~G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i 279 (625)
.|++++.++++++ ..+|+++++++++ +++++|+ ++|++|...|+++|.++|++||+++|+|+||+.+.. .
T Consensus 91 ~G~~~v~vd~d~~~~~~d~~~le~~i~-----~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~-~ 161 (376)
T TIGR02379 91 RGAKIVFVDIRPDTMNIDETLIESAIT-----HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMST-Y 161 (376)
T ss_pred cCCEEEEEecCCCcCCCCHHHHHHhcC-----cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCc-c
Confidence 9999999999875 5799999999987 5789886 456789999999999999999999999999998764 2
Q ss_pred cCCCCCCCCCcEEEEcCCC--CCC-CCCCceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC
Q 043646 280 NLRSRNIDGYDAIFLATHK--FLG-GPGTPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK--~lg-gp~g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
+-+..+. ..|+.++|+|+ .+. |+.| |++++++ ++ .+.+++....|....... +.......+......++.+
T Consensus 162 ~~~~~g~-~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~--~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~g~n~~~~ 236 (376)
T TIGR02379 162 KGRALGS-IGHLGTFSFHETKNYTSGGEG-GALLINDQAF--IERAEIIREKGTNRSQFF-RGEVDKYTWRDIGSSYLPS 236 (376)
T ss_pred CCcccCC-CCCEEEEeCCCCCcCcccCCc-eEEEECCHHH--HHHHHHHHHhCCCCcccc-ccCCCcceeeeecccCCcc
Confidence 3223211 23777888764 443 2343 7777764 44 223333332221100000 0000000000011111111
Q ss_pred ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC--c-EEEeCCCCCCCcceEEEEeccCCCCCCccccc
Q 043646 356 TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ--N-IQVLGNTSVKRQAILSFLVYSTTNSSPENMKI 432 (625)
Q Consensus 356 t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~--g-v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~ 432 (625)
.+. +++-.. +....+.+.++.++++++..+.|..++ + +++....+........|.+.-..
T Consensus 237 --~~~----Aa~g~~--qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------- 299 (376)
T TIGR02379 237 --ELQ----AAYLWA--QLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD--------- 299 (376)
T ss_pred --HHH----HHHHHH--HHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC---------
Confidence 122 222211 112245566666777888888887764 2 33322111111122223332111
Q ss_pred cCCCCCChHHHHHHhhhhcCeeeecCCCCCc--hhhHhhh--cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 433 ERNKPLHGPFVATLFNDLFGIQARGGCACAG--PYGHTLL--AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 433 ~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~--~~~~~~l--~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
..+..++.+.|.+ +||.++.+..+.. |....+. .-+.+.++++ ....+.+.++..+|++|
T Consensus 300 ----~~~r~~l~~~L~~-~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~-----------~~~~l~LP~~~~l~~~~ 363 (376)
T TIGR02379 300 ----EDDRNELIKYLKE-QEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKE-----------SERLVRLPLYYGLSKED 363 (376)
T ss_pred ----cCCHHHHHHHHHH-CCCCccccCcCCCcchhHHhhCCCCCCChHHHHH-----------HhceEEccCCCCCCHHH
Confidence 1246789999955 7999885543221 1100010 0011222222 24679999999999999
Q ss_pred HHHHHHHHHHHH
Q 043646 509 FEFILAALEFIA 520 (625)
Q Consensus 509 id~ll~aL~~~~ 520 (625)
+++++++|++++
T Consensus 364 ~~~i~~~i~~~~ 375 (376)
T TIGR02379 364 QARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHh
Confidence 999999999764
No 174
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=1.4e-20 Score=203.57 Aligned_cols=304 Identities=14% Similarity=0.171 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH--
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-- 198 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (625)
...++++++++++.|.+. .++|+ +|+ +++..+.. + +++||+ |+++...|.++...+
T Consensus 133 pt~~aLE~~lA~leg~e~--ai~~~-SG~-aAi~~il~-l---------------l~~GD~--VI~~~~~y~~t~~ll~~ 190 (464)
T PLN02509 133 PTRDALESLLAKLDKADR--AFCFT-SGM-AALSAVTH-L---------------IKNGEE--IVAGDDVYGGSDRLLSQ 190 (464)
T ss_pred HHHHHHHHHHHHHhCCCE--EEEeC-cHH-HHHHHHHH-H---------------hCCCCE--EEEcCCchhhHHHHHHH
Confidence 467889999999998642 35554 665 56766554 3 478996 889999998876443
Q ss_pred --HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 199 --RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 199 --~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
...|++++.++. .|+++++++++ +++++|++++++||+|.+.|+++|+++||+||+++++|+|++.++
T Consensus 191 ~l~~~G~~v~~vd~-----~d~e~l~~ai~-----~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 191 VVPRSGVVVKRVNT-----TNLDEVAAAIG-----PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HHHHCCeEEEEeCC-----CCHHHHHHhCC-----cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 356999888864 37899998887 689999999999999999999999999999999999999998887
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
....+. . ++|++++|++||++|+++ .|+++++++.. ...+.. .+...
T Consensus 261 ~~~pl~-~---gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l-~~~~~~--------------------------~~~~~ 309 (464)
T PLN02509 261 LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGEKL-AKEVYF--------------------------LQNSE 309 (464)
T ss_pred cCChhh-c---CCcEEEecCcccccCCCccceeEEEeccHHH-HHHHHH--------------------------HHHhc
Confidence 543332 2 789999999999998876 57777765531 000000 00011
Q ss_pred CC--hhHHH-HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCC--C-----------CCCcceEEE
Q 043646 355 GT--PQIVQ-MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNT--S-----------VKRQAILSF 417 (625)
Q Consensus 355 gt--~~~~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~--~-----------~~~~~i~~f 417 (625)
|+ .+..+ ++..+++ -.+.+.++..+++.++.+.|++.|.| +|+.|. + ..-+++++|
T Consensus 310 g~~l~p~~A~l~lr~L~-------tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf 382 (464)
T PLN02509 310 GSGLAPFDCWLCLRGIK-------TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSF 382 (464)
T ss_pred CCCcCHHHHHHHHhhhh-------hHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEE
Confidence 11 11111 1111121 23455667777899999999999887 455442 0 123678888
Q ss_pred EeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCc
Q 043646 418 LVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPG 494 (625)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g 494 (625)
.+ .+.. ....+++.| +.+.+.+.-|...+. |.......+..+.-. ..|+.++
T Consensus 383 ~~-~~~~--------------~~~~f~~~l-~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~---------~~Gi~~~ 437 (464)
T PLN02509 383 IT-GSVA--------------LSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVRE---------ARGLTED 437 (464)
T ss_pred Ee-CCHH--------------HHHHHHHcC-CcceEcccCCCCCceeeCCcccccccCCHHHHH---------hcCCCCC
Confidence 77 2210 123455555 445555554443221 211111222221111 2567789
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 495 WTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 495 ~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.||||+|. ||++.|++-|++.++.+
T Consensus 438 liRlSvGl----E~~~DLi~Dl~~Al~~~ 462 (464)
T PLN02509 438 LVRISAGI----EDVDDLISDLDIAFRTG 462 (464)
T ss_pred eEEEEecc----CCHHHHHHHHHHHHccc
Confidence 99999996 56777777777766543
No 175
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=1.5e-20 Score=201.12 Aligned_cols=307 Identities=16% Similarity=0.132 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH--
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-- 197 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-- 197 (625)
....+++++.+++++|.+. .++++ +|+. ++..++.++ +++||+ |+++...|.+....
T Consensus 62 ~p~~~~le~~lA~l~g~~~--av~~~-sG~~-Ai~~al~al---------------~~~Gd~--Vl~~~~~y~~t~~~~~ 120 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAED--ARGFA-SGMA-AISSTVLSF---------------VEPGDR--IVAVRHVYPDAFRLFE 120 (389)
T ss_pred ChhHHHHHHHHHHHhCCCc--EEEEC-CHHH-HHHHHHHHH---------------hCCCCE--EEEeCCCchHHHHHHH
Confidence 3457889999999999863 46664 7775 566555554 578986 88888888876543
Q ss_pred --HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 198 --WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 198 --~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
....|++++.++.+ |++++++++. ++++|++++++|+++.+.|+++|+++||++|+++++|++++.+
T Consensus 121 ~~~~~~G~~v~~vd~~-----d~~~l~~~i~------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 121 TILKRMGVEVDYVDGR-----DEEAVAKALP------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred HHHHHcCceEEEeCCC-----CHHHHHHhcc------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 34469999988754 7888888763 5899999999999999999999999999999999999998876
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
.....+ .+ ++|++++|++|+++||++ .|+++.++++. +.+.... ....
T Consensus 190 ~~~~p~-~~---g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~--~~l~~~~------------------------~~~~ 239 (389)
T PRK05968 190 VFQRPI-TL---GVDLVIHSASKYLGGHSDTVAGVVAGSKEHI--ARINAEA------------------------YPYL 239 (389)
T ss_pred hccCch-hc---CCcEEEeeccccccCCCCeEEEEEEECHHHH--HHHHHHH------------------------HHhC
Confidence 532222 22 789999999999998865 57777777652 2211100 0000
Q ss_pred CCCh-hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeC-CCC--------CCCcceEEEEeccCC
Q 043646 354 GGTP-QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLG-NTS--------VKRQAILSFLVYSTT 423 (625)
Q Consensus 354 ~gt~-~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~-~~~--------~~~~~i~~f~~~~~~ 423 (625)
.+.. ++.+. +.. ..........++..+.++++.+.|+++|+++.+. |.- ...+++++|.+..+
T Consensus 240 g~~~~~~~A~----~~l--~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~- 312 (389)
T PRK05968 240 GAKLSPFEAW----LLL--RGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG- 312 (389)
T ss_pred CCCCChHHHH----HHH--cccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-
Confidence 1111 11111 111 1222344455555666999999999999885443 310 12456888887421
Q ss_pred CCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc--hhhHhhhcC-ChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 424 NSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG--PYGHTLLAF-DQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~--~~~~~~l~~-~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
.+...+++.| +.+++.++-|..|+- |....+... ..+.. ...|+.++.+|+|+
T Consensus 313 --------------~~~~~f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~---------~~~gi~~~liR~Sv 368 (389)
T PRK05968 313 --------------IDVRAFADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQPNSA---------ARFGVSPRSVRLHV 368 (389)
T ss_pred --------------HHHHHHHHhC-CccEEecCCCCCCceeeeCcccccccCCHHHH---------HhcCCCCCeEEEEe
Confidence 2356788888 568899998888762 211110110 01111 11356679999999
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 043646 501 PYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 501 ~~~~t~edid~ll~aL~~~ 519 (625)
|+.++++=++.+-++|+.+
T Consensus 369 GlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 369 GLEGTEALWADLEQALAAA 387 (389)
T ss_pred ccCCHHHHHHHHHHHHHHh
Confidence 9987766667776666643
No 176
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.3e-19 Score=193.63 Aligned_cols=329 Identities=13% Similarity=-0.026 Sum_probs=204.9
Q ss_pred eEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC--------CCCCCcEEEeCCh
Q 043646 78 LTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG--------GGQADAIIFCGAG 148 (625)
Q Consensus 78 ~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g--------~~~~~~vift~sG 148 (625)
.+.|+.+... ++|+.+.+++.+.+.... +. . .|.. .+ ..++|++|+++++ ++++ +|++| +|
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~Y~~-~G----~~~Lr~aia~~~~~~~~~~~~v~~~-~I~it-~G 99 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGI-ES-N-RYPD-GG----HEALKQAIAEYVNESAAGSSQITPA-NISVG-NG 99 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcc-cc-c-CCCC-Cc----hHHHHHHHHHHhCccccccCCCCHH-HEEEc-CC
Confidence 5566655544 466788888877653210 00 0 1111 11 2446667777766 5555 89998 89
Q ss_pred HHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHH
Q 043646 149 TTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLEL 227 (625)
Q Consensus 149 ttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~ 227 (625)
++++|..++.++ +.+|+. .|+++.+.|+.+...++..|++++.++++. +..+|+++|++++++
T Consensus 100 a~~al~~~~~~~---------------~~~g~~-~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~ 163 (374)
T PRK02610 100 SDELIRSLLIAT---------------CLGGEG-SILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQ 163 (374)
T ss_pred hHHHHHHHHHHH---------------cCCCCC-eEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHh
Confidence 999998776655 345652 489999999999888899999999999876 468999999998863
Q ss_pred hhhCCCCeEEEEecccCccccccCHHHHHHHHHH-cCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC-C
Q 043646 228 YKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ-YGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG-T 305 (625)
Q Consensus 228 ~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~-~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~-g 305 (625)
. ...+++++++++++||||.+.+.+++.++++- +++++|+|+++.--.....+.......--+++.|++|.||.|+ .
T Consensus 164 ~-~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlR 242 (374)
T PRK02610 164 T-QNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHR 242 (374)
T ss_pred h-cCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccc
Confidence 1 11378999999999999999998776666532 4899999999652111101111110011256779999998675 4
Q ss_pred ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcC-HHHHHHHH
Q 043646 306 PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIG-YEVIKKQE 384 (625)
Q Consensus 306 ~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g-~~~i~~~~ 384 (625)
+|+++.++++. +.+.... ...+.+.+.+.+ +...+ .+... .+.+...
T Consensus 243 iG~~v~~~~l~--~~l~~~~--------------------------~~~~~~~~~q~a--~~~~l-~~~~~~~~~~~~~- 290 (374)
T PRK02610 243 VGYAIGHPELI--AVLEKVR--------------------------LPYNLPSFSQLA--AQLAL-EHRQELLAAIPEI- 290 (374)
T ss_pred eeeeecCHHHH--HHHHHhc--------------------------CCCCCCHHHHHH--HHHHh-cCHHHHHHHHHHH-
Confidence 89999887762 2221100 001122222221 11111 11111 2223323
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 385 DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
.+.++.+.+.|+.++++.+. + ..+.+.|.-.+. .++..++++.| .++||.++.+
T Consensus 291 ~~~r~~l~~~L~~~~~~~~~-p----~~g~f~~~~l~~--------------~~~~~~~~~~l-~~~gi~v~~~------ 344 (374)
T PRK02610 291 LQERDRLYQALQELPQLRVW-P----SAANFLYLRLSQ--------------DAALAALHQAL-KAQGTLVRHT------ 344 (374)
T ss_pred HHHHHHHHHHHHhCCCcEeC-C----CcceEEEEeCCC--------------CCCHHHHHHHH-HHCCEEEEeC------
Confidence 23356677778777777654 3 234554444332 13456788887 4589999731
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
++++||+++ +.+++++++++|++++..
T Consensus 345 ----------------------------~~~lRls~~---~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 345 ----------------------------GGGLRITIG---TPEENQRTLERLQAALTQ 371 (374)
T ss_pred ----------------------------CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 378999997 568899999999988754
No 177
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.87 E-value=9.9e-20 Score=195.18 Aligned_cols=343 Identities=12% Similarity=0.064 Sum_probs=213.5
Q ss_pred HHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhh
Q 043646 91 RYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRD 170 (625)
Q Consensus 91 ~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (625)
+.+.+++.+.+.++..+... +...+.......++++++++++|.+ + .++|+ +|+++++..+.. +
T Consensus 15 ~~~~~~~~~a~~~~g~~~~~--sr~~yg~~~~~~~LE~~lA~~~g~e-~-al~~~-sG~~a~~~~i~~-l---------- 78 (392)
T PLN03227 15 PTLRQTALESLSHYGCGSCG--PRGFYGTIDAHLELEQCMAEFLGTE-S-AILYS-DGASTTSSTVAA-F---------- 78 (392)
T ss_pred HHHHHHHHHHHHHhCCCCcc--cccccCChHHHHHHHHHHHHHhCCC-c-EEEec-CcHHHHHHHHHH-h----------
Confidence 35666666666554322222 1111233447889999999999986 3 67886 899998855544 3
Q ss_pred hhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhh---------hCCCCeEEEEec
Q 043646 171 KLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYK---------AAKRPMLGSFSA 241 (625)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~---------~~~~~~lv~~~~ 241 (625)
+++||. |+++...|.++...++..+++++.++.+ |++++++.+.... ..+++++|+++.
T Consensus 79 -----~~~GD~--Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 79 -----AKRGDL--LVVDRGVNEALLVGVSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred -----CCCCCE--EEEeccccHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 478985 9999999999998888888888877754 4555555443211 113689999999
Q ss_pred ccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc---------cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEe
Q 043646 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI---------NLRSRNIDGYDAIFLATHKFLGGPGTPGILLIS 312 (625)
Q Consensus 242 ~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i---------d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~ 312 (625)
+.|++|.+.|+++|.++|++||+++++|++|++|...- ++.+ ..++|++++|++|.+| |.| |+++.+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p--~~~~Div~~slsk~~g-~~g-g~v~~~ 222 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKP--MVHAEIVTFSLENAFG-SVG-GMTVGS 222 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCC--CCCceEEEeechhhhh-ccC-cEEecC
Confidence 99999999999999999999999999999998664321 1221 1367999999999987 554 777778
Q ss_pred ccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 043646 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESA 391 (625)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l 391 (625)
+++.. .+... +.+ ..+....+++... ..+++.... . .+.+.++.+++.+++
T Consensus 223 ~~~~~--~~~~~--~~~--------------------~~~~~~~~p~~~~aa~~al~~~~---~-~~~~~~~l~~~~~~l 274 (392)
T PLN03227 223 EEVVD--HQRLS--GSG--------------------YCFSASAPPFLAKADATATAGEL---A-GPQLLNRLHDSIANL 274 (392)
T ss_pred HHHHH--HHHHh--CcC--------------------ccccCCCCHHHHHHHHHHHHHHh---c-CHHHHHHHHHHHHHH
Confidence 77631 11110 000 0011112333222 222332221 1 245677788889999
Q ss_pred HHhhCCCCcEEEeCCC-------CCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCch
Q 043646 392 LGRILPNQNIQVLGNT-------SVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGP 464 (625)
Q Consensus 392 ~~~L~~l~gv~v~~~~-------~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~ 464 (625)
++.|.+. +...+... ....++++.+.+.+... . . ......-...+++.+.+ +||.++....+.
T Consensus 275 ~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~-~----~-~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~-- 344 (392)
T PLN03227 275 YSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEA-T----R-RTDETLILDQIAHHSLS-EGVAVVSTGGHV-- 344 (392)
T ss_pred HHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHH-h----h-hhhhhhHHHHHHHHHHH-CCCEEEeccccc--
Confidence 9988642 22111100 01245677776633110 0 0 00000012367777755 699886321110
Q ss_pred hhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 465 YGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 465 ~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
... +.-+++..+|++++..+|++|+++++++|++++...
T Consensus 345 -~~~-------------------~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 345 -KKF-------------------LQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred -CCc-------------------CCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 011246789999999999999999999999998764
No 178
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=2.7e-20 Score=198.09 Aligned_cols=308 Identities=13% Similarity=0.076 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
......+++.++++.|. + .++++ +|+++++..++.++ +++||. |+++.+.|.+....+.
T Consensus 52 npt~~~Le~~lA~leg~--e-~ivvt-~gg~~Ai~~~l~al---------------l~~Gd~--Il~~~~~y~~~~~~~~ 110 (388)
T PRK08861 52 NPNRGLLEQTLSELESG--K-GAVVT-NCGTSALNLWVSAL---------------LGPDDL--IVAPHDCYGGTYRLFN 110 (388)
T ss_pred CchHHHHHHHHHHHhCC--C-eEEEE-CCHHHHHHHHHHHH---------------cCCCCE--EEEcCCchHHHHHHHH
Confidence 34466799999999995 2 67887 67888898888876 578885 8888888887655442
Q ss_pred ----HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 200 ----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 200 ----~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
..|++++.++. .|+++++++++ ++|++|++++|+||||.+.|+++|+++|+++|+++++|++++.+
T Consensus 111 ~~~~~~gi~v~~vd~-----~d~e~l~~~i~-----~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~ 180 (388)
T PRK08861 111 TRANKGDFKVQFVDQ-----SDAAALDAALA-----KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTP 180 (388)
T ss_pred HHHhcCCeEEEEECC-----CCHHHHHHhcC-----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccc
Confidence 24678777753 48899999887 58999999999999999999999999999999999999999877
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
....++. + ++|+++.|.|||++|+.+ .|+++.+++.. .+.++ ..+..
T Consensus 181 ~~~~pl~-~---GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~-~~~~~--------------------------~~~~~ 229 (388)
T PRK08861 181 VLQKPLE-L---GADFVIHSTTKYINGHSDVIGGVLITKTKEH-AEELA--------------------------WWGNC 229 (388)
T ss_pred ccCCCcc-c---CCCEEEeecceeccCCCcceeEEEEecHHHH-HHHHH--------------------------HHHhc
Confidence 5443332 2 899999999999999875 46666654321 11110 01111
Q ss_pred CCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEE
Q 043646 354 GGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFL 418 (625)
Q Consensus 354 ~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~ 418 (625)
.|. .+.... . +++........+.++..+.+..+.++|++.|.|. |+.|.- ..-+++++|.
T Consensus 230 ~G~~~~p~~a---~--l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~ 304 (388)
T PRK08861 230 IGATGTPFDS---Y--MTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFE 304 (388)
T ss_pred cCCCCChHHH---H--HHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEE
Confidence 122 111111 0 1111222344445566667888999999888874 554420 1246788888
Q ss_pred eccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcE
Q 043646 419 VYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGW 495 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~ 495 (625)
+..+. + ....+++.| +.+.+.+.-|...+. |.......+..+.-. ..|+.++.
T Consensus 305 ~~~~~--~------------~~~~f~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~---------~~gi~~~l 360 (388)
T PRK08861 305 FAGSF--E------------QLKVFVKAL-ALFSLAESLGGVESLICHPASMTHRAMGEEALA---------EAGVSQQL 360 (388)
T ss_pred eCCCH--H------------HHHHHHhcC-CcceEccCCCCCcceeeCCCcccccccCHHHHH---------hcCCCCCe
Confidence 74211 0 022344545 344444444432210 111111122211111 25677899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHH
Q 043646 496 TRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 496 iRis~~~~~t~edid~ll~aL~~ 518 (625)
||||+|.-..++=++.|-++|+.
T Consensus 361 iRlsvGlE~~~dli~Dl~~al~~ 383 (388)
T PRK08861 361 LRLSVGLEDAQDLIADLDQAFAK 383 (388)
T ss_pred EEEEeCcCCHHHHHHHHHHHHHH
Confidence 99999974443334444444443
No 179
>PRK05839 hypothetical protein; Provisional
Probab=99.87 E-value=8.2e-20 Score=195.17 Aligned_cols=331 Identities=14% Similarity=0.064 Sum_probs=204.1
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAA 152 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaa 152 (625)
+..+.|+.+... +.++.+.+++.+....... |....+..++.+.+.+++++.+|. +++ +|++| +|++++
T Consensus 24 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~------Y~~~~G~~~lr~aia~~l~~~~g~~~~~~-~I~it-~G~~~a 95 (374)
T PRK05839 24 YKGLDLTIGEPQFETPKFIQDALKNNAHLLNK------YPKSAGEESLREAQRGFFKRRFKIELKEN-ELIPT-FGTREV 95 (374)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHhhccCC------CCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEe-cCcHHH
Confidence 356666654433 3467777777664422111 111122345666777777777774 454 89998 899999
Q ss_pred HHHHHHHhcccccchhhhhhhhcc-CCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhh
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSL-RDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYK 229 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~ 229 (625)
|..++.++. . ++|| .|+++.+.|+.+...++..|++++.++++.+ ..+|+.+. .+
T Consensus 96 l~~~~~~~~--------------~~~~gd--~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~---- 153 (374)
T PRK05839 96 LFNFPQFVL--------------FDKQNP--TIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL---- 153 (374)
T ss_pred HHHHHHHHh--------------cCCCCC--EEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hh----
Confidence 988877651 1 3566 4999999999998888999999999999753 34554332 22
Q ss_pred hCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCccccCCCC-C------CC--CCcEEEEcCC
Q 043646 230 AAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVKINLRSR-N------ID--GYDAIFLATH 297 (625)
Q Consensus 230 ~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~-~------~~--~~D~v~~S~h 297 (625)
.++++|++++|+||||.+.+ +++|+++|+++|+++++|++++--+..-..... . .. .--+++.|++
T Consensus 154 --~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfS 231 (374)
T PRK05839 154 --QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSIS 231 (374)
T ss_pred --ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccc
Confidence 36899999999999999977 466778889999999999996531110000000 0 00 1226677999
Q ss_pred CCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcC
Q 043646 298 KFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIG 376 (625)
Q Consensus 298 K~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g 376 (625)
|.|+.|+ .+|+++.++++. ..+... ......+++.+.+.+ +...+ ....-
T Consensus 232 K~~~~~GlRiG~ii~~~~~~--~~~~~~------------------------~~~~~~~~~~~~q~~--~~~~l-~~~~~ 282 (374)
T PRK05839 232 KRSSAPGLRSGFIAGDASIL--KKYKAY------------------------RTYLGCASPLPLQKA--AAVAW-LDDEH 282 (374)
T ss_pred cccCCccceeEEEecCHHHH--HHHHHH------------------------HhhcCCCCChHHHHH--HHHHh-ccchH
Confidence 9987675 489999887762 111000 000011223332321 11122 12222
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee
Q 043646 377 YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR 456 (625)
Q Consensus 377 ~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~ 456 (625)
.+.++++.++.++.+.+.|. +. .+ .++.+.+.-.++ ..++++.|.+++||.++
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~----~~--~p----~gg~fi~~~~~~-----------------~~~~~~~l~~~~gi~v~ 335 (374)
T PRK05839 283 AEFFRNIYAKNLKLAREILG----IT--IP----PATFYVWLPVDN-----------------DEEFTKKLYQNEGIKVL 335 (374)
T ss_pred HHHHHHHHHHHHHHHHHhcC----CC--CC----CeeEEEEEeCCC-----------------hHHHHHHHHHHCCEEEe
Confidence 34455555555666665542 22 12 234444443321 34677888666899999
Q ss_pred cCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 457 GGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 457 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
+|..|+.+ +..++++||+++. +++++...++.|+++++
T Consensus 336 pg~~f~~~-------------------------~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 336 PGSFLGRN-------------------------GIGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred CchhhCCC-------------------------CCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 98765411 1125899999973 68999999999988764
No 180
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.87 E-value=4.7e-19 Score=192.69 Aligned_cols=404 Identities=14% Similarity=0.064 Sum_probs=239.6
Q ss_pred ccccccCCCCCCCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchh
Q 043646 36 CSEFKNDHHPPHSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYV 115 (625)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~ 115 (625)
+..++...++....+.+...+.+++.-. ..+.-..|. .+.|..+-.... .+.+++.+.+.. +. . .|..
T Consensus 9 ~~~r~~~v~~~~~~~~~~~~~~l~~~g~---~~~~L~~g~---p~~D~~tds~t~-a~~~a~~~a~~~--g~--~-~Y~~ 76 (460)
T PRK13238 9 EPFRIKMVEPIRLTTREERERALAEAGY---NPFLLKSED---VFIDLLTDSGTG-AMSDRQWAAMMR--GD--E-AYAG 76 (460)
T ss_pred cceeeceeccccccCHHHHHHHHHHcCC---CEEeCCCCC---CCCCCCCCCCch-hhhHHHHHHHHh--CC--c-ccCC
Confidence 4455555556666777777777765432 123333332 234433322111 345555444421 11 0 1211
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH
Q 043646 116 GQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL 195 (625)
Q Consensus 116 ~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (625)
+ .-..++++.++++++.. .+++| +|+++++..++.++ ++||| |+++.+.|.++.
T Consensus 77 ~----~g~~~Lreaia~~~~~~---~vv~t-~ggt~A~~~~~~al---------------l~pGD---Vii~~p~~~~~~ 130 (460)
T PRK13238 77 S----RSYYRLEDAVKDIFGYP---YTIPT-HQGRAAEQILFPVL---------------IKKGD---VVPSNYHFDTTR 130 (460)
T ss_pred C----CCHHHHHHHHHHHhCCC---cEEEC-CCHHHHHHHHHHHh---------------CCCCC---EEccCCcccchH
Confidence 1 12456888999999874 68888 67777788887776 68998 667777777776
Q ss_pred HHHHHcCCeEEEEecCC----------CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccc-cccC---HHHHHHHHHH
Q 043646 196 LSWRQSLAEVVEIGLDD----------NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTG-IYSD---TRSIARLLHQ 261 (625)
Q Consensus 196 ~~~~~~G~~vv~v~~~~----------~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG-~~~~---l~~I~~la~~ 261 (625)
..+...|++++.+++++ .|.+|+++|++++++. ..+++++|++++++|+|| .+.+ +++|.++|++
T Consensus 131 ~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~-~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~ 209 (460)
T PRK13238 131 AHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEV-GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKK 209 (460)
T ss_pred HHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhc-CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 66778899999999853 2459999999999841 113699999999999998 6655 6789999999
Q ss_pred cCCEEEEeccCcCC-----------CccccCCCC---CCCCCcEEEEcCCCCCCCCCCceEEEEec-cccccCCCCCccc
Q 043646 262 YGGFACFDFAASGP-----------YVKINLRSR---NIDGYDAIFLATHKFLGGPGTPGILLISK-ALYQLGSSPPSTC 326 (625)
Q Consensus 262 ~g~~vivD~A~~~g-----------~~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~l~v~~-~~~~l~~~~p~~~ 326 (625)
||+++++|+|+... +....+..+ -....|++++|++|.+.+|.| |+++.++ ++. ..++....
T Consensus 210 ~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~--~~~~~~~~ 286 (460)
T PRK13238 210 YGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLF--TECRTLCI 286 (460)
T ss_pred cCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHH--HHhhhccc
Confidence 99999999987542 222222111 012579999999999888886 8888885 452 22222211
Q ss_pred CCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCC
Q 043646 327 GGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGN 406 (625)
Q Consensus 327 ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~ 406 (625)
.. +.....|..+... .+|++..+.+....+.+..+.. .++++.+.|.+. |+.+..|
T Consensus 287 ~~--------------------~g~~t~~g~~~~~--~~Ala~~l~e~~~~~~~~~~~~-~~~~l~~~L~~~-G~~~~~p 342 (460)
T PRK13238 287 LY--------------------EGFPTYGGLAGRD--MEALAVGLYEGMDEDYLAYRIG-QVEYLGEGLEEA-GVPIQTP 342 (460)
T ss_pred cc--------------------CCcccccCcHHHH--HHHHHhhHHHhhChHHHHHHHH-HHHHHHHHHHHC-CCCeEcc
Confidence 00 0000123322221 1222221112222233333322 468888999876 8888877
Q ss_pred CCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHh
Q 043646 407 TSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQK 486 (625)
Q Consensus 407 ~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 486 (625)
. ++++.|.-....... ..+.+.....++..|.++.||.+.++..+..+... ..+.. .
T Consensus 343 ~----Gg~~v~~d~~~~~~~------~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~-~~~~~--~---------- 399 (460)
T PRK13238 343 A----GGHAVFVDAGKFLPH------IPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP-KTGEQ--L---------- 399 (460)
T ss_pred C----CceEEEEEchhcCCC------CCCCCCchHHHHHHHHHHcCeeeecccceecccCC-CCccc--c----------
Confidence 4 344444332211000 01112234668888888999999877655422100 00000 0
Q ss_pred CCCCCCCcEEEEecCC-CCCHHHHHHHHHHHHHHHHhhhhcccCccc
Q 043646 487 GYLGVKPGWTRITFPY-YMSNEEFEFILAALEFIAAYGHRFLPLYHF 532 (625)
Q Consensus 487 g~~g~~~g~iRis~~~-~~t~edid~ll~aL~~~~~~~~~~~~~y~~ 532 (625)
--....+|+++.- --|.++++.+.++|+.+.++... ++-|.|
T Consensus 400 ---~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 442 (460)
T PRK13238 400 ---PAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRES-IKGLRF 442 (460)
T ss_pred ---CCccceEEEecccccCCHHHHHHHHHHHHHHHHhHhh-cCCeEE
Confidence 0024789999972 33889999999999998866433 444444
No 181
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.87 E-value=3.8e-20 Score=194.35 Aligned_cols=276 Identities=19% Similarity=0.162 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC
Q 043646 124 HEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA 203 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (625)
.++|+++++++|.+++ +|++| +|+++++..+..++ .+| + |++..+.|..+...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-~i~~t-~G~~~~i~~~~~~l----------------~~g-~--vl~~~p~y~~~~~~~~~~g~ 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-SVLPV-NGAQEAIYLLPRLL----------------APG-R--VLVLAPTYSEYARAWRAAGH 108 (330)
T ss_pred HHHHHHHHHHhCCChh-hEEEC-CCHHHHHHHHHHHh----------------CCC-e--EEEeCCCcHHHHHHHHHcCC
Confidence 6789999999998766 79998 89999999876654 455 3 78888889998888888999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCcccc
Q 043646 204 EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVKIN 280 (625)
Q Consensus 204 ~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~~id 280 (625)
+++.++ |++.+++++. +++++++++|+||||.+.+ +++|+++|+++|+++++|+++.......+
T Consensus 109 ~~~~~~-------d~~~l~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 175 (330)
T TIGR01140 109 EVVELP-------DLDRLPAALE------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDAS 175 (330)
T ss_pred EEEEeC-------CHHHHHhhcc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccc
Confidence 998887 7888888774 4679999999999999998 56678888999999999999753221112
Q ss_pred CCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChh
Q 043646 281 LRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358 (625)
Q Consensus 281 ~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~ 358 (625)
+... .....++++.|++|+||.|+ ++|++++++++. ..+.+... ..+.+
T Consensus 176 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~--~~l~~~~~---------------------------~~~~s 226 (330)
T TIGR01140 176 LAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALL--ARLREALG---------------------------PWTVN 226 (330)
T ss_pred hhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHH--HHHHhcCC---------------------------CCCch
Confidence 2111 01134688889999998564 479999988762 22221110 01112
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 359 IVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 359 ~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
..+ ..++..++ .+....+.++++.+.+++++.+.|++++.+++..+ .+.+.+.-.+
T Consensus 227 ~~~-q~~~~~~l-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~f~~~~~~----------------- 282 (330)
T TIGR01140 227 GPA-RAAGRAAL-ADTAWQAATRARLAAERARLAALLARLGGLEVVGG-----TALFLLVRTP----------------- 282 (330)
T ss_pred HHH-HHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-----CCeEEEEEcC-----------------
Confidence 121 12222333 22222346677888889999999998866665432 2444333222
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
+..++++.|.+ +||.+++|..+.+ ..++++||+++. ..++ ++++++|+
T Consensus 283 ~~~~l~~~l~~-~gi~v~pg~~f~~---------------------------~~~~~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 283 DAAALHEALAR-RGILIRDFDNFPG---------------------------LDPRYLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred CHHHHHHHHHH-CCEEEEECCCCCC---------------------------CCCCEEEEEecC--HHHH-HHHHHhhC
Confidence 14578888876 7999999987631 124799999973 3344 88888763
No 182
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=5.4e-20 Score=195.78 Aligned_cols=291 Identities=16% Similarity=0.060 Sum_probs=193.6
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC
Q 043646 124 HEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA 203 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (625)
.++|+.+++++|++++ +|++| +|++++|..++.++ +.+|+. .|+++.+.|..+....+..|+
T Consensus 62 ~~lr~~ia~~~~~~~~-~I~~t-~G~~~~l~~~~~~~---------------~~~g~~-~vlv~~p~y~~~~~~~~~~g~ 123 (364)
T PRK04781 62 PGLRSALAALYGCAPE-QLLIG-RGSDEAIDLLVRAL---------------CVPGRD-AVLVTPPVFGMYAVCARLQNA 123 (364)
T ss_pred HHHHHHHHHHhCcChH-HEEEe-CCHHHHHHHHHHHh---------------cCCCCC-eEEEcCCChHHHHHHHHHcCC
Confidence 5688999999999876 89998 89999999998887 467732 488888887766655677899
Q ss_pred eEEEEecCC--CC-CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHH--cCCEEEEeccCcCCCcc
Q 043646 204 EVVEIGLDD--NG-LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ--YGGFACFDFAASGPYVK 278 (625)
Q Consensus 204 ~vv~v~~~~--~~-~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~--~g~~vivD~A~~~g~~~ 278 (625)
+++.++++. ++ .+|++++.+.+.. +++++|++++++||||.+.+.+++.++++. +++++|+|+++.--...
T Consensus 124 ~~~~v~~~~~~~~~~~d~~~l~~~~~~----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 124 PLVEVPLVDGADGFHADVPAIVAAALA----SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDV 199 (364)
T ss_pred EEEEEecCCCccCCCcCHHHHHHHHhc----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCC
Confidence 999999842 33 5788888665542 579999999999999999999988888875 48999999996521111
Q ss_pred ccCCC-CCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCC
Q 043646 279 INLRS-RNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT 356 (625)
Q Consensus 279 id~~~-~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt 356 (625)
..... .....--+++.|++|.||.|+ .+|+++.++++. +.+..... ..+.
T Consensus 200 ~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~--~~l~~~~~--------------------------~~~~ 251 (364)
T PRK04781 200 PSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELI--AVLRRCQA--------------------------PYPV 251 (364)
T ss_pred cchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHH--HHHHhccC--------------------------CCCC
Confidence 01000 000112366679999998554 489999988773 22211100 0111
Q ss_pred hhHHHHHHHHHHHHHHhhcC---HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCcccccc
Q 043646 357 PQIVQMIRAALAFWVKEYIG---YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE 433 (625)
Q Consensus 357 ~~~~~~~~aal~~~~~~~~g---~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~ 433 (625)
..+.+. ++..++ +... .....+..+..++.+.+.|+.++++..+.+. .+.+.|...+
T Consensus 252 ~~~~~~--~a~~~l--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~----~g~f~~~~~~------------ 311 (364)
T PRK04781 252 PTPCAA--LAEQAL--SAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPS----QGNFLLVRFD------------ 311 (364)
T ss_pred CHHHHH--HHHHHH--hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC----CCcEEEEEcC------------
Confidence 112221 222232 1111 2233334566678888889888776433342 2444444332
Q ss_pred CCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 043646 434 RNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFIL 513 (625)
Q Consensus 434 ~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll 513 (625)
+..++.+.|. ++||.+++|..+.+ .++++||+++ +++++++++
T Consensus 312 -----~~~~~~~~l~-~~gI~v~~~~~~~~----------------------------~~~~~Ris~~---~~~~~~~l~ 354 (364)
T PRK04781 312 -----DAEAAFQALL-AAGVVVRDQRAAPR----------------------------LSDALRITLG---TPEQNDRVL 354 (364)
T ss_pred -----CHHHHHHHHH-HCCeEEeeCCCCCC----------------------------CCCeEEEeCC---CHHHHHHHH
Confidence 1457777775 58999998764320 1479999998 799999999
Q ss_pred HHHHHHHH
Q 043646 514 AALEFIAA 521 (625)
Q Consensus 514 ~aL~~~~~ 521 (625)
++|+++.+
T Consensus 355 ~al~~~~~ 362 (364)
T PRK04781 355 AALQRTQA 362 (364)
T ss_pred HHHHHHHh
Confidence 99998654
No 183
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=8.5e-20 Score=192.25 Aligned_cols=202 Identities=13% Similarity=0.098 Sum_probs=149.1
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIK 154 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~ 154 (625)
...++|+.+... +.|+.+.+++.+.+... +.+ .|.. .-..++|+++++++|.+++ +|++| +|++++|.
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~Y~~-----~g~~~lr~~ia~~~~~~~~-~I~~t-~G~~~~l~ 86 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRV--PFN--RYPH-----ITSDPLREAIAEFYGLDAE-NIAVG-NGSDELIS 86 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcC--ccc--cCCC-----CCHHHHHHHHHHHhCcCcc-eEEEc-CCHHHHHH
Confidence 357899988866 56688888888766321 001 1110 1245688999999998776 89998 89999998
Q ss_pred HHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCC
Q 043646 155 RLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRP 234 (625)
Q Consensus 155 ~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~ 234 (625)
.++..+ +||+ |+++.+.|+.+...++..|++++.++++.++.+|++.+++++ +++
T Consensus 87 ~~~~~~-----------------~gd~--V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~------~~~ 141 (337)
T PRK03967 87 YLVKLF-----------------EGKH--IVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA------KNA 141 (337)
T ss_pred HHHHHh-----------------CCCe--EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc------cCC
Confidence 876643 5675 888989998776667788999999999877789999998754 367
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCC-CCCCCCcEEEEcCCCCCCCCC-CceEEEEe
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRS-RNIDGYDAIFLATHKFLGGPG-TPGILLIS 312 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~-~~~~~~D~v~~S~hK~lggp~-g~G~l~v~ 312 (625)
+++++++|+||||.+.+.++|.++++ +++++|+|++++.-. ...... .....--+++.|++|.|+.|+ .+|+++++
T Consensus 142 ~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~-~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~ 219 (337)
T PRK03967 142 SAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFS-GKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN 219 (337)
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhc-ccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC
Confidence 89999999999999999999999995 799999999975211 101000 000011356679999998564 48999998
Q ss_pred ccc
Q 043646 313 KAL 315 (625)
Q Consensus 313 ~~~ 315 (625)
+++
T Consensus 220 ~~~ 222 (337)
T PRK03967 220 EEI 222 (337)
T ss_pred HHH
Confidence 776
No 184
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=2.4e-19 Score=194.93 Aligned_cols=359 Identities=14% Similarity=0.102 Sum_probs=224.8
Q ss_pred CCceEeccCCCCCcchHHHHHHHHHhhCCC------CCCCCC-CcchhhHHHHHHHHHHHHHHHHHhC----CCCCCcEE
Q 043646 75 KRRLTYADHTASGRSLRYIEDYIINNVLPF------YGNTHT-SDSYVGQRMTKMVHEASNYIKRCLG----GGQADAII 143 (625)
Q Consensus 75 ~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~------~~n~~~-~~~~~~~~~~~~~~~~~~~ia~~~g----~~~~~~vi 143 (625)
+.+++-|..+-...+.+.+.+.+.+..... ...++. ..|....+...+.+++.+.+.+.+| .+++ +|+
T Consensus 46 p~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~-~Iv 124 (447)
T PLN02607 46 PSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD-RIV 124 (447)
T ss_pred CCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH-HeE
Confidence 345788888888888888888887654210 001111 0111112334455555555555544 3444 899
Q ss_pred EeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH-HcCCeEEEEecCCC--CCCCHHH
Q 043646 144 FCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR-QSLAEVVEIGLDDN--GLLDIEA 220 (625)
Q Consensus 144 ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~~--~~ld~~~ 220 (625)
+| +|+++++..++.++ .+|||. |+++.+.|+.+...++ ..|++++.|+.+.. ..+|+++
T Consensus 125 it-~G~t~al~~l~~~l---------------~~pGD~--Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~ 186 (447)
T PLN02607 125 LT-AGATAANELLTFIL---------------ADPGDA--LLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQA 186 (447)
T ss_pred Ec-CChHHHHHHHHHHh---------------CCCCCE--EEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHH
Confidence 98 89999999998877 478986 9999999998876676 46999999998742 4689999
Q ss_pred HHHHHHHhhh-CCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc----cccCCC----CC-C-
Q 043646 221 LRSQLELYKA-AKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV----KINLRS----RN-I- 286 (625)
Q Consensus 221 L~~~l~~~~~-~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~----~id~~~----~~-~- 286 (625)
+++++++... +.+++++++++|+||||.+.+ +++|.++|++||+++|+|++++.... ...+.. .. .
T Consensus 187 le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~ 266 (447)
T PLN02607 187 LEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKG 266 (447)
T ss_pred HHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCC
Confidence 9999874222 247899999999999999988 67788899999999999999764211 111110 00 0
Q ss_pred -CCCcEEEEcCCCCCCCCC-CceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH
Q 043646 287 -DGYDAIFLATHKFLGGPG-TPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI 363 (625)
Q Consensus 287 -~~~D~v~~S~hK~lggp~-g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 363 (625)
..--.++.|++|.||.|+ .+|+++..+ .+. ..+... ..+ .+.+.+.+.
T Consensus 267 ~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~--~~~~~~-------------------------~~~-~~~s~~~q~- 317 (447)
T PLN02607 267 VAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV--TTARRM-------------------------SSF-TLVSSQTQH- 317 (447)
T ss_pred CcCcEEEEEcchhcCCCCcceEEEEEEcCHHHH--HHHHHH-------------------------hhc-CCCCHHHHH-
Confidence 011256679999998665 489999843 331 111000 000 011222222
Q ss_pred HHHHHHHHHhhcC----HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 364 RAALAFWVKEYIG----YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 364 ~aal~~~~~~~~g----~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
++..++.+..- .+..+++..+..+.+.+.|++. ++.+..+ .++.+.|.-.+.... ....-.
T Consensus 318 --~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~----~ag~fvw~~L~~~~~--------~~~~~~ 382 (447)
T PLN02607 318 --LLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKG----NAGLFCWMNLSPLLE--------TPTREG 382 (447)
T ss_pred --HHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccC----CeeEEEEEEchHhhc--------CCCchh
Confidence 11222212111 2234455555666777788775 6665443 346666665542100 000011
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..++.+.|.+++||.+.+|..|... .+||+||+|+. .++++++..++.|..+
T Consensus 383 e~~l~~~ll~~~gV~v~pG~~f~~~---------------------------~~g~fRi~fa~-~~~~~l~~gl~Ri~~~ 434 (447)
T PLN02607 383 ELALWDSILREVKLNISPGSSCHCS---------------------------EPGWFRVCFAN-MSEDTLEVALKRIHRF 434 (447)
T ss_pred HHHHHHHHHHhCCEEEcCccccCCC---------------------------CCCEEEEEecc-CCHHHHHHHHHHHHHH
Confidence 2356766767789999999877421 36999999984 4689999999999988
Q ss_pred HHhhh
Q 043646 520 AAYGH 524 (625)
Q Consensus 520 ~~~~~ 524 (625)
+....
T Consensus 435 l~~~~ 439 (447)
T PLN02607 435 MDRRK 439 (447)
T ss_pred HHHHH
Confidence 86543
No 185
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.87 E-value=4.3e-20 Score=197.70 Aligned_cols=162 Identities=22% Similarity=0.243 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH
Q 043646 119 MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW 198 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (625)
.....+++++.+++++|++ .++++++|+ +++..++.++ +++||+ |+++...|.+....+
T Consensus 59 ~~p~~~~le~~la~l~g~~---~~v~~ssG~-~Ai~~al~al---------------~~~Gd~--Vi~~~~~y~~t~~~~ 117 (390)
T PRK08133 59 TNPTVTMFQERLAALEGAE---ACVATASGM-AAILAVVMAL---------------LQAGDH--VVSSRSLFGSTVSLF 117 (390)
T ss_pred CChHHHHHHHHHHHHhCCC---cEEEECCHH-HHHHHHHHHH---------------hCCCCE--EEEccCcchhHHHHH
Confidence 3455788999999999975 356664554 5566655555 478885 899988888766543
Q ss_pred ----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 199 ----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 199 ----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
...|++++.++++ |+++++++++ ++|++|++++++||||.+.|+++|+++||++|+++++|++++.
T Consensus 118 ~~~~~~~G~~v~~vd~~-----d~~~l~~~i~-----~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~ 187 (390)
T PRK08133 118 EKIFARFGIETTFVDLT-----DLDAWRAAVR-----PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCT 187 (390)
T ss_pred HHHHHHcCcEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcc
Confidence 4579999999874 7899999887 6899999999999999999999999999999999999999876
Q ss_pred CCccccCCCCCCCCCcEEEEcCCCCCCCCCC-c-eEEEEeccc
Q 043646 275 PYVKINLRSRNIDGYDAIFLATHKFLGGPGT-P-GILLISKAL 315 (625)
Q Consensus 275 g~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~-G~l~v~~~~ 315 (625)
+.....+ .. ++|+++.|++|++++++. + |+++.+++.
T Consensus 188 ~~~~~pl-~~---g~Divv~S~sK~~~g~g~~~GG~vv~~~~~ 226 (390)
T PRK08133 188 PALQQPL-KL---GADVVIHSATKYLDGQGRVLGGAVVGSKEL 226 (390)
T ss_pred cccCCch-hh---CCcEEEeecceeecCCcceEeEEEEcCHHH
Confidence 6543332 22 789999999999987653 3 666666654
No 186
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=1.7e-19 Score=197.52 Aligned_cols=358 Identities=13% Similarity=0.118 Sum_probs=220.6
Q ss_pred CceEeccCCCCCcchHHHHHHHHHhhCCC-CCCC------CCCcchhhHHHHHHHHHHHHHHHHHhC----CCCCCcEEE
Q 043646 76 RRLTYADHTASGRSLRYIEDYIINNVLPF-YGNT------HTSDSYVGQRMTKMVHEASNYIKRCLG----GGQADAIIF 144 (625)
Q Consensus 76 ~~~~Yld~~~~~~~p~~v~ea~~~~l~~~-~~n~------~~~~~~~~~~~~~~~~~~~~~ia~~~g----~~~~~~vif 144 (625)
...+.|+.+....+++.+.+.+....... ..+. ....|....+..++.+.+.+++.+.+| ++++ +|++
T Consensus 38 ~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~-~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN-KLVL 116 (468)
T ss_pred CeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH-HeEE
Confidence 46788888887777755555554321100 0000 000111112233455555555555444 3454 7888
Q ss_pred eCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH-HcCCeEEEEecCC--CCCCCHHHH
Q 043646 145 CGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR-QSLAEVVEIGLDD--NGLLDIEAL 221 (625)
Q Consensus 145 t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~~--~~~ld~~~L 221 (625)
| +|++++|..++.++ ++|||. |+++.+.|+.+...+. ..|++++.|+++. +..+|+++|
T Consensus 117 t-~Ga~~al~~l~~~l---------------~~pGd~--Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~l 178 (468)
T PLN02450 117 T-AGATSANETLMFCL---------------AEPGDA--FLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESAL 178 (468)
T ss_pred c-cChHHHHHHHHHHh---------------CCCCCE--EEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHH
Confidence 8 89999999998887 578986 9999999998877777 4799999999863 446788999
Q ss_pred HHHHHHhh-hCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCC-Cc---c---ccC-CC-----C
Q 043646 222 RSQLELYK-AAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YV---K---INL-RS-----R 284 (625)
Q Consensus 222 ~~~l~~~~-~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g-~~---~---id~-~~-----~ 284 (625)
++++.+.. ...+++++++++|+||||.+.+ +++|.++|++||+++|+|++++.- +. . +.+ .. .
T Consensus 179 e~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~ 258 (468)
T PLN02450 179 EEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENT 258 (468)
T ss_pred HHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccC
Confidence 99886421 1237899999999999999987 456788899999999999997631 11 1 111 00 0
Q ss_pred CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH
Q 043646 285 NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI 363 (625)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 363 (625)
....--+++.|++|.|+.|+ .+|+++.+++.. ...+.. ...+ ...+.+.+.
T Consensus 259 ~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l-~~~~~~-------------------------~~~~-~~~s~~~Q~- 310 (468)
T PLN02450 259 DVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMV-VSAATK-------------------------MSSF-GLVSSQTQY- 310 (468)
T ss_pred CCCCcEEEEEeccccCCCCCccEEEEEECCHHH-HHHHHH-------------------------Hhhc-CCCCHHHHH-
Confidence 00122366779999997554 489999876541 111100 0000 112222222
Q ss_pred HHHHHHHHHhhc----CHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 364 RAALAFWVKEYI----GYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 364 ~aal~~~~~~~~----g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
++..++.+.. -.+..+++.++.++.+.+.|.++ ++.+..+ .++.+.|...+.... ......
T Consensus 311 --a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~----~~g~flwi~l~~~~~--------~~~~~~ 375 (468)
T PLN02450 311 --LLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLKS----NAGLFCWVDMRHLLK--------SNTFEA 375 (468)
T ss_pred --HHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC----CceEEEEEEchHhcC--------cCCchH
Confidence 2222221211 13344566666677888888876 6666544 345555554432100 000011
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..++.+.|.+++||.+.+|..|..+ .+||+||+++. .++++++..++.|+++
T Consensus 376 ~~~l~~~ll~~~gV~v~PG~~f~~~---------------------------~~g~~Rl~f~~-~~~~~l~~~l~ri~~~ 427 (468)
T PLN02450 376 EMELWKKIVYEVKLNISPGSSCHCT---------------------------EPGWFRVCFAN-MSEETLDLAMKRLKSF 427 (468)
T ss_pred HHHHHHHHHHhCCEEEeCccccCCC---------------------------CCCEEEEEecC-CCHHHHHHHHHHHHHH
Confidence 2346666667789999999877521 25899999985 4679999999999988
Q ss_pred HHhh
Q 043646 520 AAYG 523 (625)
Q Consensus 520 ~~~~ 523 (625)
+...
T Consensus 428 l~~~ 431 (468)
T PLN02450 428 VESD 431 (468)
T ss_pred HHhc
Confidence 7553
No 187
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=4.4e-20 Score=197.61 Aligned_cols=306 Identities=14% Similarity=0.115 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH--
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-- 198 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (625)
...+++++.+++++|.+. .+++++|+. ++..++.++ +++||+ |+++...|.+....+
T Consensus 59 p~~~~le~~lA~l~g~~~---av~~~sG~~-Ai~~~l~al---------------~~~Gd~--Vi~~~~~y~~t~~~~~~ 117 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEA---AVATSSGMG-AIAATLLTI---------------LKAGDH--LISDECLYGCTFALLEH 117 (391)
T ss_pred chHHHHHHHHHHHhCCCc---EEEECCHHH-HHHHHHHHH---------------hCCCCE--EEEecCcchHHHHHHHH
Confidence 446779999999999863 345547765 566666555 478885 888888877654433
Q ss_pred --HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 199 --RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 199 --~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
...|++++.++++ |+++++++++ +++++|++++++||+|.+.|+++|+++||++|+++++|++++.+.
T Consensus 118 ~~~~~G~~~~~vd~~-----d~e~l~~~i~-----~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~ 187 (391)
T TIGR01328 118 ALTKFGIQVDFINMA-----IPEEVKAHIK-----DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPM 187 (391)
T ss_pred HHhcCCeEEEEECCC-----CHHHHHHhhc-----cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhc
Confidence 3468999988875 7899999887 579999999999999999999999999999999999999998775
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
....+. . ++|++++|++|++++++. .|+++.++++. ..+... ..+...
T Consensus 188 ~~~~~~-~---g~Divv~S~sK~lgg~g~~~gG~v~~~~~li--~~l~~~------------------------~~~~~~ 237 (391)
T TIGR01328 188 LTNPVA-L---GVDVVVHSATKYIGGHGDVVAGLICGKAELL--QQIRMV------------------------GIKDMT 237 (391)
T ss_pred cCCchh-c---CCCEEEccccccccCCCCceEEEEEcCHHHH--HHHHHH------------------------HHHhCC
Confidence 533332 2 789999999999998875 47777777652 111100 000011
Q ss_pred C-Ch-hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEE
Q 043646 355 G-TP-QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFL 418 (625)
Q Consensus 355 g-t~-~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~ 418 (625)
| .. ++.+. +... .......+.++.++++.++.++|.+.|+++ ++.|.- ..-+++++|.
T Consensus 238 g~~l~~~~a~----l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~ 311 (391)
T TIGR01328 238 GSVISPFDAW----LILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFE 311 (391)
T ss_pred CCCCCcHHHH----HHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEE
Confidence 2 11 11111 1111 112234455667778999999999988874 433310 1236788888
Q ss_pred eccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcE
Q 043646 419 VYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGW 495 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~ 495 (625)
+..+. -....+.+.| +.+.+.+.-|...+- |.......+..+... ..|+.++.
T Consensus 312 ~~~~~--------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi~~~l 367 (391)
T TIGR01328 312 LKGGF--------------AGAKKLLNNL-KLIRLAVSLGDAETLIQHPASMTHAVVPKEERE---------AAGITDGM 367 (391)
T ss_pred eCCCH--------------HHHHHHHHhC-CcceEecCCCCCcccCcCCCccccccCCHHHHH---------hcCCCCCe
Confidence 74211 0122344444 333333433332210 111111122211111 25677899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 496 TRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 496 iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
||||+|. ||.+.|++-|++.+.
T Consensus 368 iR~svGl----E~~~dl~~dl~~al~ 389 (391)
T TIGR01328 368 IRLSVGL----EDADDLIADLKQALD 389 (391)
T ss_pred EEEEeCc----CCHHHHHHHHHHHHh
Confidence 9999996 566667776666554
No 188
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=5.8e-20 Score=197.15 Aligned_cols=307 Identities=15% Similarity=0.128 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH--
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-- 198 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (625)
...+++++.|+++.|.. + .+++ ++|+ ++|..++.++ +++||+ |+++.+.|......+
T Consensus 60 p~~~~Le~~lA~l~g~~-~-~v~~-~sG~-~Ai~~~l~al---------------l~pGD~--Vvv~~p~Y~~t~~~~~~ 118 (405)
T PRK08776 60 PTRDLLGEALAELEGGA-G-GVIT-ATGM-GAINLVLNAL---------------LQPGDT--LVVPHDAYGGSWRLFNA 118 (405)
T ss_pred hHHHHHHHHHHHHhCCC-c-eEEE-cCHH-HHHHHHHHHH---------------hCCCCE--EEEccCCchHHHHHHHH
Confidence 34567889999999974 3 4555 4774 7788888776 578986 888888887744333
Q ss_pred --HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 199 --RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 199 --~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
...|.+++.++. .|+++|+++++ +++++|++++++||||.+.|+++|+++|+++|+++++|++++.+.
T Consensus 119 ~~~~~g~~v~~v~~-----~d~~~l~~~i~-----~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 119 LAKKGHFALITADL-----TDPRSLADALA-----QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred HHHhcCcEEEEECC-----CCHHHHHHhcC-----cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 334778887765 37899999887 579999999999999999999999999999999999999988765
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
....+ .+ ++|++++|+||+++|+++ .|+++.+++.. .+.+.. .+...
T Consensus 189 ~~~pl-~~---gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l-~~~l~~--------------------------~~~~~ 237 (405)
T PRK08776 189 LQKPL-EF---GADLVLHSTTKYINGHSDVVGGAVVARDAEL-HQQLVW--------------------------WANAL 237 (405)
T ss_pred cCCcc-cc---cCCEEEecCceeecCCCCceEEEEEeCCHHH-HHHHHH--------------------------HHHhc
Confidence 43223 23 789999999999998875 47776654321 111100 00011
Q ss_pred C-ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEEe
Q 043646 355 G-TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFLV 419 (625)
Q Consensus 355 g-t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~~ 419 (625)
| .++..... +.. ......+.+.++..+++..+.+.|++.|.+. |+.|.- ...+++++|.+
T Consensus 238 g~~~s~~~a~---l~~--~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~ 312 (405)
T PRK08776 238 GLTGSPFDAF---LTL--RGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFEL 312 (405)
T ss_pred CCCCCHHHHH---HHH--hhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEE
Confidence 1 12222211 100 0112245566677778999999999988874 444321 12466888887
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
..+. -....+.+.| +.+.+.+.-|...+. |....+..+.++.-. ..|+.++.|
T Consensus 313 ~~~~--------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~---------~~gi~~~li 368 (405)
T PRK08776 313 EGGE--------------AAVRAFVDGL-RYFTLAESLGGVESLIAHPASMTHAAMTAEARA---------AAGISDGLL 368 (405)
T ss_pred cCCH--------------HHHHHHHHhC-CcceEccCCCCCceEEECCcccccccCCHHHHH---------hcCCCCCeE
Confidence 4211 0022445555 334444444432221 111111122221111 256778999
Q ss_pred EEecCCCCCHHHHHHHHHHHHH
Q 043646 497 RITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~ 518 (625)
|||+|.-..++=++.+-++|+.
T Consensus 369 R~svGlE~~~dli~dl~~al~~ 390 (405)
T PRK08776 369 RLSVGIESAEDLLIDLRAGLAR 390 (405)
T ss_pred EEEeCcCCHHHHHHHHHHHHHH
Confidence 9999975444334444444443
No 189
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=2.1e-19 Score=190.90 Aligned_cols=319 Identities=13% Similarity=0.042 Sum_probs=203.2
Q ss_pred ceEeccCCCC-CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 77 RLTYADHTAS-GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 77 ~~~Yld~~~~-~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
..+.|+.+.. ..+|+.+.+++.+.+......|.. -..++|+.++++++.+++ +|++| +|++++|..
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----------~~~~lr~~ia~~~~~~~~-~I~it-~G~~~al~~ 97 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKA-----------SHADLTAALADRWDVSPE-QVWLA-NGGDGALDY 97 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCC-----------CHHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHHH
Confidence 3556655433 234567778877665322111211 134688899999999877 89988 899999999
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCC
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKR 233 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~ 233 (625)
++.++ +++||+ |+++.+.|+.+....+..|++++.++++. +..++++++.+... +
T Consensus 98 ~~~~~---------------~~~gd~--V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~------~ 154 (357)
T PRK14809 98 LARAM---------------LDPGDT--VLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD------G 154 (357)
T ss_pred HHHHh---------------cCCCCE--EEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc------C
Confidence 98877 578986 89888888777666777899999999864 34567777665542 5
Q ss_pred CeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcCCCcccc-CCCCCCCCCcEEEEcCCCCCCCCC-CceEE
Q 043646 234 PMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGPYVKIN-LRSRNIDGYDAIFLATHKFLGGPG-TPGIL 309 (625)
Q Consensus 234 ~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~g~~~id-~~~~~~~~~D~v~~S~hK~lggp~-g~G~l 309 (625)
++++++++++||||.+.+.+++.++++.. ++++++|+++..-..... ........--+++.|++|.||.|+ .+|++
T Consensus 155 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 234 (357)
T PRK14809 155 ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYA 234 (357)
T ss_pred CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheee
Confidence 79999999999999999988887777653 789999999653211101 000100112356679999998554 48999
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIE 389 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~ 389 (625)
+.++++. +.+.... ...+.+.+.+ .+++..+ .+..-.+...+..+..++
T Consensus 235 ~~~~~~~--~~~~~~~--------------------------~~~~~~~~~~--~~a~~~l-~~~~~~~~~~~~~~~~r~ 283 (357)
T PRK14809 235 VVPEEWA--DAYARVN--------------------------TPFAASELAC--RAGLAAL-DDDEHVERTVETARWARE 283 (357)
T ss_pred ecCHHHH--HHHHHhC--------------------------CCCCCCHHHH--HHHHHHh-CCHHHHHHHHHHHHHHHH
Confidence 9988762 2221100 0011112211 2222322 111113344445555566
Q ss_pred HHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhh
Q 043646 390 SALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTL 469 (625)
Q Consensus 390 ~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~ 469 (625)
++.+.|... .+ + ..+.+.+...+ +..++++.| .++||.+++|..|+
T Consensus 284 ~l~~~L~~~----~~-~----~~g~f~~~~~~-----------------~~~~~~~~l-~~~gv~v~~g~~f~------- 329 (357)
T PRK14809 284 YIREELDAP----TW-E----SAGNFVLAEVG-----------------DASAVAEAA-QERGVIVRDCTSFG------- 329 (357)
T ss_pred HHHHHhcCc----cC-C----CCCCEEEEECC-----------------CHHHHHHHH-HHCCEEEEECccCC-------
Confidence 677777542 11 2 12334343322 145788887 45799999987664
Q ss_pred hcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 470 LAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 470 l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.++++||+++ +.++++.++++|+.+++
T Consensus 330 ----------------------~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 330 ----------------------LPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ----------------------CCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 1378999986 57999999999988753
No 190
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.86 E-value=4.1e-20 Score=186.75 Aligned_cols=360 Identities=15% Similarity=0.154 Sum_probs=237.6
Q ss_pred ccccccccCCCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCc
Q 043646 34 QTCSEFKNDHHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSD 112 (625)
Q Consensus 34 ~~~~~~~~~~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~ 112 (625)
+.++..+++.+++.. .+++..++..|.-+.- .+.-.+| -|+|.-+++.-+-...... .....|++...
T Consensus 64 P~~L~~l~nlel~~~~esl~qil~~cr~tl~y-~vKTgHp------rffNQl~~glD~~~Lag~w----lT~t~Ntn~~T 132 (510)
T KOG0629|consen 64 PDELKELFNLELRDQPESLAQILEDCRDTLKY-SVKTGHP------RFFNQLSSGLDPIGLAGEW----LTSTANTNMFT 132 (510)
T ss_pred hHHHHHHhCcccCCChhhHHHHHHHHHHHHHh-hhccCCC------cchhhhccCCCHHHHHHHH----HHhccCCCCce
Confidence 455666777777777 6667777777765532 1222222 2555555555443332222 22336777777
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCc
Q 043646 113 SYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH 192 (625)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~ 192 (625)
|...+.+.-+..++-..+.+..|.+....-+|+.+|+.++++.+..+.--..|...... ...+++ -+++++..+|+
T Consensus 133 YEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~G-m~~~p~---lilFtSeesHY 208 (510)
T KOG0629|consen 133 YEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKG-MFALPP---LILFTSEESHY 208 (510)
T ss_pred EEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhh-hhcCCc---EEEEecccchh
Confidence 77888888888899999999999987434688888999999998877633333211111 112332 36788899999
Q ss_pred hhHHHHHHcC---CeEEEEecCCCCCCCHHHHHHHHHHhhhCC-CCeEEEEecccCccccccCHHHHHHHHHHcCCEEEE
Q 043646 193 SNLLSWRQSL---AEVVEIGLDDNGLLDIEALRSQLELYKAAK-RPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (625)
Q Consensus 193 s~~~~~~~~G---~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~-~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~viv 268 (625)
|+.++.+..| -+++.|+.++.|.+++++||+.|.+....+ -|.+|..++.+++-|+++|++.|+++|++|+.|+||
T Consensus 209 Si~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 209 SIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHV 288 (510)
T ss_pred hHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEe
Confidence 9999988887 489999999999999999999997643322 479999999999999999999999999999999999
Q ss_pred eccCcCCCccccCCCC---CCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccc
Q 043646 269 DFAASGPYVKINLRSR---NIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYL 345 (625)
Q Consensus 269 D~A~~~g~~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (625)
|+|.+.|..--..+.. +.+.+|+++.++||++|+|.-|+.++.+.+.. +..... ....|. |. .+..|
T Consensus 289 DAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gl-l~~Cn~-----~~A~YL--Fq-~dK~Y- 358 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGL-LQRCNQ-----MSAIYL--FQ-QDKFY- 358 (510)
T ss_pred ecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHH-HHhhcc-----cchhhh--hc-cCcee-
Confidence 9998876542211111 33578999999999999999899888876652 111100 000000 00 00111
Q ss_pred cchhhhhcCCChhH-HHHHHHHHHHH----HHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEec
Q 043646 346 EDIEERENGGTPQI-VQMIRAALAFW----VKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVY 420 (625)
Q Consensus 346 ~~~~~~~~~gt~~~-~~~~~aal~~~----~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~ 420 (625)
...++.|.-.+ ++--.-.+.+| .+...|.+...++..++++|+.++|++-++.+.+-.. ++..-+++|...
T Consensus 359 ---dvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~-~pe~~nv~fw~v 434 (510)
T KOG0629|consen 359 ---DVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFEL-EPEHVNVCFWYV 434 (510)
T ss_pred ---ecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcC-CCceEEEeeccC
Confidence 01111221111 00001123344 3456788999999999999999999998887655432 234567788776
Q ss_pred cC
Q 043646 421 ST 422 (625)
Q Consensus 421 ~~ 422 (625)
|.
T Consensus 435 p~ 436 (510)
T KOG0629|consen 435 PP 436 (510)
T ss_pred ch
Confidence 64
No 191
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=5e-20 Score=197.35 Aligned_cols=310 Identities=17% Similarity=0.109 Sum_probs=193.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+++++.++++.|++. .++|+ +|+ +++..++.++ +++||+ |+++...|.+.
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~~--~i~~s-sG~-~Ai~~~l~al---------------l~~GD~--Vi~~~~~y~~~ 116 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAEA--ATAFS-TGM-AAISNTLYTF---------------LKPGDR--VVSIKDTYGGT 116 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCCe--EEEeC-ChH-HHHHHHHHHh---------------cCCCCE--EEEcCCchHHH
Confidence 444455667889999999999742 45554 675 5576666655 578885 99999999886
Q ss_pred HHHH----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
...+ +..|++++.++. .|+++++++|+ ++|++|++++++||||.+.|+++|+++||++|+++++|+
T Consensus 117 ~~~~~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~-----~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~ 186 (398)
T PRK08249 117 NKIFTEFLPRMGVDVTLCET-----GDHEQIEAEIA-----KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDN 186 (398)
T ss_pred HHHHHHHHhhCCeEEEEcCC-----CCHHHHHHhcC-----CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEEC
Confidence 5444 346888887763 48999999997 589999999999999999999999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccch
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDI 348 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (625)
+++.++....+ .+ ++|+++.|++|+++|++. .|+++.++++. +.+...
T Consensus 187 t~a~~~~~~~l-~~---~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~--~~l~~~------------------------ 236 (398)
T PRK08249 187 TFATPINQNPL-AL---GADLVIHSATKFLSGHADALGGVVCGSKELM--EQVYHY------------------------ 236 (398)
T ss_pred CcCccccCCch-hh---CCCEEeccCceecCCCCCceEEEEECCHHHH--HHHHHH------------------------
Confidence 98866543222 22 789999999999987653 36666655552 111100
Q ss_pred hhhhcCCCh-hHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCc
Q 043646 349 EERENGGTP-QIVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQ 412 (625)
Q Consensus 349 ~~~~~~gt~-~~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~ 412 (625)
.....++. ++.+. +..++ ...+...++..+++..+.++|++.|.++ |+.|.- ...+
T Consensus 237 -~~~~g~~~s~~~a~l~l~~l-------~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g 308 (398)
T PRK08249 237 -REINGATMDPMSAYLILRGM-------KTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFG 308 (398)
T ss_pred -HHhcCCCCCHHHHHHHHhCc-------chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCC
Confidence 00111121 22221 11111 1233444566677888999999888775 444321 1246
Q ss_pred ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCC
Q 043646 413 AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYL 489 (625)
Q Consensus 413 ~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~ 489 (625)
++++|.+..+. -....+.+.| +.+.+.+.-|...+. |.......+..+... ..
T Consensus 309 ~~~sf~~~~~~--------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~ 364 (398)
T PRK08249 309 GILSFVLKGGM--------------DTVKRLLPKL-RYAHRAANLGAVETIYGPARTTSHVENTLEERA---------AL 364 (398)
T ss_pred ceEEEEEcCCH--------------HHHHHHHHhC-CcceEccCCCCCCceeeCCcccccccCCHHHHH---------hc
Confidence 78888874211 0123445555 334444443332210 111111122221111 25
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 490 GVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 490 g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
|+.++.||||+|.-..++=++.|.++|+
T Consensus 365 gi~~~liR~svGlE~~~dl~~dl~~al~ 392 (398)
T PRK08249 365 GIPEGLVRISVGIEDTEDLIADLEQAFA 392 (398)
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 6778999999997444433444444443
No 192
>PRK06855 aminotransferase; Validated
Probab=99.86 E-value=2.5e-19 Score=194.89 Aligned_cols=347 Identities=16% Similarity=0.074 Sum_probs=212.0
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
.++|+.+.+++.+.+.. +....|....+..++.+.+.+++++..|. +++ +|++| +|++++|..++. +
T Consensus 47 ~~~p~~~~~a~~~~~~~----~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~-~I~it-~G~~~al~~~~~-l---- 115 (433)
T PRK06855 47 EKIPDWMKEIVAELVMD----DKSYGYCPTKGVLETREFLAELNNKRGGAQITPD-DIIFF-NGLGDAIAKIYG-L---- 115 (433)
T ss_pred CCCCHHHHHHHHHHhhc----CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHh-HEEEc-CcHHHHHHHHHH-h----
Confidence 36677788887765532 11111222233455556666666665454 444 89998 899999988865 3
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchhHHHH-HHcCCeEEEEecCC-C-CCCCHHHHHHHHHHhhhCCCCeEEEEec
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-RQSLAEVVEIGLDD-N-GLLDIEALRSQLELYKAAKRPMLGSFSA 241 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-~~~G~~vv~v~~~~-~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~ 241 (625)
+.+||+ |++..+.|+.+.... ...|++++.+++++ + ..+|+++|++++.+. ++++++++++
T Consensus 116 -----------~~~Gd~--Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---~~~~~i~l~~ 179 (433)
T PRK06855 116 -----------LRREAR--VIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN---PSIAGILLIN 179 (433)
T ss_pred -----------cCCCCe--EEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC---CCceEEEEEC
Confidence 468886 888888888765332 34588889999874 3 468999999998631 3678999999
Q ss_pred ccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEec
Q 043646 242 CSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISK 313 (625)
Q Consensus 242 ~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~ 313 (625)
|+||||.+.+ +++|+++|++||+++|+|++++--. ....+.....+...+++.|++|.|+.|+ .+|++++..
T Consensus 180 P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~ 259 (433)
T PRK06855 180 PDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYN 259 (433)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeC
Confidence 9999999988 4667888999999999999965221 1111111111122377789999997565 489999842
Q ss_pred cc-----cc-cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh---cCHHHHHHHH
Q 043646 314 AL-----YQ-LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY---IGYEVIKKQE 384 (625)
Q Consensus 314 ~~-----~~-l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~---~g~~~i~~~~ 384 (625)
.. .. +..+.. ......+.+.+.+. ++..++ .+. .-.+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~Q~--a~~~~l-~~~~~~~~~~~~~~~~ 311 (433)
T PRK06855 260 ADKDEVFKKYINSILN-------------------------AKMIEVCSTTLPQM--AIPRIM-SHPEYKNYLKERNKRY 311 (433)
T ss_pred CchhhHHHHHHHHHHH-------------------------hhccccCCChHHHH--HHHHhh-cCCcHHHHHHHHHHHH
Confidence 11 00 000000 00011122233222 222222 111 1133455566
Q ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCC--CCCccccc------------cCCCCCChHHHHHHhhhh
Q 043646 385 DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN--SSPENMKI------------ERNKPLHGPFVATLFNDL 450 (625)
Q Consensus 385 ~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~--~~~~~~~~------------~~~~~l~~~~v~~~L~~~ 450 (625)
++.++.+.+.|.+++++.+..+ .++.+.|...++.. +.. .... .++...+..+++..|.++
T Consensus 312 ~~r~~~~~~~L~~~~~~~~~~p----~gg~~~w~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (433)
T PRK06855 312 EKRSNIAYEKLKDVPGLKVNRT----NGAFYMTVVFEDGVLNNKQ-SLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLAS 386 (433)
T ss_pred HHHHHHHHHHHhcCCCeeccCC----CeeEEEeeccccccccccc-cCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 6677888888988777776554 34666666554310 000 0000 000001244566666677
Q ss_pred cCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 451 FGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 451 ~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.||.+.+|..|+.. ...+|||+.. .+.++++..++.|.+++.+
T Consensus 387 ~gV~v~PG~~F~~~----------------------------~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 387 TGICVVPLSSFCTE----------------------------LNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred cCEEEecCCcCCCC----------------------------CCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 89999999877511 2349999975 4789999999999988865
No 193
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.86 E-value=2.8e-19 Score=188.19 Aligned_cols=325 Identities=14% Similarity=0.085 Sum_probs=201.8
Q ss_pred hHHHHHHHHHhhcCCCccccCCCCCCc-eEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHH
Q 043646 51 SEEKLAWLRSQIIGNDVEFDYSFGKRR-LTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNY 129 (625)
Q Consensus 51 ~~~~~~~lr~~~~~~~~~~~~p~g~~~-~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 129 (625)
.+.-|+.+|+..-.. |++. .=||..+.... +.++..+.+..+ + +..++.+++++.
T Consensus 7 ~~~~~~~~~~~~~~~--------~~~~~~~ylgl~~~~~----~~~~~~~~~~~~-~-----------g~~~~~~~Le~~ 62 (346)
T TIGR03576 7 REKALEIIREKISRG--------GRDSLYDLTGLAGGFK----IDEEDLELLETY-V-----------GPAIFEEKVQEL 62 (346)
T ss_pred HHHHHHHHHHHHhcc--------CCccccccccCCCChh----HHHHHHHHHHHh-c-----------CCHHHHHHHHHH
Confidence 467788888877433 2111 23666554444 444444444332 1 134778899999
Q ss_pred HHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc---CCCCchhHHHHHHcCCeEE
Q 043646 130 IKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG---PYEHHSNLLSWRQSLAEVV 206 (625)
Q Consensus 130 ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~---~~~h~s~~~~~~~~G~~vv 206 (625)
+++++|.+++ +++++ +|+++++..++.++ +++||. |+++ .+.|.++...++..|++++
T Consensus 63 lA~~~g~~~e-~ilv~-~gg~~a~~~~~~al---------------~~~gd~--Vli~~~d~p~~~s~~~~~~l~ga~~~ 123 (346)
T TIGR03576 63 GREHLGGPEE-KILVF-NRTSSAILATILAL---------------EPPGRK--VVHYLPEKPAHPSIPRSCKLAGAEYF 123 (346)
T ss_pred HHHHcCCCcc-eEEEE-CCHHHHHHHHHHHh---------------CCCCCE--EEECCCCCCCchhHHHHHHHcCCEEe
Confidence 9999999776 67777 67777788887777 578885 6653 4699999888998998864
Q ss_pred EEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc---cCHHHHHHHHHHcCCEEEEeccCcCCCccc-cCC
Q 043646 207 EIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASGPYVKI-NLR 282 (625)
Q Consensus 207 ~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~---~~l~~I~~la~~~g~~vivD~A~~~g~~~i-d~~ 282 (625)
.+ .++++++. . +++++|+++. ++++|.+ .|+++|+++|+++|+++++|+||+.+.... +..
T Consensus 124 ~~-------~~l~~l~~--~-----~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~ 188 (346)
T TIGR03576 124 ES-------DELSELKK--I-----DGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP 188 (346)
T ss_pred cc-------CCHHHHhh--C-----cCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCC
Confidence 32 14554321 1 4678888865 6899998 689999999999999999999998765321 111
Q ss_pred CCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH-HH
Q 043646 283 SRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI-VQ 361 (625)
Q Consensus 283 ~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~ 361 (625)
.....+.|+++.|++|+++|+. .|++++++++. +.+.... ..+....++. ..
T Consensus 189 ~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li--~~l~~~~------------------------~~~~~s~~~~~~~ 241 (346)
T TIGR03576 189 PALDLGADLVVTSTDKLMDGPR-GGLLAGRKELV--DKIKSVG------------------------EQFGLEAQAPLLA 241 (346)
T ss_pred CHHHcCCcEEEeccchhccccc-eEEEEeCHHHH--HHHHHhh------------------------cCcccCccHHHHH
Confidence 1101157899999999987677 49999998873 2221110 0011111222 22
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChH
Q 043646 362 MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGP 441 (625)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~ 441 (625)
.+.++++ ....+.+++..+...+++.+.+..+ .+..+. ..+.|.-.+. .+..
T Consensus 242 aa~~aL~-----~~~~~~~~~~l~~r~~~~~~~l~~~---~~~~~~-----~~f~~~~~~~---------------~~~~ 293 (346)
T TIGR03576 242 AVVRALE-----EFELSRIRDAFKRKEEVYLRLFDKL---NVERTP-----TGFVIKGVEE---------------EKLI 293 (346)
T ss_pred HHHHHHh-----hccHHHHHHHHHHHHHHHHHHHHhC---CCCcCC-----CeEEEEeCCC---------------CCHH
Confidence 2222222 2223455666666666666666643 332211 2233332221 1123
Q ss_pred HHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH----HHHHHHHHHH
Q 043646 442 FVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE----EFEFILAALE 517 (625)
Q Consensus 442 ~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e----did~ll~aL~ 517 (625)
+++..+++++||.+++|..+. + .++|+|||++ +++ +++.++++|+
T Consensus 294 ~~~~~ll~~~gV~v~~~~~f~--------~--------------------~~~~vRis~~---~~~~~~~~~~~~~~al~ 342 (346)
T TIGR03576 294 EIGLDLLRNYGIITITAVGMP--------G--------------------ASKTLRFDLA---AKDAERIGDDYLVEAVK 342 (346)
T ss_pred HHHHHHHHhCCEEEeCCcccC--------C--------------------CCCeEEEEEe---cChHHhcCHHHHHHHHH
Confidence 445555577899999876442 0 2489999998 334 7999999998
Q ss_pred HH
Q 043646 518 FI 519 (625)
Q Consensus 518 ~~ 519 (625)
+.
T Consensus 343 ~~ 344 (346)
T TIGR03576 343 DS 344 (346)
T ss_pred hc
Confidence 64
No 194
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=7.3e-20 Score=197.29 Aligned_cols=327 Identities=19% Similarity=0.142 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH-
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW- 198 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (625)
....+.+++.++++.|++. .+++++|+.+ +..++.++ +++||+ |+++...|.+....+
T Consensus 68 ~p~~~~Le~~lA~l~g~~~---av~~sSG~aA-i~~al~al---------------l~~Gd~--Vv~~~~~y~~t~~~~~ 126 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVA---ALLLASGQAA-ETFAILNL---------------AGAGDH--IVSSPRLYGGTYNLFH 126 (436)
T ss_pred CchHHHHHHHHHHHhCCCe---EEEEccHHHH-HHHHHHHH---------------hCCCCE--EEEeCCcchHHHHHHH
Confidence 3446689999999999863 3444477664 66555555 578885 888888888766443
Q ss_pred ---HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 199 ---RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 199 ---~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
...|++++.++ +. .|+++++++++ +++++|++++++||+|.+.|+++|+++||++|+++++|++++.|
T Consensus 127 ~~l~~~Gi~v~~vd-d~---~d~e~l~~ai~-----~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~ 197 (436)
T PRK07812 127 YTLPKLGIEVSFVE-DP---DDLDAWRAAVR-----PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATP 197 (436)
T ss_pred HHhhcCeEEEEEEC-CC---CCHHHHHHhCC-----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 33688888885 32 28999999887 68999999999999999999999999999999999999999887
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEeccccccCCCCCcccCCceEEeecccccccccccc--------
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE-------- 346 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~-------- 346 (625)
+....+ .+ ++|+++.|+||++||+++ +|.+++......... +.....-+ .+..|..
T Consensus 198 ~~~~pl-~~---GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~ 262 (436)
T PRK07812 198 YLIRPL-EH---GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQ--GRFPGFTT---------PDPSYHGVVFAELGP 262 (436)
T ss_pred ccCCch-hc---CCCEEEEecccccCCCCCeEEEEEEcCCcccccc--cccccccc---------CCcccccchhhhcch
Confidence 664443 23 899999999999997754 666666443211111 11100000 0000000
Q ss_pred -----ch--hhhhcCCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCC--C-------
Q 043646 347 -----DI--EERENGGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNT--S------- 408 (625)
Q Consensus 347 -----~~--~~~~~~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~--~------- 408 (625)
.. ......|. .+... +. +++........+.++..+.+..+.+.|++.|.+ +|+.|. +
T Consensus 263 ~~~~~~~~~~~~~~~G~~l~p~~---a~--l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~ 337 (436)
T PRK07812 263 PAYALKARVQLLRDLGSAISPFN---AF--LIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERA 337 (436)
T ss_pred hHHHHHHHHHHHHhcCCCCCHHH---HH--HHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 00 00111121 11111 11 111122335555666777799999999999887 354441 1
Q ss_pred -----CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC---chhhHhhhcCChhhHHHH
Q 043646 409 -----VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA---GPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 409 -----~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~---~~~~~~~l~~~~~~~~~~ 480 (625)
..-+++++|.+..+. -....+.+.| +.+.+.+.-|...+ .|....+..+..+...
T Consensus 338 ~~~~~~g~gg~~sf~l~~~~--------------~~~~~f~~~l-~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~-- 400 (436)
T PRK07812 338 KRLAPKGTGAVLSFELAGGV--------------EAGKAFVNAL-TLHSHVANIGDVRSLVIHPASTTHSQLTPEEQL-- 400 (436)
T ss_pred HHhCcCCCceEEEEEecCCH--------------HHHHHHHHhC-CcceEecccCCCcceeeCCCCCCcccCCHHHHH--
Confidence 124678888874321 0123455555 34444443333222 0111111222222111
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
..|+.++.||||+|. ||++.+++-|++.++...
T Consensus 401 -------~~gi~~~liRlSvGl----Ed~~dli~dl~~Al~~~~ 433 (436)
T PRK07812 401 -------ATGVTPGLVRLAVGI----EGIDDILADLEAGFAAAK 433 (436)
T ss_pred -------hcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 257778999999996 566666666666665443
No 195
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=1.2e-20 Score=194.78 Aligned_cols=223 Identities=17% Similarity=0.149 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
...++++++.+++++|++. .++++ +|+++++..++.++ +++||+ |+++...|.++..++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~--~~~~~-~Gst~a~~~~l~al---------------~~~gd~--Vlv~~~~h~s~~~~~~ 117 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH--TFFLV-NGTSSSNKAVILAV---------------CGPGDK--ILIDRNCHKSVINGLV 117 (294)
T ss_pred ChHHHHHHHHHHHHhCCCC--EEEEc-CcHHHHHHHHHHHc---------------CCCCCE--EEEeCCchHHHHHHHH
Confidence 3467889999999999752 34446 78888888777766 578886 9999999999999999
Q ss_pred HcCCeEEEEecCCC------CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCc
Q 043646 200 QSLAEVVEIGLDDN------GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (625)
Q Consensus 200 ~~G~~vv~v~~~~~------~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~ 273 (625)
..|+++++++.+.+ +.+|++++++++++. +++++|+++++ |++|.+.|+++|+++||++|+++++|+||+
T Consensus 118 ~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~---~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~ 193 (294)
T cd00615 118 LSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEH---PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHG 193 (294)
T ss_pred HCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhC---CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcch
Confidence 99999999977542 378999999999742 46899999987 789999999999999999999999999987
Q ss_pred CC-----CccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccch
Q 043646 274 GP-----YVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDI 348 (625)
Q Consensus 274 ~g-----~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (625)
.. ..+.+.... ++|+++.|+||+++++.+.|++.+++....... +...
T Consensus 194 ~~~~~~~~~~~~~~~~---~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~------------------------~~~~ 246 (294)
T cd00615 194 AHFRFHPILPSSAAMA---GADIVVQSTHKTLPALTQGSMIHVKGDLVNPDR------------------------VNEA 246 (294)
T ss_pred hhhccCcccCcchhhc---CCcEEEEchhcccchHhHHHHHHhCCCcCCHHH------------------------HHHH
Confidence 53 223333222 789999999999988876678777665311000 0011
Q ss_pred hhhhcCCChhHHHHHH--HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC
Q 043646 349 EERENGGTPQIVQMIR--AALAFWVKEYIGYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 349 ~~~~~~gt~~~~~~~~--aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~ 396 (625)
...+..++|++..+.. ++++++ ...|.+ ..++..+++++++++|.
T Consensus 247 ~~~~~ttsps~~~~asl~~a~~~~--~~~g~~-~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 247 LNLHQSTSPSYLILASLDVARAMM--ALEGKE-LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHCCCCcHHHHHHHHHHHHHHH--HHHhHH-HHHHHHHHHHHHHHHHh
Confidence 2345566777766543 344444 334554 45567777888888775
No 196
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=1.7e-19 Score=189.54 Aligned_cols=283 Identities=12% Similarity=-0.051 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
..++++.+++++|.+++ +|++| +|++++|..++..+ ++++ |++..+.|+.+...++..|
T Consensus 42 ~~~lr~~ia~~~~~~~~-~I~it-~Gs~~~l~~~~~~~----------------~~~~---vv~~~P~y~~y~~~~~~~G 100 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI-KVLIG-PGLTHFIYRLLSYI----------------NVGN---IIIVEPNFNEYKGYAFTHG 100 (332)
T ss_pred HHHHHHHHHHHhCCCcc-eEEEC-CCHHHHHHHHHHHh----------------CCCc---EEEeCCChHHHHHHHHHcC
Confidence 46699999999999877 78887 89999999887643 4553 5566888999888899999
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCCcc-
Q 043646 203 AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVK- 278 (625)
Q Consensus 203 ~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~~~- 278 (625)
++++.+|++.. ..|.+.++ . .+++++++++|+||||.+.+. ++|+++|+++|+++++|+++.--...
T Consensus 101 ~~v~~vp~~~~-~~~~~~l~----~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~ 171 (332)
T PRK06425 101 IRISALPFNLI-NNNPEILN----N----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR 171 (332)
T ss_pred CeEEEEeCCcc-cCcHHHHh----h----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc
Confidence 99999998753 34544433 2 378999999999999999884 56777888999999999995421110
Q ss_pred -ccCCCC-CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC
Q 043646 279 -INLRSR-NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 279 -id~~~~-~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
...... ....--+++.|++|.+|.|+ .+|+++.++++.+ .+.... ...
T Consensus 172 ~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~--~l~~~~---------------------------~~~ 222 (332)
T PRK06425 172 AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMK--ISRKIT---------------------------EPW 222 (332)
T ss_pred chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHH--HHHHcC---------------------------CCC
Confidence 011111 00012356679999998565 4899999887732 221100 000
Q ss_pred ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 356 TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 356 t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
+.+. .+.+++.... ...-.+...+..++.++++.+.|.++ +++++.+. . +.+.+...+
T Consensus 223 ~~~~--~~~~~l~~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~---~-g~f~~~~~~-------------- 280 (332)
T PRK06425 223 SVCD--PAIDFIRSID-LDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDP---S-ANFITFMIP-------------- 280 (332)
T ss_pred ccCH--HHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC---C-ceEEEEEcC--------------
Confidence 0011 1111111100 00012344566666788888888877 67765432 2 333333322
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAA 515 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~a 515 (625)
+..++++.|.+ +||.+++|..|... .++++||+++ +.+++++++++
T Consensus 281 ---~~~~~~~~l~~-~gi~v~~~~~f~~~---------------------------~~~~iRis~~---~~~~~~~l~~a 326 (332)
T PRK06425 281 ---DAHDFYSYLLK-NGILVRLLDDYECL---------------------------GEQYIRIAIR---RRSFNIKLVNA 326 (332)
T ss_pred ---CHHHHHHHHHH-CCeEEEECCCCCCC---------------------------CCCEEEEEeC---CHHHHHHHHHH
Confidence 14578888866 79999998766311 2479999998 88999999999
Q ss_pred HHHHH
Q 043646 516 LEFIA 520 (625)
Q Consensus 516 L~~~~ 520 (625)
|++++
T Consensus 327 l~~~~ 331 (332)
T PRK06425 327 LRNFL 331 (332)
T ss_pred HHHHh
Confidence 99764
No 197
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.1e-19 Score=191.83 Aligned_cols=305 Identities=14% Similarity=0.090 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
....+.++++++++.|.+ .++++ +|+++++..++.++ +++||+ |+++.+.|++....+.
T Consensus 51 ~pt~~~L~~~lA~l~g~~---~~i~~-~sg~~Ai~~~l~~l---------------~~~GD~--Vl~~~~~y~~~~~~~~ 109 (386)
T PRK08045 51 NPTRDVVQRALAELEGGA---GAVLT-NTGMSAIHLVTTVF---------------LKPGDL--LVAPHDCYGGSYRLFD 109 (386)
T ss_pred CccHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHH---------------cCCCCE--EEEcCCCcHHHHHHHH
Confidence 334667999999999953 46776 45567788887766 578985 9999889987554443
Q ss_pred H----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 200 Q----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 200 ~----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
. .|.+++.++ ..|+++++++++ +++++|++++++||||.+.|+++|.++|+++|+++++|++++.+
T Consensus 110 ~~~~~~gi~v~~vd-----~~d~e~l~~~l~-----~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 110 SLAKRGCYRVLFVD-----QGDEQALRAALA-----EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred HHHhhCCeEEEEeC-----CCCHHHHHHhcc-----cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 2 244666664 258999999887 57999999999999999999999999999999999999998877
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
.....+ .+ ++|+++.|++||++|+.+ .|++++++ ++. ..+.. ....
T Consensus 180 ~~~~pl-~~---gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~--~~l~~-------------------------~~~~ 228 (386)
T PRK08045 180 ALQNPL-AL---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV--TELAW-------------------------WANN 228 (386)
T ss_pred ccCCch-hh---CCCEEEeecceeccCCCCceeEEEEeCcHHHH--HHHHH-------------------------HHHh
Confidence 554333 22 789999999999998875 57766643 331 11100 0000
Q ss_pred cCCChh-HHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEE
Q 043646 353 NGGTPQ-IVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILS 416 (625)
Q Consensus 353 ~~gt~~-~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~ 416 (625)
...+.+ +.+. +..++ ...+...++..+.+..+.++|++.|.++ |+.|.- ..-+++++
T Consensus 229 ~g~~~~p~~~~l~~rgl-------~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s 301 (386)
T PRK08045 229 IGVTGGAFDSYLLLRGL-------RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLS 301 (386)
T ss_pred cCCCCCHHHHHHHHhhh-------ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEE
Confidence 011111 1111 11111 1244556677777888999999888874 444320 12367888
Q ss_pred EEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCC
Q 043646 417 FLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKP 493 (625)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~ 493 (625)
|.+..+. -....+.+.| +.+.+.+.-|...+. |....+..+.++... ..|+.+
T Consensus 302 ~~~~~~~--------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi~~ 357 (386)
T PRK08045 302 FELDGDE--------------QTLRRFLGGL-SLFTLAESLGGVESLISHAATMTHAGMAPEARA---------AAGISE 357 (386)
T ss_pred EEecCcH--------------HHHHHHHHhc-cceeEeccCCCCceeEeCCCCcccccCCHHHHH---------hcCCCC
Confidence 8874211 0023455555 344444444432221 111111222221111 256778
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHH
Q 043646 494 GWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 494 g~iRis~~~~~t~edid~ll~aL~ 517 (625)
+.||+|+|.-..++-++.+.++|+
T Consensus 358 ~liR~svGlE~~~dl~~dl~~al~ 381 (386)
T PRK08045 358 TLLRISTGIEDGEDLIADLENGFR 381 (386)
T ss_pred CeEEEEeCcCCHHHHHHHHHHHHH
Confidence 999999997444444444444443
No 198
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.86 E-value=3.2e-19 Score=192.51 Aligned_cols=339 Identities=13% Similarity=0.013 Sum_probs=206.6
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh---CCCCCCcEEEeCChHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL---GGGQADAIIFCGAGTTA 151 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~---g~~~~~~vift~sGtta 151 (625)
++.+.|+.+... ++++.+.+++.+.+...........|... .-..++|+.+++++ +++++ +|++| +|+++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~----~g~~~lr~aia~~~~~~~~~~d-~I~it-~Ga~~ 106 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPE----QGYPFLREAIAENDYRGRIDPE-EIFIS-DGAKC 106 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCC----CCCHHHHHHHHHHHHhcCCCHH-HEEEC-CCcHH
Confidence 456777766554 35677888887766432111111111111 12344666676654 56665 89998 89999
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-----------eEEEEecCCCCCCCHHH
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-----------EVVEIGLDDNGLLDIEA 220 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-----------~vv~v~~~~~~~ld~~~ 220 (625)
++..+... +.+||+ |++..+.|+.+...++..|+ +++.++.+..+.++++
T Consensus 107 al~~l~~l----------------~~~gd~--Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~- 167 (402)
T TIGR03542 107 DVFRLQSL----------------FGSDNT--VAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPD- 167 (402)
T ss_pred HHHHHHHh----------------cCCCCE--EEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCC-
Confidence 89876443 357775 99999999999888888999 9999988653222222
Q ss_pred HHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCC-CCCcEE
Q 043646 221 LRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASGPY----VKINLRSRNI-DGYDAI 292 (625)
Q Consensus 221 L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~-~~~D~v 292 (625)
+. .. .++++|++++++||||.+.+ +++|+++|++||+++|+|++++--. .+..+..... ...-++
T Consensus 168 ~~---~~----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~ 240 (402)
T TIGR03542 168 LP---EE----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIE 240 (402)
T ss_pred cc---cc----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEE
Confidence 11 11 46899999999999999988 6788999999999999999965311 1112211110 012355
Q ss_pred EEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh--cC-CChhHHHHHHHHHH
Q 043646 293 FLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE--NG-GTPQIVQMIRAALA 368 (625)
Q Consensus 293 ~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~--~~-gt~~~~~~~~aal~ 368 (625)
+.|++|.||.|+ .+|++++++++. ........ ....... .. +.+.+.+.+ +..
T Consensus 241 ~~SfSK~~g~pGlRiG~~i~~~~l~--~~~~~~~~-------------------~~~~~~~~~~~~~~s~~~q~~--~~~ 297 (402)
T TIGR03542 241 FRSFSKTAGFTGVRLGWTVVPKELT--YADGHSVI-------------------QDWERRQCTKFNGASYPVQRA--AEA 297 (402)
T ss_pred EecCccccCCCCcceEEEEecHHHh--hcchhhHH-------------------HHHHHHhhhcccCCCHHHHHH--HHH
Confidence 779999998665 489999988762 11000000 0000000 01 122222221 222
Q ss_pred HHHHhhcC---HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHH
Q 043646 369 FWVKEYIG---YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVAT 445 (625)
Q Consensus 369 ~~~~~~~g---~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~ 445 (625)
++ ...+ .....+..+..++++.+.|.+. ++++..+ .++.+.+.-.+. .++..++.+
T Consensus 298 ~l--~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~----~~~~f~~v~l~~--------------~~~~~~l~~ 356 (402)
T TIGR03542 298 AY--AGEGLQPILEAISYYMENARILRKALEAA-GFKVYGG----EHAPYLWVKTPE--------------GISSWDFFD 356 (402)
T ss_pred HH--cCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCC----CceeEEEEECCC--------------CCCHHHHHH
Confidence 22 1111 2233444556677788888775 6666544 235555555442 234567888
Q ss_pred HhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 446 LFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 446 ~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.|.+++||.+++|..|+.. .++++||++. .++++++..++.|+++
T Consensus 357 ~l~~~~gv~v~pg~~f~~~---------------------------~~~~iRis~~--~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 357 FLLYQYHVVGTPGSGFGPS---------------------------GEGFVRFSAF--GKRENIVEACERIKEA 401 (402)
T ss_pred HHHHhCCEEEeCchhhCCC---------------------------CCCEEEEEec--CCHHHHHHHHHHHHhh
Confidence 8777789999988765310 2489999974 3788888888888764
No 199
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=1.2e-19 Score=193.27 Aligned_cols=311 Identities=19% Similarity=0.174 Sum_probs=196.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+++++.+++++|.+ ..+++++|+ +++..++.++ +++||+ |+++...|++.
T Consensus 34 y~r~~~p~~~~le~~la~l~g~~---~a~~~~sG~-~Ai~~~l~~l---------------~~~gd~--Vl~~~~~y~~~ 92 (369)
T cd00614 34 YSRIGNPTVDALEKKLAALEGGE---AALAFSSGM-AAISTVLLAL---------------LKAGDH--VVASDDLYGGT 92 (369)
T ss_pred eECCCChhHHHHHHHHHHHHCCC---CEEEEcCHH-HHHHHHHHHH---------------cCCCCE--EEECCCCcchH
Confidence 34444566788999999999974 234444675 5677766665 478885 88998888887
Q ss_pred HHHH----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
...+ +..|++++.++.+ |+++++++++ +++++|++++++||+|.+.|+++|+++||++|+++++|+
T Consensus 93 ~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-----~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~ 162 (369)
T cd00614 93 YRLFERLLPKLGIEVTFVDPD-----DPEALEAAIK-----PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDN 162 (369)
T ss_pred HHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 6544 3568898888765 6889999887 579999999999999999999999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
+++.+...-.+ .+ ++|+++.|++|+++|++. .|+++.++ ++. +.+...
T Consensus 163 t~~~~~~~~~~-~~---g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~--~~l~~~----------------------- 213 (369)
T cd00614 163 TFATPYLQRPL-EL---GADIVVHSATKYIGGHSDVIAGVVVGSGEALI--QRLRFL----------------------- 213 (369)
T ss_pred CCcchhcCChh-hh---CCcEEEeccceeccCCCCceEEEEEeCcHHHH--HHHHHH-----------------------
Confidence 99877542222 22 789999999999997753 58888876 542 111100
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCC-------------CCCCcc
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNT-------------SVKRQA 413 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~-------------~~~~~~ 413 (625)
.+...++.+.... .+++. .....+...++..+++.++.++|.+.|++. +..|. ....++
T Consensus 214 --~~~~g~~~~p~~a-~~~l~----~l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~ 286 (369)
T cd00614 214 --RLALGTILSPFDA-WLLLR----GLKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGG 286 (369)
T ss_pred --HHhhCCCCCHHHH-HHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCce
Confidence 0000111121111 11111 112344455667778999999999988764 43331 012478
Q ss_pred eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCC
Q 043646 414 ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLG 490 (625)
Q Consensus 414 i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g 490 (625)
+++|.+..+. -....+.+.| +.+.+.+.-|...+. +.......+..+.. ...|
T Consensus 287 i~s~~l~~~~--------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~---------~~~g 342 (369)
T cd00614 287 VFSFELKGGL--------------EAAKKFLNAL-KLFSLAVSLGGVESLVEHPASMTHSQLPPEER---------AAAG 342 (369)
T ss_pred EEEEEeCCCH--------------HHHHHHHHcC-CcceEcccCCCCceeeeCCcccccccCCHHHH---------HhcC
Confidence 8888875211 0122344444 233333333332210 11111111111111 1246
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 491 VKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 491 ~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
+.++.+|+|+|. ||++.+++-|+..+
T Consensus 343 ~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 343 ITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 778999999996 77888888777653
No 200
>PRK06460 hypothetical protein; Provisional
Probab=99.86 E-value=1.1e-19 Score=193.52 Aligned_cols=314 Identities=14% Similarity=0.066 Sum_probs=190.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCc
Q 043646 113 SYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH 192 (625)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~ 192 (625)
+.+++......+++++.+++++|++. .++|+ +|+ +++..++.++ +++||+ |+++...|.
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~~--~v~~~-sG~-~ai~~~l~al---------------~~~Gd~--Vl~~~~~~~ 95 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAEM--GVAFS-SGM-GAISTTALAL---------------LKPGNS--VLVHRDMFG 95 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCc--EEEeC-CHH-HHHHHHHHHH---------------hCCCCE--EEEecCCcC
Confidence 33455556677889999999999853 57775 676 5677777666 578986 777765443
Q ss_pred h----hHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEE
Q 043646 193 S----NLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (625)
Q Consensus 193 s----~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~viv 268 (625)
. +...++..|++++.++.+. .+.+++.++ +++++|++++++||||.+.|+++|+++|+++|+++++
T Consensus 96 ~ty~~~~~~~~~~G~~v~~~~~~~-----~~~l~~~~~-----~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~viv 165 (376)
T PRK06460 96 RSYRFFTDYLKNWGVNVDASNPGS-----DNIIEKAKS-----KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIV 165 (376)
T ss_pred cHHHHHHHHHHhhCcEEEEECCCC-----HHHHHHhcC-----CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEE
Confidence 2 2234566799998887652 334444433 5799999999999999999999999999999999999
Q ss_pred eccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 269 DFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 269 D~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
|++++.+.....+ .. +.|+++.|++|+++|+++ .|+++.++++. +.+...
T Consensus 166 Dea~~~~~~~~~l-~~---~~divv~S~sK~l~G~~~~~~G~~~~~~~l~--~~l~~~---------------------- 217 (376)
T PRK06460 166 DATFSTPINQKPL-EL---GADIVVHSASKFLAGHNDVIAGLAAGYGKLL--NVIDQM---------------------- 217 (376)
T ss_pred ECCcCccccCChh-hc---CCCEEEeecceeccCCCCceEEEEecCHHHH--HHHHHH----------------------
Confidence 9998865322222 12 679999999999987753 68888777652 111100
Q ss_pred chhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCC--C-----------CCCc
Q 043646 347 DIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNT--S-----------VKRQ 412 (625)
Q Consensus 347 ~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~--~-----------~~~~ 412 (625)
...+.....+..+. .++. .....+...++..++++++.+.|++.|.++ |+.|. + ...+
T Consensus 218 --~~~~g~~~~~~~a~--~~l~----~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g 289 (376)
T PRK06460 218 --RRTLGTSLDPHAAY--LTLR----GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFG 289 (376)
T ss_pred --HHhcCCCCCHHHHH--HHHh----chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCc
Confidence 00111111111111 1100 111234556677778999999998888763 44431 0 1347
Q ss_pred ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC---chhhHhhhcCChhhHHHHHHHHHhCCC
Q 043646 413 AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA---GPYGHTLLAFDQTRSLEIRSAIQKGYL 489 (625)
Q Consensus 413 ~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~g~~ 489 (625)
+.++|.+..+. -....+.+.| +.+.+.+.-|..-. .|+......+..+... -.
T Consensus 290 g~~s~~~~~~~--------------~~~~~~~~~l-~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~---------~~ 345 (376)
T PRK06460 290 GVLSFEVNGGQ--------------ESALKVMKSL-KLIIPAQTLGGVNSVISHPATMSHRTLSLEERK---------IV 345 (376)
T ss_pred eEEEEEEcCcH--------------HHHHHHHHhC-CcceeccCCCCCceEEeCccccccccCCHHHHH---------hc
Confidence 78888875321 0122344444 23333333231111 0211111122211111 14
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 490 GVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 490 g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
|+.++.||+|+|. ||.+.+++-|++.+.
T Consensus 346 gi~~~liR~svGl----E~~~dl~~dl~~al~ 373 (376)
T PRK06460 346 GITDSLLRLSVGI----EDVNDLIEDLDRALS 373 (376)
T ss_pred CCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 6778999999996 566666666665554
No 201
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=7.5e-20 Score=195.72 Aligned_cols=160 Identities=21% Similarity=0.272 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
....++++.++++.|.+.. ++++ +| ++++..++.++ +++||+ |+++.+.|.+....+..
T Consensus 61 p~~~~Le~~lA~~~g~~~~--i~~~-sG-~~Ai~~~l~al---------------l~~Gd~--Vl~~~~~y~~t~~~~~~ 119 (388)
T PRK07811 61 PTRTALEEQLAALEGGAYG--RAFS-SG-MAATDCLLRAV---------------LRPGDH--IVIPNDAYGGTFRLIDK 119 (388)
T ss_pred ccHHHHHHHHHHHhCCCce--EEeC-CH-HHHHHHHHHHH---------------hCCCCE--EEEcCCCchHHHHHHHH
Confidence 3467799999999998743 6664 67 47788887776 578986 89999999876554433
Q ss_pred ----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 201 ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 201 ----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
.|++++.++. .|+++|+++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.++
T Consensus 120 ~~~~~gi~~~~~d~-----~d~e~l~~~i~-----~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~ 189 (388)
T PRK07811 120 VFTRWGVEYTPVDL-----SDLDAVRAAIT-----PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPY 189 (388)
T ss_pred hCcCCCeEEEEeCC-----CCHHHHHHhcC-----cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccc
Confidence 4778777765 38999999987 579999999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccc
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKAL 315 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~ 315 (625)
....+. . ++|++++|++|+++||++ .|+++++++.
T Consensus 190 ~~~p~~-~---gaDivv~S~sK~l~g~~~~~gG~vv~~~~~ 226 (388)
T PRK07811 190 LQQPLA-L---GADVVVHSTTKYIGGHSDVVGGALVTNDEE 226 (388)
T ss_pred cCCchh-h---CCcEEEecCceeecCCCCcEEEEEEECCHH
Confidence 543332 2 789999999999998865 4888876543
No 202
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.5e-19 Score=195.11 Aligned_cols=158 Identities=17% Similarity=0.176 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH--
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-- 198 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-- 198 (625)
...+.+++.++++.|.+ ..+++++|+.+ +..++..+ +++||+ |+++...|+.....+
T Consensus 64 p~~~~Le~~lA~leg~~---~al~~~sG~~A-i~~al~~l---------------l~~GD~--Vlv~~~~y~~t~~~~~~ 122 (431)
T PRK08248 64 PTTDVFEKRIAALEGGI---GALAVSSGQAA-ITYSILNI---------------ASAGDE--IVSSSSLYGGTYNLFAH 122 (431)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCHHHH-HHHHHHHH---------------hCCCCE--EEEccCchhhHHHHHHH
Confidence 34667899999999964 34555566655 55554444 478886 888888887655443
Q ss_pred --HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 199 --RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 199 --~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
+..|++++.++.. |+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.+.
T Consensus 123 ~~~~~Gv~v~~vd~~-----d~e~l~~ai~-----~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~ 192 (431)
T PRK08248 123 TLPKLGITVKFVDPS-----DPENFEAAIT-----DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY 192 (431)
T ss_pred HHHhCCEEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc
Confidence 4579999999863 8999999987 579999999999999999999999999999999999999988665
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEec
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLISK 313 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~~ 313 (625)
...++ ++ ++|+++.|+||++|+|+. +|.+++.+
T Consensus 193 ~~~pl-~~---gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 193 LLRPI-EH---GADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred cCChh-Hc---CCCEEEEcCccccCCCCCceEEEEEeC
Confidence 44443 33 899999999999998874 77777743
No 203
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.85 E-value=1.2e-19 Score=193.84 Aligned_cols=303 Identities=17% Similarity=0.152 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH--
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-- 197 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-- 197 (625)
.....++++.+++++|++ .++++++|+. ++..++.++ +++||+ |+++...|.+....
T Consensus 53 ~p~~~~le~~la~l~g~~---~~~~~~sG~~-Ai~~al~al---------------~~~Gd~--Vl~~~~~~~~t~~~~~ 111 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAE---RAVATATGMS-AIQAALMTL---------------LQAGDH--VVASRSLFGSTVGFIS 111 (380)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEECCHHH-HHHHHHHHH---------------hCCCCE--EEEecCCcchHHHHHH
Confidence 445778999999999984 3455646554 566655555 478886 88888777665433
Q ss_pred --HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 198 --WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 198 --~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
....|++++.++.+ |+++++++++ +++++|++++++||+|.+.|+++|+++||++|+++++|++++.+
T Consensus 112 ~~~~~~g~~v~~v~~~-----d~~~l~~~i~-----~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~ 181 (380)
T TIGR01325 112 EILPRFGIEVSFVDPT-----DLNAWEAAVK-----PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATP 181 (380)
T ss_pred HHHHHhCCEEEEECCC-----CHHHHHHhcC-----CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccc
Confidence 34569999998864 7889988886 57999999999999999999999999999999999999998755
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC-c-eEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT-P-GILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~-G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
.....+ +. ++|+++.|++|+++|++. + |+++.++++. +.+.... +..
T Consensus 182 ~~~~pl-~~---g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~--~~l~~~~-------------------------~~~ 230 (380)
T TIGR01325 182 VLQQPL-KL---GADVVVYSATKHIDGQGRVMGGVIAGSEELM--AEVAVYL-------------------------RHT 230 (380)
T ss_pred ccCCch-hh---CCCEEEeeccceecCCCCeEEEEEEeCHHHH--HHHHHHH-------------------------Hhh
Confidence 432222 22 789999999999998753 3 6777676652 2111100 001
Q ss_pred CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEEe
Q 043646 354 GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFLV 419 (625)
Q Consensus 354 ~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~~ 419 (625)
.++.+.... .+.. ......+...++..+.+.++.+.|++.|+++ |+.|.- ...+++++|.+
T Consensus 231 g~~~~p~~a---~~~l--~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l 305 (380)
T TIGR01325 231 GPAMSPFNA---WVLL--KGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDV 305 (380)
T ss_pred CCCCCHHHH---HHHH--hccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence 111111111 1111 1122234445566667888889999888775 333320 12367888887
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
. +.. ....+.+.| +.+.+.+.-|...+. |+......+.++... ..|+.++.|
T Consensus 306 ~-~~~--------------~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~li 360 (380)
T TIGR01325 306 A-DRA--------------AAWKVLDAV-ELVSITNNLGDAKSTITHPATTTHGRMQPEERA---------AAGIGDGLV 360 (380)
T ss_pred C-CHH--------------HHHHHHHcC-CcceEcccCCCCCeeeeCCCccCcccCCHHHHH---------hcCCCCCeE
Confidence 4 210 123455555 334444433332210 221111222221111 256778999
Q ss_pred EEecCCCCCHHHHHHHHHHHHH
Q 043646 497 RITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~ 518 (625)
|||+|. ||.+.+++-|++
T Consensus 361 R~svGl----E~~~dl~~dl~~ 378 (380)
T TIGR01325 361 RLSVGL----EDVDDLIADLKR 378 (380)
T ss_pred EEEecc----CCHHHHHHHHHh
Confidence 999996 556666665554
No 204
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.4e-19 Score=195.24 Aligned_cols=163 Identities=17% Similarity=0.106 Sum_probs=128.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+++++.++++.|+. . .|+|+ +|+++ +..++..+ +++||+ |++++.+|.+.
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~~-~-~v~fs-SG~~A-i~~al~~l---------------l~~Gd~--VI~~~~~y~~t 121 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGGV-H-AVAFA-SGQAA-ETAAILNL---------------AGAGDH--IVTSPRLYGGT 121 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCCC-e-EEEeC-CHHHH-HHHHHHHh---------------cCCCCE--EEECCCccHHH
Confidence 44444566788999999999984 2 57776 78855 44544444 478885 99999999988
Q ss_pred HHH----HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLS----WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~----~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
... +...|+++++++ +. .|+++++++++ ++|++|+++++.|++|.+.|+++|+++||++|+++++|+
T Consensus 122 ~~~~~~~l~~~Gi~v~~vd-~~---~d~e~l~~~l~-----~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~ 192 (437)
T PRK05613 122 ETLFLVTLNRLGIEVTFVE-NP---DDPESWQAAVQ-----PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN 192 (437)
T ss_pred HHHHHHHHHhcCeEEEEEC-CC---CCHHHHHHhCC-----ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC
Confidence 533 355799999997 32 27899999998 579999999999999999999999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEE
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLI 311 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v 311 (625)
+++.|... +...+ |+|++++|+||+++|++ ++|.+++
T Consensus 193 t~a~g~~~-~p~~~---GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 193 TIATAALV-RPLEL---GADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred CCcccccc-ChHHh---CCCEEEeeccceecCCCcceeEEEE
Confidence 99887653 22234 89999999999998764 4555555
No 205
>PLN02231 alanine transaminase
Probab=99.85 E-value=1e-18 Score=193.27 Aligned_cols=325 Identities=13% Similarity=0.034 Sum_probs=203.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhcc-CCCCceEEEEcCC
Q 043646 113 SYVGQRMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSL-RDEERWVVFLGPY 189 (625)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~ 189 (625)
|....+..++.+.+.+++.+..|. +++ +|++| +|++++|..++.++ + .+||+ |+++.+
T Consensus 164 Y~~s~G~~~lReaIA~~~~~r~g~~~~pe-~I~iT-~Ga~~ai~~~~~~l---------------~~~~gd~--Vli~~P 224 (534)
T PLN02231 164 YSHSQGIKGLRDAIAAGIEARDGFPADPN-DIFLT-DGASPAVHMMMQLL---------------IRSEKDG--ILCPIP 224 (534)
T ss_pred cCCCCCcHHHHHHHHHHHHhccCCCCCcc-cEEEe-CCHHHHHHHHHHHh---------------ccCCCCE--EEEeCC
Confidence 333334555556666666555454 344 89998 89999999999887 3 36785 999999
Q ss_pred CCchhHHHHHHcCCeEEEEecCCC--CCCCHHHHHHHHHHhhhC-CCCeEEEEecccCccccccC---HHHHHHHHHHcC
Q 043646 190 EHHSNLLSWRQSLAEVVEIGLDDN--GLLDIEALRSQLELYKAA-KRPMLGSFSACSNVTGIYSD---TRSIARLLHQYG 263 (625)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v~~~~~--~~ld~~~L~~~l~~~~~~-~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g 263 (625)
.|+.+...++..|++++.++++++ +.+|+++|++++++.... .+++++++++|+||||.+.+ +++|+++|++||
T Consensus 225 ~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~ 304 (534)
T PLN02231 225 QYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEG 304 (534)
T ss_pred CChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 999998888999999999999863 589999999999742211 26899999999999999976 567899999999
Q ss_pred CEEEEeccCcCC-C----ccccCCCC----CC--CCCc-EEEEcCCCCC-CCCC-CceEEEE---eccccccCCCCCccc
Q 043646 264 GFACFDFAASGP-Y----VKINLRSR----NI--DGYD-AIFLATHKFL-GGPG-TPGILLI---SKALYQLGSSPPSTC 326 (625)
Q Consensus 264 ~~vivD~A~~~g-~----~~id~~~~----~~--~~~D-~v~~S~hK~l-ggp~-g~G~l~v---~~~~~~l~~~~p~~~ 326 (625)
+++++|+++.-- + ....+... +. .... +++.|++|.+ |-|+ .+|++++ ++++. +.+...
T Consensus 305 l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~--~~l~k~-- 380 (534)
T PLN02231 305 LVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR--EQIYKV-- 380 (534)
T ss_pred CEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHH--HHHHHH--
Confidence 999999996521 1 11111111 00 0112 3455899966 4233 3799886 34441 111000
Q ss_pred CCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh----cC-------HHHHHHHHHHHHHHHHHhh
Q 043646 327 GGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY----IG-------YEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 327 ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~----~g-------~~~i~~~~~~l~~~l~~~L 395 (625)
. ....+++...+. +...++... .. .+.+.+..++.++.+.+.|
T Consensus 381 ----------------------~-~~~~~s~~~~Q~---~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L 434 (534)
T PLN02231 381 ----------------------A-SVNLCSNISGQI---LASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDAL 434 (534)
T ss_pred ----------------------H-hhhcCCChHHHH---HHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011122222222 111211110 01 1234566777788899999
Q ss_pred CCCCcEEEeCCCCCCCcceEEEEec--cCCCCCCccccccCCCC-CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 396 LPNQNIQVLGNTSVKRQAILSFLVY--STTNSSPENMKIERNKP-LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 396 ~~l~gv~v~~~~~~~~~~i~~f~~~--~~~~~~~~~~~~~~~~~-l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
++++++++..+. ++.+.|.-. +....+ .....+ .....++..|+++.||.+.+|..|+...
T Consensus 435 ~~~~gi~~~~p~----Ggfylw~~l~lp~~~~~-----~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~------- 498 (534)
T PLN02231 435 NSLEGVTCNKAE----GAMYLFPRIHLPQKAIK-----AAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVP------- 498 (534)
T ss_pred hcCCCceecCCC----eeeEEeccccCcHHHHH-----HHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCC-------
Confidence 988888887653 455555211 110000 000000 1133466767777899999998875210
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
...++|+++. .++++++..++.|.++..+.
T Consensus 499 -------------------g~~~~Rit~~--~~~e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 499 -------------------GTWHFRCTIL--PQEDKIPAIVSRLTEFHKSF 528 (534)
T ss_pred -------------------CCCeEEEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 1357999984 58899999999888776553
No 206
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.6e-19 Score=192.83 Aligned_cols=160 Identities=19% Similarity=0.207 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH
Q 043646 119 MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW 198 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (625)
.....+++++.+++++|.+ + .+++ ++|+. ++..++..+ +++||+ |+++...|.++...+
T Consensus 51 ~np~~~~lE~~lA~l~g~~-~-~l~~-~sG~~-Ai~~~l~~l---------------l~~GD~--Vlv~~~~y~~~~~~~ 109 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGGV-D-ALAF-NSGMA-AISTLFFSL---------------LKAGDR--VVLPMEAYGTTLRLL 109 (385)
T ss_pred CCccHHHHHHHHHHHhCCC-c-EEEe-CCHHH-HHHHHHHHH---------------hCCCCE--EEEcCCCchhHHHHH
Confidence 3445677999999999974 2 4454 46654 565555554 578885 999999999887666
Q ss_pred H---HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 199 R---QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 199 ~---~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
+ ..|++++.+. +|++++++++++ .++++|++++++||||.+.|+++|+++||++|+++++|++++.|
T Consensus 110 ~~~~~~g~~v~~~~------~d~~~l~~~i~~----~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~ 179 (385)
T PRK08574 110 KSLEKFGVKVVLAY------PSTEDIIEAIKE----GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATP 179 (385)
T ss_pred HHhhccCcEEEEEC------CCHHHHHHhcCc----cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 4 3588877764 257889998872 27999999999999999999999999999999999999999877
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEec
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISK 313 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~ 313 (625)
.....+ .. ++|++++|++|+++||+. .|++++++
T Consensus 180 ~~~~~l-~~---GaDivv~S~sK~l~g~~d~~gG~vi~~~ 215 (385)
T PRK08574 180 LLYRPL-RH---GADFVVHSLTKYIAGHNDVVGGVAVAWS 215 (385)
T ss_pred ccCChh-hh---CCcEEEeeCceeecCCCCceeEEEEECc
Confidence 543323 22 789999999999998864 36566543
No 207
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.85 E-value=4.9e-19 Score=191.56 Aligned_cols=347 Identities=11% Similarity=0.020 Sum_probs=205.2
Q ss_pred ceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHh--CCCCCCcEEEeCChHHHHH
Q 043646 77 RLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCL--GGGQADAIIFCGAGTTAAI 153 (625)
Q Consensus 77 ~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~--g~~~~~~vift~sGttaal 153 (625)
..+.|..+... ++++.+.+++.+.+.....+.....|....+..++.+.+.+++.+.. +++++ +|++| +|+.++|
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it-~Ga~~al 112 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISAD-EIFIS-DGAKCDT 112 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChh-hEEEC-CCHHHHH
Confidence 45555544433 34567888887766432111111112122223444444444444443 44555 89998 8999999
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCe-----------EEEEecCCCCCCCHHHHH
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAE-----------VVEIGLDDNGLLDIEALR 222 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~-----------vv~v~~~~~~~ld~~~L~ 222 (625)
..+... +.+||+ |++..+.|+.+...++..|++ ++.++++.++.+.++ +
T Consensus 113 ~~l~~~----------------~~~gd~--V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~- 172 (409)
T PRK07590 113 GNILDI----------------FGPDNT--IAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-L- 172 (409)
T ss_pred HHHHHh----------------cCCCCE--EEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCccc-C-
Confidence 886543 468886 999999999998888888986 888998753322222 1
Q ss_pred HHHHHhhhCCCCeEEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCC----ccccCCCCCC-CCCcEEEE
Q 043646 223 SQLELYKAAKRPMLGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPY----VKINLRSRNI-DGYDAIFL 294 (625)
Q Consensus 223 ~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~----~~id~~~~~~-~~~D~v~~ 294 (625)
.+ ++++++++++|+||||.+.+. ++|+++|++||+++++|++++.-. .+..+..... ...-+++.
T Consensus 173 ---~~----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~ 245 (409)
T PRK07590 173 ---PE----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFR 245 (409)
T ss_pred ---cc----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEe
Confidence 11 478999999999999999874 567888999999999999965211 1111211100 01235567
Q ss_pred cCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc-CCChhHHHHHHHHHHHHHH
Q 043646 295 ATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN-GGTPQIVQMIRAALAFWVK 372 (625)
Q Consensus 295 S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~aal~~~~~ 372 (625)
|++|.+|.|+ .+|++++++++. +.... +... .....+.. ..... .+.+.+.+.+ +..++
T Consensus 246 SfSK~~~~pGlRiG~~i~~~~li--~~~~~---~~~~---------~~~~~~~~-~~~~~~~~~s~~~q~a--~~~~l-- 306 (409)
T PRK07590 246 SFSKTAGFTGTRCAYTVVPKELK--GKTSD---GEGV---------SLNSLWNR-RQSTKFNGVSYIVQRA--AEAVY-- 306 (409)
T ss_pred cCccccCCcCceeEEEEcCHHHh--hhccc---cchh---------hhHHHHHH-HHhhcccCcCHHHHHH--HHHHh--
Confidence 9999997665 489999988772 21100 0000 00000000 00001 1222222221 11222
Q ss_pred hhcC---HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhh
Q 043646 373 EYIG---YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFND 449 (625)
Q Consensus 373 ~~~g---~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 449 (625)
...+ .+.+.++.+..++++.+.|.+. ++++..+ .++.+.|...++ .++..++++.|.+
T Consensus 307 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~----~g~~f~wi~~~~--------------~~~~~~~~~~l~~ 367 (409)
T PRK07590 307 SPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGG----VNAPYIWVKTPD--------------GMSSWDFFDKLLQ 367 (409)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecC----CcceEEEEECCC--------------CCCHHHHHHHHHH
Confidence 1112 2344556666677888888876 6666544 235555555442 1345677777777
Q ss_pred hcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 450 LFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 450 ~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
++||.+++|..|+.. ..+++||++. .++++++..++.|.++
T Consensus 368 ~~gv~v~pg~~f~~~---------------------------~~~~iRi~~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 368 EANVVGTPGSGFGPS---------------------------GEGYFRLSAF--GSRENVLEAMERIKKA 408 (409)
T ss_pred HCCEEEeChhHhCCC---------------------------CCCEEEEEcc--CCHHHHHHHHHHHHhh
Confidence 789999988766310 2479999963 4789999999888754
No 208
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.85 E-value=4e-19 Score=190.94 Aligned_cols=307 Identities=16% Similarity=0.159 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH---
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW--- 198 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~--- 198 (625)
...++++.|++++|.+ .++++++|+.+ +..++.++ +++||+ |+++.+.|.+....+
T Consensus 65 ~~~~Le~~iA~~~g~~---~~l~~~sG~~A-i~~al~~l---------------l~~Gd~--Vl~~~~~y~~~~~~~~~~ 123 (400)
T PRK06234 65 TSTEVENKLALLEGGE---AAVVAASGMGA-ISSSLWSA---------------LKAGDH--VVASDTLYGCTFALLNHG 123 (400)
T ss_pred cHHHHHHHHHHHhCCC---cEEEEcCHHHH-HHHHHHHH---------------hCCCCE--EEEecCccchHHHHHHHH
Confidence 4567999999999974 34555466654 66555554 578985 888888887765443
Q ss_pred -HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcCC
Q 043646 199 -RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASGP 275 (625)
Q Consensus 199 -~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~g 275 (625)
+..|++++.++.+ |+++++++++ +++++|++++|+||||.+.|+++|+++|+++ |+++++|++++.+
T Consensus 124 ~~~~G~~v~~vd~~-----d~e~l~~~i~-----~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~ 193 (400)
T PRK06234 124 LTRYGVEVTFVDTS-----NLEEVRNALK-----ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTP 193 (400)
T ss_pred HhhCCeEEEEECCC-----CHHHHHHHhc-----cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCch
Confidence 5579999998864 7999999997 5799999999999999999999999999997 9999999998877
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
+....+ .. ++|+++.|++|++++++. .|++++++++. +.+... + . ...+.
T Consensus 194 ~~~~~l-~~---g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~--~~l~~~--~--~------------------~~~~g 245 (400)
T PRK06234 194 YIQRPL-QL---GADVVVHSATKYLNGHGDVIAGFVVGKEEFI--NQVKLF--G--I------------------KDMTG 245 (400)
T ss_pred hcCCch-hh---CCcEEEeeccccccCCCCceeEEEEecHHHH--HHHHHH--H--H------------------HHhcC
Confidence 543322 22 789999999999997763 48888887762 221100 0 0 00000
Q ss_pred CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCCC-------------CCCcceEEEEe
Q 043646 354 GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNTS-------------VKRQAILSFLV 419 (625)
Q Consensus 354 ~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~~-------------~~~~~i~~f~~ 419 (625)
....++.+. +... ...-.+.+.++..+++.++.+.|.+.|.+ +|+.|.- ...+++++|.+
T Consensus 246 ~~l~p~~a~----l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l 319 (400)
T PRK06234 246 SVIGPFEAF----LIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFEL 319 (400)
T ss_pred CCCCHHHHH----HHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEe
Confidence 111122111 1111 11223445556667788899999888877 3444320 12466888877
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
..+. -....+.+.| +.+++.+.-|...+. |.......+..+... ..|+.++.+
T Consensus 320 ~~~~--------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~---------~~gi~~~l~ 375 (400)
T PRK06234 320 KGGV--------------EEGKVVMNNV-KLATLAVSLGDAETLIQHPASMTHSPYTAEERK---------EAGISDGLV 375 (400)
T ss_pred cCcH--------------HHHHHHHHhC-CcceEeccCCCCCceecCCccCCCCCCCHHHHH---------hcCCCCCeE
Confidence 4211 0124566666 456766666654331 211111122221111 146778999
Q ss_pred EEecCCCCCHHHHHHHHHHHH
Q 043646 497 RITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~ 517 (625)
|||+|.-..++=++.+.++|+
T Consensus 376 R~svGlE~~~dl~~dl~~al~ 396 (400)
T PRK06234 376 RLSVGLEDVDDIIADLKQALD 396 (400)
T ss_pred EEEeCCCCHHHHHHHHHHHHH
Confidence 999997544444444444444
No 209
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.85 E-value=2.3e-19 Score=192.89 Aligned_cols=161 Identities=22% Similarity=0.291 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH--
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-- 197 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-- 197 (625)
....+++++.+++++|++. .+++ ++|+. ++..++..+ +++||+ |+++...|......
T Consensus 64 ~p~~~~le~~lA~l~g~~~--~i~~-~sG~~-Al~~~l~~l---------------l~~Gd~--Viv~~~~y~~t~~~~~ 122 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEA--AVAL-ASGMG-AITATLWTL---------------LRPGDE--VIVDQTLYGCTFAFLH 122 (403)
T ss_pred CchHHHHHHHHHHHhCCCc--EEEE-cCHHH-HHHHHHHHH---------------cCCCCE--EEEccCccchHHHHHH
Confidence 3456779999999999853 3555 47765 577666655 578986 88888777654322
Q ss_pred --HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 198 --WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 198 --~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
++..|++++.++.+ |+++++++++ ++|++|++++++||||.+.|+++|+++|+++|+++++|++++.+
T Consensus 123 ~~~~~~G~~v~~vd~~-----d~~~l~~~i~-----~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~ 192 (403)
T PRK07503 123 HGLGEFGVTVRHVDLT-----DPAALKAAIS-----DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTP 192 (403)
T ss_pred HHHhhCCEEEEEeCCC-----CHHHHHHhcC-----ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccc
Confidence 34579999988864 7899999987 57999999999999999999999999999999999999999877
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKAL 315 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~ 315 (625)
+....+. + ++|+++.|++|+++++++ .|+++.++++
T Consensus 193 ~~~~~l~-~---g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l 230 (403)
T PRK07503 193 YLQRPLE-L---GADLVVHSATKYLGGHGDITAGLVVGGKAL 230 (403)
T ss_pred ccCCchh-h---CCCEEEccccccccCCCceeEEEEEcCHHH
Confidence 5433332 2 789999999999998764 5887766665
No 210
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=4e-19 Score=191.71 Aligned_cols=158 Identities=18% Similarity=0.170 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
....+++++.|+++.|... .+ ++++|+ +++..++.++ +++||+ |+++...|+.....+.
T Consensus 57 ~pt~~~Le~~lA~l~g~~~--~l-~~ssG~-~Ai~~al~al---------------~~~Gd~--Vl~~~~~Y~~t~~~~~ 115 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVG--AL-AVASGM-AAITYAIQTI---------------AEAGDN--IVSVAKLYGGTYNLLA 115 (425)
T ss_pred CchHHHHHHHHHHHhCCCc--ee-EehhHH-HHHHHHHHHH---------------hCCCCE--EEEeCCCcchHHHHHH
Confidence 3445679999999999642 34 444666 6677777766 478886 7787777776555543
Q ss_pred H----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 200 Q----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 200 ~----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
. .|+++.+++. .|+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.+
T Consensus 116 ~~l~~~gi~v~~~d~-----~d~e~le~ai~-----~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~ 185 (425)
T PRK06084 116 HTLPRIGIETRFAAH-----DDIAALEALID-----ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATP 185 (425)
T ss_pred HhcccceeEEEEECC-----CCHHHHHHHhc-----cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 3 4677776664 38999999997 57999999999999999999999999999999999999999877
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEe
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLIS 312 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~ 312 (625)
.....+ .+ ++|+++.|++|+++|++. +|.+++.
T Consensus 186 ~~~~p~-~~---gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 186 VLCRPF-EH---GADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred ccCChh-hc---CCCEEEECchhcccccccceeEEEEe
Confidence 653332 22 899999999999998864 4555554
No 211
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=7.2e-19 Score=187.85 Aligned_cols=333 Identities=13% Similarity=0.114 Sum_probs=204.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
...+++++++++++|.+ +++++ +|++++|..++.+++ +++||+ |+++.++|+++..+++.
T Consensus 31 ~~~~~~e~~la~~~g~~---~~v~~-~sgt~al~~~l~~~~--------------~~~Gd~--Viv~~~t~~~~~~~~~~ 90 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA---KVLLT-PSCTAALEMAALLLD--------------IQPGDE--VIMPSYTFVSTANAFVL 90 (375)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHhC--------------CCCCCE--EEECCCCcHHHHHHHHH
Confidence 35677888999999884 67888 566777877666553 578886 99999999999999999
Q ss_pred cCCeEEEEecCCC-CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc
Q 043646 201 SLAEVVEIGLDDN-GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI 279 (625)
Q Consensus 201 ~G~~vv~v~~~~~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i 279 (625)
.|++++.++++++ +.+|+++++++++ +++++|++++ ++|...++++|.++|+++|+++|+|+||+.+.. .
T Consensus 91 ~G~~~v~~d~d~~~~~~d~~~le~~i~-----~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~-~ 161 (375)
T PRK11706 91 RGAKIVFVDIRPDTMNIDETLIEAAIT-----PKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMST-Y 161 (375)
T ss_pred cCCEEEEEecCCCcCCcCHHHHHHhcC-----CCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccc-c
Confidence 9999999999875 4799999999987 5789888764 689999999999999999999999999998763 2
Q ss_pred cCCCCCCCCCcEEEEcCC--CCCCCCCCceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCC
Q 043646 280 NLRSRNIDGYDAIFLATH--KFLGGPGTPGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT 356 (625)
Q Consensus 280 d~~~~~~~~~D~v~~S~h--K~lggp~g~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt 356 (625)
+-+..+. ..|+-++|+| |.++.+.| |++++++ ++. ..++.....|...... +. .....+ .....|+
T Consensus 162 ~~~~~g~-~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~~--~~~~~~~~~g~~~~~~--~~-~~~~~~----~~~~~g~ 230 (375)
T PRK11706 162 KGRALGT-IGHIGCFSFHETKNYTAGEG-GALLINDPALI--ERAEIIREKGTNRSQF--FR-GQVDKY----TWVDIGS 230 (375)
T ss_pred CCeeeec-CcCEEEEeCCCCccccccCC-eEEEECCHHHH--HHHHHHHHcCCCcchh--hc-cCCCcc----eeeeccc
Confidence 2222211 2478888888 99974334 5566654 331 1121111111100000 00 000000 0011233
Q ss_pred hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc---EEEeCCCCCCCcceEEEEeccCCCCCCcccccc
Q 043646 357 PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN---IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE 433 (625)
Q Consensus 357 ~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g---v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~ 433 (625)
.....-+.+++... +....+.+.++.+++++++.+.|.++++ +++.............|.+.-..
T Consensus 231 ~~~~~~~~aa~~~~--ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 298 (375)
T PRK11706 231 SYLPSELQAAYLWA--QLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD---------- 298 (375)
T ss_pred ccCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC----------
Confidence 22222222332222 1122566777777888899999988762 44321111111112222221111
Q ss_pred CCCCCChHHHHHHhhhhcCeeeecCCCCCc--hhhHhh--hcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHH
Q 043646 434 RNKPLHGPFVATLFNDLFGIQARGGCACAG--PYGHTL--LAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEF 509 (625)
Q Consensus 434 ~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~--~~~~~~--l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edi 509 (625)
..+..++.+.|.+ +||.++....+.. +....+ ..-+-+.++++ ....+.+.++...+++|+
T Consensus 299 ---~~~r~~l~~~L~~-~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~-----------~~~~l~lP~~~~l~~~~~ 363 (375)
T PRK11706 299 ---LEDRSALINFLKE-AGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKE-----------SERLLRLPLFYNLTDVEQ 363 (375)
T ss_pred ---cCCHHHHHHHHHH-CCCCccccCCccCcchhhHhcCCCCCCChHHHHH-----------HhCcEeccCCCCCCHHHH
Confidence 1246789998965 7999875432211 111110 00011222222 246788999999999999
Q ss_pred HHHHHHHHHHH
Q 043646 510 EFILAALEFIA 520 (625)
Q Consensus 510 d~ll~aL~~~~ 520 (625)
++++++|++++
T Consensus 364 ~~i~~~i~~~~ 374 (375)
T PRK11706 364 RTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHh
Confidence 99999999764
No 212
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.85 E-value=2.7e-19 Score=190.77 Aligned_cols=306 Identities=16% Similarity=0.108 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
...+++++.++++.|. + .++++ +|++++|..++.++ +++||. |+++.+.|.++...+..
T Consensus 51 p~~~~le~~lA~l~g~--~-~v~~~-~gg~~Ai~~~l~al---------------l~~GD~--Vl~~~p~y~~~~~~~~~ 109 (382)
T TIGR02080 51 PTRDLLQQALAELEGG--A-GAVVT-NTGMSAIHLVTTAL---------------LGPDDL--LVAPHDCYGGTYRLLNA 109 (382)
T ss_pred chHHHHHHHHHHHhCC--C-cEEEE-cCHHHHHHHHHHHH---------------cCCCCE--EEEcCCCcHHHHHHHHH
Confidence 3456788999999984 3 57777 67888899988877 578885 88898999876554432
Q ss_pred ----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 201 ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 201 ----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
.|+++..++. .|+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.+.
T Consensus 110 ~~~~~~~~v~~~d~-----~d~~~l~~ai~-----~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~ 179 (382)
T TIGR02080 110 LAKKGCFRVLFVDQ-----GDEQALRAALA-----QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPA 179 (382)
T ss_pred HHhhcCeEEEEECC-----CCHHHHHHhcC-----cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 2466666542 37899999987 579999999999999999999999999999999999999988765
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
...++. . ++|+++.|++|+++|+.+ .|++++++... .+.+. ..+...
T Consensus 180 ~~~pl~-~---gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~-~~~l~--------------------------~~~~~~ 228 (382)
T TIGR02080 180 LQNPLA-L---GADLVLHSCTKYLNGHSDVIAGAVIAKDPQV-AEELA--------------------------WWANNL 228 (382)
T ss_pred cCCchh-h---CCCEEEeecceeccCCCCceeEEEEeCCHHH-HHHHH--------------------------HHHHcc
Confidence 433332 2 789999999999988765 57766654321 11110 000111
Q ss_pred C-ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEEe
Q 043646 355 G-TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFLV 419 (625)
Q Consensus 355 g-t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~~ 419 (625)
| +.+.... .+.. ....-.....++..+++..+.++|++.|.++ |+.|.- ..-+++++|.+
T Consensus 229 g~~~sp~~a---~l~l--r~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~ 303 (382)
T TIGR02080 229 GVTGGAFDS---YLTL--RGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFEL 303 (382)
T ss_pred CCCCCHHHH---HHHH--cccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 1 1111111 1111 0111223334555677888889998888875 444420 12467888887
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
..+. -....+.+.| +.+.+.+.-|..-+. |.......+.++.- ...|+.++.|
T Consensus 304 ~~~~--------------~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~---------~~~gi~~~li 359 (382)
T TIGR02080 304 KGGE--------------QTVRRFLGGL-SLFTLAESLGGVESLIAHPATMTHAAMGPEAR---------AEAGISDTLL 359 (382)
T ss_pred cCcH--------------HHHHHHHHcC-CcceEeccCCCCcceeECCCccCcccCCHHHH---------HhcCCCcCeE
Confidence 4211 0023455555 445555544432210 21111112221111 1256778999
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 497 RITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~~~~ 521 (625)
|||+|. ||++.+++-|++.++
T Consensus 360 RlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 360 RLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred EEEecc----CCHHHHHHHHHHHHh
Confidence 999996 566666666666553
No 213
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.85 E-value=2.4e-19 Score=190.58 Aligned_cols=302 Identities=14% Similarity=0.054 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH---
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS--- 197 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (625)
.....+++.++++.|++ .++++ +|+++++..++.++ +++||+ |++++..|+.....
T Consensus 50 Pt~~~lE~~lA~l~g~~---~~~~~-~sG~~Ai~~al~al---------------l~~GD~--Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 50 LTHFALQDAMCELEGGA---GCYLY-PSGLAAVTNSILAF---------------VKAGDH--VLMVDSAYEPTRYFCDI 108 (377)
T ss_pred ccHHHHHHHHHHHhCCC---cEEEE-CcHHHHHHHHHHHh---------------cCCCCE--EEEcCCCcHHHHHHHHH
Confidence 34567899999999974 45666 34566677776665 578986 88888787665432
Q ss_pred -HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 198 -WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 198 -~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
....|+++..++.+ +.++++++++ ++|++|++++++|++|.+.|+++|+++||++|+++++|++++.|+
T Consensus 109 ~~~~~gi~v~~~d~~-----~~e~l~~~i~-----~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~ 178 (377)
T TIGR01324 109 VLKRMGVDITYYDPL-----IGEDIATLIQ-----PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGL 178 (377)
T ss_pred HHHhcCcEEEEECCC-----CHHHHHHhcC-----CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 23468888877543 2377888887 689999999999999999999999999999999999999999887
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
..-.+ .+ ++|+++.|.+||++|+.+ .|+++.+++.. ..+. ......
T Consensus 179 ~~~pl-~~---gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~--~~l~--------------------------~~~~~~ 226 (377)
T TIGR01324 179 LFKPL-EH---GVDISIQAGTKYLVGHSDIMIGTVVANARTW--DQLR--------------------------EHSYLM 226 (377)
T ss_pred ccCcc-cc---CceEEEecCceeccCCCCceEEEEEeCHHHH--HHHH--------------------------HHHHHh
Confidence 63322 23 899999999999998865 47777776552 1110 001112
Q ss_pred CC-hhHHHH--HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCCC-------------CCCcceEEE
Q 043646 355 GT-PQIVQM--IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNTS-------------VKRQAILSF 417 (625)
Q Consensus 355 gt-~~~~~~--~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~~-------------~~~~~i~~f 417 (625)
|+ .+.... +..+++. .....++....+..+.+.|.+.|.+ +++.|.- ...+++++|
T Consensus 227 G~~l~p~~a~~~~rgl~t-------l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~ 299 (377)
T TIGR01324 227 GQMVDADDAYTTLRGLRT-------LGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSF 299 (377)
T ss_pred CCCCCHHHHHHHHhhhhh-------HHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEE
Confidence 22 111111 1111111 2233445555677788888887776 4555420 124678888
Q ss_pred EeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEE
Q 043646 418 LVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTR 497 (625)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iR 497 (625)
.+.... .-....+.+.| +.+++.+.-|...+.- ......+.... + . ..|+.++.||
T Consensus 300 ~l~~~~-------------~~~~~~~~~~l-~~~~~~~slG~~~sl~-~~~~~~~~~~~----~--~---~~~~~~~liR 355 (377)
T TIGR01324 300 VLQRLT-------------QKQVHAFLDHL-QLFGLGYSWGGYESLA-LCNQPELGHRP----N--I---KRNLEGPLIR 355 (377)
T ss_pred EECCCC-------------HHHHHHHHHhC-CcceEeccCCCcccee-ecCCCCCCHHH----H--H---hccCCCCEEE
Confidence 884311 01134677777 4567776665533210 00000111111 0 0 1234458999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 043646 498 ITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 498 is~~~~~t~edid~ll~aL~~~~ 520 (625)
+|+|.- |.+.+++-|++.+
T Consensus 356 ~svGlE----~~~dl~~dl~~al 374 (377)
T TIGR01324 356 VHIGLE----NVDDLKADLKAGF 374 (377)
T ss_pred EEeCCC----CHHHHHHHHHHHH
Confidence 999974 4555555555443
No 214
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=8.5e-19 Score=182.77 Aligned_cols=341 Identities=12% Similarity=0.092 Sum_probs=230.5
Q ss_pred CCCCcchHHHHHHHHHhhCCCCCC--CCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhc
Q 043646 84 TASGRSLRYIEDYIINNVLPFYGN--THTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMG 161 (625)
Q Consensus 84 ~~~~~~p~~v~ea~~~~l~~~~~n--~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~ 161 (625)
++-+..|+.|++++++.+..+.+. .-.+.++.+..+.++++++++.++++++.+.+.+|+|..+|.|.++..+...+
T Consensus 10 aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl- 88 (364)
T PRK12462 10 GGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF- 88 (364)
T ss_pred CCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc-
Confidence 334567899999999888654221 11123557788899999999999999999766678777777888888887766
Q ss_pred ccccchhhhhhhhccCCCCceEEEEcCCCCchhH--HHHHHcCCeEEEEecC----CCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 162 ITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL--LSWRQSLAEVVEIGLD----DNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~----~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
+.+|++..-++. ..+.+.. .-.+..| ++..+... ....++++.++ +. ++.+
T Consensus 89 --------------l~~g~~~~~~~~-tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~-----~d~~ 145 (364)
T PRK12462 89 --------------SRPGAAAPEYVT-TGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WD-----ARAP 145 (364)
T ss_pred --------------CCCCCcEEEEEe-CCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC-----CCCc
Confidence 577876220233 3333332 1233445 55554321 12355666541 22 3578
Q ss_pred EEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 236 LGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
.|.+++..+.||+..| ++.+.+++++++|++++++..++|+.++ |+++.+.+|.+| |.|++++++++++
T Consensus 146 ~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~-----dvi~agsQKnlg-P~Gltvvivs~~a 214 (364)
T PRK12462 146 FRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY-----GMVYAHAQKNLG-PAGVTVAIIRRAL 214 (364)
T ss_pred EEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHHc-----cEEEeeccccCC-CCceEEEEECHHH
Confidence 9999999999999987 3344479999999999999999999864 999999999998 9899999999999
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhh-cCHHHHHHHHHHHHHHHH
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEY-IGYEVIKKQEDVYIESAL 392 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~-~g~~~i~~~~~~l~~~l~ 392 (625)
++...+..+ .. ..|...........||++..+. ..+++++. +. .|.+.+.++.++.++.++
T Consensus 215 --l~~~~~~~p--~~-----------ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~-~e~GGl~~~~~r~~~ka~~ly 278 (364)
T PRK12462 215 --LERVPDTLP--PM-----------LDFRTHVEHRSNYNTPPVFAIYVMALVLRWIR-DEIGGVHAMRDINARKAAMLY 278 (364)
T ss_pred --HhhccccCC--ch-----------hhHHHHHhcCCCCCCchHHHHHHHHHHHHHHH-HhccCHHHHHHHHHHHHHHHH
Confidence 433322111 01 0111111222334588888875 45666664 33 499999999999999999
Q ss_pred HhhCCCCcEEEeCCCCC-CCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhc
Q 043646 393 GRILPNQNIQVLGNTSV-KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLA 471 (625)
Q Consensus 393 ~~L~~l~gv~v~~~~~~-~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~ 471 (625)
+.+.+++++-...-... +..-+++|.+..+. + ...+.+.+ +++|+.--.|.
T Consensus 279 ~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~--------------l-~~~f~~~a-~~~gl~~lkGh------------ 330 (364)
T PRK12462 279 ATLDALNEVIDCHAHRAARSTMNVAFRFRQPR--------------L-DTLFKEQS-TEAGFCGLSGH------------ 330 (364)
T ss_pred HHHHhCCCcccCCCChhhcCcceEEEEcCCHH--------------H-HHHHHHHH-HHCCCccccCC------------
Confidence 99999876543322223 33446777654321 1 23455555 34677654332
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.. -|.+|+|+-..++.++++.|++.++++.++
T Consensus 331 -----------------r~--vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 331 -----------------RS--IGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred -----------------cc--cCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 11 266999998889999999999999987654
No 215
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=2.6e-19 Score=190.39 Aligned_cols=158 Identities=14% Similarity=0.073 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH----H
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS----W 198 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~----~ 198 (625)
...+++.|+++.+.. .++++ +|+++++..++.++ +++||+ |+++...|...... +
T Consensus 63 ~~~Le~~iA~le~~~---~~~~~-~sG~~Ai~~~l~al---------------l~~GD~--Vvv~~~~Y~~t~~l~~~~l 121 (394)
T PRK09028 63 HFAFQAAIVELEGGA---GTALY-PSGAAAISNALLSF---------------LKAGDH--LLMVDSCYEPTRDLCDKIL 121 (394)
T ss_pred HHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHH---------------hCCCCE--EEEECCCcHHHHHHHHHhh
Confidence 456889999998764 45666 45666677776665 588996 88878788666532 2
Q ss_pred HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc
Q 043646 199 RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK 278 (625)
Q Consensus 199 ~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~ 278 (625)
...|+++..++.+ +.+.++++++ ++|++|++++|+||||.+.|+++|+++||++|+++++|++++.|...
T Consensus 122 ~~~Gi~v~~v~~~-----~~e~l~~~l~-----~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~ 191 (394)
T PRK09028 122 KGFGIETTYYDPM-----IGEGIRELIR-----PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINS 191 (394)
T ss_pred hhcceEEEEECCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccC
Confidence 3468888877643 5677888886 68999999999999999999999999999999999999999887532
Q ss_pred ccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccc
Q 043646 279 INLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKAL 315 (625)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~ 315 (625)
+.-++ |+|+++.|.|||++|+.. .|+++.+++.
T Consensus 192 -~Pl~~---GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~ 226 (394)
T PRK09028 192 -RPFEM---GVDISIQAATKYIVGHSDVMLGTATANEKH 226 (394)
T ss_pred -Ccccc---CceEEEEeCCeEecCCCCEEEEEEECCHHH
Confidence 22233 899999999999999964 3555444443
No 216
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.9e-19 Score=190.36 Aligned_cols=305 Identities=15% Similarity=0.151 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH
Q 043646 119 MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW 198 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (625)
......++++.++++.|.+. .++ +++|+. ++..++. + +++||+ |+++.+.|.+....+
T Consensus 48 ~~p~~~~Le~~lA~l~g~~~--~~~-~~sG~a-ai~~~~~-~---------------l~~Gd~--Viv~~~~y~~~~~~~ 105 (377)
T PRK07671 48 GNPTRAALEELIAVLEGGHA--GFA-FGSGMA-AITAVMM-L---------------FSSGDH--VILTDDVYGGTYRVM 105 (377)
T ss_pred CChHHHHHHHHHHHHhCCCc--eEE-eCCHHH-HHHHHHH-H---------------hCCCCE--EEECCCccchHHHHH
Confidence 34557789999999999853 355 458875 5655543 2 478886 888888888655433
Q ss_pred ----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 199 ----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 199 ----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
...|++++.++.. |+++++++++ +++++|++++|+||||.+.|+++|+++|+++|+++++|++++.
T Consensus 106 ~~~~~~~G~~v~~v~~~-----d~~~l~~ai~-----~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~ 175 (377)
T PRK07671 106 TKVLNRFGIEHTFVDTS-----NLEEVEEAIR-----PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT 175 (377)
T ss_pred HHHHhcCCeEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc
Confidence 3469999988743 8999999997 5899999999999999999999999999999999999999876
Q ss_pred CCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 275 PYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 275 g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
++....+ .+ ++|+++.|++|+++||.+ .|+++++++.. .+.+.. .+..
T Consensus 176 ~~~~~p~-~~---g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l-~~~~~~-------------------------~~~~ 225 (377)
T PRK07671 176 PYWQSPI-SL---GADIVLHSATKYLGGHSDVVAGLVVVNSPEL-AEDLHF-------------------------VQNS 225 (377)
T ss_pred cccCChh-hh---CCeEEEecCcccccCCccceeEEEEeCcHHH-HHHHHH-------------------------HHHh
Confidence 5543222 22 789999999999998864 46666654321 111100 0001
Q ss_pred cCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEE
Q 043646 353 NGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFL 418 (625)
Q Consensus 353 ~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~ 418 (625)
..+..+.... .+.. ..........++..+++..+.++|.+.|++. ++.|.- ...+++++|.
T Consensus 226 ~g~~~~~~~a---~l~~--~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~ 300 (377)
T PRK07671 226 TGGILGPQDS---WLLL--RGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFD 300 (377)
T ss_pred hcCCCCHHHH---HHHH--cCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEE
Confidence 1122211111 0111 0111133345566677888999999888874 444421 1236788887
Q ss_pred eccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcE
Q 043646 419 VYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGW 495 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~ 495 (625)
+ .+. -....+...| +.+.+.+.-|...+. |....+..+..+... -.|+.++.
T Consensus 301 ~-~~~--------------~~~~~f~~~l-~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~---------~~gi~~~l 355 (377)
T PRK07671 301 V-GSE--------------ETANKVLERL-QYFTLAESLGAVESLISIPSQMTHASIPADRRK---------ELGITDGL 355 (377)
T ss_pred e-CCH--------------HHHHHHHHhC-CcceEccCCCCCCeEeECCCccccccCCHHHHH---------hcCCCCCe
Confidence 7 221 0122344444 334444444443221 111111222221111 15777899
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q 043646 496 TRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 496 iRis~~~~~t~edid~ll~aL~~~ 519 (625)
||||+|. ||.+.+++-|+..
T Consensus 356 iR~svGl----E~~~dl~~dl~~a 375 (377)
T PRK07671 356 IRISVGI----EDGEDLIEDLAQA 375 (377)
T ss_pred EEEEecc----CCHHHHHHHHHHH
Confidence 9999996 5566666666554
No 217
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.84 E-value=6.2e-19 Score=187.52 Aligned_cols=329 Identities=13% Similarity=0.071 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
...+++++.+++++|.+ .++.++|| |++|.+++.+++ +++||+ |++++.++++...++..
T Consensus 25 ~~~~~fE~~~a~~~g~~---~~~~~~sg-t~Al~~al~~l~--------------~~~gde--Vi~p~~t~~~~~~ai~~ 84 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK---YAVAVSSG-TSALHLALRALG--------------LGPGDE--VIVPAYTFPATASAILW 84 (363)
T ss_dssp HHHHHHHHHHHHHHTSS---EEEEESSH-HHHHHHHHHHTT--------------GGTTSE--EEEESSS-THHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCCh-hHHHHHHHHhcC--------------CCcCce--EecCCCcchHHHHHHHH
Confidence 45778899999999975 56777566 555888888885 678996 99999999999999999
Q ss_pred cCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc
Q 043646 201 SLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI 279 (625)
Q Consensus 201 ~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i 279 (625)
.|++++++++++ ++.+|+++++++|+ +++++|+++|.. |...|+++|.++|+++|++||.|+||+.|...-
T Consensus 85 ~G~~pv~~Di~~~~~~id~~~~~~~i~-----~~t~ai~~~h~~---G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~ 156 (363)
T PF01041_consen 85 AGAEPVFVDIDPETLNIDPEALEKAIT-----PKTKAILVVHLF---GNPADMDAIRAIARKHGIPLIEDAAQAFGARYK 156 (363)
T ss_dssp TT-EEEEE-BETTTSSB-HHHHHHHHH-----TTEEEEEEE-GG---GB---HHHHHHHHHHTT-EEEEE-TTTTT-EET
T ss_pred hccEEEEEeccCCcCCcCHHHHHHHhc-----cCccEEEEecCC---CCcccHHHHHHHHHHcCCcEEEccccccCceeC
Confidence 999999999995 78999999999999 689999988865 999999999999999999999999999987543
Q ss_pred cCCCCCCCCCcEEEEcCC--CCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCCh
Q 043646 280 NLRSRNIDGYDAIFLATH--KFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTP 357 (625)
Q Consensus 280 d~~~~~~~~~D~v~~S~h--K~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~ 357 (625)
+-..+ . .-|+.++|+| |.+....| |+++++++... +.++.+...|.... ....+.......+.....
T Consensus 157 g~~~G-~-~gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~-~~~~~~~~~g~~~~-------~~~~~~~~~~~g~n~rm~ 225 (363)
T PF01041_consen 157 GRPVG-S-FGDIAIFSFHPTKIITTGEG-GAVVTNDPELA-ERARALRNHGRSRD-------AFRRYRHELPPGYNFRMS 225 (363)
T ss_dssp TEETT-S-SSSEEEEESSTTSSS-SSS--EEEEESTHHHH-HHHHHHTBTTEETS-------ECSTTEESSSS--B-B-B
T ss_pred CEecc-C-CCCceEecCCCCCCCcCCCC-eeEEecHHHHH-HHhhhhhccCcCcc-------ccccccccccCCcccccH
Confidence 32211 1 2388888875 99865555 88888875421 11111111110000 000000000001111112
Q ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCC-cceEEEEeccCCCCCCccccccCCC
Q 043646 358 QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKR-QAILSFLVYSTTNSSPENMKIERNK 436 (625)
Q Consensus 358 ~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~-~~i~~f~~~~~~~~~~~~~~~~~~~ 436 (625)
++ .+++... +..-.+.+.++.+++++++.+.|.+++++.......... .....|.+.-+. ..
T Consensus 226 ~~----~AAigl~--QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~-----------~~ 288 (363)
T PF01041_consen 226 EL----QAAIGLA--QLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD-----------EA 288 (363)
T ss_dssp HH----HHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC-----------CG
T ss_pred HH----HHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc-----------cc
Confidence 22 2222222 222356677777888999999999999987765433221 233233332221 11
Q ss_pred CCChHHHHHHhhhhcCeeeecCCC-CCc--hhhHhhh---cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 437 PLHGPFVATLFNDLFGIQARGGCA-CAG--PYGHTLL---AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 437 ~l~~~~v~~~L~~~~gI~v~~G~~-~~~--~~~~~~l---~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
..+...+.+.|.+ .||.++.... +-. +...... .-+-+.+..+ ....+.+.++..++++|++
T Consensus 289 ~~~rd~l~~~L~~-~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l-----------~~r~l~LP~~~~lt~edv~ 356 (363)
T PF01041_consen 289 LADRDELVEALRA-RGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERL-----------SQRLLSLPIHPRLTEEDVD 356 (363)
T ss_dssp CSTHHHHHHHHHH-TTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHH-----------HHHEEEEEHSTTSCHHHHH
T ss_pred cchHHHHHHHHHH-CCCcccccccCchhhhHHHHhcCccccCCCHHHHHH-----------HhCeEECcCCCCCCHHHHH
Confidence 1346789999966 6999987551 111 1101110 0011233322 2478999999999999999
Q ss_pred HHHHHHH
Q 043646 511 FILAALE 517 (625)
Q Consensus 511 ~ll~aL~ 517 (625)
+++++|+
T Consensus 357 ~I~~~ir 363 (363)
T PF01041_consen 357 YIAEAIR 363 (363)
T ss_dssp HHHHHHH
T ss_pred HHhhccC
Confidence 9999985
No 218
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=4.1e-19 Score=190.06 Aligned_cols=158 Identities=17% Similarity=0.230 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH---
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL--- 196 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--- 196 (625)
....+++++.++++.|+.. .++|+ +| ++++..++.++ +++||+ |+++...|++...
T Consensus 46 ~p~~~~lE~~la~leg~~~--~v~~s-sG-~~Ai~~~l~al---------------l~~Gd~--Vv~~~~~y~~t~~~~~ 104 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVG--TVCFA-TG-MAAIAAVFLTL---------------LRAGDH--LVSSQFLFGNTNSLFG 104 (397)
T ss_pred CHHHHHHHHHHHHHhCCCe--EEEeC-CH-HHHHHHHHHHH---------------cCCCCE--EEECCCccccHHHHHH
Confidence 4456779999999999863 46665 77 46677776665 578986 8888888876543
Q ss_pred HHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 197 SWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 197 ~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
.+...|++++.++.. |+++++++++ ++|++|++++++||||.+.|+++|+++||++|+++++|++++.++
T Consensus 105 ~l~~~G~~v~~v~~~-----d~e~l~~~l~-----~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~ 174 (397)
T PRK05939 105 TLRGLGVEVTMVDAT-----DVQNVAAAIR-----PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW 174 (397)
T ss_pred HHHhcCCEEEEECCC-----CHHHHHHhCC-----CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc
Confidence 355679999999863 7899999987 689999999999999999999999999999999999999988764
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEe
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLIS 312 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~ 312 (625)
.++...+ ++|+++.|++|+++|++. +|.+++.
T Consensus 175 -~~~~~~~---gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 175 -LFRPKDV---GASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred -ccCcccc---CCEEEEecCeecccCCCCeEEEEEec
Confidence 2344344 899999999999998654 4555554
No 219
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.84 E-value=5.4e-19 Score=189.67 Aligned_cols=309 Identities=16% Similarity=0.139 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH---
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS--- 197 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (625)
...+++++.++++.|.+ ..+++++|+.+ +..++.++ +++||+ |+++...|......
T Consensus 70 p~~~~le~~lA~l~g~~---~al~~~sG~~A-i~~~l~al---------------l~~Gd~--Vl~~~~~~~~t~~~~~~ 128 (403)
T PRK07810 70 PTVSMFEERLRLIEGAE---ACFATASGMSA-VFTALGAL---------------LGAGDR--LVAARSLFGSCFVVCNE 128 (403)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECChHHH-HHHHHHHH---------------hCCCCE--EEEccCCcchHHHHHHH
Confidence 34677999999999975 23444577766 44444444 478885 88887777554433
Q ss_pred -HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 198 -WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 198 -~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
++..|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.+.
T Consensus 129 ~~~~~G~~v~~vd~~-----d~~~l~~ai~-----~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~ 198 (403)
T PRK07810 129 ILPRWGVETVFVDGE-----DLSQWEEALS-----VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPL 198 (403)
T ss_pred HHHHcCcEEEEECCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccc
Confidence 34569999999753 8999999997 579999999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
....+ .. ++|++++|++|+++|.+. .|+++.+++... ..+... .+...
T Consensus 199 ~~~~~-~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~-~~l~~~-------------------------~~~~g 248 (403)
T PRK07810 199 LQRGL-PL---GADVVVYSGTKHIDGQGRVLGGAILGDREYID-GPVQKL-------------------------MRHTG 248 (403)
T ss_pred cCChh-hc---CCcEEEccCCceecCCcCceeEEEEeChHHHH-HHHHHH-------------------------HHHhC
Confidence 53333 22 789999999999987653 477777766421 011000 00111
Q ss_pred CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCcceEEEEec
Q 043646 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQAILSFLVY 420 (625)
Q Consensus 355 gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~~i~~f~~~ 420 (625)
..++... +++... ...-.+.+.++..+++.++.++|++.|.+. |+.|.- ...+++++|.+.
T Consensus 249 ~~~s~~~---a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 249 PALSAFN---AWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred CCCCHHH---HHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 1111111 111111 222344555666777888889999988874 443310 123667888774
Q ss_pred cCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEE
Q 043646 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTR 497 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iR 497 (625)
...+.. .-....+++.| +.+.+.+.-|...+. |....+..+..+... ..|+.++.+|
T Consensus 324 ~~~~~~----------~~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~---------~~gi~~~lvR 383 (403)
T PRK07810 324 APEDAA----------KKRAFEVLDKL-RVIDISNNLGDAKSLITHPATTTHRAMGPEGRA---------AIGLGDGVVR 383 (403)
T ss_pred CCCCcC----------HHHHHHHHHhC-CceEEeccCCCCcceeeCCCccccccCCHHHHH---------hcCCCCCeEE
Confidence 311000 00013455555 344444444433221 111111122221111 1566789999
Q ss_pred EecCCCCCHHHHHHHHHHHHHH
Q 043646 498 ITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 498 is~~~~~t~edid~ll~aL~~~ 519 (625)
||+|. |+++.+++-|++.
T Consensus 384 ~svGl----E~~~dli~dl~~A 401 (403)
T PRK07810 384 LSVGL----EDTDDLIADLDRA 401 (403)
T ss_pred EEecc----CCHHHHHHHHHHh
Confidence 99996 5666666666654
No 220
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.84 E-value=9.1e-19 Score=186.56 Aligned_cols=310 Identities=14% Similarity=0.048 Sum_probs=193.5
Q ss_pred cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC---CCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 88 RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG---GQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~---~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
+.++.+.+++.+..... .|....+..++.+.+.+++.+..|. +++ +|++| +|++++|..++.++.
T Consensus 40 ~~~~~~~~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~-~I~it-~G~~~~i~~~~~~l~--- 107 (364)
T PRK07865 40 PVPPVIQEALAAAADAP-------GYPTTAGTPELREAIVGWLARRRGVTGLDPA-AVLPV-IGSKELVAWLPTLLG--- 107 (364)
T ss_pred CCCHHHHHHHHHHHhhC-------CCCCccCCHHHHHHHHHHHHHHcCCCCCCcc-cEEEc-cChHHHHHHHHHHHc---
Confidence 34567777775543210 1222223345566666777666564 355 89988 899999988877652
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
+++||. |+++.+.|+.+...++..|++++.++ +++++.. .++++|++++++|
T Consensus 108 -----------~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~~~-------~~~~l~~--------~~~~~v~~~~p~N 159 (364)
T PRK07865 108 -----------LGPGDV--VVIPELAYPTYEVGARLAGATVVRAD-------SLTELGP--------QRPALIWLNSPSN 159 (364)
T ss_pred -----------CCCCCE--EEECCCCcccHHHHHHhcCCEEEecC-------ChhhCCc--------ccceEEEEcCCCC
Confidence 468885 99999999999888888999988775 2233221 4689999999999
Q ss_pred ccccccC---HHHHHHHHHHcCCEEEEeccCcCCCc-cccCCCCC------CCCCcEEEEcCCCCCCCCC-CceEEEEec
Q 043646 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPYV-KINLRSRN------IDGYDAIFLATHKFLGGPG-TPGILLISK 313 (625)
Q Consensus 245 ~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~-~id~~~~~------~~~~D~v~~S~hK~lggp~-g~G~l~v~~ 313 (625)
|||.+.+ +++|.++|+++|+++++|++++.-.. ...+..+. ...-.+++.|++|.|+.|+ .+|+++.++
T Consensus 160 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~ 239 (364)
T PRK07865 160 PTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP 239 (364)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH
Confidence 9999977 46788889999999999999763111 10011000 0012477889999997665 389998877
Q ss_pred cccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Q 043646 314 ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALG 393 (625)
Q Consensus 314 ~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~ 393 (625)
++. ..+... ........+.+.+. ++..++ .+....+..+++.+..++.+.+
T Consensus 240 ~~~--~~~~~~------------------------~~~~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~~~~~~~~~l~~ 290 (364)
T PRK07865 240 ALV--AELLEV------------------------RKHAGMMVPAPVQA--AMVAAL-GDDAHVREQRERYARRRAVLRP 290 (364)
T ss_pred HHH--HHHHHH------------------------HHhcCCCcCHHHHH--HHHHHh-CCHHHHHHHHHHHHHHHHHHHH
Confidence 762 111000 00001112222221 122222 1212234555666667788888
Q ss_pred hhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCC
Q 043646 394 RILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFD 473 (625)
Q Consensus 394 ~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~ 473 (625)
.|.+. ++.+..+ .++.+.+...+. +..++.+.|. ++||.+++|..+...
T Consensus 291 ~L~~~-g~~~~~~----~~~~~~~~~~~~----------------~~~~~~~~l~-~~gv~v~pg~~f~~~--------- 339 (364)
T PRK07865 291 ALEAA-GFRVDHS----EAGLYLWATRGE----------------DCWDTVAWLA-ERGILVAPGDFYGPA--------- 339 (364)
T ss_pred HHHHc-CCcccCC----CccEEEEEeCCC----------------CHHHHHHHHH-HCCEEEeCccccCcC---------
Confidence 88775 6665544 234444333221 2346777774 579999988755311
Q ss_pred hhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 474 QTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 474 ~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
.++++||+++. +++++++.++.|+
T Consensus 340 ------------------~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 340 ------------------GAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred ------------------CCCEEEEEecC--CHHHHHHHHHHhh
Confidence 24899999974 6899999998875
No 221
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.84 E-value=3.7e-18 Score=174.69 Aligned_cols=411 Identities=13% Similarity=0.064 Sum_probs=277.1
Q ss_pred cccccccccCCCCCCC-CChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCC
Q 043646 33 RQTCSEFKNDHHPPHS-KPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTS 111 (625)
Q Consensus 33 ~~~~~~~~~~~~~~~~-~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~ 111 (625)
.+.-+..++..+.|+. ++.++.++.+.+.+...-.++.+| +...|+..+.+-+ +++.-|...- .+.-+.
T Consensus 34 ~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP---~fhAyfpa~~s~~---siladmLs~~---i~~vGF- 103 (511)
T KOG0628|consen 34 KPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHP---HFHAYFPAGNSYP---SILADMLSGG---IGCVGF- 103 (511)
T ss_pred CcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCC---ceeeEccCccchH---HHHHHHHhcc---cccccc-
Confidence 3344556666666666 888999999999998888999998 6678887766555 3333332222 122222
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhCCC---------CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCC---
Q 043646 112 DSYVGQRMTKMVHEASNYIKRCLGGG---------QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDE--- 179 (625)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~ia~~~g~~---------~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g--- 179 (625)
++..++..+++..-+..|++++++.+ ....|+. ++.+.+.+-.++.+.. ..+..++.+
T Consensus 104 tW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lvallaaR~---------~~i~~~k~~~p~ 173 (511)
T KOG0628|consen 104 TWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVALLAART---------EKIEEIKSRPPE 173 (511)
T ss_pred eeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHHHHHHHH---------HHHHHhhcCCCc
Confidence 24456778889889999999998875 2214566 4777887777776652 222222222
Q ss_pred -------CceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCC-CeEEEEecccCccccccC
Q 043646 180 -------ERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKR-PMLGSFSACSNVTGIYSD 251 (625)
Q Consensus 180 -------d~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~-~~lv~~~~~~n~TG~~~~ 251 (625)
.+.+++++++.|.|+.++....|.+++.++.+.+..++.+.|+++|.++...+- |..++.+-.++.+-.+++
T Consensus 174 ~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~ 253 (511)
T KOG0628|consen 174 LHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDE 253 (511)
T ss_pred ccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCcccccccc
Confidence 245788999999999999888899999999999889999999999998766553 678888888888888999
Q ss_pred HHHHHHHHHHcCCEEEEeccCcCCCc-cccCCCC--CCCCCcEEEEcCCCCCCCCCCceEEEEecccccc--CCCCCccc
Q 043646 252 TRSIARLLHQYGGFACFDFAASGPYV-KINLRSR--NIDGYDAIFLATHKFLGGPGTPGILLISKALYQL--GSSPPSTC 326 (625)
Q Consensus 252 l~~I~~la~~~g~~vivD~A~~~g~~-~id~~~~--~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l--~~~~p~~~ 326 (625)
+++|..+|+++|+|+|||+|+++.+- ...++.+ +.+.+|.+.+++|||+..-..|..|++++..... -...|.+.
T Consensus 254 l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL 333 (511)
T KOG0628|consen 254 LEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYL 333 (511)
T ss_pred HHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhh
Confidence 99999999999999999999775432 2223322 3457899999999999777778899998874110 11233332
Q ss_pred CCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHH-HHhhcCHHHHHHHH---HHHHHHHHHhhCCCCcEE
Q 043646 327 GGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFW-VKEYIGYEVIKKQE---DVYIESALGRILPNQNIQ 402 (625)
Q Consensus 327 ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~-~~~~~g~~~i~~~~---~~l~~~l~~~L~~l~gv~ 402 (625)
-+....+.. +...+--+..+|| ++ +..| .....|.+.++++. .+|++.+.+.+.+-+.++
T Consensus 334 ~h~~~~~~~----Dyrhwqipl~rRf-----------RS-LKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE 397 (511)
T KOG0628|consen 334 KHAYQGSAP----DYRHWQIPLGRRF-----------RS-LKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFE 397 (511)
T ss_pred cchhhccCC----Cccccccccccch-----------hh-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcce
Confidence 211111000 0000001112222 22 4444 23445666555444 447888888888888999
Q ss_pred EeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHH
Q 043646 403 VLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRS 482 (625)
Q Consensus 403 v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~ 482 (625)
+..+. ..+.++|...+.. -..+.+..++++.-.|...+-.. +
T Consensus 398 ~~~~~---~lgLvcFRlk~~N--------------~~ne~Ll~~in~~g~i~l~~~~l------~--------------- 439 (511)
T KOG0628|consen 398 IVNKR---ILGLVCFRLKGDN--------------EINEALLNRLNSSGRIHLVPASL------H--------------- 439 (511)
T ss_pred eeccc---ccceeEEeecCCc--------------HHHHHHHHHHHhcCcEEEEEeee------c---------------
Confidence 98764 6888999886542 01345666666666666553211 0
Q ss_pred HHHhCCCCCCCcEEEEec-CCCCCHHHHHHHHHHHHHHHHhhhhc
Q 043646 483 AIQKGYLGVKPGWTRITF-PYYMSNEEFEFILAALEFIAAYGHRF 526 (625)
Q Consensus 483 ~~~~g~~g~~~g~iRis~-~~~~t~edid~ll~aL~~~~~~~~~~ 526 (625)
..-.+|+.+ ...++.+|+++..+.|.+.+.+..+.
T Consensus 440 ---------gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 440 ---------GKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred ---------ceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 236799998 47788999999999999988876544
No 222
>PLN02672 methionine S-methyltransferase
Probab=99.84 E-value=2e-18 Score=199.51 Aligned_cols=350 Identities=16% Similarity=0.123 Sum_probs=225.4
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC--CcEEEeCChHHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA--DAIIFCGAGTTAA 152 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~--~~vift~sGttaa 152 (625)
...+.|+.+... ++|+.+.+++.+.+... +. . ....+..+.+++++++.+|.+.+ ++|+++ +|++++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~--~~-s------~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt-~Gs~el 766 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQ--NI-S------ESETDPRPSILQFIKSNYGFPTDSCTEFVYG-DTSLAL 766 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhc--CC-C------CCChHHHHHHHHHHHHHhCcCCCCCCEEEEe-CCHHHH
Confidence 357888876554 56788999988766321 11 1 11234578899999999998754 367776 899999
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhh
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKA 230 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~ 230 (625)
+..++.++ +++||. |+++.+.|+.+...++..|++++.+|++. +..+|+++|+++++.
T Consensus 767 L~lll~aL---------------l~pGD~--VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~--- 826 (1082)
T PLN02672 767 FNKLVLCC---------------VQEGGT--LCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET--- 826 (1082)
T ss_pred HHHHHHHH---------------cCCCCE--EEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc---
Confidence 99888887 578986 99999999999989999999999999974 457899999999862
Q ss_pred CCCCeEEEEeccc-CccccccC---HHHHHHHHHHcCCEEEEeccCcCC-Cc--c---ccCCCC--CCCC-----CcEEE
Q 043646 231 AKRPMLGSFSACS-NVTGIYSD---TRSIARLLHQYGGFACFDFAASGP-YV--K---INLRSR--NIDG-----YDAIF 293 (625)
Q Consensus 231 ~~~~~lv~~~~~~-n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g-~~--~---id~~~~--~~~~-----~D~v~ 293 (625)
.+.+++++++|+ ||||.+.+ +++|+++|++||+++|+|++++.- +. + .++.+. ..+. .-+++
T Consensus 827 -~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL 905 (1082)
T PLN02672 827 -VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALL 905 (1082)
T ss_pred -CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEE
Confidence 134588899997 99999976 567888899999999999997621 11 1 111110 0001 12455
Q ss_pred EcCCCCCCCCC-CceEEEEecc-ccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHH
Q 043646 294 LATHKFLGGPG-TPGILLISKA-LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFW 370 (625)
Q Consensus 294 ~S~hK~lggp~-g~G~l~v~~~-~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~ 370 (625)
.|++|.++.|+ .+|++++++. +. +.+... .. . .+..+..+.. .+++++.
T Consensus 906 ~SfSKkf~lpGLRIGylIap~~eLi--~~l~~~------------------------~~-~-s~~~~~~q~Aaaaalall 957 (1082)
T PLN02672 906 GGLSTELLSGGHEFGFLALNDSVLI--DAFHSA------------------------PG-L-SRPHSTLKYTIKKLLGLK 957 (1082)
T ss_pred eCcHHhhccHHHHheeEEeCCHHHH--HHHHHh------------------------hh-h-cCCCcHHHHHHHHHHHHH
Confidence 69999888665 3899998655 42 111100 00 0 0111112221 2222221
Q ss_pred HHhh----cCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCcccccc---CCCCCChHHH
Q 043646 371 VKEY----IGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE---RNKPLHGPFV 443 (625)
Q Consensus 371 ~~~~----~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~---~~~~l~~~~v 443 (625)
..+. ......++..+..++++.+.|.+. ++++..+. ++.+.|...+......-+-... .+.+++..++
T Consensus 958 ~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~Pe----GGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~ef 1032 (1082)
T PLN02672 958 NQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQ----GGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNI 1032 (1082)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCC----cEEEEEEEccccccccccccccccccccCCCHHHH
Confidence 0000 012344455677788888999876 77776553 3455444321100000000000 0123567789
Q ss_pred HHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 444 ATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 444 ~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
++.|+++.||.+.+|.+|+ .++++||+++ .+++++++.++.|+++.
T Consensus 1033 ae~LLee~GVaV~PGs~FG-----------------------------~~g~~RIsfa--~~~e~LeeALerL~kf~ 1078 (1082)
T PLN02672 1033 REAILKSTGLCINSSSWTG-----------------------------IPGYCRFSFA--LEDSEFDRALKAIARFK 1078 (1082)
T ss_pred HHHHHHcCCEEEecCcccC-----------------------------CCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 9999887899999997654 2489999998 37889999999998754
No 223
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.84 E-value=3.3e-18 Score=184.65 Aligned_cols=203 Identities=17% Similarity=0.168 Sum_probs=148.8
Q ss_pred ceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHH
Q 043646 77 RLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRL 156 (625)
Q Consensus 77 ~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l 156 (625)
..+|+++.+.++.++.+.+++.+.+..+ .|... ....+. ....++.+++.+++++|++. .++| +||+.+ +..+
T Consensus 81 g~v~~tNlg~s~l~~~vieAv~~~~~~y-~~l~~-~l~~g~-~g~r~~~le~~lA~l~gae~--alvv-~sg~aA-i~l~ 153 (454)
T TIGR00474 81 GVVLHTNLGRAPLAEEAIEAVTDAARGY-SNLEY-DLETGK-RGSRYSHVEGLLCELTGAED--ALVV-NNNAAA-VLLA 153 (454)
T ss_pred CcEEeccCCCCCCCHHHHHHHHHHHhcc-cchhc-cccccc-cchHHHHHHHHHHHHhCCCc--EEEE-CCHHHH-HHHH
Confidence 4678888888899999999998888643 34321 111111 22446889999999999864 3555 466654 6655
Q ss_pred HHHhcccccchhhhhhhhccCCCCceEEEEcCCCCch----h--HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh
Q 043646 157 QEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHS----N--LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA 230 (625)
Q Consensus 157 ~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s----~--~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~ 230 (625)
+.. +.+|++ |+++..+|.. + ...++..|+++++++.+ +..++++++++|+
T Consensus 154 l~~----------------l~~Gde--VIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~---- 209 (454)
T TIGR00474 154 LNT----------------LAKGKE--VIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAIT---- 209 (454)
T ss_pred HHH----------------hCCcCE--EEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcC----
Confidence 544 367885 9998877632 1 22345679999999764 3458999999997
Q ss_pred CCCCeEEEEecccCcc--c--cccCHHHHHHHHHHcCCEEEEeccCcC---------CCccc--cCCCCCCCCCcEEEEc
Q 043646 231 AKRPMLGSFSACSNVT--G--IYSDTRSIARLLHQYGGFACFDFAASG---------PYVKI--NLRSRNIDGYDAIFLA 295 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~T--G--~~~~l~~I~~la~~~g~~vivD~A~~~---------g~~~i--d~~~~~~~~~D~v~~S 295 (625)
++|++|++.+++|++ | .+.|+++|+++||+||+++++|.+.+. ++.+. +...+ |+|++++|
T Consensus 210 -~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~---GaDiv~fS 285 (454)
T TIGR00474 210 -ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAA---GVDLVTFS 285 (454)
T ss_pred -cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHc---CCCEEEec
Confidence 689999999999984 6 478999999999999999999976321 22222 22223 89999999
Q ss_pred CCCCCCCCCCceEEEEeccc
Q 043646 296 THKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 296 ~hK~lggp~g~G~l~v~~~~ 315 (625)
+|||+|||. .|+++++++.
T Consensus 286 g~K~LgGp~-~G~i~g~~~~ 304 (454)
T TIGR00474 286 GDKLLGGPQ-AGIIVGKKEL 304 (454)
T ss_pred CccccCCCe-EEEEEECHHH
Confidence 999999997 5999999887
No 224
>PLN02242 methionine gamma-lyase
Probab=99.84 E-value=7.7e-19 Score=189.08 Aligned_cols=316 Identities=14% Similarity=0.072 Sum_probs=194.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+++++.+++++|... ++++++|+ +++..++.++ +++||+ |+++...|..+
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~~---~l~~~sG~-~Ai~~al~al---------------~~~GD~--Vl~~~~~Y~~~ 128 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTEA---AYCTASGM-SAISSVLLQL---------------CSSGGH--VVASNTLYGGT 128 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCe---EEEEccHH-HHHHHHHHHH---------------hCCCCE--EEEcCCcHHHH
Confidence 444445667889999999999863 45664555 5666666665 578986 88888887777
Q ss_pred HHHH-----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEe
Q 043646 195 LLSW-----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (625)
Q Consensus 195 ~~~~-----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD 269 (625)
...+ +..|++++.++.+ |+++++++++. +++++|++++++||||.+.|+++|+++||++|+++++|
T Consensus 129 ~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~~----~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD 199 (418)
T PLN02242 129 HALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVVP----GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD 199 (418)
T ss_pred HHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcCc----CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE
Confidence 5544 2368888777653 89999998872 25999999999999999999999999999999999999
Q ss_pred ccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 270 FAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 270 ~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
++++... .+...+ +.|+++.|++|++++++. .|+++.++++. ..+.....+
T Consensus 200 ea~~~~~--~~~~~~---g~divv~S~SK~l~g~g~~~gG~iv~~~~li--~~l~~~~~~-------------------- 252 (418)
T PLN02242 200 NTFAPMV--LSPARL---GADVVVHSISKFISGGADIIAGAVCGPAELV--NSMMDLHHG-------------------- 252 (418)
T ss_pred CCCCccC--CCHHHc---CCcEEEEeCccccCCCCCceEEEEEcCHHHH--HHHHHHhhh--------------------
Confidence 9986432 233333 689999999999987764 38888777662 222111000
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCC--C--------------CCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNT--S--------------VKR 411 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~--~--------------~~~ 411 (625)
.....|.+...+. +++... .....+.+.++..+.+.++.+.|.++ +++++.|. + ...
T Consensus 253 --~~~~~g~~~~~~~--A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~ 325 (418)
T PLN02242 253 --ALMLLGPTMNPKV--AFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGF 325 (418)
T ss_pred --hhhccCCCCCHHH--HHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCc
Confidence 0011122111111 111111 11123444556677899999999988 46777542 0 123
Q ss_pred cceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhc----CeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHH
Q 043646 412 QAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLF----GIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAI 484 (625)
Q Consensus 412 ~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~----gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~ 484 (625)
+++++|.+.... ....+.+.| +.+ .+.+.-|..... |.......++.+...
T Consensus 326 g~~~sf~l~~~~---------------~~~~f~~~l-~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~------ 383 (418)
T PLN02242 326 GGLLCLDMDTEE---------------RANRLMRYL-QNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKA------ 383 (418)
T ss_pred eeEEEEEECCHH---------------HHHHHHHHh-hcccccceeeecCCCCCceeeCCCccccccCCHHHHH------
Confidence 567888773210 122344444 212 334444443321 222222222221111
Q ss_pred HhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 485 QKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 485 ~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..|+.++.||||+|.-. |++.+++-|++.+..
T Consensus 384 ---~~gi~~~liRlsvGlE~---~~~dli~dl~~al~~ 415 (418)
T PLN02242 384 ---AAGISPGLVRMSVGYTG---TLEQRWSQFEKALSA 415 (418)
T ss_pred ---hcCCCCCeEEEEecCCC---CHHHHHHHHHHHHHH
Confidence 25677899999999631 356666666655543
No 225
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.9e-19 Score=189.37 Aligned_cols=237 Identities=12% Similarity=0.067 Sum_probs=165.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++......+.+++.|+++-|+.. .++|. | .++++..++.++ +++||. |+++...|...
T Consensus 56 YsR~~nPt~~~le~~la~LEg~~~--a~~~~-S-GmaAi~~~~~~l---------------l~~GD~--Vv~~~~~Yg~t 114 (395)
T PRK08114 56 YGRRGTLTHFSLQEAMCELEGGAG--CALYP-C-GAAAVANAILAF---------------VEQGDH--VLMTGTAYEPT 114 (395)
T ss_pred ccCCCChhHHHHHHHHHHHhCCCe--EEEEh-H-HHHHHHHHHHHH---------------cCCCCE--EEEeCCCcHHH
Confidence 333334456678899999988752 35553 5 455577666655 578995 88888888777
Q ss_pred HHHH----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC--CEEEE
Q 043646 195 LLSW----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG--GFACF 268 (625)
Q Consensus 195 ~~~~----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g--~~viv 268 (625)
...+ +..|+++.+++. .|.+.++++|+ ++|++|++++++||+|.+.|+++|+++||++| ++++|
T Consensus 115 ~~l~~~~l~~~Gi~v~~vd~-----~d~~~l~~~l~-----~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvV 184 (395)
T PRK08114 115 QDFCSKILSKLGVTTTWFDP-----LIGADIAKLIQ-----PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMI 184 (395)
T ss_pred HHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcC-----CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEE
Confidence 6554 446999999874 37889999997 68999999999999999999999999999984 99999
Q ss_pred eccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC--CceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 269 DFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG--TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 269 D~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~--g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
|.+++.|+. +++.++ |+|+++.|.|||++|+. +.|+++.+++.. ..+.
T Consensus 185 DnT~a~p~~-~~pl~~---GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~--~~l~------------------------ 234 (395)
T PRK08114 185 DNTWAAGVL-FKALDF---GIDISIQAGTKYLVGHSDAMIGTAVANARCW--EQLR------------------------ 234 (395)
T ss_pred ECCCccccc-cCHHHc---CCcEEEEcCcccccCCCcceeEEEEcCHHHH--HHHH------------------------
Confidence 999999887 777777 99999999999999996 467776665441 1110
Q ss_pred chhhhhcCCC-hhHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CC
Q 043646 347 DIEERENGGT-PQIVQMIRAALAFWV-KEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VK 410 (625)
Q Consensus 347 ~~~~~~~~gt-~~~~~~~~aal~~~~-~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~ 410 (625)
..+...|. .+... +|++ ....-...+.++..+.+..+.++|++.|.++ |+.|.- ..
T Consensus 235 --~~~~~~G~~~~p~~------a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g 306 (395)
T PRK08114 235 --ENSYLMGQMVDADT------AYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTG 306 (395)
T ss_pred --HHHHhccCCCCHHH------HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCC
Confidence 00111122 11111 1111 1112234445566677899999999998874 554420 12
Q ss_pred CcceEEEEec
Q 043646 411 RQAILSFLVY 420 (625)
Q Consensus 411 ~~~i~~f~~~ 420 (625)
.+++++|.+.
T Consensus 307 ~gg~~sf~l~ 316 (395)
T PRK08114 307 SSGLFSFVLK 316 (395)
T ss_pred CceEEEEEec
Confidence 4678888874
No 226
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.84 E-value=4.3e-19 Score=189.13 Aligned_cols=160 Identities=17% Similarity=0.222 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH
Q 043646 119 MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW 198 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (625)
.......+++.++++.|.+. .+++ +||+. ++..++.. +++||+ |++++..|++....+
T Consensus 48 ~~p~~~~Le~~la~l~g~~~--al~~-~SG~~-Al~~~l~~----------------l~pGd~--Vi~~~~~y~~t~~~~ 105 (380)
T PRK06176 48 GNPTRFALEELIADLEGGVK--GFAF-ASGLA-GIHAVFSL----------------FQSGDH--VLLGDDVYGGTFRLF 105 (380)
T ss_pred CChhHHHHHHHHHHHhCCCC--EEEE-CCHHH-HHHHHHHH----------------cCCCCE--EEEcCCChhHHHHHH
Confidence 33446779999999999753 4555 58876 56655543 478886 888888887765444
Q ss_pred ----HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 199 ----RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 199 ----~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
...|++++.++.. |+++++++++ +++++|++++|+||||.+.|+++|+++||++|+++++|++++.
T Consensus 106 ~~~~~~~gi~v~~vd~~-----d~e~l~~ai~-----~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~ 175 (380)
T PRK06176 106 DKVLVKNGLSCTIIDTS-----DLSQIKKAIK-----PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT 175 (380)
T ss_pred HHHHHhcCeEEEEcCCC-----CHHHHHHhcC-----cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 3468888888753 8999999887 5899999999999999999999999999999999999999887
Q ss_pred CCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEecc
Q 043646 275 PYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKA 314 (625)
Q Consensus 275 g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~ 314 (625)
++....+ .+ ++|++++|++|+++||.. .|+++.++.
T Consensus 176 ~~~~~p~-~~---gaDivv~S~tK~l~g~~d~~gG~vv~~~~ 213 (380)
T PRK06176 176 PYYQNPL-LL---GADIVVHSGTKYLGGHSDVVAGLVTTNNE 213 (380)
T ss_pred cccCCcc-cc---CCCEEEecCceeccCCccceeeEEEecHH
Confidence 6554333 23 889999999999998863 466666543
No 227
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.84 E-value=9.7e-19 Score=185.80 Aligned_cols=309 Identities=14% Similarity=0.040 Sum_probs=192.4
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHHHHHHHHHHhccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG---GGQADAIIFCGAGTTAAIKRLQEVMGIT 163 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g---~~~~~~vift~sGttaal~~l~~~l~~~ 163 (625)
.+.++.+.+++.+.... .. |....+..++.+++.+++.+.+| .+++ +|++| +|++.++..+..++.
T Consensus 33 ~~~~~~~~~~~~~~~~~-~~------Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~I~it-~G~~~~i~~~~~~l~-- 101 (357)
T TIGR03539 33 DPVPPLIRAALAAAADA-PG------YPQTWGTPELREAIVDWLERRRGVPGLDPT-AVLPV-IGTKELVAWLPTLLG-- 101 (357)
T ss_pred CCCCHHHHHHHHHHHhh-CC------CCcccCCHHHHHHHHHHHHHhcCCCCCCcC-eEEEc-cChHHHHHHHHHHHc--
Confidence 34456777777654321 11 11112235566667777766655 4455 89888 899999988877652
Q ss_pred ccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEeccc
Q 043646 164 VPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACS 243 (625)
Q Consensus 164 ~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~ 243 (625)
+++||. |+++.+.|+.+....+..|++++.++ +++.+ .. +++++|++++++
T Consensus 102 ------------~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~----~~~~~v~~~~p~ 152 (357)
T TIGR03539 102 ------------LGPGDT--VVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DP----VGPDLIWLNSPG 152 (357)
T ss_pred ------------CCCCCE--EEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----Cc----cCccEEEEeCCC
Confidence 478885 99999999999877888899887764 23322 21 478999999999
Q ss_pred CccccccC---HHHHHHHHHHcCCEEEEeccCcC-CCccccCCCCCC------CCCcEEEEcCCCCCCCCCC-ceEEEEe
Q 043646 244 NVTGIYSD---TRSIARLLHQYGGFACFDFAASG-PYVKINLRSRNI------DGYDAIFLATHKFLGGPGT-PGILLIS 312 (625)
Q Consensus 244 n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~-g~~~id~~~~~~------~~~D~v~~S~hK~lggp~g-~G~l~v~ 312 (625)
||||.+.+ +++|+++|++||+++++|++++. .+....+..+.. ..-.+++.|++|.++.|+- +|+++++
T Consensus 153 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~ 232 (357)
T TIGR03539 153 NPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGD 232 (357)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecC
Confidence 99999987 56789999999999999999752 111111111100 0123677799999876653 7999887
Q ss_pred ccccccCCCCCcccCCceEEeeccccccccccccchhhhhc-CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Q 043646 313 KALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN-GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESA 391 (625)
Q Consensus 313 ~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l 391 (625)
+++.. .+... .... .+.+.+.+. ++.+++ ......+.++.+..+.++++
T Consensus 233 ~~~~~--~~~~~-------------------------~~~~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~~~~~~~~~~ 282 (357)
T TIGR03539 233 PALVA--ELLTV-------------------------RKHAGLMVPAPVQA--AMVAAL-GDDGHVAEQKARYAARRAQL 282 (357)
T ss_pred HHHHH--HHHHH-------------------------HhhcccCCCHHHHH--HHHHHc-CCHHHHHHHHHHHHHHHHHH
Confidence 77621 11100 0000 111222221 112222 12122345556666677788
Q ss_pred HHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhc
Q 043646 392 LGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLA 471 (625)
Q Consensus 392 ~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~ 471 (625)
.+.|.+. ++.+..+ .++++.+...+. +..++.+.|. ++||.+++|..++..
T Consensus 283 ~~~L~~~-g~~~~~p----~~~~~~~~~~~~----------------~~~~~~~~l~-~~gV~v~pg~~f~~~------- 333 (357)
T TIGR03539 283 KPALEKA-GFRIDHS----EAGLYLWATRGE----------------DAWDTVDRLA-ELGILVAPGDFYGPA------- 333 (357)
T ss_pred HHHHHHc-CCCCcCC----CccEEEEEECCC----------------CHHHHHHHHH-hCCEEECCccccCCC-------
Confidence 8888775 6665444 345555554321 2456777774 579999988765311
Q ss_pred CChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 043646 472 FDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516 (625)
Q Consensus 472 ~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL 516 (625)
.++++||+++. ++++++..++.|
T Consensus 334 --------------------~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 334 --------------------GSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred --------------------CCCeEEEEecC--CHHHHHHHHHhh
Confidence 14799999974 678888888765
No 228
>PRK07505 hypothetical protein; Provisional
Probab=99.84 E-value=2e-18 Score=186.41 Aligned_cols=348 Identities=15% Similarity=0.095 Sum_probs=202.1
Q ss_pred CccccCCCCCCceEeccCCCCCc----chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCc
Q 043646 66 DVEFDYSFGKRRLTYADHTASGR----SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADA 141 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~~~----~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~ 141 (625)
+..+++.-| ..|+|.++... .++.|.+++.+++..+ ++.+...+ .+....+...++++.|+++++. . .
T Consensus 37 G~~~~d~~g---~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~-g~~~~~~~-~~~~~~~~~~~l~~~la~~~~~--~-~ 108 (402)
T PRK07505 37 GILITLADG---HTFVNFVSCSYLGLDTHPAIIEGAVDALKRT-GSLHLSSS-RTRVRSQILKDLEEALSELFGA--S-V 108 (402)
T ss_pred CccEEecCC---ceEEEeecCCccCCCCCHHHHHHHHHHHHHh-CCCCCCcc-chhhhhHHHHHHHHHHHHHhCC--C-E
Confidence 344555544 34788755443 3789999999988643 32222111 1123466789999999999987 3 5
Q ss_pred EEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH--HHHHHcCCeEEEEecCCCCCCCHH
Q 043646 142 IIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL--LSWRQSLAEVVEIGLDDNGLLDIE 219 (625)
Q Consensus 142 vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~--~~~~~~G~~vv~v~~~~~~~ld~~ 219 (625)
++++ +|++++...+-.+.. . .+.+++..+|+....+|.++. ..+...+.+++.+|.+ |++
T Consensus 109 ~~~~-sG~~a~~~ai~~~~~-~-----------~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d~~ 170 (402)
T PRK07505 109 LTFT-SCSAAHLGILPLLAS-G-----------HLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN-----DLD 170 (402)
T ss_pred EEEC-ChHHHHHHHHHHHHh-c-----------ccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----CHH
Confidence 6676 788875444422110 0 012233335666678888764 2344456788888753 899
Q ss_pred HHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC-Ccc----ccCCCCC--CCCCcEE
Q 043646 220 ALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP-YVK----INLRSRN--IDGYDAI 292 (625)
Q Consensus 220 ~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g-~~~----id~~~~~--~~~~D~v 292 (625)
+|+++++ +++++++++.++|+||.+.|+++|.++|++||+++|+|++|+.+ +.+ ....... .....++
T Consensus 171 ~l~~~~~-----~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~ 245 (402)
T PRK07505 171 ALEDICK-----TNKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTII 245 (402)
T ss_pred HHHHHHh-----cCCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEE
Confidence 9999886 46789999999999999999999999999999999999998642 111 1111111 1122466
Q ss_pred EEcCCCCCCCCCCceEEEE-eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHH
Q 043646 293 FLATHKFLGGPGTPGILLI-SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAF 369 (625)
Q Consensus 293 ~~S~hK~lggp~g~G~l~v-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~ 369 (625)
+.|+.|.+++++ |++++ ++++. +.+..... ..+ ..++++..+.. .++++.
T Consensus 246 ~~s~sK~~~~~G--g~~~~~~~~~~--~~~~~~~~-~~t----------------------~~~~~~~~a~aa~~a~l~~ 298 (402)
T PRK07505 246 AASLGKAFGASG--GVIMLGDAEQI--ELILRYAG-PLA----------------------FSQSLNVAALGAILASAEI 298 (402)
T ss_pred EEechhhhhccC--eEEEeCCHHHH--HHHHHhCC-Cce----------------------eCCCCCHHHHHHHHHHHHH
Confidence 678999998553 67665 44442 11111000 000 11333333332 233333
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhh
Q 043646 370 WVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFND 449 (625)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 449 (625)
. .........++.++..+.+...+.. +......++..+.+... .....+.+.|.+
T Consensus 299 ~--~~~~~~~~~~~l~~~~~~~~~~~~~--------~~~g~~~~i~~~~~~~~---------------~~~~~~~~~l~~ 353 (402)
T PRK07505 299 H--LSEELDQLQQKLQNNIALFDSLIPT--------EQSGSFLPIRLIYIGDE---------------DTAIKAAKQLLD 353 (402)
T ss_pred H--hccCcHHHHHHHHHHHHHHHHHHHh--------cCCCCCCCEEEEEeCCH---------------HHHHHHHHHHHH
Confidence 2 2222233333333333333222211 00011223322222110 013568888865
Q ss_pred hcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 450 LFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 450 ~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.||.+++...+..+. .+.++||+++..+|++|+++++++|++++.++
T Consensus 354 -~Gi~v~~~~~p~~~~--------------------------~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~~ 400 (402)
T PRK07505 354 -RGFYTSPVFFPVVAK--------------------------GRAGLRIMFRASHTNDEIKRLCSLLKEILDEG 400 (402)
T ss_pred -CCCeEeeecCCCCCC--------------------------CCceEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 699998653221110 13689999999999999999999999988765
No 229
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.5e-17 Score=166.34 Aligned_cols=350 Identities=12% Similarity=0.012 Sum_probs=234.1
Q ss_pred ceEeccCCC-----CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC-----CCCcEEEeC
Q 043646 77 RLTYADHTA-----SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG-----QADAIIFCG 146 (625)
Q Consensus 77 ~~~Yld~~~-----~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~-----~~~~vift~ 146 (625)
.++-|-++- ..+..+.+++|+.+.++.--+|. |..+ .-...+|+++|++++.+ ..+.|++|
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~----Yaps----~G~~~AR~AVAeYl~~~l~~kl~a~DV~lt- 132 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNG----YAPS----VGILPARRAVAEYLNRDLPNKLTADDVVLT- 132 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCC----cCCc----cccHHHHHHHHHHhhcCCCCccCcCceEEe-
Confidence 455555432 23456788899988886432332 1111 22455888888886654 22378998
Q ss_pred ChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHH
Q 043646 147 AGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQ 224 (625)
Q Consensus 147 sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~ 224 (625)
+|.+++|..++.++. +||.. |+++.+.++-+..-.+-.|.+|+.+.+-+ ++.+|++.++++
T Consensus 133 sGC~qAIe~~i~~LA---------------~p~aN--ILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal 195 (447)
T KOG0259|consen 133 SGCSQAIELAISSLA---------------NPGAN--ILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEAL 195 (447)
T ss_pred ccchHHHHHHHHHhc---------------CCCCc--eecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHh
Confidence 899999999999883 68875 99999999988766777899999998743 679999999999
Q ss_pred HHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCc---CC-CccccCCCCCCCCCcEEEEcCC
Q 043646 225 LELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAAS---GP-YVKINLRSRNIDGYDAIFLATH 297 (625)
Q Consensus 225 l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~---~g-~~~id~~~~~~~~~D~v~~S~h 297 (625)
++ ++|.++++.+|+||+|.++. +++|+++|+++|+++|.|+++. +| .-.+.|..+...-+-+.+.+..
T Consensus 196 ~D-----ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggis 270 (447)
T KOG0259|consen 196 AD-----ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGIS 270 (447)
T ss_pred hc-----cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccc
Confidence 98 68999999999999999966 8899999999999999999954 11 2223344332212233345678
Q ss_pred CCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh--
Q 043646 298 KFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY-- 374 (625)
Q Consensus 298 K~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~-- 374 (625)
|-.-.|+ .+|++++++..-.+.. +..... ...+-.-++....++++|+--++.+.
T Consensus 271 KrW~VPGWRlGWi~~hD~~gvf~~---------------------~~~~q~-~~~~~~~~~~p~TiiQ~AlP~IL~kTp~ 328 (447)
T KOG0259|consen 271 KRWIVPGWRLGWIALHDPRGVFRD---------------------TKVVQG-IKNFLDIIPGPATIIQGALPDILEKTPE 328 (447)
T ss_pred cccccCCceeeeEEEecccccccc---------------------hHHHHH-HHHHHhccCCccHhHHHHhHHHHHhChH
Confidence 8776676 4899999876411110 000000 11122223344445555555444221
Q ss_pred cCHHHHHHHHHHHHHHHHHhhCCCCcEEE-eCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCe
Q 043646 375 IGYEVIKKQEDVYIESALGRILPNQNIQV-LGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGI 453 (625)
Q Consensus 375 ~g~~~i~~~~~~l~~~l~~~L~~l~gv~v-~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI 453 (625)
...+....-.+..++..+++|+++|++.. ..|. +..+.+.-..-. .+ ...-+..+++..|.++..+
T Consensus 329 efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPe----g~mylmv~l~~s--~~-------~~~~dD~dFc~kL~~Eesv 395 (447)
T KOG0259|consen 329 EFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPE----GCMYLMVKLNLS--LF-------PDIEDDVDFCQKLAREESV 395 (447)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCC----cceEEEeccchh--hh-------ccccccHHHHHHHhhhcce
Confidence 23445566777789999999999999984 3443 233332221100 00 0001234788888888999
Q ss_pred eeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 454 QARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 454 ~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.+-+|.+++ .++|+|++++ ...+.++..++.|++++...
T Consensus 396 ~~LPG~af~-----------------------------~~nw~Ri~i~--~~~~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 396 ICLPGQAFG-----------------------------LKNWLRIVIT--VEEEMLEEAFSRIKEFCDRH 434 (447)
T ss_pred EEecccccc-----------------------------CCCeEEEEEc--cChHHHHHHHHHHHHHHHhh
Confidence 999998876 3699999997 46789999999999887553
No 230
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=1.1e-18 Score=188.79 Aligned_cols=156 Identities=18% Similarity=0.214 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH----
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS---- 197 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~---- 197 (625)
....+++.++++.|.+. .+++++|+.+ +..++.++ +++||+ |+++...|.+....
T Consensus 64 ~~~~le~~lA~l~g~~~---al~~~SG~~A-i~~al~al---------------l~pGd~--VIv~~~~y~~t~~~~~~~ 122 (427)
T PRK05994 64 TNAVLEERVAALEGGTA---ALAVASGHAA-QFLVFHTL---------------LQPGDE--FIAARKLYGGSINQFGHA 122 (427)
T ss_pred cHHHHHHHHHHHhCCCc---EEEEcCHHHH-HHHHHHHH---------------hCCCCE--EEEecCcchhHHHHHHHH
Confidence 45678999999999863 3444466665 55555554 478886 88888888876544
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~ 277 (625)
+...|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|+++||++|+++++|++++.++.
T Consensus 123 ~~~~G~~v~~vd~~-----d~~~l~~ai~-----~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~ 192 (427)
T PRK05994 123 FKSFGWQVRWADAD-----DPASFERAIT-----PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL 192 (427)
T ss_pred HHhcCcEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc
Confidence 34579999988754 7899999987 5899999999999999999999999999999999999999987765
Q ss_pred cccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEe
Q 043646 278 KINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLIS 312 (625)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~ 312 (625)
...+ .+ ++|+++.|+||++|++++ +|.+++.
T Consensus 193 ~~pl-~~---gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 193 IRPI-EH---GADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred CCcc-cc---CCcEEEEcCccccCCCCCcEEEEEEe
Confidence 4333 23 899999999999998875 5666664
No 231
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.83 E-value=3.7e-18 Score=173.67 Aligned_cols=336 Identities=20% Similarity=0.187 Sum_probs=218.2
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeC-ChHHH---HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCC
Q 043646 116 GQRMTKMVHEASNYIKRCLGGGQADAIIFCG-AGTTA---AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEH 191 (625)
Q Consensus 116 ~~~~~~~~~~~~~~ia~~~g~~~~~~vift~-sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h 191 (625)
..+..+++.++++|+++..|.+ .|.+.. +|+.. +|..+ +..- + .-..+.|.+|++++..|
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~D---avsLQP~AGAqGE~aGll~I-r~YH--------e----~rG~~~R~~~LIP~SAH 167 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMD---AVSLQPNAGAQGEYAGLLAI-RAYH--------E----SRGEGHRNICLIPDSAH 167 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCc---eeeccCCCCcchhhHHHHHH-HHHH--------H----HcCCCcCcEEEeecccc
Confidence 4567889999999999999986 444543 34443 33222 1110 0 01244567899999999
Q ss_pred chhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc-cCHHHHHHHHHHcCCEEEEec
Q 043646 192 HSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY-SDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 192 ~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~-~~l~~I~~la~~~g~~vivD~ 270 (625)
..|-.+....|.+|+.|+.+++|.+|+++|++++. +++.++.+++|++ .|.+ .++.+|+++.|++|..|..|+
T Consensus 168 GTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~-----~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DG 241 (496)
T COG1003 168 GTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAE-----DNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDG 241 (496)
T ss_pred CCChhhHhhcCceEEEEecCCCCCccHHHHHHHhc-----cceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999999999999999998 6899999999864 5777 669999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC-----CceEEEEeccccccCCCCCcccCCceEEeeccccccccccc
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG-----TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYL 345 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~-----g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (625)
|..-+.+.+ .++..+ |.|++-++.||.|..|. |.|-+.|++.+. |+.++.........+..+.....
T Consensus 242 ANlNA~vG~-~rPGd~-G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~------pfLP~p~~~~~~~~y~~~~~~~~ 313 (496)
T COG1003 242 ANLNAIVGL-ARPGDM-GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLA------PFLPGPVVYHDVGEYRLDYDGKK 313 (496)
T ss_pred cchhhhhcc-cccccc-ccceEEeecccccccCCCCCCCCCCceehHhhcc------ccCCCCcccCCCccccccCCCCc
Confidence 965433322 111111 89999999999995552 367788887762 22222110000000000000000
Q ss_pred cchhhhhcCCChhHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCC
Q 043646 346 EDIEERENGGTPQIVQMIRAALAFWV-KEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN 424 (625)
Q Consensus 346 ~~~~~~~~~gt~~~~~~~~aal~~~~-~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~ 424 (625)
......--.|..+++-+ +..++. ....|.....+....+++|+.++|+. .+.+.-.. ..+..+-+..-..+
T Consensus 314 s~g~~~a~~Gs~~il~~---a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~-~~~~~HE~ild~r~-- 385 (496)
T COG1003 314 SIGVSAAPYGSASILPI---AWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTG-ENRVAHECILDARP-- 385 (496)
T ss_pred cceeeccccCcchHHHH---HHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCC-CCcceeEEEeechH--
Confidence 00000111233333332 223331 13445666667777789999999986 34443221 11222222221111
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
..+.+++...+|+++|+| +|+...+-.++- - -.+.+-|-+.-.-
T Consensus 386 -------l~~~~Gv~~~DvAKrLlD-~GfHaPT~~FPl--------i--------------------V~~tLMIEPTEsE 429 (496)
T COG1003 386 -------LKKETGVRALDVAKRLLD-YGFHAPTMYFPL--------I--------------------VAGTLMIEPTESE 429 (496)
T ss_pred -------hHhhcCCcHHHHHHHHHh-cCCCCCcccCcc--------c--------------------cccceeecCCCCC
Confidence 134567889999999988 899987655531 1 1478899998889
Q ss_pred CHHHHHHHHHHHHHHHHhhhh
Q 043646 505 SNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 505 t~edid~ll~aL~~~~~~~~~ 525 (625)
+.+++|++++++.++..+..+
T Consensus 430 sk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 430 SKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988654
No 232
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=3.1e-18 Score=180.10 Aligned_cols=308 Identities=15% Similarity=0.077 Sum_probs=198.6
Q ss_pred CceEeccCCCCC-cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhC---CCCCCcEEEeCChHHH
Q 043646 76 RRLTYADHTASG-RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLG---GGQADAIIFCGAGTTA 151 (625)
Q Consensus 76 ~~~~Yld~~~~~-~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g---~~~~~~vift~sGtta 151 (625)
...+.|+.+... ++|+.+.+++.+.+... ....|. .. ...++|+.++++++ .+++ +|++| +|+++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~----~~~~Y~-~~----~~~~Lr~aia~~~~~~~~~~~-~i~it-~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSD----TLRIYY-DS----PDEELIEKILSYLDTDFLSKN-NVSVG-NGADE 87 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhh----hhhcCC-CC----ChHHHHHHHHHHhCCCCCCcc-eEEEc-CCHHH
Confidence 456777765544 45678888887765320 000011 11 14457888888887 5555 88888 89999
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhC
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAA 231 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~ 231 (625)
+|..++.++ ++ |++..++|+.+...++..|++++.+|++.++.++... +
T Consensus 88 ~i~~~~~~~-------------------d~--v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~------ 136 (335)
T PRK14808 88 IIYVMMLMF-------------------DR--SVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V------ 136 (335)
T ss_pred HHHHHHHHh-------------------Cc--EEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c------
Confidence 999988764 23 8888999999998899999999999998776555321 2
Q ss_pred CCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC--cccc-CCCCCCCCCcEEEEcCCCCCCCCC-Cce
Q 043646 232 KRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY--VKIN-LRSRNIDGYDAIFLATHKFLGGPG-TPG 307 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~--~~id-~~~~~~~~~D~v~~S~hK~lggp~-g~G 307 (625)
.+++++++++|+||||.+.+.+++.+++ ++++++++|+++.--. .... +... .--+++.|++|.++.|+ .+|
T Consensus 137 ~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~---~~vi~~~S~SK~~~l~GlRvG 212 (335)
T PRK14808 137 GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKY---ENLAVIRTFSKAFSLAAQRIG 212 (335)
T ss_pred cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhC---CCEEEEEechhhccCcccceE
Confidence 2468999999999999999999999998 5899999999964211 1111 1111 12366679999998554 489
Q ss_pred EEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 043646 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVY 387 (625)
Q Consensus 308 ~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (625)
+++.++++. +.+.... ...+.+.+.+.+ ....+......+...+.....
T Consensus 213 ~~v~~~~~~--~~l~~~~--------------------------~~~~~~~~~q~a---~~~~l~~~~~~~~~~~~~~~~ 261 (335)
T PRK14808 213 YVVSSEKFI--DAYNRVR--------------------------LPFNVSYVSQMF---AKVALDHREIFEERTKFIVEE 261 (335)
T ss_pred EEEeCHHHH--HHHHHhc--------------------------CCCCCCHHHHHH---HHHHHhCHHHHHHHHHHHHHH
Confidence 999988773 2221100 001122222211 111111111123333444455
Q ss_pred HHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhH
Q 043646 388 IESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGH 467 (625)
Q Consensus 388 ~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~ 467 (625)
++++.+.|.++ ++++..+. ++.+ +...+.. +..++.+.|.+ +||.++. |
T Consensus 262 r~~l~~~L~~~-g~~~~~~~----g~f~-~~~l~~~---------------~~~~~~~~l~~-~Gi~V~~---~------ 310 (335)
T PRK14808 262 RERMKSALREM-GYRITDSR----GNFV-FIFMEKE---------------EKERLLEHLRA-KNIAVRS---F------ 310 (335)
T ss_pred HHHHHHHHHHC-CCEECCCC----CeEE-EEeCCCc---------------cHHHHHHHHHH-CCeEEEE---C------
Confidence 67788888776 67766542 3333 4333321 24578888754 7999983 2
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..++|||++ +.+++++++++|+++
T Consensus 311 -------------------------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 311 -------------------------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred -------------------------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 156999998 889999999999753
No 233
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=2e-18 Score=181.89 Aligned_cols=274 Identities=17% Similarity=0.136 Sum_probs=180.1
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC
Q 043646 124 HEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA 203 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (625)
.++++++++++|..+.++|++| +|++++|..+... +++|+ |++..+.|+.+...++..|+
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~-~Gs~e~i~~l~~~----------------~~~g~---v~v~~P~y~~y~~~~~~~g~ 115 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPV-AGSQAAIRALPAL----------------LPRGR---VGIAPLAYSEYAPAFARHGH 115 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEEC-cCHHHHHHHHHHh----------------cCCCe---EEEcCCCcHHHHHHHHHCCC
Confidence 5689999999999754488887 8999999877543 35654 77788899999888999999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHH---HHHcCCEEEEeccCcCCCcccc
Q 043646 204 EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARL---LHQYGGFACFDFAASGPYVKIN 280 (625)
Q Consensus 204 ~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~l---a~~~g~~vivD~A~~~g~~~id 280 (625)
+++.++.+. + .+. ..++++++++|+||||.+.+.+++.++ |.+++.++++|+++.-......
T Consensus 116 ~~~~v~~~~------~----~~~-----~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s 180 (339)
T PRK06959 116 RVVPLDEAA------D----TLP-----AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAAS 180 (339)
T ss_pred EEEeecccc------h----hcc-----ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCccc
Confidence 999888653 1 122 246789999999999999887776665 5578999999999663221112
Q ss_pred CCCCCCCCC-cEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChh
Q 043646 281 LRSRNIDGY-DAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358 (625)
Q Consensus 281 ~~~~~~~~~-D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~ 358 (625)
+.... +.. -+++.|++|.||.|+ .+|+++.++++. +.+..... ..+...
T Consensus 181 ~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li--~~l~~~~~--------------------------~~~vs~ 231 (339)
T PRK06959 181 LAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALL--AALRDALG--------------------------AWTVSG 231 (339)
T ss_pred chhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHH--HHHHHhcC--------------------------CCCCcH
Confidence 22211 111 266779999998564 489999988773 22211000 001111
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 359 IVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 359 ~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
+ .+.+...++.+..-.+..+++.+..++++.+.|+++ ++++.. .+++.+.-.+
T Consensus 232 ~---~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~------~~~f~~~~~~----------------- 284 (339)
T PRK06959 232 P---ARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVHA------TPLFSWTDDP----------------- 284 (339)
T ss_pred H---HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCccC------cceEEEEeCC-----------------
Confidence 1 122222222222223455677777788899999886 665531 1334333222
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
+..++.+.|.+ +||.++. |. .++++||+++ .+++|+++++++|++
T Consensus 285 ~~~~l~~~l~~-~GI~vr~---~~-----------------------------~~~~lRisi~--~~~~e~~~l~~al~~ 329 (339)
T PRK06959 285 RAAALHAALAR-RGIWTRY---FA-----------------------------PPPSVRFGLP--ADEAEWQRLEDALAE 329 (339)
T ss_pred CHHHHHHHHHh-CCeEEEE---CC-----------------------------CCCeEEEECC--CCHHHHHHHHHHHHH
Confidence 14578888865 7999982 32 1378999983 277999999999998
Q ss_pred HHHhh
Q 043646 519 IAAYG 523 (625)
Q Consensus 519 ~~~~~ 523 (625)
+....
T Consensus 330 ~~~~~ 334 (339)
T PRK06959 330 CVPTL 334 (339)
T ss_pred HHHHH
Confidence 87654
No 234
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.83 E-value=6.2e-19 Score=187.30 Aligned_cols=292 Identities=14% Similarity=0.054 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH---
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW--- 198 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~--- 198 (625)
...++++.++++. ..+ .+++ ++|+. ++..++.++ +++||+ |+++...|+.....+
T Consensus 52 ~~~~Le~~lA~l~--~~~-~v~~-~sG~~-Ai~~~l~al---------------l~~Gd~--Vl~~~~~y~~~~~~~~~~ 109 (366)
T PRK07582 52 TWRALEAALGELE--GAE-ALVF-PSGMA-AITAVLRAL---------------LRPGDT--VVVPADGYYQVRALAREY 109 (366)
T ss_pred cHHHHHHHHHHHc--CCC-EEEE-CCHHH-HHHHHHHHh---------------cCCCCE--EEEeCCCcHhHHHHHHHH
Confidence 4567888999998 223 4555 47775 677776665 578886 888777776654332
Q ss_pred -HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcC--C
Q 043646 199 -RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASG--P 275 (625)
Q Consensus 199 -~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~--g 275 (625)
...|++++.++.++.+ + .+. +++++|++++++||||.+.|+++|+++||++|+++++|++++. +
T Consensus 110 l~~~G~~v~~v~~~~~~-------~-~~~-----~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~ 176 (366)
T PRK07582 110 LAPLGVTVREAPTAGMA-------E-AAL-----AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLG 176 (366)
T ss_pred HhcCeEEEEEECCCChH-------H-Hhc-----cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccc
Confidence 3469999999875321 1 222 4789999999999999999999999999999999999999753 3
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
..+++ + ++|+++.|+|||++|+.| .|+++++++.. .+.+.. .....
T Consensus 177 ~~p~~---~---g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l-~~~l~~-------------------------~~~~~ 224 (366)
T PRK07582 177 QRPLE---L---GADLVVASDTKALTGHSDLLLGYVAGRDPEL-MAAVER-------------------------WRLLA 224 (366)
T ss_pred cCchh---c---CCcEEEecccccccCCCCeeEEEEEcCcHHH-HHHHHH-------------------------HHHHh
Confidence 33443 2 789999999999998877 58888753321 111110 01111
Q ss_pred CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCC---CC----------CCcceEEEEe
Q 043646 354 GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNT---SV----------KRQAILSFLV 419 (625)
Q Consensus 354 ~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~---~~----------~~~~i~~f~~ 419 (625)
..+++..... +... .....+.+.++..+++..+.++|.+.|.+. |..|. .. ..+++++|.+
T Consensus 225 g~~~~~~~a~---l~~r--~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~ 299 (366)
T PRK07582 225 GAIPGPFEAW---LAHR--SLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFEL 299 (366)
T ss_pred CCCCCHHHHH---HHHh--ccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEe
Confidence 1222222211 1110 111233444666678889999999888874 44221 11 2578999988
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
. + ...+.+.+ +..++... +...++. +.+.. .... . ..+++++.||+|
T Consensus 300 ~-~-----------------~~~~~~~~-~~l~~~~~-~~s~G~~--~sl~~---------~~~~-~-~~~~~~~liR~s 346 (366)
T PRK07582 300 A-D-----------------AAAAERFV-AASRLVVA-ATSFGGV--HTSAD---------RRAR-W-GDAVPEGFVRLS 346 (366)
T ss_pred C-C-----------------HHHHHHHH-HhCCccee-cccCCCc--cchhh---------hHHH-c-CCCCCCCeEEEE
Confidence 4 1 33555555 33455443 2222210 01100 0000 0 123567899999
Q ss_pred cCCCCCHHHHHHHHHHHHH
Q 043646 500 FPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~ 518 (625)
+|+.+.++.++.|.++|+.
T Consensus 347 vGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 347 CGIEDTDDLVADLERALDA 365 (366)
T ss_pred eccCCHHHHHHHHHHHHhh
Confidence 9999888888888888864
No 235
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=7.8e-19 Score=176.84 Aligned_cols=322 Identities=12% Similarity=0.067 Sum_probs=209.7
Q ss_pred CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccccc
Q 043646 86 SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVP 165 (625)
Q Consensus 86 ~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~ 165 (625)
.+.+.+.+.+++.+.-. -+. ..++..+...++++++++++|. . .++|+.+||.++...|...
T Consensus 9 ~~g~~~~m~eam~~a~~-----~~~----~~YG~D~~~~~~e~~~ae~~g~--~-a~~Fv~sGT~aN~lal~~~------ 70 (342)
T COG2008 9 VAGPTPEMREALAAANA-----VGD----DVYGEDPTTNALEQRIAELFGK--E-AALFVPSGTQANQLALAAH------ 70 (342)
T ss_pred cCCCCHHHHHHHHhccc-----cCC----CCCCCCHHHHHHHHHHHHHhCC--c-eEEEecCccHHHHHHHHHh------
Confidence 34445577888765321 111 2234566788899999999998 3 6888889999977776554
Q ss_pred chhhhhhhhccCCCCceEEEEcCCCCchhHHH--HHHc-CCeEEEEecCCCCCCCHHHHHHHHHHhh-hCCCCeEEEEec
Q 043646 166 SIMRDKLITSLRDEERWVVFLGPYEHHSNLLS--WRQS-LAEVVEIGLDDNGLLDIEALRSQLELYK-AAKRPMLGSFSA 241 (625)
Q Consensus 166 ~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--~~~~-G~~vv~v~~~~~~~ld~~~L~~~l~~~~-~~~~~~lv~~~~ 241 (625)
.+|++. |++.+..|.....+ .... ++....+....+|.+++++++..|..+. ....+.++++.+
T Consensus 71 ----------~~~~~~--vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~ 138 (342)
T COG2008 71 ----------CQPGES--VICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN 138 (342)
T ss_pred ----------cCCCCe--EEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee
Confidence 378885 99999999877533 2222 3333333334689999999999887421 223445555555
Q ss_pred ccCccccccCH---HHHHHHHHHcCCEEEEecc---CcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 242 CSNVTGIYSDT---RSIARLLHQYGGFACFDFA---ASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 242 ~~n~TG~~~~l---~~I~~la~~~g~~vivD~A---~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
.+|.-|+++|+ ++|.++||++|+.+|+|+| .++.....+...+.. ++|+++++++|.++.|.| .+++.+.++
T Consensus 139 ~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~-~~D~v~~~~tK~g~~~~g-Aiv~gn~~~ 216 (342)
T COG2008 139 TATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKS-YVDSVSFCLTKGGGAPVG-AIVFGNRDF 216 (342)
T ss_pred ccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHh-hCCEEEEecccCCcceee-eEEEcCHHH
Confidence 56688999885 5678899999999999998 222223344444432 899999999999988886 777888777
Q ss_pred cccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhh
Q 043646 316 YQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 316 ~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L 395 (625)
.+ .... -++...|-..-..++++.....+.+ .-+.....|...+++++.+.|
T Consensus 217 ~~--~a~~-------------------------~rK~~Ggl~~k~r~laA~~~~~l~~-~~~~~~~~Han~mA~~La~~~ 268 (342)
T COG2008 217 AK--RARR-------------------------WRKRAGGLMRKARFLAAQGLYALED-DVWRLAADHANAMAARLAEGL 268 (342)
T ss_pred HH--HHHH-------------------------HHHHhcccHhhhhHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhh
Confidence 32 1100 0111122223333444444444333 224566778888899999999
Q ss_pred CCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChh
Q 043646 396 LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 396 ~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~ 475 (625)
...||+++..+.. .+..|...+. ...+.|.. .|+..-.|..-.
T Consensus 269 ~~~~G~~~~~~~~----tN~vf~~l~~-------------------~~i~~l~~-~~~~~~~~~~~~------------- 311 (342)
T COG2008 269 EAKPGVKLAFPVE----TNMVFVRLPE-------------------SAIEALRL-AGALFYRGVLIG------------- 311 (342)
T ss_pred hhcCCceeccCCc----ccEEEEECCh-------------------HHHHHHHh-hchhheeeeecc-------------
Confidence 9889999987642 5566666553 12244422 344333221110
Q ss_pred hHHHHHHHHHhCCCCCCC-cEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 476 RSLEIRSAIQKGYLGVKP-GWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~~-g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.. ..+|+..++.++++||+.++..++.++
T Consensus 312 ----------------~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 312 ----------------AHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ----------------CCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 11 269999999999999999999999764
No 236
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=7.9e-18 Score=181.55 Aligned_cols=333 Identities=16% Similarity=0.140 Sum_probs=202.3
Q ss_pred ccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+.+..|+ -|+|..+. ++.++.+.+++.+.+.......+ .+ ......++.++++++++.+..+
T Consensus 35 ~~~~d~dg~---~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~--~~-----~~~~~~~la~~l~~~~~~~~~~ 104 (398)
T PRK03244 35 AVVWDVDGK---EYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSN--LF-----ATEPQIALAERLVELLGAPEGG 104 (398)
T ss_pred cEEEECCCC---EEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccC--cc-----CCHHHHHHHHHHHHhCCCCCCC
Confidence 444444443 37777552 45568999999888864311111 11 1123357889999998854323
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVEI 208 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v 208 (625)
+++|+.+|+.+ +..++.+.. .+|++.+|.+.+.+|.+....+...|. ++..+
T Consensus 105 ~v~~~~sgsea-~~~al~~~~---------------~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (398)
T PRK03244 105 RVFFCNSGAEA-NEAAFKLAR---------------LTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHV 168 (398)
T ss_pred EEEEeCchHHH-HHHHHHHHH---------------HHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEe
Confidence 79998555544 555544331 234333455555555554444433332 22333
Q ss_pred ecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCcc--c--
Q 043646 209 GLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVK--I-- 279 (625)
Q Consensus 209 ~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~~--i-- 279 (625)
|. .|+++|++++. +++++|+++.++|++|.+.| +++|.++|++||+++|+|++++. |... .
T Consensus 169 ~~-----~d~~~l~~~~~-----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~ 238 (398)
T PRK03244 169 PY-----GDVDALAAAVD-----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAH 238 (398)
T ss_pred CC-----CCHHHHHHhhc-----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhh
Confidence 32 37899998885 57899999999999999987 88999999999999999999762 2111 1
Q ss_pred cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH
Q 043646 280 NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359 (625)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 359 (625)
..... .+|++++ .|++++...+|++++++++ .+.+.+...+ .+ + .+.+..
T Consensus 239 ~~~~~---~pDi~t~--sK~l~~G~~ig~~~~~~~~--~~~~~~~~~~-~t---------------------~-~~~~~~ 288 (398)
T PRK03244 239 QHDGV---TPDVVTL--AKGLGGGLPIGACLAFGPA--ADLLTPGLHG-ST---------------------F-GGNPVA 288 (398)
T ss_pred hhhCC---CCCEEEE--chhhhCCcccEEEEEcHHH--HhhccCCCCc-CC---------------------C-CCCHHH
Confidence 11111 4687766 4999855568999999887 2333211100 00 0 122322
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
..++.++++.+ + .+.+.++.+++.+++++.|+++. ..++... ...+.++.+.+ +.. .
T Consensus 289 ~aaa~a~l~~~--~---~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~v-~g~g~~~~i~~-~~~---------------~ 345 (398)
T PRK03244 289 CAAALAVLDTI--A---SEGLLENAERLGEQLRAGIEALG-HPLVDHV-RGRGLLLGIVL-TAP---------------V 345 (398)
T ss_pred HHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHhcC-CCceeeE-eeccEEEEEEE-ecc---------------H
Confidence 22233334333 1 23466788888888999998752 2111111 11233444433 211 1
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
...+.+.|.+ +||.+++. .++.+||+++..++++|+++++++|+++
T Consensus 346 ~~~~~~~l~~-~Gv~~~~~---------------------------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~ 391 (398)
T PRK03244 346 AKAVEAAARE-AGFLVNAV---------------------------------APDVIRLAPPLIITDAQVDAFVAALPAI 391 (398)
T ss_pred HHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEECCCcCCHHHHHHHHHHHHHH
Confidence 4567777755 79998742 1367999999999999999999999998
Q ss_pred HHh
Q 043646 520 AAY 522 (625)
Q Consensus 520 ~~~ 522 (625)
+.+
T Consensus 392 l~~ 394 (398)
T PRK03244 392 LDA 394 (398)
T ss_pred HHh
Confidence 865
No 237
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.83 E-value=4.9e-18 Score=185.21 Aligned_cols=308 Identities=16% Similarity=0.153 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCC--CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 117 QRMTKMVHEASNYIKRCLGGG--QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 117 ~~~~~~~~~~~~~ia~~~g~~--~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
.+...+.+.+.+++....|.. ++ +|++| +|++++|.++++++ ++|||. |++..++|+..
T Consensus 132 ~G~~~LR~~ia~~l~~~~g~~~~~~-~IiiT-~G~q~al~l~~~~l---------------~~pGd~--v~vE~PtY~~~ 192 (459)
T COG1167 132 AGLPELREAIAAYLLARRGISCEPE-QIVIT-SGAQQALDLLLRLL---------------LDPGDT--VLVEDPTYPGA 192 (459)
T ss_pred CCcHHHHHHHHHHHHHhcCCccCcC-eEEEe-CCHHHHHHHHHHHh---------------CCCCCE--EEEcCCCcHHH
Confidence 345566666666666555554 44 89999 89999999999988 689995 99999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe-EEEEecccCccccccCH---HHHHHHHHHcCCEEEEec
Q 043646 195 LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM-LGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~-lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~ 270 (625)
...++..|++++.||+|++| +|+++|++.+.. .++| +.+.++.+||||..++. ++|.++|++||+++|.|.
T Consensus 193 ~~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~----~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD 267 (459)
T COG1167 193 LQALEALGARVIPVPVDEDG-IDPEALEEALAQ----WKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDD 267 (459)
T ss_pred HHHHHHcCCcEEecCCCCCC-CCHHHHHHHHhh----cCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeC
Confidence 99999999999999999655 799999999985 3677 55567888999999997 469999999999999999
Q ss_pred cCcCC----CccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 271 AASGP----YVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 271 A~~~g----~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
..+.- .-+..+..+...+--+++.||+|.+.....+|++++++++.+ .+.
T Consensus 268 ~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~--~~~------------------------ 321 (459)
T COG1167 268 YYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIE--KLL------------------------ 321 (459)
T ss_pred cchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHH--HHH------------------------
Confidence 85521 112123333333556888999999983346999999988632 110
Q ss_pred chhhhhcCCChhHHHHHHHHHHHHHHhhcCH----HHHHHHHHHHHHHHHHhhCCC-C-cEEEeCCCCCCCcceEEEEec
Q 043646 347 DIEERENGGTPQIVQMIRAALAFWVKEYIGY----EVIKKQEDVYIESALGRILPN-Q-NIQVLGNTSVKRQAILSFLVY 420 (625)
Q Consensus 347 ~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~----~~i~~~~~~l~~~l~~~L~~l-~-gv~v~~~~~~~~~~i~~f~~~ 420 (625)
........+++.+.+. +++.++. ..++ ..++.......+.+.+.|.+. + .+++..| .++.+.+...
T Consensus 322 ~~k~~~~~~~s~~~Q~---~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p----~gG~flwl~l 393 (459)
T COG1167 322 RLKQAADLGPSSLSQA---ALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRP----EGGLFLWLEL 393 (459)
T ss_pred HHHHHhcCCCChHHHH---HHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC----CceEEEEEEc
Confidence 0011223344444432 2222222 1122 355555566677777788764 3 5566655 3466666666
Q ss_pred cCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeec-CCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARG-GCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
++ +++...+.+.+.+ +||.+.+ |..|..... ..+++|++
T Consensus 394 ~~--------------~~~~~~l~~~a~~-~gv~i~~~g~~f~~~~~-------------------------~~~~~Rl~ 433 (459)
T COG1167 394 PE--------------GIDARELLAAALE-KGVVVTPLGSAFSADGD-------------------------PRNGLRLS 433 (459)
T ss_pred CC--------------CCCHHHHHHHHHH-CCCEEEcCCccccCCCC-------------------------CCCeEEEE
Confidence 54 2456677777755 6999988 877652110 24689999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 500 FPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
++. .+++++++.++.|..++.+.
T Consensus 434 ~s~-~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 434 FSS-PSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred cCC-CCHHHHHHHHHHHHHHHHHH
Confidence 975 45899999999998887653
No 238
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.83 E-value=3.4e-18 Score=179.56 Aligned_cols=273 Identities=17% Similarity=0.123 Sum_probs=178.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC
Q 043646 124 HEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA 203 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~ 203 (625)
.++++.|++++|. + +|++| +|++++|..++. +.+||+ |++..+.|+.+...++..|+
T Consensus 52 ~~Lr~~ia~~~~~--~-~I~it-~Gs~~al~~~~~-----------------~~~gd~--v~v~~P~y~~~~~~~~~~g~ 108 (330)
T PRK05664 52 DGLEAAARAYYGA--P-QLLPV-AGSQAAIQALPR-----------------LRAPGR--VGVLSPCYAEHAHAWRRAGH 108 (330)
T ss_pred HHHHHHHHHHhCC--C-CEEEC-cCHHHHHHHHHH-----------------ccCCCE--EEEcCCChHHHHHHHHHcCC
Confidence 4578999999985 3 78887 899999988743 357885 99999999999988999999
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHH---HHHHHHHHcCCEEEEeccCcCCCcccc
Q 043646 204 EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGPYVKIN 280 (625)
Q Consensus 204 ~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~---~I~~la~~~g~~vivD~A~~~g~~~id 280 (625)
+++.++++ ++++++. +++++++++|+||||.+.+.+ +|+++|+++|+++++|+++........
T Consensus 109 ~~~~v~~~--------~~~~~~~------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s 174 (330)
T PRK05664 109 QVRELDEA--------EVEAALD------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHS 174 (330)
T ss_pred eEEEechh--------hHhhhhc------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCccc
Confidence 99999753 3455443 578899999999999998854 556667889999999999653221112
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 359 (625)
+..+....--+++.|++|.+|.|+ .+|++++++++.+ .+.... ...+....
T Consensus 175 ~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~--~~~~~~--------------------------~~~~~~~~ 226 (330)
T PRK05664 175 LAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLR--ALAELL--------------------------GPWTVSGP 226 (330)
T ss_pred ccccccCCCEEEEeeccccccCCCcceEEEEeCHHHHH--HHHHhc--------------------------CCCCCCHH
Confidence 222211111266779999998665 4899999877632 211000 00011111
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
.+. ++..+ +.+....+..+++....++++.+.|.++ +++..+ ..+++.+...+ +
T Consensus 227 ~~~--~~~~~-L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~-----~~~~f~~~~~~-----------------~ 280 (330)
T PRK05664 227 TRW--LAQAA-LADTPWQRRQRERLLAASQRLAALLRRH-GLTPAG-----GCALFQWVRTE-----------------D 280 (330)
T ss_pred HHH--HHHHH-HhChHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-----CcceEEEEecC-----------------C
Confidence 111 11112 1121223455666666788888888876 443211 11233333221 2
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
..++.+.|. ++||.++. |. .++++||+++. +.+++++++++|+.+
T Consensus 281 ~~~~~~~l~-~~gi~v~~---f~-----------------------------~~~~iRis~~~--~~~~~~~l~~al~~~ 325 (330)
T PRK05664 281 AAALHEFLA-RRGILTRL---FE-----------------------------QPASLRFGLPA--DEADWARLDQALLAY 325 (330)
T ss_pred HHHHHHHHH-HCCeEEEE---CC-----------------------------CCCeEEEECCC--CHHHHHHHHHHHHHH
Confidence 457888885 47999973 22 13789999984 678999999999988
Q ss_pred HHh
Q 043646 520 AAY 522 (625)
Q Consensus 520 ~~~ 522 (625)
.++
T Consensus 326 ~~~ 328 (330)
T PRK05664 326 RKE 328 (330)
T ss_pred Hhh
Confidence 665
No 239
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=1.7e-18 Score=184.10 Aligned_cols=231 Identities=16% Similarity=0.209 Sum_probs=156.1
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH
Q 043646 116 GQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL 195 (625)
Q Consensus 116 ~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (625)
++......+++++.++++.|++. .++ +++|+ +++..++. + +++||+ |+++.+.|++..
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~--~~~-~~sG~-~ai~~~~~-l---------------l~~Gd~--Vl~~~~~y~~t~ 104 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQ--GFA-CSSGM-AAIQLVMS-L---------------FRSGDE--LIVSSDLYGGTY 104 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCc--EEE-EcCHH-HHHHHHHH-H---------------hCCCCE--EEEecCCcCcHH
Confidence 33334456789999999999964 344 44564 56766553 3 468885 888888887754
Q ss_pred HH----HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEecc
Q 043646 196 LS----WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 196 ~~----~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A 271 (625)
.. ++..|++++.++.. |+++++++++ +++++|++++|+||+|.+.++++|+++||++|+++++|++
T Consensus 105 ~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~-----~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t 174 (366)
T PRK08247 105 RLFEEHWKKWNVRFVYVNTA-----SLKAIEQAIT-----PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNT 174 (366)
T ss_pred HHHHHHhhccCceEEEECCC-----CHHHHHHhcc-----cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 33 34479999988753 8999999987 5799999999999999999999999999999999999999
Q ss_pred CcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEec-cccccCCCCCcccCCceEEeeccccccccccccch
Q 043646 272 ASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISK-ALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDI 348 (625)
Q Consensus 272 ~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~-~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (625)
++.+.....+. .+.|+++.|++|+++|+.+ .|+++.++ .+. ..+...
T Consensus 175 ~~~~~~~~p~~----~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~--~~~~~~------------------------ 224 (366)
T PRK08247 175 FYTPVLQRPLE----EGADIVIHSATKYLGGHNDVLAGLVVAKGQELC--ERLAYY------------------------ 224 (366)
T ss_pred CccccccCchh----cCCcEEEeecceeccCCCceeeeEEecChHHHH--HHHHHH------------------------
Confidence 87655433222 2789999999999998754 46666653 331 111100
Q ss_pred hhhhcCCCh-hHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEE-eCCCCCCCcceEEEEe
Q 043646 349 EERENGGTP-QIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQV-LGNTSVKRQAILSFLV 419 (625)
Q Consensus 349 ~~~~~~gt~-~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v-~~~~~~~~~~i~~f~~ 419 (625)
........ ++.+.+ ..++ .......++.+++++.+.+.|++.|++.. ..|. .+++++|.+
T Consensus 225 -~~~~g~~~s~~~a~l~~~~l-------~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~---~gg~~sf~~ 287 (366)
T PRK08247 225 -QNAAGAVLSPFDSWLLIRGM-------KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG---RGGMLSFRL 287 (366)
T ss_pred -HHhcCCCCChHHHHHHHhcc-------CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC---cCcEEEEEE
Confidence 00001111 111111 1111 12333444567788999999999998874 3432 468888865
No 240
>PRK04311 selenocysteine synthase; Provisional
Probab=99.83 E-value=1.5e-17 Score=180.08 Aligned_cols=206 Identities=17% Similarity=0.165 Sum_probs=148.1
Q ss_pred CceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 76 RRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 76 ~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
...+|+++.+.++.++.+.+++.+.+..+ .|.+. ....+. ....++.+++.+++++|++. .+++++|+ +++..
T Consensus 85 tg~v~~tNlg~s~l~~~v~eav~~~~~~~-~~le~-~l~~g~-~g~r~~~~e~~lA~l~Gae~---a~vv~sgt-aAl~l 157 (464)
T PRK04311 85 TGVVLHTNLGRALLSEAAIEAVTEAARGY-SNLEY-DLATGK-RGSRDRALAALLCALTGAED---ALVVNNNA-AAVLL 157 (464)
T ss_pred CccEEeccCCCCCCCHHHHHHHHHHHhcc-ccccc-chhhcc-cchHHHHHHHHHHHHhCCCe---EEEECCHH-HHHHH
Confidence 35677777788899999999998877542 33221 111111 23446789999999999862 34554655 66766
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh----H--HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhh
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN----L--LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYK 229 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~----~--~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~ 229 (625)
++.++ .+|++ |+++..+|+.+ . ..++..|+++++++.+ +..++++++++|+
T Consensus 158 ~l~~l----------------~~Gde--VIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~--- 214 (464)
T PRK04311 158 ALNAL----------------AAGKE--VIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAIN--- 214 (464)
T ss_pred HHHHh----------------CCCCE--EEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcC---
Confidence 65543 57775 88888776632 1 2345679999999764 3457999999998
Q ss_pred hCCCCeEEEEecccCc--cc--cccCHHHHHHHHHHcCCEEEEeccCcC---------CCccccCCCCCCCCCcEEEEcC
Q 043646 230 AAKRPMLGSFSACSNV--TG--IYSDTRSIARLLHQYGGFACFDFAASG---------PYVKINLRSRNIDGYDAIFLAT 296 (625)
Q Consensus 230 ~~~~~~lv~~~~~~n~--TG--~~~~l~~I~~la~~~g~~vivD~A~~~---------g~~~id~~~~~~~~~D~v~~S~ 296 (625)
++|++|+++|++|+ +| ...|+++|+++||+||+++++|.+++. +..+ ++......|+|++++|+
T Consensus 215 --~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l~~GaDiv~fSg 291 (464)
T PRK04311 215 --ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELLAAGVDLVTFSG 291 (464)
T ss_pred --ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHHhcCCcEEEecC
Confidence 57999999999997 45 568999999999999999999996432 1112 22221113899999999
Q ss_pred CCCCCCCCCceEEEEeccc
Q 043646 297 HKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 297 hK~lggp~g~G~l~v~~~~ 315 (625)
|||+|||. .|++++++++
T Consensus 292 ~K~LgGp~-~G~i~g~~~l 309 (464)
T PRK04311 292 DKLLGGPQ-AGIIVGKKEL 309 (464)
T ss_pred cccccCCc-eEEEEEcHHH
Confidence 99999997 6999999887
No 241
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.82 E-value=1.2e-17 Score=180.40 Aligned_cols=333 Identities=14% Similarity=0.119 Sum_probs=202.2
Q ss_pred EeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 043646 79 TYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAA 152 (625)
Q Consensus 79 ~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaa 152 (625)
-|+|.. ..|...+.|.+++.+.+........ .+ ..+...+++++++++++.+ .++|+.||+.+.
T Consensus 42 ~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~--~~-----~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~ 111 (401)
T PRK00854 42 RYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR--AF-----RNDQLAPLYEELAALTGSH---KVLPMNSGAEAV 111 (401)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc--cc-----CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHH
Confidence 477742 2334578999999998865311110 01 1346677889999998853 678887888875
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc------------CCeEEEEecCCCCCCCHHH
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS------------LAEVVEIGLDDNGLLDIEA 220 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~------------G~~vv~v~~~~~~~ld~~~ 220 (625)
..++-.++.... -.++.+++...+|+.....|.+....+... ...+..++. .|+++
T Consensus 112 e~al~~a~~~~~-------~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~ 179 (401)
T PRK00854 112 ETAIKAVRKWGY-------EVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEA 179 (401)
T ss_pred HHHHHHHHHHHH-------hccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHH
Confidence 554433331000 000122332224555555566554333211 112333432 38899
Q ss_pred HHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCccccC--CCCCCCCCcEEE
Q 043646 221 LRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVKINL--RSRNIDGYDAIF 293 (625)
Q Consensus 221 L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~id~--~~~~~~~~D~v~ 293 (625)
|++++. +++++|++++++|++|.+.| +++|.++|++||+++++|++++ +|.....+ ...+. .+|+++
T Consensus 180 le~~i~-----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~-~~D~~~ 253 (401)
T PRK00854 180 LEAAIT-----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGI-EADVTL 253 (401)
T ss_pred HHHHhC-----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCC-CCCEEE
Confidence 999987 57999999999999999987 9999999999999999999987 54433111 11111 468888
Q ss_pred EcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHH
Q 043646 294 LATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVK 372 (625)
Q Consensus 294 ~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~ 372 (625)
++ |++++.. .+|+++.++++ +..+.+... +.+ + .+.+.......++++.+
T Consensus 254 ~~--K~l~gg~~~ig~v~~~~~~--~~~l~~~~~-~~t---------------------~-~~~~~~~aa~~a~L~~l-- 304 (401)
T PRK00854 254 IG--KALSGGFYPVSAVLSNSEV--LGVLKPGQH-GST---------------------F-GGNPLACAVARAALKVL-- 304 (401)
T ss_pred ec--ccccCCccCeEEEEEcHHH--HhcccCCCC-CCC---------------------C-CcCHHHHHHHHHHHHHH--
Confidence 75 9997543 37888988887 333322110 000 0 12223333334455543
Q ss_pred hhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcC
Q 043646 373 EYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFG 452 (625)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~g 452 (625)
+. +.+.++.+.+.+++.+.|+++.. ...... ...+.++.+.+.++. ....++++.|.+ .|
T Consensus 305 ~~---~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~g~g~~~~i~~~~~~--------------~~~~~~~~~L~~-~G 364 (401)
T PRK00854 305 TE---EGMIENAAEMGAYFLEGLRSIRS-NIVREV-RGRGLMLAVELEPEA--------------GGARQYCEALKE-RG 364 (401)
T ss_pred HH---cCHHHHHHHHHHHHHHHHHhhcc-CceEEE-eccceEEEEEEecCc--------------hhHHHHHHHHHH-CC
Confidence 21 23556777788888888877632 111110 123455555443321 124678888866 69
Q ss_pred eeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 453 IQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 453 I~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
|.+.+. .++++|+++++.++++|+++++++|++++.
T Consensus 365 V~v~~~---------------------------------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 365 LLAKDT---------------------------------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred eEEecC---------------------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 998521 137899999999999999999999998764
No 242
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=9.8e-19 Score=185.17 Aligned_cols=299 Identities=13% Similarity=0.109 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
.....+++++++++.|.+ .++.+ +|.++++..++.. +++||+ |+++...|......+.
T Consensus 53 ~p~~~~le~~lA~leg~~---~~v~~-~sG~aAi~~~l~~----------------l~~GD~--VI~~~~~yg~~~~~~~ 110 (364)
T PRK07269 53 NPTRAKLEETLAAIESAD---YALAT-SSGMSAIVLAFSV----------------FPVGSK--VVAVRDLYGGSFRWFN 110 (364)
T ss_pred CccHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHH----------------hCCCCE--EEEecCCcCchHHHHH
Confidence 344667899999999864 56666 4556667766643 468886 7777777765543322
Q ss_pred Hc----CCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 200 QS----LAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 200 ~~----G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
.. +.++. ...|+++++++++ ++|++|++++|+||||.+.|+++|+++||++|+++++|++++.+
T Consensus 111 ~~~~~~~~~~~-------~~~d~~~l~~~i~-----~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~ 178 (364)
T PRK07269 111 QQEKEGRFHFT-------YANTEEELIAAIE-----EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSP 178 (364)
T ss_pred HHHhcCcEEEE-------ecCCHHHHHHhcC-----cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccc
Confidence 21 22211 1248899999997 68999999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
+....+. . ++|++++|.+|+++|++. .|++++++... .+.+.. .+..
T Consensus 179 ~~~~pl~-~---gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l-~~~~~~--------------------------~~~~ 227 (364)
T PRK07269 179 IYQRPIE-L---GADIVLHSATKYLSGHNDVLAGVVVTNDLEL-YEKLFY--------------------------NLNT 227 (364)
T ss_pred ccCCchh-h---CCcEEEecCceeccCCCcccceEEEeCcHHH-HHHHHH--------------------------HHHH
Confidence 5433222 2 899999999999998775 47767654321 111100 0001
Q ss_pred CC-ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCCCCCcceEEEEeccCCCCCCcccc
Q 043646 354 GG-TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTSVKRQAILSFLVYSTTNSSPENMK 431 (625)
Q Consensus 354 ~g-t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 431 (625)
.| ..+.. .+.+... .....+.+.++..+++.++.++|++.|.+. ++.|. .++.++|.+....
T Consensus 228 ~G~~~s~~---~a~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg---~gg~~sf~~~~~~-------- 291 (364)
T PRK07269 228 TGAVLSPF---DSYLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG---KGGMISFKVADET-------- 291 (364)
T ss_pred hCCCCCHH---HHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC---cCcEEEEEECCHH--------
Confidence 11 11111 1111111 222355666777888999999999988864 44443 5789999884210
Q ss_pred ccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 432 IERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 432 ~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
....+.+.| +.+.+.++-|...+. |.......+..+. ..+ .|+.++.||+|+|. ||
T Consensus 292 -------~~~~f~~~l-~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~--------r~~-~Gi~~~liRlsvGl----E~ 350 (364)
T PRK07269 292 -------RIPHILNSL-KVFTFAESLGGVESLITYPTTQTHADIPAEV--------RHS-YGLTDDLLRLSIGI----ED 350 (364)
T ss_pred -------HHHHHHHhC-CcceEccCCCCcCeEeeCCcccccccCCHHH--------HHh-cCCCCCeEEEEecc----CC
Confidence 012344444 334444444433221 2111111222111 111 45678999999996 56
Q ss_pred HHHHHHHHHHHH
Q 043646 509 FEFILAALEFIA 520 (625)
Q Consensus 509 id~ll~aL~~~~ 520 (625)
++.+++-|++.+
T Consensus 351 ~~dli~dl~~al 362 (364)
T PRK07269 351 ARDLIADLKQAL 362 (364)
T ss_pred HHHHHHHHHHHh
Confidence 666666666544
No 243
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.82 E-value=5.3e-18 Score=183.67 Aligned_cols=349 Identities=10% Similarity=0.003 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
..++++.+++++|.+ .+++++||+.+ +..++.++..... . ...++|||+ |+++.++|.++..++...|
T Consensus 65 ~~~fe~~lA~~~g~~---~~v~~~sGt~a-l~~aL~al~~~~~---~---~~~~~pGd~--VIv~~~t~~a~~~~v~~~G 132 (438)
T PRK15407 65 NDAFEKKLAEFLGVR---YALLVNSGSSA-NLLAFSALTSPKL---G---DRALKPGDE--VITVAAGFPTTVNPIIQNG 132 (438)
T ss_pred HHHHHHHHHHHhCCC---eEEEECCHHHH-HHHHHHHHhhccc---c---ccCCCCCCE--EEECCCCcHHHHHHHHHcC
Confidence 567899999999985 46777566655 4444443300000 0 002578886 9999999999999999999
Q ss_pred CeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccC
Q 043646 203 AEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINL 281 (625)
Q Consensus 203 ~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~ 281 (625)
++++.++++. ++.+|+++++++++ +++++|+++++ +|...++++|.++|+++|++|++|++|+.|...-+.
T Consensus 133 ~~pv~vdvd~~~~~id~~~le~~i~-----~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~ 204 (438)
T PRK15407 133 LVPVFVDVELPTYNIDASLLEAAVS-----PKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR 204 (438)
T ss_pred CEEEEEecCCCcCCcCHHHHHHHcC-----cCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCe
Confidence 9999999974 67899999999987 58999999874 688899999999999999999999999998765443
Q ss_pred CCCCCCCCcEEEEcCC--CCCCCCCCceEEEEeccccccCCCCCcccCCceEE---ee-c-----ccccc---ccccccc
Q 043646 282 RSRNIDGYDAIFLATH--KFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVN---YV-N-----AFDEK---DTLYLED 347 (625)
Q Consensus 282 ~~~~~~~~D~v~~S~h--K~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~---~~-~-----~~~~~---~~~~~~~ 347 (625)
..+.. | |+.++|+| |.+....| |+++++++.. ....+....+|... .. . .+... ....++.
T Consensus 205 ~~G~~-g-d~~~fSf~~~k~~~~geG-G~l~t~d~~l--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (438)
T PRK15407 205 MTGTF-G-DIATLSFYPAHHITMGEG-GAVFTNDPLL--KKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDH 279 (438)
T ss_pred eeecc-C-ceEEEeCCCCCCccccCc-eEEEECCHHH--HHHHHHHHHhCcccccccccccccccccccccccccccccc
Confidence 22211 3 78787775 55644344 8888887652 11111111111100 00 0 00000 0000000
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCCCCCCcceEEEEeccCCCCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNTSVKRQAILSFLVYSTTNSS 426 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~ 426 (625)
.-.....|...-+.-+.||+... +....+.+.++.+++++++.+.|.+++++ .+...........+.|.+.-..
T Consensus 280 ~~~~~~~G~n~rmsel~AAig~~--qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--- 354 (438)
T PRK15407 280 KYTYSHLGYNLKITDMQAAIGLA--QLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE--- 354 (438)
T ss_pred cccccccccccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC---
Confidence 00000122211111223333332 22235677778888899999999988753 2222111112222333332211
Q ss_pred CccccccCCCCCChHHHHHHhhhhcCeeeecCCC-C-C-chhhHhh-h--cCChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 427 PENMKIERNKPLHGPFVATLFNDLFGIQARGGCA-C-A-GPYGHTL-L--AFDQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 427 ~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~-~-~-~~~~~~~-l--~~~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
..+++..++.+.|.+ .||.++.... + . .|+.... . ..+-+.++++ ....+-+.+
T Consensus 355 --------~~~~~Rd~l~~~L~~-~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~-----------~~~~l~LP~ 414 (438)
T PRK15407 355 --------DAGFTRVELVKYLEE-NKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRI-----------MNDTFWIGV 414 (438)
T ss_pred --------cCCCCHHHHHHHHHH-CCCCccccCCCccccChhhhhcCCCCCCCChHHHHH-----------HhCeEEecC
Confidence 123457789999965 7998875332 1 0 0111100 0 0011222222 246788888
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 043646 501 PYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 501 ~~~~t~edid~ll~aL~~~~~ 521 (625)
+..+|++|+++++++|++++.
T Consensus 415 ~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 415 YPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCCCHHHHHHHHHHHHHHHh
Confidence 888999999999999998874
No 244
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.82 E-value=1.5e-17 Score=179.11 Aligned_cols=335 Identities=14% Similarity=0.119 Sum_probs=201.4
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| ..|+|..+ .|...+.|.+++.+.+......... ...+...++.++++++.+. +
T Consensus 31 G~~l~d~~G---~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~~~~--~ 98 (396)
T PRK04073 31 GVWVKDPEG---NRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRA-------FHSDQLGPWYEKVAKLTGK--D 98 (396)
T ss_pred ecEEEECCC---CEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccc-------cCCHHHHHHHHHHHhcCCC--C
Confidence 344444444 34888743 3456789999999888643211100 1224456677888888764 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCe------------EEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAE------------VVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~------------vv~ 207 (625)
.++|+.||+++...++-.++.... . .++.+++...+|......|.....++...+.. +..
T Consensus 99 -~~~~~~SGseA~e~Alk~a~~~~~------~-~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (396)
T PRK04073 99 -MVLPMNTGAEAVETAIKAARRWAY------D-VKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKK 170 (396)
T ss_pred -eEEEcCChHHHHHHHHHHHHHHhh------h-ccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceE
Confidence 688887888885444433321000 0 00112343324444455666665555433321 223
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCcc----
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVK---- 278 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~---- 278 (625)
++. -|++++++++. +++++|+++.++|++|.+.| +++|.++|++||+++++|+++. +|...
T Consensus 171 ~~~-----~d~~~l~~~i~-----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~ 240 (396)
T PRK04073 171 IPY-----GDLEALKAAIT-----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA 240 (396)
T ss_pred eCC-----CCHHHHHHhcc-----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH
Confidence 332 27899998886 57899999999999999976 7899999999999999999977 33211
Q ss_pred ccCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCCh
Q 043646 279 INLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTP 357 (625)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~ 357 (625)
.+.... .+|++++| |.+|++ ..+|++++++++. +.+.+... +.+ ..+.|
T Consensus 241 ~~~~~~---~pdi~~~s--K~lg~gg~~ig~~~~~~~i~--~~~~~~~~-~~t----------------------~~~~~ 290 (396)
T PRK04073 241 CDWDNV---TPDMYILG--KALGGGVFPISCVAANRDIL--GVFTPGSH-GST----------------------FGGNP 290 (396)
T ss_pred hhhcCC---CCCEEEec--ccccCCCCcceEEEEcHHHH--hhhcCCCC-CCC----------------------CCCCH
Confidence 122222 57888765 999866 3489999998873 33221110 000 01223
Q ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC--CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 358 QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN--QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 358 ~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l--~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
.......++++.+ +. +.+.++.+.+.+++.+.|+++ +.+..+. .++.++.+.+ +.
T Consensus 291 ~~~aaa~aaL~~~--~~---~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~----~~g~~~~~~~-~~------------- 347 (396)
T PRK04073 291 LACAVSIAALEVL--EE---EKLPERSLELGEYFKEQLKEIDNPMIKEVR----GRGLFIGVEL-NE------------- 347 (396)
T ss_pred HHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHhhcCCccccee----cceEEEEEEe-cc-------------
Confidence 2222233445443 22 245567777888898888775 2222111 1233333322 21
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAA 515 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~a 515 (625)
....+.+.|.+ +||.+.+. .++++||++++.+|++|+++++++
T Consensus 348 ---~~~~~~~~l~~-~Gv~~~~~---------------------------------~~~~iRi~p~l~~t~e~i~~~~~~ 390 (396)
T PRK04073 348 ---PARPYCEALKE-EGLLCKET---------------------------------HETVIRFAPPLVITKEELDWAFEK 390 (396)
T ss_pred ---hHHHHHHHHHH-CCeEEecC---------------------------------CCCEEEEECCcccCHHHHHHHHHH
Confidence 14578888865 69998631 137899999999999999999999
Q ss_pred HHHHH
Q 043646 516 LEFIA 520 (625)
Q Consensus 516 L~~~~ 520 (625)
|++++
T Consensus 391 l~~~l 395 (396)
T PRK04073 391 IKAVL 395 (396)
T ss_pred HHHHh
Confidence 98764
No 245
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.82 E-value=1.5e-17 Score=180.20 Aligned_cols=341 Identities=15% Similarity=0.116 Sum_probs=204.0
Q ss_pred EeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 043646 79 TYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAA 152 (625)
Q Consensus 79 ~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaa 152 (625)
-|+|..+ .+..++.|.+++.+.+..... +..+....+...++++.++++++.+.+ .++|+.+|+.+
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgsea- 108 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTH------FSLGFFYNEPAVELAELLLALTPEGLD-KVFFVNSGTEA- 108 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcC------ccCcccCCHHHHHHHHHHHHhCCCCCC-EEEEcCcHHHH-
Confidence 3666544 344678999999888843211 111111346678899999999997555 78898555555
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------CeEEEEecCCC------C
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AEVVEIGLDDN------G 214 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~vv~v~~~~~------~ 214 (625)
+..++.++. .+.++++ +++.....|.+....+...+ .+++.+|.+.. .
T Consensus 109 ~~~al~~~~-------------~~~~~~~-ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (413)
T cd00610 109 VEAALKLAR-------------AYTGRKK-IISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAEL 174 (413)
T ss_pred HHHHHHHHH-------------HHcCCCe-EEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhH
Confidence 444444331 0234554 44445556665554444332 24566666521 2
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCC-Ccc--ccCCCCCCC
Q 043646 215 LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-YVK--INLRSRNID 287 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g-~~~--id~~~~~~~ 287 (625)
..|+++|+++++++ .+++++++++..++++|.+.| +++|.++|++||+++++|++++.. ... ......+.
T Consensus 175 ~~d~~~l~~~l~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~- 251 (413)
T cd00610 175 ADDLEALEEALEEH--PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV- 251 (413)
T ss_pred HHHHHHHHHHHhcC--CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-
Confidence 34888999988731 236788999988899999887 999999999999999999998732 111 11111111
Q ss_pred CCcEEEEcCCCCCCCCCCceEEEEeccccccCCC--CCcccCCceEEeeccccccccccccchhhhhcCCChhH-HHHHH
Q 043646 288 GYDAIFLATHKFLGGPGTPGILLISKALYQLGSS--PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI-VQMIR 364 (625)
Q Consensus 288 ~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~--~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~~~~ 364 (625)
.+|++++| |+++++..+|+++.++++. +.+ .+... ....+.+++ ...+.
T Consensus 252 ~~d~~t~s--K~l~~g~~~g~~~~~~~~~--~~~~~~~~~~------------------------~~t~~~~~~~~~a~~ 303 (413)
T cd00610 252 EPDIVTLG--KGLGGGLPLGAVLGREEIM--DAFPAGPGLH------------------------GGTFGGNPLACAAAL 303 (413)
T ss_pred CCCeEEEc--ccccCccccEEEEEcHHHH--HhhccCCCCC------------------------CCCCCcCHHHHHHHH
Confidence 45776555 9998766689999988773 222 11100 001122222 22233
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHH
Q 043646 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFV 443 (625)
Q Consensus 365 aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v 443 (625)
++++++. . +.+.++.+.+.+++.+.|+.+... .+.... ...++++.+.+....... .........+
T Consensus 304 a~l~~l~--~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~ 370 (413)
T cd00610 304 AVLEVLE--E---EGLLENAAELGEYLRERLRELAEKHPLVGDV-RGRGLMIGIELVKDRATK-------PPDKELAAKI 370 (413)
T ss_pred HHHHHHH--h---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEe-ecCceEEEEEEecCCCcC-------CcchHHHHHH
Confidence 4455542 2 345667777777887777654210 111110 124566666654321000 0000124567
Q ss_pred HHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 444 ATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 444 ~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.+.|.+ +||.+.++. ++.+|+++++.+|++|+++++++|+++
T Consensus 371 ~~~l~~-~gv~v~~~~---------------------------------~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 371 IKAALE-RGLLLRPSG---------------------------------GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred HHHHHH-CCeEEeecC---------------------------------CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 777755 699998542 267999999999999999999999875
No 246
>PRK08354 putative aminotransferase; Provisional
Probab=99.82 E-value=1.1e-17 Score=174.13 Aligned_cols=185 Identities=15% Similarity=0.068 Sum_probs=133.8
Q ss_pred CceEeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHH
Q 043646 76 RRLTYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKR 155 (625)
Q Consensus 76 ~~~~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~ 155 (625)
...+.|+.+.....|+.+.+++.+.+... + .|. ....+++++++++|. +|++| +|++++|..
T Consensus 8 ~~~i~l~~~~np~~p~~~~~a~~~~~~~~----~--~yp-------~~~~l~~~ia~~~~~----~I~vt-~G~~~al~~ 69 (311)
T PRK08354 8 EGLIDFSASVNPYPPEWLDEMFERAKEIS----G--RYT-------YYEWLEEEFSKLFGE----PIVIT-AGITEALYL 69 (311)
T ss_pred cceeEecCCCCCCCCHHHHHHHHHHHHHh----h--cCC-------ChHHHHHHHHHHHCC----CEEEC-CCHHHHHHH
Confidence 45677776655555678888887655321 1 111 124578899999983 68887 899999988
Q ss_pred HHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM 235 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~ 235 (625)
++..+ .+||+ |+++.+.|+.+...++..|++++.++ +|++.|+++++ +++
T Consensus 70 ~~~~~----------------~~gd~--vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~------~~~ 119 (311)
T PRK08354 70 IGILA----------------LRDRK--VIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE------RNS 119 (311)
T ss_pred HHHhh----------------CCCCe--EEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc------CCC
Confidence 77543 46775 99999999999989999999997764 47888887765 467
Q ss_pred EEEEecccCccccccCH---HHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEE
Q 043646 236 LGSFSACSNVTGIYSDT---RSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLI 311 (625)
Q Consensus 236 lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v 311 (625)
++++++|+||||.+.+. ++|+++|+++|+++|+|+++..-...- .... ..--+++.|++|.|+.|+ .+|++++
T Consensus 120 ~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~--~~~~-~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 120 VVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP--ESPE-GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred EEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc--cccC-CCcEEEEeccHhhcCCccceeeeeee
Confidence 89999999999999874 566777889999999999964321110 1110 123467789999998664 4899887
No 247
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=8.1e-18 Score=180.47 Aligned_cols=331 Identities=14% Similarity=0.097 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH---
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS--- 197 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--- 197 (625)
...+++++.++++.|... .+.++||+. ||..++.++ +++||+ ||+++..|.+....
T Consensus 61 Ptv~~lE~~la~leg~~~---av~~~SG~a-Ai~~al~al---------------l~~GD~--VI~~~~~Y~~T~~~~~~ 119 (432)
T PRK06702 61 PTLAAFEQKLAELEGGVG---AVATASGQA-AIMLAVLNI---------------CSSGDH--LLCSSTVYGGTFNLFGV 119 (432)
T ss_pred cHHHHHHHHHHHHhCCCc---EEEECCHHH-HHHHHHHHh---------------cCCCCE--EEECCCchHHHHHHHHH
Confidence 346778999999999853 344535554 566665555 578995 99999888766554
Q ss_pred -HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 198 -WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 198 -~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
+...|++++++.. .+|+++++++|+ ++|++|++.++.||++.+.|+++|+++||++|+++++|++.+.|+
T Consensus 120 ~l~~~Gi~v~~vd~----~~d~~~l~~~I~-----~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~ 190 (432)
T PRK06702 120 SLRKLGIDVTFFNP----NLTADEIVALAN-----DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY 190 (432)
T ss_pred HHHHCCCEEEEECC----CCCHHHHHHhCC-----cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh
Confidence 5667999999964 368999999998 689999999999999999999999999999999999999977553
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC-c-eEEEEeccccccCCCC--------CcccCCceEEeeccccccccccc-
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT-P-GILLISKALYQLGSSP--------PSTCGGGTVNYVNAFDEKDTLYL- 345 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-~-G~l~v~~~~~~l~~~~--------p~~~ggg~v~~~~~~~~~~~~~~- 345 (625)
..-.+ +. |+|+++.|..||++|..+ + |+++....+. ....+ +.++. . .+.. +.....+.
T Consensus 191 ~~~pl-~~---GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~-w~~~~~~~l~~~~~~~~~-~--~~~~--~~~~~~~~~ 260 (432)
T PRK06702 191 LCQAF-EH---GANIIVHSTTKYIDGHASSLGGIVIDGGNFD-WTNGKYPELVEPDPSYHG-V--SYVQ--NFGAAAYIV 260 (432)
T ss_pred hCChh-hc---CCCEEEEccccccCCCcceeceEEEeCCCcc-cccccccccccccccccc-c--chhh--ccchhhHHH
Confidence 32111 22 899999999999998864 3 4443333220 00000 00000 0 0000 00000000
Q ss_pred -cchhhhhcCCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC--------------
Q 043646 346 -EDIEERENGGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------- 408 (625)
Q Consensus 346 -~~~~~~~~~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------- 408 (625)
.........|+ .+... +.+... .....+.+.++..+++..+.++|++.|.++ |+.|.-
T Consensus 261 ~~~~~~~~~~g~~~sp~~---a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~ 335 (432)
T PRK06702 261 KARVQLLRDYGNCMSPFN---AYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLK 335 (432)
T ss_pred HHHHHHHHHccCCCCHHH---HHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCc
Confidence 00001112222 22111 111111 122345556666788999999999998875 433311
Q ss_pred CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC---chhhHhhhcCChhhHHHHHHHHH
Q 043646 409 VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA---GPYGHTLLAFDQTRSLEIRSAIQ 485 (625)
Q Consensus 409 ~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~ 485 (625)
..-+++++|.+..+. -....+.+.| +.+.+.+.-|..-+ .|.......+..+...
T Consensus 336 ~g~gg~~sf~l~~~~--------------~~~~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~------- 393 (432)
T PRK06702 336 KGASGVLTFGIKGGL--------------EAAKEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQR------- 393 (432)
T ss_pred CCCceEEEEEecCCH--------------HHHHHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHH-------
Confidence 113578888885211 0123455555 44555554443211 0221112222221111
Q ss_pred hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 486 KGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 486 ~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
..|+.++.||||+|. ||.|.|++-|++.+..+.
T Consensus 394 --~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~~~~ 426 (432)
T PRK06702 394 --LAGVTSDLIRLSVGI----EDVSDIIADLEAALVGGK 426 (432)
T ss_pred --hcCCCCCeEEEEecc----CCHHHHHHHHHHHHhcCc
Confidence 256778999999985 677778888887776653
No 248
>PRK10534 L-threonine aldolase; Provisional
Probab=99.81 E-value=3.4e-18 Score=179.89 Aligned_cols=309 Identities=14% Similarity=0.103 Sum_probs=183.8
Q ss_pred cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 88 RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
.+++.+.+++.+..... . .| + ......++++.|++++|.++. +++++|+.+.+..+. ++
T Consensus 11 ~p~~~~~~a~~~~~~~~----~--~Y--~--~~~~~~~L~~~la~~~g~~~~---~v~~~g~~a~~~~l~-~~------- 69 (333)
T PRK10534 11 RPSRAMLEAMMAAPVGD----D--VY--G--DDPTVNALQDYAAELSGKEAA---LFLPTGTQANLVALL-SH------- 69 (333)
T ss_pred CCCHHHHHHHHhccCCC----c--cc--C--CCHHHHHHHHHHHHHhCCCeE---EEeCchHHHHHHHHH-Hh-------
Confidence 36678888886643211 1 11 1 123467789999999998643 455456655443333 33
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchhHHH--HHHcC-CeEEEEecCCCCCCCHHHHHHHHHHhh-hCCCCeEEEEeccc
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLS--WRQSL-AEVVEIGLDDNGLLDIEALRSQLELYK-AAKRPMLGSFSACS 243 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--~~~~G-~~vv~v~~~~~~~ld~~~L~~~l~~~~-~~~~~~lv~~~~~~ 243 (625)
+.+||+ |+++.+.|.+.... ....| ++++.++++.++.+|+++|+++++++. ...++++|++++++
T Consensus 70 --------~~~gd~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~ 139 (333)
T PRK10534 70 --------CERGEE--YIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH 139 (333)
T ss_pred --------cCCCCe--eEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence 467885 77777777543321 23333 688888887778999999999886210 00158999998654
Q ss_pred CccccccCHHH---HHHHHHHcCCEEEEeccCcCCCc---cccCCCCCCCCCcEEEEcCCCCCCCCCCce-EEEEecccc
Q 043646 244 NVTGIYSDTRS---IARLLHQYGGFACFDFAASGPYV---KINLRSRNIDGYDAIFLATHKFLGGPGTPG-ILLISKALY 316 (625)
Q Consensus 244 n~TG~~~~l~~---I~~la~~~g~~vivD~A~~~g~~---~id~~~~~~~~~D~v~~S~hK~lggp~g~G-~l~v~~~~~ 316 (625)
||.+.|.++ |+++|++||+++++|+|+..... ....... ....|.++.+++|.++.+ +| +++.++++.
T Consensus 140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~-~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i 214 (333)
T PRK10534 140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEI-TQYCDSFTICLSKGLGTP--VGSLLVGNRDYI 214 (333)
T ss_pred --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHH-HhcCCEEEEEeEcCCCCc--ccceEEcCHHHH
Confidence 699988765 56788899999999998653211 1111100 013476677899999866 45 576677762
Q ss_pred ccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhh
Q 043646 317 QLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L 395 (625)
+.+.... . ...+..+..+.. .+++..+ +. ..+.+. +..+.++++.+.|
T Consensus 215 --~~~~~~~------------------------~-~~~~~~~~~~~~~a~~~~~l--~~-~~~~~~-~~~~~r~~l~~~L 263 (333)
T PRK10534 215 --KRARRWR------------------------K-MTGGGMRQAGILAAAGLYAL--KH-NVARLQ-EDHDNAAWLAEQL 263 (333)
T ss_pred --HHHHHHH------------------------H-HhCCchhhHHHHHHHHHHHH--Hh-hHHHHH-HHHHHHHHHHHHH
Confidence 2221000 0 001111222222 1222222 11 122233 3344577889999
Q ss_pred CCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChh
Q 043646 396 LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 396 ~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~ 475 (625)
.++ |++++.+. +++.|...++. +..++.+.|. +.||.+++|
T Consensus 264 ~~~-g~~~~~~~-----~nfv~~~~~~~---------------~~~~~~~~l~-~~gi~v~~~----------------- 304 (333)
T PRK10534 264 REA-GADVMRQD-----TNMLFVRVGEE---------------QAAALGEYMR-ERNVLINAS----------------- 304 (333)
T ss_pred HhC-CCccCCCC-----ceEEEEECCch---------------hHHHHHHHHH-HcCeeecCC-----------------
Confidence 887 77765432 44444433311 2457777774 579999853
Q ss_pred hHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 476 RSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
..+|++..+.+|++++++++++|+.++
T Consensus 305 ------------------~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ------------------PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ------------------ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 236888766679999999999998765
No 249
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.81 E-value=2.7e-18 Score=165.79 Aligned_cols=334 Identities=16% Similarity=0.138 Sum_probs=234.3
Q ss_pred EeccCCCCCcc-hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 79 TYADHTASGRS-LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 79 ~Yld~~~~~~~-p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
.|..++..+.. .++|.++-++.+..+...+.+.. .-.+++.+...++..||++.+.+. .+++. ++-.++.-...
T Consensus 71 nFcaNnYLGLsshPeii~a~~~aleeyGaGlssvr--fIcGtq~iHk~LE~kiAqfh~rED--~ilyp-scfdANag~fe 145 (417)
T KOG1359|consen 71 NFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVR--FICGTQDIHKLLESKIAQFHGRED--TILYP-SCFDANAGAFE 145 (417)
T ss_pred eecccccccccCChHHHHHHHHHHHHhCCCcccee--EEecchHHHHHHHHHHHHHhCCCc--eEEec-cccccchHHHH
Confidence 34445555543 47899999998888766666533 334577888999999999999752 45554 67766554433
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEE
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLG 237 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv 237 (625)
++ +.|.|. |+....+|.|.+..++... ..+++|+..|+..+.+.+ .-+.++|
T Consensus 146 -ai---------------l~pedA--vfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~-k~r~klv 197 (417)
T KOG1359|consen 146 -AI---------------LTPEDA--VFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISAC-KMRLKLV 197 (417)
T ss_pred -Hh---------------cChhhh--hhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhh-hheEEEE
Confidence 32 356774 8888999999998887632 456788989988776422 1367899
Q ss_pred EEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCC---C--CCCCCCcEEEEcCCCCCCCCCCceEEEEe
Q 043646 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLR---S--RNIDGYDAIFLATHKFLGGPGTPGILLIS 312 (625)
Q Consensus 238 ~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~---~--~~~~~~D~v~~S~hK~lggp~g~G~l~v~ 312 (625)
+.....++.|.+.|+++|.+++++||+++++|++|+.|.....-+ + ..+..+|++..+..|.+||..| |+...+
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttgp 276 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTGP 276 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccCC
Confidence 999999999999999999999999999999999998765432111 1 1134789999999999998877 898888
Q ss_pred cccccc-C-CCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q 043646 313 KALYQL-G-SSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIES 390 (625)
Q Consensus 313 ~~~~~l-~-~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~ 390 (625)
+.+..+ + +.+|+.+.. .-.|.+.+...+++++++. ...+..+.+.+.++
T Consensus 277 ~~li~llrqr~RpylFSn-------------------------slppavV~~a~ka~dllm~----s~~~i~~~~a~~qr 327 (417)
T KOG1359|consen 277 KPLISLLRQRSRPYLFSN-------------------------SLPPAVVGMAAKAYDLLMV----SSKEIQSRQANTQR 327 (417)
T ss_pred hhHHHHHHhcCCceeecC-------------------------CCChhhhhhhHHHHHHHHh----hHHHHHHHHHHHHH
Confidence 887432 1 223333110 1135566666667776632 23455666777888
Q ss_pred HHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhh
Q 043646 391 ALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLL 470 (625)
Q Consensus 391 l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l 470 (625)
+++.+.. .|+.+.+.. .||....+-+.. + ....++.|++ .||.|-+-..+..|.+
T Consensus 328 fr~~me~-aGftIsg~~----hPI~pv~lGda~--------------l-A~~~ad~lLk-~Gi~Vigfs~PvVP~g---- 382 (417)
T KOG1359|consen 328 FREFMEA-AGFTISGAS----HPICPVMLGDAR--------------L-ASKMADELLK-RGIYVIGFSYPVVPKG---- 382 (417)
T ss_pred HHHHHHh-cCceecCCC----CCccceecccHH--------------H-HHHHHHHHHh-cCceEEeecCCcCCCC----
Confidence 8887765 499988753 467766664321 1 2356667766 5999986665554432
Q ss_pred cCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 471 AFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 471 ~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.-.+|+.+...+|+||||++++++.++.+.
T Consensus 383 ----------------------kariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 383 ----------------------KARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred ----------------------ceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 256888898899999999999999987654
No 250
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.81 E-value=2.3e-17 Score=180.09 Aligned_cols=341 Identities=13% Similarity=0.050 Sum_probs=196.7
Q ss_pred HHHHHH-HHHHHHhCC--CCCC--cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH
Q 043646 122 MVHEAS-NYIKRCLGG--GQAD--AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196 (625)
Q Consensus 122 ~~~~~~-~~ia~~~g~--~~~~--~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (625)
..+++. +++.+.++. .+.+ +|++| +|++++|..++.++... ..++|||+ |++..+.|+.+..
T Consensus 133 ~~e~iv~~y~~~~~~~~~~~~~~~~V~it-~Gat~al~~~~~~l~~~----------~ll~pGD~--Vlv~~P~y~~y~~ 199 (521)
T TIGR03801 133 HSEKIVHQYLIQEMCGNKPPPGEFDLFAV-EGGTAAMCYIFDSLKAN----------ELLKKGDK--IALMTPIFTPYLE 199 (521)
T ss_pred HHHHHHHHHHHhhccCCCCCCCcCeEEEe-CCHHHHHHHHHHHHhHh----------hcCCCCCE--EEEeCCCcHHHHH
Confidence 333333 555555432 2332 68888 89999998887763100 01578996 9999999988877
Q ss_pred HHHHc--CCeEEEEecCC--C-----CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHc--
Q 043646 197 SWRQS--LAEVVEIGLDD--N-----GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQY-- 262 (625)
Q Consensus 197 ~~~~~--G~~vv~v~~~~--~-----~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~-- 262 (625)
..+.. |++++.++.+. + +.+|+++|+++++ ++++++++++|+||||.+.+ +++|+++|++|
T Consensus 200 ~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-----~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~ 274 (521)
T TIGR03801 200 IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-----PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRP 274 (521)
T ss_pred HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 66554 77888888753 2 5789999998776 68999999999999999988 67778889886
Q ss_pred CCEEEEeccCcCCC-ccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEecccc---ccCCC--------CCcccCCc
Q 043646 263 GGFACFDFAASGPY-VKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALY---QLGSS--------PPSTCGGG 329 (625)
Q Consensus 263 g~~vivD~A~~~g~-~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~---~l~~~--------~p~~~ggg 329 (625)
++++|+|++++.-. ....+... ...--+++.|++|.||.|+ .+|+++++++.. .+..+ ...+ +.-
T Consensus 275 ~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry-~~~ 352 (521)
T TIGR03801 275 DLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRY-SSL 352 (521)
T ss_pred CeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhh-ccc
Confidence 99999999976311 11111111 0012366779999998665 389999876510 01111 0000 000
Q ss_pred eEEeeccccccccccccc-------hhhhhcCCChhHHHH--HH-HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC
Q 043646 330 TVNYVNAFDEKDTLYLED-------IEERENGGTPQIVQM--IR-AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ 399 (625)
Q Consensus 330 ~v~~~~~~~~~~~~~~~~-------~~~~~~~gt~~~~~~--~~-aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~ 399 (625)
+ .+.+.-.+.+. +......|.+...+. +. ++.+++-......+.+.+..++..+.+.+.|
T Consensus 353 ~------~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L---- 422 (521)
T TIGR03801 353 T------TEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL---- 422 (521)
T ss_pred c------CChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc----
Confidence 0 00000011111 111122333333332 11 1222221111223455666666677777777
Q ss_pred cEEEeCCCCCCCcceEEEEeccCCCCCCccccccC--CCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 400 NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIER--NKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 400 gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~--~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
|+.+... ...++.+.|.-.+.......+..... ....+..+++..|.++.||.+.+|..|+.+
T Consensus 423 g~~~~~~--~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~------------- 487 (521)
T TIGR03801 423 GLPLQED--PNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP------------- 487 (521)
T ss_pred CCCCcCC--CCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC-------------
Confidence 3322111 12445555554432100000000000 001135678888888999999999887621
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.+++|||+.. .+++++..+.+.|++++.+.
T Consensus 488 ---------------~~~vRisla~-l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 488 ---------------EWSVRVSLAN-LNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred ---------------CCeEEEEecC-CCHHHHHHHHHHHHHHHHHH
Confidence 3679999952 57889999999999887653
No 251
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.80 E-value=2.8e-17 Score=177.68 Aligned_cols=160 Identities=19% Similarity=0.212 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH-
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW- 198 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~- 198 (625)
....+++++.+++++|.+ ..+++++|+.+ +..++.++ +++||+ |+++...|++....+
T Consensus 56 ~p~~~~le~~lA~l~g~~---~~v~~~sG~~A-i~~al~~l---------------~~~Gd~--Vl~~~~~y~~t~~~~~ 114 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGV---AALAVASGQAA-ITYAILNL---------------AQAGDN--IVSSSYLYGGTYNLFK 114 (418)
T ss_pred ChhHHHHHHHHHHHhCCC---eEEEEccHHHH-HHHHHHHH---------------hCCCCE--EEEECCCcHHHHHHHH
Confidence 344578999999999974 34666566665 55555444 468886 888888876654443
Q ss_pred ---HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 199 ---RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 199 ---~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
...|++++.++.+ |+++++++++ +++++|++++++||||.+.|+++|+++|+++|+++++|++++.+
T Consensus 115 ~~~~~~G~~v~~v~~~-----d~~~l~~~l~-----~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~ 184 (418)
T TIGR01326 115 HTLKRLGIEVRFVDPD-----DPEEFEKAID-----ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATP 184 (418)
T ss_pred HHHHHcCcEEEEECCC-----CHHHHHHhcC-----cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchh
Confidence 4579999998853 8999999987 57999999999999999999999999999999999999998876
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEecc
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLISKA 314 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~~~ 314 (625)
.....+ .. ++|+++.|++|++++++. +|++++++.
T Consensus 185 ~~~~~l-~~---g~Divv~S~sK~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 185 YLCRPI-DH---GADIVVHSATKYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred hcCCch-hc---CCeEEEECccccccCCccceEEEEEecc
Confidence 432222 22 789999999999987654 788888653
No 252
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.80 E-value=9.8e-17 Score=173.18 Aligned_cols=348 Identities=14% Similarity=0.093 Sum_probs=205.1
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+....|+ .|+|..+. |-.++.|.+++.+.+..... .+. . ...+..+++++.++++++. +
T Consensus 22 G~~~~d~dg~---~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~~~-~-----~~~~~~~~~~~~l~~~~~~--~ 89 (400)
T PTZ00125 22 GVFVWDVEGK---KYYDFLSAYSAVNQGHCHPKILAALINQAQKLTL-TSR-A-----FYNDVLGLAEKYITDLFGY--D 89 (400)
T ss_pred cCEEEeCCCC---EEEEcccCHhhccCCcCCHHHHHHHHHHHHhccc-ccc-c-----ccCHHHHHHHHHHHhCCCC--C
Confidence 3445555453 37776432 33578999999988753211 111 0 0134667888888888875 2
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEE---EecCC----
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVE---IGLDD---- 212 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~---v~~~~---- 212 (625)
.++|++||+.++...+-.++..... + .++..+.+.+|......|......+...+..... .+...
T Consensus 90 -~~~~~~SGs~A~e~al~~~~~~~~~---~----~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (400)
T PTZ00125 90 -KVLPMNSGAEAGETALKFARKWGYE---V----KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFEL 161 (400)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHHHh---c----cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceE
Confidence 6888889988855555433210000 0 0011122334555556666665555443321100 01000
Q ss_pred CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCcc----ccCCC
Q 043646 213 NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVK----INLRS 283 (625)
Q Consensus 213 ~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~----id~~~ 283 (625)
-...|+++|+++++. +++++|+++.++|+||.+.| +++|.++|++||+++|+|++++ +|... .+...
T Consensus 162 ~~~~d~~~le~~l~~----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~ 237 (400)
T PTZ00125 162 VDYNDVEALEKLLQD----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEG 237 (400)
T ss_pred eCCCCHHHHHHHhCC----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcC
Confidence 012389999998862 47999999999999999988 9999999999999999999975 33211 11122
Q ss_pred CCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHH
Q 043646 284 RNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM 362 (625)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 362 (625)
. .+|++++| |+++++. .+|++++++++. +.+.+...+ .+ ..++|....+
T Consensus 238 ~---~pd~~~~s--K~l~~g~~~ig~v~~~~~~~--~~~~~~~~~-~t----------------------~~~~~~~~~a 287 (400)
T PTZ00125 238 V---KPDIVLLG--KALSGGLYPISAVLANDDVM--LVIKPGEHG-ST----------------------YGGNPLACAV 287 (400)
T ss_pred C---CCCEEEEc--ccccCCCcCcEEEEEcHHHH--hhccCCCCC-CC----------------------CCcCHHHHHH
Confidence 2 46888766 9998654 689999998873 333221100 00 1233333333
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 363 IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
+.++++++. ..+ +.++.+++.+++++.|.++ +.+....+ .+.++.+.+..+. ..
T Consensus 288 a~~~l~~i~--~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~----~g~~~~v~~~~~~-------------~~ 345 (400)
T PTZ00125 288 AVEALEVLK--EEK---LAENAQRLGEVFRDGLKELLKKSPWVKEIRG----KGLLNAIVFDHSD-------------GV 345 (400)
T ss_pred HHHHHHHHH--hcC---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEec----ccEEEEEEEccCc-------------ch
Confidence 345555542 222 3345555566666666543 32222211 2334444332111 12
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
....+++.|.+ +||.+.++ .++++||++++.++++|+++++++|++
T Consensus 346 ~~~~~~~~l~~-~Gv~v~~~---------------------------------~~~~lRi~~~~~~~~~~i~~~l~~l~~ 391 (400)
T PTZ00125 346 NAWDLCLKLKE-NGLLAKPT---------------------------------HDNIIRFAPPLVITKEQLDQALEIIKK 391 (400)
T ss_pred HHHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 34578888865 69998643 137899999999999999999999998
Q ss_pred HHHhh
Q 043646 519 IAAYG 523 (625)
Q Consensus 519 ~~~~~ 523 (625)
++.+.
T Consensus 392 ~l~~~ 396 (400)
T PTZ00125 392 VLKSF 396 (400)
T ss_pred HHHHH
Confidence 87653
No 253
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=4.7e-18 Score=164.58 Aligned_cols=293 Identities=15% Similarity=0.203 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH--H-H
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS--W-R 199 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~--~-~ 199 (625)
..++++++|+++|-+.. +|+.|||..++..++..+ -++|.+ |++.+..|...... + .
T Consensus 58 t~rLE~~vA~l~GKEAg---LFv~SGTmgNllaIm~Hc---------------~~rg~e--ii~gd~~HI~~~E~gg~s~ 117 (384)
T KOG1368|consen 58 TNRLEQRVAELFGKEAG---LFVPSGTMGNLLAIMVHC---------------HQRGSE--IIVGDRAHIHRYEQGGISQ 117 (384)
T ss_pred HHHHHHHHHHHhCccce---eeecccccccHHHHHHHh---------------cCCCce--EEeccchheeehhccChhh
Confidence 35688999999998755 777799999988887766 357775 99999999776543 2 2
Q ss_pred HcCCeEEEEecCCCCCCCHHHHHHHHHH---hhhCCCCeEEEEecccCccc-cccCHH---HHHHHHHHcCCEEEEeccC
Q 043646 200 QSLAEVVEIGLDDNGLLDIEALRSQLEL---YKAAKRPMLGSFSACSNVTG-IYSDTR---SIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 200 ~~G~~vv~v~~~~~~~ld~~~L~~~l~~---~~~~~~~~lv~~~~~~n~TG-~~~~l~---~I~~la~~~g~~vivD~A~ 272 (625)
..|+.++.+...++|.+|++++++++.. +.+.+-|++|++.+.+|.+| .+.|++ +|.++|++||+-+|.|+|-
T Consensus 118 l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGAR 197 (384)
T KOG1368|consen 118 LAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGAR 197 (384)
T ss_pred hccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhh
Confidence 3578888888888999999999999983 23445689999999999988 888875 5678999999999999982
Q ss_pred ---cCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchh
Q 043646 273 ---SGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIE 349 (625)
Q Consensus 273 ---~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (625)
+.-...+.++.+. ..+|.+..+++|.+|.|-| ++++.++++..-...-....|||.
T Consensus 198 i~NAavasgV~vk~i~-~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~RKalGGGm------------------- 256 (384)
T KOG1368|consen 198 IFNAAVASGVPVKKIC-SAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFRKALGGGM------------------- 256 (384)
T ss_pred hhhHHHHcCCCHHHHH-HhhhhhhhhhhccCCCCcc-cEEEccHHHHHHHHHHHHHhcCch-------------------
Confidence 2112233333321 2579999999999999997 788889888431111111233332
Q ss_pred hhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 350 ERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 350 ~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
--.+++ ++++..+ + .... ..++.++++..+.+.+...+++++-.+. ....++...+ ..
T Consensus 257 --------RQsGvLaaaaLval--~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a--~etNiv~~~l-~q------ 315 (384)
T KOG1368|consen 257 --------RQSGVLAAAALVAL--D-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPA--VETNIVNMVL-CQ------ 315 (384)
T ss_pred --------hHHHHHHHHHHHHh--h-cchH-HHHHHHHHHHHHHHHhccccceeeecch--hhcceeeeec-cc------
Confidence 112232 3333333 2 1222 3445566677777788777778876552 1233443333 21
Q ss_pred cccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 429 NMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 429 ~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
..++..++++.+ +++||.+.+|.. ..+|+.+++-.|+++
T Consensus 316 -------~~~~~~~l~~~~-~k~gi~lm~~~s---------------------------------~r~Rivlh~Qvt~~~ 354 (384)
T KOG1368|consen 316 -------ARLTAEELCKFL-EKNGILLMGGAS---------------------------------RRIRIVLHHQVTDED 354 (384)
T ss_pred -------ccCCHHHHHHHH-HHCCeEEeeccc---------------------------------cceEEEEEEecCHHH
Confidence 246788999999 568999986532 448999999999999
Q ss_pred HHHHHHHHHH
Q 043646 509 FEFILAALEF 518 (625)
Q Consensus 509 id~ll~aL~~ 518 (625)
++.++..+.+
T Consensus 355 ve~~~~~~~k 364 (384)
T KOG1368|consen 355 VEYVKSVLSK 364 (384)
T ss_pred HHHHHHHHHH
Confidence 9999999954
No 254
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=7.3e-18 Score=180.54 Aligned_cols=163 Identities=16% Similarity=0.058 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH
Q 043646 117 QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196 (625)
Q Consensus 117 ~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (625)
+......+++++.+++++|.+ .++++ +|+++++..++.++ +++||+ |+++.+.|..+..
T Consensus 61 r~~~pt~~~Le~~lA~l~g~~---~~l~~-~sgt~Ai~~~l~al---------------~~~GD~--Vl~~~~~y~~~~~ 119 (394)
T PRK07050 61 LHATPTSLALAQRLAEIEGGR---HALLQ-PSGLAAISLVYFGL---------------VKAGDD--VLIPDNAYGPNRD 119 (394)
T ss_pred CCCCHHHHHHHHHHHHHhCCC---eEEEe-ccHHHHHHHHHHHH---------------hCCCCE--EEEecCCcccHHH
Confidence 333445678999999999964 57887 67777788887776 578996 9999999988764
Q ss_pred H----HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccC
Q 043646 197 S----WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 197 ~----~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~ 272 (625)
. .+..|++++.++.. +.++++++++ ++|++|++++|+||+|.+.|+++|+++||++|+++++|+++
T Consensus 120 ~~~~~~~~~Gi~v~~vd~~-----~~~~l~~~i~-----~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~ 189 (394)
T PRK07050 120 HGEWLARDFGITVRFYDPL-----IGAGIADLIQ-----PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTY 189 (394)
T ss_pred HHHHHHHhcCeEEEEECCC-----CHHHHHHhcC-----CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCc
Confidence 3 34569999888743 4577888887 68999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEecc
Q 043646 273 SGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKA 314 (625)
Q Consensus 273 ~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~ 314 (625)
+.|...-.+ .. |+|+++.|++|+++|..+ .|+++++++
T Consensus 190 a~~~~~~~l-~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~ 229 (394)
T PRK07050 190 SAGLAFKPF-EH---GVDISVQALTKYQSGGSDVLMGATITADA 229 (394)
T ss_pred ccccccCHH-Hc---CCeEEEEECCceecCCCCeeEEEEEECCH
Confidence 887642222 22 789999999999987654 466666543
No 255
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.80 E-value=2.3e-17 Score=180.37 Aligned_cols=360 Identities=13% Similarity=0.092 Sum_probs=207.7
Q ss_pred cchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHH-HHHHHhCC--CC--CCcEEEeCChHHHHHHHHHHHhcc
Q 043646 88 RSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASN-YIKRCLGG--GQ--ADAIIFCGAGTTAAIKRLQEVMGI 162 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~-~ia~~~g~--~~--~~~vift~sGttaal~~l~~~l~~ 162 (625)
++|+.+.+++ +.+.. + .|....+..++.+++.+ ++.+.++. .+ +++|++| +|++++|..++.++..
T Consensus 113 ~~~~~v~e~~-~~~~~---~----~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT-~Ga~~al~~~~~aL~~ 183 (527)
T PRK09275 113 DADEFVYELV-DGIIG---D----NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAV-EGGTAAMCYIFDSLKE 183 (527)
T ss_pred CCCHHHHHHH-HHHhc---C----CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEe-CCHHHHHHHHHHHHhh
Confidence 4467777754 44421 1 12223334555565555 33333322 22 2378888 8999999888776310
Q ss_pred cccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC--CeEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEE
Q 043646 163 TVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL--AEVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGS 238 (625)
Q Consensus 163 ~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G--~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~ 238 (625)
. ..++|||+ |+++.+.|+.+....+..| ++++.++.++ ++.+|+++|+++++ +++++++
T Consensus 184 ~----------~ll~pGD~--Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-----~~tkai~ 246 (527)
T PRK09275 184 N----------GLLKAGDK--IALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-----PSIKALF 246 (527)
T ss_pred h----------hcCCCCCE--EEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-----CCCCEEE
Confidence 0 01589996 9999999999887777665 4555565543 35799999999876 6899999
Q ss_pred EecccCccccccC---HHHHHHHHHH--cCCEEEEeccCcCCC-ccccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEE
Q 043646 239 FSACSNVTGIYSD---TRSIARLLHQ--YGGFACFDFAASGPY-VKINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLI 311 (625)
Q Consensus 239 ~~~~~n~TG~~~~---l~~I~~la~~--~g~~vivD~A~~~g~-~~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v 311 (625)
+++|+||||.+.+ +++|+++|++ +++++|+|++++.-. ....+... ...--+++.|++|.|+.|+ .+|++++
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~ 325 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIAL 325 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhc
Confidence 9999999999988 6778888854 599999999965311 11111110 0122467779999998554 3899998
Q ss_pred ecc-----ccccCCCC-------CcccCCceEEeeccccccccccc-------cchhhhhcCCChhHHHHHHH---HHHH
Q 043646 312 SKA-----LYQLGSSP-------PSTCGGGTVNYVNAFDEKDTLYL-------EDIEERENGGTPQIVQMIRA---ALAF 369 (625)
Q Consensus 312 ~~~-----~~~l~~~~-------p~~~ggg~v~~~~~~~~~~~~~~-------~~~~~~~~~gt~~~~~~~~a---al~~ 369 (625)
+++ + +..++ ...++.-+. ....-.+. ..+......|.+...+...+ ..++
T Consensus 326 ~~~~v~~~~--i~~l~~~~~~~~~~ry~~~~~------~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~al 397 (527)
T PRK09275 326 HEDNVFDKL--IAKLPEEKKKELDKRYSSLTT------DPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL 397 (527)
T ss_pred CchhHHHHH--HHhccHHHHHHHHhhhhhccC------CcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 876 2 11110 000000000 00000000 01111223344444443211 1222
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC--------CCCChH
Q 043646 370 WVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN--------KPLHGP 441 (625)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~--------~~l~~~ 441 (625)
+.......+...+..+..++.+.+.|. + .+.... ..++.+.|.-....... ..+ ...+..
T Consensus 398 l~~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~----p~g~fY~~~di~~~~~~------~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 398 LDEEDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDP----NNAAYYTLIDLEEWAEK------NYGKEFADYLKKNYSPV 465 (527)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCC----CCeeEEEEEEhHHhhhh------ccCchhhhhhhccCCHH
Confidence 211111234556666666777777772 1 111111 24455555543321000 000 012466
Q ss_pred HHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 442 FVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 442 ~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
+++..|.++.||.+.+|..|+. .++++|||+. ..+++++..+.+.|++++.
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~----------------------------~~~~vRis~a-~~~~~~~~~~~~rl~~~l~ 516 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGG----------------------------PEWSVRVSLA-NLNEEDYAKIGKAIRKLLD 516 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCC----------------------------CCCeEEEEEe-cCCHHHHHHHHHHHHHHHH
Confidence 7888888999999999988752 1478999995 2478999999999998886
Q ss_pred hh
Q 043646 522 YG 523 (625)
Q Consensus 522 ~~ 523 (625)
+.
T Consensus 517 ~y 518 (527)
T PRK09275 517 EY 518 (527)
T ss_pred HH
Confidence 64
No 256
>PRK07049 methionine gamma-lyase; Validated
Probab=99.80 E-value=2.3e-17 Score=178.36 Aligned_cols=309 Identities=14% Similarity=0.083 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH----
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW---- 198 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~---- 198 (625)
...+++.|+++.|.+ +++++++|+. ++..++.++ +++||. |+++.+.|..+...+
T Consensus 85 ~~~Le~~lA~leg~~---~~iv~~sG~~-Ai~~~l~al---------------~~~Gd~--Vv~~~p~Y~~~~~~~~~~l 143 (427)
T PRK07049 85 SEIVEDRLAVYEGAE---SAALFSSGMS-AIATTLLAF---------------VRPGDV--ILHSQPLYGGTETLLAKTF 143 (427)
T ss_pred HHHHHHHHHHHhCCC---cEEEEccHHH-HHHHHHHHH---------------hCCCCE--EEEcCCCcccHHHHHHHHH
Confidence 456889999999864 3455556776 577776666 578985 888888888775443
Q ss_pred HHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHH------cCCEEEEeccC
Q 043646 199 RQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ------YGGFACFDFAA 272 (625)
Q Consensus 199 ~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~------~g~~vivD~A~ 272 (625)
...|++++.++. ..|++++++++.+....+++++|++++|+||||.+.|+++|.++++. +++++++|++.
T Consensus 144 ~~~Gi~~v~~~~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety 219 (427)
T PRK07049 144 RNFGVGAVGFAD----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTL 219 (427)
T ss_pred HhcCcEEEEEeC----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCc
Confidence 456888777762 24778888877532222479999999999999999999999999988 89999999996
Q ss_pred cCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 273 SGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 273 ~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
+.+.....+ .. +.|+++.|++|+++|..| +|+++.++++. +.+... ..
T Consensus 220 ~~~~~~~pl-~~---g~divv~S~SK~~gG~~glr~G~vv~~~~l~--~~l~~~------------------------~~ 269 (427)
T PRK07049 220 LGPVFQKPL-EH---GADLSVYSLTKYVGGHSDLVAGAVLGRKALI--RQVRAL------------------------RS 269 (427)
T ss_pred cccccCCcc-cc---CCCEEEEcCceeecCCCCcEEEEEECCHHHH--HHHHHH------------------------HH
Confidence 544322222 22 679999999999997543 68888776652 111100 00
Q ss_pred hhcCCChhHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCC----C-----------CCCcc
Q 043646 351 RENGGTPQIVQM-IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNT----S-----------VKRQA 413 (625)
Q Consensus 351 ~~~~gt~~~~~~-~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~----~-----------~~~~~ 413 (625)
.+..+..+..+. +..+++ ......++..+.+..+.+.|++.|+++ |+.|. + ...++
T Consensus 270 ~~g~~ls~~~a~l~~r~L~-------tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~ 342 (427)
T PRK07049 270 AIGTQLDPHSCWMLGRSLE-------TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGS 342 (427)
T ss_pred hcCCCCCHHHHHHHHcCCC-------hHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCcc
Confidence 011111222221 111111 233334455667888999999888774 44331 1 12366
Q ss_pred eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCCC
Q 043646 414 ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYLG 490 (625)
Q Consensus 414 i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~g 490 (625)
+++|.+..+.. ....+.+.| +.+.+.+.-|...+. |.......+..+... -.|
T Consensus 343 ~~s~~~~~~~~--------------~~~~f~~~l-~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~---------~~g 398 (427)
T PRK07049 343 TFSFDIKGGQA--------------AAFRFLNAL-QIFKLAVSLGGTESLASHPASMTHSGVPADVRE---------RIG 398 (427)
T ss_pred EEEEEEcCCHH--------------HHHHHHHcC-cccEEcccCCCCCceeeCCCccccccCCHHHHH---------hcC
Confidence 88888743210 023455555 344544444433221 111111122221111 256
Q ss_pred CCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 491 VKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 491 ~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
+.++.||||+|. ||++.|++-|++.++
T Consensus 399 i~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 399 VLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred CCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 778999999996 566667666666554
No 257
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=7.2e-17 Score=173.33 Aligned_cols=330 Identities=15% Similarity=0.135 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL 202 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G 202 (625)
..++++.+++++|.+ .+++| +|.++++..++.++ ++|||. | ++.+.+.+....+...|
T Consensus 55 ~~~Leeaia~~~g~~---~vv~t-~~Gt~Al~la~~al---------------~~pGD~--V-~~~~~f~~~~~~i~~~G 112 (431)
T cd00617 55 FYDLEDAVQDLFGFK---HIIPT-HQGRGAENILFSIL---------------LKPGRT--V-PSNMHFDTTRGHIEANG 112 (431)
T ss_pred HHHHHHHHHHHHCCC---eEEEc-CCHHHHHHHHHHHh---------------CCCCCE--E-ccCCcccchHHHHHhCC
Confidence 456888899999985 67888 56677777777766 578983 5 56666777777788899
Q ss_pred CeEEEEecCC----------CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc-ccccC---HHHHHHHHHHcCCEEEE
Q 043646 203 AEVVEIGLDD----------NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT-GIYSD---TRSIARLLHQYGGFACF 268 (625)
Q Consensus 203 ~~vv~v~~~~----------~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T-G~~~~---l~~I~~la~~~g~~viv 268 (625)
++++.+++++ .+.+|+++|+++|++. ...++++|+++.++|++ |...+ +++|.++|++||+++|.
T Consensus 113 a~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~-~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~ 191 (431)
T cd00617 113 AVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV-GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVL 191 (431)
T ss_pred CEeEEEecccccccccccCCCCCcCHHHHHHHhCcc-cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999999863 2569999999999831 11248899999999998 88876 46789999999999999
Q ss_pred eccCcCC-----------CccccCCCC--C-CCCCcEEEEcCCCCCCCCCCceEEEEecc-ccccCCCCCcccCCceEEe
Q 043646 269 DFAASGP-----------YVKINLRSR--N-IDGYDAIFLATHKFLGGPGTPGILLISKA-LYQLGSSPPSTCGGGTVNY 333 (625)
Q Consensus 269 D~A~~~g-----------~~~id~~~~--~-~~~~D~v~~S~hK~lggp~g~G~l~v~~~-~~~l~~~~p~~~ggg~v~~ 333 (625)
|+|++.. +....+.+. . ....|.+++|++|-+++|.| |+++.+++ ++. .++.... .+
T Consensus 192 DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~--~~~~~~~-----~~ 263 (431)
T cd00617 192 DAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYE--EARQRVV-----LY 263 (431)
T ss_pred EchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHH--HHHHhcc-----cc
Confidence 9997643 222222111 0 12579999999999887875 88998874 532 2110000 00
Q ss_pred eccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcc
Q 043646 334 VNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQA 413 (625)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~ 413 (625)
+.....|..+..... +++..+.+..-.+.+.++.. .++++.+.|.+. |+.+..|. ++
T Consensus 264 ---------------~~~~~~gG~~~r~~~--A~A~gL~e~~~~~~l~~~~~-~r~~l~~~L~~~-G~~v~~P~----Gg 320 (431)
T cd00617 264 ---------------EGFVTYGGMAGRDME--ALAQGLREAVEEDYLRHRVE-QVRYLGDRLDEA-GVPIVEPA----GG 320 (431)
T ss_pred ---------------CCccccccccHHHHH--HHHHHHHhcccHHHHHHHHH-HHHHHHHHHHHC-CCCccCCC----cc
Confidence 000112222333322 22222112111334444444 468888999887 77777663 45
Q ss_pred eEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeec-CCCCCc--hhhHhhhcCChhhHHHHHHHHHhCCCC
Q 043646 414 ILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARG-GCACAG--PYGHTLLAFDQTRSLEIRSAIQKGYLG 490 (625)
Q Consensus 414 i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~-G~~~~~--~~~~~~l~~~~~~~~~~~~~~~~g~~g 490 (625)
+..|.-....... .......+..++..|..+.||.+.. |....+ |.+.... .
T Consensus 321 h~v~~d~~~~~~~------~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~-------------------~ 375 (431)
T cd00617 321 HAVFIDAREFLPH------IPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENK-------------------Y 375 (431)
T ss_pred eEEEEEhHHhcCC------CCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCccc-------------------C
Confidence 5555543321000 0011234667887777889998642 332110 1000000 0
Q ss_pred CCCcEEEEecC-CCCCHHHHHHHHHHHHHHHHhhhhcccCccc
Q 043646 491 VKPGWTRITFP-YYMSNEEFEFILAALEFIAAYGHRFLPLYHF 532 (625)
Q Consensus 491 ~~~g~iRis~~-~~~t~edid~ll~aL~~~~~~~~~~~~~y~~ 532 (625)
-....+|+.++ .--|.+++|.+.++|..++++... ++-|.|
T Consensus 376 ~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~ 417 (431)
T cd00617 376 PELELVRLAIPRRVYTQDHMDYVAAAVIALYERRED-IRGLRI 417 (431)
T ss_pred CccceeEEeccccccCHHHHHHHHHHHHHHHhhHhh-CCCeEE
Confidence 01377999996 345899999999999999988543 334433
No 258
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=2.9e-17 Score=175.95 Aligned_cols=242 Identities=15% Similarity=0.106 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH
Q 043646 119 MTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW 198 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~ 198 (625)
...+..+++.++++++|.+.-...+++++||..++.+++.+++.. -.+++ .|+++...|.|..+++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~------------~~~gd--~VI~p~~th~S~~kAi 168 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK------------RPKAK--YVIWPRIDQKSCIKAI 168 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc------------CCCCC--EEEEECcChHHHHHHH
Confidence 466788899999999999743346676444434666665555311 01455 4889999999999999
Q ss_pred HHcCCeEEEEec--C-CCCCCCHHHHHHHHHHhhhCCCCeEEEEeccc-CccccccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 199 RQSLAEVVEIGL--D-DNGLLDIEALRSQLELYKAAKRPMLGSFSACS-NVTGIYSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 199 ~~~G~~vv~v~~--~-~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~-n~TG~~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
...|++++.|++ + ++..+|+++|+++|++. .+++.++++..++ +.+|..+|+++|+++|++||+|+|+|+|++.
T Consensus 169 ~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~--~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~ 246 (444)
T TIGR03531 169 STAGFEPRVIETVLDGDELTTDVEDIERAIEEI--GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGL 246 (444)
T ss_pred HHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhc--cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcC
Confidence 999999999995 3 35789999999999831 1145555555443 4556889999999999999999999999987
Q ss_pred CCccc-cC--CCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhh
Q 043646 275 PYVKI-NL--RSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEER 351 (625)
Q Consensus 275 g~~~i-d~--~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~ 351 (625)
+.... .+ .....+.+|++++|+||++..|++.|+++++++-. .+.+.+.+.+ +
T Consensus 247 ~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el-~~~i~~~y~g-----------------------~ 302 (444)
T TIGR03531 247 QSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENF-IQEISKSYPG-----------------------R 302 (444)
T ss_pred cChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHH-HHHHHHhccC-----------------------C
Confidence 55332 11 11111247999999999999888767776754431 2222111110 0
Q ss_pred hcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC---cEEEeC
Q 043646 352 ENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ---NIQVLG 405 (625)
Q Consensus 352 ~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~---gv~v~~ 405 (625)
. .+++ .. .+.+.+......|++.+.++..++++++.+.|.++. |-+++.
T Consensus 303 ~-~~s~--~~--~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~ 354 (444)
T TIGR03531 303 A-SASP--SL--DVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLD 354 (444)
T ss_pred C-CChH--HH--HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeec
Confidence 0 1111 11 122222222445677888888888999999987652 455653
No 259
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.79 E-value=1.2e-17 Score=180.25 Aligned_cols=297 Identities=14% Similarity=0.090 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHhC--CCCCCcEEE--eCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 119 MTKMVHEASNYIKRCLG--GGQADAIIF--CGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g--~~~~~~vif--t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
..++.+.+.+++.+..+ .+++ +|++ | .|++.++..+..++.. .++|||+ |++..+.|+.+
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~-~v~~~~t-~G~~~al~~~~~~l~~------------~~~~Gd~--Vlv~~P~y~~~ 137 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEK-RIATVQA-LSGTGALRLGFEFLKR------------FLPAGTT--VYVSNPTWPNH 137 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccC-eEEEeec-cCcchHHHHHHHHHHH------------hcCCCCE--EEEcCCCchhH
Confidence 34444444444433222 2334 6773 6 6777777766543210 1578986 99999999999
Q ss_pred HHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEe
Q 043646 195 LLSWRQSLAEVVEIGLD--DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFD 269 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~--~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD 269 (625)
...++..|++++.+++. .++.+|++.+++++.+. .++++++++++++||||.+.+ +++|+++|++||+++++|
T Consensus 138 ~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~--~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D 215 (404)
T PTZ00376 138 VNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA--PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFD 215 (404)
T ss_pred HHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 98999999999999984 24689999999998631 135688889999999999977 566788899999999999
Q ss_pred ccCcCCCcc------ccCCCCCCCC-CcEEEEcCCCCCCCCC-CceEEE---Eeccccc--cCCCCCcccCCceEEeecc
Q 043646 270 FAASGPYVK------INLRSRNIDG-YDAIFLATHKFLGGPG-TPGILL---ISKALYQ--LGSSPPSTCGGGTVNYVNA 336 (625)
Q Consensus 270 ~A~~~g~~~------id~~~~~~~~-~D~v~~S~hK~lggp~-g~G~l~---v~~~~~~--l~~~~p~~~ggg~v~~~~~ 336 (625)
+++..-... ..+..+.... --+++.|++|.|+.|+ .+|+++ .++++.. ...+..
T Consensus 216 e~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~------------- 282 (404)
T PTZ00376 216 MAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKL------------- 282 (404)
T ss_pred hhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHH-------------
Confidence 995421110 0111110001 1366779999998554 489984 3443310 000000
Q ss_pred ccccccccccchhhhhcCCChh-HHHHHHHHHHHHHHhh-------cCHHHHHHHHHHHHHHHHHhhCCCC---cEEEeC
Q 043646 337 FDEKDTLYLEDIEERENGGTPQ-IVQMIRAALAFWVKEY-------IGYEVIKKQEDVYIESALGRILPNQ---NIQVLG 405 (625)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~gt~~-~~~~~~aal~~~~~~~-------~g~~~i~~~~~~l~~~l~~~L~~l~---gv~v~~ 405 (625)
..+...+.++ +.+. ++..++ .+. .-.+.++++.++.++.+.+.|.++. +++++.
T Consensus 283 ------------~~~~~~~~~~~~~q~--~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~ 347 (404)
T PTZ00376 283 ------------IIRPMYSSPPIHGAR--IADRIL-SDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHII 347 (404)
T ss_pred ------------HHhhhcCCCchHHHH--HHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 0001112222 2221 112222 110 0122344566677788888887652 233333
Q ss_pred CCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHH
Q 043646 406 NTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQ 485 (625)
Q Consensus 406 ~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 485 (625)
+ .++.+.|.-. ..++++.|.+++||.+.+|
T Consensus 348 p----~gg~f~~~~~-------------------~~~~~~~L~~~~~v~v~p~--------------------------- 377 (404)
T PTZ00376 348 N----QIGMFSFTGL-------------------TKEQVERLIEKYHIYLLDN--------------------------- 377 (404)
T ss_pred c----CceEEEecCC-------------------CHHHHHHHHHhCCEeecCC---------------------------
Confidence 3 2344443322 2367888888889988632
Q ss_pred hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 486 KGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 486 ~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+ |||++. .+.++++.++++|++++..
T Consensus 378 --------~--Ris~~~-~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 378 --------G--RISVAG-LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred --------C--eEEEec-cCHHhHHHHHHHHHHHHhc
Confidence 3 999954 6889999999999988653
No 260
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=1.2e-17 Score=177.44 Aligned_cols=162 Identities=16% Similarity=0.092 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH
Q 043646 117 QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196 (625)
Q Consensus 117 ~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (625)
+......+.+++.++.+-+.. + .++++ +| ++++..++.++ +++||+ |+++...|+++..
T Consensus 60 R~gnPt~~~Le~~la~le~~~-~-~v~~s-SG-~aAi~~~l~al---------------l~~GD~--Vlv~~~~Y~~~~~ 118 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGSA-G-TILVP-SG-LAAVTVPFLGF---------------LSPGDH--ALIVDSVYYPTRH 118 (395)
T ss_pred CCCChHHHHHHHHHHHHhCCC-C-EEEEC-cH-HHHHHHHHHHh---------------cCCCCE--EEEccCCcHHHHH
Confidence 334455677888998887754 2 45554 65 56677777666 689996 9998888888764
Q ss_pred H----HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccC
Q 043646 197 S----WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 197 ~----~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~ 272 (625)
. .+..|++++.++.+ +.+.++++++ ++|++|++++|+||+|.+.|+++|+++||++|+++++|+++
T Consensus 119 l~~~~l~~~Gi~v~~vd~~-----~~e~l~~al~-----~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~ 188 (395)
T PRK05967 119 FCDTMLKRLGVEVEYYDPE-----IGAGIAKLMR-----PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTW 188 (395)
T ss_pred HHHHHHHhcCeEEEEeCCC-----CHHHHHHhcC-----cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCc
Confidence 3 35579999988643 4577888887 68999999999999999999999999999999999999998
Q ss_pred cCCC--ccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccc
Q 043646 273 SGPY--VKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKAL 315 (625)
Q Consensus 273 ~~g~--~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~ 315 (625)
+.+. .+++ + |+|+++.|..|+++|-.. .|+++.+++.
T Consensus 189 a~p~~~~pl~---~---GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~ 229 (395)
T PRK05967 189 ATPLYFRPLD---F---GVDISIHAATKYPSGHSDILLGTVSANEKC 229 (395)
T ss_pred cCceecChhH---c---CCCEEEEecccccCCCCCeeEEEEEcCHHH
Confidence 8763 2333 3 899999999999876443 4655555443
No 261
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.79 E-value=7.3e-17 Score=175.07 Aligned_cols=314 Identities=14% Similarity=0.055 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhH
Q 043646 119 MTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNL 195 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~ 195 (625)
..++.+.+.+++++..|. +++ +|++| +|++++|..++.++.-.. ...+||+ |++ ..++|+.+.
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~-~I~it-~Ga~~al~~~~~~l~~~~----------~~~~gd~--v~i~~~P~y~~y~ 141 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQ-NIALT-NGSQSAFFYLFNLFAGRR----------ADGSLKK--ILFPLAPEYIGYA 141 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChh-hEEEc-cChHHHHHHHHHHHhccc----------cCCCCCe--EEEecCCCchhhH
Confidence 445666666666666564 444 79888 899999999988872000 0024664 877 578888776
Q ss_pred HHHHHcC----CeEEEEecCCC---CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCE
Q 043646 196 LSWRQSL----AEVVEIGLDDN---GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGF 265 (625)
Q Consensus 196 ~~~~~~G----~~vv~v~~~~~---~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~ 265 (625)
......+ ..+..++++.+ ..+|+++|+ +. ++++++++++++||||.+.+ +++|+++|++|+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~ 214 (416)
T PRK09440 142 DAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-----EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIP 214 (416)
T ss_pred HHhhccCceeecccccccccccccccCCCHHHcc--cC-----CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCc
Confidence 5443222 22233344332 468998887 33 57899999999999999988 56788899999999
Q ss_pred EEEeccCcCCCccc---cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccc
Q 043646 266 ACFDFAASGPYVKI---NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 266 vivD~A~~~g~~~i---d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (625)
+|+|++++.....+ +.... ...--+++.|++|+ +.|+ .+|+++.++++. +.+...
T Consensus 215 iI~De~Y~~~~~~~~~~~~~~~-~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~--~~~~~~----------------- 273 (416)
T PRK09440 215 LLIDNAYGPPFPGIIFSEATPL-WNPNIILCMSLSKL-GLPGVRCGIVIADEEII--EALSNM----------------- 273 (416)
T ss_pred EEEeCCccccCCCcchhhcCcc-ccCCeEEEeccccc-CCCcceEEEEeCCHHHH--HHHHHH-----------------
Confidence 99999986322111 11110 01223667799996 5564 389999887762 221000
Q ss_pred cccccchhhhhcCCChhHHHHHHHHHHHHHHhhcC----HHHHHHHHHHHHHHHHHhhCCC-C--cEEEeCCCCCCCcce
Q 043646 342 TLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIG----YEVIKKQEDVYIESALGRILPN-Q--NIQVLGNTSVKRQAI 414 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g----~~~i~~~~~~l~~~l~~~L~~l-~--gv~v~~~~~~~~~~i 414 (625)
......+++.+.+.+ +..++ .+..- .+.++...++..+.+.+.|.+. + ++.+..+ .++.
T Consensus 274 -------~~~~~~~~s~~~q~~--~~~~l-~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p----~gg~ 339 (416)
T PRK09440 274 -------NGIISLAPGRLGPAI--AAEMI-ESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP----EGAI 339 (416)
T ss_pred -------HHHhccCCCcHHHHH--HHHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC----CCce
Confidence 000111222333321 12222 11110 0112232333344444555331 2 3555544 3456
Q ss_pred EEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCc
Q 043646 415 LSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPG 494 (625)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g 494 (625)
+.|...+.. .++..++.+.|. ++||.+++|..|........ +...+
T Consensus 340 fiw~~~~~~-------------~~~~~~~~~~l~-~~gV~v~pg~~F~~~~~~~~--------------------~~~~~ 385 (416)
T PRK09440 340 FLWLWFKDL-------------PITTEELYQRLK-ARGVLVVPGHYFFPGLDEDW--------------------PHAHQ 385 (416)
T ss_pred EEEEECCCC-------------CCCHHHHHHHHH-HCCEEEechHhhCCCCcccc--------------------CCcCc
Confidence 655544421 134567888774 58999999876641100000 00136
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 495 WTRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 495 ~iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
++||+++. ++++++.+++.|++++...+
T Consensus 386 ~iRis~~~--~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 386 CIRMNYVQ--DDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred eEEEEecC--CHHHHHHHHHHHHHHHHHHh
Confidence 89999973 78999999999999876543
No 262
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.78 E-value=1.6e-17 Score=176.27 Aligned_cols=306 Identities=15% Similarity=0.131 Sum_probs=186.5
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH
Q 043646 116 GQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL 195 (625)
Q Consensus 116 ~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (625)
++......+++++.++++.|.+. .++| +||+ ++|..++.++ +++||+ |+++...|....
T Consensus 59 ~r~~~P~~~~lE~~la~leg~~~--av~~-sSG~-aAi~~al~al---------------l~~GD~--Vl~~~~~yg~t~ 117 (384)
T PRK06434 59 TRWGNPTVQAFEEKYAVLENAEH--ALSF-SSGM-GAITSAILSL---------------IKKGKR--ILSISDLYGQTF 117 (384)
T ss_pred eCCCChhHHHHHHHHHHHhCCCc--EEEe-CCHH-HHHHHHHHHH---------------hCCCCE--EEEecCccchHH
Confidence 33344567778999999999852 3555 4777 6677776665 578996 777655433332
Q ss_pred ----HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEecc
Q 043646 196 ----LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 196 ----~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A 271 (625)
..+...|++++++++++...++ ++. +++++|++.+++|||+.+.|+++|+++||++| +++|.+
T Consensus 118 ~~~~~~~~~~Gi~v~fvd~~~~~~~~-------l~~----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t 184 (384)
T PRK06434 118 YFFNKVLKTLGIHVDYIDTDRLNSLD-------FDP----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDAT 184 (384)
T ss_pred HHHHHHHHhcCcEEEEECCCChhhee-------ecC----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECC
Confidence 3344579999999986422222 221 36899999999999999999999999999998 567999
Q ss_pred CcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchh
Q 043646 272 ASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIE 349 (625)
Q Consensus 272 ~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (625)
++.++..-.+. . ++|++++|.||+++|++. .|+++.+++.. ...+..
T Consensus 185 ~~s~~~~~pl~-~---gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~-~~~~~~-------------------------- 233 (384)
T PRK06434 185 FASPYNQNPLD-L---GADVVIHSATKYISGHSDVVMGVAGTNNKSI-FNNLVE-------------------------- 233 (384)
T ss_pred CCCcccCCchh-c---CCCEEEeecccccCCCCCceEEEEecCcHHH-HHHHHH--------------------------
Confidence 87766533332 2 799999999999998774 46665544321 111100
Q ss_pred hhhcCCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCCC-------CCCcceEEEEec
Q 043646 350 ERENGGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNI-QVLGNTS-------VKRQAILSFLVY 420 (625)
Q Consensus 350 ~~~~~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~~-------~~~~~i~~f~~~ 420 (625)
.+...|. .+. ..+++.. .+....+.+.++..+++..+.+.|...|.+ +|+.|.- ..-+++++|.+.
T Consensus 234 ~~~~~G~~~~~---~~A~l~~--~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 234 RRKTLGSNPDP---IQAYLAL--RGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHhcCCCCCH---HHHHHHH--hCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 0001111 111 1122222 133346666777788899999999999887 4555421 124678888874
Q ss_pred cCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC---chhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEE
Q 043646 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA---GPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTR 497 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iR 497 (625)
... ....+.+.| +.+.+.+.-|...+ .|+...+..+..+... ..|+.++.||
T Consensus 309 ~~~---------------~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~---------~~gi~~~liR 363 (384)
T PRK06434 309 SME---------------DVHKFIRNL-EIPMVAASLGGVESLITLPVETSHSSLSPEERE---------RLGISDNLVR 363 (384)
T ss_pred CHH---------------HHHHHHHhC-CcceEccCCCCCCeeeECCCccccccCCHHHHH---------hcCCCcCeEE
Confidence 210 122444444 33444444443211 1221112223222211 2577789999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 043646 498 ITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 498 is~~~~~t~edid~ll~aL~~~~ 520 (625)
||+|. ||++.|++-|++.+
T Consensus 364 lsvGl----Ed~~dLi~dl~~Al 382 (384)
T PRK06434 364 FSIGI----EDIDDLIKDIENAL 382 (384)
T ss_pred EEeCc----CCHHHHHHHHHHHh
Confidence 99996 56666666666544
No 263
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.78 E-value=5.7e-18 Score=159.19 Aligned_cols=163 Identities=20% Similarity=0.289 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH-HHHHHc
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL-LSWRQS 201 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~~ 201 (625)
+++++++++++++.+.+ .++++ +|+++++..++.++ .+++++ |+++...|++.. ..+...
T Consensus 2 ~~~~~~~l~~~~~~~~~-~~~~~-~~~t~a~~~~~~~~---------------~~~~~~--v~~~~~~~~~~~~~~~~~~ 62 (170)
T cd01494 2 LEELEEKLARLLQPGND-KAVFV-PSGTGANEAALLAL---------------LGPGDE--VIVDANGHGSRYWVAAELA 62 (170)
T ss_pred HHHHHHHHHHHcCCCCC-cEEEe-CCcHHHHHHHHHHh---------------CCCCCE--EEEeecccceehhhHHHhc
Confidence 46789999999975544 78888 47777888888876 245664 999999999988 677788
Q ss_pred CCeEEEEecCCCCCCCH--HHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc
Q 043646 202 LAEVVEIGLDDNGLLDI--EALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI 279 (625)
Q Consensus 202 G~~vv~v~~~~~~~ld~--~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i 279 (625)
|++++.++.+.++..+. +.+++... .++++++++++++|++|...|+++|+++|+++|+++|+|++++.+....
T Consensus 63 g~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~ 138 (170)
T cd01494 63 GAKPVPVPVDDAGYGGLDVAILEELKA----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPA 138 (170)
T ss_pred CCEEEEeccCCCCccchhhhhhhhccc----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccc
Confidence 99999999876543333 24444332 2579999999999999999999999999999999999999999877765
Q ss_pred ---cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEe
Q 043646 280 ---NLRSRNIDGYDAIFLATHKFLGGPGTPGILLIS 312 (625)
Q Consensus 280 ---d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~ 312 (625)
+... .++|+++.|+||+|++ .+.|+++++
T Consensus 139 ~~~~~~~---~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 139 PGVLIPE---GGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccccc---ccCCEEEEEcccccCC-CceEEEEeC
Confidence 3333 3799999999999997 557999875
No 264
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=8.4e-17 Score=162.91 Aligned_cols=341 Identities=17% Similarity=0.162 Sum_probs=226.4
Q ss_pred cchHHHHHHHHHhhCCCC--CCCCCCcchhhHHHH-HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 88 RSLRYIEDYIINNVLPFY--GNTHTSDSYVGQRMT-KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~~~-~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
-.++.|++++-..+.+.| +.|+.- |.-|.... .....+.++.+++||++-. +|--. ||+.|++......
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkR-yYgGce~VD~vE~laierak~LFga~~a-nVQPh-SGs~AN~av~~Al----- 108 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKR-YYGGCEYVDEVEELAIERAKKLFGAEYA-NVQPH-SGSQANQAVYLAL----- 108 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCcc-ccCCCeeHHHHHHHHHHHHHHHhCCCcc-ccCCC-CchHHHHHHHHHH-----
Confidence 355688898887776655 456553 33455444 4555678899999999876 56666 8999988776554
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchhHHH---HHHcC--CeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEE
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS---WRQSL--AEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGS 238 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~---~~~~G--~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~ 238 (625)
++|||. |+-.+..|...+.- ....| .+++.++++. ++.+|.|++++...+ .+||+++
T Consensus 109 -----------l~pGDt--imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e----~kPK~ii 171 (413)
T COG0112 109 -----------LQPGDT--IMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE----VKPKLII 171 (413)
T ss_pred -----------cCCCCe--EecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHH----hCCCEEE
Confidence 489996 88777666555422 22233 3677778885 689999999999886 5899887
Q ss_pred EecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEec-cccc
Q 043646 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISK-ALYQ 317 (625)
Q Consensus 239 ~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~-~~~~ 317 (625)
+-. +..-...|.+++.++|++.|+++++|.||-.|.+.-...+-....+|+++.|.||.|.||.| |+++.++ ++.
T Consensus 172 ~G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~- 247 (413)
T COG0112 172 AGG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRG-GIILTNDEELA- 247 (413)
T ss_pred ECc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCc-eEEEeccHHHH-
Confidence 643 33345689999999999999999999998766543322222123589999999999999998 8888886 442
Q ss_pred cCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 318 LGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 318 l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
..+....+-|. .|.|...-+++.+.++......+.+...+++..+++.|.+.|.+
T Consensus 248 -kkin~aVFPg~------------------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~ 302 (413)
T COG0112 248 -KKINSAVFPGL------------------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE 302 (413)
T ss_pred -HHhhhhcCCcc------------------------CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 23322121111 24454444545555554223446667778888889999999987
Q ss_pred CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhH
Q 043646 398 NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRS 477 (625)
Q Consensus 398 l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~ 477 (625)
. |+++++.-. ....+..-+. ..++++..+...| ++.||.+.-..-+..+.+.
T Consensus 303 ~-G~~vvsGgT--dnHl~lVDl~--------------~~~~~Gk~ae~~L-~~~~It~NKN~iP~D~~~p---------- 354 (413)
T COG0112 303 R-GFKVVSGGT--DNHLVLVDLR--------------SKGLTGKKAEAAL-ERAGITVNKNAIPFDPESP---------- 354 (413)
T ss_pred c-CCeEecCCc--cceEEEEEcc--------------cCCCCHHHHHHHH-HHcCEeeccCCCCCCCCCC----------
Confidence 5 899886421 1122222222 1245677777777 6689988644333222110
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCC----CCHHHHHHHHHHHHHHHHhh
Q 043646 478 LEIRSAIQKGYLGVKPGWTRITFPYY----MSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 478 ~~~~~~~~~g~~g~~~g~iRis~~~~----~t~edid~ll~aL~~~~~~~ 523 (625)
..+..|||..+.. ..++|++.+.+.|.+++...
T Consensus 355 -------------~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 355 -------------FVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred -------------CCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence 0246688887533 35889999999999888764
No 265
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.78 E-value=3.8e-16 Score=167.89 Aligned_cols=339 Identities=14% Similarity=0.078 Sum_probs=192.1
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| ..|+|..+ .|...+.|.+++.+++......... ...+...++.++++++.+. +
T Consensus 22 G~~~~d~dG---~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~la~~l~~~~~~--~ 89 (389)
T PRK01278 22 GVWLIDEDG---ERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL-------YRIPEQERLAERLVENSFA--D 89 (389)
T ss_pred cCEEEECCC---CEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccc-------cCChHHHHHHHHHHhhCCC--C
Confidence 344444444 34788654 4567789999999988643221110 1133455677888887643 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCC--ceEEEEcCCCCchhHHHHHHcCCeEEEE----ecCCC
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEE--RWVVFLGPYEHHSNLLSWRQSLAEVVEI----GLDDN 213 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd--~~~Vlv~~~~h~s~~~~~~~~G~~vv~v----~~~~~ 213 (625)
+++|+.+|+.+....+..++.. ...+|+ +..|++....|++....+...+...... +...+
T Consensus 90 -~v~~~~sGseA~~~al~~ar~~------------~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 156 (389)
T PRK01278 90 -KVFFTNSGAEAVECAIKTARRY------------HYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPG 156 (389)
T ss_pred -EEEEcCCcHHHHHHHHHHHHHH------------HHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCC
Confidence 7899877777744444333210 023443 2235555555554443433332221111 11111
Q ss_pred ----CCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccccc----CHHHHHHHHHHcCCEEEEeccCc-CCCcc--ccCC
Q 043646 214 ----GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAAS-GPYVK--INLR 282 (625)
Q Consensus 214 ----~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~----~l~~I~~la~~~g~~vivD~A~~-~g~~~--id~~ 282 (625)
...|+++++++++ +++++|+++.++|++|.+. .+++|.++|++||+++|+|+++. ++... ....
T Consensus 157 ~~~~~~~d~~~l~~~l~-----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~ 231 (389)
T PRK01278 157 FDQVPFGDIEALKAAIT-----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHE 231 (389)
T ss_pred ceEeCCCCHHHHHHhhC-----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeec
Confidence 1258999999987 5799999999999999543 58999999999999999999977 22211 1111
Q ss_pred CCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH-HH
Q 043646 283 SRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI-VQ 361 (625)
Q Consensus 283 ~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~ 361 (625)
..+. .+|+++ +.|.+++...+|++++++++. +.+.+... ....+.+++ ..
T Consensus 232 ~~~~-~pdi~t--~sK~l~~G~~ig~~~~~~~~~--~~~~~~~~------------------------~~t~~~~~~~~a 282 (389)
T PRK01278 232 WAGV-TPDIMA--VAKGIGGGFPLGACLATEEAA--KGMTPGTH------------------------GSTYGGNPLAMA 282 (389)
T ss_pred ccCC-CCCEEE--EehhccCCcceEEEEEcHHHH--hccCCCCC------------------------CCCCCccHHHHH
Confidence 1111 357655 459997433489999988772 33321110 011122222 22
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC
Q 043646 362 MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP 437 (625)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~ 437 (625)
.+.++++.+ +. +...++.+.+.+++.++|.. .+++ +... ...+..+.+.. ..
T Consensus 283 aa~a~l~~l--~~---~~~~~~~~~~~~~l~~~l~~l~~~~~~~--~~~v-~g~G~~~~i~~-~~--------------- 338 (389)
T PRK01278 283 VGNAVLDVI--LA---PGFLDNVQRMGLYLKQKLEGLVDRFPDV--IEEV-RGKGLLLGLKC-VV--------------- 338 (389)
T ss_pred HHHHHHHHH--hh---hHHHHHHHHHHHHHHHHHHHHHhhCCCc--eeeE-ecccEEEEEEE-ec---------------
Confidence 233445544 11 12334455555555555543 3321 1111 11222222222 11
Q ss_pred CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 438 LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 438 l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
+..++++.|.+ .||.+.++. .+++||++++.+++++++++++.|+
T Consensus 339 -~~~~~~~~l~~-~GV~~~p~~---------------------------------~~~lR~~p~~~~~~~~i~~~l~~l~ 383 (389)
T PRK01278 339 -PNRDLVQALRD-EGLLTVGAG---------------------------------DNVVRLLPPLIITEEEIDEALERLE 383 (389)
T ss_pred -CHHHHHHHHHH-CCeEEeecC---------------------------------CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 24578888876 499987541 3789999998899999999999999
Q ss_pred HHHHh
Q 043646 518 FIAAY 522 (625)
Q Consensus 518 ~~~~~ 522 (625)
+++.+
T Consensus 384 ~~l~~ 388 (389)
T PRK01278 384 RAAES 388 (389)
T ss_pred HHHHh
Confidence 88754
No 266
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.78 E-value=8.3e-17 Score=173.46 Aligned_cols=198 Identities=16% Similarity=0.106 Sum_probs=133.0
Q ss_pred HHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCC--CCCCcE--EEeCChHHHHHHHHHHHhcccccc
Q 043646 91 RYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGG--GQADAI--IFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 91 ~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~--~~~~~v--ift~sGttaal~~l~~~l~~~~~~ 166 (625)
+.+.+++.+.+... ....|....+..++.+.+.+++.+..+. +++ +| ++| +|++++|..+++++.
T Consensus 47 ~~l~~a~~~~~~~~----~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-~i~v~iT-~Ga~~al~~~~~~l~----- 115 (396)
T PRK09257 47 RAVKKAEARLLETE----TTKNYLPIEGLAAYRQAVQELLFGADSPALAAG-RVATVQT-PGGTGALRVGADFLK----- 115 (396)
T ss_pred HHHHHHHHHhcccc----cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccC-eEEEEec-CCccHHHHHHHHHHH-----
Confidence 67777776654321 1111222223344444455544433332 343 55 787 899999999887652
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec-CC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL-DD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
.++|||+ |+++.+.|+.+...++..|++++.+|+ +. ++.+|+++|++++++. .++++++++++++|
T Consensus 116 --------~~~pGd~--Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--~~~~~~~i~~~p~N 183 (396)
T PRK09257 116 --------RAFPDAK--VWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQA--PAGDVVLLHGCCHN 183 (396)
T ss_pred --------HhCCCCe--EEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhC--CCCCEEEEeCCCCC
Confidence 1378986 999999999999889999999999997 33 4679999999988731 13467888899999
Q ss_pred ccccccC---HHHHHHHHHHcCCEEEEeccCcCCCcc-----ccCCCCC-CCCCcEEEEcCCCCCCCCC-CceEEEE
Q 043646 245 VTGIYSD---TRSIARLLHQYGGFACFDFAASGPYVK-----INLRSRN-IDGYDAIFLATHKFLGGPG-TPGILLI 311 (625)
Q Consensus 245 ~TG~~~~---l~~I~~la~~~g~~vivD~A~~~g~~~-----id~~~~~-~~~~D~v~~S~hK~lggp~-g~G~l~v 311 (625)
|||.+.+ +++|+++|++||+++++|+++..-... ..+..+. ...--+++.|++|.|+.|+ .+|++++
T Consensus 184 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 184 PTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 9999977 567888999999999999996531110 0111110 0112366789999998433 4899874
No 267
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.78 E-value=1.8e-16 Score=169.77 Aligned_cols=321 Identities=14% Similarity=0.097 Sum_probs=183.8
Q ss_pred CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhccccc
Q 043646 86 SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVP 165 (625)
Q Consensus 86 ~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~ 165 (625)
.+..++.+.+++.+.+.... .... ....+...++++++++++|.+ +++++.+| ++++..++.++.....
T Consensus 41 lG~~~p~v~~a~~~~~~~~~-~~~~------~~~~~~~~~l~~~la~~~g~~---~~~~~~sg-~~a~~~a~~~~~~~~~ 109 (379)
T TIGR00707 41 LGHAHPKLVEALKEQLEKLV-HVSN------LYYTEPQEELAEKLVEHSGAD---RVFFCNSG-AEANEAALKLARKYTG 109 (379)
T ss_pred CCCCCHHHHHHHHHHHhhcc-cccc------ccCCHHHHHHHHHHHhhCCCC---EEEEeCCc-HHHHHHHHHHHHHHhh
Confidence 44566899999988885431 1111 012356778999999999874 67777444 4445544444310000
Q ss_pred chhhhhhhhccC-CCCceEEEEcCCCCchhHHHHHHcCCeEE----EEecCCCC----CCCHHHHHHHHHHhhhCCCCeE
Q 043646 166 SIMRDKLITSLR-DEERWVVFLGPYEHHSNLLSWRQSLAEVV----EIGLDDNG----LLDIEALRSQLELYKAAKRPML 236 (625)
Q Consensus 166 ~~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv----~v~~~~~~----~ld~~~L~~~l~~~~~~~~~~l 236 (625)
..+ ++++ |++....|+.........+.... ..++..+. ..|+++|++.++ +++++
T Consensus 110 ---------~~~~~~~~--vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~ 173 (379)
T TIGR00707 110 ---------DKGKEKKK--IIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-----DETAA 173 (379)
T ss_pred ---------ccCCCCCe--EEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-----hCeeE
Confidence 001 2454 55555444433323322232221 12222211 128999999987 47899
Q ss_pred EEEecccCcccccc----CHHHHHHHHHHcCCEEEEeccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEE
Q 043646 237 GSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGIL 309 (625)
Q Consensus 237 v~~~~~~n~TG~~~----~l~~I~~la~~~g~~vivD~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l 309 (625)
|++++++|++|... ++++|.++|+++|+++++|++++ ++... ....... ...|+++ ++|.+++...+|++
T Consensus 174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~-~~~d~~t--~sK~~~~G~riG~~ 250 (379)
T TIGR00707 174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYG-IEPDIIT--LAKGLGGGVPIGAT 250 (379)
T ss_pred EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcC-CCCCEEE--EcccccCCcccEEE
Confidence 99988888888653 37899999999999999999976 33211 1111111 1356654 56999844468999
Q ss_pred EEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q 043646 310 LISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYI 388 (625)
Q Consensus 310 ~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~ 388 (625)
++++++ ++.+.+...+ ...+. +.....+.++++.+ + ...+.++.++++
T Consensus 251 ~~~~~~--~~~~~~~~~~------------------------~~~~~~~~~~~aa~aaL~~~--~---~~~~~~~~~~~~ 299 (379)
T TIGR00707 251 LAKEEV--AEAFTPGDHG------------------------STFGGNPLACAAALAVLEVI--E---KERLLENVKEKG 299 (379)
T ss_pred EEcHHH--HhhhcCCCCC------------------------CCCCCCHHHHHHHHHHHHHH--H---hhhHHHHHHHHH
Confidence 998877 3333221100 01122 22222233444443 2 123556667777
Q ss_pred HHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 389 ESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 389 ~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
++++++|.++ +...........+.++.+. .+. +..++.+.|.+ .||.++++.
T Consensus 300 ~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~-~~~----------------~~~~~~~~l~~-~Gv~v~~~~--------- 351 (379)
T TIGR00707 300 DYFKERLEEL-GKNYPNKEVRGKGLMLGIE-LEA----------------PCKDIVKKALE-KGLLVNCAG--------- 351 (379)
T ss_pred HHHHHHHHHH-HhhCCCCccccCceEEEEE-ecC----------------cHHHHHHHHHH-CCcEEeeCC---------
Confidence 7777777653 1111101001122333333 221 14578888855 799998531
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.+++||++++.++++++++++++|+++
T Consensus 352 ------------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 352 ------------------------PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred ------------------------CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 378999999889999999999999875
No 268
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.76 E-value=3.2e-16 Score=156.99 Aligned_cols=325 Identities=18% Similarity=0.178 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH--
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-- 197 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-- 197 (625)
......++++|+.+-|.-.. +.+.||..+....+... .++||. |+.++.=|......
T Consensus 61 NPT~~vlE~RiAaLEGG~aa---~a~aSG~AA~~~ai~~l----------------a~aGD~--iVss~~LYGGT~~lf~ 119 (426)
T COG2873 61 NPTTDVLEERIAALEGGVAA---LAVASGQAAITYAILNL----------------AGAGDN--IVSSSKLYGGTYNLFS 119 (426)
T ss_pred CchHHHHHHHHHHhhcchhh---hhhccchHHHHHHHHHh----------------ccCCCe--eEeeccccCchHHHHH
Confidence 33455688999999887544 34446666644444333 478996 88777666554433
Q ss_pred --HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 198 --WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 198 --~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
++..|++|++|..+ |++.++++|+ ++||+|.+....||-+.+.|++.|+++||++|++++||.+-+.+
T Consensus 120 ~tl~~~Gi~v~fvd~~-----d~~~~~~aI~-----~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atp 189 (426)
T COG2873 120 HTLKRLGIEVRFVDPD-----DPENFEAAID-----ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATP 189 (426)
T ss_pred HHHHhcCcEEEEeCCC-----CHHHHHHHhC-----cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcc
Confidence 46689999999865 7999999999 69999999999999999999999999999999999999998887
Q ss_pred CccccCCCCCCCCCcEEEEcCCCCCCCCCC-ceEEEEeccccccCC--CCCcccCCceEEeeccccccccccccchhhhh
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKFLGGPGT-PGILLISKALYQLGS--SPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~lggp~g-~G~l~v~~~~~~l~~--~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
+..-.++- |+|+|+.|..||+||-+. +|-+++.....+... ..|.+.. .+..|. .+..-.
T Consensus 190 yl~rP~~h----GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~------------p~p~Yh-Gl~~~~ 252 (426)
T COG2873 190 YLCRPIEH----GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTT------------PDPSYH-GLVYTE 252 (426)
T ss_pred eecchhhc----CCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCC------------CCcccc-ceehhh
Confidence 65444432 899999999999997653 677777655422111 0111100 000000 000001
Q ss_pred cCCChhHHHHHHH-----------HHHHHHHhhcCHH---HHHHHHHHHHHHHHHhhCCCCcEEEeCCC-----------
Q 043646 353 NGGTPQIVQMIRA-----------ALAFWVKEYIGYE---VIKKQEDVYIESALGRILPNQNIQVLGNT----------- 407 (625)
Q Consensus 353 ~~gt~~~~~~~~a-----------al~~~~~~~~g~~---~i~~~~~~l~~~l~~~L~~l~gv~v~~~~----------- 407 (625)
..|.+.+...++. ....|+ -..|.| -+.+|..+++..+.+.|.+.|.+..+.-.
T Consensus 253 ~~g~~af~~~~r~~~lRDlGa~lsPfnAfl-~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la 331 (426)
T COG2873 253 TFGNAAFIIKARVQLLRDLGATLSPFNAFL-LLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALA 331 (426)
T ss_pred hcccHHHHHHHHHHHHHhcccccCcHHHHH-HHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHH
Confidence 1222222211110 011111 112444 23455566788899999998877654311
Q ss_pred ----CCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCC---chhhHhhhcCChhhHHHH
Q 043646 408 ----SVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACA---GPYGHTLLAFDQTRSLEI 480 (625)
Q Consensus 408 ----~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~---~~~~~~~l~~~~~~~~~~ 480 (625)
+...+++++|-+..+.+ ....+++.| +.+--.+.-|..-+ .|....+..++++.-.+
T Consensus 332 ~kyl~~g~g~vltF~~kgg~e--------------a~~~fi~~l-~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~- 395 (426)
T COG2873 332 KKYLPKGAGAVLTFGVKGGYE--------------AGKKFIDAL-KLFSHLANIGDARSLVIHPASTTHRQLSEEEQAA- 395 (426)
T ss_pred HhhccCCCceEEEEEecChHH--------------HHHHHHHHH-HHHHhhccccccceeEecCcccchhcCCHHHHHh-
Confidence 12356789998865421 112333333 22222222222111 13333344555433332
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 481 RSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 481 ~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.|+.++.||+|+|. ||++.+++-|++.++
T Consensus 396 --------aGv~~~~IRlSVGI----Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 396 --------AGVTPDLIRLSVGI----EDIDDIIADLEQALE 424 (426)
T ss_pred --------cCCCCCcEEEEecc----CCHHHHHHHHHHHHh
Confidence 67889999999985 777777777776554
No 269
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.76 E-value=9.6e-17 Score=169.14 Aligned_cols=238 Identities=21% Similarity=0.193 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
....++++.+|+.+|++. ..|.-+|||.++..++.++ +++||+ |+++...|-|+..++..
T Consensus 66 G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~---------------~~~gd~--VLv~RN~HkSv~~alil 125 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL---------------CRPGDK--VLVDRNCHKSVYNALIL 125 (417)
T ss_dssp THHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH---------------TTTTCE--EEEETT--HHHHHHHHH
T ss_pred cHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh---------------cCCCCE--EEEcCCcHHHHHHHHHH
Confidence 467889999999999974 3454589999999988887 589996 99999999999999999
Q ss_pred cCCeEEEEecCCC-----CCCCH-----HHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 201 SLAEVVEIGLDDN-----GLLDI-----EALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 201 ~G~~vv~v~~~~~-----~~ld~-----~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
.|+.+++++...+ +.+++ +.++++|+++.....+++|++++| |..|.+.|+++|+++||++|+.|+||+
T Consensus 126 ~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDE 204 (417)
T PF01276_consen 126 SGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLLVDE 204 (417)
T ss_dssp HTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-
T ss_pred cCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEEEEc
Confidence 9999999876431 24566 999999986411112456888876 577999999999999999999999999
Q ss_pred cCcCCC--ccccCCCCCCCCCc-------EEEEcCCCCCCCCCCceEEEEeccc-cccCCCCCcccCCceEEeecccccc
Q 043646 271 AASGPY--VKINLRSRNIDGYD-------AIFLATHKFLGGPGTPGILLISKAL-YQLGSSPPSTCGGGTVNYVNAFDEK 340 (625)
Q Consensus 271 A~~~g~--~~id~~~~~~~~~D-------~v~~S~hK~lggp~g~G~l~v~~~~-~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (625)
||+.-. .++...... -++| +++-|.||.+++....++|.++... +..+.
T Consensus 205 AhGah~~F~~lp~~a~~-~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~-------------------- 263 (417)
T PF01276_consen 205 AHGAHFGFHPLPRSALA-LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHER-------------------- 263 (417)
T ss_dssp TT-TTGGCSGGGTTCSS-TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHH--------------------
T ss_pred cccccccCCCCccchhh-ccCccccccceeeeechhhcccccccceEEEecCCCcccHHH--------------------
Confidence 987522 122211211 2788 9999999999988888999998875 21000
Q ss_pred ccccccchhhhhcCCChhHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHHHHhh---CCCCcEEEeCCC
Q 043646 341 DTLYLEDIEERENGGTPQIVQMIRAALAFWVK---EYIGYEVIKKQEDVYIESALGRI---LPNQNIQVLGNT 407 (625)
Q Consensus 341 ~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~---~~~g~~~i~~~~~~l~~~l~~~L---~~l~gv~v~~~~ 407 (625)
....-..+...+|+++-++ +++.... ...|. .+.++...++..++++| .++++++++++.
T Consensus 264 ----~~~~l~~~~TTSPSY~lmA--SlD~a~~~m~~~~G~-~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 264 ----VNEALSMHQTTSPSYPLMA--SLDVARAQMEEEEGR-ELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp ----HHHHHHHHS-SS--HHHHH--HHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred ----HHHHHHHHcCCChHHHHHH--HHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 0000122333445544432 2333221 12233 44555666678888888 788889988875
No 270
>PRK08637 hypothetical protein; Provisional
Probab=99.75 E-value=6.8e-16 Score=165.86 Aligned_cols=154 Identities=19% Similarity=0.176 Sum_probs=109.2
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH-HcCCeEEEEecC-CCCCCCH
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR-QSLAEVVEIGLD-DNGLLDI 218 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-~~G~~vv~v~~~-~~~~ld~ 218 (625)
+|++| +|+++++..++.++ .++||+ |++..+.|+.+...+. ..|++++.+|+. +++.+|+
T Consensus 71 ~I~it-~G~~~al~~~~~~l---------------~~~gd~--Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~ 132 (388)
T PRK08637 71 LPIVT-NALTHGLSLVADLF---------------VDQGDT--VLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDT 132 (388)
T ss_pred eeeEc-cchHHHHHHHHHHh---------------cCCCCE--EEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCH
Confidence 67887 89999999998887 578886 9999999988876654 579999999984 4556899
Q ss_pred HHHHHHHHHhhhCCCCeEEEEecccCccccccCH---HHHHHHHHH-----cCCEEEEeccCcCCC----ccccC-CCC-
Q 043646 219 EALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT---RSIARLLHQ-----YGGFACFDFAASGPY----VKINL-RSR- 284 (625)
Q Consensus 219 ~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l---~~I~~la~~-----~g~~vivD~A~~~g~----~~id~-~~~- 284 (625)
++++++++.. ..+..+++++++|+||||.+.+. ++|+++|++ |++++++|+++.--. ....+ ...
T Consensus 133 ~~l~~~~~~~-~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~ 211 (388)
T PRK08637 133 DALKEALQAA-YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALA 211 (388)
T ss_pred HHHHHHHHhh-ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhh
Confidence 9999988621 11345688899999999999774 566676664 899999999964211 11111 110
Q ss_pred CC-CCCcEE-EEcCCCCCCCCCC-ceEEEEec
Q 043646 285 NI-DGYDAI-FLATHKFLGGPGT-PGILLISK 313 (625)
Q Consensus 285 ~~-~~~D~v-~~S~hK~lggp~g-~G~l~v~~ 313 (625)
.. +.+-++ +.|++|.++.|+- +|++++..
T Consensus 212 ~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~ 243 (388)
T PRK08637 212 NLHSNILAVKLDGATKEEFVWGFRVGFITFGT 243 (388)
T ss_pred cccccceEEEeccccccCCCcccceEEEEEcc
Confidence 00 122122 3389998876753 89998753
No 271
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=2.9e-15 Score=160.40 Aligned_cols=327 Identities=14% Similarity=0.159 Sum_probs=189.2
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ -|+|..+. |..++.|.+++.+.+...... .. ....+...++.+++++..+. +
T Consensus 20 G~~~~d~~G~---~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~------~~~~~~~~~la~~l~~~~~~--~ 87 (377)
T PRK02936 20 GTKVTDNNGK---TYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV-SN------LFTNSLQEEVASLLAENSAG--D 87 (377)
T ss_pred cCEEEeCCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhcccc-cc------ccCCHHHHHHHHHHHhcCCC--C
Confidence 3445555453 37775333 567789999999988643211 11 01134455566666665543 2
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCe------------EEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAE------------VVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~------------vv~ 207 (625)
.++|+++|+.++...+..++. -+|++.+|......|.+....+...+.. +..
T Consensus 88 -~~~~~~sG~~a~~~A~~~a~~---------------~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (377)
T PRK02936 88 -LVFFCNSGAEANEAALKLARK---------------HTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTH 151 (377)
T ss_pred -EEEEeCCcHHHHHHHHHHHHH---------------hcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceE
Confidence 688887888875555543331 1343334555567777666555544321 122
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCc--ccc
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYV--KIN 280 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~--~id 280 (625)
++. -|+++|++.+. +++++|+++.+.+++|...+ +++|.++|++||+++|+|+++. ++.. .+.
T Consensus 152 ~~~-----~d~~~l~~~~~-----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~ 221 (377)
T PRK02936 152 VPF-----NDIKALKEVMN-----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFA 221 (377)
T ss_pred eCC-----CCHHHHHHhcc-----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhH
Confidence 222 27899999886 57899999999999887743 8999999999999999999975 2221 111
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
....+. ..|+++ +.|.+++...+|+++.++++. +.+.+.. .....+.+++.
T Consensus 222 ~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~~~~~--~~~~~~~------------------------~~~t~~~~~~~ 272 (377)
T PRK02936 222 YEQFGL-DPDIVT--VAKGLGNGIPVGAMIGKKELG--TAFGPGS------------------------HGSTFGGNPLA 272 (377)
T ss_pred HHhhCC-CCcEEE--EcccccCCCccEEEEEcHHHH--hhccCCC------------------------CCCCCCCCHHH
Confidence 111111 357654 569997322378888887762 2221110 00111223332
Q ss_pred -HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 361 -QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 361 -~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
..+.++++... . +...++.+++.+++++.|.+ ++.+..+.+ .+.++.+.+..
T Consensus 273 ~aaa~a~l~~~~-~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~----~g~~~~i~~~~-------------- 329 (377)
T PRK02936 273 MAAAKEVLQVIK-Q----PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG----KGLMIGIECTE-------------- 329 (377)
T ss_pred HHHHHHHHHHHH-h----ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee----cceEEEEEecc--------------
Confidence 22334444431 1 12334444445555555543 343332222 22333333321
Q ss_pred CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHH
Q 043646 436 KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAA 515 (625)
Q Consensus 436 ~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~a 515 (625)
....+.+.|. +.||.+.++ ..+++||+++..++++++++++++
T Consensus 330 ---~~~~~~~~l~-~~gv~v~~~---------------------------------g~~~lRi~p~~~~~~~~i~~~i~~ 372 (377)
T PRK02936 330 ---EVAPVIEQLR-EEGLLVLSA---------------------------------GPNVIRLLPPLVVTKEELDQAVYL 372 (377)
T ss_pred ---hHHHHHHHHH-HCCeEEecC---------------------------------CCCEEEEECCcccCHHHHHHHHHH
Confidence 1346777774 479988642 137899999989999999999999
Q ss_pred HHHH
Q 043646 516 LEFI 519 (625)
Q Consensus 516 L~~~ 519 (625)
|+++
T Consensus 373 l~~~ 376 (377)
T PRK02936 373 LKKV 376 (377)
T ss_pred HHHh
Confidence 9865
No 272
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.75 E-value=7e-16 Score=163.42 Aligned_cols=312 Identities=18% Similarity=0.181 Sum_probs=185.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCc
Q 043646 113 SYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH 192 (625)
Q Consensus 113 ~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~ 192 (625)
+.+++........+++.|+++.|+. .++.++||..| +..++.++ +++||. |+++..-|.
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g~---~a~~~~SGmaA-i~~~l~~l---------------l~~Gd~--iv~~~~~Y~ 105 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGGE---DALLFSSGMAA-ISAALLAL---------------LKPGDH--IVASDDLYG 105 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-S---EEEEESSHHHH-HHHHHHHH---------------S-TTBE--EEEESSSSH
T ss_pred cceeccccccHHHHHHHHHHhhccc---ceeeccchHHH-HHHHHHhh---------------cccCCc--eEecCCccC
Confidence 3345555666778999999999984 34444466555 65555555 578885 777777777
Q ss_pred hhHHHHH----HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC-CEEE
Q 043646 193 SNLLSWR----QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG-GFAC 267 (625)
Q Consensus 193 s~~~~~~----~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g-~~vi 267 (625)
.....++ ..|+++.+++.. |+++|+++++ +++++|.+..|+||+..+.|+++|+++||++| ++++
T Consensus 106 ~t~~~~~~~l~~~gv~v~~~d~~-----d~~~l~~~l~-----~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~v 175 (386)
T PF01053_consen 106 GTYRLLEELLPRFGVEVTFVDPT-----DLEALEAALR-----PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVV 175 (386)
T ss_dssp HHHHHHHHCHHHTTSEEEEESTT-----SHHHHHHHHC-----TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEE
T ss_pred cchhhhhhhhcccCcEEEEeCch-----hHHHHHhhcc-----ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEE
Confidence 7655544 369999988754 8999999998 68999999999999999999999999999999 9999
Q ss_pred EeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEec--cccccCCCCCcccCCceEEeeccccccccc
Q 043646 268 FDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISK--ALYQLGSSPPSTCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 268 vD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~--~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (625)
||.+.+.++..-.+. + |+|+++.|..|+++|-.. .|++++++ ++.. .+.
T Consensus 176 VDnT~atp~~~~pL~-~---GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~--~l~--------------------- 228 (386)
T PF01053_consen 176 VDNTFATPYNQNPLE-L---GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYD--RLR--------------------- 228 (386)
T ss_dssp EECTTTHTTTC-GGG-G---T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHH--HHH---------------------
T ss_pred eeccccceeeeccCc-C---CceEEEeeccccccCCcceeeEEEEECchhhhhh--hhc---------------------
Confidence 999977664322222 2 899999999999987653 47777665 2210 000
Q ss_pred cccchhhhhcCCC-hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------
Q 043646 344 YLEDIEERENGGT-PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS------------- 408 (625)
Q Consensus 344 ~~~~~~~~~~~gt-~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~------------- 408 (625)
..+...|. .+..... +++........+.++..+.+..+.+.|.+.|.++ |+.|.-
T Consensus 229 -----~~~~~~G~~~~p~da~-----ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~ 298 (386)
T PF01053_consen 229 -----EFRRLLGATLSPFDAW-----LLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQM 298 (386)
T ss_dssp -----HHHHHHT-B--HHHHH-----HHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHC
T ss_pred -----chhhhcCccchHHHHH-----HHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecc
Confidence 01111122 1111110 0111222344455566667899999999999885 654420
Q ss_pred CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHH
Q 043646 409 VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQ 485 (625)
Q Consensus 409 ~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 485 (625)
...+++++|.+..+. -....+.+.| +.+.+.+.-|...+. |....+..++.+...+
T Consensus 299 ~g~ggl~sf~l~~~~--------------~~~~~f~~~l-~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~------ 357 (386)
T PF01053_consen 299 SGGGGLLSFELKGGE--------------EAARRFLDAL-KLFSIAPSLGGVESLISHPASTSHRSLSPEERAE------ 357 (386)
T ss_dssp SSCTSEEEEEESSHH--------------HHHHHHHHH--SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHH------
T ss_pred cccCceeEEEeccch--------------hhhHhHHhhh-hhHhhhhhcCCcccccccccchhhccCChhhhhc------
Confidence 234578888886421 0123455555 334344443433221 2222122333222222
Q ss_pred hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 486 KGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 486 ~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.|+.++.||||+|. ||.+.|++-|++.+
T Consensus 358 ---~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL 385 (386)
T PF01053_consen 358 ---AGISDGLIRLSVGL----EDPDDLIADLEQAL 385 (386)
T ss_dssp ---TTS-TTEEEEE--S----S-HHHHHHHHHHHH
T ss_pred ---cCCCCCeeEEEecc----CCHHHHHHHHHHhc
Confidence 56778999999996 66777777766654
No 273
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.74 E-value=2.8e-15 Score=161.42 Aligned_cols=344 Identities=13% Similarity=0.101 Sum_probs=204.6
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..|+ -|+|..+ .|...+.|.+++.+++...+.. +.. ...+...++.++|+++++. +
T Consensus 26 G~~l~d~dG~---~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~-~~~------~~~~~~~~la~~L~~~~~~--~ 93 (397)
T TIGR03246 26 GSRVWDQQGK---EYIDFAGGIAVNALGHAHPELVKALIEQADKLWHI-GNG------YTNEPVLRLAKKLVDATFA--D 93 (397)
T ss_pred cCEEEeCCCC---EEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccc-cCc------cCCHHHHHHHHHHHhhCCC--C
Confidence 4555555453 4777644 5567889999999988643211 110 1134456788899998864 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~ 207 (625)
.+.|++||+.++...+-.++..... | -.++...+|......|.+...++...+. .+..
T Consensus 94 -~~~f~~SGseA~e~Alk~ar~~~~~---~------~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
T TIGR03246 94 -KVFFCNSGAEANEAALKLARRYALD---K------HGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKH 163 (397)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHHHh---c------CCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEE
Confidence 6888888999855555443311000 0 0123333555666777776655554332 2223
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccccc----CHHHHHHHHHHcCCEEEEeccCc-CCCccc--c
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAAS-GPYVKI--N 280 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~----~l~~I~~la~~~g~~vivD~A~~-~g~~~i--d 280 (625)
++. .|++++++++. +++++|+++.++++.|.+. .+++|.++|++||+++|+|+++. +|.... .
T Consensus 164 ~~~-----~d~~~l~~~l~-----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a 233 (397)
T TIGR03246 164 APY-----NDLAAAKALIS-----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYA 233 (397)
T ss_pred eCC-----CCHHHHHHHhc-----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchh
Confidence 332 38899999886 5789999998888888664 38999999999999999999973 221111 1
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
....+. .+|++++ .|.+++...+|++++++++. +.+..... +.+ + .+.|...
T Consensus 234 ~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~i~--~~~~~~~~-~~t---------------------~-~~~p~~~ 285 (397)
T TIGR03246 234 YMHYGV-TPDILTS--AKALGGGFPIGAMLTTTEIA--AHLKVGTH-GTT---------------------Y-GGNPLAC 285 (397)
T ss_pred hhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHHHH--HhccCCCc-CCC---------------------C-CCCHHHH
Confidence 111111 4687755 59996434478999988873 22221110 000 1 1334333
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc-EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN-IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 361 ~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g-v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
..+.++++.+ + .+.+.++.+.+.+++.+.|+++.. ..++... ...+.++.+.+.+.. .-.
T Consensus 286 aaa~a~l~~~--~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~~~~~~-------------~~~ 346 (397)
T TIGR03246 286 AVAGKVLDLV--N---TPELLAGVKQRHDLFVDGLEKINARYNVFSEI-RGKGLLIGAVLTEAY-------------QGK 346 (397)
T ss_pred HHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEee-ecCceEEEEEEcCch-------------hhH
Confidence 3334445543 2 235667777788888888866521 1111111 112333333332210 002
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
...+++.|.+ +||.+.+. .++++|+++++.+|++|+++++++|+++
T Consensus 347 ~~~~~~~l~~-~Gv~~~~~---------------------------------g~~~lR~~p~~~~t~~~i~~~~~~l~~~ 392 (397)
T TIGR03246 347 AKQFVNAAAE-EGVIALIA---------------------------------GPNVVRFAPSLVISDDDIDEGLARFERA 392 (397)
T ss_pred HHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 4567777765 69987631 1378999999999999999999999988
Q ss_pred HHh
Q 043646 520 AAY 522 (625)
Q Consensus 520 ~~~ 522 (625)
+..
T Consensus 393 l~~ 395 (397)
T TIGR03246 393 IEQ 395 (397)
T ss_pred HHH
Confidence 754
No 274
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.74 E-value=3.8e-15 Score=160.55 Aligned_cols=338 Identities=15% Similarity=0.113 Sum_probs=189.0
Q ss_pred ccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+....|+ -|+|..+. ++..+.+.+++.+.+....... . ........++.++++++.+. +
T Consensus 31 ~~~~d~dg~---~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~------~~~~~~~~~la~~l~~~~~~--~- 97 (396)
T PRK02627 31 ARLWDDDGK---EYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS-N------LYYIEPQEELAEKLVELSGM--D- 97 (396)
T ss_pred CEEEeCCCC---EEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc-c------ccCCHHHHHHHHHHHhhcCC--C-
Confidence 334444443 47776543 4445789999988775421111 1 01245667788889888765 3
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhHHHHHHcCCeEEE---EecCCCC--
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNLLSWRQSLAEVVE---IGLDDNG-- 214 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~~~G~~vv~---v~~~~~~-- 214 (625)
+++|+. |.++++..++++.... .+ + ...+.+ .|++. ...|.....+....+..... .++..+.
T Consensus 98 ~v~~~~-gg~eA~~~al~~a~~~-~~----~---~~~~~~--~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (396)
T PRK02627 98 KVFFCN-SGAEANEAAIKLARKY-GH----K---KGIEKP--EIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIY 166 (396)
T ss_pred EEEECC-CcHHHHHHHHHHHHHH-hc----c---cCCCCC--eEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceE
Confidence 789985 4555555555533100 00 0 000112 35544 44554444334333322211 1111110
Q ss_pred --CCCHHHHHHHHHHhhhCCCCeEEEEecccCcccc-ccC---HHHHHHHHHHcCCEEEEeccCc-CCCcc--ccCCCCC
Q 043646 215 --LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGI-YSD---TRSIARLLHQYGGFACFDFAAS-GPYVK--INLRSRN 285 (625)
Q Consensus 215 --~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~-~~~---l~~I~~la~~~g~~vivD~A~~-~g~~~--id~~~~~ 285 (625)
..|+++|++++. +++++|+++.++|++|. ..+ +++|.++|++||+++|+|++++ ++... ......+
T Consensus 167 ~~~~d~~~l~~~i~-----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~ 241 (396)
T PRK02627 167 VPFNDIEALKAAIT-----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYG 241 (396)
T ss_pred eCCCCHHHHHHhcC-----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcC
Confidence 128999999886 57999999999999995 333 7899999999999999999976 33221 1111111
Q ss_pred CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH-HHHH
Q 043646 286 IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV-QMIR 364 (625)
Q Consensus 286 ~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~-~~~~ 364 (625)
. .+|+++ +.|.+++...+|++++++++. +.+.+.... ...+.+++. .++.
T Consensus 242 ~-~pdi~t--~sK~~~~G~rig~~~~~~~~~--~~~~~~~~~------------------------~t~~~~~~~~~aa~ 292 (396)
T PRK02627 242 I-EPDIMT--LAKGLGGGVPIGAVLAKEKVA--DVFTPGDHG------------------------STFGGNPLACAAAL 292 (396)
T ss_pred C-CCCEEE--EcchhhCCcccEEEEEcHHHH--hccCCCCCC------------------------CCCCCCHHHHHHHH
Confidence 1 357665 459998434589999988872 333211100 011222222 2223
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCCh
Q 043646 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHG 440 (625)
Q Consensus 365 aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~ 440 (625)
++++.. +. +.+.++.+++.+++.+.|.+ .+.+..... .+.++.+.. .. +.
T Consensus 293 ~~l~~~--~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~i~~-~~----------------~~ 346 (396)
T PRK02627 293 AVIEII--EE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG----LGLMIGIEL-DR----------------PA 346 (396)
T ss_pred HHHHHH--hh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc----CcEEEEEEe-cC----------------cH
Confidence 334433 11 23344555555555555443 332222111 223333322 21 24
Q ss_pred HHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 441 PFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 441 ~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
.++++.|.+ .||.+.++. .+++|+++++.+++++++++++.|++++
T Consensus 347 ~~~~~~l~~-~Gv~v~~~~---------------------------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 347 AEIVKKALE-KGLLINVTG---------------------------------DNVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred HHHHHHHHH-CCeEEeecC---------------------------------CCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 578888866 499997531 2679999998899999999999999887
Q ss_pred Hh
Q 043646 521 AY 522 (625)
Q Consensus 521 ~~ 522 (625)
++
T Consensus 393 ~~ 394 (396)
T PRK02627 393 KE 394 (396)
T ss_pred Hh
Confidence 54
No 275
>PLN02368 alanine transaminase
Probab=99.73 E-value=8.9e-16 Score=164.94 Aligned_cols=179 Identities=16% Similarity=0.103 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHhCC--CCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhcc-CCCCceEEEEcCCCCchh
Q 043646 118 RMTKMVHEASNYIKRCLGG--GQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSL-RDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 118 ~~~~~~~~~~~~ia~~~g~--~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l-~~gd~~~Vlv~~~~h~s~ 194 (625)
+..++.+.+.+++.+..|. +++ +|++| +|++.+|..++.++ + ++||+ |+++.+.|+.+
T Consensus 108 G~~~LR~aia~~~~~~~g~~~~~~-~I~it-~Ga~~al~~~~~~l---------------~~~pGd~--Vli~~P~Y~~y 168 (407)
T PLN02368 108 GLPGVRKEVAEFIERRDGYPSDPE-LIFLT-DGASKGVMQILNAV---------------IRGEKDG--VLVPVPQYPLY 168 (407)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChh-hEEEc-ccHHHHHHHHHHHH---------------cCCCCCE--EEEeCCCCccH
Confidence 3455666666666666574 344 89998 89999999888876 4 58886 99999999999
Q ss_pred HHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhh-CCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEE
Q 043646 195 LLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKA-AKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACF 268 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~-~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~viv 268 (625)
...++..|++++.++++. ++.+|+++|+++++.... ..+++++++++|+||||.+.+ +++|+++|++||+++|+
T Consensus 169 ~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 169 SATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG 248 (407)
T ss_pred HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 988999999999999875 357999999999973211 126899999999999999977 46678889999999999
Q ss_pred eccCcCCC-----ccccCC----CCC--C--CCCcEEEEcCCCCC-CCCC-CceEEEE---eccc
Q 043646 269 DFAASGPY-----VKINLR----SRN--I--DGYDAIFLATHKFL-GGPG-TPGILLI---SKAL 315 (625)
Q Consensus 269 D~A~~~g~-----~~id~~----~~~--~--~~~D~v~~S~hK~l-ggp~-g~G~l~v---~~~~ 315 (625)
|+++.--. ....+. .+. . ...-+++.|++|.| +.|+ .+|++++ ++++
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~l 313 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKT 313 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHH
Confidence 99965311 011111 010 0 01235567999998 4443 3899985 5555
No 276
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.73 E-value=2.4e-15 Score=144.02 Aligned_cols=202 Identities=15% Similarity=0.181 Sum_probs=160.3
Q ss_pred CCcchHHHHHHHHHhhCCCCCCCCCCcch-hh---HHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhc
Q 043646 86 SGRSLRYIEDYIINNVLPFYGNTHTSDSY-VG---QRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMG 161 (625)
Q Consensus 86 ~~~~p~~v~ea~~~~l~~~~~n~~~~~~~-~~---~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~ 161 (625)
.+..+++..+++.++-.-+ +.+++- .| .-....+..+.+.+++++|.+ .+-+| +|+-.+=..++.+++
T Consensus 26 GGiLt~eArkal~E~gDGY----SvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D---~~R~t-~GARe~KfavMhal~ 97 (382)
T COG1103 26 GGILTEEARKALLEWGDGY----SVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD---EVRVT-AGAREAKFAVMHALC 97 (382)
T ss_pred cCcCCHHHHHHHHHhcCCc----chhhhhccCccccccCCcHHHHHHHHHHHhCCc---eeeec-ccchhhHHHHHHHhc
Confidence 3566677777766543211 111111 01 112234556677799999996 56788 899998888888883
Q ss_pred ccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhh--CCCCeEE
Q 043646 162 ITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKA--AKRPMLG 237 (625)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~--~~~~~lv 237 (625)
.+|| .|++....|++...+....|.+|..||-.. +..++++...+.|.+-.. +..+.+.
T Consensus 98 ---------------~~gd--~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~la 160 (382)
T COG1103 98 ---------------KEGD--WVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALA 160 (382)
T ss_pred ---------------cCCC--EEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEE
Confidence 6777 488899999999888999999999999653 568999999888875332 2358899
Q ss_pred EEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 238 ~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
.++|+....|.+.|.+.++++|+++|+++++.+|+.+|-.+++.++. ++||++.|+||.+..-+.+|+|-++.+.
T Consensus 161 llTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~---g~DFiVgSGHKsmAAs~PiGvl~~~eE~ 235 (382)
T COG1103 161 LLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEI---GADFIVGSGHKSMAASAPIGVLAMSEEW 235 (382)
T ss_pred EEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccccccc---CCCEEEecCccchhccCCeeEEeehhHH
Confidence 99999999999999999999999999999999999999999999988 9999999999999877778999999887
No 277
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.73 E-value=8.3e-15 Score=158.14 Aligned_cols=334 Identities=13% Similarity=0.129 Sum_probs=204.6
Q ss_pred EeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 043646 79 TYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAA 152 (625)
Q Consensus 79 ~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaa 152 (625)
-|+|..+. |-..+.|.+++.+.+.... .... ....+...++.+++++++|. + .++|+++|+.++
T Consensus 38 ~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~-~~~~------~~~~~~~~~l~~~l~~~~~~--~-~~~~~~SGs~A~ 107 (401)
T TIGR01885 38 RYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLT-LSSR------AFYNDVFGEFAEYVTKLFGY--D-KVLPMNTGAEAV 107 (401)
T ss_pred EEEEcccCHhhccCCCCCHHHHHHHHHHHHhcc-cccc------ccCCHHHHHHHHHHHhhcCC--C-EEEEeCccHHHH
Confidence 36676442 3347899999988875421 1111 01245667788999999874 2 678888899886
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCc-hhHHHHHHcCC------------eEEEEecCCCCCCCHH
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH-SNLLSWRQSLA------------EVVEIGLDDNGLLDIE 219 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~-s~~~~~~~~G~------------~vv~v~~~~~~~ld~~ 219 (625)
...+-.++.... +. .++.+++. +|+.....|+ +....+...|- .+..++. .|++
T Consensus 108 e~ai~~a~~~~~----~~---~~~~~~~~-~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~ 174 (401)
T TIGR01885 108 ETAIKLARKWGY----KV---KGIPENQA-IIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-----NNLE 174 (401)
T ss_pred HHHHHHHHHHhh----hh---cCCCCCCC-EEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-----CCHH
Confidence 555544331100 00 00123333 5666665544 55555554321 2333332 2789
Q ss_pred HHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCcc----ccCCCCCCCCCc
Q 043646 220 ALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVK----INLRSRNIDGYD 290 (625)
Q Consensus 220 ~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~----id~~~~~~~~~D 290 (625)
+|++++++. .++..+|+++.+.+++|.+.| +++|.++|++||+++++|+++. +|... .+...+ .+|
T Consensus 175 ~le~~l~~~--~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~---~~d 249 (401)
T TIGR01885 175 ALEEALEDH--GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENV---KPD 249 (401)
T ss_pred HHHHHHHhc--CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCC---CCC
Confidence 999988732 246788999999999999987 9999999999999999999964 22111 111122 578
Q ss_pred EEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHH
Q 043646 291 AIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAF 369 (625)
Q Consensus 291 ~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~ 369 (625)
+++++ |.+++. ..+|+++.++++. +.+.+...+ . ...+.|.....+.++++.
T Consensus 250 i~~~g--K~l~~g~~~ig~v~~~~~i~--~~~~~~~~~-~----------------------t~~~~p~~~~aa~a~L~~ 302 (401)
T TIGR01885 250 IVLLG--KALSGGVYPVSAVLADDDVM--LTIKPGEHG-S----------------------TYGGNPLACAVAVAALEV 302 (401)
T ss_pred EEEee--ccccCCCCCcEEEEEcHHHH--hhccCCCCC-C----------------------CCCCCHHHHHHHHHHHHH
Confidence 88776 999754 2478888888773 333221100 0 012344444444555655
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhh
Q 043646 370 WVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFND 449 (625)
Q Consensus 370 ~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~ 449 (625)
+. . +.+.++...+.+++.+.|.+++ ..++... ...+.++.+.+..+. .+....++++.|.+
T Consensus 303 i~--~---~~l~~~~~~~~~~~~~~L~~l~-~~~~~~~-~g~g~~~~i~~~~~~------------~~~~~~~l~~~l~~ 363 (401)
T TIGR01885 303 LE--E---EKLAENAEKLGEIFRDQLKKLP-KPIITEV-RGRGLLNAIVIDESK------------TGRTAWDLCLKLKE 363 (401)
T ss_pred HH--h---ccHHHHHHHHHHHHHHHHHhcc-CCceeEE-eecCeeEEEEeccCc------------chhHHHHHHHHHHh
Confidence 52 1 2455677888999999998773 1222111 123455555443211 01235678888864
Q ss_pred hcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 450 LFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 450 ~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
+||.+.++ .++.+||++++.+|++|+++++++|++++
T Consensus 364 -~Gv~v~~~---------------------------------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 364 -KGLLAKPT---------------------------------HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred -CCEEEEec---------------------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 69998632 13789999999999999999999998765
No 278
>PLN02397 aspartate transaminase
Probab=99.73 E-value=7.8e-16 Score=166.96 Aligned_cols=257 Identities=14% Similarity=0.103 Sum_probs=161.8
Q ss_pred cCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec-CC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC--
Q 043646 176 LRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL-DD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD-- 251 (625)
Q Consensus 176 l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~-- 251 (625)
+.|||+ |+++.+.|+.+...++..|++++.+++ +. +..+|++.+++.+.+. .++++++++++++||||.+.+
T Consensus 139 ~~pGd~--Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~--~~~~~~i~~~~P~NPTG~v~s~e 214 (423)
T PLN02397 139 FYPGST--IYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA--PDGSFVLLHACAHNPTGVDPTPE 214 (423)
T ss_pred hCCCCE--EEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHH
Confidence 358885 999999999999889999999999997 33 4679999998888632 246889999999999999977
Q ss_pred -HHHHHHHHHHcCCEEEEeccCcCCCc-c-----ccCCCCCCCCC-cEEEEcCCCCCCCCC-CceEEE--E-eccccccC
Q 043646 252 -TRSIARLLHQYGGFACFDFAASGPYV-K-----INLRSRNIDGY-DAIFLATHKFLGGPG-TPGILL--I-SKALYQLG 319 (625)
Q Consensus 252 -l~~I~~la~~~g~~vivD~A~~~g~~-~-----id~~~~~~~~~-D~v~~S~hK~lggp~-g~G~l~--v-~~~~~~l~ 319 (625)
+++|+++|++||+++++|+++..-.. . ..+......+. -+++.|++|.++.|+ .+|+++ + +++.. .
T Consensus 215 ~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~--~ 292 (423)
T PLN02397 215 QWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVA--V 292 (423)
T ss_pred HHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHH--H
Confidence 56678889999999999999542211 0 01111100111 255679999998443 389986 3 23221 0
Q ss_pred CCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh----c---CHHHHHHHHHHHHHHHH
Q 043646 320 SSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY----I---GYEVIKKQEDVYIESAL 392 (625)
Q Consensus 320 ~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~----~---g~~~i~~~~~~l~~~l~ 392 (625)
.+. ............+++...+. ++..++ .+. . ..+.++++.++.++.+.
T Consensus 293 ~~~--------------------~~~~~~~~~~~~~~~~~~q~--~~~~~L-~~~~~~~~~~~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 293 RVK--------------------SQLKLIARPMYSNPPIHGAS--IVATIL-GDPELFSEWTKELKGMADRIISMRQKLY 349 (423)
T ss_pred HHH--------------------HHHHHHHhcccCCCcHHHHH--HHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000000001122222221 111111 110 0 13455667777888899
Q ss_pred HhhCCCC---cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhh
Q 043646 393 GRILPNQ---NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTL 469 (625)
Q Consensus 393 ~~L~~l~---gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~ 469 (625)
+.|+++. ++.+..| +++.+.|.-. + .++++.|.+++||.+.+
T Consensus 350 ~~L~~~~~~~~~~~~~p----~gg~fl~~~l------------------~-~~~~~~Ll~~~~V~v~~------------ 394 (423)
T PLN02397 350 DALEARGSPGDWSHITK----QIGMFSFTGL------------------N-KEQVDRMTKEYHIYMTR------------ 394 (423)
T ss_pred HHHHhcCCCCCCCcccC----CceEEEecCC------------------C-HHHHHHHHHhCCEEECC------------
Confidence 9998762 1444444 3444444322 1 35778888889999851
Q ss_pred hcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 470 LAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 470 l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+ ||++.. .+.+.+++++++|++++++
T Consensus 395 -----------------------~~--Ri~~~~-~~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 395 -----------------------DG--RISMAG-LSSKNVPYLADAIHAVVTN 421 (423)
T ss_pred -----------------------CC--eEEEee-CCHHHHHHHHHHHHHHHhc
Confidence 24 999842 6889999999999998753
No 279
>PLN02624 ornithine-delta-aminotransferase
Probab=99.73 E-value=7.8e-15 Score=160.88 Aligned_cols=346 Identities=15% Similarity=0.140 Sum_probs=199.2
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..| .-|+|..+ .|...+.|.+++.+++........ ....+...++.+.++++++. +
T Consensus 66 G~~l~d~dG---~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~-------~~~~~~~~~la~~L~~~~~~--~ 133 (474)
T PLN02624 66 GSRIWDPEG---KKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR-------AFYNDKFPEFAEYLTSMFGY--D 133 (474)
T ss_pred eCEEEECCC---CEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc-------ccCCHHHHHHHHHHHhhcCC--C
Confidence 344555444 34788643 345588999999998865321111 01134556688888888864 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcC-CCCchhHHHHHHcCC------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGP-YEHHSNLLSWRQSLA------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~-~~h~s~~~~~~~~G~------------~vv 206 (625)
.++|+.+|+.++...+-.++..... + .+. ++++..|+... ..|.....++...+- .+.
T Consensus 134 -~~~f~~SGseA~e~AlklAr~~~~~---~----~g~-~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 204 (474)
T PLN02624 134 -MVLPMNTGAEGVETAIKLARKWGYE---K----KGI-PKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHL 204 (474)
T ss_pred -eEEEeCChHHHHHHHHHHHHHHHHh---h----cCC-CCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCce
Confidence 6888888988744443222210000 0 001 11222344444 444443333332211 122
Q ss_pred EEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCc----
Q 043646 207 EIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYV---- 277 (625)
Q Consensus 207 ~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~---- 277 (625)
.++. -|++.|++.++. ..+++.+|+++.++|++|.+.| +++|.++|++||+++|+|++|. +|..
T Consensus 205 ~~~~-----~d~~~l~~~l~~--~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~ 277 (474)
T PLN02624 205 KVDF-----GDLDALEKIFEE--DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML 277 (474)
T ss_pred EeCC-----CCHHHHHHHHHh--CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh
Confidence 3332 278999998873 2346889999999999999988 9999999999999999999987 2221
Q ss_pred cccCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCC
Q 043646 278 KINLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT 356 (625)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt 356 (625)
..+.... .+|+++++ |.+|+. ..+|++++++++ +..+.+... +.+ ..+.
T Consensus 278 a~~~~~i---~pDiv~ls--K~lggG~~pigav~~~~~i--~~~~~~~~~-~~T----------------------~~g~ 327 (474)
T PLN02624 278 ACDWEEV---RPDVVILG--KALGGGVIPVSAVLADKDV--MLCIKPGEH-GST----------------------FGGN 327 (474)
T ss_pred hHHhcCC---CCCEEEec--ccccCCCCcceeeeecHHH--HhHhccCCc-CCC----------------------CCCC
Confidence 1121222 57888875 999765 357888888776 222222110 000 0233
Q ss_pred hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCc-EEEeCCCCCCCcceEEEEeccCCCCCCcccc
Q 043646 357 PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQN-IQVLGNTSVKRQAILSFLVYSTTNSSPENMK 431 (625)
Q Consensus 357 ~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~g-v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 431 (625)
|.....+.++++.+ +. +.+.++...+.+++++.|.+ ++. +..+.+ ++.++.+.+..+.
T Consensus 328 pl~~aaa~aaLe~l--~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg----~G~~~~i~l~~~~-------- 390 (474)
T PLN02624 328 PLASAVAMAALQVV--QD---EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRG----RGLLNAVVLNSPK-------- 390 (474)
T ss_pred HHHHHHHHHHHHHH--Hh---chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe----eEEEEEEEecCCC--------
Confidence 33333334555544 21 23444555555666655544 332 221111 3344444442210
Q ss_pred ccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHH
Q 043646 432 IERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEF 511 (625)
Q Consensus 432 ~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ 511 (625)
.......++++.|.+ .||.+.++ .++++||++++.+|++|+++
T Consensus 391 ---~~~~~a~~~~~~L~e-~GV~v~p~---------------------------------~~~~lR~~p~l~~t~e~id~ 433 (474)
T PLN02624 391 ---LGPVSAYDVCLKLKE-RGLLAKPT---------------------------------HDTIIRLAPPLSISEDELQE 433 (474)
T ss_pred ---cChHHHHHHHHHHHh-CCeEEecC---------------------------------CCCEEEEECCccCCHHHHHH
Confidence 000123567888755 79998643 13789999999999999999
Q ss_pred HHHHHHHHHHhh
Q 043646 512 ILAALEFIAAYG 523 (625)
Q Consensus 512 ll~aL~~~~~~~ 523 (625)
+++.|++++..-
T Consensus 434 ~l~~L~~~l~~~ 445 (474)
T PLN02624 434 CSKALSDVLEHD 445 (474)
T ss_pred HHHHHHHHHHHH
Confidence 999999887553
No 280
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=4.3e-16 Score=159.10 Aligned_cols=343 Identities=16% Similarity=0.128 Sum_probs=228.8
Q ss_pred EeccCC-CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH
Q 043646 79 TYADHT-ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ 157 (625)
Q Consensus 79 ~Yld~~-~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~ 157 (625)
-||..+ +.+++.+.+++++..+-... +.++. -.++.+...++++.+|+++|.+.. ++|. -|-..+-..+
T Consensus 145 NYLGFa~~~g~ca~~~~~~~~kygl~~-css~~-----e~G~~~~hkelE~l~A~f~g~e~a--~vF~-mGf~TNs~~~- 214 (519)
T KOG1357|consen 145 NYLGFAQSVGPCAEASLKSFDKYGLSR-CSSRH-----EAGTTEEHKELEELVARFLGVEDA--IVFS-MGFATNSMNI- 214 (519)
T ss_pred ccccccccCCcCChHHHHHHHHhcccc-cccch-----hcccHHHHHHHHHHHHHhcCCcce--EEEe-ccccccccCc-
Confidence 355543 44677788888886644321 22221 123567888999999999999754 6775 3422211111
Q ss_pred HHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhh--CCCC-
Q 043646 158 EVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKA--AKRP- 234 (625)
Q Consensus 158 ~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~--~~~~- 234 (625)
-. .+.|+. .|+....+|.|....++..|+.++....+ |+.+||+.|.+... .++|
T Consensus 215 p~---------------l~~~gs--LIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Th 272 (519)
T KOG1357|consen 215 PS---------------LLGKGS--LIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTH 272 (519)
T ss_pred ce---------------eecCCc--ceeeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcC
Confidence 11 145676 58889999999999999999999999876 78888888875321 1222
Q ss_pred -----eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCC---C---CCCCCCcEEEEcCCCCCCCC
Q 043646 235 -----MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLR---S---RNIDGYDAIFLATHKFLGGP 303 (625)
Q Consensus 235 -----~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~---~---~~~~~~D~v~~S~hK~lggp 303 (625)
.+|+.....++-|.+.++.++.++++++.+++++|+||+.|..+..-+ . .....+|++...+-|.||+.
T Consensus 273 rp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~ 352 (519)
T KOG1357|consen 273 RPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAA 352 (519)
T ss_pred CcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccc
Confidence 277778888899999999999999999999999999999887632111 1 12236789999999999855
Q ss_pred CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcC---HHHH
Q 043646 304 GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIG---YEVI 380 (625)
Q Consensus 304 ~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g---~~~i 380 (625)
+ |++..++.+.+ .++ ...+ ++.| ...-.|++++.+..++..+. ...| -++.
T Consensus 353 G--Gyiagsk~lid--~lr-t~s~--~~~y------------------at~~sppvaqq~~ssl~~i~-G~dgt~~g~~k 406 (519)
T KOG1357|consen 353 G--GYIAGSKELID--YLR-TPSP--SALY------------------ATSLSPPVAQQILTSVKHIM-GEDGTNRGRQK 406 (519)
T ss_pred c--ceecCcHHHHh--hhc-cCCC--ceee------------------cccCChHHHHHHHHHHHhhc-CCCcccHHHHH
Confidence 4 78888888843 221 1111 1001 01123566666555565553 2222 2355
Q ss_pred HHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCC
Q 043646 381 KKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCA 460 (625)
Q Consensus 381 ~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~ 460 (625)
.++...++.+++..|... ++.++++.+ .|++-..++.... -.++.+.|++ .+|.+..+.+
T Consensus 407 ~~~l~~ns~yfr~~l~~~-gfivyG~~d---SpVvplll~~~~k---------------~~~f~r~~l~-~nigvVvvgf 466 (519)
T KOG1357|consen 407 IERLAENSRYFRWELQKM-GFIVYGNND---SPVVPLLLYGPAK---------------IVAFSREMLE-RNIGVVVVGF 466 (519)
T ss_pred HHHHHhhhHHHHHhhhcC-cEEEecCCC---CCcceeeecCccc---------------ccHHHHHHHh-cCceEEEEeC
Confidence 667777888999999876 899998764 4555555544321 1256666655 5777776666
Q ss_pred CCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 461 CAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 461 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
++.|... +.+|+.....++.|+++++++.+..+-...+.
T Consensus 467 Patpl~e--------------------------~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~ 505 (519)
T KOG1357|consen 467 PATPLLE--------------------------SRARFCLSASHTKEDLDRALEVIDRVGDEDGV 505 (519)
T ss_pred CCchHHH--------------------------hHHHhhhcccccHHHHHHHHHHHhhhchhhcc
Confidence 5545322 56899999999999999999999987655443
No 281
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.72 E-value=9.6e-15 Score=166.88 Aligned_cols=372 Identities=13% Similarity=0.096 Sum_probs=230.4
Q ss_pred CCCCCCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCc-chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHH
Q 043646 43 HHPPHSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGR-SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTK 121 (625)
Q Consensus 43 ~~~~~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~-~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~ 121 (625)
..+|...+..+.++.+++.---.. ....|++.+...- .|+.|.+.+.+.- .+|..-+.-....+++..+
T Consensus 40 l~lp~~~sE~e~~~~~~~la~~N~---------~~~~fig~G~y~~~~p~~i~r~v~~~p-~~~TaytPyQ~EisQG~Le 109 (939)
T TIGR00461 40 LQLEAPSKEYEALAHLKKIASKNH---------KFKSYIGMGYYGTILPPVIQRNLLENP-GWYTAYTPYQPEISQGRLE 109 (939)
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCC---------CccccCCCCcCCCcCChHHHHHHHhCc-hhhhcCCCCChhhhhHHHH
Confidence 445666566677777766542210 0113444443332 3444544554311 1121111111224667778
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH--
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR-- 199 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~-- 199 (625)
..-+.+..++++.|.+.. +.-+. .++|++..+++.+.. ...+.+..|+++...|+.....++
T Consensus 110 ~l~e~Qt~i~eLtGm~~a-NaSl~-d~atA~aEa~~~a~~--------------~~~~~~~~vlv~~~~hP~~~~v~~t~ 173 (939)
T TIGR00461 110 ALLNFQTVVSDLTGLPVA-NASLL-DEGTAAAEAMALSFN--------------VSKKKANKFFVAKDLHPQTKSVLHTR 173 (939)
T ss_pred HHHHHHHHHHHHHCCChh-hhhcc-chhhHHHHHHHHHHH--------------hhcCCCCEEEECCCCCcchHHHHHHH
Confidence 888999999999999866 33444 466665665555432 112222359999999999987776
Q ss_pred --HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc
Q 043646 200 --QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV 277 (625)
Q Consensus 200 --~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~ 277 (625)
..|.+++.++ +++|++.+ ++..+++.. .|.+|.+.|+++|++++|++|++++++.-......
T Consensus 174 a~~~g~~v~~~~--------~~~l~~~~-------~~~~v~~q~-Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~l 237 (939)
T TIGR00461 174 AKPFGIEVIVVD--------CSDIKKAV-------DVFGCLLQY-PATDGSILDYKQLIDALHSHKSLVSVAADLMALTL 237 (939)
T ss_pred HHhcCcEEEEEc--------HHHHhhcC-------CEEEEEEEC-CCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCC
Confidence 3588888874 34454433 355555554 47889999999999999999999999654333333
Q ss_pred cccCCCCCCCCCcEEEEcCCCCC-----CCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhh
Q 043646 278 KINLRSRNIDGYDAIFLATHKFL-----GGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERE 352 (625)
Q Consensus 278 ~id~~~~~~~~~D~v~~S~hK~l-----ggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~ 352 (625)
..+..++ |+|+++.+.++|. |||. .|++.+++++ .+.++....|. +.+...........+.+....|.
T Consensus 238 l~~Pge~---GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~l--~r~lPgrivG~-s~D~~G~~~~~l~LqtReqhIrR 310 (939)
T TIGR00461 238 LTPPGHY---GADIVLGSSQRFGVPMGYGGPH-AAFFAVKDEY--NRKMPGRIVGV-SKDALGNTALRLALQTREQHIRR 310 (939)
T ss_pred cCCHHHc---CCcEEeeCCCccCCCCCCCCCc-eeeeeecHhh--HhhCCCCceeE-EecCCCCccceeecccccccccc
Confidence 3344444 8999977666654 4566 6999999988 45665555442 22211000001122233445677
Q ss_pred cCCChhHHHHH-----HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCC
Q 043646 353 NGGTPQIVQMI-----RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427 (625)
Q Consensus 353 ~~gt~~~~~~~-----~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~ 427 (625)
+.+|.|++..- .+++-.......|.++|.++++.++.++.+.|.+ .|+++..+. .-..+.+.. +.
T Consensus 311 ekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~---fF~~~~v~~-~~----- 380 (939)
T TIGR00461 311 DKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKT---WFDTLTVKV-GN----- 380 (939)
T ss_pred cccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCC---ccceEEEEe-CC-----
Confidence 88888876531 2221112235677889999999999999999988 588887541 111222222 10
Q ss_pred ccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 428 ~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
.+..++.+.|.+ .||.++.. ..+.++||+..++|++
T Consensus 381 ----------~~~~~i~~~~~~-~gi~l~~~---------------------------------~~~~i~~s~~E~~t~~ 416 (939)
T TIGR00461 381 ----------GISSELLKAAEE-FNINLRAV---------------------------------DTTTVGIALDETTTKA 416 (939)
T ss_pred ----------CCHHHHHHHHHH-CCCeeeec---------------------------------CCCEEEEEeecCCCHH
Confidence 125678888865 69998731 1367999999999999
Q ss_pred HHHHHHHHHH
Q 043646 508 EFEFILAALE 517 (625)
Q Consensus 508 did~ll~aL~ 517 (625)
||+.+++++.
T Consensus 417 di~~l~~~~~ 426 (939)
T TIGR00461 417 DVENLLKVFD 426 (939)
T ss_pred HHHHHHHHhc
Confidence 9999999985
No 282
>PRK15029 arginine decarboxylase; Provisional
Probab=99.71 E-value=2.1e-14 Score=161.99 Aligned_cols=174 Identities=18% Similarity=0.205 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
.....++++..|+.+|++.. ...+ ||||.++..++.+. +++||+ |+++...|-|+..++.
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t--~Flv-NGST~gn~a~i~a~---------------~~~gd~--Vlv~RN~HKSv~~al~ 263 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRS--WSVV-VGTSGSNRTIMQAC---------------MTDNDV--VVVDRNCHKSIEQGLI 263 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcE--EEEe-CChhHHHHHHHHHh---------------cCCCCE--EEeecccHHHHHHHHH
Confidence 34678899999999999743 4454 89999888887776 578986 9999999999999999
Q ss_pred HcCCeEEEEecCC--C---CCCC-----HHHHHHHHHHhh-----hCCCCeEEEEecccCccccccCHHHHHHHHHHcCC
Q 043646 200 QSLAEVVEIGLDD--N---GLLD-----IEALRSQLELYK-----AAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGG 264 (625)
Q Consensus 200 ~~G~~vv~v~~~~--~---~~ld-----~~~L~~~l~~~~-----~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~ 264 (625)
..|+.+++++... . +.++ ++.++++|+++. ..++++++++++| |..|++.++++|+++||++|+
T Consensus 264 L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~ 342 (755)
T PRK15029 264 LTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSD 342 (755)
T ss_pred HcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCC
Confidence 9999999996542 1 2455 899999997531 1134558888876 577999999999999999999
Q ss_pred EEEEeccCcCCC--cc-ccC-CCC-----CCCCCc-EEEEcCCCCCCCCCCceEEEEecc
Q 043646 265 FACFDFAASGPY--VK-INL-RSR-----NIDGYD-AIFLATHKFLGGPGTPGILLISKA 314 (625)
Q Consensus 265 ~vivD~A~~~g~--~~-id~-~~~-----~~~~~D-~v~~S~hK~lggp~g~G~l~v~~~ 314 (625)
+++||+||+.-. .+ +.- ..+ ...|+| +++-|.||.+++....++|.++..
T Consensus 343 ~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 343 RLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred eEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 999999987521 11 110 111 113788 888899999988777778877543
No 283
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=2e-14 Score=153.73 Aligned_cols=334 Identities=13% Similarity=0.133 Sum_probs=189.6
Q ss_pred CCccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC
Q 043646 65 NDVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ 138 (625)
Q Consensus 65 ~~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~ 138 (625)
.+..+.+..|+ -|+|..+. +. .+.|.+++.+.+.....++.. .....+..+++.+....
T Consensus 19 ~G~~l~d~dg~---~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~~~la~~l~~~~ 83 (375)
T PRK04260 19 EGNYLIDTDGK---KYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNL-----------YLNSLQEEVAQKLIGDK 83 (375)
T ss_pred eeCEEEeCCCC---EEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCc-----------cCCHHHHHHHHHHhcCc
Confidence 34555656553 37776443 55 567999999988654333221 12335556666554433
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEE---------EEe
Q 043646 139 ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVV---------EIG 209 (625)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv---------~v~ 209 (625)
+..++|+++|+.++...+..++. ...+++ +|.....+|.+...++...|.+.. .++
T Consensus 84 ~~~~~~~~SGseA~~~Al~~ar~--------------~~~~~~-vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (375)
T PRK04260 84 DYLAFFCNSGAEANEAAIKIARK--------------ATGKQE-IITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFS 148 (375)
T ss_pred CCEEEEcCccHHHHHHHHHHHHH--------------hcCCCe-EEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeE
Confidence 32467887787775555443331 122232 455556777776656544333211 011
Q ss_pred cCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCcc--ccCC
Q 043646 210 LDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVK--INLR 282 (625)
Q Consensus 210 ~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~~--id~~ 282 (625)
.. ...|++++++++. +++.+|+++.++|++|.+.+ +++|.++|+++|+++++|+++.. +... ....
T Consensus 149 ~~--~~~dl~~l~~~l~-----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~ 221 (375)
T PRK04260 149 YA--IFNDLNSVKALVN-----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFE 221 (375)
T ss_pred Ee--CCCCHHHHHHhcC-----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhH
Confidence 00 1248899998886 46889999999999999865 89999999999999999999752 2111 1100
Q ss_pred CCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHH
Q 043646 283 SRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM 362 (625)
Q Consensus 283 ~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 362 (625)
..+. .+|++ +++|.+++...+|++++++++ ...+..... .. ...+++....+
T Consensus 222 ~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~~--~~~~~~~~~-~~----------------------t~~~~~~~~~a 273 (375)
T PRK04260 222 HYGI-EPDIF--TLAKGLANGVPVGAMLAKSSL--GGAFGYGSH-GS----------------------TFGGNKLSMAA 273 (375)
T ss_pred hhCC-CCCEE--EecccccCCcceEEEEEcHHH--HhhcCCCCC-CC----------------------CCCcCHHHHHH
Confidence 1111 46765 567999743347999999887 222211100 00 00122332233
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHH
Q 043646 363 IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPF 442 (625)
Q Consensus 363 ~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (625)
+.+.++....+ .-.+++++..+.+++.+.+.+.+.+.+..+.. . +.+....+.. +...
T Consensus 274 a~a~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~-g~~~~~~~~~----------------~~~~ 331 (375)
T PRK04260 274 ASATLDIMLTA-GFLEQALENGNYLQEQLQKALQDKETVTTVRG----L-GYMIGIETTA----------------DLSQ 331 (375)
T ss_pred HHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec----c-ceEEEEEecC----------------cHHH
Confidence 33344333111 11234444444444445444444433322211 1 3333322221 2457
Q ss_pred HHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 443 VATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 443 v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
+.+.|.+ +||.+.+. ..+.+|++++..++++|++++++.|+++
T Consensus 332 ~~~~l~~-~Gi~v~~~---------------------------------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 332 LVEAARD-KGLIVLTA---------------------------------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHHh-CCCEEecC---------------------------------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 8888855 79998632 1367999999999999999999999875
No 284
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=3.1e-14 Score=146.61 Aligned_cols=334 Identities=18% Similarity=0.191 Sum_probs=213.3
Q ss_pred CCCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC
Q 043646 64 GNDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137 (625)
Q Consensus 64 ~~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~ 137 (625)
|.+..+++.-| .-|+|..+ .|..++.+.+++.++....+.-++. ...+...++.+.+.+..+ .
T Consensus 31 G~G~~v~D~~G---~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~-------~~~~~~~~la~~L~~~s~-~ 99 (404)
T COG4992 31 GEGAYVWDQQG---REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNL-------FYNEPQAELAEKLVELSP-F 99 (404)
T ss_pred ccccEEECCCC---CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccc-------cCChHHHHHHHHHHhhCc-c
Confidence 44566666655 34888543 4567899999999988655432222 123456677788888887 4
Q ss_pred CCCcEEEeCChHHH---HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH-HHHHc-------CC---
Q 043646 138 QADAIIFCGAGTTA---AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL-SWRQS-------LA--- 203 (625)
Q Consensus 138 ~~~~vift~sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~~-------G~--- 203 (625)
.+ .|+|++||+.| +|+.. +... -.++. ..||....++|.-.. ++... +.
T Consensus 100 ~d-~vff~NSGaEA~EaAiKlA-Rk~~--------------~~~~k-~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl 162 (404)
T COG4992 100 AD-RVFFCNSGAEANEAALKLA-RKYT--------------GDPEK-SKIIAFENSFHGRTLGALSATGQPKYRKGFGPL 162 (404)
T ss_pred cc-EEEEcCCcHHHHHHHHHHH-HHHc--------------CCCCC-cEEEEEcCCcCCccceeeeccCChhhccCCCCC
Confidence 44 89999888887 34332 2221 11222 246655555444322 21111 11
Q ss_pred --eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCC-
Q 043646 204 --EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPY- 276 (625)
Q Consensus 204 --~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~- 276 (625)
.++.+|.+ |+++++++|+ ++|.+|++..++-..|++.+ ++++.++|++||+++|+|++|..--
T Consensus 163 ~~g~~~vpfn-----Di~al~~ai~-----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GR 232 (404)
T COG4992 163 LPGFRHVPFN-----DIEALEAAID-----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGR 232 (404)
T ss_pred CCCceecCCC-----CHHHHHHHhc-----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCc
Confidence 34455554 8999999999 58999999999999999866 7889999999999999999987421
Q ss_pred -------ccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchh
Q 043646 277 -------VKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIE 349 (625)
Q Consensus 277 -------~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (625)
...++ .+|++++. |.+||...+|+++.++.. ...+.|-..| .|
T Consensus 233 TGk~fA~e~~gV------~PDI~tla--K~LgGG~PigA~la~~~~--~~~~~~G~Hg-ST------------------- 282 (404)
T COG4992 233 TGKLFAYEHYGV------EPDILTLA--KALGGGFPIGAMLATEEI--ASAFTPGDHG-ST------------------- 282 (404)
T ss_pred cchHHHHHHhCC------CCCEEEee--ccccCCccceeeEEchhh--hhcCCCCccc-CC-------------------
Confidence 11222 56988887 999877778999998554 2233332222 11
Q ss_pred hhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc-EEEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 350 ERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN-IQVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 350 ~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g-v~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
..|.|-.++...++++.+. .+.+.++.++..++++++|.++.. ..++... ..++-++...+.++
T Consensus 283 ---fGGNpLacAv~~a~l~~l~-----~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~v-RG~GLmiGiel~~~------ 347 (404)
T COG4992 283 ---FGGNPLACAVALAVLEVLL-----EEGLLENVREKGEYLLQRLRELKRRYPLVKEV-RGRGLMIGIELKEP------ 347 (404)
T ss_pred ---CCcCHHHHHHHHHHHHHHc-----chhHHHHHHHHHHHHHHHHHHHhhcCCceeee-ecceeEEEEEecCc------
Confidence 1344545555556666653 346667777778888888876411 1111111 11222333333221
Q ss_pred cccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 429 NMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 429 ~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
....++++.+.+ .|+.+-. + .+..+|+.+++-.+++|
T Consensus 348 ---------~~a~~~~~~~~~-~gvL~~~----a-----------------------------~~~ViR~~PpL~i~~ee 384 (404)
T COG4992 348 ---------YRARDIVRALRE-EGVLVLP----A-----------------------------GPNVIRFLPPLVITEEE 384 (404)
T ss_pred ---------ccHHHHHHHHHH-CCeEEec----C-----------------------------CCCeEEecCCccCCHHH
Confidence 124678888865 6988762 1 24789999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 043646 509 FEFILAALEFIAAYG 523 (625)
Q Consensus 509 id~ll~aL~~~~~~~ 523 (625)
++..+++|+.++...
T Consensus 385 i~~~~~~l~~~l~~~ 399 (404)
T COG4992 385 IDEALDALERALAAA 399 (404)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 285
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.70 E-value=1.1e-15 Score=160.49 Aligned_cols=345 Identities=18% Similarity=0.169 Sum_probs=187.5
Q ss_pred cchHHHHHHHHHhhCCCCC--CCCCCcchhhH-HHHHHHHHHHHHHHHHhCCCCCC---cEEEeCChHHHHHHHHHHHhc
Q 043646 88 RSLRYIEDYIINNVLPFYG--NTHTSDSYVGQ-RMTKMVHEASNYIKRCLGGGQAD---AIIFCGAGTTAAIKRLQEVMG 161 (625)
Q Consensus 88 ~~p~~v~ea~~~~l~~~~~--n~~~~~~~~~~-~~~~~~~~~~~~ia~~~g~~~~~---~vift~sGttaal~~l~~~l~ 161 (625)
...+.|.+++...+...|. .|+.. ++.|. ...++..-++++++++||+++++ +|=.- ||+.+++..+ .++
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~r-yy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~-SGs~An~av~-~aL- 106 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKR-YYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPH-SGSQANLAVY-MAL- 106 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEE-SSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---S-SHHHHHHHHH-HHH-
T ss_pred ccCHHHHHHhCCcceeeccccCCCcc-cccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecC-CchHHHHHHH-HHH-
Confidence 4556777777666654443 33332 23333 34556667889999999998553 23333 7888765554 444
Q ss_pred ccccchhhhhhhhccCCCCceEEEEcCCCC---chhHHH--H-----HHcCCeEEEEecC-CCCCCCHHHHHHHHHHhhh
Q 043646 162 ITVPSIMRDKLITSLRDEERWVVFLGPYEH---HSNLLS--W-----RQSLAEVVEIGLD-DNGLLDIEALRSQLELYKA 230 (625)
Q Consensus 162 ~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h---~s~~~~--~-----~~~G~~vv~v~~~-~~~~ld~~~L~~~l~~~~~ 230 (625)
++|||+ |+..+..| .+.-.. . .....+++.++++ +++.+|.+++++.+.+
T Consensus 107 --------------l~pGD~--Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~--- 167 (399)
T PF00464_consen 107 --------------LKPGDT--IMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKE--- 167 (399)
T ss_dssp --------------T-TT-E--EEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHH---
T ss_pred --------------HhhcCc--EEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhh---
Confidence 589997 66654443 322211 1 2234678889998 4789999999999986
Q ss_pred CCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEE
Q 043646 231 AKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILL 310 (625)
Q Consensus 231 ~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~ 310 (625)
.+|++|++...+. -...|++++.++|++.|+++++|.+|-.|.+.-.+-+-....+|++++|.||.|.||.| |+++
T Consensus 168 -~kPklIi~G~S~y--~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrg-giI~ 243 (399)
T PF00464_consen 168 -HKPKLIICGASSY--PRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRG-GIIL 243 (399)
T ss_dssp -H--SEEEEE-SST--SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS--EEEE
T ss_pred -cCCCEEEECchhc--cCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCc-eEEE
Confidence 4899998876543 34578999999999999999999999865443322221123689999999999999997 8888
Q ss_pred EeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC---CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q 043646 311 ISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG---GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVY 387 (625)
Q Consensus 311 v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~---gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l 387 (625)
.++........ + - ..+..+.+.+....-. |.|....+++.|+++........+...+++..+
T Consensus 244 ~~~~~~~~~~~-----~-~---------~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~N 308 (399)
T PF00464_consen 244 TNKGSKNVDKK-----G-K---------EIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKN 308 (399)
T ss_dssp ES-SEEEE-TT-----S-----------EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred EcCCccccCCc-----c-c---------ccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHH
Confidence 88544111100 0 0 0011122222222222 334444444444444311122245667778888
Q ss_pred HHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhH
Q 043646 388 IESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGH 467 (625)
Q Consensus 388 ~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~ 467 (625)
++.|.+.|.+. |++|++.- .....+...+.. .++++.++.+.| ++.||.+..-..+. ..
T Consensus 309 Ak~La~~L~~~-G~~v~~gg--Td~H~vlvd~~~--------------~~~~g~~a~~~L-e~~gI~vnkn~iP~---d~ 367 (399)
T PF00464_consen 309 AKALAEALQER-GFKVVTGG--TDNHQVLVDLRS--------------FGIDGKEAEKAL-EEAGIIVNKNTIPG---DR 367 (399)
T ss_dssp HHHHHHHHHHT-T-EEGGGS---SSSEEEEEGGG--------------GTS-HHHHHHHH-HHTTEE-EEE--TT---TS
T ss_pred HHHHHHHHhhC-CcEEEECC--CCCCeEEEEecc--------------cccchHHHHHHH-HhcCeeecccccCC---CC
Confidence 88999999876 99998632 122333333322 245677777777 66899986422211 11
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecC----CCCCHHHHHHHHHHH
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFP----YYMSNEEFEFILAAL 516 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~----~~~t~edid~ll~aL 516 (625)
....+..+||... .-..++|++.+.+.|
T Consensus 368 ---------------------~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 368 ---------------------SPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp ---------------------TTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred ---------------------CCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 0112467999975 334678888777654
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=3.8e-14 Score=152.04 Aligned_cols=342 Identities=14% Similarity=0.107 Sum_probs=200.3
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..+ .|...+.|.+++.+++.+.. ..... ...+...++.+++.+..+.
T Consensus 27 G~~~~d~dG---~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~-~~~~~------~~~~~~~~la~~l~~~~~~--- 93 (395)
T PRK03715 27 GSWLYDHNG---KRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPSPA------FYNEPMAKLAGLLTQHSCF--- 93 (395)
T ss_pred cCEEEECCC---CEEEECCcChhhccCCCCCHHHHHHHHHHHHhcc-ccccc------ccCHHHHHHHHHHhhccCC---
Confidence 344444445 34777643 45667899999998875432 11111 1123344555555554322
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEE---EEecCCC---
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVV---EIGLDDN--- 213 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv---~v~~~~~--- 213 (625)
+.++|+.||+.++...+-.++.... ..+++...+|......|.+...++...|.... ..|...+
T Consensus 94 ~~v~f~~SGseA~e~Aik~ar~~~~----------~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~ 163 (395)
T PRK03715 94 DKVFFANSGAEANEGAIKLARKWGR----------KHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPK 163 (395)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhh----------ccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCcee
Confidence 3789998888875444433321000 01233333566666788877766665553211 1111111
Q ss_pred -CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCccc--cCCCCC
Q 043646 214 -GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVKI--NLRSRN 285 (625)
Q Consensus 214 -~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~~i--d~~~~~ 285 (625)
...|++++++.+. +++.+|+++.+.+..|.+.| +++|.++|++||+++|+|+++.. |-... -....+
T Consensus 164 ~~~~d~~~l~~~l~-----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~g 238 (395)
T PRK03715 164 AELNDIASVEKLIT-----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSG 238 (395)
T ss_pred eCCchHHHHHHHcC-----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcC
Confidence 1247888998886 47899999999999999887 99999999999999999999872 11110 011111
Q ss_pred CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHH
Q 043646 286 IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRA 365 (625)
Q Consensus 286 ~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~a 365 (625)
. .+|+++++ |.+++...+|++++++++. ...+.. .++| + .|.|..++.+.+
T Consensus 239 v-~PDi~t~g--K~lg~G~p~~av~~~~~i~---~~~~~~-~~~T---------------------~-~g~pl~~aaala 289 (395)
T PRK03715 239 I-EPDIMTLG--KGIGGGVPLAALLAKAEVA---VFEAGD-QGGT---------------------Y-NGNPLMTAVGVA 289 (395)
T ss_pred C-CCceeeeh--hhhhCCcceEEEEEccccc---cccCCC-cCCC---------------------C-CCCHHHHHHHHH
Confidence 1 57987776 9997644468888888772 111110 0011 0 234444444455
Q ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC---CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHH
Q 043646 366 ALAFWVKEYIGYEVIKKQEDVYIESALGRILPN---QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPF 442 (625)
Q Consensus 366 al~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l---~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (625)
+++.+. .+.+.++.+++.+++.+.|+++ .++.-+ ...+.++.+.+..+. ...
T Consensus 290 ~L~~l~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v----rG~Glm~~i~l~~~~----------------~~~ 344 (395)
T PRK03715 290 VISQLL-----APGFLEGVRARGEYLKEKLLELSEERGLEGE----RGEGLLRALLLGKDI----------------GPQ 344 (395)
T ss_pred HHHHHH-----hccHHHHHHHHHHHHHHHHHHHhhcCCcCeE----EcceeEEEEEecCch----------------HHH
Confidence 566552 1345667777777777777643 122211 123455555553210 223
Q ss_pred HHHHhhh--hcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 443 VATLFND--LFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 443 v~~~L~~--~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
+.+.+.+ +.||.+... .+..+|+++++.+|++|++.++++|++++
T Consensus 345 ~~~~~~~~~~~Gi~~~~~---------------------------------~~~~lR~~p~l~~t~~ei~~~~~~l~~~l 391 (395)
T PRK03715 345 IVEKARDMQPDGLLLNAP---------------------------------RPNLLRFMPALNVTTEEIDQMIAMLRSVL 391 (395)
T ss_pred HHHHHHhccCCCEEEeec---------------------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 4444422 138887521 13679999999999999999999999987
Q ss_pred Hh
Q 043646 521 AY 522 (625)
Q Consensus 521 ~~ 522 (625)
.+
T Consensus 392 ~~ 393 (395)
T PRK03715 392 DK 393 (395)
T ss_pred Hh
Confidence 65
No 287
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=1.5e-14 Score=157.06 Aligned_cols=361 Identities=14% Similarity=0.099 Sum_probs=199.2
Q ss_pred CCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC
Q 043646 65 NDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ 138 (625)
Q Consensus 65 ~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~ 138 (625)
.+..+.+..|+ -|+|..+ .|...+.|.+++.+++..... .... ....+...++.+.|++.+....
T Consensus 32 ~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~-----~~~~~~~~~la~~l~~~~p~~~ 102 (423)
T PRK05964 32 EGAYLYLADGR---ELIDAISSWWVATHGHNHPYIDQAIREQLDRLDH-VIFA-----GFTHEPAERLAQRLVALTPGGL 102 (423)
T ss_pred cccEEEeCCCC---EEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCC-cccc-----ccCCHHHHHHHHHHHHhCCCCC
Confidence 34555555553 4888643 356778999999988854211 1100 0123345567788888875333
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHH-HHcCC------------eE
Q 043646 139 ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSW-RQSLA------------EV 205 (625)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~-~~~G~------------~v 205 (625)
+ .+.|+.+|+.+.-.++-.++.... . .-.++.+ .|+.-...|+.....+ ...+- .+
T Consensus 103 ~-~v~f~~sGseA~e~A~klar~~~~-----~----~~~~~r~-~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~ 171 (423)
T PRK05964 103 D-HVFFSDSGSVAVEVALKMALQYWR-----N----RGEPGRS-RFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQ 171 (423)
T ss_pred C-EEEEeCCcHHHHHHHHHHHHHHHH-----h----cCCCCCc-EEEEEcCCcCCccHHHHhcCCCccccccccCcCCCC
Confidence 3 799998888874433322221000 0 0012333 3555444444433332 21111 12
Q ss_pred EEEecCCC--CCCCHHHHHHHHHHhhhCCCCeEEEEec-ccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCc
Q 043646 206 VEIGLDDN--GLLDIEALRSQLELYKAAKRPMLGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYV 277 (625)
Q Consensus 206 v~v~~~~~--~~ld~~~L~~~l~~~~~~~~~~lv~~~~-~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~ 277 (625)
..++...+ ...+++++++.+.+ ..+++.+|++.. +++..|.+.+ +++|.++|++||+++|+|+++. +|..
T Consensus 172 ~~~~~~~~d~~~~~~~~l~~~l~~--~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~ 249 (423)
T PRK05964 172 VTAPFPPDGYEQATLDALEALLEK--HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRT 249 (423)
T ss_pred EEeCCCcchhHHHHHHHHHHHHHh--CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 33333221 11227888888863 224677888877 5777888765 8999999999999999999975 3221
Q ss_pred c--ccCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 278 K--INLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 278 ~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
. .-....+. .+|+++++ |+++++ ..+|+++.++++. +.+.+.. .++...+ ..-..
T Consensus 250 G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~~i~--~~~~~~~-~~~~~~~----------------~~T~~ 307 (423)
T PRK05964 250 GTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTAEIF--EAFYSDD-RAKAFMH----------------SPSYT 307 (423)
T ss_pred cchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcHHHH--HhhhcCC-ccccccc----------------CCCCC
Confidence 1 10011111 57887765 999766 3578888888873 2221100 0000000 00001
Q ss_pred CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccC
Q 043646 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIER 434 (625)
Q Consensus 355 gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~ 434 (625)
+.|..+..+.++++.+ +. +.+.++...+.+++.+.|+++.....+.+. ...+.++.+.+..+. .
T Consensus 308 ~np~~~aaa~a~l~~l--~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~v-rg~Gl~~~i~l~~~~----------~ 371 (423)
T PRK05964 308 ANPLACAAANASLDLF--ED---EPVLERVAALSAGLAEGLEPFRDLPGVADV-RVLGAIGAVELDRPV----------L 371 (423)
T ss_pred cCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEe-ecccEEEEEEeccCc----------c
Confidence 2222233334445544 21 235567777777787777654222111111 113445555553211 0
Q ss_pred CCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 043646 435 NKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILA 514 (625)
Q Consensus 435 ~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~ 514 (625)
.-....+.+.|.+ +||.+.+. .+.+|+++++++|++|||++++
T Consensus 372 --~~~~~~l~~~l~~-~Gv~v~~~----------------------------------~~~lR~~p~l~~t~edId~~v~ 414 (423)
T PRK05964 372 --ERDGPALRAFALE-RGVLLRPL----------------------------------GNTIYLMPPYIITAEELDRITD 414 (423)
T ss_pred --hhHHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEeCCcccCHHHHHHHHH
Confidence 0013467777755 79998631 1569999999999999999999
Q ss_pred HHHHHHHh
Q 043646 515 ALEFIAAY 522 (625)
Q Consensus 515 aL~~~~~~ 522 (625)
++++++.+
T Consensus 415 ~l~~al~~ 422 (423)
T PRK05964 415 AIVEVADE 422 (423)
T ss_pred HHHHHHhh
Confidence 99998865
No 288
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.68 E-value=4.7e-14 Score=152.38 Aligned_cols=343 Identities=11% Similarity=0.087 Sum_probs=194.5
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| ..|+|..+ .|...+.|.+++.+.+......... . ..+...++.+.++++.+. +
T Consensus 31 G~~~~d~dG---~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~----~---~~~~~~~l~~~l~~~~~~--~ 98 (403)
T PRK05093 31 GSRVWDQQG---KEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNV----F---TNEPALRLAKKLIDATFA--E 98 (403)
T ss_pred cCEEEeCCC---CEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCc----c---CCHHHHHHHHHHHhhCCC--C
Confidence 344444444 34777643 5667889999999888543211110 0 123345788888888754 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------CeEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AEVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~vv~ 207 (625)
.++|+.||+.++...+-.++.... + ....+...+|.+....|.+...++...| ..++.
T Consensus 99 -~~~~~~sGseA~e~a~klar~~~~----~-----~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (403)
T PRK05093 99 -RVFFANSGAEANEAAFKLARRYAC----D-----RHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITH 168 (403)
T ss_pred -EEEEeCchHHHHHHHHHHHHHHHh----h-----cCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEE
Confidence 688887899885555433321100 0 0012333355566667776654433211 12333
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCccccC-
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVKINL- 281 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~id~- 281 (625)
++.+ |++++++.+. +++++|+++.+++..|.+.+ +++|.++|++||+++|+|++++ .+...-..
T Consensus 169 ~~~~-----d~~~l~~~l~-----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~ 238 (403)
T PRK05093 169 VPFN-----DLAAVKAVID-----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFA 238 (403)
T ss_pred eCCC-----CHHHHHHHhc-----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh
Confidence 3322 7899998886 57899999954444444434 8999999999999999999977 22211100
Q ss_pred -CCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC-ChhH
Q 043646 282 -RSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG-TPQI 359 (625)
Q Consensus 282 -~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g-t~~~ 359 (625)
...+. .+|+++ +.|.+++...+|++++++++. +.+.+...+ ...+ .|..
T Consensus 239 ~~~~~~-~pdi~s--~sK~l~~G~rig~vv~~~~i~--~~l~~~~~~------------------------~t~~~~~~~ 289 (403)
T PRK05093 239 YMHYGV-TPDILT--SAKALGGGFPIGAMLTTAEIA--SHFKVGTHG------------------------STYGGNPLA 289 (403)
T ss_pred hhhcCC-CCCEEE--ecccccCCcceEEEEEcHHHH--hhcCCCCCC------------------------CCCCCCHHH
Confidence 01111 467654 569997333489999998872 333221100 1122 2333
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
...+.++++++ .. +.+.++.+.+.+++.+.|.++. ...+... ....+.+.+...+.. ..-
T Consensus 290 ~~aa~a~L~~~--~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~G~~~~~~l~~~------------~~~ 350 (403)
T PRK05093 290 CAVAEAVFDII--NT---PEVLEGVKARRQRFVDGLQKINQKYGVFSE--IRGMGLLIGAELKPQ------------YKG 350 (403)
T ss_pred HHHHHHHHHHH--hh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEe--EeeCceEEEEEecCc------------chh
Confidence 33334555554 21 2344566667777777776541 1111111 001133333322211 000
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
...+++..|.+ .||.+.++ ..+++|+++++.+++++++.++++|++
T Consensus 351 ~~~~~~~~l~~-~Gv~v~~~---------------------------------g~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 351 RARDFLNAAAE-EGVMVLVA---------------------------------GPDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred HHHHHHHHHHH-CCeEEecC---------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 24567777765 69988732 137899999998999999999999999
Q ss_pred HHHh
Q 043646 519 IAAY 522 (625)
Q Consensus 519 ~~~~ 522 (625)
++..
T Consensus 397 ~l~~ 400 (403)
T PRK05093 397 AVAK 400 (403)
T ss_pred HHHH
Confidence 8764
No 289
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.67 E-value=9.5e-14 Score=143.12 Aligned_cols=321 Identities=14% Similarity=0.089 Sum_probs=212.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 116 GQRMTKMVHEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 116 ~~~~~~~~~~~~~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
-+...++..++..+++.+++.+++. ...++ +||.+.+..--..+ .+..+. .+-+++.++++...|.+.
T Consensus 115 fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~-G~Ses~l~~~k~~~---------~~r~~~-k~I~~p~iv~~~~v~~a~ 183 (491)
T KOG1383|consen 115 FPVVRKLEAECVNMIANLFNAPSDSCGCGTV-GGSESGLAAKKSYR---------NRRKAQ-KGIDKPNIVTPQNVHAAF 183 (491)
T ss_pred cchhHHHHHHHHHHHHHHhcCCccccCcccc-ccchHHHHHHHHHH---------HHHHhc-cCCCCccccchHHHHHHH
Confidence 3456788899999999999998653 22343 34444232222211 221111 234556799998888888
Q ss_pred HHHHHHcCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHH-cCCEEEEeccC
Q 043646 195 LLSWRQSLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ-YGGFACFDFAA 272 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~-~g~~vivD~A~ 272 (625)
.+..+..+.+++.||+++ +..+|+..+.+.+. .+|.+++.+.++.|+|.+.|+++|.+++-+ +++.+++|++.
T Consensus 184 eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~-----eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~ 258 (491)
T KOG1383|consen 184 EKAARYFEVELREVPLDEGDYRVDPGKVVRMID-----ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACL 258 (491)
T ss_pred HHHHhhEEEEEEeeeccccceEecHHHHHHHhc-----cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccC
Confidence 888888899999999995 67999999999998 589999999999999999999999999999 99999999997
Q ss_pred cCCCc--------cccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCC--CCCcccCCceEEeecccccccc
Q 043646 273 SGPYV--------KINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGS--SPPSTCGGGTVNYVNAFDEKDT 342 (625)
Q Consensus 273 ~~g~~--------~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~--~~p~~~ggg~v~~~~~~~~~~~ 342 (625)
+.-.. ++|++.- ++-.+..+.||+-..|.|+|+++-+.+-..... ...-+.||-....
T Consensus 259 GgFi~p~~~~~~~~fdFr~p---~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~--------- 326 (491)
T KOG1383|consen 259 GGFINPAGYLNEEEFDFRVP---GVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASP--------- 326 (491)
T ss_pred ccccccccccCccccccCCC---CceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCc---------
Confidence 65444 2344332 677889999999888999998877665421111 1222333322100
Q ss_pred ccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccC
Q 043646 343 LYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYST 422 (625)
Q Consensus 343 ~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~ 422 (625)
.-...+.| ..++.+=..++.....|+.+..+++.+.+.++++.+++++++.++++ |.++|.....
T Consensus 327 -----TlngSR~g----~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk------p~vs~~~~~s 391 (491)
T KOG1383|consen 327 -----TLNGSRPG----SQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK------PLVSFILFGS 391 (491)
T ss_pred -----ccccCCcc----cHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC------CcEEEEEccC
Confidence 01111122 12221112222225567778888888999999999999999999987 5677777653
Q ss_pred CCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCC
Q 043646 423 TNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPY 502 (625)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~ 502 (625)
. .++-.++...|. ++|-.+.+=.. |..+-+++..
T Consensus 392 ~-------------~~~i~elsd~l~-~~GW~lnalq~--------------------------------P~a~Hi~vt~ 425 (491)
T KOG1383|consen 392 N-------------DVNIFELSDLLR-KKGWILNALQF--------------------------------PAAIHICVTR 425 (491)
T ss_pred C-------------ccchhhhhHHHH-hcCcCccccCC--------------------------------CCceEEEEEe
Confidence 2 234457788774 46766642221 1223333322
Q ss_pred CCCHHH-HHHHHHHHHHHHHhhhh
Q 043646 503 YMSNEE-FEFILAALEFIAAYGHR 525 (625)
Q Consensus 503 ~~t~ed-id~ll~aL~~~~~~~~~ 525 (625)
.+..++ .|+|+.-|++++++...
T Consensus 426 ~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 426 VHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred eeccHHHHHHHHHHHHHHHHHHHh
Confidence 222233 68888888888887643
No 290
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.67 E-value=2.7e-14 Score=149.56 Aligned_cols=312 Identities=18% Similarity=0.184 Sum_probs=189.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
+++........+++.++++-|+.. .+.|. ||..| |..+...+ +++||. |+++..-|...
T Consensus 57 Y~R~~nPT~~~lE~~~a~LEg~~~--~~afs-SGmaA-I~~~~l~l---------------l~~GD~--vl~~~~~YG~t 115 (396)
T COG0626 57 YSRTGNPTRDALEEALAELEGGED--AFAFS-SGMAA-ISTALLAL---------------LKAGDH--VLLPDDLYGGT 115 (396)
T ss_pred cccCCCccHHHHHHHHHHhhCCCc--EEEec-CcHHH-HHHHHHHh---------------cCCCCE--EEecCCccchH
Confidence 333334455668888888888753 35664 66555 66655555 678985 77777766665
Q ss_pred HHH----HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLS----WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~----~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
..- ++..|+++.+++.. +.+++++++.+ ++|++|.+..|+||+-.+.|+.+|+++||++|++++||.
T Consensus 116 ~~~~~~~l~~~gi~~~~~d~~-----~~~~~~~~~~~----~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDN 186 (396)
T COG0626 116 YRLFEKILQKFGVEVTFVDPG-----DDEALEAAIKE----PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDN 186 (396)
T ss_pred HHHHHHHHHhcCeEEEEECCC-----ChHHHHHHhcc----cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEEC
Confidence 433 34568898888754 45566766662 489999999999999999999999999999999999999
Q ss_pred cCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccccccCCCCCcccCCceEEeeccccccccccccch
Q 043646 271 AASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGT--PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDI 348 (625)
Q Consensus 271 A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (625)
+.+.|+..-.+.- |+|+++.|..|+++|-.- .|+++.+++... ..+..
T Consensus 187 TfatP~~q~PL~~----GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~-~~~~~------------------------- 236 (396)
T COG0626 187 TFATPVLQRPLEL----GADIVVHSATKYLGGHSDVLGGVVLTPNEELY-ELLFF------------------------- 236 (396)
T ss_pred CcccccccChhhc----CCCEEEEeccccccCCcceeeeEEecChHHHH-HHHHH-------------------------
Confidence 9887764333321 899999999999987653 354444554411 00000
Q ss_pred hhhhcCCC-hhHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCC-------------CCCc
Q 043646 349 EERENGGT-PQIVQMIRAALAFWV-KEYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTS-------------VKRQ 412 (625)
Q Consensus 349 ~~~~~~gt-~~~~~~~~aal~~~~-~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~-------------~~~~ 412 (625)
..+...|+ ++.... |++ ....-...+.++..+++..+.++|.+.|.++ |+.|.- ...+
T Consensus 237 ~~~~~~G~~l~p~dA------~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~g 310 (396)
T COG0626 237 AQRANTGAVLSPFDA------WLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYG 310 (396)
T ss_pred HHHhhcCCCCCHHHH------HHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCc
Confidence 01111222 111111 111 0111123334455556888899998888875 665530 1367
Q ss_pred ceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCc---hhhHhhhcCChhhHHHHHHHHHhCCC
Q 043646 413 AILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAG---PYGHTLLAFDQTRSLEIRSAIQKGYL 489 (625)
Q Consensus 413 ~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~g~~ 489 (625)
+.++|.+..+. ....+.+.| +.+.+...-|..-+- |....+-.+..+...+ .
T Consensus 311 g~~Sf~l~~~~---------------~~~~f~~~L-~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~---------~ 365 (396)
T COG0626 311 GLFSFELKNEE---------------AAKKFLDSL-KLFKLAESLGGVESLISHPATMTHASIPLEERAK---------A 365 (396)
T ss_pred eEEEEEeCChH---------------HHHHHHHhC-CccEEeccCCCcccccccccccCcccCCHhHHHh---------c
Confidence 89999986520 133455555 444444444443221 2111111222222111 4
Q ss_pred CCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 490 GVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 490 g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
|+.++.||+|+|. ||++.|++-|++.++
T Consensus 366 Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~ 393 (396)
T COG0626 366 GITDGLVRLSVGL----EDVEDLIADLEQALA 393 (396)
T ss_pred CCCCCeEEEEecC----CCHHHHHHHHHHHHH
Confidence 6778999999996 556666666655543
No 291
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.66 E-value=6.6e-14 Score=151.21 Aligned_cols=344 Identities=13% Similarity=0.089 Sum_probs=197.4
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| ..|+|..+ .|...+.|.+++.+++...... ... + ..+...++.++++++++. +
T Consensus 30 G~~~~d~dG---~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~~~-~-----~~~~~~~la~~l~~~~~~--~ 97 (406)
T PRK12381 30 GSRLWDQQG---KEYIDFAGGIAVNALGHAHPALREALNEQASKFWHT-GNG-Y-----TNEPVLRLAKKLIDATFA--D 97 (406)
T ss_pred cCEEEeCCC---CEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccc-cCc-c-----CCHHHHHHHHHHHhhCCC--C
Confidence 445555544 34788644 5666889999999988643211 111 1 123456788888888754 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCe------------EEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAE------------VVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~------------vv~ 207 (625)
.++|+.+|++++...+-.++.... + ...++...+|......|.....++...+.. +..
T Consensus 98 -~v~~~~sGseA~e~Alk~ar~~~~-----~----~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (406)
T PRK12381 98 -RVFFCNSGAEANEAALKLARKYAH-----D----RYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRH 167 (406)
T ss_pred -eEEEcCCcHHHHHHHHHHHHHHHh-----h----cCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeE
Confidence 789998888885544433331000 0 011222224555566666665444443321 222
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc-----cCHHHHHHHHHHcCCEEEEeccCc-CCCccc--
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY-----SDTRSIARLLHQYGGFACFDFAAS-GPYVKI-- 279 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~-----~~l~~I~~la~~~g~~vivD~A~~-~g~~~i-- 279 (625)
++ ..|+++|++.+. +++++|+++ |.+++|-+ ..+++|.++|++||+++|+|+++. +|....
T Consensus 168 ~~-----~~d~~~l~~~l~-----~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~ 236 (406)
T PRK12381 168 AA-----YNDLNSASALID-----DQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY 236 (406)
T ss_pred eC-----CCCHHHHHHhcc-----CCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh
Confidence 22 237899998886 578888887 55666543 337899999999999999999974 322211
Q ss_pred cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhH
Q 043646 280 NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQI 359 (625)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 359 (625)
.....+. .+|++ ++.|.+++...+|++++++++. +.+.+...+ .+ ..+.|..
T Consensus 237 ~~~~~~v-~pDi~--t~sK~l~gG~~ig~~~~~~~~~--~~~~~~~~~-~t----------------------~~~~pl~ 288 (406)
T PRK12381 237 AYMHYGV-TPDVL--TTAKALGGGFPIGAMLTTEKCA--SVMTVGTHG-TT----------------------YGGNPLA 288 (406)
T ss_pred hhHhhCC-CCCEE--EehhhhhCCCceEEEEEcHHHH--hhcCCCCCC-CC----------------------CCCCHHH
Confidence 1011111 46765 4559997444489999988873 333221100 00 1233333
Q ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 360 VQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 360 ~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
...+.++++++ + .+.+.++.+++.+++.+.|.++. ...++... ...+.++.+...++. .-
T Consensus 289 ~aaa~a~l~~l--~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~v-rg~Gl~~~~~l~~~~-------------~~ 349 (406)
T PRK12381 289 SAVAGKVLELI--N---TPEMLNGVKQRHDWFVERLNTINARYGLFSEI-RGLGLLIGCVLNAEY-------------AG 349 (406)
T ss_pred HHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-ecCeEEEEEEecCch-------------hh
Confidence 33344555554 2 22466777777888888776641 11111110 012233333322110 00
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
....+.+.|.+ +||.+.+. .++.+|+++++.+|++|+++++++|++
T Consensus 350 ~~~~~~~~l~~-~Gv~v~~~---------------------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~ 395 (406)
T PRK12381 350 KAKQISQEAAK-AGVMVLIA---------------------------------GPNVVRFAPALNISEEEITTGLDRFAR 395 (406)
T ss_pred HHHHHHHHHHH-CCcEEeeC---------------------------------CCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 13467777754 79998631 136899999999999999999999999
Q ss_pred HHHhh
Q 043646 519 IAAYG 523 (625)
Q Consensus 519 ~~~~~ 523 (625)
++.+.
T Consensus 396 ~l~~~ 400 (406)
T PRK12381 396 ACERF 400 (406)
T ss_pred HHHHH
Confidence 88654
No 292
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.65 E-value=2.7e-14 Score=144.03 Aligned_cols=340 Identities=14% Similarity=0.159 Sum_probs=219.5
Q ss_pred CcchHHHHHHHHHhhCCCCCC--CCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGN--THTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n--~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
...|+.|++.+.+.+..+.+- .-.+.++.+........++++.++++++.+.+..|+|+.+|.++....+...+
T Consensus 14 a~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nL---- 89 (365)
T COG1932 14 AALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNL---- 89 (365)
T ss_pred ccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhh----
Confidence 345788888888887665431 11123456677888999999999999999998899999889998777776655
Q ss_pred cchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC--eEEEEecCC---CCCCCHHHHHHHHHHhhhCCCCeEEEE
Q 043646 165 PSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA--EVVEIGLDD---NGLLDIEALRSQLELYKAAKRPMLGSF 239 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~--~vv~v~~~~---~~~ld~~~L~~~l~~~~~~~~~~lv~~ 239 (625)
+......-|.....+..+.. -.+..+. .+..+.... ....+++... +. ++...|.+
T Consensus 90 -----------l~~~~~~yv~~g~Ws~~a~~-eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-----~~~ayv~~ 150 (365)
T COG1932 90 -----------LGKRGTDYVDTGAWSEFAIK-EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-----DNDAYVHF 150 (365)
T ss_pred -----------hcccCceeEeeeehhHhHHH-HHHHhcccccccccceeccCccCCCChhhcc--cC-----CCccEEEE
Confidence 22222101333333333322 1222332 222222111 1234444322 22 23556999
Q ss_pred ecccCccccccCH-HHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecccccc
Q 043646 240 SACSNVTGIYSDT-RSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQL 318 (625)
Q Consensus 240 ~~~~n~TG~~~~l-~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l 318 (625)
|+..+.+|+-.|- ..+.. +.++++|..+.+...++|+. .+|++.++.+|.+| |.|++++++++++ +
T Consensus 151 ~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr~iDvs-----k~dviyagaQKnlG-paGltvvIvr~~~--l 217 (365)
T COG1932 151 CWNETISGVEVPELPDIGS-----DGLLVADASSAILSRPIDVS-----KYDVIYAGAQKNLG-PAGLTVVIVRPDL--L 217 (365)
T ss_pred ecCCcccceEccCCCCCCC-----CceEEEecccHHhcCCCChh-----HcceEEEehhhccC-ccceEEEEEcHHH--H
Confidence 9999999998662 22211 28999999999999999997 56999999999998 8889999999999 4
Q ss_pred CCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHH--HHHHHHhhcCHHHHHHHHHHHHHHHHHhhC
Q 043646 319 GSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAA--LAFWVKEYIGYEVIKKQEDVYIESALGRIL 396 (625)
Q Consensus 319 ~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aa--l~~~~~~~~g~~~i~~~~~~l~~~l~~~L~ 396 (625)
.+..+..+ .....|...........||++..+.... +.| +++..|.+.+.+|.+..++.+++.+.
T Consensus 218 ~r~~~~~~------------P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~W-lk~~GGl~~~~~rn~~ka~~LY~~id 284 (365)
T COG1932 218 ERAESYTL------------PSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKW-LKSQGGLEALEARNQAKAQLLYDWID 284 (365)
T ss_pred hcccccCC------------chHhhchhhhccCCccCCcHHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44433210 0011222223344456789988876444 444 45778999999999999999999998
Q ss_pred CCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhh
Q 043646 397 PNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTR 476 (625)
Q Consensus 397 ~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~ 476 (625)
+.+-..-......+..-+++|.+.... ++.. +++.+.+ .|+..-.|. .
T Consensus 285 ~s~fy~~~v~~~~RS~mnV~f~~~~~~--------------ld~~-fv~eae~-~gl~~lkGh--------r-------- 332 (365)
T COG1932 285 KSDFYRNLVAKANRSRMNVTFTLVDAE--------------LDKG-FVAEAEA-AGLIYLKGH--------R-------- 332 (365)
T ss_pred hCCccccccchhhccceeEEEEcCcHH--------------HHHH-HHHHHHH-cCCceeccc--------c--------
Confidence 864443332222344556777765421 3333 4444433 466554442 1
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 477 SLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 477 ~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
..|.+|+|+...+..++++.|++.|+++.+.
T Consensus 333 ---------------~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 333 ---------------SVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ---------------CCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 1355999999999999999999999987654
No 293
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=1.2e-13 Score=150.58 Aligned_cols=345 Identities=15% Similarity=0.133 Sum_probs=205.3
Q ss_pred ccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+++..|+ -|+|..+ .|..++.|.+++.+++......+. + ...+...++.++|++++....+
T Consensus 74 ~~l~D~dG~---~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~---~----~~~~~~~~lae~L~~~~p~~~~- 142 (459)
T PRK11522 74 NTLVDTQGQ---EFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ---E----LLDPLRAMLAKTLAALTPGKLK- 142 (459)
T ss_pred EEEEECCCC---EEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc---c----cCCHHHHHHHHHHHHhCCCCCC-
Confidence 455555553 4888533 456678999999998864311111 1 1234455677778777654333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcC-CCCchhHHHHHHcCCe------------EEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGP-YEHHSNLLSWRQSLAE------------VVE 207 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~-~~h~s~~~~~~~~G~~------------vv~ 207 (625)
.+.|+.+|+.+.-.++-.++... -+.|. ..|+... .+|......+...|-. +..
T Consensus 143 ~v~f~~SGsEAve~AlklAr~~t------------~~~gr-~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK11522 143 YSFFCNSGTESVEAALKLAKAYQ------------SPRGK-FTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRH 209 (459)
T ss_pred EEEEeCCchHHHHHHHHHHHHHh------------ccCCC-cEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcc
Confidence 78999888887333332222100 01122 2355544 4555444333332211 112
Q ss_pred EecCCCCCCCHHHHHHHHHHhh-hCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCccc--
Q 043646 208 IGLDDNGLLDIEALRSQLELYK-AAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVKI-- 279 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~-~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~i-- 279 (625)
+|. -|.++++++++... ..+++.+|++..+....|.+.| ++++.++|++||+++|+|+++. +|-..-
T Consensus 210 ~~~-----~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~ 284 (459)
T PRK11522 210 VPF-----GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF 284 (459)
T ss_pred cCC-----CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh
Confidence 221 26788888886421 1245789999999999999988 8999999999999999999985 221110
Q ss_pred cCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCC--CcccCCceEEeeccccccccccccchhhhhcCCC
Q 043646 280 NLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSP--PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGT 356 (625)
Q Consensus 280 d~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~--p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt 356 (625)
-....+. .+|+++++ |.+|+. ..+|++++++++.. ... +... +.| ..|.
T Consensus 285 a~e~~gv-~PDivt~g--K~lggG~~Pigav~~~~~i~~--~~~~~~~~~-~~T----------------------~~gn 336 (459)
T PRK11522 285 ACEHENV-QPDILCLA--KALGGGVMPIGATIATEEVFS--VLFDNPFLH-TTT----------------------FGGN 336 (459)
T ss_pred hhhccCC-CCCEEEec--hhhhCCCccceeEEEcHHHHH--HhccCCccc-CCC----------------------CCCC
Confidence 1111111 47988665 999763 23688888887732 211 1110 001 1234
Q ss_pred hhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----Cc-E-EEeCCCCCCCcceEEEEeccCCCCCCccc
Q 043646 357 PQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QN-I-QVLGNTSVKRQAILSFLVYSTTNSSPENM 430 (625)
Q Consensus 357 ~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~g-v-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~ 430 (625)
|..++.+.+.++.+ +. +.+.++.+.+.+++++.|+++ |. + .+-+ ++.++.+.+..+.
T Consensus 337 p~~~Aaala~L~~i--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG-----~Gl~~giel~~~~------- 399 (459)
T PRK11522 337 PLACAAALATINVL--LE---QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARG-----KGMLMAIEFVDNE------- 399 (459)
T ss_pred HHHHHHHHHHHHHH--hc---chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEe-----ceeEEEEEecCch-------
Confidence 44444445666665 22 245677788888888877654 21 1 2222 3455555553321
Q ss_pred cccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 431 KIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 431 ~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
....+.+.|.+ +||.+.+.. . ....+|+.++..+|++|++
T Consensus 400 --------~~~~i~~~l~~-~Gvl~~~~~-~------------------------------~~~~lr~~Ppl~~t~~~id 439 (459)
T PRK11522 400 --------IGYNFASEMFR-QRVLVAGTL-N------------------------------NAKTIRIEPPLTLTIEQCE 439 (459)
T ss_pred --------HHHHHHHHHHH-CCeEEEecC-C------------------------------CCCEEEEECCccCCHHHHH
Confidence 13467777765 799986321 0 1378999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 043646 511 FILAALEFIAAYGHR 525 (625)
Q Consensus 511 ~ll~aL~~~~~~~~~ 525 (625)
+++++|++++.+..+
T Consensus 440 ~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 440 QVLKAARKALAAMRV 454 (459)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999877544
No 294
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.64 E-value=2.4e-13 Score=151.83 Aligned_cols=314 Identities=15% Similarity=0.089 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
.....++++..|+.+|++.. ...+ +|||.++..++.++ +.+||. |++....|-|+..++.
T Consensus 194 ~G~i~eAe~~AA~~fgAd~t--yfvv-NGTS~~n~av~~a~---------------~~~Gd~--VLvdRN~HKSv~haLi 253 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRS--YMVT-NGTSTANKIVGMYS---------------APAGST--VLIDRNCHKSLTHLMM 253 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcE--EEEe-CchHHHHHHHHHHh---------------cCCCCE--EEeecccHHHHHHHHH
Confidence 34678899999999999744 4444 89999888887776 578995 9999999999999999
Q ss_pred HcCCeEEEEecCCC-----CCCC-----HHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEe
Q 043646 200 QSLAEVVEIGLDDN-----GLLD-----IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFD 269 (625)
Q Consensus 200 ~~G~~vv~v~~~~~-----~~ld-----~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD 269 (625)
+.|+.+++++...+ +.++ .+.++++|.+.....+|+.++++++ |..|.+.+++.|.++||.++ ++||
T Consensus 254 lsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvD 330 (714)
T PRK15400 254 MSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFD 330 (714)
T ss_pred HcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEE
Confidence 99999999876532 2345 8999999986422234557888776 78899999999999999887 6999
Q ss_pred ccCcCCC--ccc--cCCCCCCCCC---c--EEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccc
Q 043646 270 FAASGPY--VKI--NLRSRNIDGY---D--AIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEK 340 (625)
Q Consensus 270 ~A~~~g~--~~i--d~~~~~~~~~---D--~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (625)
+||+.-. .+. +...+. .+. | +++-|.||.+++....++|.++..+ .
T Consensus 331 EAwgah~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v-d----------------------- 385 (714)
T PRK15400 331 SAWVPYTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV-N----------------------- 385 (714)
T ss_pred ccchhhhccCcccCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCCC-C-----------------------
Confidence 9987421 121 111111 234 5 8889999999877665666553321 0
Q ss_pred ccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc------EEEeCCCCCCC-
Q 043646 341 DTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN------IQVLGNTSVKR- 411 (625)
Q Consensus 341 ~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g------v~v~~~~~~~~- 411 (625)
+..+...-.-+...+|++.-++ -.+.+++. ...|. .+.+...+++..+++.|.++++ ++++.+.....
T Consensus 386 -~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~-~~~G~-~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~ 462 (714)
T PRK15400 386 -EETFNEAYMMHTTTSPHYGIVASTETAAAMMK-GNAGK-RLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTT 462 (714)
T ss_pred -HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-hhhhH-HHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccc
Confidence 0000000011222334433322 22333321 12343 4555666678888888887776 77765321000
Q ss_pred ------------------------cceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhH
Q 043646 412 ------------------------QAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGH 467 (625)
Q Consensus 412 ------------------------~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~ 467 (625)
-|+=..+..++.+ ..+.-...++.+..+.+.| +++||.+--.
T Consensus 463 ~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~----~~g~~~~~Gipg~~v~~~L-~e~gI~~E~~--------- 528 (714)
T PRK15400 463 ECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMK----KDGTMSDFGIPASIVAKYL-DEHGIVVEKT--------- 528 (714)
T ss_pred hhcccCccccccCcccccccccccCCceEEEEeCCCC----CCccccccCCCHHHHHHHH-HHcCCEEEec---------
Confidence 0110001111100 0000112577788888888 5689987521
Q ss_pred hhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 468 TLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 468 ~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
....+=+-++...|++++++|+++|.++-+.
T Consensus 529 ------------------------d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 529 ------------------------GPYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred ------------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 1355666677778999999999999987544
No 295
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.64 E-value=6.6e-13 Score=148.31 Aligned_cols=313 Identities=14% Similarity=0.092 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
....++++..|+.+|++.. ..++ +|||.++..++.+. +.+||. |++....|-|+..++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~t--yfvv-NGTS~~n~av~~a~---------------~~~Gd~--VLvdRN~HKSv~~aLil 254 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQS--YIVT-NGTSTSNKIVGMYA---------------APAGST--LLIDRNCHKSLAHLLMM 254 (713)
T ss_pred hHHHHHHHHHHHHhCCCcE--EEEe-CChHHHHHHHHHHh---------------cCCCCE--EEeecccHHHHHHHHHH
Confidence 4677899999999999744 4444 89999888887776 689996 99999999999999999
Q ss_pred cCCeEEEEecCC--C---CCCCH-----HHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEE-EEe
Q 043646 201 SLAEVVEIGLDD--N---GLLDI-----EALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFA-CFD 269 (625)
Q Consensus 201 ~G~~vv~v~~~~--~---~~ld~-----~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~v-ivD 269 (625)
.|+.+++++... . +.++. +.++++|.++....+|+.++++++ |..|++.++++|+++| |+.+ +||
T Consensus 255 sga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvD 330 (713)
T PRK15399 255 SDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFD 330 (713)
T ss_pred cCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEe
Confidence 999999987553 2 24555 889999986422245678888876 7889999999999999 6766 799
Q ss_pred ccCcCC--Cccc--cCCCCC-CCCCcEE---EEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccc
Q 043646 270 FAASGP--YVKI--NLRSRN-IDGYDAI---FLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 270 ~A~~~g--~~~i--d~~~~~-~~~~D~v---~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (625)
+||+.- ..+. +...+. ..++|.+ +-|.||.+++....++|.++..+ ..+.
T Consensus 331 EAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v-d~~~--------------------- 388 (713)
T PRK15399 331 SAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY-DEET--------------------- 388 (713)
T ss_pred ccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC-CHHH---------------------
Confidence 998742 1121 111111 1145766 88999999888777888775432 0000
Q ss_pred cccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc------EEEeCCCCCCC--
Q 043646 342 TLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN------IQVLGNTSVKR-- 411 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g------v~v~~~~~~~~-- 411 (625)
+...-.-+...+|++.-++ -.+.+++. ...|. .+.++..+++..+++.|.++.+ ++++.+.....
T Consensus 389 ---~n~a~~m~~STSPsY~LmASLD~a~~~m~-~~~G~-~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~ 463 (713)
T PRK15399 389 ---FNEAFMMHTSTSPSYPIVASVETAAAMLR-GNPGK-RLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAE 463 (713)
T ss_pred ---HHHHHHHHcCCCcHHHHHHHHHHHHHHHH-hhhhH-HHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCcc
Confidence 0000011222334433322 22222221 12343 4555666667788888877655 56665421000
Q ss_pred -----------------------cceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHh
Q 043646 412 -----------------------QAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHT 468 (625)
Q Consensus 412 -----------------------~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~ 468 (625)
-|+=.....++.+ ..+.-...++.+..+.+.| +++||.+--.
T Consensus 464 ~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~----~~g~~~~~Gi~g~~l~~~L-~e~gI~~E~~---------- 528 (713)
T PRK15399 464 CWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMD----EQGNMSEEGIPAALVAKFL-DERGIVVEKT---------- 528 (713)
T ss_pred ceecCCCcccccccccccccccCCCceEEEEecCcc----cccccccCCCCHHHHHHHH-HHcCCEEEec----------
Confidence 0110001111100 0000123478888899988 5689998521
Q ss_pred hhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 469 LLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 469 ~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
....+=+-++...|++++++|+++|.++-+.
T Consensus 529 -----------------------d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 529 -----------------------GPYNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred -----------------------CCCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 1245666667778999999999999988543
No 296
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.64 E-value=2.8e-16 Score=166.32 Aligned_cols=421 Identities=15% Similarity=0.073 Sum_probs=275.2
Q ss_pred eEeccCCCCCcchHHHHHHHHHhh-CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHH
Q 043646 78 LTYADHTASGRSLRYIEDYIINNV-LPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKR 155 (625)
Q Consensus 78 ~~Yld~~~~~~~p~~v~ea~~~~l-~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~-~vift~sGttaal~~ 155 (625)
..|+||+..+...+..++.+.... .....|||+. ...+..+.+.+.++|-++..+++....+ +++|+ . ++++++.
T Consensus 21 ~~yldhag~tl~sesq~~g~~~~sq~~e~~nphs~-~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp-~-~t~al~~ 97 (728)
T KOG2142|consen 21 LAYLDHAGRTLFSESQLEGVAFQSQSSENANPHSH-LGTSRSLARLVAQVRLRILALFNTTAFDYEVSLP-A-LTEALKL 97 (728)
T ss_pred HHHHHhhhhhhhhhcccchhhhhhhccccCCCccc-ccchHHHHHHHHHHHHHHHHHhccccccccchhH-H-HHHHHHH
Confidence 349999998888777766644333 3345788874 4566777889999999999999987655 89998 4 9999999
Q ss_pred HHHHhcccccchhhhhhhhccCCCCc-eEEEEcCCCCchhHH-HHH--HcCCeEEEE-ecCC---CCCCCHHHHHHHHHH
Q 043646 156 LQEVMGITVPSIMRDKLITSLRDEER-WVVFLGPYEHHSNLL-SWR--QSLAEVVEI-GLDD---NGLLDIEALRSQLEL 227 (625)
Q Consensus 156 l~~~l~~~~~~~~~~~~~~~l~~gd~-~~Vlv~~~~h~s~~~-~~~--~~G~~vv~v-~~~~---~~~ld~~~L~~~l~~ 227 (625)
+++++.+.. .+.+ ..+=...+.|.+... .++ ..|..+..+ .... ....++.+...-+
T Consensus 98 vae~fp~~s-------------~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~l-- 162 (728)
T KOG2142|consen 98 VAEAFPFYS-------------QTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANL-- 162 (728)
T ss_pred HHHhCcccc-------------ccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCc--
Confidence 999985322 2221 012233455555431 121 234433333 2111 1111111111111
Q ss_pred hhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCce
Q 043646 228 YKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPG 307 (625)
Q Consensus 228 ~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G 307 (625)
....+....+.+|..|.....+.+-.+.-..+.++++|.|..+...+++.... .+|++.. ++|.||.|. |
T Consensus 163 ----s~~~L~~g~a~~nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy---~f~~~~~-lltiFgyet--g 232 (728)
T KOG2142|consen 163 ----SEHSLFGGAAQSNFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESY---PFDFNPK-LLTIFGYET--G 232 (728)
T ss_pred ----ccchhcccchhcccccceeeeeeecccccCCceEEEEEeecccccccchHhhC---CCcccch-heeecCCCc--h
Confidence 23568888889999998644444434443568899999999999999999887 8899999 999999998 5
Q ss_pred EEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhh--cCHHHHHHHHH
Q 043646 308 ILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEY--IGYEVIKKQED 385 (625)
Q Consensus 308 ~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~--~g~~~i~~~~~ 385 (625)
.+.+.++... . .||++.++...|.. .......+.+|++.|+.+...+++.-..|-..++ .++..+..+..
T Consensus 233 Avlv~~r~A~---~----~Ggkt~sa~f~wp~-~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~ 304 (728)
T KOG2142|consen 233 AVLVMNRSAE---L----KGGKTASAEFSWPM-LYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTL 304 (728)
T ss_pred hhHHHhhhhH---h----hcCccceeecccch-HHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHH
Confidence 5555555421 1 28888776655532 2233356789999999887766543222222233 36788888888
Q ss_pred HHHHHHHHhhCCC----CcEEEeCCC---CCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecC
Q 043646 386 VYIESALGRILPN----QNIQVLGNT---SVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGG 458 (625)
Q Consensus 386 ~l~~~l~~~L~~l----~gv~v~~~~---~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G 458 (625)
.+++++.-.|... |.+++++.. ++.+++++.|++..++ +.++...+|.+.. .+||+.++|
T Consensus 305 al~~~whvlLda~~lG~kdmd~yglS~f~Pdfqg~sf~fv~g~d~-----------psgfGcl~VkKs~--i~~l~lrtG 371 (728)
T KOG2142|consen 305 ALANNWHVLLDALALGPKDMDSYGLSLFQPDFQGPSFYFVFGRDD-----------PSGFGCLEVKKSA--ISGLELRTG 371 (728)
T ss_pred HHhhhHHHHHhhhccCcchHhhhhhhccCccceeeeEEEEeccCC-----------CCceeeeeeehhh--hhceeccCC
Confidence 8888888888654 334444322 2568899999987653 3445555666655 589999999
Q ss_pred CCCCchhhHhhhcCChhhHHHHHHHHH--hCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh-------------
Q 043646 459 CACAGPYGHTLLAFDQTRSLEIRSAIQ--KGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG------------- 523 (625)
Q Consensus 459 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~------------- 523 (625)
|+|+.+.++..+++..+++.+..++.. ..++|.+ ++ +++.+++|++.++.++..-.-+-
T Consensus 372 cfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~dg~~-----~s-~~~~~~~~~~a~~~~~v~~~~~T~~lm~~~~~se~e 445 (728)
T KOG2142|consen 372 CFCNIGACKIYPGLYLEMSQKGLSAGKGCGDNDGQP-----VS-GYMQTPADVGAYLSAQVSDVLETDPLMKSPVFSEQE 445 (728)
T ss_pred CCCCCcceeecccccHHHHHHHhhhccccccCCCCc-----cc-ccccchhhhhHHHHHhhhhhhhccccccccccchhh
Confidence 999999999999988777665333211 1235554 77 99999999999999886633111
Q ss_pred ---h-hccc--------------Ccccccc-----cccccccccchhhhhhhhcc
Q 043646 524 ---H-RFLP--------------LYHFNVK-----AGNWCSSQKAIKDLIDKETN 555 (625)
Q Consensus 524 ---~-~~~~--------------~y~~~~~-----~~~w~~~~~~~~~~~~~~~~ 555 (625)
. ...| .+.++++ --+|+-..++++|| |+||
T Consensus 446 ~~~n~~a~Pl~~~~~~~R~~d~~~~s~~~~~~~~EI~~~~~~~~gl~~~--~s~m 498 (728)
T KOG2142|consen 446 DSDNGIATPLLERVQLKRHFDAAVASYPIKCAAFEIEEENSGSQGLKYD--RSWM 498 (728)
T ss_pred hccccccCCcchhhcccchhhhhhhhhhhhhceeEeeccCccccccccc--cccc
Confidence 0 1112 3455666 22666679999999 9998
No 297
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=1.9e-13 Score=148.95 Aligned_cols=356 Identities=14% Similarity=0.091 Sum_probs=201.2
Q ss_pred ccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+.+..|+ -|+|..+. |..++.|.+++.+++......+.. ....+...++.++|++++....+
T Consensus 35 ~~l~d~dG~---~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~------~~~~~~~~~la~~L~~~~~~~~~- 104 (433)
T PRK08117 35 CYYYGVDGK---EYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG------VIYYESILKLAEELAEITPGGLD- 104 (433)
T ss_pred eEEEeCCCC---EEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc------ccCCHHHHHHHHHHHHhCCCCCC-
Confidence 444444453 48886544 346789999999988543111110 11234567788888888843333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC-------------CeEEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL-------------AEVVE 207 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G-------------~~vv~ 207 (625)
.+.|+.||+.++...+-.++. . .|.+.+|.+....|.+...++...+ ..+..
T Consensus 105 ~v~f~~SGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 169 (433)
T PRK08117 105 CFFFSNSGAEAIEGALKLAKH--------------V-TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQ 169 (433)
T ss_pred EEEEeCcHHHHHHHHHHHHHH--------------h-cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEE
Confidence 789988899985555543331 1 2222245556666776654432221 01233
Q ss_pred EecCCCCC------------CCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEecc
Q 043646 208 IGLDDNGL------------LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 208 v~~~~~~~------------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A 271 (625)
+|...... -++++|++.+++....+++.+|++..+....|.+.| +++|.++|++||+++|+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv 249 (433)
T PRK08117 170 APYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEV 249 (433)
T ss_pred eCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 44321110 156667777753112246889999999999999988 99999999999999999999
Q ss_pred CcCCCcccc----CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 272 ASGPYVKIN----LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 272 ~~~g~~~id----~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
++. ..... ....+. .+|++ ++.|.+++...+|+++.++++. ..+.... .+.+
T Consensus 250 ~tG-~gr~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~i~--~~~~~~~-~~~T----------------- 305 (433)
T PRK08117 250 QTG-FGRTGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKELM--EQWPLGS-HGTT----------------- 305 (433)
T ss_pred hhc-cCccccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHHHH--hhccCCC-CCCC-----------------
Confidence 873 21111 111111 35765 5569997433478889888873 2221111 0111
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc-EEEeCCCCCCCcceEEEEeccCCCCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN-IQVLGNTSVKRQAILSFLVYSTTNSS 426 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g-v~v~~~~~~~~~~i~~f~~~~~~~~~ 426 (625)
..+.|.....+.++++.+ +. +.+.++.+.+.+++.+.|.++.. ..+.... ...+-++.+.+..+..
T Consensus 306 -----~~~np~~~aaa~a~L~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~Gl~~gi~~~~~~~-- 372 (433)
T PRK08117 306 -----FGGNPVACAAALATLEVI--KE---EKLLDNANEMGAYALERLEVLKEKHPVIGDV-RGIGLMIGIEIVDPDG-- 372 (433)
T ss_pred -----CCcCHHHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHhcCCceeee-ecCCcEEEEEEecCCC--
Confidence 023333333344555544 21 24555666667777776654310 1111110 1122233333322110
Q ss_pred CccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCH
Q 043646 427 PENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSN 506 (625)
Q Consensus 427 ~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ 506 (625)
....-....+.+.+.+ +||.+.+. + + ..+.+|++++..+|+
T Consensus 373 -------~~~~~~~~~~~~~l~~-~Gv~~~~~---g-~---------------------------~~~~lRl~p~~~~t~ 413 (433)
T PRK08117 373 -------EPDGDAVEKILDKCLE-KGLLFYLC---G-N---------------------------AGNVLRMIPPLTVTK 413 (433)
T ss_pred -------CcchHHHHHHHHHHHH-CCCEEeec---C-C---------------------------CCCEEEEeCCccCCH
Confidence 0000113456677755 69887531 1 0 137899999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 043646 507 EEFEFILAALEFIAAYG 523 (625)
Q Consensus 507 edid~ll~aL~~~~~~~ 523 (625)
+|+++++++|.+++.+.
T Consensus 414 ~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 414 EEIDEGLDILDEALTEY 430 (433)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987653
No 298
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.64 E-value=2.4e-13 Score=149.47 Aligned_cols=368 Identities=15% Similarity=0.095 Sum_probs=203.9
Q ss_pred CccccCCCCCCceEeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..| .-|+|.. ..|...+.|.+++.+++...... +. ......+...++.++|.+++....-
T Consensus 80 G~~l~D~dG---~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~-~~----~~~~~~~~~~~lae~L~~~~~~~~~ 151 (504)
T PLN02760 80 GSYVYDING---KKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFY-HS----FWNRTTKPSLDLAKELLEMFTARKM 151 (504)
T ss_pred eeEEEECCC---CEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccce-ec----ccccCcHHHHHHHHHHHhhcCCCCC
Confidence 445555444 3488843 44567889999999988643111 11 0011234456677777777532222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCe------------EEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAE------------VVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~------------vv~ 207 (625)
+.+.|+.+|++++..++-.++... . ..-.++.+.+|.....+|.+...++...|.. +..
T Consensus 152 ~~v~f~~SGsEA~e~AlKlAr~~~-------~--~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~ 222 (504)
T PLN02760 152 GKVFFTNSGSEANDTQVKLVWYYN-------N--ALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLH 222 (504)
T ss_pred CEEEEeCChHHHHHHHHHHHHHHH-------H--hcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEE
Confidence 278888888888554443332100 0 0001333335666667777766555433321 222
Q ss_pred EecCCC------C-------CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 208 IGLDDN------G-------LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 208 v~~~~~------~-------~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
++.+.. + ....++|++++.+ ...+++.+|++..+....|.+.| +++|.++|++||+++|+|+
T Consensus 223 ~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DE 301 (504)
T PLN02760 223 TDCPHYWRFHLPGETEEEFSTRLADNLENLILK-EGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADE 301 (504)
T ss_pred eCCCcccccCCCCCcHHHHHHHHHHHHHHHHHh-cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecc
Confidence 222110 0 0112456776642 12246789999999988999988 9999999999999999999
Q ss_pred cC-cCCCccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 271 AA-SGPYVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 271 A~-~~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
++ ++|-... .....+. .+|+++++ |.+|+.. .+|++++++++. +.+.+.....+.+
T Consensus 302 V~TGfGRtG~~~a~e~~gv-~PDivtlg--K~lggG~~PigAv~~~~~i~--d~~~~~~~~~~~~--------------- 361 (504)
T PLN02760 302 VICAFGRLGTMFGCDKYNI-KPDLVSLA--KALSSAYMPIGAVLVSPEIS--DVIHSQSNKLGSF--------------- 361 (504)
T ss_pred hhhCCcccchhhHHHhcCC-CCcEEEec--ccccCCccccceEeecHHHH--hhhhcccccccCc---------------
Confidence 98 4543221 1111111 47987776 9997632 367888888873 2222110000000
Q ss_pred chhhhhc-CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCC
Q 043646 347 DIEEREN-GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNS 425 (625)
Q Consensus 347 ~~~~~~~-~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~ 425 (625)
..... .|.|..++...+.++.+. . +.+.++.+.+.+++++.|.++....+++.. ...+.++.+.+..+..
T Consensus 362 --~h~~T~~gnPl~~Aaala~Le~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~~~~- 432 (504)
T PLN02760 362 --AHGFTYSGHPVSCAVALEALKIYK--E---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEI-RGTGLILGTEFVDNKS- 432 (504)
T ss_pred --ccCCCCCCCHHHHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeE-EeCceEEEEEEecCCc-
Confidence 00011 233444444455566552 2 245667777777777777654211111111 1133444444432210
Q ss_pred CCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 426 SPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 426 ~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
...... ...+.+.+.+ +||.+++. ...+|+++
T Consensus 433 --------~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~----------------------------------g~~lrl~P 469 (504)
T PLN02760 433 --------PNDPFPAEWGVGAYFGAECKK-RGMLVRVA----------------------------------GDNIMMSP 469 (504)
T ss_pred --------ccccccchhHHHHHHHHHHHh-CCcEEEec----------------------------------CCEEEEEC
Confidence 000010 2346666644 79988631 14689999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhh
Q 043646 501 PYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 501 ~~~~t~edid~ll~aL~~~~~~~ 523 (625)
++.+|++|+|++++++++++...
T Consensus 470 pl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 470 PLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988664
No 299
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.63 E-value=8.1e-14 Score=141.11 Aligned_cols=295 Identities=15% Similarity=0.114 Sum_probs=191.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH-cCCeEEEEecCC--CC
Q 043646 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ-SLAEVVEIGLDD--NG 214 (625)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-~G~~vv~v~~~~--~~ 214 (625)
++ .++++ +|+|++...++-.+ .+|||. .+++.++|+....-++. .|++++.|.+.. +.
T Consensus 146 P~-~~Vv~-~G~T~ane~l~fcL---------------adpgda--fLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f 206 (471)
T KOG0256|consen 146 PE-RVVVT-NGATSANETLMFCL---------------ADPGDA--FLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGF 206 (471)
T ss_pred cc-ceEEe-cccchhhHHHHHHh---------------cCCCce--eeecCCCCCcccccceeccCceEEEEEeecCCCc
Confidence 44 78888 78888888888777 479996 99999999998765554 499999998875 34
Q ss_pred CCCHHHHHHHHHHhhh-CCCCeEEEEecccCccccccCHH---HHHHHHHHcCCEEEEeccCcCCCcc----cc---CCC
Q 043646 215 LLDIEALRSQLELYKA-AKRPMLGSFSACSNVTGIYSDTR---SIARLLHQYGGFACFDFAASGPYVK----IN---LRS 283 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~-~~~~~lv~~~~~~n~TG~~~~l~---~I~~la~~~g~~vivD~A~~~g~~~----id---~~~ 283 (625)
.+++++||+++.+.+. +.+.+-|++++|+||-|++.+-+ .+..++.++++.+|+|+.++...-. +. +..
T Consensus 207 ~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~ 286 (471)
T KOG0256|consen 207 QITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRK 286 (471)
T ss_pred cccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhh
Confidence 8999999999986443 34679999999999999998755 4566777999999999986642211 11 111
Q ss_pred CCCCCCc--EEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 284 RNIDGYD--AIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 284 ~~~~~~D--~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
......| -++.|.+|=||-|+ ..|+++..++-+- ....+. .+| ....+..
T Consensus 287 ~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vv-saA~km-------------------------ssf-~~vSs~t 339 (471)
T KOG0256|consen 287 DPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVV-SAATKM-------------------------SSF-GLVSSQT 339 (471)
T ss_pred ccccCCCcEEEEEEeccccCCCceEEEEEEecChHHH-HHHHHH-------------------------hhc-cCCcHHH
Confidence 0000222 46778999999886 4899998766521 000000 000 0111222
Q ss_pred HHHHHH---HHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC
Q 043646 361 QMIRAA---LAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP 437 (625)
Q Consensus 361 ~~~~aa---l~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~ 437 (625)
+-..+. =+.+. ........+|.+..-+++.+.|+++ ||..+.. .+++++|.-..... .+.+.
T Consensus 340 Q~~la~LLSD~~f~--~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s----~AGlF~wvDlr~lL--------~s~tf 404 (471)
T KOG0256|consen 340 QYLLASLLSDEEFT--REYLRENNKRLRIRHRYIVEGLKAL-GIPCLKS----NAGLFCWVDLRKLL--------TSLTF 404 (471)
T ss_pred HHHHHHHhchHHHH--HHHHHHHHHHHHHHHHHHHhhHHhc-CCceeec----CCeeEEEEEhHHhc--------CcCCh
Confidence 211111 01111 1123344555566667788888887 7777654 45788887654321 11122
Q ss_pred CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 438 LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 438 l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
-.-.++.+.+.+.-++.+.+|.+|- |+ .|||+|++|.- +.++.++-.++.|+
T Consensus 405 e~El~Lw~~i~~~vklnlSpG~s~~---C~------------------------EpGWFRvcFAn-~~~~t~~~am~Ri~ 456 (471)
T KOG0256|consen 405 EGELELWERILDNVKLNLSPGSSCH---CH------------------------EPGWFRVCFAN-MSEETLEVAMRRLK 456 (471)
T ss_pred HHHHHHHHHHHHhhccccCCCCcce---ec------------------------CCCeEEEEecc-CCHHHHHHHHHHHH
Confidence 2234677777787799999998874 44 47999999973 45566666888888
Q ss_pred HHHH
Q 043646 518 FIAA 521 (625)
Q Consensus 518 ~~~~ 521 (625)
.++.
T Consensus 457 ~~~~ 460 (471)
T KOG0256|consen 457 QFLD 460 (471)
T ss_pred HHHH
Confidence 7776
No 300
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.63 E-value=6.3e-13 Score=143.90 Aligned_cols=340 Identities=15% Similarity=0.114 Sum_probs=198.9
Q ss_pred ccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+++..|+ -|+|..+ .|...+.|.+++.+++......+ .+ ...+...++.++|++.+....+
T Consensus 67 ~~l~D~dG~---~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~~----~~~~~~~~lAe~L~~~~p~~~~- 135 (442)
T TIGR03372 67 NTLIDTQGN---EFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---QE----LLDPLRALLAKTLAALTPGKLK- 135 (442)
T ss_pred eEEEECCCC---EEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---cc----cCCHHHHHHHHHHHHhCCCCcC-
Confidence 456665553 4888533 45678899999999886432111 11 1134455677778777654333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVEI 208 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v 208 (625)
.+.|+.||+.++-..+-.++... -..|...+|......|.....++...+- .+..+
T Consensus 136 ~v~f~~SGsEA~e~AlklAr~~t------------~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~ 203 (442)
T TIGR03372 136 YSFFCNSGTESVEAALKLAKAYQ------------SPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHV 203 (442)
T ss_pred EEEEeCCchHHHHHHHHHHHHHH------------hhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEe
Confidence 78999888887333332222100 0123222344444555555444433221 12333
Q ss_pred ecCCCCCCCHHHHHHHHHHh-hhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCccc--c
Q 043646 209 GLDDNGLLDIEALRSQLELY-KAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVKI--N 280 (625)
Q Consensus 209 ~~~~~~~ld~~~L~~~l~~~-~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~i--d 280 (625)
|.+ |.+++++.+++. ...+++.+|++..+....|.+.| +++|.++|++||+++|+|+++. +|-... -
T Consensus 204 p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a 278 (442)
T TIGR03372 204 AFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFA 278 (442)
T ss_pred CCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchh
Confidence 322 677888777531 12246789999999999999988 9999999999999999999985 321111 1
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCC--CcccCCceEEeeccccccccccccchhhhhcCCCh
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSP--PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTP 357 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~--p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~ 357 (625)
....+. .+|+++++ |.+|+. ..+|++++++++. +.+. +...+ .| ..|.|
T Consensus 279 ~e~~gv-~PDivt~g--K~lg~G~~Pigavv~~~~i~--~~~~~~~~~~~-~T----------------------~~gnp 330 (442)
T TIGR03372 279 CEHEGV-QPDILCLA--KALGGGVMPIGATIATEAVF--SVLFDNPFLHT-TT----------------------FGGNP 330 (442)
T ss_pred hhhcCC-CCCeeeeh--hhhcCCcccceEEEecHHHH--HhhhccCcccc-CC----------------------CCCCH
Confidence 111111 57988765 999753 2368888888773 2221 11100 01 12444
Q ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----C-cE-EEeCCCCCCCcceEEEEeccCCCCCCcccc
Q 043646 358 QIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----Q-NI-QVLGNTSVKRQAILSFLVYSTTNSSPENMK 431 (625)
Q Consensus 358 ~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~-gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~ 431 (625)
..++...++++.+ +. +.+.++.+.+.+++++.|+++ | .+ ++-+ ++.++.+.+..+.
T Consensus 331 ~~~Aaa~a~L~~i--~~---~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG-----~Gl~~giel~~~~-------- 392 (442)
T TIGR03372 331 LACAAALATINEL--LE---KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARG-----KGLLMAIEFRDNE-------- 392 (442)
T ss_pred HHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec-----ceEEEEEEeCChH--------
Confidence 4455555666665 22 234556666666666666543 3 22 2222 3455555543211
Q ss_pred ccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHH
Q 043646 432 IERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEF 511 (625)
Q Consensus 432 ~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ 511 (625)
....+.+.|.+ +||.+.... . .+..+||.++..+|++|+|+
T Consensus 393 -------~~~~i~~~l~~-~Gvl~~~~~-~------------------------------~~~~lr~~Ppl~~t~~~id~ 433 (442)
T TIGR03372 393 -------IGYAFAKELFQ-QNILVAGTL-N------------------------------NAKSIRIEPPLTITIEQCAL 433 (442)
T ss_pred -------HHHHHHHHHHH-CCcEEeecC-C------------------------------CCCEEEEECCcccCHHHHHH
Confidence 13467777765 699985310 0 13679999999999999999
Q ss_pred HHHHHHHH
Q 043646 512 ILAALEFI 519 (625)
Q Consensus 512 ll~aL~~~ 519 (625)
++++|++.
T Consensus 434 ~~~~l~~~ 441 (442)
T TIGR03372 434 VIKAAKDA 441 (442)
T ss_pred HHHHHHHh
Confidence 99999875
No 301
>PRK06541 hypothetical protein; Provisional
Probab=99.63 E-value=4.8e-13 Score=146.03 Aligned_cols=373 Identities=13% Similarity=0.060 Sum_probs=203.0
Q ss_pred CCCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC
Q 043646 64 GNDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137 (625)
Q Consensus 64 ~~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~ 137 (625)
+.+..+++..|+ -|+|..+ .|..++.|.+++.+++.... +...+ ....+...++.+++++++..+
T Consensus 41 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~---~~~~~---~~~~~~~~~la~~l~~~~p~~ 111 (460)
T PRK06541 41 GEGCYIWDDRGK---RYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA---FFPLW---SYAHPPAIELAERLAALAPGD 111 (460)
T ss_pred CcccEEEeCCCC---EEEECCccHHhccCCCCCHHHHHHHHHHHhhCc---Ccccc---ccCCHHHHHHHHHHHHhCCCC
Confidence 334556666553 4888633 45677899999999886421 11000 011234455677777776543
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eE
Q 043646 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EV 205 (625)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~v 205 (625)
-+ .+.|+.+|+.+.-..+-.++.... .. =.++...+|.....+|.....++...|. .+
T Consensus 112 ~~-~v~f~~sGseAve~AlklAr~~~~--------~~-g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~ 181 (460)
T PRK06541 112 LN-RVFFTTGGSEAVESAWKLAKQYFK--------LT-GKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGG 181 (460)
T ss_pred cC-EEEEcCCcHHHHHHHHHHHHHHHH--------hc-CCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCc
Confidence 33 799998888874333322221000 00 0122222344445555555433322221 23
Q ss_pred EEEecCCCCC-----CC--------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEE
Q 043646 206 VEIGLDDNGL-----LD--------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (625)
Q Consensus 206 v~v~~~~~~~-----ld--------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~viv 268 (625)
..+|...... -+ ++.+++.+... ..+.+.+|+++.+.++.|.+.+ +++|.++|++||+++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~ 260 (460)
T PRK06541 182 FRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE-GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVS 260 (460)
T ss_pred EEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc-CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3343221100 12 35677777531 1235678888888999999988 99999999999999999
Q ss_pred eccC-cCCCcccc--CCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc---ccCCceEEeeccccccc
Q 043646 269 DFAA-SGPYVKIN--LRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS---TCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 269 D~A~-~~g~~~id--~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~---~~ggg~v~~~~~~~~~~ 341 (625)
|+++ ++|-.... ....+. .+|+++++ |.+++.. .+|++++++++.. .+.+. ...+.+
T Consensus 261 DEV~tGfGR~G~~~a~~~~gv-~PDivt~g--K~l~~G~~pigav~~~~~i~~--~~~~~~~~~~~~~T----------- 324 (460)
T PRK06541 261 DEVICAFGRLGEMFGCERFGY-VPDIITCA--KGITSGYSPLGAMIASDRLFE--PFLDGPTMFLHGYT----------- 324 (460)
T ss_pred echhhCCCcCchhhhhhhcCC-CCCEEEec--ccccCCccceeEEEEcHHHHH--HhhcCCCccccCCC-----------
Confidence 9998 55422211 111111 47888754 9997532 4788899888732 22110 000011
Q ss_pred cccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEecc
Q 043646 342 TLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
..|.|..+++..+.++.+ + .+.+.++.+++.+++.+.|+++....+++.. ...+.++.+.+..
T Consensus 325 -----------~~gnp~~~aaala~l~~l--~---~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~v-rg~Gl~~~ie~~~ 387 (460)
T PRK06541 325 -----------FGGHPVSAAVALANLDIF--E---REGLLDHVRDNEPAFRATLEKLLDLPIVGDV-RGDGYFYGIELVK 387 (460)
T ss_pred -----------CCCCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHHhhcCCCeEEE-EecceEEEEEEec
Confidence 123333333334445544 2 2245567777788888877665221111110 1134555555432
Q ss_pred CCCCCCccccccCC--CCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 422 TTNSSPENMKIERN--KPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 422 ~~~~~~~~~~~~~~--~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
+.... ...... .......+.+.|.+ +||.+.+.. + ....+||+
T Consensus 388 ~~~~~---~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~-~------------------------------g~~~lrl~ 432 (460)
T PRK06541 388 DKATK---ETFTDDESERLLRGFLSPALFE-AGLYCRADD-R------------------------------GDPVVQLA 432 (460)
T ss_pred Ccccc---cCCcchhhhhhHHHHHHHHHHh-CCeEEEecC-C------------------------------CCCEEEEE
Confidence 21000 000000 00011245566655 799987421 0 12679999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 500 FPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
+++.+|++|+|+++++|++++.+.+
T Consensus 433 Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 433 PPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987754
No 302
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=8.6e-13 Score=142.92 Aligned_cols=352 Identities=14% Similarity=0.100 Sum_probs=196.6
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..+. |...+.|.+++.+++.... ..... ....+...++.+++++++.....
T Consensus 31 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~-~~~~~-----~~~~~~~~~la~~l~~~~p~~~~ 101 (421)
T PRK06777 31 NATLWDVEG---REYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT-HTAYQ-----IVPYASYVTLAERINALAPIDGP 101 (421)
T ss_pred cCEEEeCCC---CEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc-ccccc-----ccCChHHHHHHHHHHHhCCCCCC
Confidence 344555545 358886443 5678899999999886431 11110 01122334566777777653222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
+.+.|+.+|+.+.-.++-.++. . .|.+.+|.....+|.....++...|. .+.
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~ 166 (421)
T PRK06777 102 AKTAFFTTGAEAVENAVKIARA--------------Y-TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIF 166 (421)
T ss_pred ceEEEeCCcHHHHHHHHHHHHH--------------h-hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcE
Confidence 3788888888874444433331 1 22222344445555555433332221 112
Q ss_pred EEecCCC--C---CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc-cC---HHHHHHHHHHcCCEEEEeccCcC-CC
Q 043646 207 EIGLDDN--G---LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY-SD---TRSIARLLHQYGGFACFDFAASG-PY 276 (625)
Q Consensus 207 ~v~~~~~--~---~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~-~~---l~~I~~la~~~g~~vivD~A~~~-g~ 276 (625)
.++.... + ..+++.+++.+.+....+++.+|++..+.+..|.. .| +++|.++|++||+++|+|+++.. +.
T Consensus 167 ~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr 246 (421)
T PRK06777 167 HALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFAR 246 (421)
T ss_pred EcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCcc
Confidence 2222211 1 12356677777531123467899999998888965 44 89999999999999999999762 22
Q ss_pred cc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
.. ......+. .+|+++ +.|.+++...+|+++.++++. +.+.+... +.+ ..
T Consensus 247 ~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~i~--~~~~~~~~-~~T----------------------~~ 298 (421)
T PRK06777 247 TGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAEVM--DAPAPGGL-GGT----------------------YA 298 (421)
T ss_pred CCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHHHH--hccCCCCC-CCC----------------------CC
Confidence 11 11111111 468775 459997434489999998873 33322111 001 12
Q ss_pred CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCCCCCCccc
Q 043646 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTTNSSPENM 430 (625)
Q Consensus 355 gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~ 430 (625)
+.|....++.++++.+ +. +.+.++.+++.+++.+.|+++ |.+.-+.+ ++.++.+.+..+..
T Consensus 299 ~~p~~~aaa~a~L~~~--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg----~G~~~~i~~~~~~~------ 363 (421)
T PRK06777 299 GNPLAVAAALAVLDVI--AE---EKLCQRALILGAHLVEVLEKAKASCPAIVDIRA----RGSMVAVEFNDPQT------ 363 (421)
T ss_pred cCHHHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecC----ceEEEEEEEecCcc------
Confidence 3333334444555544 21 356667777777777777653 43333322 34455443322110
Q ss_pred cccCCCCCC--hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 431 KIERNKPLH--GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 431 ~~~~~~~l~--~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
+..-. ...+...+.+ .||.+.++..+ .+++||++++..++++
T Consensus 364 ----~~~~~~~~~~l~~~~~~-~Gv~i~~~~~~-------------------------------g~~lr~~ppl~i~~~~ 407 (421)
T PRK06777 364 ----GKPSPEFTRQYQRQALE-EGLLLLSCGVH-------------------------------GNVIRFLYPLTIPDAQ 407 (421)
T ss_pred ----CCccHHHHHHHHHHHHh-CCeEEeecCCC-------------------------------CCEEEEeCCCCCCHHH
Confidence 00000 1234444444 79998764322 2689999999999999
Q ss_pred HHHHHHHHHHHH
Q 043646 509 FEFILAALEFIA 520 (625)
Q Consensus 509 id~ll~aL~~~~ 520 (625)
+++++++|++++
T Consensus 408 i~~~~~~l~~~l 419 (421)
T PRK06777 408 FSKALNILTRLL 419 (421)
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 303
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1.8e-12 Score=141.02 Aligned_cols=352 Identities=14% Similarity=0.014 Sum_probs=197.3
Q ss_pred ccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+.+..| .-|+|..+ .|..++.|.+++.+++......... ....+...++.+.|++.+...-+
T Consensus 33 ~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~------~~~~~~~~~la~~L~~~~p~~~~- 102 (443)
T PRK08360 33 AKVWDIEG---NEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI------YGFPVEPLLLAEKLIEIAPGDNP- 102 (443)
T ss_pred eEEEECCC---CEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc------ccCcHHHHHHHHHHHHhCCCCCC-
Confidence 44444444 34888543 4566889999999988643111110 01123445677778888764434
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVEI 208 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v 208 (625)
.|.|+.+|+.+.-.++-.++. . .|.+.++......|.....++...|. .+..+
T Consensus 103 ~v~f~~sGsEAve~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~ 167 (443)
T PRK08360 103 KVSFGLSGSDANDGAIKFARA--------------Y-TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYI 167 (443)
T ss_pred EEEEcCCHHHHHHHHHHHHHH--------------h-cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEE
Confidence 799998888874444433331 1 22222333344556554444433221 23334
Q ss_pred ecCCCCC------------CCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccC
Q 043646 209 GLDDNGL------------LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 209 ~~~~~~~------------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~ 272 (625)
|...... -+++.+++.+......+++++|+++...|++|.+.+ +++|.++|++||+++|+|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 247 (443)
T PRK08360 168 PYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQ 247 (443)
T ss_pred eCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 4322100 123456666653112357899999988899999876 789999999999999999997
Q ss_pred c-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchh
Q 043646 273 S-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIE 349 (625)
Q Consensus 273 ~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (625)
. ++.... .....+. .+|++++ .|.+++...+|++++++++. +.+.+...+ .+
T Consensus 248 ~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~i~--~~~~~~~~~-~T------------------- 302 (443)
T PRK08360 248 SGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAEIM--DSLPPLAHA-FT------------------- 302 (443)
T ss_pred cCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHHHH--hhhcCCCCC-CC-------------------
Confidence 6 332221 1111111 4687766 69998433479999888773 333211100 00
Q ss_pred hhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCCCC
Q 043646 350 ERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTTNS 425 (625)
Q Consensus 350 ~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~~~ 425 (625)
..+.|.....+.++++.+. . +.+.++.+.+.+++++.|+++ |.+ +.. ..++.++.+.+..+..
T Consensus 303 ---~~~~p~~~aaa~a~l~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v---~~v-rg~Gl~~gie~~~~~~- 369 (443)
T PRK08360 303 ---LSGNPVASAAALAVIEEIE--E---KNLLKRAEKLGNYTKKRLEEMKKKHELI---GDV-RGIGLMIGVDLVKDRE- 369 (443)
T ss_pred ---CCcCHHHHHHHHHHHHHHH--H---cCHHHHHHHHHHHHHHHHHHHHHhCCCe---eee-eccceEEEEEEecCCc-
Confidence 1123333333345555542 1 234566666666666666543 322 111 1234444444432210
Q ss_pred CCccccccCCCC--CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 043646 426 SPENMKIERNKP--LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY 503 (625)
Q Consensus 426 ~~~~~~~~~~~~--l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~ 503 (625)
...+ -....+...+.+ +||.+... ....+|+++++.
T Consensus 370 --------~~~~~~~~~~~~~~~l~~-~Gi~~~~~---------------------------------~~~~lr~~P~l~ 407 (443)
T PRK08360 370 --------TKERAYEEAAKVVWRAWE-LGLIVTFF---------------------------------SGNVLRIQPPLT 407 (443)
T ss_pred --------ccCccHHHHHHHHHHHHH-CCeEEeec---------------------------------CCCEEEEeCCCC
Confidence 0000 012356666654 79987521 126799999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 043646 504 MSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 504 ~t~edid~ll~aL~~~~~~~ 523 (625)
+|++|++++++++++++...
T Consensus 408 ~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 408 IEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 304
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.62 E-value=5.1e-13 Score=149.32 Aligned_cols=173 Identities=17% Similarity=0.146 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH-HH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-WR 199 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~ 199 (625)
....++++..|+.||++.. ..++ ||||.++..++.+. +.+||. |++....|-|+..+ +.
T Consensus 174 G~i~eAq~~AA~~fgAd~t--yFlv-NGTS~gn~a~i~a~---------------~~~Gd~--VLvdRN~HKSv~hgaLi 233 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKT--YFVL-NGTSASNKVVTNAL---------------LTPGDL--VLFDRNNHKSNHHGALI 233 (720)
T ss_pred hHHHHHHHHHHHHhCCCce--EEEe-CChhHHHHHHHHHh---------------cCCCCE--EEeecccHHHHHHHHHH
Confidence 4678899999999999744 4454 89999888888876 589995 99999999999986 88
Q ss_pred HcCCeEEEEecCC--C---CCCCHH-----HHHHHHHHhhh----CCC-CeEEEEecccCccccccCHHHHHHH-HHHcC
Q 043646 200 QSLAEVVEIGLDD--N---GLLDIE-----ALRSQLELYKA----AKR-PMLGSFSACSNVTGIYSDTRSIARL-LHQYG 263 (625)
Q Consensus 200 ~~G~~vv~v~~~~--~---~~ld~~-----~L~~~l~~~~~----~~~-~~lv~~~~~~n~TG~~~~l~~I~~l-a~~~g 263 (625)
+.|+.++++.... . +.++.+ .++++|.++.. ..+ .++++++++ |..|++.++++|+++ +|.++
T Consensus 234 LsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~ 312 (720)
T PRK13578 234 QAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD 312 (720)
T ss_pred HcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC
Confidence 9999999987653 2 345654 48888875310 113 488888876 578999999999998 68888
Q ss_pred CEEEEeccCcCCC--ccc--cCCCC-CCCCCc----EEEEcCCCCCCCCCCceEEEEeccc
Q 043646 264 GFACFDFAASGPY--VKI--NLRSR-NIDGYD----AIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 264 ~~vivD~A~~~g~--~~i--d~~~~-~~~~~D----~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
+++||+||+.-. .+. ++... ...|+| +++-|.||.+++-...++|.+++..
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~ 372 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH 372 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc
Confidence 999999987422 121 11111 112778 9999999999887777888876654
No 305
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.61 E-value=9.5e-14 Score=147.02 Aligned_cols=322 Identities=12% Similarity=0.070 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH-HHHc
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-WRQS 201 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~ 201 (625)
+.++++.+++++|.+ .+++|.+|+. +++.+. .+. ++|||. | ++.+|.....+ +...
T Consensus 73 ~~~lE~~va~~~G~~---~av~v~sGT~-Al~ll~-~l~--------------l~pGDe--V--psn~~f~Tt~ahIe~~ 129 (450)
T TIGR02618 73 FYHLERTVRELYGFK---YVVPTHQGRG-AENLLS-QIA--------------IKPGDY--V--PGNMYFTTTRYHQEKN 129 (450)
T ss_pred HHHHHHHHHHHHCCC---eEEEcCCHHH-HHHHHH-HhC--------------CCCcCE--E--CCceeHHHHHHHHHhC
Confidence 557889999999986 5788855555 566554 332 689983 4 55666555555 6777
Q ss_pred CCeEEEEecC----------CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc-ccc---cCHHHHHHHHHHcCCEEE
Q 043646 202 LAEVVEIGLD----------DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT-GIY---SDTRSIARLLHQYGGFAC 267 (625)
Q Consensus 202 G~~vv~v~~~----------~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T-G~~---~~l~~I~~la~~~g~~vi 267 (625)
|+.++.++.+ .+|.+|+++|+++|++. ...++++|.+..++|.. |.. .++++|.++|++||+.+|
T Consensus 130 Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~-~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi 208 (450)
T TIGR02618 130 GATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV-GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVF 208 (450)
T ss_pred CeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc-cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEE
Confidence 8866666443 25889999999999842 11245678888888866 787 457999999999999999
Q ss_pred EeccCcCCC-----------ccccCCCC---CCCCCcEEEEcCCCCCCCCCCceEEEEeccc-cc-cCCCCCcccCCceE
Q 043646 268 FDFAASGPY-----------VKINLRSR---NIDGYDAIFLATHKFLGGPGTPGILLISKAL-YQ-LGSSPPSTCGGGTV 331 (625)
Q Consensus 268 vD~A~~~g~-----------~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~-~~-l~~~~p~~~ggg~v 331 (625)
.|+|++++. ...++++. -...+|.+++|.+|-+++|.| |+++.+++- +. .+...+.+ +|..
T Consensus 209 ~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~-eG~~- 285 (450)
T TIGR02618 209 YDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVF-EGMP- 285 (450)
T ss_pred EEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc-CCcc-
Confidence 999988743 11222110 023689999999999999987 888866543 21 11111112 1110
Q ss_pred EeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCC
Q 043646 332 NYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKR 411 (625)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~ 411 (625)
..|..+...+ ++++.-+.+.... ...++....+++|.+.|.+. |+.++.|.
T Consensus 286 ---------------------tyGgla~r~~--~ala~gL~e~~~~-~y~~~r~~~a~~La~~L~~~-Gvpv~~p~---- 336 (450)
T TIGR02618 286 ---------------------SYGGLAGRDM--EAMAIGIREAVDY-EYIEHRVKQVRYLGDKLKAA-GVPIVEPV---- 336 (450)
T ss_pred ---------------------ccCchhhhhH--HHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHC-CCcccCCC----
Confidence 1121111111 2222222232222 33444455688999999887 88886654
Q ss_pred cceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeec-CCCCCchhhHhhhcCChhhHHHHHHHHHhCCCC
Q 043646 412 QAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARG-GCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLG 490 (625)
Q Consensus 412 ~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g 490 (625)
.++..|.-....... ..........++..|-.+.||...- |+. .++.+++.. +-
T Consensus 337 ggh~V~vda~~~lph------~~~~~~p~~al~~~ly~~~gir~~e~g~~--------~~~~~~~~~-----------~~ 391 (450)
T TIGR02618 337 GGHAVFLDARRFLPH------IPQDQFPAQSLAASIYVETGVRSMERGIV--------SAGRNNVTG-----------EH 391 (450)
T ss_pred CcceEEEEhHHhCCC------CChhhChHHHHHHHHHHHhCccEEeecce--------ecccCCCCC-----------cc
Confidence 234444421110000 0111223455666666667775331 221 111110000 00
Q ss_pred CC--CcEEEEecC-CCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 491 VK--PGWTRITFP-YYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 491 ~~--~g~iRis~~-~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
.. -..+|+.++ -.-|.+.+|++.++|..+.++...
T Consensus 392 ~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 392 HRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred cCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhh
Confidence 01 267999996 333789999999999999887644
No 306
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.61 E-value=1.8e-12 Score=140.00 Aligned_cols=348 Identities=16% Similarity=0.084 Sum_probs=194.0
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC--
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG-- 137 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~-- 137 (625)
+..+++..|+ -|+|..+. |..++.|.+++.+++... ...+.. ....+...++.+++++.+..+
T Consensus 26 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~~-----~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 26 GSTLWDEDGK---EYIDFFAGAGALNYGHNNPKLKQALIDYLADD-GIIHSL-----DMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred cCEEEeCCCC---EEEEcccchhhccCCCCCHHHHHHHHHHHhhc-cceecc-----ccCcHHHHHHHHHHHHhccCccC
Confidence 4555555553 48886443 677899999999988532 111110 012344555667777764222
Q ss_pred CCCcEEEe-CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------Ce
Q 043646 138 QADAIIFC-GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AE 204 (625)
Q Consensus 138 ~~~~vift-~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~ 204 (625)
.++.+.|+ .+|+.+.-.++-.++. . +|.+.+|......|.....++...| ..
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 161 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARK--------------V-TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSN 161 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhh--------------h-cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCC
Confidence 12246664 5788874444433331 1 2222234444555555544443222 12
Q ss_pred EEEEecCCCC---CCCHHHHHHHHHHhhhC-CCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CC
Q 043646 205 VVEIGLDDNG---LLDIEALRSQLELYKAA-KRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GP 275 (625)
Q Consensus 205 vv~v~~~~~~---~ld~~~L~~~l~~~~~~-~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g 275 (625)
+..+|..... .-+++.+++.+.++... +++.+|++..+.+..|.+.+ +++|.++|++||+++|+|+++. +|
T Consensus 162 ~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 241 (412)
T TIGR02407 162 VSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCG 241 (412)
T ss_pred eEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 3444432110 12467788888632111 35688999999999998643 7899999999999999999976 32
Q ss_pred Cc----cccCCCCCCCCCcEEEEcCCCCCCC-CCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 276 YV----KINLRSRNIDGYDAIFLATHKFLGG-PGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 276 ~~----~id~~~~~~~~~D~v~~S~hK~lgg-p~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
-. ..+.... .+|+++++ |++++ ...+|+++++++. . ...+... +++
T Consensus 242 RtG~~~a~~~~~v---~PDi~~~~--K~lg~~G~pigav~~~~~~-~--~~~~~~~-~~T-------------------- 292 (412)
T TIGR02407 242 RTGTFFSFEPAGI---EPDIVCLS--KSISGYGLPLALTLIKPEL-D--VWKPGEH-NGT-------------------- 292 (412)
T ss_pred ccchhHHhcccCC---CCCEEEec--hhccCCccceeEEEEchhh-h--ccCCCcc-CCC--------------------
Confidence 21 1122222 67988776 99974 3348999998775 1 1211110 011
Q ss_pred hhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEeccCCCCC
Q 043646 351 RENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVYSTTNSS 426 (625)
Q Consensus 351 ~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~~~~~~~ 426 (625)
..|.|..+....++++.++ + .+.+.++.+.+.+++.++|+. ++.+.. .. ...+.++.+.+.+..
T Consensus 293 --~~gnpl~~aaa~a~l~~~i-~---~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~--~v-rg~Gl~~~l~l~~~~--- 360 (412)
T TIGR02407 293 --FRGNNLAFVTATAALEYYW-S---DDAFEKAVQRKSEIIQERLDRIVAEYPELIK--QV-RGRGLMQGIECGDGD--- 360 (412)
T ss_pred --CCccHHHHHHHHHHHHHHh-c---ccHHHHHHHHHHHHHHHHHHHHHhhCCCceE--ee-ecceeEEEEEecChH---
Confidence 0133333333345566322 2 234555666666666665543 442211 10 112333333332211
Q ss_pred CccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCH
Q 043646 427 PENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSN 506 (625)
Q Consensus 427 ~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ 506 (625)
....+.+.+.+ +||.+.+... .++.+|++++..+|+
T Consensus 361 ------------~~~~~~~~~~~-~Gv~v~~~~~-------------------------------~~~~lr~~p~l~~t~ 396 (412)
T TIGR02407 361 ------------LAGKIAKAAFE-NGLIIETSGP-------------------------------NDEVIKLLPPLTIDE 396 (412)
T ss_pred ------------HHHHHHHHHHH-CCCEEeccCC-------------------------------CCCEEEEECCCCCCH
Confidence 13456777755 7999864210 136799999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 043646 507 EEFEFILAALEFIAAY 522 (625)
Q Consensus 507 edid~ll~aL~~~~~~ 522 (625)
+|+++++++|++++.+
T Consensus 397 ~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 397 ETLQQGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 307
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.61 E-value=2.5e-13 Score=144.27 Aligned_cols=318 Identities=13% Similarity=0.078 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH-HHHc
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS-WRQS 201 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~-~~~~ 201 (625)
+.++++.+++++|.+ .+++|.+|+.+ ++.+ ..++ +++||. | ++.+|.....+ +...
T Consensus 80 ~~~LE~~vAe~lG~e---~aV~v~sGTaA-l~ll-~~l~--------------v~pGd~--V--p~n~~f~Tt~ahI~~~ 136 (460)
T PRK13237 80 FYHLEETVQEYYGFK---HVVPTHQGRGA-ENLL-SRIA--------------IKPGQY--V--PGNMYFTTTRYHQELN 136 (460)
T ss_pred HHHHHHHHHHHHCCC---eEEEeCCHHHH-HHHH-HHhC--------------CCCcCE--E--CCccchHhhHHHHHhC
Confidence 456889999999986 56888566655 5544 3332 678883 3 66666666555 6667
Q ss_pred CCeEEEEec----------CCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc-cccc---CHHHHHHHHHHcCCEEE
Q 043646 202 LAEVVEIGL----------DDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT-GIYS---DTRSIARLLHQYGGFAC 267 (625)
Q Consensus 202 G~~vv~v~~----------~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T-G~~~---~l~~I~~la~~~g~~vi 267 (625)
|+..+-+.. ..+|.+|+++|+++|++. ..+++.++.+..++|.. |... ++++|.++|++||+.||
T Consensus 137 Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~-~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 137 GGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV-GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred CcEEEeeecccccccccCCCCCCCcCHHHHHHHhccc-cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 885544431 126899999999999842 12356677888888888 5664 67999999999999999
Q ss_pred EeccCcCCCc-----------cccCCCC---CCCCCcEEEEcCCCCCCCCCCceEEEEecccc-c-cCCCCCcccCCceE
Q 043646 268 FDFAASGPYV-----------KINLRSR---NIDGYDAIFLATHKFLGGPGTPGILLISKALY-Q-LGSSPPSTCGGGTV 331 (625)
Q Consensus 268 vD~A~~~g~~-----------~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~-~-l~~~~p~~~ggg~v 331 (625)
.|+|++.+.. ...+.+. -....|.+++|+||.+++|.| |+++++++-. + ++.+...+.|.-+
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG~~t- 293 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVYEGMPS- 293 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhccccCCCcC-
Confidence 9999987732 1111100 012579999999999998876 8888876642 1 1111112212111
Q ss_pred EeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCC
Q 043646 332 NYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKR 411 (625)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~ 411 (625)
.|..+.-.+ ++++.-+.+....+.+..+. ...+||.+.|.+. |+.|+.|.
T Consensus 294 ----------------------ygg~~grd~--~alAvgl~E~~~~~y~~~ri-~~~~~l~~~L~~~-Gvpv~~p~---- 343 (460)
T PRK13237 294 ----------------------YGGMAGRDM--EAMAIGIEESVQYEYIEHRV-GQVRYLGEKLLAA-GVPIVEPV---- 343 (460)
T ss_pred ----------------------CCChhhhHH--HHHHhHHHhhchHHHHHHHH-HHHHHHHHHHHHC-CCceecCC----
Confidence 111111111 22222222333333444444 4588999999775 88888764
Q ss_pred cceEEEEe----ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee-cCCCCCchhhHhhhcCChhhHHHHHHHHHh
Q 043646 412 QAILSFLV----YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR-GGCACAGPYGHTLLAFDQTRSLEIRSAIQK 486 (625)
Q Consensus 412 ~~i~~f~~----~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~-~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 486 (625)
+++-.|.- .|.. .........++..|-.+.||... -|.. +++.+.+..
T Consensus 344 ggH~v~vda~~~lph~----------~~~~~p~~al~~~ly~~~GiR~~e~g~~--------~~~~~~~~~--------- 396 (460)
T PRK13237 344 GGHAVFLDARRFLPHL----------PQDQFPAQALAAELYIESGVRSMERGIV--------SAGRDPKTG--------- 396 (460)
T ss_pred CceEEEEEhHHhCCCC----------CcccChHHHHHHHHHHHhCcCeEeecce--------ecccCCCCC---------
Confidence 24444332 1111 11122345566666666777542 1221 111110000
Q ss_pred CCCCCC--CcEEEEecC-CCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 487 GYLGVK--PGWTRITFP-YYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 487 g~~g~~--~g~iRis~~-~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
+-.. -..+|+.++ -.-|.+.+|++.++|..+.++...
T Consensus 397 --~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 397 --ENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred --ccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhh
Confidence 0001 267999996 333789999999999999887644
No 308
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.61 E-value=1.2e-12 Score=142.58 Aligned_cols=366 Identities=11% Similarity=0.030 Sum_probs=198.6
Q ss_pred CCCccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC
Q 043646 64 GNDVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137 (625)
Q Consensus 64 ~~~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~ 137 (625)
+.+..+++..|+ -|+|..+. |...+.|.+++.+++......+... ...+...++.++|++++...
T Consensus 38 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~------~~~~~~~~la~~L~~~~p~~ 108 (445)
T PRK09221 38 AEGMYYTDADGR---KILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQ------MGHPLAFELAERLAELAPGG 108 (445)
T ss_pred ccccEEEeCCCC---EEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccc------cCCHHHHHHHHHHHHhCCCC
Confidence 344566666553 48887443 6678899999998886431111110 11234456777788877533
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------CeE
Q 043646 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AEV 205 (625)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~v 205 (625)
.+ .|.|+.+|+.+.-..+-.++.... . .-+++...+|.....+|.....++...| ..+
T Consensus 109 ~~-~v~f~~sGseAve~AlklAr~~~~-----~----~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~ 178 (445)
T PRK09221 109 LD-HVFFTNSGSESVDTALKIALAYHR-----A----RGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGV 178 (445)
T ss_pred CC-EEEEeCCcHHHHHHHHHHHHHHHH-----h----cCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCC
Confidence 33 799998888873333322221000 0 0011222233444445544333222111 112
Q ss_pred EEEecCC---C---CC-------CCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEE
Q 043646 206 VEIGLDD---N---GL-------LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (625)
Q Consensus 206 v~v~~~~---~---~~-------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~viv 268 (625)
..+|... . +. ..++++++.+... ..+++.+|++..+....|.+.| +++|.++|++||+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~ 257 (445)
T PRK09221 179 DHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH-DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIF 257 (445)
T ss_pred eEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc-CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3333221 0 00 0135677777631 1246789999999999999988 99999999999999999
Q ss_pred eccCc-CCCc--cccCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeecccccccccc
Q 043646 269 DFAAS-GPYV--KINLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY 344 (625)
Q Consensus 269 D~A~~-~g~~--~id~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (625)
|+++. +|-. .......+. .+|+++++ |.+++. ..+|++++++++.. .+.... . ....+
T Consensus 258 DEV~tG~GRtG~~~~~~~~gv-~PDi~~~g--K~l~gG~~Pi~av~~~~~i~~--~~~~~~-~-~~~~~----------- 319 (445)
T PRK09221 258 DEVITGFGRLGAAFAAERFGV-TPDIITFA--KGLTNGAIPMGAVIASDEIYD--AFMQGP-E-YAIEF----------- 319 (445)
T ss_pred eehhhCCCcCchhhHHHhcCC-CCCEEEec--cccccCcccceeeEEcHHHHH--hhccCc-c-ccccc-----------
Confidence 99974 4321 111111211 46888776 888642 12578888888732 221100 0 00000
Q ss_pred ccchhhhhcC-CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCC
Q 043646 345 LEDIEERENG-GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 345 ~~~~~~~~~~-gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
...... |.|..+....+.++.+. . +.+.++.+.+.+++++.|+++.....+.+. ...+-...+.+.+..
T Consensus 320 ----~~~~T~~~~pl~~aaa~a~L~~i~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rg~Gl~~~v~~~~~~ 389 (445)
T PRK09221 320 ----FHGYTYSAHPVACAAGLATLDIYR--E---EDLFERAAELAPYFEDAVHSLKGLPHVIDI-RNIGLVAGIELAPRP 389 (445)
T ss_pred ----ccccCCCcCHHHHHHHHHHHHHHH--h---ccHHHHHHHHHHHHHHHHHhhccCCCEEEE-ecCceEEEEEEeccc
Confidence 000111 22333333344455542 1 245678888888888888765221111111 012222233232211
Q ss_pred CCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 043646 424 NSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY 503 (625)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~ 503 (625)
.+.......+.+.+.+ .||.++.+ ...+|+++++.
T Consensus 390 ----------~~~~~~~~~~~~~~~~-~Gv~~~~~----------------------------------~~~lr~~Ppl~ 424 (445)
T PRK09221 390 ----------GAPGARGYEAFMKCFE-KGLLVRYT----------------------------------GDTIALSPPLI 424 (445)
T ss_pred ----------ccccchHHHHHHHHHH-CCeEEeec----------------------------------CCEEEEECCcc
Confidence 0001123457777755 69998631 25699999999
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 043646 504 MSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 504 ~t~edid~ll~aL~~~~~~ 522 (625)
+|++|+++++++|++++.+
T Consensus 425 ~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 425 IEKAQIDELVDALGDALRA 443 (445)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999998864
No 309
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.61 E-value=1.1e-13 Score=143.01 Aligned_cols=155 Identities=20% Similarity=0.250 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH---
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR--- 199 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~--- 199 (625)
...++..++++-|+.. .++|. ||..+ +..++..+ +++|+. |++...-|......++
T Consensus 79 ~~~le~~iaal~ga~~--~l~fs-SGmaA-~~~al~~L---------------~~~g~~--iV~~~~~Y~gT~~~l~~~~ 137 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAH--ALLFS-SGMAA-ITVALLHL---------------LPAGDH--IVATGDVYGGTLRILRKFL 137 (409)
T ss_pred hHHHHHHHHHHhCCce--EEEec-ccHHH-HHHHHHHh---------------cCCCCc--EEEeCCCcccHHHHHHHHH
Confidence 4557788999999864 35564 77666 44444444 467775 7777666666654443
Q ss_pred -HcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc
Q 043646 200 -QSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK 278 (625)
Q Consensus 200 -~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~ 278 (625)
..|++...+..+ |++.+++++. +++++|.+.+|+||+..+.|+++|.++||++|+++|||.+-+.++ .
T Consensus 138 ~~~gie~~~vd~~-----~~~~~~~~i~-----~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~-~ 206 (409)
T KOG0053|consen 138 PKFGGEGDFVDVD-----DLKKILKAIK-----ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPY-N 206 (409)
T ss_pred HHhCceeeeechh-----hHHHHHHhhc-----cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccc-c
Confidence 468888888765 6788888887 589999999999999999999999999999999999999977763 2
Q ss_pred ccCCCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEe
Q 043646 279 INLRSRNIDGYDAIFLATHKFLGGPGT--PGILLIS 312 (625)
Q Consensus 279 id~~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~ 312 (625)
.+.-++ |+|+++.|..||++|-.. .|.++++
T Consensus 207 ~~pL~l---GADIV~hSaTKyi~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 207 QDPLPL---GADIVVHSATKYIGGHSDVIGGSVVLN 239 (409)
T ss_pred cChhhc---CCCEEEEeeeeeecCCcceeeeEEecC
Confidence 333333 899999999999997654 4666665
No 310
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.61 E-value=1.9e-12 Score=137.35 Aligned_cols=348 Identities=17% Similarity=0.139 Sum_probs=207.9
Q ss_pred ceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH
Q 043646 77 RLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTT 150 (625)
Q Consensus 77 ~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtt 150 (625)
...|||..+ .|-..+.|++++.+++..+. ..++.. ...+...++.+++.+.+..+..+.++|+.+|+.
T Consensus 55 G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~-h~~~~~-----~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGae 128 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN-HTHTRD-----LYYEPYVELAEKLTALAPGSGLKKVFFGNSGAE 128 (447)
T ss_pred CCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhh-cccCCc-----ccchhHHHHHHHHHHhCCcccCCeEEecCCcHH
Confidence 456898766 35568899999999886542 122211 122556667777778777643337888878888
Q ss_pred H---HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC-------------CeEEEEecCCCC
Q 043646 151 A---AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL-------------AEVVEIGLDDNG 214 (625)
Q Consensus 151 a---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G-------------~~vv~v~~~~~~ 214 (625)
+ +|+.. +.. .|...+|-.....|.....++...| ..|..+|.....
T Consensus 129 A~E~AiKiA-r~~-----------------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~y 190 (447)
T COG0160 129 AVEAAIKIA-RAY-----------------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPY 190 (447)
T ss_pred HHHHHHHHH-HHH-----------------hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccc
Confidence 8 33332 222 2222245555566665555544322 136667654311
Q ss_pred ------------CCCHHHHHHHHHHhh-hCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCCc
Q 043646 215 ------------LLDIEALRSQLELYK-AAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYV 277 (625)
Q Consensus 215 ------------~ld~~~L~~~l~~~~-~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~~ 277 (625)
....+.++..+.... ...++.++++..+....|.+.| ++++.++|++||+++|+|++|..-..
T Consensus 191 r~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GR 270 (447)
T COG0160 191 RCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGR 270 (447)
T ss_pred cCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence 112344556554322 2236889999999999999977 78999999999999999999874221
Q ss_pred ---cccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 278 ---KINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 278 ---~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
-+.+...+. .+|+++++ |.+|+...+|.++.++++ .. ..|...++ ...
T Consensus 271 TG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei--~~-~~~g~~~~-----------------------Tf~ 321 (447)
T COG0160 271 TGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEI--MD-WPPGGHGG-----------------------TFG 321 (447)
T ss_pred cccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHh--cc-cCCcccCC-----------------------CCC
Confidence 122222222 57999988 999875558999999988 22 22211111 113
Q ss_pred CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCCCCCcccccc
Q 043646 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIE 433 (625)
Q Consensus 355 gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~ 433 (625)
|.|-.++...+.++.+ + .+.+.++...+.++++++|.++. ...++++. ..++-.+..-+..+....
T Consensus 322 GNpva~Aaa~AvL~vi--e---~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdV-RG~Glm~giE~v~d~~t~------- 388 (447)
T COG0160 322 GNPVACAAALAVLDVI--E---EENLLERAAELGEYLRDRLEELQEKHPLIGDV-RGLGLMIGVELVKDRDTK------- 388 (447)
T ss_pred cCHHHHHHHHHHHHHH--H---HccHHHHHHHHHHHHHHHHHHHHhhcCceecc-cccceEEEEEEecCCCCC-------
Confidence 4444444344555543 2 33677888888888888886641 12234432 112222222232211000
Q ss_pred CCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 043646 434 RNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFIL 513 (625)
Q Consensus 434 ~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll 513 (625)
+...--...++..+.+ .|+.+-+ |+ ...+.+||.++...+++++|.++
T Consensus 389 ~p~~~~~~~i~~~~~~-~Glil~~---~G----------------------------~~~nviRi~PPL~is~e~~d~~l 436 (447)
T COG0160 389 EPDAELAAKIVARAFE-RGLLLLT---CG----------------------------PHGNVLRILPPLTISDEELDEGL 436 (447)
T ss_pred CCCHHHHHHHHHHHHH-cCCEEec---cC----------------------------CCCcEEEEeCCcccCHHHHHHHH
Confidence 0000113466777755 6876642 22 12488999999999999999999
Q ss_pred HHHHHHHHh
Q 043646 514 AALEFIAAY 522 (625)
Q Consensus 514 ~aL~~~~~~ 522 (625)
++|.+++.+
T Consensus 437 ~il~~al~~ 445 (447)
T COG0160 437 DILEEALKE 445 (447)
T ss_pred HHHHHHHHh
Confidence 999998765
No 311
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.60 E-value=5.9e-13 Score=140.45 Aligned_cols=249 Identities=20% Similarity=0.191 Sum_probs=146.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN 194 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~ 194 (625)
.+.+..+..-+....|+++.|.+....-+. .|++|.-..+..+... ....+..|+++..-|+.+
T Consensus 104 isQG~Lq~lfe~Qs~i~eLTGmdvaNaSly--d~atA~aEa~~ma~r~--------------~~~~~~~vlv~~~~hP~~ 167 (429)
T PF02347_consen 104 ISQGRLQALFEYQSMICELTGMDVANASLY--DGATAAAEAMLMAVRA--------------TKRKRNKVLVPESLHPQT 167 (429)
T ss_dssp GBHHHHHHHHHHHHHHHHHHTSSEE-SEBS--SCCHHHHHHHHHHHHH--------------HTT---EEEEETTS-CHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCCCCC--ChhHHHHHHHHHHHHh--------------cccCCcEEEEcCCcChhh
Confidence 466778888899999999999974312223 3555533333333211 112222599999999999
Q ss_pred HHHHHH----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 195 LLSWRQ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 195 ~~~~~~----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
...++. .|.+++.++.++++..| . +++..|++.+|+ ..|.+.++++|++++|++|+++++ +
T Consensus 168 ~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~-----~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ 232 (429)
T PF02347_consen 168 RAVLRTYAAPLGIEIVEVPLDEDGTTD--------D-----DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-G 232 (429)
T ss_dssp HHHHHHHCCHCCEEEEEE-BBTTCSB---------S-----TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-C
T ss_pred HHHHHHhhhhCCeEEEEecccccCCcc--------c-----cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-e
Confidence 876654 58899999988877766 2 689999999885 679999999999999999999987 6
Q ss_pred cCc--CCCccccCCCCCCCCCcEEEEcCCCCCCCCC-----CceEEEEeccccccCCCCCcccCCceEEeeccccccccc
Q 043646 271 AAS--GPYVKINLRSRNIDGYDAIFLATHKFLGGPG-----TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 271 A~~--~g~~~id~~~~~~~~~D~v~~S~hK~lggp~-----g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~ 343 (625)
+.- .+... ...++ |+|+++.+ ||.||.|. +.|++.+++++ .+.++....| -+.+...........
T Consensus 233 ad~~aL~~l~-~Pge~---GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l--~r~lPGRiVG-~t~D~~G~~~~~ltL 304 (429)
T PF02347_consen 233 ADPNALGGLK-SPGEY---GADIVVGE-HQTFGIPMGFGGPGAGFFAVREDL--VRQLPGRIVG-QTKDADGKRAFVLTL 304 (429)
T ss_dssp GGCCGCCTC---GGGG---T-SEEEEC-CTTTT---CCC-S--EEEEE-GGG--GGGS-S-EEE-EEEBCCCSCCEEEE-
T ss_pred cCHHHHhCcC-Chhhc---CccEEeeC-CCCCcccCCCCCCCeeeEEEhhhh--hhhCCCceec-ccccccccceeeecc
Confidence 632 22111 11222 89999655 77775552 27999999998 4455443332 111110000011122
Q ss_pred cccchhhhhcCCChhHHH-----HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEE
Q 043646 344 YLEDIEERENGGTPQIVQ-----MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQ 402 (625)
Q Consensus 344 ~~~~~~~~~~~gt~~~~~-----~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~ 402 (625)
+-+..+-|.+..|.|++. .+.+++-.......|+..+.++...++.|+.++|.++.++.
T Consensus 305 qtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~ 368 (429)
T PF02347_consen 305 QTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP 368 (429)
T ss_dssp GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC
T ss_pred ccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 233334556666766641 12233323334667889999999999999999999874443
No 312
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.60 E-value=1.2e-12 Score=142.32 Aligned_cols=364 Identities=12% Similarity=0.028 Sum_probs=198.9
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..+. |...+.|.+++.+++......+... ...+...++.++|++++...-+
T Consensus 37 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~------~~~~~~~~la~~l~~~~p~~~~ 107 (442)
T PRK13360 37 GMYYTTHDG---RRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQ------MGHPKAFELANRIAEIAPGGLN 107 (442)
T ss_pred eeEEEeCCC---CEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCC------cCCHHHHHHHHHHHHhCCCCCC
Confidence 455666555 348997544 6778999999998886431111110 0123345677778887743333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcC------------CeEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSL------------AEVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G------------~~vv 206 (625)
.|.|+.+|+++.-.++-.++.... .-..+.+..|+. ....|.....++...| ..+.
T Consensus 108 -~v~f~~sGseA~e~AlklAr~~~~----------~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~ 176 (442)
T PRK13360 108 -HVFFTNSGSESVDTALKIALAYHR----------ARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVD 176 (442)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHHH----------hcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCE
Confidence 799998888873333322221000 001111223544 4445554433322111 1233
Q ss_pred EEecCCC---CCC----------CHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEe
Q 043646 207 EIGLDDN---GLL----------DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFD 269 (625)
Q Consensus 207 ~v~~~~~---~~l----------d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD 269 (625)
.+|.... ..+ .+++|++++... ..+++.+|++..+....|.+.| +++|.++|++||+++|+|
T Consensus 177 ~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~-~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~D 255 (442)
T PRK13360 177 HLPHTLDLARNAFSKGQPEHGAELADELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFD 255 (442)
T ss_pred EeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc-CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 3443211 000 245777777631 1246789999999999999988 999999999999999999
Q ss_pred ccC-cCCCcc--ccCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccc
Q 043646 270 FAA-SGPYVK--INLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYL 345 (625)
Q Consensus 270 ~A~-~~g~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (625)
+++ ++|-.. .-....+. .+|+++++ |.+++. ..+|.+++++++.+ .+......+.. ++
T Consensus 256 Ev~tG~GrtG~~~a~~~~gv-~PDivt~g--K~l~gG~~P~gav~~~~~i~~--~~~~~~~~~~~-------------~~ 317 (442)
T PRK13360 256 EVITGFGRLGAPFAAQYFGV-TPDLLTCA--KGLTNGAIPMGAVFVSSEIHD--AFMQGPEAGIE-------------FF 317 (442)
T ss_pred chhhCCCCCccchhhhhcCC-CCceeeee--eccccCccceEEEEEcHHHHH--HhhcCCccccc-------------cc
Confidence 998 444321 11111111 56888765 999642 22677888888732 21110000000 00
Q ss_pred cchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCC
Q 043646 346 EDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNS 425 (625)
Q Consensus 346 ~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~ 425 (625)
...-..|.|..++.+.++++.+ +.. .+.++.+++.+++++.|.++.....+.+. ...+....+.+.+...
T Consensus 318 ---~~~T~~g~pl~~aaa~a~L~~l--~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~~~~l~~~~~- 387 (442)
T PRK13360 318 ---HGYTYSGHPLACAAALATLDLY--ERE---GLLTRAARLAPYWEDALHSLRDAPHVIDI-RNLGLVGAVELAPRDG- 387 (442)
T ss_pred ---cCCCCCCCHHHHHHHHHHHHHH--HhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeee-eccceEEEEEEecCCC-
Confidence 0000123344444445566655 222 35567777777787777654211111111 0112222333322110
Q ss_pred CCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCC
Q 043646 426 SPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMS 505 (625)
Q Consensus 426 ~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t 505 (625)
+..-....+...|.+ +||.++.+ ...+||++++.+|
T Consensus 388 ---------~~~~~~~~~~~~l~~-~Gvl~~~~----------------------------------~~~lr~~Ppl~~t 423 (442)
T PRK13360 388 ---------KPGKRAYEVFLKCFE-KGLMIRYT----------------------------------GDILALSPPLIIE 423 (442)
T ss_pred ---------CcchhHHHHHHHHHH-CCcEEEec----------------------------------CCEEEEeCCCccC
Confidence 000113456666655 69988631 2569999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043646 506 NEEFEFILAALEFIAAY 522 (625)
Q Consensus 506 ~edid~ll~aL~~~~~~ 522 (625)
++|||+++++|++++.+
T Consensus 424 ~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 424 EAQIDELFDILAQALKE 440 (442)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 313
>PLN00144 acetylornithine transaminase
Probab=99.59 E-value=2.3e-12 Score=137.87 Aligned_cols=336 Identities=17% Similarity=0.113 Sum_probs=189.7
Q ss_pred ccccCCCCCCceEeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+.+..|+ -|+|.. ..|...+.|.+++.+++.... ..+.. ...+...++.+.|++..+. +
T Consensus 7 ~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~------~~~~~~~~la~~l~~~~~~---~ 73 (382)
T PLN00144 7 CKLYDVEGK---EYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLA-HVSNV------YHTIPQVELAKRLVASSFA---D 73 (382)
T ss_pred cEEEeCCCC---EEEECCcCHHhccCCCCCHHHHHHHHHHHHhcC-Ccccc------ccCHHHHHHHHHHHhcCCC---C
Confidence 445555453 488853 345568899999999886431 11110 0123345566667766542 3
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCC-C----ceEEEE-cCCCCchhHHHHHHcCC-----------
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDE-E----RWVVFL-GPYEHHSNLLSWRQSLA----------- 203 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~g-d----~~~Vlv-~~~~h~s~~~~~~~~G~----------- 203 (625)
.|.|+.+|+++.-..+-.++.... +. ....+ + +..|+. ....|.....++...+-
T Consensus 74 ~v~f~~sGseA~e~AlklAr~~~~----~~----~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 145 (382)
T PLN00144 74 RVFFCNSGTEANEAAIKFARKYQR----VR----APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLM 145 (382)
T ss_pred eEEEeCCcHHHHHHHHHHHHHHHh----cc----CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCC
Confidence 899998899874433333321100 00 00010 0 223444 44555555444432221
Q ss_pred -eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCc
Q 043646 204 -EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYV 277 (625)
Q Consensus 204 -~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~ 277 (625)
.+..+|. -|+++|++.+.. +++++|+++..+|+.|...+ +++|.++|++||+++|+|+++.. +..
T Consensus 146 ~~~~~~~~-----~d~~~l~~~~~~----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~ 216 (382)
T PLN00144 146 PGVTFVEY-----GNLEAARKLIQK----GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRT 216 (382)
T ss_pred CCeEEeCC-----CCHHHHHHhcCC----CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 1233332 278999988852 46888899888899666532 78999999999999999999763 222
Q ss_pred c--c--cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc
Q 043646 278 K--I--NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN 353 (625)
Q Consensus 278 ~--i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~ 353 (625)
. . +.... .+|++++| |.+++...+|++++++++. +.+.+...+ .+ .
T Consensus 217 g~~~~~~~~~~---~PDi~t~s--K~l~~G~pig~v~~~~~~~--~~~~~~~~~-~T----------------------~ 266 (382)
T PLN00144 217 GYLWAHEAYGV---EPDIMTLA--KPLAGGLPIGAVLVTEKVA--SAINPGDHG-ST----------------------F 266 (382)
T ss_pred chHhhhhhcCC---CCCEEEec--ccccCCcceEEEEEcHHHH--hccCCCCCC-CC----------------------C
Confidence 1 1 12222 56866554 9997545589999998873 333221100 00 1
Q ss_pred CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh----hCCCCcE-EEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 354 GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGR----ILPNQNI-QVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 354 ~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~----L~~l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
.+.|....++.+.++++ +. +.+.++.+.+.+++.+. +.+.|.+ .+-+ .+.++.+.+ ..
T Consensus 267 ~~~pl~~aaa~a~l~~i--~~---~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-----~G~~~~l~l-~~------ 329 (382)
T PLN00144 267 AGGPLVCNAALAVLDKI--SK---PGFLASVAKKGEYLRELLRRKLGGNPHVKEVRG-----VGLLVGIQL-DV------ 329 (382)
T ss_pred CCCHHHHHHHHHHHHHH--hh---chHHHHHHHHHHHHHHHHHHHHhhCCCceeeec-----CceEEEEEe-cC------
Confidence 23333344445556665 22 23344444444444444 4444432 2222 223333333 21
Q ss_pred cccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 429 NMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 429 ~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
....+...+.+ +||.+.++. ....+|++++...+++|
T Consensus 330 ----------~~~~~~~~~~~-~Gv~i~~~~--------------------------------~~~~lrl~p~~~~~~~~ 366 (382)
T PLN00144 330 ----------PAGPLVDACRD-SGLLVLTAG--------------------------------KGDVVRLVPPLVISEAE 366 (382)
T ss_pred ----------ccHHHHHHHHH-CCeEEeecC--------------------------------CCCEEEEeCCCccCHHH
Confidence 13467777754 799987541 12679999998889999
Q ss_pred HHHHHHHHHHHHHh
Q 043646 509 FEFILAALEFIAAY 522 (625)
Q Consensus 509 id~ll~aL~~~~~~ 522 (625)
++.+++.|++++..
T Consensus 367 i~~~~~~l~~~l~~ 380 (382)
T PLN00144 367 LEQAVEILADCLPA 380 (382)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 314
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.59 E-value=4.6e-12 Score=137.41 Aligned_cols=355 Identities=15% Similarity=0.071 Sum_probs=193.3
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ -|+|..+. |...+.|.+++.+++.... ..+.. ....+...++.++|++++.....
T Consensus 24 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~-~~~~~-----~~~~~~~~~la~~l~~~~p~~~~ 94 (420)
T TIGR00700 24 GAILEDVDGN---RLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFT-HTCFM-----VTPYEGYVALAEKLNRIAPGSGP 94 (420)
T ss_pred eeEEEeCCCC---EEEECccCHHhccCCCCCHHHHHHHHHHHHhcc-Ccccc-----ccCChHHHHHHHHHHHhCCCCCC
Confidence 4455555553 48886443 5667899999999885431 11110 01123344566777777753222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC--------C-----eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL--------A-----EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G--------~-----~vv 206 (625)
+.+.|+.+|+++.-.++-.++. . .|.+.+|......|.....++...| . .+.
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARS--------------Y-TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVY 159 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHH--------------h-cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcE
Confidence 3789998888874443333321 1 2222234445556655544443222 1 223
Q ss_pred EEecCCCCC-------C----CHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEecc
Q 043646 207 EIGLDDNGL-------L----DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 207 ~v~~~~~~~-------l----d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A 271 (625)
.++...... . +++.+++.+......+++.+|++..+...+|.+.+ +++|.++|++||+++|+|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV 239 (420)
T TIGR00700 160 RAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEV 239 (420)
T ss_pred EeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 333321000 0 24566666642122357889999999999999877 88999999999999999999
Q ss_pred CcC-CCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccch
Q 043646 272 ASG-PYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDI 348 (625)
Q Consensus 272 ~~~-g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~ 348 (625)
+.. +... ......+. .+|++++ .|.+++...+|++++++++ .+.+.+... +.+
T Consensus 240 ~tg~gr~g~~~a~~~~~~-~pDi~~l--sK~l~~G~pig~v~~~~~i--~~~~~~~~~-~~T------------------ 295 (420)
T TIGR00700 240 QTGFARTGAMFACEHEGP-EPDLITT--AKSLADGLPLSGVTGRAEI--MDAPAPGGL-GGT------------------ 295 (420)
T ss_pred ccCCcccchhHHHhhcCC-CCCEEEe--eccccCCcceEEEEecHHH--HhhcCCCCc-CCC------------------
Confidence 653 2221 11111111 5687765 5999744458999999887 333322110 011
Q ss_pred hhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC----CCCcEEEeCCCCCCCcceEEEEeccCCC
Q 043646 349 EERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL----PNQNIQVLGNTSVKRQAILSFLVYSTTN 424 (625)
Q Consensus 349 ~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~----~l~gv~v~~~~~~~~~~i~~f~~~~~~~ 424 (625)
..+.|....++.++++++ +.. .+.++...+.+++.+.|. .+|.+..+.+ .+.++.+.......
T Consensus 296 ----~~~~pl~~aaa~a~l~~l--~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg----~G~~~~i~~~~~~~ 362 (420)
T TIGR00700 296 ----YAGNPLACAAALAVLAII--ESE---GLIERARQIGRLVTDRLTTLKAVDPRIGDVRG----LGAMIAVELVDPGT 362 (420)
T ss_pred ----CCcCHHHHHHHHHHHHHH--Hhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEeec----cceEEEEEEecCCC
Confidence 112333333334455554 222 233444444444444443 3444433322 33444443322110
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
.. ........+.+.+. ++||.+.++..+ .+++||+++...
T Consensus 363 ~~--------~~~~~~~~l~~~~~-~~Gv~i~p~~~f-------------------------------~~~lRl~p~l~~ 402 (420)
T TIGR00700 363 TE--------PDAGLAERIATAAH-AAGLLLLTCGMF-------------------------------GNIIRFLPPLTI 402 (420)
T ss_pred CC--------ccHHHHHHHHHHHH-HCCeEEeccCCC-------------------------------CCEEEEECCCCc
Confidence 00 00001234454453 479999865322 268999998878
Q ss_pred CHHHHHHHHHHHHHHHH
Q 043646 505 SNEEFEFILAALEFIAA 521 (625)
Q Consensus 505 t~edid~ll~aL~~~~~ 521 (625)
+++++++++++|.+++.
T Consensus 403 ~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 403 GDELLSEGLDILCAILA 419 (420)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999998763
No 315
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.59 E-value=1.5e-12 Score=140.87 Aligned_cols=352 Identities=14% Similarity=0.087 Sum_probs=198.3
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..++ |...+.|.+++.+++.+.. ..... ....+...++.+.+++.+...-+
T Consensus 35 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~-----~~~~~~~~~lae~L~~~~p~~~~ 105 (429)
T PRK06173 35 GVMITLKDG---RRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMS-HIMFG-----GFTHEPAVELAQKLLEILPPSLN 105 (429)
T ss_pred eeEEEcCCC---CEEEEccchHHhccCCCCCHHHHHHHHHHHHhcC-Ccccc-----ccCCHHHHHHHHHHHhhCCCCcC
Confidence 344555545 348886543 5677899999999886431 11110 11233445677778777753333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC-------------CeEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL-------------AEVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G-------------~~vv 206 (625)
.|.|+.+|+++.-.++-.++... +. .-+++...+|......|.....++...| ..+.
T Consensus 106 -~v~f~~sGseAve~AlklAr~~~-----~~----~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~ 175 (429)
T PRK06173 106 -KIFFADSGSVAVEVAMKMALQYQ-----QA----KGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQY 175 (429)
T ss_pred -EEEEeCCchHHHHHHHHHHHHHH-----HH----hCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCe
Confidence 89999888887333322222100 00 0013333234444445554333322111 0122
Q ss_pred EEecCCC------CCCCHHHHHHHHHHhhhCCCCeEEEEecc-cCccccccC----HHHHHHHHHHcCCEEEEeccCcCC
Q 043646 207 EIGLDDN------GLLDIEALRSQLELYKAAKRPMLGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 207 ~v~~~~~------~~ld~~~L~~~l~~~~~~~~~~lv~~~~~-~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g 275 (625)
.+|.... ..-+++.|++.+.. ..+++.+|++... ....|.+.| +++|.++|++||+++|+|++|. |
T Consensus 176 ~~~~p~~~~~~~~~~~~l~~l~~~i~~--~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-G 252 (429)
T PRK06173 176 FLPQPSIKFGEEWNDEAIEPLQDLLEQ--KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIAT-G 252 (429)
T ss_pred EeCCCCcccchhHHHHHHHHHHHHHHh--CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhc-C
Confidence 3332110 01146667777763 2346789999885 777788754 7899999999999999999984 3
Q ss_pred Ccccc----CCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc----ccCCceEEeecccccccccccc
Q 043646 276 YVKIN----LRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS----TCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 276 ~~~id----~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~----~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
.-... ....+. .+|++++ .|.++|.. .+|.+++++++.+ .+.+. +..+.|
T Consensus 253 ~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~p~~a~~~~~~i~~--~~~~~~~~~~~~~~T---------------- 311 (429)
T PRK06173 253 FGRTGKLFALEHAGV-VPDIMCI--GKALTGGYLTLSATITTEAIAQ--TICSGEAKCFMHGPT---------------- 311 (429)
T ss_pred CCcCCcchHHHhcCC-CCCEEEe--ehhhhCCccccceEEecHHHHH--HHhcCCCCccccCCC----------------
Confidence 21111 111111 5788885 59986542 3678888887632 22110 000000
Q ss_pred chhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCC
Q 043646 347 DIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSS 426 (625)
Q Consensus 347 ~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~ 426 (625)
..|.|..++.+.++++++..+ .+.++.+++.+++.+.|+++.+...++.. ..++.++.+.+....
T Consensus 312 ------~~g~p~~~aaa~a~l~~i~~~-----~~~~~~~~~g~~l~~~L~~~~~~~~v~~v-Rg~Gl~~~iel~~~~--- 376 (429)
T PRK06173 312 ------FMANPLACAIAAESIRLLLES-----PWQQNIQRIEAQLKQELAPAAEFDSVAEV-RVLGAIGVVEMKEPV--- 376 (429)
T ss_pred ------CCcCHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHhhcCCCeeee-eccceEEEEEeCCcc---
Confidence 123444455555666665322 34566677777777777643221111111 124556666553221
Q ss_pred CccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCH
Q 043646 427 PENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSN 506 (625)
Q Consensus 427 ~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ 506 (625)
....+.+.|.+ .||.+++. ...+||.+++..|+
T Consensus 377 ------------~~~~i~~~l~e-~Gi~v~~~----------------------------------g~~l~~~Ppl~it~ 409 (429)
T PRK06173 377 ------------NMATLQPRFVE-HGIWVRPF----------------------------------GKLVYIMPPFIISP 409 (429)
T ss_pred ------------cHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEeCCccCCH
Confidence 23467787855 69998631 15799999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 043646 507 EEFEFILAALEFIAAY 522 (625)
Q Consensus 507 edid~ll~aL~~~~~~ 522 (625)
+|+++++++|++++..
T Consensus 410 ~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 410 DELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998865
No 316
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=9.6e-12 Score=135.49 Aligned_cols=356 Identities=15% Similarity=0.068 Sum_probs=198.3
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ -|+|..+ .|...+.|.+++.+++...... +.. ....+...++.++|++++.....
T Consensus 33 G~~l~D~dG~---~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~-~~~-----~~~~~~~~~lae~L~~~~p~~~~ 103 (445)
T PRK08593 33 GATLTDVDGK---TYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHY-TPA-----YMYHEPLVRLAKKLCELAPGDFE 103 (445)
T ss_pred eCEEEeCCCC---EEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCc-ccc-----ccCCHHHHHHHHHHHHhCCCCCC
Confidence 3445444453 4888633 4556789999999888542111 100 01234456677888888754322
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
+.|.|+.+|+.+.-..+-.++. . .|.+.+|.....+|.....++...+. .++
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~--------------~-tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~ 168 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARA--------------Y-TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFV 168 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHH--------------h-hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcE
Confidence 3799998888885554433331 1 22222344455566665544433221 233
Q ss_pred EEecCCC-----CCCCH-------HHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 207 EIGLDDN-----GLLDI-------EALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 207 ~v~~~~~-----~~ld~-------~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
.+|.... +..+. +++++.+.+....+++.+|++..+.+..|.+.| +++|.++|++||+++|+|+
T Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DE 248 (445)
T PRK08593 169 HIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDD 248 (445)
T ss_pred EeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 4443221 11112 334444432111246889999999999999877 8999999999999999999
Q ss_pred cCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 271 AAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 271 A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
++. +|.... .....+. .+|+++++ |.+++...+|++++++++. +.+.+...+ .+
T Consensus 249 v~tg~GrtG~~~a~~~~gv-~pDi~t~g--K~l~~G~p~gav~~~~~i~--~~~~~~~~~-~T----------------- 305 (445)
T PRK08593 249 IQQGLGRTGKWSSISHFNI-TPDLMSFG--KSLAGGMPMSAIVGRKEIM--ESLEAPAHL-FT----------------- 305 (445)
T ss_pred hhhCCCcCchHHHHHhcCC-CCCEeeec--ccccCCcccEEEEEcHHHH--hhhccCCCC-CC-----------------
Confidence 974 432211 0111111 46877665 9887533478999998873 222111000 00
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEeccCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
..+.|..++...++++.+ +. +.+.++.+.+.+++.+.|.+ .|.+.-+. ..+..+.+.+..+.
T Consensus 306 -----~~~~pl~~aaa~a~l~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr----G~Gl~~gi~l~~~~ 371 (445)
T PRK08593 306 -----TGANPVSCAAALATIDMI--ED---ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVR----GYGLSIGIDIVSDK 371 (445)
T ss_pred -----CCCCHHHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEe----ccceEEEEEEecCC
Confidence 123333333344555555 21 24556666666777776654 33221111 12333343332211
Q ss_pred CCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 043646 424 NSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY 503 (625)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~ 503 (625)
... .........+...+.+ +||.+.+. ....+|+++++.
T Consensus 372 ~~~-------~~~~~~~~~~~~~~~~-~Gv~~~~~---------------------------------~~~~lr~~p~l~ 410 (445)
T PRK08593 372 KLK-------TRDNEAALKICNYCFE-HGVVIIAV---------------------------------AGNVLRFQPPLV 410 (445)
T ss_pred CcC-------CCcHHHHHHHHHHHHH-CCeEEecc---------------------------------CCCEEEEECCCc
Confidence 000 0000012356666655 79988531 126799999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 043646 504 MSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 504 ~t~edid~ll~aL~~~~~~~ 523 (625)
+|++|++++++++++++.+.
T Consensus 411 ~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 411 ITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 317
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.58 E-value=6.8e-13 Score=135.59 Aligned_cols=323 Identities=14% Similarity=0.133 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCC--CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH
Q 043646 118 RMTKMVHEASNYIKRCLGGGQA--DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL 195 (625)
Q Consensus 118 ~~~~~~~~~~~~ia~~~g~~~~--~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~ 195 (625)
+..++...+++.....++.+.. ..+++| +|.+.++..+.+.+ +++|| .|++..+++++.+
T Consensus 101 G~peLl~fik~h~~~~ih~p~~~~wdiiit-~G~t~~l~~~l~~~---------------~N~gd--~vlie~~ty~~AL 162 (472)
T KOG0634|consen 101 GIPELLLFIKDHNRPTIHAPPYKNWDIIIT-NGNTDGLFKVLRTL---------------INRGD--HVLIEEYTYPSAL 162 (472)
T ss_pred CcHHHHHHHHHhccccccCCCCCCceEEEe-cCCchHHHHHHHHh---------------hcCCC--ceEEecccchHHH
Confidence 3445444444433323333322 268888 78888888888877 57888 4999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhC----CCCe-EEEEecccCccccccCH---HHHHHHHHHcCCEEE
Q 043646 196 LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAA----KRPM-LGSFSACSNVTGIYSDT---RSIARLLHQYGGFAC 267 (625)
Q Consensus 196 ~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~----~~~~-lv~~~~~~n~TG~~~~l---~~I~~la~~~g~~vi 267 (625)
.+++..|++++.|+.|.+| ++++.|++.+...+.. ++++ +..+...+||||...++ ++|.++|++|+++++
T Consensus 163 ~s~~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIV 241 (472)
T KOG0634|consen 163 QSMEALGVKIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIV 241 (472)
T ss_pred HhccccCceEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEE
Confidence 9999999999888887765 6899999999753322 3454 77889999999999886 579999999999999
Q ss_pred EeccCcCCCcc-------c----------------cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCC
Q 043646 268 FDFAASGPYVK-------I----------------NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPP 323 (625)
Q Consensus 268 vD~A~~~g~~~-------i----------------d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p 323 (625)
.|+.+..-... . ++-.++.+|--+-.-|++|.++ |+ .+|++.+++.+ + ++
T Consensus 242 eDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~--l---~r 315 (472)
T KOG0634|consen 242 EDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLF--L---KR 315 (472)
T ss_pred ecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHH--H---HH
Confidence 99985532211 0 0011111222223348999997 55 59999998866 2 22
Q ss_pred cccCCceEEeeccccccccccccchhhhhcCCChhHHHH-HHHHHHHHHHhhcCH----HHHHHHHHHHHHHHHHhhCC-
Q 043646 324 STCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM-IRAALAFWVKEYIGY----EVIKKQEDVYIESALGRILP- 397 (625)
Q Consensus 324 ~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~-~~aal~~~~~~~~g~----~~i~~~~~~l~~~l~~~L~~- 397 (625)
....++.. ..+...+.+. +.+.+..|. +.|. ..++......+..+...|.+
T Consensus 316 il~~ae~~---------------------t~~pSg~sq~iv~a~l~~wg--qeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky 372 (472)
T KOG0634|consen 316 ILDLAEVA---------------------TSGPSGFSQGIVYAMLKRWG--QEGFLRWIQHLRSSYTERRNALLSALDKY 372 (472)
T ss_pred Hhhhccee---------------------ecCcccccHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222210 0111112222 233344442 2221 12222222234444444433
Q ss_pred CCc--EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC-hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCCh
Q 043646 398 NQN--IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH-GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474 (625)
Q Consensus 398 l~g--v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~-~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~ 474 (625)
+|. +++..| .++.+.+.-.+-...+ ....++ -.++....+.++||.+..|..+.+....
T Consensus 373 lp~~~~~~~~P----~aGmFiwv~i~~~~~~-------~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~------- 434 (472)
T KOG0634|consen 373 LPKSVCEYHPP----KAGMFIWVEIPYINFD-------TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPES------- 434 (472)
T ss_pred CCCCeeEEecC----CcceEEEEEecccccc-------cccchHHHHHHHHHHHHHCCeEEecCceeEEcCcc-------
Confidence 343 455555 4577666655411000 112233 3455555556799999999887632111
Q ss_pred hhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 475 ~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+ .+-++|+++.+. ..++++..++.+..++.+
T Consensus 435 --------------s~-~kiffRls~a~a-~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 435 --------------SW-SKIFFRLSIAFA-EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred --------------CC-CcceEEEEeecC-CHHHHHHHHHHHHHHHHH
Confidence 00 124899999754 567888877777776655
No 318
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.58 E-value=5.8e-12 Score=136.45 Aligned_cols=355 Identities=14% Similarity=0.120 Sum_probs=196.2
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..|+ -|+|..+. |...+.|.+++.+++... ...+.. ....+...++.+.+++++.....
T Consensus 31 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~~-----~~~~~~~~~la~~l~~~~p~~~~ 101 (421)
T PRK09792 31 NATLKDVEGN---EYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQF-THTAYQ-----IVPYESYVTLAEKINALAPVSGQ 101 (421)
T ss_pred ccEEEeCCCC---EEEEccCchhhhcCCCCCHHHHHHHHHHHHhc-cCcccC-----ccCCHHHHHHHHHHHHhCCCCCC
Confidence 3455555553 48887443 567889999999888542 111110 01123344566777777653222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
+.+.|+.||+.+.-.++-.++. . .|...+|......|.....++...|. .+.
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~ 166 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARA--------------H-TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVY 166 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHH--------------h-cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcE
Confidence 3788888888874444433331 1 22222344444555554433332221 133
Q ss_pred EEecCC--CCC---CCHHHHHHHHHHhhhCCCCeEEEEecccCcccccc-C---HHHHHHHHHHcCCEEEEeccCcC-CC
Q 043646 207 EIGLDD--NGL---LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS-D---TRSIARLLHQYGGFACFDFAASG-PY 276 (625)
Q Consensus 207 ~v~~~~--~~~---ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~-~---l~~I~~la~~~g~~vivD~A~~~-g~ 276 (625)
.+|... ++. -+++.+++.+.+....+++.+|+++.+++++|... | +++|.++|++||+++|+|+++.. +.
T Consensus 167 ~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr 246 (421)
T PRK09792 167 HVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFAR 246 (421)
T ss_pred EcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC
Confidence 344322 111 13467777776311124688999999999999875 5 88999999999999999999663 22
Q ss_pred cc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
.. .....++ ..+|++++ .|.+++...+|++++++++. +.+.+... +.+ ..
T Consensus 247 ~G~~~a~~~~~-~~pDi~t~--gK~l~~G~pigav~~~~~i~--~~~~~~~~-~~T----------------------~~ 298 (421)
T PRK09792 247 TGKLFAMDHYA-DKPDLMTM--AKSLAGGMPLSGVVGNANIM--DAPAPGGL-GGT----------------------YA 298 (421)
T ss_pred CCchhHHHhcC-CCCcEEEe--ehhhcCCCceEEEEEcHHHH--hccCCCCc-CCC----------------------CC
Confidence 21 1111111 25787655 59997545589999988873 23221110 011 12
Q ss_pred CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEeccCCCCCCccc
Q 043646 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVYSTTNSSPENM 430 (625)
Q Consensus 355 gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~ 430 (625)
|.|.......+.++++. . +.+.++.+.+.+++.+.|.. .|.+. .. ..++.++.+.+..+...
T Consensus 299 gnpl~~aaa~a~l~~l~--~---~~~~~~~~~~g~~l~~~l~~l~~~~p~v~--~v--rG~Gl~~~ie~~~~~~~----- 364 (421)
T PRK09792 299 GNPLAVAAAHAVLNIID--K---ESLCERANQLGQRLKNTLIDAKESVPAIA--AV--RGLGSMIAAEFNDPQTG----- 364 (421)
T ss_pred CCHHHHHHHHHHHHHHH--h---hhHHHHHHHHHHHHHHHHHHHHHhCCCcc--ee--cccceEEEEEecCCccC-----
Confidence 33333333345555552 1 23445555666666665543 34321 11 11233444433221100
Q ss_pred cccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 431 KIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 431 ~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
.........+...+.+ +||.+.+ ++ + .++.+|+.+++..+++|++
T Consensus 365 ---~~~~~~~~~l~~~~~~-~Gv~i~~---~g-~---------------------------~~~~irl~P~l~i~~~ei~ 409 (421)
T PRK09792 365 ---EPSAAIAQKIQQRALA-QGLLLLT---CG-A---------------------------YGNVIRFLYPLTIPDAQFD 409 (421)
T ss_pred ---CcchHHHHHHHHHHHH-CCcEEee---cC-C---------------------------CCCEEEEeCCCcCCHHHHH
Confidence 0000113456666655 7998852 11 0 1378999999989999999
Q ss_pred HHHHHHHHHHH
Q 043646 511 FILAALEFIAA 521 (625)
Q Consensus 511 ~ll~aL~~~~~ 521 (625)
+++++|.+++.
T Consensus 410 ~~~~~l~~~l~ 420 (421)
T PRK09792 410 AAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 319
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=6.2e-12 Score=137.15 Aligned_cols=359 Identities=15% Similarity=0.065 Sum_probs=194.0
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..| .-|+|..+ .|...+.|.+++.+++... ..... .....+...++.+++++.+.....
T Consensus 47 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~ 117 (443)
T PRK06058 47 GGIVEDVDG---NRLIDLGSGIAVTSVGNSAPRVVEAVREQVARF-THTCF-----MVTPYEGYVAVAEQLNRLTPGDHE 117 (443)
T ss_pred eeEEEeCCC---CEEEEcCcchhhhccCCCCHHHHHHHHHHHHhc-cCccc-----cccCCHHHHHHHHHHHHhCCCCCC
Confidence 344555545 34888644 4566889999999988642 11111 011234455677788887754322
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
+.+.|+.+|+.+.-..+-.++. . .|...+|.....+|.....++...+. .+.
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~ 182 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARS--------------Y-TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVY 182 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHH--------------h-hCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCce
Confidence 3788888898874444332321 1 12222344444555555444332221 122
Q ss_pred EEecCCCCC------CCH-HHHHHHH---HHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccC
Q 043646 207 EIGLDDNGL------LDI-EALRSQL---ELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 207 ~v~~~~~~~------ld~-~~L~~~l---~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~ 272 (625)
.+|...... .+. +.+++.+ .+....+++.+|++.......|.+.| +++|.++|++||+++|+|+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~ 262 (443)
T PRK06058 183 RAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQ 262 (443)
T ss_pred EcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 333211100 011 1122211 11111246788888887777777765 899999999999999999997
Q ss_pred c-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchh
Q 043646 273 S-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIE 349 (625)
Q Consensus 273 ~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~ 349 (625)
. +|-.. .-....+. .+|+++++ |.+++...+|++++++++ .+.+.+... ++|
T Consensus 263 tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~i--~~~~~~~~~-~~T------------------- 317 (443)
T PRK06058 263 TGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAEI--MDAPHPGGL-GGT------------------- 317 (443)
T ss_pred cCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHHH--HhhccCCCC-CCC-------------------
Confidence 5 22111 00111111 56999886 999754458999999887 333322111 111
Q ss_pred hhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 350 ERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 350 ~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
..|.|-.++++.++++.+ + .+.+.++...+.+++.+.|+++. ...+++.. ..++.++.+.+..+....
T Consensus 318 ---~~gnpl~~aaa~a~L~~~--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~~~~-- 386 (443)
T PRK06058 318 ---YGGNPVACAAALAAIETI--E---EDDLVARARQIEALMTDRLRALAAEDDRIGDV-RGRGAMIAIELVKPGTTE-- 386 (443)
T ss_pred ---CCCCHHHHHHHHHHHHHH--H---HcCHHHHHHHHHHHHHHHHHHHHhhCCcEEee-eccceEEEEEEecCCCCC--
Confidence 123333333334455544 2 22456666777777777775531 11111111 124455555553321000
Q ss_pred cccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 429 NMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 429 ~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
...-....+.+.+.+ +||.+.++..+ ++++|+.+++.+|++|
T Consensus 387 ------~~~~~~~~l~~~~~~-~Gv~~~~~~~~-------------------------------~~~lr~~Ppl~~t~~~ 428 (443)
T PRK06058 387 ------PDAELTKALAAAAHA-AGVIVLTCGTY-------------------------------GNVIRLLPPLVIGDEL 428 (443)
T ss_pred ------CcHHHHHHHHHHHHH-CCeEEeccCCC-------------------------------CCEEEEECCCccCHHH
Confidence 000002345555544 79998753211 2689999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 043646 509 FEFILAALEFIAAY 522 (625)
Q Consensus 509 id~ll~aL~~~~~~ 522 (625)
+++++++|++++.+
T Consensus 429 i~~~~~~l~~~l~~ 442 (443)
T PRK06058 429 LREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 320
>PRK12403 putative aminotransferase; Provisional
Probab=99.56 E-value=1.2e-11 Score=135.33 Aligned_cols=361 Identities=14% Similarity=0.028 Sum_probs=199.2
Q ss_pred CCccccCCCCCCceEeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC
Q 043646 65 NDVEFDYSFGKRRLTYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ 138 (625)
Q Consensus 65 ~~~~~~~p~g~~~~~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~ 138 (625)
.+..+++..|+ .|+|.. ..|...+.|.+++.+++........ ......+...++.++|+++++..-
T Consensus 44 ~G~~l~D~dG~---~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~-----~~~~~~~~~~~lae~L~~~~p~~~ 115 (460)
T PRK12403 44 EGLHLWDNDGK---RYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM-----FFHTTHPAVIELSELLFSLLPGHY 115 (460)
T ss_pred eeeEEEeCCCC---EEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec-----ccccCCHHHHHHHHHHHHhCCCCc
Confidence 34556655553 488843 3456778999999998865321100 000123456678888888886433
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcCCe-----------EE
Q 043646 139 ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSLAE-----------VV 206 (625)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G~~-----------vv 206 (625)
+ .++|+.+|++++..++-.++.... .. =+++.. +|+. ...+|.+...++...|.+ +.
T Consensus 116 ~-~v~f~~SGseA~e~AiklAr~~~~--------~~-g~~~r~-~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~ 184 (460)
T PRK12403 116 S-HAIYTNSGSEANEVLIRTVRRYWQ--------VL-GKPQKK-IMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVA 184 (460)
T ss_pred C-EEEEeCCcHHHHHHHHHHHHHHHH--------hh-CCCCCc-EEEEECCCcCcccHhhhhcCCCccccccCCCCCCCE
Confidence 3 788888898885544433321000 00 012222 3333 345677766665544432 23
Q ss_pred EEecCCC----CCC--------CHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 207 EIGLDDN----GLL--------DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 207 ~v~~~~~----~~l--------d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
.+|.... ..+ ++++|++.+.+ ...+++.+|++..+....|.+.| +++|.++|++||+++|+|+
T Consensus 185 ~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~-~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DE 263 (460)
T PRK12403 185 HIDEPYWYANGGELTPAEFGRRAALQLEEKILE-LGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADE 263 (460)
T ss_pred EeCCCcccccccCCChHHHHHHHHHHHHHHHHH-hCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 3332110 011 13456665542 11246788999999988899888 9999999999999999999
Q ss_pred cCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc---ccCCceEEeeccccccccc
Q 043646 271 AAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS---TCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 271 A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~---~~ggg~v~~~~~~~~~~~~ 343 (625)
++. +|-... .....+. .+|+++++ |.+++.. .+|++++++++.+ .+.+. +..++|
T Consensus 264 V~tGfGRtG~~~a~e~~gv-~PDiv~~g--K~lggG~~Piga~v~~~~i~~--~~~~~~~~~~~~~T------------- 325 (460)
T PRK12403 264 VIGGFGRTGEWFAHEHFGF-EPDTLSIA--KGLTSGYVPMGGLVLSKRIAE--ALVEQGGVFAHGLT------------- 325 (460)
T ss_pred cccCCCcCchhhhhhhcCC-CCCeEEEc--ccccccccceEEEEECHHHHH--HHhcCCCccccCCC-------------
Confidence 985 221111 1111112 46999865 9997543 4688888877732 22110 000011
Q ss_pred cccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHH-HHHHHHHHhhC----CCCcEEEeCCCCCCCcceEEEE
Q 043646 344 YLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQED-VYIESALGRIL----PNQNIQVLGNTSVKRQAILSFL 418 (625)
Q Consensus 344 ~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~-~l~~~l~~~L~----~l~gv~v~~~~~~~~~~i~~f~ 418 (625)
..|.|..++.+.++++.+ +.. .+.++.+ .+.+++.+.|+ +.+.+.-+ ...+..+.+.
T Consensus 326 ---------~~gnPl~~Aaala~L~~i--~~~---~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rG~Gl~~gie 387 (460)
T PRK12403 326 ---------YSGHPVAAAVAIANLKAL--RDE---GVVTRVKDDTGPYLQRCLREVFGDHPLVGEV----QGAGLVAALQ 387 (460)
T ss_pred ---------CCCCHHHHHHHHHHHHHH--Hhc---cHHHHHHHHHHHHHHHHHHHHHhcCCCEEeE----eecceEEEEE
Confidence 123444455555666665 222 2344443 45555555554 33322211 1133445554
Q ss_pred eccCCCCCCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCC
Q 043646 419 VYSTTNSSPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKP 493 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~ 493 (625)
+..+.. ...... ...+...+.+ .||.+++. .
T Consensus 388 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~----------------------------------~ 423 (460)
T PRK12403 388 FAEDKA---------TRKRFANENDLAWRCRTIGFE-EGVIIRST----------------------------------L 423 (460)
T ss_pred EccCcc---------ccccccchhHHHHHHHHHHHh-CCEEEEec----------------------------------C
Confidence 432210 000110 1223344444 68888621 1
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 494 GWTRITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 494 g~iRis~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
+.+|+++++..|++|+|++++++++++.+..+
T Consensus 424 ~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 424 GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999987644
No 321
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=1.3e-11 Score=133.72 Aligned_cols=356 Identities=15% Similarity=0.132 Sum_probs=196.0
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..|+ -|+|..+. |..++.|.+++.+++......... ....+...++.+++++.+.....
T Consensus 31 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~------~~~~~~~~~la~~l~~~~p~~~~ 101 (425)
T PRK07495 31 NAEIWDKEGR---RYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQ------VVPYENYVRLAERLNALVPGDFA 101 (425)
T ss_pred ecEEEeCCCC---EEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccC------ccCCHHHHHHHHHHHHhCCCCCC
Confidence 4556665553 48886443 667889999999988643211110 11233455577778777754322
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC-------------CeEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL-------------AEVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G-------------~~vv 206 (625)
+.+.|+.+|+.+.-..+-.++. . .|...+|.....+|.....++...| ..++
T Consensus 102 ~~v~f~~SGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (425)
T PRK07495 102 KKTIFVTTGAEAVENAVKIARA--------------A-TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVY 166 (425)
T ss_pred CEEEECCchHHHHHHHHHHHHH--------------h-hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeE
Confidence 3799998888874444333331 1 2222234444555555433322111 1234
Q ss_pred EEecCCC-CCCC----HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CC
Q 043646 207 EIGLDDN-GLLD----IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PY 276 (625)
Q Consensus 207 ~v~~~~~-~~ld----~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~ 276 (625)
.+|.+.. ..++ ++++++.+......+++.+|++..+...+|.+.+ +++|.++|++||+++|+|+++.. |.
T Consensus 167 ~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 246 (425)
T PRK07495 167 HVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFAR 246 (425)
T ss_pred EecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCc
Confidence 4554321 1122 4455666642112246888889888877886643 78999999999999999999762 22
Q ss_pred cc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcC
Q 043646 277 VK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENG 354 (625)
Q Consensus 277 ~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~ 354 (625)
.. ......+. .+|+++++ |.+++...+|++++++++. +.+.+...+ .+ ..
T Consensus 247 ~G~~~a~~~~gv-~pDi~tls--K~l~~G~pigav~~~~~i~--~~~~~~~~~-~T----------------------~~ 298 (425)
T PRK07495 247 TGKLFAMEHHEV-AADLTTMA--KGLAGGFPLAAVTGRAEIM--DAPGPGGLG-GT----------------------YG 298 (425)
T ss_pred CCCceeecccCC-CCCEEeeh--hhhcCCccceEEEEcHHHH--hccCCCCcC-CC----------------------CC
Confidence 21 01111111 46776665 9997544579999988873 333221100 00 12
Q ss_pred CChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcE-EEeCCCCCCCcceEEEEeccCCCCCCcc
Q 043646 355 GTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNI-QVLGNTSVKRQAILSFLVYSTTNSSPEN 429 (625)
Q Consensus 355 gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~ 429 (625)
+.|.......++++++ +. +.+.++.+.+.+++.+.|++ .|.+ .+-+ ++-.+.+.+.++....
T Consensus 299 ~~pl~~aaa~a~l~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-----~Gl~~~iel~~~~~~~--- 365 (425)
T PRK07495 299 GNPLGIAAAHAVLDVI--EE---EDLCERANQLGNRLKQRLASLRETVPEIADIRG-----PGFMNAVEFNDADSGL--- 365 (425)
T ss_pred CCHHHHHHHHHHHHHH--Hh---chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec-----CceEEEEEEecCCCCC---
Confidence 3333334344556665 21 24555666666666666644 3332 2222 2233333332211000
Q ss_pred ccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHH
Q 043646 430 MKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEF 509 (625)
Q Consensus 430 ~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edi 509 (625)
....+ ...+.+.+.+ +|+.++.. + + ..+.+||.+++..|++|+
T Consensus 366 ----~~~~~-~~~~~~~~~~-~Gvl~~~~---g-~---------------------------~~~~~r~~Ppl~it~~~i 408 (425)
T PRK07495 366 ----PSAEF-ANRVRLKALE-KGLILLTC---G-V---------------------------HGNVIRFLAPITIQDDVF 408 (425)
T ss_pred ----ccHHH-HHHHHHHHHH-CCeEEeec---C-C---------------------------CCCEEEEeCCCccCHHHH
Confidence 00000 2346666655 79988531 1 0 136799999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 043646 510 EFILAALEFIAAYG 523 (625)
Q Consensus 510 d~ll~aL~~~~~~~ 523 (625)
|+++++|++++.+.
T Consensus 409 d~~~~~l~~~l~~~ 422 (425)
T PRK07495 409 AEALDILEASILEA 422 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988653
No 322
>PRK06062 hypothetical protein; Provisional
Probab=99.56 E-value=1.1e-11 Score=135.31 Aligned_cols=350 Identities=15% Similarity=0.054 Sum_probs=197.7
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| ..|+|..+ .|...+.|.+++.+++...... +. ....+...++.++|++++....+
T Consensus 44 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~-~~------~~~~~~~~~lae~L~~~~p~~~~ 113 (451)
T PRK06062 44 GSYVWDYEG---RRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV-AP------AHANDARSEAARLIAERAPGDLS 113 (451)
T ss_pred eeEEEECCC---CEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCc-CC------ccCCHHHHHHHHHHHHhCCCCCC
Confidence 344555444 35888644 3567789999999988542111 11 01234455677778887754333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-----------eEEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-----------EVVEI 208 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-----------~vv~v 208 (625)
.|.|+.||+.+.-.++-.++. . .|...+|.....+|.....++...|. .+..+
T Consensus 114 -~v~f~~SGsEAve~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 177 (451)
T PRK06062 114 -KVFFTNGGADANEHAVRMARL--------------H-TGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF 177 (451)
T ss_pred -EEEEcCChHHHHHHHHHHHHH--------------h-hCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe
Confidence 899998888874444333331 1 22222344444555555444433221 12222
Q ss_pred ecCCCCC------CC-------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEecc
Q 043646 209 GLDDNGL------LD-------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 209 ~~~~~~~------ld-------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A 271 (625)
+...... -| +++|++++.. ...+++.+|++..+....|.+.| +++|.++|++||+++|+|++
T Consensus 178 ~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV 256 (451)
T PRK06062 178 FGPFLYRSEFHATTEEEECERALAHLERVIEL-EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEV 256 (451)
T ss_pred CCCCccccccCCCChHHHHHHHHHHHHHHHHh-cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecc
Confidence 2211110 12 5777887753 11246789999999988999988 99999999999999999999
Q ss_pred CcC-CCccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc-ccCCceEEeecccccccccccc
Q 043646 272 ASG-PYVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS-TCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 272 ~~~-g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~-~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
+.. |-... -....+. .+|+++++ |.+++.. .+|++++++++. +.+.+. +..+.|
T Consensus 257 ~tGfGRtG~~~a~~~~gv-~PDi~t~g--K~lggG~~Pigav~~~~~i~--~~~~~~~~~~~~T---------------- 315 (451)
T PRK06062 257 MAGFGRTGKWFAIEHFGV-VPDLITFA--KGVNSGYVPLGGVAISEAIA--ATFADRPYPGGLT---------------- 315 (451)
T ss_pred ccCCCcCcHHHHHHhcCC-CCCeeeec--hhhhcCCcCcEEEEEcHHHH--HHhccCCCCCCCC----------------
Confidence 773 21110 0111112 57988776 9997632 368888888873 222111 011111
Q ss_pred chhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHhhCC----CCcE-EEeCCCCCCCcceEEEEec
Q 043646 347 DIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYI-ESALGRILP----NQNI-QVLGNTSVKRQAILSFLVY 420 (625)
Q Consensus 347 ~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~-~~l~~~L~~----l~gv-~v~~~~~~~~~~i~~f~~~ 420 (625)
..|.|..++...++++.+. .. .+.++...+. +++.+.|++ .|.+ .+-+ .+.++.+.+.
T Consensus 316 ------~~gnpl~~Aaa~a~L~~l~--~~---~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG-----~Gl~~gve~~ 379 (451)
T PRK06062 316 ------YSGHPLACAAAVATINAME--EE---GIVENAARIGAEVLGPGLRELAERHPSVGEVRG-----LGVFWALELV 379 (451)
T ss_pred ------CCCCHHHHHHHHHHHHHHH--hc---CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEec-----cccEEEEEEc
Confidence 1234444444456666652 22 3445555554 355555443 3332 2221 3344444443
Q ss_pred cCCCCCCccccccCCCCC--------ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCC
Q 043646 421 STTNSSPENMKIERNKPL--------HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVK 492 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l--------~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~ 492 (625)
.+.. ...++ ....+.+.|.+ +||.+...
T Consensus 380 ~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~---------------------------------- 415 (451)
T PRK06062 380 ADRE---------TREPLAPYGASSAAMAAVKAACKE-RGLLPFVN---------------------------------- 415 (451)
T ss_pred cccc---------ccCCCcccchhhHHHHHHHHHHHH-CCcEEeec----------------------------------
Confidence 2110 00111 12356666654 69887521
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 493 PGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 493 ~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.+.+|+++++.+|++|+|++++++++++...
T Consensus 416 ~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 416 GNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 2679999999999999999999999988664
No 323
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.56 E-value=3e-12 Score=139.31 Aligned_cols=337 Identities=15% Similarity=0.095 Sum_probs=181.8
Q ss_pred eEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 043646 78 LTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTA 151 (625)
Q Consensus 78 ~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtta 151 (625)
..|+|..+ .|..++.|.+++.+++.... +.. .......+++++|++.+... + .|+|+.+|+.+
T Consensus 48 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~------~~~~~~~~lae~l~~~~~~~-~-~v~~~~sGseA 116 (423)
T TIGR00713 48 NEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT---SYG------APTEAEILLAKEIISRVPSV-E-MVRFVNSGTEA 116 (423)
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhCC---cCC------CCCHHHHHHHHHHHHhCCcc-c-EEEEeCCHHHH
Confidence 35888643 34678999999999885421 110 11234566888888887643 3 79999777777
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH-HHHH--cCCe-----------------EEEEecC
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL-SWRQ--SLAE-----------------VVEIGLD 211 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~-~~~~--~G~~-----------------vv~v~~~ 211 (625)
....+-.++. ....+ .|+.....|+.... .+.. .|.. +..++
T Consensus 117 ~e~Alk~ar~--------------~~gr~--~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (423)
T TIGR00713 117 TMSAVRLARG--------------YTGRD--KIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLP-- 178 (423)
T ss_pred HHHHHHHHHH--------------hhCCC--EEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeC--
Confidence 4443333321 11223 35555544444322 2211 1111 11122
Q ss_pred CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCCcccc--CCCCC
Q 043646 212 DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVKIN--LRSRN 285 (625)
Q Consensus 212 ~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~~~id--~~~~~ 285 (625)
..|+++|++++++. .+++++|++....+.+|.+.| +++|.++|++||+++|+|+++..-..... ....+
T Consensus 179 ---~~d~~~l~~~i~~~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~ 253 (423)
T TIGR00713 179 ---YNDLEALEEVFEEY--GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFG 253 (423)
T ss_pred ---CCCHHHHHHHHHHc--CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhC
Confidence 12789999998732 246788888655555898877 68999999999999999999753211000 00111
Q ss_pred CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhc-CCChhHHHHHH
Q 043646 286 IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEEREN-GGTPQIVQMIR 364 (625)
Q Consensus 286 ~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~ 364 (625)
. .+|++ ++.|.+++...+|++++++++. +.+.+. +... .... .+.|.....+.
T Consensus 254 ~-~pDi~--t~sK~l~~G~pig~v~~~~~i~--~~~~~~---~~~~------------------~~~T~~~~~~~~aaa~ 307 (423)
T TIGR00713 254 V-EPDLT--TLGKIIGGGLPVGAFGGRREIM--ERLAPE---GPVY------------------QAGTLSGNPLAMAAGL 307 (423)
T ss_pred C-Ccchh--hhhhhhcCCCceeeeeEHHHHH--HhhCcC---CCee------------------eccCCCCCHHHHHHHH
Confidence 1 45765 4679997433479999998873 333210 0000 0001 12233333334
Q ss_pred HHHHHHHHhhcC-HHHHHHHHHHHHHHHHHhhCCCCcE-EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC---
Q 043646 365 AALAFWVKEYIG-YEVIKKQEDVYIESALGRILPNQNI-QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH--- 439 (625)
Q Consensus 365 aal~~~~~~~~g-~~~i~~~~~~l~~~l~~~L~~l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~--- 439 (625)
++++.+ +..+ .+.+.+....+.+.+.+.+.+.+-+ .+.+ .+.++.+.+..+...+ . ......+
T Consensus 308 a~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~-----~g~~~~v~~~~~~~~~---~--~~~~~~~~~~ 375 (423)
T TIGR00713 308 ATLKLL--DEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNR-----VGSMFSLFFTEEEVTN---Y--ADAKKSDTEL 375 (423)
T ss_pred HHHHHH--hcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-----eccEEEEEEecCCCCC---h--hhhhcccHHH
Confidence 555554 2222 3344444444555555555554221 1222 2344544332211000 0 0000011
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
...+++.|.+ +||.+.++. .+.+|+++. +|++|+++++++|+++
T Consensus 376 ~~~~~~~l~~-~Gv~v~~~~---------------------------------~~~~~l~~~--~t~~~i~~~~~~l~~~ 419 (423)
T TIGR00713 376 FAKFFHEMLD-KGVFLPPSQ---------------------------------FEACFLSAA--HTEEDIENTIEAAEEV 419 (423)
T ss_pred HHHHHHHHHH-CCeEEecCC---------------------------------ccceeeECC--CCHHHHHHHHHHHHHH
Confidence 1246667765 799986321 145788875 6999999999999988
Q ss_pred HHh
Q 043646 520 AAY 522 (625)
Q Consensus 520 ~~~ 522 (625)
+.+
T Consensus 420 l~~ 422 (423)
T TIGR00713 420 FAE 422 (423)
T ss_pred Hhh
Confidence 754
No 324
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.56 E-value=1.9e-11 Score=133.76 Aligned_cols=358 Identities=15% Similarity=0.131 Sum_probs=190.6
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..|+ -|+|..+. |...+.|.+++.+++.... +... .....+...++.++|++++.....
T Consensus 45 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~~---~~~~~~~~~~la~~L~~~~p~~~~ 115 (451)
T PRK06918 45 GALVTDVDGN---QYIDFAGAIGTINVGHSHPKVKEALHKQVDQYI---HTGF---NVMMYEPYIELAEKLAALAPGSFD 115 (451)
T ss_pred ccEEEeCCCC---EEEEcCCchhhcCCCCCCHHHHHHHHHHHHhcc---Cccc---cccccHHHHHHHHHHHHhCCCCCC
Confidence 3445555453 48886433 5678899999999886431 1100 001234456677888888764332
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
+.+.|+.+|+.+.-.++-.++. . .|.+.+|.....+|.....++...+- .+.
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~ 180 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARK--------------Y-TKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVY 180 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHH--------------H-hCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcE
Confidence 3799998888874443332321 1 12222344444555555434332221 123
Q ss_pred EEecCC-----CCCCC-------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 207 EIGLDD-----NGLLD-------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 207 ~v~~~~-----~~~ld-------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
.+|... .+... ++.+++.+......+++.+|++..+....|.+.| +++|.++|++||+++|+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DE 260 (451)
T PRK06918 181 KAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADE 260 (451)
T ss_pred EcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 333221 11100 1234443321112246778888877777787655 7889999999999999999
Q ss_pred cCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 271 AAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 271 A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
++. ++... ..+..++. .+|+++ +.|.+++...+|++++++++. +.+.+... +.+
T Consensus 261 V~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~i~--~~~~~~~~-~~T----------------- 317 (451)
T PRK06918 261 IQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKEIM--DESAPGEL-GGT----------------- 317 (451)
T ss_pred cccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHHHH--hccCCCCc-CcC-----------------
Confidence 965 33221 11222211 368665 559997444589999998873 33322110 011
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
..|.|....+..++++++ +. +.+.++.+.+.+++.++|+++ +.+.-+. ..+.++.+....+.
T Consensus 318 -----~~g~~l~~aaa~a~l~~i--~~---~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vr----g~G~~~~~~~~~~~ 383 (451)
T PRK06918 318 -----YAGSPLGCAAALAVLDII--EK---ENLNDRAIELGKVVMNRFEEMKNKYNCIGDVR----GLGAMCAFELVQDR 383 (451)
T ss_pred -----CCcCHHHHHHHHHHHHHH--HH---CCHHHHHHHHHHHHHHHHHHHHhhCCCceeec----cceeEEEEEEccCC
Confidence 012233333334455554 22 234445555556666655443 3221121 13445444443111
Q ss_pred CCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 043646 424 NSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY 503 (625)
Q Consensus 424 ~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~ 503 (625)
... .........+.+.+.+ +||.+.++..+ .+++|+++++.
T Consensus 384 ~~~-------~~~~~~~~~l~~~~~~-~Gvlv~~~~~~-------------------------------~~~lrl~p~l~ 424 (451)
T PRK06918 384 KTK-------EPDKTLTANICKEANK-RGLLLLSAGTY-------------------------------GNVIRVLMPLV 424 (451)
T ss_pred CcC-------CCcHHHHHHHHHHHHH-CCeEEeecCCC-------------------------------CCEEEEECCCc
Confidence 000 0000012345555544 79999764322 26799999888
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 043646 504 MSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 504 ~t~edid~ll~aL~~~~~~~ 523 (625)
.++++++.++++|++++...
T Consensus 425 ~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 425 ITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999988654
No 325
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=1.7e-11 Score=133.47 Aligned_cols=354 Identities=15% Similarity=0.099 Sum_probs=195.5
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..| .-|+|..+. |...+.|.+++.+++.... ..... ....+...++.++|.+.+..+..
T Consensus 45 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~ 115 (441)
T PRK05769 45 GVWVEDVDG---NVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFL-HYSLT-----DFYYEPAVELAERLVEIAPGGFE 115 (441)
T ss_pred eEEEEeCCC---CEEEECCCchhhcccCCCCHHHHHHHHHHHHhcc-CccCc-----ccCCHHHHHHHHHHHHhCCCCCC
Confidence 344555445 348886443 4456899999999885421 11100 01123456677888887753222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
+.|.|+.+|+.+.-.++-.++. . .|.+.+|.....+|.....++...|. .+.
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~--------------~-tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~ 180 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARY--------------H-TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVI 180 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHH--------------H-hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeE
Confidence 3899998888885544433331 1 22222333444555555444432221 233
Q ss_pred EEecCCCCC-----C--------CHHHHHHHH-HHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEE
Q 043646 207 EIGLDDNGL-----L--------DIEALRSQL-ELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACF 268 (625)
Q Consensus 207 ~v~~~~~~~-----l--------d~~~L~~~l-~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~viv 268 (625)
.++...... - +++.+++.+ +.....+++.+|++..+....|.+.| +++|.++|++||+++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~ 260 (441)
T PRK05769 181 HVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLID 260 (441)
T ss_pred EeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 344321100 0 123355523 21012356889999999999999988 99999999999999999
Q ss_pred eccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccc
Q 043646 269 DFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYL 345 (625)
Q Consensus 269 D~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (625)
|+++. +|... .....++. .+|+++++ |.+++...+|++++++++. ... +.. .+.+
T Consensus 261 DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~i~--~~~-~~~-~~~T--------------- 318 (441)
T PRK05769 261 DEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAELM--FLP-PGS-HANT--------------- 318 (441)
T ss_pred echhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehhhh--hcC-CCC-CCCC---------------
Confidence 99977 32221 11112211 46988765 9887544578888888873 211 111 0111
Q ss_pred cchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCC
Q 043646 346 EDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTN 424 (625)
Q Consensus 346 ~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~ 424 (625)
+ .|.|..+..+.++++.+ +. .+.++.+.+.+++++.|.++. ...+++.. ..++.++.+.+..+..
T Consensus 319 ------~-~g~p~~~aaa~a~L~~l--~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~~~~~~~ 384 (441)
T PRK05769 319 ------F-GGNPVAAAAALATLEEL--EE----GLLENAQKLGEYLRKELKELKEKYEFIGDV-RGLGLMIGVELVKDRK 384 (441)
T ss_pred ------C-CcCHHHHHHHHHHHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ecceEEEEEEeccCCc
Confidence 1 23333333334555554 21 455667777777777775431 01111111 1133445444432110
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
+ ...-....+.+.+.+ +||.+.+. ....+|+++++.+
T Consensus 385 -~--------~~~~~~~~~~~~~~~-~Gil~~~~---------------------------------~~~~lr~~p~l~~ 421 (441)
T PRK05769 385 -E--------PDPKLRDKVLYEAFK-RGLLLLGA---------------------------------GKSAIRIIPPLII 421 (441)
T ss_pred -c--------ccHHHHHHHHHHHHh-CCcEEecC---------------------------------CCCEEEEeCCCCC
Confidence 0 000012346666654 69887521 1267999999999
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 043646 505 SNEEFEFILAALEFIAAY 522 (625)
Q Consensus 505 t~edid~ll~aL~~~~~~ 522 (625)
|++|+|++++++++++..
T Consensus 422 t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 422 TEEEADIGLEILEEAIKE 439 (441)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 326
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.56 E-value=3.2e-12 Score=138.26 Aligned_cols=352 Identities=13% Similarity=0.064 Sum_probs=195.7
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..|+ -|+|..+. |...+.|.+++.+++.+....... ....+...++.++|++++..+.+
T Consensus 34 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~------~~~~~~~~~la~~L~~~~p~~~~ 104 (428)
T PRK07986 34 GCELILADGR---RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG------GITHPPAIELCRKLVAMTPQPLE 104 (428)
T ss_pred eeEEEeCCCC---EEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc------ccCCHHHHHHHHHHHhhCCCCcC
Confidence 3445555553 48886543 567789999999988653211110 01123455677778777754333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
.+.|+.||+++.-.++-.++... + ....+...+|.....+|.....++...+- .++
T Consensus 105 -~v~f~~SGsEAve~AlklAr~~~-----~-----~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~ 173 (428)
T PRK07986 105 -CVFLADSGSVAVEVAMKMALQYW-----Q-----AKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENL 173 (428)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHH-----H-----hcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCE
Confidence 89999888887333332222100 0 00122222344444555544333322121 122
Q ss_pred EEecCCC------CCCCHHHHHHHHHHhhhCCCCeEEEEecc-cCccccccC----HHHHHHHHHHcCCEEEEeccCcC-
Q 043646 207 EIGLDDN------GLLDIEALRSQLELYKAAKRPMLGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAASG- 274 (625)
Q Consensus 207 ~v~~~~~------~~ld~~~L~~~l~~~~~~~~~~lv~~~~~-~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~- 274 (625)
.++.... ..-|++++++.+.. ..++..+|++... +...|.+.+ +++|.++|++||+++|+|+++..
T Consensus 174 ~~~~p~~~~~~~~~~~d~~~l~~~l~~--~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~ 251 (428)
T PRK07986 174 FAPAPQSRFDGEWDERDIAPFARLMAA--HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGF 251 (428)
T ss_pred EECCCCcccchhhHHHHHHHHHHHHHh--CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 3332110 02356778888863 2245678888875 556676532 89999999999999999999742
Q ss_pred CCccc--cCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCc----ccCCceEEeeccccccccccccc
Q 043646 275 PYVKI--NLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPS----TCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 275 g~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~----~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
|-..- -....+. .+|++++ .|.++|. ..+|++++++++. +.+.+. +..+.+
T Consensus 252 GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~i~--~~~~~~~~~~~~~~~T----------------- 309 (428)
T PRK07986 252 GRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTREVA--ETISNGEAGCFMHGPT----------------- 309 (428)
T ss_pred ccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHHHH--HHhhcCCCCccccCCC-----------------
Confidence 21110 1111111 4688875 4998654 2467778888873 222110 000111
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSP 427 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~ 427 (625)
..|.|..++.+.++++.+..+ .+.++..++.+++.+.|.++.....++.. ..++.++.+.+..+.
T Consensus 310 -----~~g~p~~~aaa~a~L~~i~~~-----~~~~~~~~~g~~l~~~l~~l~~~~~i~~v-Rg~Gl~~~ve~~~~~---- 374 (428)
T PRK07986 310 -----FMGNPLACAVANASLSLLESG-----DWQQQVAAIEAQLREELAPLRDAPMVADV-RVLGAIGVVETTRPV---- 374 (428)
T ss_pred -----CCcCHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccceEEEEEeCCcc----
Confidence 124444555555666665221 34566667777777776654111111111 123445555443211
Q ss_pred ccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 428 ~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
....+.+.|.+ +||.+++. ...+|+.+++..|++
T Consensus 375 -----------~~~~~~~~l~~-~Gl~~~~~----------------------------------g~~i~~~Ppl~it~~ 408 (428)
T PRK07986 375 -----------NMAALQRFFVE-QGVWIRPF----------------------------------GKLIYLMPPYIILPE 408 (428)
T ss_pred -----------cHHHHHHHHHH-CCcEEEec----------------------------------CCEEEEeCCCCCCHH
Confidence 13467777755 79988631 157999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 043646 508 EFEFILAALEFIAAY 522 (625)
Q Consensus 508 did~ll~aL~~~~~~ 522 (625)
|+++++++|.+++..
T Consensus 409 ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 409 QLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998754
No 327
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.55 E-value=1.1e-11 Score=133.61 Aligned_cols=347 Identities=14% Similarity=0.095 Sum_probs=190.6
Q ss_pred CCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC
Q 043646 65 NDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ 138 (625)
Q Consensus 65 ~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~ 138 (625)
.+..+++..|+ -|+|..+ .|...+.|.+++.+++......... ...+...++.++|.+.....
T Consensus 30 ~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-------~~~~~~~~la~~L~~~~~~~- 98 (408)
T PRK04612 30 QGSRVWDDQGR---EYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNV-------FYSAPPLKLAEELVTASRFA- 98 (408)
T ss_pred eeCEEEECCCC---EEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccc-------cCCHHHHHHHHHHHhhCCCC-
Confidence 34556666553 4888643 3567889999999988643111110 11233445667777665422
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcCCe------------E
Q 043646 139 ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSLAE------------V 205 (625)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G~~------------v 205 (625)
+.+.|+.||+.+.-.++-.++.... . .+-.++ +..|+. ....|.....++...|-. +
T Consensus 99 -~~v~f~~sGseA~e~AlklAr~~~~-----~---~g~~~~-r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~ 168 (408)
T PRK04612 99 -EKVFLCNSGTEANEAAIKLVRKWAS-----S---QGRPAD-KRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGF 168 (408)
T ss_pred -CEEEEcCchHHHHHHHHHHHHHHHH-----h---hCCCCC-CcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCc
Confidence 3799998888874444433321100 0 000112 223444 444555544444332211 1
Q ss_pred EEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc-cC----HHHHHHHHHHcCCEEEEeccCc-CCCccc
Q 043646 206 VEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY-SD----TRSIARLLHQYGGFACFDFAAS-GPYVKI 279 (625)
Q Consensus 206 v~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~-~~----l~~I~~la~~~g~~vivD~A~~-~g~~~i 279 (625)
+.++ ..|++.+++++.. +.+.+|++.. .+.+|.+ .+ +++|.++|++||+++|+|+++. +|....
T Consensus 169 ~~~~-----~~d~~~l~~~~~~----~~~aavi~eP-~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~ 238 (408)
T PRK04612 169 RYVD-----FNDVEALEAAMAG----GDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT 238 (408)
T ss_pred eEcC-----CCCHHHHHHhhCC----CCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 1222 1278888888852 3455665554 4555544 32 7899999999999999999976 222111
Q ss_pred cCCCCC-CCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChh
Q 043646 280 NLRSRN-IDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQ 358 (625)
Q Consensus 280 d~~~~~-~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~ 358 (625)
-+.... .-.+|++++ .|.+++...+|++++++++. +.+..... +.+ ..+.|.
T Consensus 239 ~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~~~~~~--~~~~~~~~-~~t----------------------~~~~p~ 291 (408)
T PRK04612 239 LFAHWQEQVTPDIVTL--AKALGGGFPIGAMLAGPKVA--ETMQFGAH-GTT----------------------FGGNPL 291 (408)
T ss_pred hhhhhhcCCCCCEEEE--cchhcCCCceEEEEECHHHH--hhhcCCCc-CCC----------------------CCCCHH
Confidence 010000 013466655 59997434478888887762 22221110 000 123344
Q ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC
Q 043646 359 IVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP 437 (625)
Q Consensus 359 ~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~ 437 (625)
...++.++++.+ +. +.+.++.+.+.+++.+.|.++. ...+++.. ..++.++.+.+.++..
T Consensus 292 ~~aaa~a~L~~~--~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~v-rg~Gl~~~i~~~~~~~------------- 352 (408)
T PRK04612 292 AAAVARVALRKL--AS---PQIAANVARQSAALRAGLEALNAEFGVFAQV-RGRGLMLGAVLAPAHA------------- 352 (408)
T ss_pred HHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeee-eccceEEEEEecCchh-------------
Confidence 444445555554 21 3556677777777777776541 11111111 1234444544432110
Q ss_pred CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 438 LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 438 l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
-....+.+.+.+ +||.+.+. .++.+|+.+++..|++|+++++++|+
T Consensus 353 ~~a~~i~~~l~~-~Gvlv~~~---------------------------------g~~~lRl~Ppl~it~eeid~~l~~l~ 398 (408)
T PRK04612 353 GQAGAILDLAAE-HGLLLLQA---------------------------------GPDVLRFVPALNLTDAELADGLARLR 398 (408)
T ss_pred hHHHHHHHHHHH-CCeEEeeC---------------------------------CCCEEEEcCCccCCHHHHHHHHHHHH
Confidence 013467777754 79998531 13679999999999999999999999
Q ss_pred HHHHh
Q 043646 518 FIAAY 522 (625)
Q Consensus 518 ~~~~~ 522 (625)
+++.+
T Consensus 399 ~~l~~ 403 (408)
T PRK04612 399 LALAD 403 (408)
T ss_pred HHHHH
Confidence 98865
No 328
>PRK06105 aminotransferase; Provisional
Probab=99.55 E-value=4.9e-12 Score=138.24 Aligned_cols=369 Identities=12% Similarity=0.054 Sum_probs=202.1
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..+ .|..++.|.+++.+++.... ..+. .+....+...++.+.|++++..+-+
T Consensus 39 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~-~~~~----~~~~~~~~~~~lae~L~~~~p~~~~ 110 (460)
T PRK06105 39 GIYVYDDAG---KRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLP-FYHT----FSHKSHGPVIDLAEKLVAMAPVPMS 110 (460)
T ss_pred EEEEEECCC---CEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCC-Ceec----ccccCCHHHHHHHHHHHHhCCCCCC
Confidence 344555545 34888643 34568899999999886421 0011 0011234456677888888754333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~ 207 (625)
.|.|+.+|+++.-.++-.++... +.+ -.++...+|.+...+|.....++...|. .+..
T Consensus 111 -~v~f~~SGseAve~AlKlar~~~-----~~~----g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~ 180 (460)
T PRK06105 111 -KVFFTNSGSEANDTVVKLVWYYN-----NAL----GRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILH 180 (460)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHH-----Hhc----CCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEE
Confidence 78998888888433222221000 000 0123332344455566655443322221 1222
Q ss_pred EecCCCCC-------------CCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 208 IGLDDNGL-------------LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 208 v~~~~~~~-------------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
++...... ...+++++++.. ...+++.+|++..+....|.+.+ +++|.++|++||+++|+|+
T Consensus 181 ~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~-~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DE 259 (460)
T PRK06105 181 TGCPHYYRFGLPGESEEAFATRLANELEALILA-EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADE 259 (460)
T ss_pred cCCCcccccccCCCChHHHHHHHHHHHHHHHHH-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEec
Confidence 32211000 123567777742 11246789999999888898877 8999999999999999999
Q ss_pred cC-cCCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 271 AA-SGPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 271 A~-~~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
++ ++|-.. ......+. .+|+++++ |.+++.. .+|++++++++.. .+.+.....+.+
T Consensus 260 v~tG~GRtG~~f~~~~~~v-~PDi~~~g--K~lggG~~P~~av~~~~~i~~--~~~~~~~~~~~~--------------- 319 (460)
T PRK06105 260 VICGFGRTGNMFGCETFGI-KPDILVMS--KQLSSSYQPLSAVLMNEKVYD--PIADESGKIGTF--------------- 319 (460)
T ss_pred cccCCCcCchhhhHHhcCC-CCCeeeee--cccccCcccceEEEEcHHHHH--HHhcccccCccc---------------
Confidence 97 454321 01111111 57988877 9997542 3688888888732 221110000000
Q ss_pred chhhhh-cCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCC
Q 043646 347 DIEERE-NGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNS 425 (625)
Q Consensus 347 ~~~~~~-~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~ 425 (625)
.... ..|.|-.+++..+.++.+.. +.+.++.+.+.+++.+.|+++....++... ..++.++.+.+..+..
T Consensus 320 --~h~~T~~gnpl~~aaa~a~L~~i~~-----~~l~~~v~~~g~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~~~~- 390 (460)
T PRK06105 320 --GHGFTASGHPVAAAVALENLAIIEE-----RDLVGNAAERGARLQARLRALADHPLVGEV-RGVGLIAAVELVADKA- 390 (460)
T ss_pred --ccCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHHHHhhcCCCeEEE-EecceEEEEEEecCcc-
Confidence 0000 12334444444556666531 245567777777777777654211111111 1234444554432210
Q ss_pred CCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 426 SPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 426 ~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
...+.+ ...+...+.+ +||.+.+. .+.+|+++
T Consensus 391 --------~~~~~~~~~~~a~~i~~~~~~-~Gvl~~~~----------------------------------g~~i~l~P 427 (460)
T PRK06105 391 --------TKTPFEPPGKVGARANAAAHE-HGVISRAM----------------------------------GDTLAFCP 427 (460)
T ss_pred --------cCCCCCchhHHHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEEC
Confidence 001111 2346666654 79988631 15799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 501 PYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 501 ~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
++..|++|+|++++++.+++.+..+
T Consensus 428 pl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 428 PLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999877654
No 329
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=5.5e-12 Score=124.40 Aligned_cols=344 Identities=17% Similarity=0.169 Sum_probs=218.4
Q ss_pred CCCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhH-HHHHHHHHHHHHHHHHhCC
Q 043646 64 GNDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQ-RMTKMVHEASNYIKRCLGG 136 (625)
Q Consensus 64 ~~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~-~~~~~~~~~~~~ia~~~g~ 136 (625)
+.+.++++|-|++ |||.-+ .|.+.+.|.++++++....+- .++ -..+...+..+.+.+++|.
T Consensus 48 a~g~~vwD~eGk~---ylDflsaysaVnqGhchpki~~aLqeq~~kLtl--------ssrafYnd~~~~f~~~vt~lf~~ 116 (427)
T KOG1402|consen 48 AKGSRVWDPEGKE---YLDFLSAYSAVNQGHCHPKIIKALQEQADKLTL--------SSRAFYNDVLGEFAEYVTKLFGY 116 (427)
T ss_pred cCCcEEECCCccc---hhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhh--------hhHHHhhhhHHHHHHHHHHhcCc
Confidence 4457788887754 777422 345788999999887754321 112 2356777889999999998
Q ss_pred CCCCcEEEeCChHHH--HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH----------HHHHHcCC-
Q 043646 137 GQADAIIFCGAGTTA--AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL----------LSWRQSLA- 203 (625)
Q Consensus 137 ~~~~~vift~sGtta--al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~----------~~~~~~G~- 203 (625)
+ .|+-+..|+.+ ....+++-++.... .+ |.++..|+....+++.-. .+|+..|-
T Consensus 117 ~---kvlpmnTGaEa~Eta~KLaR~wgy~~K---------~i-p~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~ 183 (427)
T KOG1402|consen 117 D---KVLPMNTGAEAVETACKLARKWGYRKK---------NI-PKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPF 183 (427)
T ss_pred c---eeeecccchhHHHHHHHHHHHHHHhhc---------cC-CccceeEEEecccccCceeeeEEecCCcchhhccCCC
Confidence 5 56666567666 23334444442222 12 333334554444443322 12333331
Q ss_pred ---eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 204 ---EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 204 ---~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
.+..||.+ |.++|+.+|++ ++.+.+++...+..-|++.| ++.+.++|.+|++++|.|++|..-.
T Consensus 184 ~P~~~~~v~Y~-----d~eale~~l~~----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~ 254 (427)
T KOG1402|consen 184 LPGVVDKVPYG-----DAEALEVALKS----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLA 254 (427)
T ss_pred CCCcceeeccC-----CHHHHHHHhcC----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccc
Confidence 24455544 78999999985 67889999999999999977 7899999999999999999987432
Q ss_pred c-----cccCCCCCCCCCcEEEEcCCCCCCC-CCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 277 V-----KINLRSRNIDGYDAIFLATHKFLGG-PGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 277 ~-----~id~~~~~~~~~D~v~~S~hK~lgg-p~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
. ..|.... .+|++.+. |.|+| ....+.++.++++ +..++|...|. |
T Consensus 255 RTGk~la~d~env---~PDivilg--KalSGG~~Pvsavl~~~~i--m~~~~pgeHgs-T-------------------- 306 (427)
T KOG1402|consen 255 RTGKLLACDYENV---RPDIVILG--KALSGGVYPVSAVLADDDI--MLNIKPGEHGS-T-------------------- 306 (427)
T ss_pred ccCcEEEeehhhc---CCCeEEEe--ccccCCeeeeEEEEecHHH--HhccCCCcccc-c--------------------
Confidence 2 2344443 78999887 88843 3446777788887 33344443221 1
Q ss_pred hhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc-E-EEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 351 RENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN-I-QVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 351 ~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g-v-~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
..|.|--+...-|+++++. .+.+.++...+...++.+|.+++. + +++... ..|+-+....+.+..
T Consensus 307 --yggNpLg~~vaiAalevi~-----eekL~era~~lG~~l~~~L~~l~~~~p~~v~~V-RGrGl~~ai~i~~~~----- 373 (427)
T KOG1402|consen 307 --YGGNPLGCAVAIAALEVIV-----EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEV-RGRGLLNAIVINPSK----- 373 (427)
T ss_pred --cCCChHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccccccchhhee-eccceEEEEEecccc-----
Confidence 1234444444456676663 357888999999999999988742 1 111111 123444444444321
Q ss_pred cccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 429 NMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 429 ~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
..+.+.-+++-.| +..|+...+- | ...+|++++...+++|
T Consensus 374 ------~~~~~aw~~cl~l-k~~g~LAkpt--------H-------------------------~~IiRfaPPL~I~e~d 413 (427)
T KOG1402|consen 374 ------TSGQDAWDVCLAL-KENGLLAKPT--------H-------------------------GNIIRFAPPLVISEED 413 (427)
T ss_pred ------ccchhHHHHHHcc-cccccccCCC--------C-------------------------CCeEEecCCcccCHHH
Confidence 2234455677666 4467776532 1 2689999999999999
Q ss_pred HHHHHHHHHHHHH
Q 043646 509 FEFILAALEFIAA 521 (625)
Q Consensus 509 id~ll~aL~~~~~ 521 (625)
++.-+++|++.+.
T Consensus 414 l~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 414 LREGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998753
No 330
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.54 E-value=3.4e-12 Score=135.16 Aligned_cols=334 Identities=19% Similarity=0.151 Sum_probs=211.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeC-ChHHH---HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCC
Q 043646 115 VGQRMTKMVHEASNYIKRCLGGGQADAIIFCG-AGTTA---AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYE 190 (625)
Q Consensus 115 ~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~-sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~ 190 (625)
...++.+++.++++++++..|.+ .+.|-. +|+.. +|..+-.-+. .-..|.+.+.+++-..
T Consensus 576 QaqGY~~lf~~Le~~Lc~iTG~D---~~s~QPNsGA~GEYaGL~~IRaY~~-------------~kge~hRnvClIPvSA 639 (1001)
T KOG2040|consen 576 QAQGYQQLFTELEKDLCEITGFD---SFSLQPNSGAQGEYAGLRVIRAYLE-------------SKGEGHRNVCLIPVSA 639 (1001)
T ss_pred HHhhHHHHHHHHHHHhheeeccc---ceeecCCCCcccchhhHHHHHHHHH-------------hccCCcceeEEEeecc
Confidence 34567788999999999999986 445543 23332 4443322111 1245667789999999
Q ss_pred CchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccccc-CHHHHHHHHHHcCCEEEEe
Q 043646 191 HHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS-DTRSIARLLHQYGGFACFD 269 (625)
Q Consensus 191 h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~-~l~~I~~la~~~g~~vivD 269 (625)
|..+..+..+.|.+|+.|.++.+|.+|+.+|+++.+++ .+.-.++.++.|++. |++. .+++++++.|+||.-|..|
T Consensus 640 HGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh--~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVYlD 716 (1001)
T KOG2040|consen 640 HGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKH--KDNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVYLD 716 (1001)
T ss_pred cCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHh--hhhhheeEEeccccc-ccccccHHHHHHHHHhcCCEEEec
Confidence 99999999999999999999999999999999988753 346678888888754 7774 5999999999999999999
Q ss_pred ccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCC-----CCceEEEEeccccccCCCCCcccCCceEEeecccccccccc
Q 043646 270 FAASGPYVKINLRSRNIDGYDAIFLATHKFLGGP-----GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY 344 (625)
Q Consensus 270 ~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp-----~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (625)
+|.--..+.+- +++ .-|.|+.-++.||.|.-| .|.|-+.|++.+. |+.++...|+.. ...++..
T Consensus 717 GANMNAqVGlc-~pG-d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLa------pfLP~HpVvs~~---~~~~~~~ 785 (1001)
T KOG2040|consen 717 GANMNAQVGLC-RPG-DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA------PFLPSHPVVSPG---RPEDTSP 785 (1001)
T ss_pred CCCccceeccc-CCc-cccccceeecccceeeecCCCCCCCCCccchhhhcc------ccCCCCCccCCC---CCCCCCC
Confidence 99554333221 111 118899999999999433 2367788888873 222221111000 0000000
Q ss_pred ccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCC
Q 043646 345 LEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN 424 (625)
Q Consensus 345 ~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~ 424 (625)
...+ ..--.|+..++.+--+-+... ...|...-.+-..-+++|+.++|+..-.+-..+.. ..--.-|++.-.
T Consensus 786 ~gsV-saaP~Gsa~ILpISwaYikmM--G~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~---~~vaHEFIlD~r-- 857 (1001)
T KOG2040|consen 786 VGSV-SAAPWGSALILPISWAYIKMM--GSGGLKDASKIAILNANYMAKRLESHYKILFRGEN---GLVAHEFILDLR-- 857 (1001)
T ss_pred ccce-eccCCCcceeehhHHHHHHHh--cccccchhhHHHhhhhHHHHHHHhhccceeEecCC---cceeeeeeeech--
Confidence 0000 000123333333322223322 33455554555566799999999874222222221 111122333111
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
..+...++...+|+++|.| +|....+-+++. +|.+-|-+.-.-
T Consensus 858 ------~fK~~agieavDvAKRL~D-YgFHaPTmswPV------------------------------~gtLMIEPTESE 900 (1001)
T KOG2040|consen 858 ------PFKKTAGIEAVDVAKRLMD-YGFHAPTMSWPV------------------------------AGTLMIEPTESE 900 (1001)
T ss_pred ------hhccccCCcHHHHHHHHHh-ccCCCCcccccc------------------------------CCceEeccCccc
Confidence 0123356888899999976 899887665543 488899998888
Q ss_pred CHHHHHHHHHHHHHHHHhh
Q 043646 505 SNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 505 t~edid~ll~aL~~~~~~~ 523 (625)
+.+|+|+|++++-.+-++.
T Consensus 901 ~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 901 DKAELDRFCDALISIREEI 919 (1001)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876554
No 331
>PRK07482 hypothetical protein; Provisional
Probab=99.54 E-value=1.2e-11 Score=135.13 Aligned_cols=366 Identities=15% Similarity=0.076 Sum_probs=197.7
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ .|+|..++ |...+.|.+++.+++.... ..+.. .....+...++.+.|++.+..+-+
T Consensus 41 G~~l~D~dG~---~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~-~~~~~----~~~~~~~~~~lAe~L~~~~p~~~~ 112 (461)
T PRK07482 41 GIRITDAQGR---RYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELA-YYHTY----VGHGTEASITLSKRIIDRAPAGMS 112 (461)
T ss_pred eeEEEECCCC---EEEEcccchhhhcCCCCCHHHHHHHHHHHHhcC-ccccc----cccCCHHHHHHHHHHHHhCCCCcC
Confidence 4555555553 48887655 5678899999999886431 01110 001234556677778887754333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhHHHHHHcC------------CeEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNLLSWRQSL------------AEVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~~~G------------~~vv 206 (625)
.+.|+.||+++.-.++-.++.... . .-.++ +..|+.- ..+|.....+....| ..+.
T Consensus 113 -~v~f~~sGSEAve~AlKlAr~~~~-----~----~g~~~-r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~ 181 (461)
T PRK07482 113 -KVYYGLSGSDANETQIKLVWYYNN-----V----LGRPE-KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVL 181 (461)
T ss_pred -EEEEeCchHHHHHHHHHHHHHHHH-----h----cCCCC-CceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCE
Confidence 789998888883333322221000 0 00122 2245554 445543332222111 1222
Q ss_pred EEecCC--C----C-------CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEe
Q 043646 207 EIGLDD--N----G-------LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFD 269 (625)
Q Consensus 207 ~v~~~~--~----~-------~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD 269 (625)
.++... . + .-++++|++.+.+ ...+++.+|++..+....|.+.| +++|.++|++||+++|+|
T Consensus 182 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~D 260 (461)
T PRK07482 182 HTEAPHYYRRADAGMSEEQFSAYCADELEELILA-EGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIAD 260 (461)
T ss_pred EcCCCccccccccCCCHHHHHHHHHHHHHHHHHh-cCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEe
Confidence 332221 1 0 0145677777752 11246789999988888888855 789999999999999999
Q ss_pred ccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccc
Q 043646 270 FAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYL 345 (625)
Q Consensus 270 ~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~ 345 (625)
+++. +|-.. ......+. .+|+++++ |.+++.. .+|++++++++.. .+.......+.+.
T Consensus 261 EV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~--~~~~~~~~~~~~~------------- 322 (461)
T PRK07482 261 EVVTGFGRLGSMFGSDHYGI-EPDLITVA--KGLTSAYAPLSGSIVGEKVWD--VLEQGSDEHGAIG------------- 322 (461)
T ss_pred ccccCCCcCcchhhHHhcCC-CCCEEEEc--cccccCccccceeeecHHHHH--HHhcccccCCccc-------------
Confidence 9965 32211 11111111 57999987 9997643 4688888887732 1111000000000
Q ss_pred cchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC----CCCcEEEeCCCCCCCcceEEEEecc
Q 043646 346 EDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL----PNQNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 346 ~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~----~l~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
...-..|.|-.+++..+.++.+ +. +.+.++.+.+.+++.+.|. +.|.+.-+. .++.++.+.+..
T Consensus 323 ---h~~T~~gnpl~~Aaa~a~L~~~--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vr----G~Glm~giel~~ 390 (461)
T PRK07482 323 ---HGWTYSGHPICAAAALANLDIL--ER---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVR----GVGMLAAVEFVA 390 (461)
T ss_pred ---cCCCCCcCHHHHHHHHHHHHHH--Hh---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe----eceeEEEEEecc
Confidence 0000123344444444555555 22 2345555666666666664 334332111 133444444432
Q ss_pred CCCCCCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 422 TTNSSPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
+.. ...+.+ ...+...+.+ +||.++++. ....+
T Consensus 391 ~~~---------~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~~--------------------------------~~~~i 428 (461)
T PRK07482 391 DRD---------DRTPFDPALKIGPQVSAAALE-RGVIARAMP--------------------------------HGDIL 428 (461)
T ss_pred CCC---------cCCCCChhhHHHHHHHHHHHH-CCcEEecCC--------------------------------CCCEE
Confidence 110 001111 2356666655 798876321 02679
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 497 RITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
|+.+++.+|++|+++++++|++.+.+.
T Consensus 429 ~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 429 GFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 332
>PRK07678 aminotransferase; Validated
Probab=99.54 E-value=3.4e-11 Score=131.48 Aligned_cols=367 Identities=11% Similarity=0.078 Sum_probs=199.6
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..| .-|+|..+ .|...+.|.+++.+++......+.. ...+...++.+.|+++++..
T Consensus 38 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-------~~~~~~~~lae~l~~~~~~~-- 105 (451)
T PRK07678 38 GAWVTDIQG---NRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLT-------QSHEPAIKLAEKLNEWLGGE-- 105 (451)
T ss_pred eeEEEeCCC---CEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccc-------cCCHHHHHHHHHHHHhCCCC--
Confidence 345555545 34888643 3667889999999888643211110 11234456777888887643
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~ 207 (625)
+.+.|+.||+.+.-.++-.++.... . .=+++...+|.....+|.....++...|. .+..
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~-----~----~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 176 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHA-----Q----KGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLH 176 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHH-----h----cCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEE
Confidence 3789998888874443333321000 0 00123322333444555554433332221 2233
Q ss_pred EecCCCCCC---------C---HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEecc
Q 043646 208 IGLDDNGLL---------D---IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 208 v~~~~~~~l---------d---~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A 271 (625)
++....... | ++.+++.+.. ...+++.+|++..+....|.+.| +++|.++|++||+++|+|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV 255 (451)
T PRK07678 177 VPPPDCYRMPGIESEDIYDLECVKEIDRVMTW-ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEV 255 (451)
T ss_pred eCCCccccccccCChHHHHHHHHHHHHHHHHh-cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh
Confidence 332211111 1 2235556642 12246889999988888888866 78999999999999999999
Q ss_pred Cc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccc
Q 043646 272 AS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLED 347 (625)
Q Consensus 272 ~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~ 347 (625)
+. +|-.. ......+. .+|+++++ |.+|+. ..+|++++++++.. .+.+... .+.+.
T Consensus 256 ~tGfGRtG~~~~~~~~gv-~PDivt~g--K~lggG~~Pi~av~~~~~i~~--~~~~~~~-~~~~~--------------- 314 (451)
T PRK07678 256 ICGFGRTGKAFGFMNYGV-KPDIITMA--KGITSAYLPLSATAVKKEIYE--AFKGKGE-YEHFR--------------- 314 (451)
T ss_pred hhcCCcCchhHHHHhcCC-CCCEEEee--cccccCCcceeEEEEcHHHHH--HHhccCc-ccccc---------------
Confidence 74 43321 11122222 57999886 999764 24799999988732 2221100 00000
Q ss_pred hhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC----CCCcEEEeCCCCCCCcceEEEEeccCC
Q 043646 348 IEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL----PNQNIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 348 ~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~----~l~gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
...-..|.|-.++...++++.+. .. .+.++.+++.+++.+.|. +.+.+.-+ ..++.++.+.+..+.
T Consensus 315 -h~~T~~gnp~~~aaa~a~l~~l~--~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v----rg~Gl~~~i~~~~~~ 384 (451)
T PRK07678 315 -HVNTFGGNPAACALALKNLEIME--NE---NLIERSAQLGELLLEQLKEELGEHPLVGDI----RGKGLLVGIELVNDK 384 (451)
T ss_pred -cCCCCCcCHHHHHHHHHHHHHHH--hC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE----EeeceEEEEEEecCC
Confidence 00001233444444455666552 22 345566666666666654 33332111 123455555553321
Q ss_pred CCCCccccccCCCCCC---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 424 NSSPENMKIERNKPLH---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 424 ~~~~~~~~~~~~~~l~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
. ...+.+ ...+...|.+ +||.+.+.. ...+ . ....+|+++
T Consensus 385 ~---------~~~~~~~~~a~~i~~~l~~-~Gv~~~~~g-~~v~-~-------------------------~~~~lrl~P 427 (451)
T PRK07678 385 E---------TKEPADNDKVASVVAACKE-KGLIIGKNG-DTVA-G-------------------------YNNVLTLSP 427 (451)
T ss_pred c---------ccCcCchHHHHHHHHHHHH-CCcEEeecC-cccc-C-------------------------CCCEEEEEC
Confidence 0 000101 2456666755 799886311 0000 0 136799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh
Q 043646 501 PYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 501 ~~~~t~edid~ll~aL~~~~~~ 522 (625)
++.+|++|||++++++++++..
T Consensus 428 pl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 428 PLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred CCcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998864
No 333
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=5.6e-12 Score=122.81 Aligned_cols=322 Identities=16% Similarity=0.117 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhH
Q 043646 118 RMTKMVHEASNYIKRCLGGGQ-ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNL 195 (625)
Q Consensus 118 ~~~~~~~~~~~~ia~~~g~~~-~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~ 195 (625)
+...+.+.+...+.+-+|..- +++|.+| +|+..+...+...|+-+. ..|+...|+.+ .++|..+.
T Consensus 75 G~~~li~ala~~l~~~ygwnit~~NIalT-nGSQs~fFYlfNlF~G~~------------sdG~~k~illPLaPeYiGY~ 141 (417)
T COG3977 75 GKAVLIDALAKMLRREYGWNITAQNIALT-NGSQSAFFYLFNLFAGRR------------SDGTEKKILLPLAPEYIGYA 141 (417)
T ss_pred chhHHHHHHHHHHHHHhCCCCccceeeec-CCccchHHHHHHHhcCcc------------CCCcceeEeeccChhhcccc
Confidence 345677888888888888763 3389999 899999998888886332 33444345554 56666654
Q ss_pred HHHHHcCCeEEE----EecCC----CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCC
Q 043646 196 LSWRQSLAEVVE----IGLDD----NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGG 264 (625)
Q Consensus 196 ~~~~~~G~~vv~----v~~~~----~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~ 264 (625)
.+...-. -.|. +.+.+ ..++|.++|.- . +.+-+|+++-|+||||.+.- +..|.+++++||+
T Consensus 142 d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i--~-----e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~gi 213 (417)
T COG3977 142 DAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI--G-----ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGI 213 (417)
T ss_pred ccccCcc-ceeeccCCcccccccceeeccCHHHccc--c-----cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCC
Confidence 2211100 0111 11112 24788887752 2 57899999999999999843 6677889999999
Q ss_pred EEEEeccCcCCCccccCCCCCC-CCC-cEEEEcCCCCCCCCCC-ceEEEEeccccc-cCCCCCcccCCceEEeecccccc
Q 043646 265 FACFDFAASGPYVKINLRSRNI-DGY-DAIFLATHKFLGGPGT-PGILLISKALYQ-LGSSPPSTCGGGTVNYVNAFDEK 340 (625)
Q Consensus 265 ~vivD~A~~~g~~~id~~~~~~-~~~-D~v~~S~hK~lggp~g-~G~l~v~~~~~~-l~~~~p~~~ggg~v~~~~~~~~~ 340 (625)
.+++|.|++++.-.+-+.+... .+. -+.|+|.+|. |-|+. ||+++.++++.+ +..+. +.++..
T Consensus 214 PliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIane~viqaitnmn------~iisLa------ 280 (417)
T COG3977 214 PLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIANEKVIQAITNMN------GIISLA------ 280 (417)
T ss_pred cEEEecccCCCCCceecccccccCCCCEEEEeehhhc-CCCCcceeEEEccHHHHHHHHhcc------ceeeec------
Confidence 9999999998776554433211 122 3678899996 66764 999999988833 11110 000000
Q ss_pred ccccccchhhhhcCCChhHHHHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEe
Q 043646 341 DTLYLEDIEERENGGTPQIVQMIRAALAFW-VKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419 (625)
Q Consensus 341 ~~~~~~~~~~~~~~gt~~~~~~~~aal~~~-~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~ 419 (625)
..+ .| |.+.+-+-..-++. +.++.=..-.+.+.+.-...+++.|-+. -+.+..| .++|+.+.-
T Consensus 281 --------p~~--~G-~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~iHkp----EGAIFlWLW 344 (417)
T COG3977 281 --------PGR--MG-PAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLIHKP----EGAIFLWLW 344 (417)
T ss_pred --------CCC--cc-HHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceeeecC----Ccceeehhh
Confidence 000 01 12211110000110 0011101111223333333444444433 3455555 468888887
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
+.+ .+++..++.++|.+ .|+.+.+|..|-. +++.+... ...++|++
T Consensus 345 f~d-------------LPItt~~LYq~LKa-~Gvl~VPG~~FFp-------Gl~~ewpH-------------~hqC~Rmn 390 (417)
T COG3977 345 FKD-------------LPITTEELYQRLKA-RGVLMVPGHYFFP-------GLDKEWPH-------------THQCMRMN 390 (417)
T ss_pred hcc-------------CCCCHHHHHHHHHh-CeEEEecccccCC-------CCCCCCCC-------------ccceEEEe
Confidence 754 46788999999954 7999999986542 23222111 25899999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 500 FPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
+. -+++.++.-+++|.+-++..+.
T Consensus 391 ~~--~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 391 YV--PEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred cC--CCHHHHHHHHHHHHHHHHHHHh
Confidence 74 3789999999999887776543
No 334
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.53 E-value=3e-11 Score=131.11 Aligned_cols=348 Identities=18% Similarity=0.109 Sum_probs=193.2
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC-
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ- 138 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~- 138 (625)
+..+.+..|+ -|+|..+ .|..++.|.+++.+++... ...+.. ........++.+++++.+..+.
T Consensus 30 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~~-----~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 30 GSWLYDEDGK---EYIDFFAGAGALNYGHNNPVLKQALIDYLQRD-GITHGL-----DMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred cCEEEeCCCC---EeeecccchhhccCCCCCHHHHHHHHHHHHhc-cccccc-----ccCcHHHHHHHHHHHHhhcCCcC
Confidence 3445555553 4888633 3667899999999988531 111111 0112344556677777653221
Q ss_pred -CCcEEEe-CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------Ce
Q 043646 139 -ADAIIFC-GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AE 204 (625)
Q Consensus 139 -~~~vift-~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~ 204 (625)
++.+.|+ .||+.+.-.++-.++. . +|.+.+|......|.....++...| ..
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~ 165 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARK--------------V-TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNN 165 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHH--------------h-cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCC
Confidence 2246664 5788874433333321 1 2322234444455554443333211 13
Q ss_pred EEEEecCCCC---CCCHHHHHHHHHHhhhC-CCCeEEEEecccCcccccc----CHHHHHHHHHHcCCEEEEeccCcC-C
Q 043646 205 VVEIGLDDNG---LLDIEALRSQLELYKAA-KRPMLGSFSACSNVTGIYS----DTRSIARLLHQYGGFACFDFAASG-P 275 (625)
Q Consensus 205 vv~v~~~~~~---~ld~~~L~~~l~~~~~~-~~~~lv~~~~~~n~TG~~~----~l~~I~~la~~~g~~vivD~A~~~-g 275 (625)
+..+|..... .-|+++|++.+.+.... +++.+|++..+....|.+. .+++|.++|++||+++|+|++++. |
T Consensus 166 ~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 245 (425)
T PRK09264 166 VTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCG 245 (425)
T ss_pred eEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCc
Confidence 4455543210 12678888888642111 3578999999998888764 389999999999999999999862 2
Q ss_pred Cc----cccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 276 YV----KINLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 276 ~~----~id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
-. ..+.... .+|+++++ |.+++.+ .+|++++++++. ...+... +++
T Consensus 246 rtG~~~~~~~~~v---~PDi~t~~--K~l~~~G~pigav~~~~~i~---~~~~~~~-~~T-------------------- 296 (425)
T PRK09264 246 RTGTFFSFERAGI---TPDIVTLS--KSISGYGLPMALVLIKPELD---VWKPGEH-NGT-------------------- 296 (425)
T ss_pred cccHHHHHhhcCC---CCCEEEec--cccCCCccceEEEEEchhhh---ccCCCcc-CCC--------------------
Confidence 11 1111122 56888775 9997422 369999987751 1211110 001
Q ss_pred hhcCCChhHHHHHHHHH-HHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCCCC
Q 043646 351 RENGGTPQIVQMIRAAL-AFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTTNS 425 (625)
Q Consensus 351 ~~~~gt~~~~~~~~aal-~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~~~ 425 (625)
..|.|.......+++ .++ + .+.+.++.+.+.+++.+.|.++ |.+ + .+. ...+.++.+.+.+..
T Consensus 297 --~~gnp~~~aaa~a~l~~~~--~---~~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~-~~v-rg~Gl~~~i~l~~~~-- 364 (425)
T PRK09264 297 --FRGNNLAFVTATAALEEYW--S---DDAFEKEVKAKGELVRERLEEIAAKYPGL-G-AEV-RGRGMMQGIDFGDGE-- 364 (425)
T ss_pred --CCCCHHHHHHHHHHHHHHH--h---hhHHHHHHHHHHHHHHHHHHHHHHhCCCc-e-ecc-eecccEEEEEecChH--
Confidence 013332222223444 232 1 2356667777777777766543 322 1 111 112333333332210
Q ss_pred CCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCC
Q 043646 426 SPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMS 505 (625)
Q Consensus 426 ~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t 505 (625)
....+.+.+.+ .||.+.+... ....+|+++++.+|
T Consensus 365 -------------~~~~l~~~~~~-~Gv~~~~~~~-------------------------------~~~~lr~~p~l~~t 399 (425)
T PRK09264 365 -------------LAGKIAAEAFE-NGLIIETSGP-------------------------------EDEVVKLLPPLTID 399 (425)
T ss_pred -------------HHHHHHHHHHH-CCCEEeccCC-------------------------------CCCEEEEeCCCCCC
Confidence 13456777755 6998864211 13679999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 043646 506 NEEFEFILAALEFIAAYG 523 (625)
Q Consensus 506 ~edid~ll~aL~~~~~~~ 523 (625)
++|+++++++|++++.+.
T Consensus 400 ~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 400 EEELEEGLDILEEAVAEV 417 (425)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988764
No 335
>PRK07036 hypothetical protein; Provisional
Probab=99.53 E-value=1.3e-11 Score=134.99 Aligned_cols=358 Identities=14% Similarity=0.062 Sum_probs=196.8
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ .|+|..+. |...+.|.+++.+++......... +....+...++.++|.+.+...-+
T Consensus 42 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~-----~~~~~~~~~~lae~L~~~~p~~~~ 113 (466)
T PRK07036 42 GIYVTDADGR---RYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF-----GDMTNAPAAELAAKLAELAPGDLN 113 (466)
T ss_pred eeEEEECCCC---EEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc-----cccCCHHHHHHHHHHHHhCCCCcC
Confidence 3445555453 48887444 567889999999888542111110 001233455677777777654333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcCC------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSLA------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G~------------~vv 206 (625)
.|.|+.||+++.-.++-.++.... .+ -.++.. .|+. ...+|.....++...|- .+.
T Consensus 114 -~v~f~~sGseAve~AlklAr~~~~-----~~----g~t~r~-~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~ 182 (466)
T PRK07036 114 -HVFLTTGGSTAVDSALRFVHYYFN-----VR----GRPAKK-HIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVH 182 (466)
T ss_pred -EEEEeCCchHHHHHHHHHHHHHHH-----hc----CCCCcc-EEEEEcCccCCccHhhhcccCCCcccccccCCCCCcE
Confidence 799998888873333322221000 00 012222 3444 44555544333322211 133
Q ss_pred EEecCCC----CCCC--------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 207 EIGLDDN----GLLD--------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 207 ~v~~~~~----~~ld--------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
.++.... .... ++.+++.+.. ...+++.+|++..+....|.+.| +++|.++|++||+++|+|+
T Consensus 183 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DE 261 (466)
T PRK07036 183 HLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS-LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDE 261 (466)
T ss_pred EecCCcccccccCCChHHHHHHHHHHHHHHHHH-cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 3332210 0111 2345555542 12356889999999888899887 8999999999999999999
Q ss_pred cCc-CCCcc--ccCC-CCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc------ccCCceEEeeccccc
Q 043646 271 AAS-GPYVK--INLR-SRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS------TCGGGTVNYVNAFDE 339 (625)
Q Consensus 271 A~~-~g~~~--id~~-~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~------~~ggg~v~~~~~~~~ 339 (625)
++. +|-.. .... .++. .+|+++++ |.+++.. .+|++++++++.+ .+.+. +..++|
T Consensus 262 V~tGfGRtG~~~~~~~~~gv-~PDivt~g--K~l~gG~~Pi~av~~~~~i~~--~~~~~~~~~~~~~~~~T--------- 327 (466)
T PRK07036 262 VVTGFGRLGHFFASEAVFGI-QPDIITFA--KGLTSGYQPLGAVIISERLLD--VISGPNAKGNVFTHGFT--------- 327 (466)
T ss_pred chhCCCcCchhhhhhhhcCC-CCCEEEEc--cccccCccccEEEEEcHHHHH--HHhcccCcCcccccCCC---------
Confidence 974 43221 1121 1112 57998886 9997642 4788899988732 22110 011111
Q ss_pred cccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC---CcEEEeCCCCCCCcceEE
Q 043646 340 KDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN---QNIQVLGNTSVKRQAILS 416 (625)
Q Consensus 340 ~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l---~gv~v~~~~~~~~~~i~~ 416 (625)
..|.|-.+++..+.++.+. . +.+.++.+.+.+++.+.|..+ |.+.-+ ...+..+.
T Consensus 328 -------------~~gnpl~~aaa~a~Le~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~v----rG~Gl~~~ 385 (466)
T PRK07036 328 -------------YSGHPVACAAALKNIEIME--R---EGLCEHVREVGPYFEERLASLRELPLVGDV----RGDHLMAC 385 (466)
T ss_pred -------------CCCCHHHHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHhccCCCEEEE----EeeceEEE
Confidence 1233444444445555552 2 245566666677777666543 322111 11334455
Q ss_pred EEeccCCCCCCccccccCCCCC--C---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCC
Q 043646 417 FLVYSTTNSSPENMKIERNKPL--H---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGV 491 (625)
Q Consensus 417 f~~~~~~~~~~~~~~~~~~~~l--~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~ 491 (625)
+.+..+.. ..... + ...+.+.+.+ +||.+++.
T Consensus 386 ve~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~--------------------------------- 422 (466)
T PRK07036 386 VECVADKG---------SKALLPEDIAIGQRIDRHCQE-RGLLVRPL--------------------------------- 422 (466)
T ss_pred EEEccCcc---------ccCCCCchhHHHHHHHHHHHH-CCcEEeec---------------------------------
Confidence 44432210 00011 1 2346666654 69888631
Q ss_pred CCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 492 KPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 492 ~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.+.+|+++++.+|++|+|++++++.+++...
T Consensus 423 -~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 423 -EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred -CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1568999999999999999999999988775
No 336
>PRK05965 hypothetical protein; Provisional
Probab=99.53 E-value=1.5e-11 Score=134.39 Aligned_cols=363 Identities=13% Similarity=0.038 Sum_probs=200.5
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..++ |...+.|.+++.+++......... + ....+...++.++|++.+..+.+
T Consensus 37 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~--~---~~~~~~~~~lae~L~~~~p~~~~ 108 (459)
T PRK05965 37 GATLTDASG---HQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGY--F---HFGSEPAIRLAAKLAERAPGSLN 108 (459)
T ss_pred EeEEEECCC---CEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccc--c---ccCCHHHHHHHHHHHhhCCCCcC
Confidence 345555555 358887554 456789999999988643111110 0 01123445677777777653333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~ 207 (625)
.+.|+.+|+++.-.++-.++.... ..=+++...+|.....+|.....+....|. .+..
T Consensus 109 -~v~f~~sGSEAve~AlKlAr~~~~---------~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~ 178 (459)
T PRK05965 109 -HVYFTLGGSDAVDSAVRFIRHYWN---------ATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHK 178 (459)
T ss_pred -EEEEeCChhHHHHHHHHHHHHHHH---------hcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEE
Confidence 799987888883333322221000 000122222344444555554332222111 1233
Q ss_pred EecCCCC----CCC--------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEecc
Q 043646 208 IGLDDNG----LLD--------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 208 v~~~~~~----~ld--------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A 271 (625)
++..... .-| ++++++.+... ..+++.+|++..+....|.+.| +++|.++|++||+++|+|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV 257 (459)
T PRK05965 179 IPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL-GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEV 257 (459)
T ss_pred cCCCcccccccCCChHHHHHHHHHHHHHHHHhc-CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 3322100 113 25677777531 1146789999988888888765 78999999999999999999
Q ss_pred CcC-CCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc------ccCCceEEeeccccccc
Q 043646 272 ASG-PYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS------TCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 272 ~~~-g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~------~~ggg~v~~~~~~~~~~ 341 (625)
+.. |-.. ......+. .+|+++++ |.+++.. .+|++++++++.. .+.+. ...++|
T Consensus 258 ~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~--~~~~~~~~~~~~~h~~T----------- 321 (459)
T PRK05965 258 ITGFGRTGPLFACEAEGV-VPDLMTVA--KGLTSGYVPMGAVLMSDHVYQ--GIADGAGAAAPVGHGYT----------- 321 (459)
T ss_pred hccCccCchhhhHhhcCC-CCCeEEec--hhhccCCcceeEEEEcHHHHH--HHhccccccccccccCC-----------
Confidence 653 2211 11111112 57999997 9997653 5799999988832 22110 001111
Q ss_pred cccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEecc
Q 043646 342 TLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
..|.|-.+++..+.++++ + .+.+.++.+.+.+++.+.|+++....+++.. ...+.++.+.+..
T Consensus 322 -----------~~gnpl~~Aaa~a~L~~l--~---~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~gie~~~ 384 (459)
T PRK05965 322 -----------YSAHPVSAAVGLEVLRLY--H---EGGLLANGQKAGPRFAAGLDALRAHPLVGDV-RGRGLLGALELVA 384 (459)
T ss_pred -----------CCCCHHHHHHHHHHHHHH--H---hccHHHHHHHHHHHHHHHHHhhccCCCEEEE-eecceEEEEEEec
Confidence 123343344444555555 2 2345667777777777777654211111111 1234445554432
Q ss_pred CCCCCCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 422 TTNSSPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
+.. ...+.. ...+.+.+.+ +||.+++ + ....+
T Consensus 385 ~~~---------~~~~~~~~~~~~~~i~~~~~~-~Gll~~~---~------------------------------g~~~i 421 (459)
T PRK05965 385 DKA---------TKTPFDAALDPADRIFDRAYA-NGLVFRA---F------------------------------GDGVL 421 (459)
T ss_pred ccc---------ccCCCCchhHHHHHHHHHHHh-CCeEEEe---c------------------------------CCcEE
Confidence 210 000100 2346666654 7998862 1 12679
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 497 RITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
|+.+++.+|++|+++++++|.+++.+.
T Consensus 422 ~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 422 GFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred EEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998764
No 337
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=1e-11 Score=135.41 Aligned_cols=363 Identities=14% Similarity=0.116 Sum_probs=198.9
Q ss_pred CCCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC
Q 043646 64 GNDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG 137 (625)
Q Consensus 64 ~~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~ 137 (625)
+.+..+.+..|+ -|+|..+ .|...+.|.+++.+++.......... ...+...++.+.|++.++..
T Consensus 43 a~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~------~~~~~~~~lAe~L~~~~p~~ 113 (453)
T PRK06943 43 GEGAWLYDRDGR---RYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAG------CTHEPAIELAERLAALTGGT 113 (453)
T ss_pred cccCEEEeCCCC---EEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccc------cCCHHHHHHHHHHHHhCCCC
Confidence 334556666553 4888643 36678999999999886431111100 01234456777777877643
Q ss_pred CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eE
Q 043646 138 QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EV 205 (625)
Q Consensus 138 ~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~v 205 (625)
-+ .+.|+.+|+.+.-.++-.++... +.+ -.++...+|.....+|.....++...|- .+
T Consensus 114 ~~-~v~f~~sGseAve~AlKlA~~~~-----~~r----g~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~ 183 (453)
T PRK06943 114 LG-HAFFASDGASAVEIALKMSFHAW-----RNR----GRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHA 183 (453)
T ss_pred CC-EEEEeCCCHHHHHHHHHHHHHHH-----HHh----CCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCC
Confidence 33 79999888887333332221100 000 0123222344444555544333322221 12
Q ss_pred EEEecCCC-C-----------CCCHHHHHHHHHHhhhCCCCeEEEEec-ccCccccccC----HHHHHHHHHHcCCEEEE
Q 043646 206 VEIGLDDN-G-----------LLDIEALRSQLELYKAAKRPMLGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACF 268 (625)
Q Consensus 206 v~v~~~~~-~-----------~ld~~~L~~~l~~~~~~~~~~lv~~~~-~~n~TG~~~~----l~~I~~la~~~g~~viv 268 (625)
..++.... + .-+++.+++.+.. ..+++.+|++.. +....|.+.| +++|.++|++||+++|+
T Consensus 184 ~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~ 261 (453)
T PRK06943 184 HVVASPDARGARPGETAADVAARALADVRRLFAE--RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIA 261 (453)
T ss_pred EEECCCCccccccCCCHHHHHHHHHHHHHHHHHh--CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEe
Confidence 33432211 0 0134677777763 235688999988 4777788755 78999999999999999
Q ss_pred eccCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeecccccccccc
Q 043646 269 DFAAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY 344 (625)
Q Consensus 269 D~A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (625)
|+++. +|-... ..+..+. .+|+++++ |.+++.. .+|++++++++.. .+.+....+.. .
T Consensus 262 DEV~TG~GRtG~~fa~~~~gv-~PDivt~g--Kgl~gG~~Pi~av~~~~ei~~--~~~~~~~~~~~-~------------ 323 (453)
T PRK06943 262 DEIAVGCGRTGTFFACEQAGV-WPDFLCLS--KGISGGYLPLSLVLSRDAIFA--AFYDDDVTRGF-L------------ 323 (453)
T ss_pred echhhCCCCCcchhHHHhCCC-CCCeEeee--hhhccCcccceEEEEcHHHHH--hhcccCccCCc-c------------
Confidence 99965 332211 1111111 57999997 9887652 4789999988732 22110000000 0
Q ss_pred ccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC---CcEEEeCCCCCCCcceEEEEecc
Q 043646 345 LEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN---QNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 345 ~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l---~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
...-..|.|-.++...+.++.+ +. +.+.++..++.+++.+.|+++ +.+.-+ ..++..+.+.+..
T Consensus 324 ----~~~T~~gnpl~~aaa~a~L~~i--~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~v----rG~Gl~~gvel~~ 390 (453)
T PRK06943 324 ----HSHSYTGNPLACRAALATLDLF--AE---DDVLARNARKSARLRAALAPLAAHPQVRHL----RQRGTIFAFDVAL 390 (453)
T ss_pred ----CCCCCCCCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeE----eccccEEEEEEcc
Confidence 0000123343344444555555 22 234556666666666666543 433211 1234455555432
Q ss_pred CCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecC
Q 043646 422 TTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFP 501 (625)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~ 501 (625)
+.+. ...+ ...+.+.+.+ +||.+.+. ...+|++++
T Consensus 391 ~~~~---------~~~~-~~~i~~~~~~-~Gll~~~~----------------------------------g~~l~~~Pp 425 (453)
T PRK06943 391 DGDA---------ARTF-SRRFFEAALE-RELLLRPI----------------------------------GTTVYLMPP 425 (453)
T ss_pred CCCc---------chHH-HHHHHHHHHH-CCcEEEec----------------------------------CCEEEEeCC
Confidence 1100 0000 2356666655 79988631 145999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhh
Q 043646 502 YYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 502 ~~~t~edid~ll~aL~~~~~~~ 523 (625)
+.+|++|+|+++++|++.+.+.
T Consensus 426 l~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 426 YVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988763
No 338
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.52 E-value=1.7e-11 Score=133.31 Aligned_cols=343 Identities=12% Similarity=0.075 Sum_probs=184.9
Q ss_pred eEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 043646 78 LTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTA 151 (625)
Q Consensus 78 ~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtta 151 (625)
..|+|..+. |-.++.+.+++.+++.... ...... . ......++.+.+++..+.+..+.++|+.+|+.+
T Consensus 41 ~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~-~~~~~~--~---~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea 114 (425)
T PRK08088 41 REYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV--L---AYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEA 114 (425)
T ss_pred CEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC-Cccccc--c---CCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHH
Confidence 347886443 5568899999988885431 111100 0 012233566777777765432378888789985
Q ss_pred ---HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEEE--EecCCC
Q 043646 152 ---AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVVE--IGLDDN 213 (625)
Q Consensus 152 ---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv~--v~~~~~ 213 (625)
+|+++.. . .++ .+ +|.+.+..|..........+- .+.. +|.+.+
T Consensus 115 ~e~Alklar~-~---------------~~r-~~-iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 176 (425)
T PRK08088 115 VENAVKIARA-A---------------TKR-SG-VIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH 176 (425)
T ss_pred HHHHHHHHHH-H---------------hCC-Ce-EEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc
Confidence 5554321 1 122 22 566666666665444332221 0111 222222
Q ss_pred CCCC----HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCcc--ccCC
Q 043646 214 GLLD----IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVK--INLR 282 (625)
Q Consensus 214 ~~ld----~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~~--id~~ 282 (625)
+ .+ ++.|++++.+..+.++..+|++.......|.+.+ +++|.++|++||+++|+|++++. +... ..+.
T Consensus 177 ~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~ 255 (425)
T PRK08088 177 G-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAME 255 (425)
T ss_pred C-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHh
Confidence 1 22 4568887752112246788888888877787766 89999999999999999999773 2211 0111
Q ss_pred CCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHH-
Q 043646 283 SRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQ- 361 (625)
Q Consensus 283 ~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~- 361 (625)
..+ ..+|+ .++.|.+++...+|+++.++++. +.+..... ....+.+++.+
T Consensus 256 ~~~-~~pdi--~s~sK~l~~G~rig~v~~~~~~~--~~~~~~~~------------------------~~t~~~~~~~~~ 306 (425)
T PRK08088 256 QMG-VAADL--TTFAKSIAGGFPLAGVTGRAEVM--DAIAPGGL------------------------GGTYAGNPIACA 306 (425)
T ss_pred hcC-CCCCE--EEEeccccCCCcceeeEecHHHH--hhcCCCCC------------------------CCCCCcCHHHHH
Confidence 111 13564 45569997444589999988873 33321110 01112222222
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC----CCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC
Q 043646 362 MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL----PNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP 437 (625)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~----~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~ 437 (625)
++.+.++.. ..+.+.++.+.+.+++.+.|. ..|.+.-+.. .+..+.+.+..+.+.. ....
T Consensus 307 a~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g----~G~~~~l~l~~~~~~~-------~p~~ 370 (425)
T PRK08088 307 AALAVLKVF-----EQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG----LGAMIAIELFEDGDHS-------KPNA 370 (425)
T ss_pred HHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec----cceEEEEEEecCCCCC-------CCCH
Confidence 222333322 122344444444444444443 3444322211 2334333332211000 0001
Q ss_pred CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 438 LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 438 l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
.....+.+.+.+ .||.+.++.. .++.+|++++..++++|++..+++|+
T Consensus 371 ~~~~~l~~~~~~-~Gv~~~~~~~-------------------------------~~~~iRl~~~~~~t~~ei~~~i~~l~ 418 (425)
T PRK08088 371 KLTAQIVARARD-KGLILLSCGP-------------------------------YYNVLRILVPLTIEDAQIRQGLEIIA 418 (425)
T ss_pred HHHHHHHHHHHh-CCCEEecCCC-------------------------------CCCEEEEECCCCcCHHHHHHHHHHHH
Confidence 124567777755 6988764211 13779999999999999999999999
Q ss_pred HHHHh
Q 043646 518 FIAAY 522 (625)
Q Consensus 518 ~~~~~ 522 (625)
+++..
T Consensus 419 ~~l~~ 423 (425)
T PRK08088 419 QCFDE 423 (425)
T ss_pred HHHHh
Confidence 98764
No 339
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.51 E-value=1.2e-11 Score=135.08 Aligned_cols=368 Identities=13% Similarity=0.061 Sum_probs=199.9
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..+ .|..++.|.+++.+++......... . ...+...++.+.|++++...-+
T Consensus 47 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-~-----~~~~~~~~lae~L~~~~p~~~~ 117 (460)
T PRK06916 47 GRKLYDVNG---NEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL-G-----LANVPSILLAEKLIEVVPEGLK 117 (460)
T ss_pred ccEEEeCCC---CEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc-c-----cCCHHHHHHHHHHHHhCCCCCC
Confidence 445555545 34888644 3677899999999988653211110 0 1123445677888888753333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~ 207 (625)
.+.|+.||+++.-.++-.++.... . . =.++.+.+|.....+|.....++...|. .+..
T Consensus 118 -~v~f~~SGseAve~AlklAr~~~~-----~---~-g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~ 187 (460)
T PRK06916 118 -KVFYSDSGATAVEIAIKMAFQYWQ-----N---K-GKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIK 187 (460)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHHH-----h---c-CCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEE
Confidence 799998888874333322221000 0 0 0133332444455555544433332221 1233
Q ss_pred EecCCC------C------CCCHHHHHHHHHHhhhCCCCeEEEEec-ccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 208 IGLDDN------G------LLDIEALRSQLELYKAAKRPMLGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 208 v~~~~~------~------~ld~~~L~~~l~~~~~~~~~~lv~~~~-~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
+|.... + .-+++.+++.+.. ..+++.+|++.. +....|.+.| +++|.++|++||+++|+|+
T Consensus 188 ~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DE 265 (460)
T PRK06916 188 MPYPYTYRSPYGNDKAEIVKKHLEELEELLKE--KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDE 265 (460)
T ss_pred eCCCcccccccCCChHHHHHHHHHHHHHHHHh--CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeec
Confidence 432210 0 0135667777752 235678888887 5777788754 7899999999999999999
Q ss_pred cCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 271 AAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 271 A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
++. +|-... -....+. .+|+++++ |.+++.. .+|++++++++.. ...+.....+.+
T Consensus 266 V~TG~GRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~ei~~--~~~~~~~~~~~~--------------- 325 (460)
T PRK06916 266 VATGFGRTGKMFACEHENV-TPDIMTAG--KGLTGGYLPIAITVTTDEIYN--AFYGDYEEQKTF--------------- 325 (460)
T ss_pred hhhCCCcCchhhHHHhcCC-CCCeeeee--hhhhcCccccceeeecHHHHH--HhhccccccCcc---------------
Confidence 965 321110 0111111 57998876 9887542 4789999988732 221100000000
Q ss_pred chhhhhc-CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCC-
Q 043646 347 DIEEREN-GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTN- 424 (625)
Q Consensus 347 ~~~~~~~-~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~- 424 (625)
..... .|.|-.+++..+.++.+ +. +.+.++.+.+.+++.+.|+++....+++.. ..++..+.+.+..+..
T Consensus 326 --~~~~T~~gnpl~~aaa~a~l~~l--~~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Glm~giel~~~~~~ 397 (460)
T PRK06916 326 --FHGHSYTGNPLGCAVALANLELY--EK---TNLIEQVARKTEYVATQLEDLFALKHVGDI-RQLGLMVGIELVKNKET 397 (460)
T ss_pred --ccCCCCCCCHHHHHHHHHHHHHH--Hh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEe-ecCCceeeEEeeccccc
Confidence 00001 13333333344555554 22 245667777777887777654221111111 1234445554432210
Q ss_pred CCCccccccCCCCCC-hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 043646 425 SSPENMKIERNKPLH-GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYY 503 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~-~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~ 503 (625)
.+ ....... ...+...+.+ +||.+.+. ...+|+.+++.
T Consensus 398 ~~------~~~~~~~~~~~i~~~~~~-~Gvl~~~~----------------------------------g~~l~~~Ppl~ 436 (460)
T PRK06916 398 KE------PFEWTERVGVQVCKRSRE-LGMLTRPL----------------------------------GNTIVFMPPLA 436 (460)
T ss_pred cc------CCCchhhHHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEeCCcc
Confidence 00 0000001 2356666654 79988631 25699999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 043646 504 MSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 504 ~t~edid~ll~aL~~~~~~~ 523 (625)
+|++|+++++++|++++.+.
T Consensus 437 it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 437 STIDELDEMLRILYKAISDV 456 (460)
T ss_pred cCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999988753
No 340
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.51 E-value=1.8e-11 Score=132.70 Aligned_cols=352 Identities=15% Similarity=0.085 Sum_probs=194.3
Q ss_pred ccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+++..|+ -|+|..+ .|-.++.+.+++.+++.... ..... .. +.....++.++++++++..-+
T Consensus 37 ~~l~d~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~-~~~~~-~~----~~~~~~~la~~l~~~~~~~~~- 106 (427)
T TIGR00508 37 VELTLDDGR---RLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMS-HVMFG-GF----THKPAIELCQKLVKMTPNALD- 106 (427)
T ss_pred eEEEeCCCC---EEEEccchHHHhcCCCCCHHHHHHHHHHHHhcC-Ccccc-cc----CCHHHHHHHHHHHhhCCCCCC-
Confidence 334444453 3788643 35677899999988875421 11110 00 112345566777777754333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVVE 207 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv~ 207 (625)
.+.|+.+|+++.-..+-.++..... + =.++...+|.....+|.....++...+- .+..
T Consensus 107 ~v~f~~sGseA~e~AlklAr~~~~~---~------~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 177 (427)
T TIGR00508 107 CVFLADSGSVAVEVALKMALQYWQA---K------GEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIF 177 (427)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHh---h------CCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeE
Confidence 8899988888733333222210000 0 0123232455555555544433332221 1112
Q ss_pred EecCCC------CCCCHHHHHHHHHHhhhCCCCeEEEEecc-cCccccc----cCHHHHHHHHHHcCCEEEEeccCc-CC
Q 043646 208 IGLDDN------GLLDIEALRSQLELYKAAKRPMLGSFSAC-SNVTGIY----SDTRSIARLLHQYGGFACFDFAAS-GP 275 (625)
Q Consensus 208 v~~~~~------~~ld~~~L~~~l~~~~~~~~~~lv~~~~~-~n~TG~~----~~l~~I~~la~~~g~~vivD~A~~-~g 275 (625)
++.... ..-|++++++++.+ ..++..+|++..+ +...|.+ ..+++|.++|++||+++|+|++|. +|
T Consensus 178 ~~~p~~~~~~~~~~~~~~~l~~~l~~--~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~G 255 (427)
T TIGR00508 178 APAPQNRFDEEWNEEAITPLAKLMEL--HSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFG 255 (427)
T ss_pred cCCCCccccchhHHHHHHHHHHHHHh--cCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 221111 01146777778763 2245778888876 5555654 448899999999999999999974 22
Q ss_pred Cccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc----ccCCceEEeeccccccccccccch
Q 043646 276 YVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS----TCGGGTVNYVNAFDEKDTLYLEDI 348 (625)
Q Consensus 276 ~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~----~~ggg~v~~~~~~~~~~~~~~~~~ 348 (625)
.... -....+. .+|++++ .|.++|.. .++.++.++++.+ .+... ...+.+
T Consensus 256 r~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~~~~--~~~~~~~~~~~~~~T------------------ 312 (427)
T TIGR00508 256 RTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDKVAQ--TISSGEAGCFMHGPT------------------ 312 (427)
T ss_pred cCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHHHHH--HHhcCCCCccccCCC------------------
Confidence 2111 1111111 5788875 59986542 3577777777622 22110 000000
Q ss_pred hhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCc
Q 043646 349 EERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPE 428 (625)
Q Consensus 349 ~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~ 428 (625)
..|.|..++.+.++++.+. .. .+.++.+.+.+++.+.|+++.....++. ....+.++.+.+..+.
T Consensus 313 ----~~g~p~~~aaa~a~l~~l~--~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~-vrg~G~~~~i~~~~~~----- 377 (427)
T TIGR00508 313 ----FMGNPLACAVAEASLAILL--EG---EWQKQVSAIENQLKRELSPLRKNPVVKD-VRVLGAIGVVEMYKPV----- 377 (427)
T ss_pred ----CCcCHHHHHHHHHHHHHHH--hC---CHHHHHHHHHHHHHHHHHHhhcCCCEEe-EeccccEEEEEECCcc-----
Confidence 1134444555556666552 21 3456777777788887766521111111 1224567766664321
Q ss_pred cccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHH
Q 043646 429 NMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEE 508 (625)
Q Consensus 429 ~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ed 508 (625)
....+.+.|.+ .||.+.+. ...+|++++..+|++|
T Consensus 378 ----------~~~~~~~~l~~-~Gv~~~~~----------------------------------~~~l~~~ppl~~t~~~ 412 (427)
T TIGR00508 378 ----------NVEELQKKFVE-QGVWIRPF----------------------------------GKLIYVMPPYIITTEQ 412 (427)
T ss_pred ----------CHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEECCCCCCHHH
Confidence 24567777755 69988521 1469999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 043646 509 FEFILAALEFIAAY 522 (625)
Q Consensus 509 id~ll~aL~~~~~~ 522 (625)
||++++++++.+++
T Consensus 413 id~~~~~l~~~l~~ 426 (427)
T TIGR00508 413 LQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998754
No 341
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=2e-11 Score=133.20 Aligned_cols=356 Identities=14% Similarity=0.036 Sum_probs=198.2
Q ss_pred ccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+++..| .-|+|..+ .|...+.|.+++.+++.... ..+.. + .......++.+.+++.+....+
T Consensus 45 ~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~-~~~~~-~----~~~~~~~~lae~L~~~~p~~~~- 114 (457)
T PRK05639 45 ALIEDVDG---NVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ-HSMIG-Y----THSERAIRVAEKLAEISPIENP- 114 (457)
T ss_pred CEEEeCCC---CEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcc-ccccC-c----cCCHHHHHHHHHHHhhCCCCcC-
Confidence 44444444 35888743 45567899999999885421 11111 1 1123445677778887754333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcCC-------------eEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
.+.|+.||+.+.-.++-.++. -.|.. .|+. ...+|.....++...|. .++
T Consensus 115 ~v~f~~SGsEA~e~AlklAr~---------------~tgr~-~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~ 178 (457)
T PRK05639 115 KVLFGLSGSDAVDMAIKVSKF---------------STRRP-WILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVV 178 (457)
T ss_pred EEEEeCchHHHHHHHHHHHHH---------------hcCCC-eEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCce
Confidence 799998888874444433331 12222 3544 44555554433332221 244
Q ss_pred EEecCCCCC--------CCHH--------HHHHHHHHh-hhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCE
Q 043646 207 EIGLDDNGL--------LDIE--------ALRSQLELY-KAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGF 265 (625)
Q Consensus 207 ~v~~~~~~~--------ld~~--------~L~~~l~~~-~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~ 265 (625)
.+|...... .+.+ .|++.+... ...+++.+|++..+....|.+.| +++|.++|++||++
T Consensus 179 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~l 258 (457)
T PRK05639 179 WIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGIL 258 (457)
T ss_pred EeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 555432110 1222 344443211 11356889999999888888766 78999999999999
Q ss_pred EEEeccCcC-CCccc--cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccccc
Q 043646 266 ACFDFAASG-PYVKI--NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDT 342 (625)
Q Consensus 266 vivD~A~~~-g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~ 342 (625)
+|+|+++.. |-... .....+. .+|+++++ |.+++..++|++++++++.. .. .... +.+
T Consensus 259 lI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~g--K~l~gG~pi~av~~~~~i~~--~~-~~~~-~~T------------ 319 (457)
T PRK05639 259 LVMDEVQTGIGRTGKWFASEWFEV-KPDLIIFG--KGVASGMGLSGVIGRKELMD--LT-SGSA-LLT------------ 319 (457)
T ss_pred EEEechhhccCcCchHHHHHhcCC-CCCEEEec--hhhcCCCcceeEEehHHHHh--hc-CCCc-ccC------------
Confidence 999999762 21110 1111112 57999865 99976566799999988832 11 0000 000
Q ss_pred ccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC-CcEEEeCCCCCCCcceEEEEecc
Q 043646 343 LYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN-QNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 343 ~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l-~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
..|.|..+++..+.++.+. .+.+.++...+.+++++.|+++ ....+++.. ..++..+.+....
T Consensus 320 ----------~~g~p~~~aaa~a~l~~l~-----~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~V-rG~Gl~~gve~~~ 383 (457)
T PRK05639 320 ----------PAANPVISAAAEATLEIIE-----EENLLKNALKVGEFIKKRLLEMKESFEVIGDV-RGKGLMIGVEIVK 383 (457)
T ss_pred ----------CCcCHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHHHHHHhCCCEEee-ccceeEEEEEEec
Confidence 1234444444445555552 2244556666677777776553 111112111 1133444443322
Q ss_pred CCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecC
Q 043646 422 TTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFP 501 (625)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~ 501 (625)
+.. ....-....+.+.+.+ +||.+.+. + . .+..+|++++
T Consensus 384 ~~~---------~~~~~~~~~~~~~~~~-~Gv~~~~~---g----~------------------------~~~~lr~~Pp 422 (457)
T PRK05639 384 ENG---------KPDPELTGKICWRAFE-LGLILPSY---G----M------------------------FGNVIRITPP 422 (457)
T ss_pred CCC---------CCCHHHHHHHHHHHHh-CCeEEeec---C----C------------------------CCCEEEEeCC
Confidence 110 0000012356666655 69998632 0 0 1368999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhh
Q 043646 502 YYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 502 ~~~t~edid~ll~aL~~~~~~~~ 524 (625)
+.+|++|+|+++++|++++....
T Consensus 423 l~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 423 LVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987753
No 342
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.50 E-value=8.7e-11 Score=120.59 Aligned_cols=377 Identities=16% Similarity=0.114 Sum_probs=225.9
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcchHHHHH-HHHHhhCCCCCCCCCC-cchhhHHHHH
Q 043646 44 HPPHSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRSLRYIED-YIINNVLPFYGNTHTS-DSYVGQRMTK 121 (625)
Q Consensus 44 ~~~~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~p~~v~e-a~~~~l~~~~~n~~~~-~~~~~~~~~~ 121 (625)
..++..+..+.++++|+..--.. ....|+..+.....-|.|+. .+.+. +.|-.+-+. .-..+.+..+
T Consensus 52 ~~~~~~sE~e~l~~l~~ia~kN~---------~~~sfiG~GyY~~~~P~vI~rnile~--pewyTaYTPYQpEISQGrLq 120 (450)
T COG0403 52 PLPKPLSEYEALAELKEIASKNK---------VFTSFIGAGYYDTYTPPVILRNILEN--PEWYTAYTPYQPEISQGRLE 120 (450)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCc---------hhhhhccCcccCCcCcHHHHHHhhcC--ccccccCCCCchhhhhHHHH
Confidence 45555566788888887553221 11123444333433334433 44321 111111111 0123555666
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH-
Q 043646 122 MVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ- 200 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~- 200 (625)
..-+....++++.|.+-.+.-++ -++|++-..++.+.. +...++..|+++...|+.....++.
T Consensus 121 aLfefQtlv~dLTGm~VANASm~--DeaTAaAEAm~ma~r--------------~~k~k~~~~~V~~~vhpqt~~Vl~Tr 184 (450)
T COG0403 121 ALFEFQTLVADLTGLDVANASML--DEATAAAEAMLMAKR--------------VTKKKRNKFLVPKDVHPQTLDVLRTR 184 (450)
T ss_pred HHHHHHHHHHHHhCCCcccchhh--hhHHHHHHHHHHHHH--------------hhcCcCceEEecCCCCHHHHHHHHhh
Confidence 77788899999999986533444 356664444444442 2232233699999999999887765
Q ss_pred ---cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccc-cccCHHHHHHHHHHcCCEEEEecc-CcCC
Q 043646 201 ---SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTG-IYSDTRSIARLLHQYGGFACFDFA-ASGP 275 (625)
Q Consensus 201 ---~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG-~~~~l~~I~~la~~~g~~vivD~A-~~~g 275 (625)
.|.+++.++.+ |+++|+++ .+ +.+..+++..|+ ..| ...++++|.+.+|++|+++++=.= -+.+
T Consensus 185 a~~~g~~i~~~~~~-----d~~~l~~~-~~----~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~ 253 (450)
T COG0403 185 AEGLGIEIEVVDAD-----DLDDLESA-DD----GDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALG 253 (450)
T ss_pred cccCceEEEEeccc-----hhhhhhhc-cc----cCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhh
Confidence 36777777765 78888887 42 468889998886 667 667799999999999998776421 1111
Q ss_pred CccccCCCCCCCCCcEEEEcCCCC-----CCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 276 YVKINLRSRNIDGYDAIFLATHKF-----LGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 276 ~~~id~~~~~~~~~D~v~~S~hK~-----lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
.... .-++ |+|+++.+.+-+ ||||. +|++.+++++ .+.++-...| -+++....-......+-+..+-
T Consensus 254 LL~p-PGe~---GADIvvG~~QrfGvPmgfGGPh-ag~fA~~~~~--~R~mPGRlVG-~S~D~~G~~A~rLaLQTREQHI 325 (450)
T COG0403 254 LLKP-PGEF---GADIVVGSAQRFGVPMGFGGPH-AGYFAVKDEF--KRQMPGRLVG-VSVDAAGKRAFRLALQTREQHI 325 (450)
T ss_pred ccCC-cccc---CCceEEecCcccCCCcCCCCcc-eeeeeEhHhH--hhcCCCceee-eeecCCCCchhhhhHHHHHHHH
Confidence 1111 1122 899999988864 45566 7999999998 4566544443 2222211001112233344456
Q ss_pred hhcCCChhHHHH-----HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCC
Q 043646 351 RENGGTPQIVQM-----IRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTN 424 (625)
Q Consensus 351 ~~~~gt~~~~~~-----~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~ 424 (625)
|.+..|.||+.. ..+++-.......|..+|..+.+.++.++.++|+++. |++++... -+-.|.+.-+.
T Consensus 326 RReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~-----fFdt~~v~~~~- 399 (450)
T COG0403 326 RREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH-----FFDTFTVRVPE- 399 (450)
T ss_pred hhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccc-----ceeeEEEecch-
Confidence 677788887653 1222222233567888999999999999999999653 57776542 12222222110
Q ss_pred CCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 043646 425 SSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYM 504 (625)
Q Consensus 425 ~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~ 504 (625)
-....+.+.. ...||.++.- .+..+-|++.-.+
T Consensus 400 -------------~~~~~l~~~~-~~~G~~L~~~---------------------------------~~~~~~ia~tEt~ 432 (450)
T COG0403 400 -------------EVAEALLAAA-IAGGINLRRV---------------------------------DADTVLIALTETT 432 (450)
T ss_pred -------------hHHHHHHHHH-HhcCCceeee---------------------------------cCCceEEEeeccc
Confidence 0022333333 2356666521 2356888998899
Q ss_pred CHHHHHHHHHHHHHH
Q 043646 505 SNEEFEFILAALEFI 519 (625)
Q Consensus 505 t~edid~ll~aL~~~ 519 (625)
|++||+.+++++...
T Consensus 433 t~~~i~~l~~~~~~~ 447 (450)
T COG0403 433 TKEDIDALVAAFGGV 447 (450)
T ss_pred CHHHHHHHHHHHhhh
Confidence 999999999998754
No 343
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=1.6e-11 Score=132.69 Aligned_cols=352 Identities=12% Similarity=0.045 Sum_probs=192.9
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| .-|+|..+ .|...+.|.+++.+++.... ..... ....+...++.++|++.....-+
T Consensus 31 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~-~~~~~-----~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 31 GVFLTLEDG---STVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMS-HVMFG-----GLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred eeEEEECCC---CEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCC-CcccC-----CcCCHHHHHHHHHHHhhCCCCcC
Confidence 444555544 45888643 46677899999999886431 11110 01223455677778777653333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv 206 (625)
.+.|+.||+++.-.++-.++.... . .-.++...+|.....+|.....++...+- .+.
T Consensus 102 -~v~f~~SGseA~e~AlklAr~~~~-----~----~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 171 (422)
T PRK05630 102 -HVFYSDSGSVSVEVAIKMALQYSK-----G----QGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQI 171 (422)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHHH-----h----cCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCe
Confidence 799998898873333322221000 0 00122222344444555544333322221 223
Q ss_pred EEecCCCCCCCH-------HHHHHHHHHhhhCCCCeEEEEecc-cCccccccC----HHHHHHHHHHcCCEEEEeccCcC
Q 043646 207 EIGLDDNGLLDI-------EALRSQLELYKAAKRPMLGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 207 ~v~~~~~~~ld~-------~~L~~~l~~~~~~~~~~lv~~~~~-~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~ 274 (625)
.+|.......+. +.+++.+. +++.+|+++.. ....|.+.| +++|.++|++||+++|+|+++..
T Consensus 172 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG 246 (422)
T PRK05630 172 FAPAPPVRGSSPQEISEYLRSLELLID-----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATG 246 (422)
T ss_pred EcCCCcccCCChHHHHHHHHHHHHHHh-----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeC
Confidence 343321111122 33344443 46888888874 777787644 78999999999999999999742
Q ss_pred -CCccc--cCCCCCCCCCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 275 -PYVKI--NLRSRNIDGYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 275 -g~~~i--d~~~~~~~~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
|-... .....+. .+|+++++ |.+++. ..+|++++++++.. .+.... +.+.+. ..
T Consensus 247 ~GrtG~~~a~~~~gv-~PDi~t~g--K~l~gG~~p~~av~~~~~i~~--~~~~~~-~~~~~~----------------h~ 304 (422)
T PRK05630 247 FGRTGELFATLAAGV-TPDIMCVG--KALTGGFMSFAATLCTDKVAQ--LISTPN-GGGALM----------------HG 304 (422)
T ss_pred CCcCchhhHHHhcCC-CCCeeeee--chhhcCccccceeeccHHHHH--HHhccC-CCCccc----------------cC
Confidence 21110 0111111 57888765 999552 23588888888732 221100 000000 00
Q ss_pred hhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC---CcEEEeCCCCCCCcceEEEEeccCCCCCC
Q 043646 351 RENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN---QNIQVLGNTSVKRQAILSFLVYSTTNSSP 427 (625)
Q Consensus 351 ~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l---~gv~v~~~~~~~~~~i~~f~~~~~~~~~~ 427 (625)
.-..|.|..++.+.++++.+. .. ...++.+++.+++.+.|+.+ |.+.-+ ..++.++.+.+....
T Consensus 305 ~T~~g~Pla~aaa~aaL~~l~--~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~v----Rg~Gl~~~ie~~~~~---- 371 (422)
T PRK05630 305 PTFMANPLACAVAHASLEIIE--TG---MWRKQVKRIEAELIAGLSPLAHLPGVADV----RVLGAIGVVEMEQPV---- 371 (422)
T ss_pred CCCcCCHHHHHHHHHHHHHHH--hC---cHHHHHHHHHHHHHHHHHHhhcCCCeeee----eccccEEEEEECCcc----
Confidence 001244555555556666652 21 33456666677777766543 322111 124566666553211
Q ss_pred ccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHH
Q 043646 428 ENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNE 507 (625)
Q Consensus 428 ~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~e 507 (625)
....+.+.+.+ +||.+++. .+.+||.+++.+|++
T Consensus 372 -----------~~~~~~~~~~~-~Gl~~~~~----------------------------------g~~l~~~PpL~it~~ 405 (422)
T PRK05630 372 -----------DMEEATQAAVD-HGVWLRPF----------------------------------GRLVYVMPPYITTSE 405 (422)
T ss_pred -----------cHHHHHHHHHH-CCeEEEec----------------------------------CCEEEEECCccCCHH
Confidence 13467777755 79988631 157999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 043646 508 EFEFILAALEFIAAY 522 (625)
Q Consensus 508 did~ll~aL~~~~~~ 522 (625)
|+|+++++|++++..
T Consensus 406 ~i~~~~~~l~~al~~ 420 (422)
T PRK05630 406 QIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998764
No 344
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.50 E-value=4.9e-11 Score=130.26 Aligned_cols=342 Identities=15% Similarity=0.071 Sum_probs=193.1
Q ss_pred EeccCCC-----CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 043646 79 TYADHTA-----SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI 153 (625)
Q Consensus 79 ~Yld~~~-----~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal 153 (625)
-|+|..+ .|...+.|.+++.+++....... . ....+...++.++|+++++...+ .+.|+++|+.+.-
T Consensus 73 ~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~------~~~~~~~~~lae~L~~~~p~~~~-~v~f~~sGseAve 144 (459)
T PRK06082 73 KYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP-R------RFTNETAIECAEKLTEIAGGELN-RVLFAPGGTSAIG 144 (459)
T ss_pred EEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc-C------ccCCHHHHHHHHHHHHhCCCCCC-EEEECCCcHHHHH
Confidence 4888653 35567899999999886432111 0 11235566788888888864333 7999978887733
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEEEecCCC-----CCC
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVEIGLDDN-----GLL 216 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v~~~~~-----~~l 216 (625)
.++-.++. . .|...+|......|.....++...|. .+..+|.... ...
T Consensus 145 ~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06082 145 MALKLARH--------------I-TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA 209 (459)
T ss_pred HHHHHHHH--------------h-cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh
Confidence 33322221 1 22222455556667766555543332 1233332110 011
Q ss_pred C------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEeccCcC-CCccc--cCCCC
Q 043646 217 D------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFDFAASG-PYVKI--NLRSR 284 (625)
Q Consensus 217 d------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~~~-g~~~i--d~~~~ 284 (625)
| ++.|++.+.+. +++.+|++..+.+..+.+.| +++|.++|++||+++|+|+++.. |-... -...+
T Consensus 210 ~~~~~~~~~~l~~~i~~~---~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~ 286 (459)
T PRK06082 210 DGSDVHYADYLEYVIEKE---GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAY 286 (459)
T ss_pred hHHHHHHHHHHHHHHhcC---CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhh
Confidence 1 35577777531 46788999888776433455 89999999999999999999763 21110 11111
Q ss_pred CCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH
Q 043646 285 NIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI 363 (625)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 363 (625)
+. .+|+++++ |.+++.. .+|++++++++.. ...... ...| ..|.|-.+++.
T Consensus 287 gv-~PDiv~~g--Kgl~gG~~P~~av~~~~~i~~--~~~~~~-~~~T----------------------~~gnpl~~aaa 338 (459)
T PRK06082 287 GI-EPDILCIG--KGLGGGLVPIAAMITKDKYNT--AAQISL-GHYT----------------------HEKSPLGCAAA 338 (459)
T ss_pred CC-CCCEEEec--ccccCCCCcceEEEEcHHHHh--hccCCC-CCCC----------------------CCcCHHHHHHH
Confidence 11 57998865 9997642 4688888887631 111000 0000 12334334444
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc-EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC--Ch
Q 043646 364 RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN-IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL--HG 440 (625)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g-v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l--~~ 440 (625)
.+.++.+ +. +.+.++.+++.+++.+.|+++.. ..+++.. ..++..+.+.+..+.. ..... ..
T Consensus 339 ~a~L~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rG~Gl~~~ve~~~~~~---------~~~~~~~~~ 403 (459)
T PRK06082 339 LATIEVI--EQ---EGLLEKVKADSQFMRERLLEMKAKYPLIGDV-RGIGLLWGVELVTDRH---------TKERAYDEA 403 (459)
T ss_pred HHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHHhhCCCeeee-eeccceeEEEEccCcc---------ccCccHHHH
Confidence 4556555 22 24566777777777777755311 1111111 1234455555432210 00000 02
Q ss_pred HHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 441 PFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 441 ~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
..+...+.+ +||.+.+. ..+.+|+++++.+|++|+|++++++++++
T Consensus 404 ~~~~~~~~~-~Gvl~~~~---------------------------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l 449 (459)
T PRK06082 404 EAVLYRCLN-NGLSFKVS---------------------------------QGNVIQLSPPLIITREELTQALAILEEAI 449 (459)
T ss_pred HHHHHHHHh-CCCEEEec---------------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 345555544 69887631 12679999999999999999999999998
Q ss_pred Hhh
Q 043646 521 AYG 523 (625)
Q Consensus 521 ~~~ 523 (625)
.+.
T Consensus 450 ~~~ 452 (459)
T PRK06082 450 AKI 452 (459)
T ss_pred HHH
Confidence 764
No 345
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=6.3e-13 Score=126.90 Aligned_cols=286 Identities=16% Similarity=0.116 Sum_probs=180.9
Q ss_pred HHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEe
Q 043646 130 IKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIG 209 (625)
Q Consensus 130 ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~ 209 (625)
++.--+..++ .+.+ |.|+.+.|..++++. +.||.+ .|+..+++|.-+.......+++|+.+|
T Consensus 78 ~~~dkpLt~d-nic~-GvGsDE~ID~iiR~~---------------c~PGke-KIl~cPPtysMY~v~A~iNd~eVvkvp 139 (375)
T KOG0633|consen 78 LAQDKPLTSD-NICV-GVGSDELIDLIIRCV---------------CDPGKE-KILDCPPTYSMYVVDAAINDAEVVKVP 139 (375)
T ss_pred cccCCCCCcc-ceEE-ecCcHHHHHHHHhhe---------------ecCCcc-ceeecCCcceeEEEEeecCCceEEEec
Confidence 3333444455 5666 589999999998876 568844 488888787766555666799999999
Q ss_pred cCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc-CCEEEEeccCcCCCccccC--C--CC
Q 043646 210 LDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY-GGFACFDFAASGPYVKINL--R--SR 284 (625)
Q Consensus 210 ~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~-g~~vivD~A~~~g~~~id~--~--~~ 284 (625)
++++..++.+++.+.+..+ ..+|++.+++|.||||.+.-.+.|.++.+-. +.+|++|+|+ +.+.- . .|
T Consensus 140 l~pdF~lnvdai~evl~~d---s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY----idFsg~~S~~~l 212 (375)
T KOG0633|consen 140 LNPDFSLNVDAIAEVLELD---SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY----IDFSGVESRMKL 212 (375)
T ss_pred CCCCccccHHHHHHHHhcc---ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeee----EeeccccccchH
Confidence 9999999999999999853 4799999999999999999999999988754 7999999992 22211 0 11
Q ss_pred CCCCCcEEE-EcCCCCCCCCC-CceEEEEeccccc-cCCCC-CcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 285 NIDGYDAIF-LATHKFLGGPG-TPGILLISKALYQ-LGSSP-PSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 285 ~~~~~D~v~-~S~hK~lggp~-g~G~l~v~~~~~~-l~~~~-p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
.......++ -+++|.||-.+ .+|+.+.+..+.+ ++.++ |+. -+..
T Consensus 213 V~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYN-------------------------------iS~~ 261 (375)
T KOG0633|consen 213 VKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYN-------------------------------ISVA 261 (375)
T ss_pred hHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCcc-------------------------------ccch
Confidence 111234443 47889987433 2677777766632 11111 110 0111
Q ss_pred HHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHhhCCCCcEE-EeCCCCCCCcceEEEEeccCCCCCCccccccCCCCC
Q 043646 361 QMIRAALAFWVK-EYIGYEVIKKQEDVYIESALGRILPNQNIQ-VLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPL 438 (625)
Q Consensus 361 ~~~~aal~~~~~-~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~-v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l 438 (625)
+. .+|++.+.. ...-++..++.+.+-+.++...|.++|++. +.++. ....+...+..++ .++
T Consensus 262 ~s-~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~---daNFiLi~v~~~~------------n~~ 325 (375)
T KOG0633|consen 262 GS-VAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGS---DANFILIEVTGGD------------NGM 325 (375)
T ss_pred hH-HHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcc---cccEEEEEEcCCC------------cHH
Confidence 11 233433311 111255566666666778888998888775 23332 1223333333221 122
Q ss_pred ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHH
Q 043646 439 HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEF 518 (625)
Q Consensus 439 ~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~ 518 (625)
. ..+...+...+||.||- .+... + ..|++||++| |+|+.+.+++.+++
T Consensus 326 a-kkly~q~at~~gVvVRf---rgse~-----~--------------------c~G~lRitvG---t~EentvL~k~~K~ 373 (375)
T KOG0633|consen 326 A-KKLYKQDATKMGVVVRF---RGSEE-----G--------------------CKGYLRITVG---TPEENTVLMKCLKQ 373 (375)
T ss_pred H-HHHHHHHHHhcceEEEE---cCCcc-----c--------------------cceeEEEEcC---CcccchHHHHHHHh
Confidence 2 23333444668999982 11100 0 3599999999 88999999999986
Q ss_pred H
Q 043646 519 I 519 (625)
Q Consensus 519 ~ 519 (625)
+
T Consensus 374 ~ 374 (375)
T KOG0633|consen 374 F 374 (375)
T ss_pred h
Confidence 5
No 346
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.49 E-value=2.1e-11 Score=133.30 Aligned_cols=357 Identities=15% Similarity=0.094 Sum_probs=199.5
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..| ..|+|..+ .|...+.|.+++.+++......... ....+...++.++|++++....+
T Consensus 38 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~------~~~~~~~~~lae~L~~~~p~~~~ 108 (466)
T PRK07030 38 GVWLEDFEG---KRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA------GFSHEPVIELSERLVKITPPGLS 108 (466)
T ss_pred ccEEEECCC---CEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc------ccCCHHHHHHHHHHHHhCCCCcC
Confidence 455555545 35888643 3566789999999988642111000 01234456677788887753333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~ 207 (625)
.|.|+.+|+.+.-.++-.++... +.+ -.++...+|.....+|.....++...|. .+..
T Consensus 109 -~v~f~~sGsEAve~AlKlAr~~~-----~~~----g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~ 178 (466)
T PRK07030 109 -RCFYADNGSSAIEVALKMSFHYW-----RNR----GKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIK 178 (466)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHH-----HHh----CCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEE
Confidence 89999888887433332222100 000 0123222344444555554444432221 1233
Q ss_pred EecCCC-----C-------CCCHHHHHHHHHHhhhCCCCeEEEEec-ccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 208 IGLDDN-----G-------LLDIEALRSQLELYKAAKRPMLGSFSA-CSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 208 v~~~~~-----~-------~ld~~~L~~~l~~~~~~~~~~lv~~~~-~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
+|.... + .-+++.+++.+.+ ..+++.+|++.. +....|.+.+ +++|.++|++||+++|+|+
T Consensus 179 ~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~--~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE 256 (466)
T PRK07030 179 VPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE--HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDE 256 (466)
T ss_pred cCCCCccccccCCCHHHHHHHHHHHHHHHHHh--CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 332210 0 0124566777762 235678888887 5777788755 7899999999999999999
Q ss_pred cCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc------ccCCceEEeecccccc
Q 043646 271 AAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS------TCGGGTVNYVNAFDEK 340 (625)
Q Consensus 271 A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~------~~ggg~v~~~~~~~~~ 340 (625)
++. +|-... ....++. .+|+++++ |.+++.. .+|++++++++.+ .+... ...++|
T Consensus 257 V~TGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~ei~~--~~~~~~~~~~~~~h~~T---------- 321 (466)
T PRK07030 257 IAVGFGRTGTMFACEQAGI-RPDFLCLS--KALTGGYLPLAAVLTTDTVYQ--AFYDDYPTLRAFLHSHS---------- 321 (466)
T ss_pred hhhCcCccccchHHHhcCC-CCCEEeee--hhccCCcccceEEEecHHHHH--HHhcccccccccccCCC----------
Confidence 965 332111 0111111 57999996 9887653 4789999988732 21100 000111
Q ss_pred ccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC---CcEEEeCCCCCCCcceEEE
Q 043646 341 DTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN---QNIQVLGNTSVKRQAILSF 417 (625)
Q Consensus 341 ~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l---~gv~v~~~~~~~~~~i~~f 417 (625)
..|.|-.+++..+.++.+. .+.+.++.+.+.+++.+.|+++ |.+.-+ ..++..+.+
T Consensus 322 ------------~~gnpla~aaa~a~L~~i~-----~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~v----rG~Gl~~gi 380 (466)
T PRK07030 322 ------------YTGNPLACAAALATLDIFE-----QDNVIENNRALARRMAEATAHLADHPHVAEV----RQTGMILAI 380 (466)
T ss_pred ------------CCCCHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHHhcCCCEEEe----EeceeEEEE
Confidence 1233433444445555552 2345667777777777777654 322211 123444555
Q ss_pred EeccCCCCCCccccccCCCCC--C---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCC
Q 043646 418 LVYSTTNSSPENMKIERNKPL--H---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVK 492 (625)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l--~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~ 492 (625)
.+..+.. ...+. . ...+.+.+.+ +|+.+++.
T Consensus 381 e~~~~~~---------~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~---------------------------------- 416 (466)
T PRK07030 381 EMVQDKA---------SKTPYPWQERRGLKVYQHALE-RGALLRPL---------------------------------- 416 (466)
T ss_pred EeccCcc---------ccccCcchhHHHHHHHHHHHH-CCeEEEec----------------------------------
Confidence 4432210 00000 0 1346666654 69888631
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 493 PGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 493 ~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
...+|+.+++.+|++|++++++++++.+.+.
T Consensus 417 g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 1569999999999999999999999998875
No 347
>PRK07480 putative aminotransferase; Validated
Probab=99.48 E-value=2.6e-11 Score=132.32 Aligned_cols=361 Identities=13% Similarity=0.012 Sum_probs=194.9
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ -|+|..+. |...+.|.+++.+++......... + ....+...++.++|++.+...-+
T Consensus 41 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~--~---~~~~~~~~~lae~L~~~~p~~~~ 112 (456)
T PRK07480 41 GVYLWDSEGN---KILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTF--F---KTTHPPAIELAAKLAEVAPPGFN 112 (456)
T ss_pred eeEEEeCCCC---EEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccc--c---ccCCHHHHHHHHHHHHhCCCCcC
Confidence 4555555553 48887443 566789999999988642111000 0 01234556677888888764333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhHHHHHHcCC------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNLLSWRQSLA------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~~~G~------------~vv 206 (625)
.+.|+.||+++.-.++-.++.... . . =.++. ..|+.- ..+|.....++...|. .+.
T Consensus 113 -~v~f~~SGseA~e~AlklAr~~~~-----~---~-g~~~r-~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~ 181 (456)
T PRK07480 113 -HVFFTNSGSEANDTVLRMVRHYWA-----L---K-GKPQK-KVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIV 181 (456)
T ss_pred -EEEEeCCcHHHHHHHHHHHHHHHH-----h---c-CCCCC-cEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCe
Confidence 899998888874443322221000 0 0 01222 235544 4455544433332221 112
Q ss_pred EEecCCCC----CCC--------HHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 207 EIGLDDNG----LLD--------IEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 207 ~v~~~~~~----~ld--------~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
.++..... ..+ ++.|++.+.+ ...+++.+|++..+....|.+.| +++|.++|++||+++|+|+
T Consensus 182 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE 260 (456)
T PRK07480 182 HIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE-LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADE 260 (456)
T ss_pred ecCCCcccccccCCChHHHHHHHHHHHHHHHHh-cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 22211100 011 2555555532 12246789999998888898877 8999999999999999999
Q ss_pred cCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCC--CCc-ccCCceEEeeccccccccc
Q 043646 271 AAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSS--PPS-TCGGGTVNYVNAFDEKDTL 343 (625)
Q Consensus 271 A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~--~p~-~~ggg~v~~~~~~~~~~~~ 343 (625)
++. +|-.. ......+. .+|+++++ |.+++.. .+|++++++++.. .+ .+. ...++|
T Consensus 261 V~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~--~~~~~~~~~~~~~T------------- 322 (456)
T PRK07480 261 VICGFGRTGEWFGSQHFGI-KPDLMTIA--KGLTSGYIPMGAVGVGDRVAE--VLIEEGGEFNHGFT------------- 322 (456)
T ss_pred hhhCCCcCcchhhhhhcCC-CCCeeeee--hhhccCCccceEEEEcHHHHH--HHhcCCCCcccCCC-------------
Confidence 974 43221 11111111 57988876 9987532 3688888888732 11 110 011111
Q ss_pred cccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccC
Q 043646 344 YLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQE-DVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYST 422 (625)
Q Consensus 344 ~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~-~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~ 422 (625)
..|.|..++...++++.+. .. .+.++. ..+.+++.+.|+++....+++.. ...+..+.+.+..+
T Consensus 323 ---------~~gnpl~~Aaa~a~L~~l~--~~---~l~~~~~~~~g~~l~~~l~~l~~~~~i~~v-rG~Glm~gie~~~~ 387 (456)
T PRK07480 323 ---------YSGHPVAAAVALANLRILR--DE---GIVERVRDDTGPYLQKRLRELADHPLVGEV-RGVGLVGAIELVKD 387 (456)
T ss_pred ---------CCcCHHHHHHHHHHHHHHH--hC---CHHHHHHHHHHHHHHHHHHHhhcCCCeeeE-EeecceEEEEEecc
Confidence 1244544555556666652 22 344455 35555555555443111111110 11334444444322
Q ss_pred CCCCCccccccCCCCC-C----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEE
Q 043646 423 TNSSPENMKIERNKPL-H----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTR 497 (625)
Q Consensus 423 ~~~~~~~~~~~~~~~l-~----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iR 497 (625)
.. ..... . ...+...+.+ +||.+.+ + .+.+|
T Consensus 388 ~~---------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~---~-------------------------------~~~l~ 423 (456)
T PRK07480 388 KA---------TRERFEAGGGVGTICRDHCFA-NGLIMRA---V-------------------------------GDRMI 423 (456)
T ss_pred cc---------ccccCcchhhHHHHHHHHHHH-CCcEEee---c-------------------------------CCEEE
Confidence 10 00010 1 1345555544 6988852 1 15699
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 498 ITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 498 is~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
+++++.+|++|+|+++++|++++.+.
T Consensus 424 ~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 424 ISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998764
No 348
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.48 E-value=4.2e-11 Score=126.72 Aligned_cols=321 Identities=14% Similarity=0.115 Sum_probs=184.5
Q ss_pred CccccCCCCCCceEeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ -|+|.. ..|..++.|.+++.+++...... +. .+ ..+...++.+.++++++. +
T Consensus 15 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~~-~~-----~~~~~~~la~~l~~~~~~--~ 82 (364)
T PRK04013 15 GIYVWDSQGR---RYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA-GP-MF-----EHEEKEEMLEELSKWVNY--E 82 (364)
T ss_pred cCEEEECCCC---EEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc-cC-Cc-----CCHHHHHHHHHHHhhcCC--C
Confidence 3445555553 488863 34566789999999988653211 11 01 134456677888888754 3
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchh-HHHHHHc-------CC-----eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSN-LLSWRQS-------LA-----EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~-~~~~~~~-------G~-----~vv 206 (625)
.++|+.||+.+.-..+-.+. ..+|.. .|+.....|+.. ...+... +. .+.
T Consensus 83 -~v~~~~SGseA~e~Alklar---------------~~~gr~-~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~ 145 (364)
T PRK04013 83 -YVYMGNSGTEAVEAALKFAR---------------LYTGRK-EIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK 145 (364)
T ss_pred -EEEEeCchHHHHHHHHHHHH---------------HHhCCC-EEEEECCccccCchhhccCCCCcccccCCCCCCCCcE
Confidence 78998778776333332222 112322 355555444443 3332211 11 223
Q ss_pred EEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccccc-C---HHHHHHHHHHcCCEEEEeccCcCCCc--ccc
Q 043646 207 EIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYS-D---TRSIARLLHQYGGFACFDFAASGPYV--KIN 280 (625)
Q Consensus 207 ~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~-~---l~~I~~la~~~g~~vivD~A~~~g~~--~id 280 (625)
.+|.+ |++.+++.+. +++++|++.......|.+. | +++|.++|++||+++|+|+++..--. ...
T Consensus 146 ~~~~~-----d~~~l~~~i~-----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a 215 (364)
T PRK04013 146 HIPFN-----DVEAAKEAIT-----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLA 215 (364)
T ss_pred EecCC-----CHHHHHHHhc-----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhH
Confidence 33322 6788888886 5789999999888878764 4 89999999999999999999763211 011
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
....+. .+|+++++ |.+++...+|+++.+.++. +.. .+.| ..|.|-.+
T Consensus 216 ~~~~gv-~PDiv~~g--K~lggG~P~~a~~~~~~~~------~~~-~~~T----------------------~~gnp~~~ 263 (364)
T PRK04013 216 IEHYKV-EPDIVTMG--KGIGNGVPVSLTLTNFDVE------RGK-HGST----------------------FGGNPLAC 263 (364)
T ss_pred HHhcCC-CCCEEEec--ccccCCceeEEEEeccccc------CCC-cCCC----------------------CCcCHHHH
Confidence 111111 57988886 9987644467777766541 111 1111 12344444
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCCh
Q 043646 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHG 440 (625)
Q Consensus 361 ~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~ 440 (625)
+...+.++.+ ++. .+.++.++. + ..+.. +.+ +.. ..++-.+.+.+..+ .
T Consensus 264 aaa~a~l~~i--~~~---~l~~~~~~~---l-~~l~~-~~v---~~v-RG~Gl~~gve~~~~-----------------~ 312 (364)
T PRK04013 264 KAVAVTLRIL--RRE---RLVEKAGEK---F-IEIKG-ERV---VTT-RGRGLMIGIVLKKP-----------------V 312 (364)
T ss_pred HHHHHHHHHH--Hhc---cHHHHHHHH---H-HHhcc-Ccc---eee-eeCcEEEEEEeCCc-----------------H
Confidence 4445556665 222 233333332 2 22322 221 111 11233344433211 2
Q ss_pred HHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHH
Q 043646 441 PFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIA 520 (625)
Q Consensus 441 ~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~ 520 (625)
..+.+.+.+ +|+.+++. ..+.+|+.+++..|++|++.++++|++++
T Consensus 313 ~~i~~~~~~-~Gll~~~~---------------------------------g~~vlr~~Ppl~it~~~i~~~~~~l~~~l 358 (364)
T PRK04013 313 GKYVEELQN-RGYLVHTA---------------------------------GQRVIRLLPPLIISKDTMEEAKSAIEGVI 358 (364)
T ss_pred HHHHHHHHh-CCcEEeeC---------------------------------CCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 356666655 79988631 12679999999999999999999999988
Q ss_pred Hh
Q 043646 521 AY 522 (625)
Q Consensus 521 ~~ 522 (625)
.+
T Consensus 359 ~~ 360 (364)
T PRK04013 359 ND 360 (364)
T ss_pred HH
Confidence 65
No 349
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=1e-10 Score=126.65 Aligned_cols=205 Identities=16% Similarity=0.142 Sum_probs=122.6
Q ss_pred eEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 043646 78 LTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTA 151 (625)
Q Consensus 78 ~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtta 151 (625)
.-|+|..+. |...+.|.+++.+++.... ... ...+...++.+.|.+.++...+ .|.|+.+|+.+
T Consensus 53 ~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~------~~~~~~~~la~~L~~~~~~~~~-~v~f~~SGsEA 122 (433)
T PRK00615 53 KTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SYG------LTSEQEILFAEELFSYLGLEDH-KIRFVSSGTEA 122 (433)
T ss_pred CEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CCC------CCCHHHHHHHHHHHHhCCCCcC-EEEEeCchHHH
Confidence 357776433 5668899999998885421 110 0123455677777787754333 79999888887
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchh---HHHHHHcCCe---E-EEE--e-cCCC----CCC
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSN---LLSWRQSLAE---V-VEI--G-LDDN----GLL 216 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~---~~~~~~~G~~---v-v~v--~-~~~~----~~l 216 (625)
.-.++-.++. . .|.. .|+. ...+|... ..+....+.. . ... + .... ..-
T Consensus 123 ~e~AiklAr~--------------~-tgr~-~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (433)
T PRK00615 123 TMTAVRLARG--------------I-TGRS-IIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYN 186 (433)
T ss_pred HHHHHHHHHH--------------h-hCCC-EEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCC
Confidence 4444433331 1 2322 3444 44455433 1111111100 0 000 0 0000 122
Q ss_pred CHHHHHHHHHHhhhCCCCeEEEEecccCccccccCH----HHHHHHHHHcCCEEEEeccCcCCCcccc----CCCCCCCC
Q 043646 217 DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT----RSIARLLHQYGGFACFDFAASGPYVKIN----LRSRNIDG 288 (625)
Q Consensus 217 d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l----~~I~~la~~~g~~vivD~A~~~g~~~id----~~~~~~~~ 288 (625)
|+++|++.+.+. .+++.+|++..+....|.+.|. ++|.++|++||+++|+|+++. |. ... ....+. .
T Consensus 187 d~~~l~~~l~~~--~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~-R~G~~ga~~~~gv-~ 261 (433)
T PRK00615 187 DFQIFQTVMNSL--GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF-RVAQGGAAAIYHV-K 261 (433)
T ss_pred CHHHHHHHHHhc--CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-cccHhHHHHhcCC-C
Confidence 788999988632 2467899999999999998874 599999999999999999984 32 111 011111 5
Q ss_pred CcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 289 YDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 289 ~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
+|++++ .|.+|+...+|++++++++
T Consensus 262 PDi~~~--gK~lggG~p~~av~~~~~i 286 (433)
T PRK00615 262 PDITVY--GKILGGGLPAAAVVAHKSI 286 (433)
T ss_pred CCeEEE--cccccCCcceeeeeecHHH
Confidence 788875 5999753336888888887
No 350
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.47 E-value=2.6e-10 Score=124.35 Aligned_cols=364 Identities=14% Similarity=0.099 Sum_probs=193.6
Q ss_pred CCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC-
Q 043646 65 NDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG- 137 (625)
Q Consensus 65 ~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~- 137 (625)
.+..+++..|+ -|+|..+ .|..++.|.+++.+++.... ..+. .....+...++.++|++++...
T Consensus 29 ~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~~ 99 (442)
T TIGR00709 29 QGCWVTDVEGK---EYLDFLAGAGTLALGHNHPNMKQKILDYLQSGL-PLHT-----LDLTTPLKDAFIEALLNIIPKRK 99 (442)
T ss_pred cccEEEeCCCC---EEEEccccHhhhcCCCCCHHHHHHHHHHHHhcc-Cccc-----cccCcHHHHHHHHHHHHhCCCcC
Confidence 34556665553 4888643 36678899999998885321 0111 0112345566778888887532
Q ss_pred CCCcEEE-eCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------Ce
Q 043646 138 QADAIIF-CGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AE 204 (625)
Q Consensus 138 ~~~~vif-t~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~ 204 (625)
....++| +.+|+.+.-.++-.++. . +|.+.+|.....+|.....++...| ..
T Consensus 100 ~~~~~~f~~~sGsEA~e~AlklAr~--------------~-tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~ 164 (442)
T TIGR00709 100 MDYKLQFPGPSGADAVEAAIKLAKT--------------Y-TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPG 164 (442)
T ss_pred CCccEEEeCCCHHHHHHHHHHHHHH--------------h-cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCC
Confidence 1124444 45788874444333331 1 2322234444455555544443322 12
Q ss_pred EEEEecCCCCCC--------CHHH----HHHHHHHh-hhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEE
Q 043646 205 VVEIGLDDNGLL--------DIEA----LRSQLELY-KAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (625)
Q Consensus 205 vv~v~~~~~~~l--------d~~~----L~~~l~~~-~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vi 267 (625)
+..++....... +.+. +++.+... ...+++.+|++..+.+..|.+.+ +++|.++|++||+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI 244 (442)
T TIGR00709 165 VQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLI 244 (442)
T ss_pred cEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 333433211111 1222 33333210 11135788888888888887754 7899999999999999
Q ss_pred EeccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccccccc
Q 043646 268 FDFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY 344 (625)
Q Consensus 268 vD~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (625)
+|+++. +|... ......+. .+|+++++ |.+++...+|+++++++. . ...+... ++|
T Consensus 245 ~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~~G~Pigav~~~~~~-~--~~~~~~~-~~T-------------- 303 (442)
T TIGR00709 245 LDEVQAGFGRSGTMFAFEHAGI-EPDFVVMS--KAVGGGLPLAVLLIAPEF-D--AWQPAGH-TGT-------------- 303 (442)
T ss_pred EeccccCCCCCCchhHHHHcCC-CCcEEEEc--ccccCCcccEEEEEchHH-h--ccCCCcC-CCC--------------
Confidence 999966 33221 11111111 57999865 999764458899988774 1 1111110 111
Q ss_pred ccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCC
Q 043646 345 LEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 345 ~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
..|.|-...++.++++.+ +. +.+.++.+.+.+++.+.|+++. ...+++.. ...+..+.+....+.
T Consensus 304 --------~~gnpla~aaa~a~L~~i--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG~Gl~~~ie~~~~~ 369 (442)
T TIGR00709 304 --------FRGNQLAMVTGTEALNYW--KD---DNLAQNAQERGERITSFLDDMIKEHPCIGNV-RGRGLMQGIMIVDER 369 (442)
T ss_pred --------CCcCHHHHHHHHHHHHHH--Hh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeee-eccceEEEEEEccCc
Confidence 123333333334455544 22 2455566666777777665431 11111111 123445555443221
Q ss_pred CCCCccccccCC-CC--C-ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 424 NSSPENMKIERN-KP--L-HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 424 ~~~~~~~~~~~~-~~--l-~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
.. ..... .. . -...+...+.+ +||.+.+... ..+.+|+.
T Consensus 370 ~~-----~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~-------------------------------~~~~l~~~ 412 (442)
T TIGR00709 370 QS-----KDATGAYPRDCELAAAIQGACFE-NGLLLETGGR-------------------------------EGEVFRLL 412 (442)
T ss_pred cc-----ccccccCCcchHHHHHHHHHHHH-CCeEEeecCC-------------------------------CCCEEEEE
Confidence 00 00000 00 0 02345666644 7998863211 13789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 500 FPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
+++.+|++|++++++++++++.+..
T Consensus 413 Ppl~it~~ei~~~~~~l~~~l~~~~ 437 (442)
T TIGR00709 413 CPITIDQEECEEGISRFKQAVEEAL 437 (442)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987653
No 351
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.47 E-value=1e-10 Score=127.00 Aligned_cols=334 Identities=17% Similarity=0.125 Sum_probs=188.3
Q ss_pred eEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 043646 78 LTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTA 151 (625)
Q Consensus 78 ~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtta 151 (625)
.-|+|..+ .|...+.|.+++.+++.... +.. ...+...++.++|.+.+. .. +.+.|+.+|+.+
T Consensus 53 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~~------~~~~~~~~la~~l~~~~p-~~-~~v~f~~sGseA 121 (428)
T PRK12389 53 NKYIDYLAAYGPIITGHAHPHITKAITEAAENGV---LYG------TPTELEIEFAKMLKEAIP-SL-EKVRFVNSGTEA 121 (428)
T ss_pred CEEEEccccccccccCCCCHHHHHHHHHHHHhCC---ccC------CCCHHHHHHHHHHHHhCC-CC-cEEEEeCCHHHH
Confidence 35888533 34567899999999885421 110 012334567777777765 22 389999888887
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCe-------------------EEEEecCC
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAE-------------------VVEIGLDD 212 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~-------------------vv~v~~~~ 212 (625)
.-..+-.++. . .|...+|......|......+...|.. +..+|
T Consensus 122 ~e~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 183 (428)
T PRK12389 122 VMTTIRVARA--------------Y-TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP--- 183 (428)
T ss_pred HHHHHHHHHH--------------h-hCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC---
Confidence 4444433331 1 232223444455555544444333311 11111
Q ss_pred CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCCcccc--CCCCCC
Q 043646 213 NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVKIN--LRSRNI 286 (625)
Q Consensus 213 ~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~~~id--~~~~~~ 286 (625)
.-|++.+++.+.++ .+++.+|++..+.+..|.+.| +++|.++|++||+++|+|+++...-.... ....+.
T Consensus 184 --~~d~~~l~~~l~~~--~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv 259 (428)
T PRK12389 184 --FNDIEALKEALDKW--GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGV 259 (428)
T ss_pred --CCCHHHHHHHHHhc--CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCC
Confidence 12789999988732 246789999999999999988 99999999999999999999774311100 011111
Q ss_pred CCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCc--ccCCceEEeeccccccccccccchhhhhcCCChhHHHHHH
Q 043646 287 DGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPS--TCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR 364 (625)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~--~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~ 364 (625)
.+|+++++ |.+++...+|++++++++. +.+.+. ...++| ..|.|..+++..
T Consensus 260 -~PDivt~g--K~lggG~Pi~av~~~~~i~--~~~~~~~~~~~~~T----------------------~~gnpl~~Aaal 312 (428)
T PRK12389 260 -EPDLTALG--KIIGGGLPIGAYGGRKDIM--EQVAPLGPAYQAGT----------------------MAGNPASMAAGI 312 (428)
T ss_pred -CCCeeeec--hhhcCCCceeEEeEHHHHH--hhhccCCCcccccC----------------------CccCHHHHHHHH
Confidence 57987665 9997644478888888873 333210 000011 123444444445
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCc-EEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQN-IQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 365 aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~g-v~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
+.++.+ +. +.+.++.+++.+++++.|++ .+. +.+... .+++.+.+..+.... . ......+
T Consensus 313 a~L~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~-----~g~~gi~~~~~~~~~---~--~~~~~~~ 377 (428)
T PRK12389 313 ACLEVL--QQ---EGVYEKLDRLGAMLEEGILEAAEKHGITITINRL-----KGALTVYFTDEKVTN---Y--DQAERSD 377 (428)
T ss_pred HHHHHH--hc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEec-----CcEEEEEEeCCCCCC---h--hhhcccC
Confidence 556555 22 24566777777777777764 332 122221 234333332211000 0 0000001
Q ss_pred ---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHH
Q 043646 440 ---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAAL 516 (625)
Q Consensus 440 ---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL 516 (625)
...+.+.|.+ +||.+.+.. .+.+. +.+.+|++|++++++++
T Consensus 378 ~~~~~~~~~~l~~-~Gv~~~~~~---------------------------------~~~~~--~~l~~t~e~id~~~~~l 421 (428)
T PRK12389 378 GEAFGKFFKLMLN-QGINLAPSK---------------------------------YEAWF--LTTAHTEEDIEETLEAV 421 (428)
T ss_pred HHHHHHHHHHHHH-CCcEeecCC---------------------------------CCCee--ecCCCCHHHHHHHHHHH
Confidence 2356666655 699887421 12233 45678999999999999
Q ss_pred HHHHHh
Q 043646 517 EFIAAY 522 (625)
Q Consensus 517 ~~~~~~ 522 (625)
++++.+
T Consensus 422 ~~~l~~ 427 (428)
T PRK12389 422 DRAFAQ 427 (428)
T ss_pred HHHHHh
Confidence 998754
No 352
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=9.3e-11 Score=128.24 Aligned_cols=364 Identities=12% Similarity=0.058 Sum_probs=195.0
Q ss_pred CCccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCC-
Q 043646 65 NDVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGG- 137 (625)
Q Consensus 65 ~~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~- 137 (625)
.+..+++..|+ -|+|..+ .|...+.|.+++.+++......... .+ ..+...++.+.|.+++...
T Consensus 54 ~G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-~~-----~~~~~~~lae~L~~~~p~~~ 124 (472)
T PRK08742 54 EGAWLVGHDGR---RYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-GF-----THEPAVQLAEQLLAIAPRQD 124 (472)
T ss_pred ccCEEEeCCCC---EEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-cc-----CCHHHHHHHHHHHHhCCCcc
Confidence 34555555553 4888643 3567889999998887542111110 01 1233456777777776431
Q ss_pred ---CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-----------
Q 043646 138 ---QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA----------- 203 (625)
Q Consensus 138 ---~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~----------- 203 (625)
.-+.|.|+.+|+.++-.++-.++.... . .-+++...+|.....+|.....++...|.
T Consensus 125 ~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~-----~----~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~ 195 (472)
T PRK08742 125 GRAPLSKVFYADNGSAGVEVALKMAFHYFH-----N----RGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLL 195 (472)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHHHH-----h----cCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCC
Confidence 123799998898874433322221000 0 00122222344444555554434332221
Q ss_pred -eEEEEecCCC-----C-------CCCHHHHHHHHHHhhhCCCCeEEEEec-ccCccccccC----HHHHHHHHHHcCCE
Q 043646 204 -EVVEIGLDDN-----G-------LLDIEALRSQLELYKAAKRPMLGSFSA-CSNVTGIYSD----TRSIARLLHQYGGF 265 (625)
Q Consensus 204 -~vv~v~~~~~-----~-------~ld~~~L~~~l~~~~~~~~~~lv~~~~-~~n~TG~~~~----l~~I~~la~~~g~~ 265 (625)
.+..+|.... + ..+++.+++.+.. ..+++.+|++.. +....|.+.| ++++.++|++||++
T Consensus 196 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gil 273 (472)
T PRK08742 196 LESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ--SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAF 273 (472)
T ss_pred CCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 1233333211 0 0125666777752 235678888887 4777788755 78999999999999
Q ss_pred EEEeccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeeccccccc
Q 043646 266 ACFDFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 266 vivD~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (625)
+|+|+++. +|-.. ......+. .+|+++++ |.+++.. .+|++++++++.. .+.+... .+.+.
T Consensus 274 lI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~g--Kgl~gG~~Plaav~~~~ei~~--~~~~~~~-~~~~~--------- 338 (472)
T PRK08742 274 LIADEIATGFGRTGTLFACEQAGV-MPDLLCLS--KGLTGGFLPLSAVLATQQLYD--AFLDDSR-ERAFL--------- 338 (472)
T ss_pred EEEechhhCCCCCccchHHHhcCC-CCCEEEEc--ccccCCCCCcceeeccHHHHH--HhhccCc-cCccC---------
Confidence 99999965 33221 11111111 57999997 9996542 4788899988732 2111000 00000
Q ss_pred cccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhC---CCCcEEEeCCCCCCCcceEEEE
Q 043646 342 TLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRIL---PNQNIQVLGNTSVKRQAILSFL 418 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~---~l~gv~v~~~~~~~~~~i~~f~ 418 (625)
...-..|.|-.+++..+.++++ +.. .+.++.+.+.+++.+.+. +.|.+.-+ ..++..+.+.
T Consensus 339 -------h~~T~~gnpl~~Aaa~a~L~~i--~~~---~l~~~~~~~g~~l~~~~~~~~~~~~i~dv----RG~Gl~~gie 402 (472)
T PRK08742 339 -------HSHSYTGNPLACAAALATLDIF--ADD---DVIARNQPTAARMTQLAAQIGEHPHVADV----RQAGMVVAFE 402 (472)
T ss_pred -------cCCCCCccHHHHHHHHHHHHHH--HHC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeE----eccceEEEEE
Confidence 0000123343444444556655 222 344455555555554443 33333111 1133445554
Q ss_pred eccCCCCCCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCC
Q 043646 419 VYSTTNSSPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKP 493 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~ 493 (625)
+..+.. ...... ...+.+.+.+ .||.+++. .
T Consensus 403 l~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~----------------------------------g 438 (472)
T PRK08742 403 LTRGGN---------KRTPFPPAARVGLHAYRAALA-RGVVLRPL----------------------------------G 438 (472)
T ss_pred eccCcc---------ccccCCchhHHHHHHHHHHHH-CCeEEEec----------------------------------C
Confidence 432210 001111 1345666655 69998631 2
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 494 GWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 494 g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
+.|||.+++..|++|+++++++|++++.+.
T Consensus 439 ~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 439 DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 679999999999999999999999988763
No 353
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.46 E-value=2.4e-11 Score=130.74 Aligned_cols=284 Identities=19% Similarity=0.231 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
....++.+..|+.+|++.. .+.+ +||+.+...+..++ +.+||. |++....|-|+..++.+
T Consensus 70 G~i~eAqe~aA~~fgAd~t--yFvv-NGTS~ank~vi~a~---------------~~~GD~--VLvdRN~HKSi~~glil 129 (557)
T COG1982 70 GPIKEAQELAARVFGADHT--YFVV-NGTSTANKAVINAV---------------LTPGDK--VLVDRNCHKSIHHGLIL 129 (557)
T ss_pred ccHHHHHHHHHHHhCCCce--EEEE-CCccHHHHHHHHhh---------------cCCCCE--EEecCCccHHHHHHHHH
Confidence 3567899999999999754 3444 89999999888877 689996 99999999999999999
Q ss_pred cCCeEEEEecCCC------CCCCHHHHHHHHHHhhhCCCC-eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCc
Q 043646 201 SLAEVVEIGLDDN------GLLDIEALRSQLELYKAAKRP-MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (625)
Q Consensus 201 ~G~~vv~v~~~~~------~~ld~~~L~~~l~~~~~~~~~-~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~ 273 (625)
.|+..+++....+ +.++.+.+++++.++ +.- |+++++++ +..|++.++++|.+.++++++|+.+|++|.
T Consensus 130 aGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~---~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~ 205 (557)
T COG1982 130 AGATPVYLEPSRNPLYGIIGGIPLETFKEALLAH---PDAEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHP 205 (557)
T ss_pred cCCceEEecCCCCccccccCCCCHHHHHHHHHhC---hhhheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCc
Confidence 9999999865432 479999999988753 333 77777765 578999999999999999999999999987
Q ss_pred CCCccccCCCC--CCCCCcEEEEcCCCCCCCCCCceEEEEecc-ccccCCCCCcccCCceEEeeccccccccccccchhh
Q 043646 274 GPYVKINLRSR--NIDGYDAIFLATHKFLGGPGTPGILLISKA-LYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEE 350 (625)
Q Consensus 274 ~g~~~id~~~~--~~~~~D~v~~S~hK~lggp~g~G~l~v~~~-~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~ 350 (625)
+-...-++..- ...+.|+++-|.||.+++-.-.+++.+++. .+ + +......-.
T Consensus 206 ~~~~~~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~--~----------------------~~r~nea~~ 261 (557)
T COG1982 206 AHFDFSPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAV--N----------------------HERFNEALM 261 (557)
T ss_pred ccccccccCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccC--C----------------------HHHHHHHHH
Confidence 53322222111 113789999999999987666677777652 10 0 000000011
Q ss_pred hhcCCChhHHHHHHHHHHHH--HHhhcCHHH---HHHHHHHHHHHHHHhhCCCCcEEEeCCCCC-CCcceEEEEeccCCC
Q 043646 351 RENGGTPQIVQMIRAALAFW--VKEYIGYEV---IKKQEDVYIESALGRILPNQNIQVLGNTSV-KRQAILSFLVYSTTN 424 (625)
Q Consensus 351 ~~~~gt~~~~~~~~aal~~~--~~~~~g~~~---i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~-~~~~i~~f~~~~~~~ 424 (625)
.....+|+..-+ |+++.. ..+..|.+. ..+...+.++.+++....++++.++.+... .....-.|.-+.++-
T Consensus 262 ~h~STSPsY~l~--ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~ 339 (557)
T COG1982 262 MHQSTSPSYPLM--ASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQ 339 (557)
T ss_pred HHccCCchHHHH--HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccc
Confidence 122333443332 222221 112334332 245666678888888888888888877520 000011111000000
Q ss_pred C--CCccccc-cCCCCCChHHHHHHhhhhcCeee
Q 043646 425 S--SPENMKI-ERNKPLHGPFVATLFNDLFGIQA 455 (625)
Q Consensus 425 ~--~~~~~~~-~~~~~l~~~~v~~~L~~~~gI~v 455 (625)
- +--+.++ -...|+.+..|.+.|.+ +||..
T Consensus 340 ~~lDP~Klti~tp~~Gipg~~v~~~L~e-~gii~ 372 (557)
T COG1982 340 YFLDPTKLTITTPEFGIPGAIVAKYLRE-HGIIP 372 (557)
T ss_pred eeccccEEEEecCCCCCcHHHHHHHHHH-cCCee
Confidence 0 0001111 12567888899999955 56654
No 354
>PRK07481 hypothetical protein; Provisional
Probab=99.46 E-value=2.7e-10 Score=124.34 Aligned_cols=364 Identities=13% Similarity=0.056 Sum_probs=193.6
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+.+..|+ .|+|..+ .|-..+.|.+++.+++......... . ....+...++.++|+++++-..-
T Consensus 33 G~~l~D~dG~---~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~-~~~~~~~~~lae~L~~~~~~~~~ 104 (449)
T PRK07481 33 GVYVYDIDGK---KLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTF----D-GTTHPRAIELSYELIDMFAPEGM 104 (449)
T ss_pred ccEEEeCCCC---EEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecc----c-ccCCHHHHHHHHHHHHhcCCCCC
Confidence 4555555553 4888643 4566789999999888542111000 0 01224456677788888742222
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------CeEEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AEVVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~vv~ 207 (625)
+.+.|+.+|+++.-.++-.++... +. . -+++...+|.....+|.....++...| ..+..
T Consensus 105 ~~v~f~~sGsEAve~AlklAr~~~-----~~---~-g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~ 175 (449)
T PRK07481 105 RRVFFSSGGSDSVETALKLARQYW-----KV---R-GQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFH 175 (449)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHH-----Hh---c-CCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEE
Confidence 379999888887333332222100 00 0 012332234444455554433332111 11233
Q ss_pred EecCCC-----CCCCHHHH--------HHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEec
Q 043646 208 IGLDDN-----GLLDIEAL--------RSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 208 v~~~~~-----~~ld~~~L--------~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~ 270 (625)
++.... +..|++.+ ++.+.. ...+++.+|++..+....|.+.| +++|.++|++||+++|+|+
T Consensus 176 ~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~-~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DE 254 (449)
T PRK07481 176 VETPWLYRNPFTEQDPEELARICARLLEREIAF-QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADE 254 (449)
T ss_pred eCCCcccccccCCCCHHHHHHHHHHHHHHHHHh-cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEee
Confidence 332210 00144443 333331 12246889999999888898866 8899999999999999999
Q ss_pred cCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeecccccccccccc
Q 043646 271 AAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLE 346 (625)
Q Consensus 271 A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~ 346 (625)
++. +|-.. ......+. .+|+++++ |.+++.. .+|++++++++.. .+.+.....+.+
T Consensus 255 V~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~--~~~~~~~~~~~~--------------- 314 (449)
T PRK07481 255 VVTGFGRTGSWFGSRGWGV-KPDIMCLA--KGITSGYVPLGATMVNARIAD--AFEANADFGGAI--------------- 314 (449)
T ss_pred hhhCcCcCchhhHhhhcCC-CCCEEEEe--ecccCCCcCceEEEEcHHHHH--HHhccCcccccc---------------
Confidence 965 32211 11111111 57999887 9987542 3688999988732 221110000000
Q ss_pred chhhhh-cCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEecc
Q 043646 347 DIEERE-NGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYS 421 (625)
Q Consensus 347 ~~~~~~-~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~ 421 (625)
.... ..|.|-.+++..+.++.+ + .+.+.++.+.+.+++.+.|+++ +.+.-+ ...+..+.+.+..
T Consensus 315 --~h~~T~~gnpl~~aaa~a~L~~l--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rG~Glm~gi~l~~ 383 (449)
T PRK07481 315 --MHGYTYSGHPVACAAALATLDIV--V---REDLPANAAKRGAYLLEGLQPLKERFELVGDV----RGKGLMLALDLVA 383 (449)
T ss_pred --ccCCCCCCCHHHHHHHHHHHHHH--H---hhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEE----eecceEEEEEecc
Confidence 0000 123333333334455554 2 2345566666666776666543 322111 1133444444432
Q ss_pred CCCCCCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEE
Q 043646 422 TTNSSPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWT 496 (625)
Q Consensus 422 ~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~i 496 (625)
+.. ...+.+ ...+...+.+ .||.+++. ...+
T Consensus 384 ~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~----------------------------------g~~i 419 (449)
T PRK07481 384 DKA---------TREPIDPSKGYANAVADVARE-NGVLVRPS----------------------------------GTKI 419 (449)
T ss_pred ccc---------ccCCCCchhHHHHHHHHHHHh-CCeEEEec----------------------------------CCEE
Confidence 110 001111 2346666644 69988631 1458
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 497 RITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 497 Ris~~~~~t~edid~ll~aL~~~~~~ 522 (625)
||++++.+|++|+|+++++|++++.+
T Consensus 420 ~l~Ppl~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 420 ILSPPLVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998865
No 355
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.46 E-value=5.8e-11 Score=129.04 Aligned_cols=341 Identities=13% Similarity=0.074 Sum_probs=185.2
Q ss_pred EeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHH
Q 043646 79 TYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAA 152 (625)
Q Consensus 79 ~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaa 152 (625)
-|+|..+. |..++.|.+++.+++.... +. +. ......++.++|++++.. .+ .+.|+.+|+.+.
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~---~~--~~----~~~~~~~la~~L~~~~~~-~~-~v~~~~sGseA~ 119 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL---SF--GA----PTELEVELAELVIELVPS-IE-MVRMVNSGTEAT 119 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC---cC--CC----CCHHHHHHHHHHHHhCCC-CC-EEEEecCHHHHH
Confidence 47776443 4678899999999886421 11 10 123445677888777632 33 788887788875
Q ss_pred HHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEEEEecC--CCCCCCH
Q 043646 153 IKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVVEIGLD--DNGLLDI 218 (625)
Q Consensus 153 l~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv~v~~~--~~~~ld~ 218 (625)
...+-.++. ....++ +|......|......+...|. ..+.++.+ .--..|+
T Consensus 120 e~Aik~a~~--------------~~g~~~-ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 184 (426)
T PRK00062 120 MSAIRLARG--------------YTGRDK-IIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDL 184 (426)
T ss_pred HHHHHHHHH--------------HhCCCe-EEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCH
Confidence 555443331 111232 344445555543222222111 00000000 0012378
Q ss_pred HHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCCcc-cc-CCCCCCCCCcEE
Q 043646 219 EALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVK-IN-LRSRNIDGYDAI 292 (625)
Q Consensus 219 ~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~~~-id-~~~~~~~~~D~v 292 (625)
+++++.+.+ ..+++.+|+++.+...+|.+.| +++|.++|++||+++++|+++...-.. .- ...++. .+|++
T Consensus 185 ~~l~~~i~~--~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~-~pDi~ 261 (426)
T PRK00062 185 EAVEELFEE--YGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGV-TPDLT 261 (426)
T ss_pred HHHHHHHHh--CCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCC-CcchH
Confidence 999998863 2246789999988888999988 899999999999999999998632110 00 001111 35754
Q ss_pred EEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHH
Q 043646 293 FLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVK 372 (625)
Q Consensus 293 ~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~ 372 (625)
++.|.+++...+|++++++++ .+.+.+. +... .+ .-..+.|.....+.++++.+
T Consensus 262 --~~gK~l~~G~p~ga~~~~~~i--~~~~~~~--~~~~-~~-----------------~T~~~~p~~~aaa~a~L~~~-- 315 (426)
T PRK00062 262 --TLGKIIGGGLPVGAFGGRREI--MEQLAPL--GPVY-QA-----------------GTLSGNPLAMAAGLATLKLL-- 315 (426)
T ss_pred --hhhhHhhCCCcceeeeEHHHH--HHhhccC--CCce-ec-----------------ccCcCCHHHHHHHHHHHHHH--
Confidence 456999743336888888877 3333210 0000 00 00123334444344555554
Q ss_pred hhcCHHHHHHHHHHHHHHHHHhhCC----CCcE-EEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC--CChHHHHH
Q 043646 373 EYIGYEVIKKQEDVYIESALGRILP----NQNI-QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP--LHGPFVAT 445 (625)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~--l~~~~v~~ 445 (625)
+. +.+.++.+.+.+++++.|.+ .+.+ .+- ..+.++.+.+.++.... .. ....+ -....+..
T Consensus 316 ~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vr-----g~G~~~~i~l~~~~~~~---~~-~~~~~~~~~~~~i~~ 383 (426)
T PRK00062 316 KE---PGFYEELEALTKRLAEGLKEAAKKAGIPLTVN-----RVGSMFGLFFTDEPVTN---YA-DAKKSDTERFARFFH 383 (426)
T ss_pred hc---chHHHHHHHHHHHHHHHHHHHHHHcCCceEEE-----EecceEEEEEecCCCcc---hh-hhccccHHHHHHHHH
Confidence 21 13455666666666666643 3221 121 14566666654321000 00 00000 00135777
Q ss_pred HhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 446 LFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 446 ~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.|.+ +||.+.+.. .+.++++ ..+|++|+++++++|++++..
T Consensus 384 ~l~~-~Gv~v~~~~---------------------------------~~~~~~~--~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 384 AMLD-EGVYLAPSQ---------------------------------FEAGFVS--AAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred HHHH-CCeEeecCC---------------------------------cCceeee--ccCCHHHHHHHHHHHHHHHHh
Confidence 7755 799986421 1346665 567999999999999998764
No 356
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.46 E-value=3.2e-10 Score=123.86 Aligned_cols=229 Identities=14% Similarity=0.128 Sum_probs=138.2
Q ss_pred CChHHHHHHHHHhhcCCC---c-cccC----CC------C-----CCceEeccCCC------CCcchHHHHHHHHHhhCC
Q 043646 49 KPSEEKLAWLRSQIIGND---V-EFDY----SF------G-----KRRLTYADHTA------SGRSLRYIEDYIINNVLP 103 (625)
Q Consensus 49 ~~~~~~~~~lr~~~~~~~---~-~~~~----p~------g-----~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~ 103 (625)
......+++.|+.+|+.- . .+.. |. | ....-|+|..+ .|..++.|.+++.+++..
T Consensus 51 ~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~ 130 (474)
T PLN02482 51 TKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKK 130 (474)
T ss_pred hHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhh
Confidence 456788888888888642 1 1111 10 1 12345888643 345678999999998864
Q ss_pred CCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceE
Q 043646 104 FYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWV 183 (625)
Q Consensus 104 ~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~ 183 (625)
.. +.. . ..+...++.++|++.+.. . +.+.|+.+|+.+....+-.++. . .|.+.+
T Consensus 131 ~~---~~~-~-----~~~~~~~lAe~l~~~~p~-~-~~v~f~~SGsEA~e~AlklAR~--------------~-tgr~~I 184 (474)
T PLN02482 131 GT---SFG-A-----PCLLENVLAEMVIDAVPS-V-EMVRFVNSGTEACMGVLRLARA--------------Y-TGREKI 184 (474)
T ss_pred CC---CCC-C-----CCHHHHHHHHHHHHhCCC-C-CEEEEeCChHHHHHHHHHHHHH--------------h-cCCCEE
Confidence 31 111 0 123445667777777753 2 3899998888885554433331 1 232223
Q ss_pred EEEcCCCCchhHHHHHHc-------------CC------eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccC
Q 043646 184 VFLGPYEHHSNLLSWRQS-------------LA------EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN 244 (625)
Q Consensus 184 Vlv~~~~h~s~~~~~~~~-------------G~------~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n 244 (625)
|.....+|......+... |. .+..+|. -|+++|++.+.+ +.+++.+|++..+..
T Consensus 185 i~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~--~~~~iAavI~Epv~g 257 (474)
T PLN02482 185 IKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEA--NKGEIAAVILEPVVG 257 (474)
T ss_pred EEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHh--CCCceEEEEECCCCC
Confidence 333444555332111111 10 1122222 278999998873 234678999999999
Q ss_pred ccccccC----HHHHHHHHHHcCCEEEEeccCcCCCccccC----CCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 245 VTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVKINL----RSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 245 ~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~~~id~----~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
..|.+.| +++|.++|++||+++|+|+++. |. .... ...+. .+|+++++ |.+|+...+|.++.++++
T Consensus 258 ~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-Gf-R~g~~ga~~~~gv-~PDi~t~g--K~lggG~Pigav~g~~ei 331 (474)
T PLN02482 258 NSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GF-RIAYGGAQEYFGI-TPDLTTLG--KVIGGGLPVGAYGGRREI 331 (474)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Ce-ecCcchHhHHhCC-CCCEEEec--chhhCCCceEEEEEcHHH
Confidence 9998877 5689999999999999999985 32 1111 01111 57887765 999764447888888887
No 357
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.45 E-value=2.6e-13 Score=138.54 Aligned_cols=194 Identities=20% Similarity=0.209 Sum_probs=134.5
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchh
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIM 168 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~ 168 (625)
+.+.+.+++.+... +.. ++.......++++++++++|.+ ..+|+.+||.++...+...+
T Consensus 7 ~~~~m~~a~~~a~~------gd~----~Yg~D~~~~~l~~~i~~l~g~e---~a~f~~sGT~An~~al~~~~-------- 65 (290)
T PF01212_consen 7 PTPAMLEAMAAANV------GDD----AYGEDPTTARLEERIAELFGKE---AALFVPSGTMANQLALRAHL-------- 65 (290)
T ss_dssp S-HHEEHHHHHTTS------B-C----CTTSSHHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHHH--------
T ss_pred CCHHHHHHHHcccc------CCc----ccCCChhHHHHHHHHHHHcCCC---EEEEeCCCChHHHHHHHHHH--------
Confidence 44577777755332 111 1233456788999999999986 34688788888666654433
Q ss_pred hhhhhhccCCCCceEEEEcCCCCchhHH--HH-HHcCCeEEEEecCCCCCCCHHHHHHHHHHhh-hCCCCeEEEEecccC
Q 043646 169 RDKLITSLRDEERWVVFLGPYEHHSNLL--SW-RQSLAEVVEIGLDDNGLLDIEALRSQLELYK-AAKRPMLGSFSACSN 244 (625)
Q Consensus 169 ~~~~~~~l~~gd~~~Vlv~~~~h~s~~~--~~-~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~-~~~~~~lv~~~~~~n 244 (625)
+|++. |++....|..+.. +. ...|++++.++.+.+|.+|+++|++++.... +..++++|+++.++|
T Consensus 66 --------~~~~~--vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~ 135 (290)
T PF01212_consen 66 --------RPGES--VICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTE 135 (290)
T ss_dssp --------HTTEE--EEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBT
T ss_pred --------hcCCc--eeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCc
Confidence 46664 8888887765542 22 4479999999977669999999999998632 234689999999988
Q ss_pred cc-ccccC---HHHHHHHHHHcCCEEEEecc---CcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 245 VT-GIYSD---TRSIARLLHQYGGFACFDFA---ASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 245 ~T-G~~~~---l~~I~~la~~~g~~vivD~A---~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
.. |.+.+ +++|.++||+||+.+|+|+| .+..+....++++. .++|++++|++|.++.|.| ++|+.+++.
T Consensus 136 ~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~G-avl~~~~~~ 211 (290)
T PF01212_consen 136 LAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGG-AVLAGNKEF 211 (290)
T ss_dssp TTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSE-EEEEESHHH
T ss_pred CCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccc-eEEEechHH
Confidence 75 77765 67789999999999999998 22222223333221 3899999999999998887 888888885
No 358
>PRK06149 hypothetical protein; Provisional
Probab=99.45 E-value=2.2e-10 Score=136.08 Aligned_cols=347 Identities=14% Similarity=0.094 Sum_probs=199.1
Q ss_pred eEeccCCC----CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 043646 78 LTYADHTA----SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI 153 (625)
Q Consensus 78 ~~Yld~~~----~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal 153 (625)
.-|+|..+ .|-..+.|.+++.+++.....+.. + ..+...++.+++++++....+ .+.|+.||+.++-
T Consensus 585 ~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~---~-----~~~~~~elae~L~~~~p~~~~-~v~f~~SGsEA~e 655 (972)
T PRK06149 585 RSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSR---F-----HYAAVAEFSERLAALAPDGLD-TVFLVNSGSEAND 655 (972)
T ss_pred CEEEECCCCccccCCCCHHHHHHHHHHHHhcccccc---c-----cCHHHHHHHHHHHHhCCCCcC-EEEEeCCchHHHH
Confidence 34777543 344678999999988864322210 1 224456778888888743233 7889888999855
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC-------------eEEEEecCC--CC---C
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA-------------EVVEIGLDD--NG---L 215 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~-------------~vv~v~~~~--~~---~ 215 (625)
.++-.++. . .|.+.+|.+...+|.....+....+. .+..++... .+ .
T Consensus 656 ~AlklAr~--------------~-tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~ 720 (972)
T PRK06149 656 LAIRLAWA--------------A-SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRG 720 (972)
T ss_pred HHHHHHHH--------------h-cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCC
Confidence 55433331 1 23232455555566444322211110 122333221 11 1
Q ss_pred CC-----HHHHHHHHHHh-hhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccC-cCCCccc---cC
Q 043646 216 LD-----IEALRSQLELY-KAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAA-SGPYVKI---NL 281 (625)
Q Consensus 216 ld-----~~~L~~~l~~~-~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~-~~g~~~i---d~ 281 (625)
.+ .+++++.+... ...+++.+|++..+....|.+.+ +++|.++|++||+++|+|+++ ++|-..- ..
T Consensus 721 ~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~ 800 (972)
T PRK06149 721 ADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGF 800 (972)
T ss_pred cccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhh
Confidence 12 34555555421 12246789999999888899988 999999999999999999998 4443221 11
Q ss_pred CCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHH
Q 043646 282 RSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQ 361 (625)
Q Consensus 282 ~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 361 (625)
...+. .+|+++++ |.+|+...+|++++++++. +.+.+. +.+ -.- ..|.|-.++
T Consensus 801 e~~gv-~PDivt~g--K~lg~G~Pl~av~~~~~i~--~~~~~~----~~~-----------------~sT-~~gnP~~~a 853 (972)
T PRK06149 801 EQQGV-VPDIITMA--KGMGNGHPLGAVITRREIA--EALEAE----GYF-----------------FSS-TGGSPVSCR 853 (972)
T ss_pred hhcCC-CCCEEEec--ccccCCeeeEEEEEcHHHH--hhhccC----Ccc-----------------cCC-CCCCHHHHH
Confidence 11112 57998775 9997655579999998873 222210 000 000 134555555
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC
Q 043646 362 MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP 437 (625)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~ 437 (625)
+..+.++.+. . +.+.++.+.+.+++++.|.++ |.+..+. .++..+.+.+..+.... ....
T Consensus 854 aala~L~~i~--~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr----G~Gl~~gvel~~~~~~~-------~~~~ 917 (972)
T PRK06149 854 IGMAVLDVLR--E---EKLQENARRVGDHLKARLEALADRHPLIGAVH----GMGLYLGVELVRDRQTL-------EPAT 917 (972)
T ss_pred HHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe----ecceEEEEEEecCcccC-------CCCh
Confidence 5556666652 2 245666666677777777543 3232221 13344444443211000 0000
Q ss_pred CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHH
Q 043646 438 LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALE 517 (625)
Q Consensus 438 l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~ 517 (625)
-....+++.+.+ +||.+.+.. . ..+.+||.+++.+|++|+|+++++|+
T Consensus 918 ~~~~~i~~~l~~-~Gvl~~~~g-------~------------------------~~~vl~~~Ppl~it~~~id~~~~~l~ 965 (972)
T PRK06149 918 EETAAICDRLLE-LGVIMQPTG-------D------------------------HLNILKIKPPLCLDRESADFFVDMLD 965 (972)
T ss_pred HHHHHHHHHHHh-CCeEEeecC-------C------------------------CCCEEEEECCCcCCHHHHHHHHHHHH
Confidence 012457777765 699986421 0 13689999999999999999999999
Q ss_pred HHHHhh
Q 043646 518 FIAAYG 523 (625)
Q Consensus 518 ~~~~~~ 523 (625)
+++.++
T Consensus 966 ~~l~~~ 971 (972)
T PRK06149 966 RVLTEG 971 (972)
T ss_pred HHHHhh
Confidence 998764
No 359
>PRK06917 hypothetical protein; Provisional
Probab=99.45 E-value=4e-10 Score=122.85 Aligned_cols=365 Identities=13% Similarity=0.060 Sum_probs=196.2
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..|+ -|+|..+ .|...+.|.+++.+++... ++.... ....+...++.++|++++....+
T Consensus 22 G~~l~D~dG~---~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~---~~~~~~---~~~~~~~~~lae~L~~~~p~~~~ 92 (447)
T PRK06917 22 GVYLYDQNGN---KYFDGSSGAVTAGIGHGVKEIADAIKEQAEEV---SFVYRS---QFTSEPAEKLAKKLSDLSPGDLN 92 (447)
T ss_pred eeEEEeCCCC---EEEECchhHHhccCCCCCHHHHHHHHHHHhhC---cCcccc---ccCCHHHHHHHHHHHHhCCCCCC
Confidence 4555555553 4888643 3567899999999988642 111000 01234456788888888754333
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhHHHHHHcCC------------eEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNLLSWRQSLA------------EVV 206 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~~~G~------------~vv 206 (625)
.+.|+.+|+.+.-.++-.++... +.+ -.++.. .|+.- ..+|.....++...+- .+.
T Consensus 93 -~v~f~~sGsEAve~AlklAr~~~-----~~r----g~t~r~-~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 161 (447)
T PRK06917 93 -WSFFVNSGSEANETAMKIAIQHF-----QER----GIQGKH-KILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYP 161 (447)
T ss_pred -EEEEeCChHHHHHHHHHHHHHHH-----Hhc----CCCCCC-EEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCe
Confidence 78998888887443333232100 000 012322 35444 4455544444432221 122
Q ss_pred EEecCCCCC------------CCHHHHHHHHHHhhhCCCCeEEEEecccCc-cccccC----HHHHHHHHHHcCCEEEEe
Q 043646 207 EIGLDDNGL------------LDIEALRSQLELYKAAKRPMLGSFSACSNV-TGIYSD----TRSIARLLHQYGGFACFD 269 (625)
Q Consensus 207 ~v~~~~~~~------------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~-TG~~~~----l~~I~~la~~~g~~vivD 269 (625)
.++...... -+++.+++.+... ..+++.+|++...... -|.+.| +++|.++|++||+++|+|
T Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~-~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~D 240 (447)
T PRK06917 162 TISAPYCYRCPVQKVYPTCQLACATELETAIERI-GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIAD 240 (447)
T ss_pred EeCCCcccccccCCChHHHHHHHHHHHHHHHHhc-CCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEe
Confidence 222111000 1245667777631 1135788888877654 356654 789999999999999999
Q ss_pred ccCcC-CCcccc--CCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc---ccCCceEEeecccccccc
Q 043646 270 FAASG-PYVKIN--LRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS---TCGGGTVNYVNAFDEKDT 342 (625)
Q Consensus 270 ~A~~~-g~~~id--~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~---~~ggg~v~~~~~~~~~~~ 342 (625)
+++.. |-...- ....+. .+|+++++ |.+++.. .+|++++++++.. .+.+. ...++|
T Consensus 241 Ev~tGfGRtG~~~a~~~~gv-~PDi~~~g--K~l~~G~~Pi~a~~~~~~i~~--~~~~~~~~~~~~~T------------ 303 (447)
T PRK06917 241 EVMTGLGRTGAMFAMEHWGV-EPDIMTLG--KGLGAGYTPIAATVVSDRVME--PILRGSRSIMSGHT------------ 303 (447)
T ss_pred chhhCcCcccchhhHHhcCC-CCCEEEee--ehhccCCcceEEEEEcHHHHH--HHhccCcccccccC------------
Confidence 99762 211110 011111 57988776 9997543 3688888888732 22110 001111
Q ss_pred ccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEE
Q 043646 343 LYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFL 418 (625)
Q Consensus 343 ~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~ 418 (625)
..|.|..+++..+.++.+ +. +.+.++...+.+++.+.|.++ |.+.-+ ...+.++.+.
T Consensus 304 ----------~~gnpl~~aaa~a~l~~l--~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rG~Gl~~~ie 364 (447)
T PRK06917 304 ----------LSANPLSAATALAVLEYM--EK---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDV----RGKGLLIGVE 364 (447)
T ss_pred ----------CCCCHHHHHHHHHHHHHH--HH---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEE----eecceEEEEE
Confidence 123343444444555554 22 234556666666666666543 322111 1134455554
Q ss_pred eccCCCCCCccccccCCCCC-----ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCC
Q 043646 419 VYSTTNSSPENMKIERNKPL-----HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKP 493 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l-----~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~ 493 (625)
+..+.. ..... ....+...+.+ +||.+.+.... ..|...
T Consensus 365 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~--------------------------~~g~~~ 408 (447)
T PRK06917 365 FVADKK---------TKQPFSKSQAVASELISVAAK-NGLLLYPAVAG--------------------------QDGKEG 408 (447)
T ss_pred EeccCC---------cCCCCcchhHHHHHHHHHHHh-CCcEEEecccc--------------------------cCCCCC
Confidence 432210 00011 12356666655 79998742110 001123
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 494 GWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 494 g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
+.+|+++++.+|++|+|+++++|.+++.+.
T Consensus 409 ~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 409 DAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999988764
No 360
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.43 E-value=1.4e-10 Score=121.12 Aligned_cols=199 Identities=16% Similarity=0.195 Sum_probs=132.9
Q ss_pred EeccCCCC-C-----cchHHHHHHHHHhhCC--CCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHH
Q 043646 79 TYADHTAS-G-----RSLRYIEDYIINNVLP--FYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTT 150 (625)
Q Consensus 79 ~Yld~~~~-~-----~~p~~v~ea~~~~l~~--~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtt 150 (625)
-|.|+..+ + ..++.|.+++.+.+.. .++. .++..-++.+.|.+.+..- +.|-|++|||.
T Consensus 54 ~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~-----------Pte~Ei~~Aell~~~~p~~--e~vrfvnSGTE 120 (432)
T COG0001 54 EYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGA-----------PTELEVELAELLIERVPSI--EKVRFVNSGTE 120 (432)
T ss_pred EeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCC-----------CCHHHHHHHHHHHHhcCcc--cEEEEecchhH
Confidence 47776432 2 3478899999998853 1222 2344555668888888763 27889989999
Q ss_pred HHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC--C-----------------eEEEEecC
Q 043646 151 AAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL--A-----------------EVVEIGLD 211 (625)
Q Consensus 151 aal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G--~-----------------~vv~v~~~ 211 (625)
|.+..+-.+++.. ..++ +|.+...+|...-..+...| + .++.+|.+
T Consensus 121 AtmsAiRlARa~T--------------gR~k-IikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN 185 (432)
T COG0001 121 ATMSAIRLARAYT--------------GRDK-IIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN 185 (432)
T ss_pred HHHHHHHHHHHhh--------------CCCe-EEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC
Confidence 9887776655422 2232 45555566655543333222 1 34445544
Q ss_pred CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCCCcccc-CCCC-C
Q 043646 212 DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGPYVKIN-LRSR-N 285 (625)
Q Consensus 212 ~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g~~~id-~~~~-~ 285 (625)
|++.+++++++ .+++..+|++..+...-|.+.| +++|.++|+++|+++|+|++...--.... ...+ +
T Consensus 186 -----D~~al~~~~~~--~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~g 258 (432)
T COG0001 186 -----DLEALEEAFEE--YGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYG 258 (432)
T ss_pred -----CHHHHHHHHHH--cCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccC
Confidence 89999999984 3457889999999988999977 68899999999999999998542211110 0010 0
Q ss_pred CCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 286 IDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 286 ~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
. .+|+.+++ |.+||...+|++-.++++
T Consensus 259 i-~PDlttlG--KiIGGGlP~ga~gGr~ei 285 (432)
T COG0001 259 V-EPDLTTLG--KIIGGGLPIGAFGGRAEI 285 (432)
T ss_pred c-Ccchhhhh--hhhcCCcceeeeccHHHH
Confidence 1 45777666 999887778999999998
No 361
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.43 E-value=4.2e-11 Score=126.39 Aligned_cols=361 Identities=16% Similarity=0.089 Sum_probs=205.1
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCC-CCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPF-YGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ 138 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~-~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~ 138 (625)
+..+.+..|+ -|+|..++ |-..+.+.+++.+++... +.++.. .+.+...++.++|+++..-..
T Consensus 35 G~yl~d~~G~---r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~-------~t~~Pa~~LA~~L~~~aP~~~ 104 (449)
T COG0161 35 GVYLTDIDGR---RYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGG-------FTHEPAIELAEKLAELAPEGG 104 (449)
T ss_pred eeEEEeCCCC---EEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcc-------cCCchHHHHHHHHHHhCCCCC
Confidence 3455555453 47885543 334678999999888543 111211 112225667888888888432
Q ss_pred CCcEEEeCChHHH---HHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcC------------
Q 043646 139 ADAIIFCGAGTTA---AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSL------------ 202 (625)
Q Consensus 139 ~~~vift~sGtta---al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G------------ 202 (625)
=+.|.|++|||++ +|+.+.+-.... =+|+ +..++. ...+|.+...++...|
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~------------G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~l 171 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRAR------------GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPL 171 (449)
T ss_pred ccEEEEeCCchHHHHHHHHHHHHHHHhc------------CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhcccc
Confidence 2389999999988 666665544211 1233 333444 4556666554433222
Q ss_pred -CeEEEEecCC------CCC------CCHHHHHHHHHHhhhCCCCeEEEEecccCc-cccccC----HHHHHHHHHHcCC
Q 043646 203 -AEVVEIGLDD------NGL------LDIEALRSQLELYKAAKRPMLGSFSACSNV-TGIYSD----TRSIARLLHQYGG 264 (625)
Q Consensus 203 -~~vv~v~~~~------~~~------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~-TG~~~~----l~~I~~la~~~g~ 264 (625)
..+..++... .+. -..++|++.|.++ ..++..++++..+..- .|.+.| +++|.++|++||+
T Consensus 172 l~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~-g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~I 250 (449)
T COG0161 172 LPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH-GPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGI 250 (449)
T ss_pred ccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc-CcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCc
Confidence 1222333221 111 2356677777742 1145678888887777 788766 7899999999999
Q ss_pred EEEEeccC-cCCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCcccCCceEEeecccccc
Q 043646 265 FACFDFAA-SGPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEK 340 (625)
Q Consensus 265 ~vivD~A~-~~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (625)
++|+|++- ++|-.. +.....+. .+|+++++ |.+.+.+ .+|.++++++++. .+..-. .+.+
T Consensus 251 LlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~--~~~~~~--~~~f--------- 314 (449)
T COG0161 251 LLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDRIYE--AFSDGD--AGAF--------- 314 (449)
T ss_pred EEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHHHHH--HHhccc--CCee---------
Confidence 99999983 333211 11111111 57999988 9885443 3788888888843 211000 1110
Q ss_pred ccccccchhhhh-cCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC-CCcEEEeCCCCCCCcceEEEE
Q 043646 341 DTLYLEDIEERE-NGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP-NQNIQVLGNTSVKRQAILSFL 418 (625)
Q Consensus 341 ~~~~~~~~~~~~-~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~-l~gv~v~~~~~~~~~~i~~f~ 418 (625)
...+ ..|.|-.++...+.++++ + .+.+.++.+.+..++.+.|.+ +++...++.. ...+-+..+.
T Consensus 315 --------~HG~TYsghPlacAaAla~L~i~--e---~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV-R~~Gli~~iE 380 (449)
T COG0161 315 --------MHGHTYSGNPLACAAALANLDIL--E---EEDLLERVAEIGAYLQAGLQAALADHPLVGDV-RGLGLIGAIE 380 (449)
T ss_pred --------ccCCccccCHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHhcccCCcEEEe-eccceEEEEE
Confidence 0111 123343344444555555 2 235666777777788887775 3322233321 1123344444
Q ss_pred eccCCCCCCccccccCCCCCC---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcE
Q 043646 419 VYSTTNSSPENMKIERNKPLH---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGW 495 (625)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~l~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~ 495 (625)
+..+.. ...++. ...+.+.+.+ .|+.+|+. ...
T Consensus 381 lv~d~~---------t~~~f~~~~~~~~~~~~~e-~Gl~iRp~----------------------------------g~~ 416 (449)
T COG0161 381 LVADKA---------TKTPFEARVGARVRAAALE-RGLLIRPL----------------------------------GDV 416 (449)
T ss_pred Eecccc---------cccchhhhHHHHHHHHHHH-CCeEEeec----------------------------------CCE
Confidence 443321 011111 2345555644 79999953 146
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHhhh
Q 043646 496 TRITFPYYMSNEEFEFILAALEFIAAYGH 524 (625)
Q Consensus 496 iRis~~~~~t~edid~ll~aL~~~~~~~~ 524 (625)
+=+++++..|++|++++++++++.+.+..
T Consensus 417 i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 417 IYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred EEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999987643
No 362
>PRK07483 hypothetical protein; Provisional
Probab=99.43 E-value=3.8e-10 Score=122.82 Aligned_cols=365 Identities=13% Similarity=0.070 Sum_probs=197.0
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCC-CCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFY-GNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ 138 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~-~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~ 138 (625)
+..+++..| .-|+|..+ .|..++.|.+++.+++.... .++.. ...+...++.++|++++....
T Consensus 21 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~-------~~~~~~~~lae~L~~~~p~~~ 90 (443)
T PRK07483 21 GIYLIDATG---KRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSF-------FTTEPAEALADRLVAAAPAGL 90 (443)
T ss_pred EEEEEeCCC---CEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccc-------cCCHHHHHHHHHHHHhCCCCC
Confidence 455555545 34888654 45678899999999886431 11110 112344567778887765333
Q ss_pred CCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCC------------eEE
Q 043646 139 ADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLA------------EVV 206 (625)
Q Consensus 139 ~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~------------~vv 206 (625)
+ .+.|+.+|+.+.-.++-.++.... . . -+++...+|.....+|.....++...|- .+.
T Consensus 91 ~-~v~f~~sGsEAve~AlklAr~~~~-----~---~-g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 160 (443)
T PRK07483 91 E-HVYFVSGGSEAVEAALKLARQYFV-----E---I-GQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAH 160 (443)
T ss_pred C-EEEEcCCcHHHHHHHHHHHHHHHH-----h---c-CCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCE
Confidence 3 799998888873333322221000 0 0 0133222344455566655444432211 122
Q ss_pred EEecCCCCC-C------------CHHHHHHHHHHhhhCCCCeEEEEecccC-ccccccC----HHHHHHHHHHcCCEEEE
Q 043646 207 EIGLDDNGL-L------------DIEALRSQLELYKAAKRPMLGSFSACSN-VTGIYSD----TRSIARLLHQYGGFACF 268 (625)
Q Consensus 207 ~v~~~~~~~-l------------d~~~L~~~l~~~~~~~~~~lv~~~~~~n-~TG~~~~----l~~I~~la~~~g~~viv 268 (625)
.++...... . .++++++++.. ...+++.+|++..+.. ..|.+.| +++|.++|++||+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~ 239 (443)
T PRK07483 161 HVSPCYAYREQRAGESDEAYGQRLADELEAKILE-LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLIL 239 (443)
T ss_pred EeCCCccccccccCCCHHHHHHHHHHHHHHHHHh-cCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEE
Confidence 333211000 0 12556665542 1224678888888775 3577765 78999999999999999
Q ss_pred eccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCC-CceEEEEeccccccCCCCCc---ccCCceEEeeccccccc
Q 043646 269 DFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPG-TPGILLISKALYQLGSSPPS---TCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 269 D~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~-g~G~l~v~~~~~~l~~~~p~---~~ggg~v~~~~~~~~~~ 341 (625)
|+++. +|-.. ......+. .+|+++++ |.+++.. .+|++++++++.+ .+.+. ...++|
T Consensus 240 DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~--~~~~~~~~~~h~~T----------- 303 (443)
T PRK07483 240 DEVMCGMGRTGTLFACEEDGV-APDLVTIA--KGLGAGYQPIGAVLASDRIYD--AIADGSGFFQHGHT----------- 303 (443)
T ss_pred ecceeCcccCcHHHHHhhcCC-CCCeeeeh--hhhccCccccEEEEEcHHHHH--HHhcCCCccccCCC-----------
Confidence 99965 32211 00111111 57999886 9987653 4799999988732 22110 001111
Q ss_pred cccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEE
Q 043646 342 TLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSF 417 (625)
Q Consensus 342 ~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f 417 (625)
..|.|-.+.+..+.++.+. . +.+.++...+.+++.+.|++ .|.+.-+ ..++..+.+
T Consensus 304 -----------~~gnpl~~aaa~a~l~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----RG~Glm~gi 363 (443)
T PRK07483 304 -----------YLGHATACAAALAVQRVIA--E---DGLLANVRARGEQLRARLRERLGQHPHVGDI----RGRGLFVGV 363 (443)
T ss_pred -----------CCCCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeE----eecccEEEE
Confidence 1233333344445555552 2 24555666666666666643 3322111 113445555
Q ss_pred EeccCCCCCCccccccCCCCCC-----hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCC
Q 043646 418 LVYSTTNSSPENMKIERNKPLH-----GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVK 492 (625)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~l~-----~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~ 492 (625)
.+..+.. ...+.+ ...+.+.+.+ +||.+.+...+. +|..
T Consensus 364 e~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~~~~~--------------------------~~~~ 407 (443)
T PRK07483 364 ELVADRA---------TKAPFDPALKLHARIKREAMA-RGLMVYPMGGTI--------------------------DGVR 407 (443)
T ss_pred EEeeccc---------ccCCCCchhhHHHHHHHHHHH-CCcEEEecCccc--------------------------cCCC
Confidence 4432210 000110 2356666655 799987421110 0001
Q ss_pred CcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 493 PGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 493 ~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
++.+|+.+++..|++|+|+++++|++++.+.
T Consensus 408 ~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 408 GDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999988653
No 363
>PRK06148 hypothetical protein; Provisional
Probab=99.42 E-value=2.2e-10 Score=136.06 Aligned_cols=345 Identities=17% Similarity=0.155 Sum_probs=197.0
Q ss_pred eEeccC----CCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHH
Q 043646 78 LTYADH----TASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAI 153 (625)
Q Consensus 78 ~~Yld~----~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal 153 (625)
.-|+|. ...|-..+.|.+++.+++... +.++. + ..+...++.++|++.+...-+ .+.|+.||+.|+-
T Consensus 624 ~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l--~~~~~-~-----~~~~~~~lAe~L~~~~p~~~~-~v~f~nSGsEA~e 694 (1013)
T PRK06148 624 RAYLDCFNNVCHVGHAHPRVVAAAARQAARL--NTNTR-Y-----LHDAIVAYAERLTATLPDGLT-VAFFVNSGSEANS 694 (1013)
T ss_pred CEEEEcccChhhcCCCCHHHHHHHHHHHhhc--CCcCC-c-----CCHHHHHHHHHHHHhCCCCcC-EEEEeCCcHHHHH
Confidence 458886 345667889999999988653 22221 1 133455677777777753333 7899988988844
Q ss_pred HHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------CeEEEEecCC--CCC---C
Q 043646 154 KRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AEVVEIGLDD--NGL---L 216 (625)
Q Consensus 154 ~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~vv~v~~~~--~~~---l 216 (625)
.++-.++. -.|.+.+|.....+|.....++...+ ..+..++... ... .
T Consensus 695 ~AlklAr~---------------~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 759 (1013)
T PRK06148 695 LALRLARA---------------HTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWP 759 (1013)
T ss_pred HHHHHHHH---------------hcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCC
Confidence 44433331 12333244444555554433222111 1122222110 000 1
Q ss_pred C-------HHHHHHHHHHh-hhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCcc---cc
Q 043646 217 D-------IEALRSQLELY-KAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVK---IN 280 (625)
Q Consensus 217 d-------~~~L~~~l~~~-~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~---id 280 (625)
+ .+.+++.+..- ...+.+.+|++..+....|.+.| +++|.++|++||+++|+|+++. +|-.. ..
T Consensus 760 ~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a 839 (1013)
T PRK06148 760 DAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWA 839 (1013)
T ss_pred hhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchh
Confidence 1 13455555421 11246889999988888898877 8999999999999999999974 33221 11
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHH
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIV 360 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 360 (625)
....+. .+|+++++ |.+|+...+|++++++++. +.+.+....++| ..|.|-.+
T Consensus 840 ~e~~gv-~PDivt~g--K~lggG~Plgav~~~~ei~--~~~~~g~~~~~T----------------------f~gnpla~ 892 (1013)
T PRK06148 840 FETQGV-VPDIVTMG--KPIGNGHPMGAVVTTREIA--DSFDNGMEYFNT----------------------FGGNPVSC 892 (1013)
T ss_pred hhhcCC-Ccceeeec--ccccCCcceEEEEEcHHHH--hhccCCCccccC----------------------CCCCHHHH
Confidence 111111 57998886 9997766689999998883 222211000011 12334444
Q ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcE-EEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 361 QMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNI-QVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 361 ~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv-~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
++..+.++.+ + .+.+.++.+++.+++++.|+++ |.+ .+-+ .+..+.+.+..+.. ..
T Consensus 893 aaa~a~L~~i--~---~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG-----~Gl~~gvel~~~~~---------~~ 953 (1013)
T PRK06148 893 AIGLAVLDII--E---DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRG-----MGLFLGIELVTDRK---------TK 953 (1013)
T ss_pred HHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEee-----eceEEEEEecCCcc---------cc
Confidence 4444555554 2 2245566667777777776543 322 1211 23444444432210 00
Q ss_pred CC--CChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHH
Q 043646 436 KP--LHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFIL 513 (625)
Q Consensus 436 ~~--l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll 513 (625)
.+ -....+...+.+ +||.+.+. + + ....+||.+++.+|++|+|+++
T Consensus 954 ~~~~~~~~~i~~~~~~-~Gvl~~~~---g-~---------------------------~~~vlr~~Ppl~it~~~id~~l 1001 (1013)
T PRK06148 954 APATAIARYVKNGARE-RGILIGTE---G-P---------------------------HDNVLKIRPPLIFSRADADHLL 1001 (1013)
T ss_pred CccHHHHHHHHHHHHh-CCeEEecc---C-C---------------------------CCCEEEEeCCccCCHHHHHHHH
Confidence 00 012356666755 79998631 1 1 1378999999999999999999
Q ss_pred HHHHHHHHhhh
Q 043646 514 AALEFIAAYGH 524 (625)
Q Consensus 514 ~aL~~~~~~~~ 524 (625)
++|++++.+.+
T Consensus 1002 ~~l~~~l~~~~ 1012 (1013)
T PRK06148 1002 EVLDDVLAAAL 1012 (1013)
T ss_pred HHHHHHHHHHh
Confidence 99999987643
No 364
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=1e-10 Score=118.07 Aligned_cols=323 Identities=14% Similarity=0.041 Sum_probs=187.1
Q ss_pred chHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC-CcEEEeCChHHHHHHHHHHHhcccccch
Q 043646 89 SLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA-DAIIFCGAGTTAAIKRLQEVMGITVPSI 167 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~-~~vift~sGttaal~~l~~~l~~~~~~~ 167 (625)
-|..+++.....+....+ ..+.|..+.+..-+.+.+.+.|.+.=|.+.+ +.|.+| +|++.++..++..+.
T Consensus 87 fp~Dai~RA~~~L~~~gG--s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT-~GAS~ai~~il~l~~------ 157 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGG--SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLT-TGASPAIRSILSLLI------ 157 (475)
T ss_pred CCHHHHHHHHHHHHhcCC--cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeec-CCCcHHHHHHHHHHh------
Confidence 455666665555544333 3333434444444455555555555553221 267777 789998999888773
Q ss_pred hhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc
Q 043646 168 MRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSACSNV 245 (625)
Q Consensus 168 ~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~ 245 (625)
-.+.+. |+++-+-|+-+-..+...|+..+.+-+++ ++.+|.++|++.+.+.+..-+++++++-+|-||
T Consensus 158 --------~~~~~G--vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNP 227 (475)
T KOG0258|consen 158 --------AGKKTG--VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNP 227 (475)
T ss_pred --------cCCCCc--eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCc
Confidence 124444 99999999988878888898887777776 679999999999987664457899999999999
Q ss_pred ccccc---CHHHHHHHHHHcCCEEEEeccCc-----CCCcccc-------CCCCCCCCCcEEE-EcCCCCCCC---CCCc
Q 043646 246 TGIYS---DTRSIARLLHQYGGFACFDFAAS-----GPYVKIN-------LRSRNIDGYDAIF-LATHKFLGG---PGTP 306 (625)
Q Consensus 246 TG~~~---~l~~I~~la~~~g~~vivD~A~~-----~g~~~id-------~~~~~~~~~D~v~-~S~hK~lgg---p~g~ 306 (625)
||.+. .+++|..+|+++|++++.|+++- .+..... |.....+.+-.++ .|.||.+.| +.|
T Consensus 228 TGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG- 306 (475)
T KOG0258|consen 228 TGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG- 306 (475)
T ss_pred cchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-
Confidence 99984 47889999999999999999832 1111111 1111011222233 256777632 333
Q ss_pred eEEEEeccc-------cccCC--CCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCH
Q 043646 307 GILLISKAL-------YQLGS--SPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGY 377 (625)
Q Consensus 307 G~l~v~~~~-------~~l~~--~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~ 377 (625)
|++=+-+.. .++.. +.|...|---++.+ ...-..|.+++-... .+ .
T Consensus 307 GYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~--------------VnPP~Pgd~Sy~~~~--------~E---k 361 (475)
T KOG0258|consen 307 GYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLV--------------VNPPKPGDPSYDLFS--------SE---K 361 (475)
T ss_pred CeeecccCChhHHHHHHHHHhhhhcCCccchhhhcee--------------cCCCCCCCcchhhhh--------hh---h
Confidence 555332111 00000 11111110000000 000011222222211 12 2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCCh-HHHHHHhhhhcCeeee
Q 043646 378 EVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHG-PFVATLFNDLFGIQAR 456 (625)
Q Consensus 378 ~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~-~~v~~~L~~~~gI~v~ 456 (625)
+.|.+..+..++.+.+.++.++|+.+..+ +++.+.|-...-... ...-.+..++.+ .+.+..|++.-||.+.
T Consensus 362 d~il~~l~~ra~l~~~~~ns~~gi~cn~~----qGAMY~fP~i~lP~k---aie~A~~~~~~PD~FYc~~LLe~tGIcvV 434 (475)
T KOG0258|consen 362 DGILSSLRSRAKLTEDAFNSLEGISCNPV----QGAMYLFPQISLPPK---AIEAAKALGIAPDEFYCLKLLEATGICVV 434 (475)
T ss_pred HhHHHHHHHHhHHHHHHHhhcCceeeccC----ccceeecccccCCHH---HHHHHHHhCCCCcHHHHHHHHHhcCeEEe
Confidence 34555566667888999999999998766 456666643221100 000012233333 4567788899999999
Q ss_pred cCCCCCc
Q 043646 457 GGCACAG 463 (625)
Q Consensus 457 ~G~~~~~ 463 (625)
+|+.|+.
T Consensus 435 PGSGFGQ 441 (475)
T KOG0258|consen 435 PGSGFGQ 441 (475)
T ss_pred cCCCCCC
Confidence 9998874
No 365
>PRK07046 aminotransferase; Validated
Probab=99.41 E-value=2.9e-10 Score=123.92 Aligned_cols=227 Identities=14% Similarity=0.072 Sum_probs=138.2
Q ss_pred CChHHHHHHHHHhhcCCC-c----cccCCC--------C-----CCceEeccCCC------CCcchHHHHHHHHHhhCCC
Q 043646 49 KPSEEKLAWLRSQIIGND-V----EFDYSF--------G-----KRRLTYADHTA------SGRSLRYIEDYIINNVLPF 104 (625)
Q Consensus 49 ~~~~~~~~~lr~~~~~~~-~----~~~~p~--------g-----~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~ 104 (625)
..+...+++.|+.+|+.. . .+..|+ | ....-|+|..+ .|...+.|.+++.+++...
T Consensus 28 ~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~ 107 (453)
T PRK07046 28 PRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG 107 (453)
T ss_pred hhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhC
Confidence 345677788888887642 1 111122 1 12345888532 3455689999999988542
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEE
Q 043646 105 YGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVV 184 (625)
Q Consensus 105 ~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~V 184 (625)
. ... ...+...++.+.|++.++. + .|.|+.|||.+...++-.++. . .|.+.+|
T Consensus 108 ~---~~~------~~~~~~~~lAe~l~~~~~~--~-~v~F~nSGtEA~e~AlrlAR~--------------~-TGr~~ii 160 (453)
T PRK07046 108 L---TTM------LPSEDAAWVGEELARRFGL--P-YWQVATTATDANRFVLRWARA--------------V-TGRPKIL 160 (453)
T ss_pred C---CCC------CCCHHHHHHHHHHHHHhCC--C-EEEEECCHHHHHHHHHHHHHH--------------h-hCCCEEE
Confidence 1 110 0124455677778787752 3 799998999886655544442 1 2322233
Q ss_pred EEcCCCCchhHHHHHH--c----------CC------eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc
Q 043646 185 FLGPYEHHSNLLSWRQ--S----------LA------EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT 246 (625)
Q Consensus 185 lv~~~~h~s~~~~~~~--~----------G~------~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T 246 (625)
-....+|......+.. . |. .+..++. -|++++++.+.. ++..+|++.......
T Consensus 161 ~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~----~~vAavi~EPi~g~~ 231 (453)
T PRK07046 161 VFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALAD----GDVAAVLAEPAMTNI 231 (453)
T ss_pred EECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhCC----CCeEEEEECCCCCCC
Confidence 3444455542211111 0 11 1122221 278999988852 468899999888888
Q ss_pred ccccC----HHHHHHHHHHcCCEEEEeccCcC--CCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 247 GIYSD----TRSIARLLHQYGGFACFDFAASG--PYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 247 G~~~~----l~~I~~la~~~g~~vivD~A~~~--g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
|.+.| +++|.++|++||+++|+|+++.+ |.-... ..++. .+|+++++ |.+|+...+|++++++++
T Consensus 232 G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~-~~~gv-~PDi~t~g--K~lggG~Pi~av~g~~~i 302 (453)
T PRK07046 232 GMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT-RAHGL-EPDFLVVG--KPIAGGVPCAVYGFSAEL 302 (453)
T ss_pred CCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh-HHhCC-Cccceeeh--hhhcCCCcceeeeehHHH
Confidence 88866 79999999999999999999852 111110 11111 57988865 999765568999999887
No 366
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.40 E-value=7e-10 Score=121.31 Aligned_cols=361 Identities=15% Similarity=0.097 Sum_probs=194.0
Q ss_pred CccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC-
Q 043646 66 DVEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ- 138 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~- 138 (625)
+..+++..| ..|+|..+ .|..++.|.+++.+++...... +.. ....+...++.+++.+.+...-
T Consensus 54 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~-~~~-----~~~~~~~~~la~~L~~~~p~~~~ 124 (464)
T PRK06938 54 GIYVEDVEG---RQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPL-HTL-----DLTTPVKDQFVQDLFASLPEAFA 124 (464)
T ss_pred ccEEEeCCC---CEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcc-ccc-----ccCCHHHHHHHHHHHHhCccccc
Confidence 344555544 35888633 3566889999999888431111 000 0112334445566666654221
Q ss_pred -CCcEEEe-CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcC------------Ce
Q 043646 139 -ADAIIFC-GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSL------------AE 204 (625)
Q Consensus 139 -~~~vift-~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G------------~~ 204 (625)
.+.+.|+ .+|+.+.-.++-.++. -+|.+.+|.+...+|.....++...| ..
T Consensus 125 ~~~~v~f~~~SGSEAve~AlklAr~---------------~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~ 189 (464)
T PRK06938 125 REAKIQFCGPTGTDAVEAALKLVKT---------------ATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPG 189 (464)
T ss_pred ccceEEEeCCCcHHHHHHHHHHHHH---------------hhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCC
Confidence 1256665 4788874433332321 12333234444455555443333222 12
Q ss_pred EEEEecCCCCC------------CCHHHHHHHHHHhhh-CCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEE
Q 043646 205 VVEIGLDDNGL------------LDIEALRSQLELYKA-AKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (625)
Q Consensus 205 vv~v~~~~~~~------------ld~~~L~~~l~~~~~-~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vi 267 (625)
+..+|...... .+++.+++.+.+... .+++.+|++..+....|.+.| +++|.++|++||+++|
T Consensus 190 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI 269 (464)
T PRK06938 190 VQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLI 269 (464)
T ss_pred cEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 34444332111 135677877763211 125789999988887788765 7899999999999999
Q ss_pred EeccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccccccc
Q 043646 268 FDFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY 344 (625)
Q Consensus 268 vD~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (625)
+|+++. +|-.. .....++. .+|+++++ |.+++...+|++++++++ ....+.. .++|
T Consensus 270 ~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~g--KglggG~PlsAv~~~~~~---~~~~~~~-~~~T-------------- 328 (464)
T PRK06938 270 VDEIQSGFGRTGKMFAFEHAGI-IPDVVVLS--KAIGGSLPLAVVVYREWL---DTWQPGA-HAGT-------------- 328 (464)
T ss_pred EeccccCCCcCcHHHHHHhcCC-CCCEEEee--ccccCCCceEEEeehhHh---hccCCCC-CCCC--------------
Confidence 999965 32111 11111111 57999997 998765557888887764 1221111 1111
Q ss_pred ccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCC
Q 043646 345 LEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 345 ~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
..|.|-.+++..+.++.+. .+.+.++.+.+.+++.+.|.++. ...+++.. ...+..+.+.+..+.
T Consensus 329 --------~~gnpla~Aaa~a~L~~l~-----~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V-rG~Glm~gie~~~~~ 394 (464)
T PRK06938 329 --------FRGNQMAMAAGSATLRYIK-----EHRLAEHAAAMGERLREHLRQLQRDYPQLGDV-RGRGLMLGVEIVDPQ 394 (464)
T ss_pred --------CCcCHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHHHHhCCCeeee-eccceEEEEEeccCc
Confidence 1233433444445555542 23556677777777777765431 11111111 113344444443221
Q ss_pred CCCCccccccC-CCCCC---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 424 NSSPENMKIER-NKPLH---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 424 ~~~~~~~~~~~-~~~l~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
.. .... ....+ ...+...+.+ +||.+.++.. ..+.+|+.
T Consensus 395 ~~-----~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~g~-------------------------------~~~~l~~~ 437 (464)
T PRK06938 395 GE-----PDALGHPPANGELASLIQRECLR-RGLILELGGR-------------------------------HGSVVRFL 437 (464)
T ss_pred cc-----ccccccCCccHHHHHHHHHHHHH-CCeEEeecCC-------------------------------CCCEEEEE
Confidence 00 0000 00001 2345666654 7998864210 12679999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Q 043646 500 FPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~~~~ 522 (625)
+++.+|++|++++++++++++.+
T Consensus 438 Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 438 PPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred CCCccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998865
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.38 E-value=3.6e-10 Score=122.80 Aligned_cols=358 Identities=13% Similarity=0.054 Sum_probs=178.3
Q ss_pred CccccCC-CCCCceEeccCCCC------CcchHHHH--HHHHHhhCCCC-CCCCCCcchhhHHHHHHHHHHHHHHHHHhC
Q 043646 66 DVEFDYS-FGKRRLTYADHTAS------GRSLRYIE--DYIINNVLPFY-GNTHTSDSYVGQRMTKMVHEASNYIKRCLG 135 (625)
Q Consensus 66 ~~~~~~p-~g~~~~~Yld~~~~------~~~p~~v~--ea~~~~l~~~~-~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g 135 (625)
+..+.+. .|+ -|+|..+. |...+.|. +++.+++.... ..+..... ......++.++++++.+
T Consensus 28 G~~l~D~~dG~---~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~ 99 (431)
T TIGR03251 28 GSVLVDARDGR---RYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDV-----YTVAMARFVDTFARVLG 99 (431)
T ss_pred CCEEEECCCCC---ChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCC-----CCHHHHHHHHHHHHhcC
Confidence 3445553 453 38886433 55678888 88888775321 11111000 12333445566666653
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCC--CCceEEEEcCCCCchhHHHHHHcCCe-EE------
Q 043646 136 GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRD--EERWVVFLGPYEHHSNLLSWRQSLAE-VV------ 206 (625)
Q Consensus 136 ~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~--gd~~~Vlv~~~~h~s~~~~~~~~G~~-vv------ 206 (625)
.+.-+.+.|+.||+.+.-.++-.++.... |..-.++ ++ +.+.+|-....+|.....++...|.. ..
T Consensus 100 ~~~~~~v~f~~sGsEAve~AlklAr~~t~----~~~~~~g-~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 174 (431)
T TIGR03251 100 DPALPHLFFIEGGALAVENALKTAFDWKS----RHNQARG-IPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPK 174 (431)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHhh----cchhhcC-CCCCCCceEEEECCccCCcchhhhhccCCccccccCCCC
Confidence 22223789998899874333322221000 0000000 11 11224444455565554444333311 00
Q ss_pred ----EEec-------CCCC--------CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcC
Q 043646 207 ----EIGL-------DDNG--------LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYG 263 (625)
Q Consensus 207 ----~v~~-------~~~~--------~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g 263 (625)
.++. +... .-+++++++.+.. ..+++.+|+++.+....|.+.+ +++|.++|++||
T Consensus 175 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g 252 (431)
T TIGR03251 175 FDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE--RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHD 252 (431)
T ss_pred CCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHh--CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcC
Confidence 0110 0000 0123445555542 2357899999999988898753 889999999999
Q ss_pred CEEEEeccCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccc
Q 043646 264 GFACFDFAAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEK 340 (625)
Q Consensus 264 ~~vivD~A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~ 340 (625)
+++|+|++++ +|.... .....+. .+|+++++ |.+ |. .|++ +.+++... .... +.+...
T Consensus 253 ~llI~DEV~tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~~-~g~~-~~~~i~~~--~~~~-~~~~~~--------- 313 (431)
T TIGR03251 253 ALLIFDEVQTGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--QV-CGIM-AGRRVDEV--ADNV-FAVPSR--------- 313 (431)
T ss_pred CEEEEecchhccCccchHHHHHhcCC-CCCEEEec--ccC--cc-ceEE-ecchHHHh--hhhc-ccCccc---------
Confidence 9999999977 443311 1111111 67999876 665 43 2444 44432110 0000 000000
Q ss_pred ccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEe
Q 043646 341 DTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIG-YEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLV 419 (625)
Q Consensus 341 ~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g-~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~ 419 (625)
...-..|+|..+.+..++++.+ +..+ .+++.+....+.+.+.+...+.+++ .... ..++.++.+.+
T Consensus 314 --------~~~T~~gnpl~~aaa~a~L~~l--~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~--i~~v-rg~G~~~~i~~ 380 (431)
T TIGR03251 314 --------LNSTWGGNLVDMVRATRILEII--EEERLVDNARVQGAHLLARLHELAAEFPHL--VSNP-RGRGLMCAFDL 380 (431)
T ss_pred --------cCCCCCCCHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHhCccc--eecc-cccceeEEEEe
Confidence 0000124444444445566655 2223 2334444444444443322333322 2221 12344445444
Q ss_pred ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEe
Q 043646 420 YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRIT 499 (625)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis 499 (625)
.... ....+.+.|.+ +||.+.+. ....+|++
T Consensus 381 ~~~~---------------~~~~~~~~l~~-~Gvl~~~~---------------------------------g~~~lr~~ 411 (431)
T TIGR03251 381 PSTA---------------DRDEVIRQLYR-EGVLLLGC---------------------------------GERSIRFR 411 (431)
T ss_pred CCHH---------------HHHHHHHHHHh-CCeEEecC---------------------------------CCCeEEEE
Confidence 2210 12357777764 79998632 12569999
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 043646 500 FPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 500 ~~~~~t~edid~ll~aL~~~ 519 (625)
+++.+|++|+++++++|.++
T Consensus 412 P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 412 PPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred CCccCCHHHHHHHHHHHHhC
Confidence 99999999999999999753
No 368
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.38 E-value=3.9e-10 Score=112.90 Aligned_cols=353 Identities=17% Similarity=0.222 Sum_probs=205.4
Q ss_pred chHHHHHHHHHhhCCCC--CCCCCCcchhhHHHHH-HHHHHHHHHHHHhCCCCCC---cEEEeCChHHHHHHHHHHHhcc
Q 043646 89 SLRYIEDYIINNVLPFY--GNTHTSDSYVGQRMTK-MVHEASNYIKRCLGGGQAD---AIIFCGAGTTAAIKRLQEVMGI 162 (625)
Q Consensus 89 ~p~~v~ea~~~~l~~~~--~n~~~~~~~~~~~~~~-~~~~~~~~ia~~~g~~~~~---~vift~sGttaal~~l~~~l~~ 162 (625)
....|+|++-..+.+.| +.|+.- |.-|..+.+ +..-++++..+.|+.+++. +|--- ||+.|++..-...
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~R-YYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~-SGSPANfavYtal--- 126 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGAR-YYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPY-SGSPANFAVYTAL--- 126 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCccc-ccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccC-CCCchhhHHHhhh---
Confidence 45688999888886654 445543 334444444 3345667778899998774 23333 7888877665443
Q ss_pred cccchhhhhhhhccCCCCceEEEEcCCCCchhH-HHH----HHcCC-----eEEEEecCC-CCCCCHHHHHHHHHHhhhC
Q 043646 163 TVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL-LSW----RQSLA-----EVVEIGLDD-NGLLDIEALRSQLELYKAA 231 (625)
Q Consensus 163 ~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~----~~~G~-----~vv~v~~~~-~~~ld~~~L~~~l~~~~~~ 231 (625)
++|+++ |.-.+.-|...+ ... +..-+ +-..+.+++ +|.+|.+.|++....
T Consensus 127 -------------l~Ph~R--iMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~---- 187 (477)
T KOG2467|consen 127 -------------LKPHER--IMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL---- 187 (477)
T ss_pred -------------cCCCCe--eeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh----
Confidence 478886 655433222221 111 11111 112234564 789999999987764
Q ss_pred CCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEE
Q 043646 232 KRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLI 311 (625)
Q Consensus 232 ~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v 311 (625)
=||++++.-. +..-...|..++.++|.+.|+++++|-||-.|.+.-.+-+-..+.+|+|+.+.||.+.||.| |+++.
T Consensus 188 frPk~iiaG~--SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsLRGPRg-~mIFy 264 (477)
T KOG2467|consen 188 FRPKLIIAGT--SAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSLRGPRG-AMIFY 264 (477)
T ss_pred cCCcEEEecc--ccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccccCCcc-eeEEE
Confidence 3788765432 23344578999999999999999999998655544333322235789999999999999997 88888
Q ss_pred eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHH
Q 043646 312 SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYI--GYEVIKKQEDVYIE 389 (625)
Q Consensus 312 ~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~--g~~~i~~~~~~l~~ 389 (625)
++..- ...|.. |-. +.|. .++.....-++ .. .|.|--..+.+.| ..+++.. ......+++..+++
T Consensus 265 RkGvk---~~~~k~-g~~-i~yd----lE~kINfaVFP-~l-QGGPHNhtIaalA--vALkQa~tpefk~Yq~qV~~Nak 331 (477)
T KOG2467|consen 265 RKGVK---SIKPKQ-GKE-ILYD----LEDKINFAVFP-GL-QGGPHNHTIAALA--VALKQAMTPEFKEYQKQVLKNAK 331 (477)
T ss_pred eccCC---cCCCCC-CCc-ceec----hhhhhhhhccc-cc-cCCCCcchHHHHH--HHHHhhCCHHHHHHHHHHHHHHH
Confidence 88762 222221 111 1110 00000000000 01 2333222332222 2223333 34466677777788
Q ss_pred HHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhh
Q 043646 390 SALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTL 469 (625)
Q Consensus 390 ~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~ 469 (625)
.+.+.|.+. |.+++..-.. ...+.+.+ +..++++..+-+.| +..+|.+.-...++..
T Consensus 332 ala~~l~~~-Gy~lvtgGTD--nHlvLvDL--------------r~~G~dGarvE~vl-e~~~I~~NKNtvpGD~----- 388 (477)
T KOG2467|consen 332 ALASALISR-GYKLVTGGTD--NHLVLVDL--------------RPKGVDGARVEKVL-ELCHIALNKNTVPGDK----- 388 (477)
T ss_pred HHHHHHHHc-CceEecCCcc--ceEEEEec--------------cccCCchHHHHHHH-HHhhhhhcCCcCCCCc-----
Confidence 888888776 8887754211 12222222 33567776665555 6667766433322210
Q ss_pred hcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCC----HHHHHHHHHHHHHHHHhh
Q 043646 470 LAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMS----NEEFEFILAALEFIAAYG 523 (625)
Q Consensus 470 l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t----~edid~ll~aL~~~~~~~ 523 (625)
.-+.|+.|||..+.++| ++|++++.+.|.+.+.-.
T Consensus 389 -------------------Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i~ 427 (477)
T KOG2467|consen 389 -------------------SALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKIA 427 (477)
T ss_pred -------------------cccCCCceeccchhhcccCccHHHHHHHHHHHHHHHHHH
Confidence 11247899999876665 789999998888766443
No 369
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.38 E-value=2.2e-10 Score=116.62 Aligned_cols=316 Identities=17% Similarity=0.135 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHH-HHh--cccccchhhhhhhhccCCCCceEEEEcCCCCchhHH
Q 043646 120 TKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQ-EVM--GITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL 196 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~-~~l--~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~ 196 (625)
.+-+.++|+.+++++|++++ +|+..||++-..++-++ .++ |..... ..|...++..++++.+.|--...
T Consensus 68 l~Gipe~r~l~a~llgv~~~-~viv~gNSSL~lM~d~i~~a~~~G~~~~~-------~PW~~~~~vKfLCPvPGYDRHFa 139 (425)
T PF12897_consen 68 LDGIPEARELFAELLGVPPE-NVIVGGNSSLNLMHDTISRAMLHGVPGSE-------TPWCKEEKVKFLCPVPGYDRHFA 139 (425)
T ss_dssp SS--HHHHHHHHHHHTS-GG-GEEE-SS-HHHHHHHHHHHHHHH--TT-S-------S-GGGSS--EEEEEES--HHHHH
T ss_pred cCChHHHHHHHHHHhCCCHH-HEEEeccchHHHHHHHHHHHHhcCCCCCC-------CCchhccCceEEecCCCchHHHH
Confidence 34567899999999999988 88887665555443332 222 211000 01333455679999888877776
Q ss_pred HHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCe-EEEEecccCccccccCHHHHHHHHH----HcCCEEEEecc
Q 043646 197 SWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPM-LGSFSACSNVTGIYSDTRSIARLLH----QYGGFACFDFA 271 (625)
Q Consensus 197 ~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~-lv~~~~~~n~TG~~~~l~~I~~la~----~~g~~vivD~A 271 (625)
..+..|++.+.||.+++| .|++.+++++.++ +..| +-+++--+||||+.+.-+.+.+++. ..+.-+++|.|
T Consensus 140 i~E~~Giemi~VpM~~dG-PDmD~Ve~LV~~D---~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 140 ITEHFGIEMIPVPMTEDG-PDMDMVEELVAED---PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp HHHHCT-EEEEEEEETTE-E-HHHHHHHTHTS---TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred HHHhhCcEEEecCCCCCC-CCHHHHHHHHhcC---CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 778899999999998877 6999999998753 4566 6677888999999988777777664 46899999999
Q ss_pred CcCCCccccC--CC---C-----CCCCCc--EEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccc
Q 043646 272 ASGPYVKINL--RS---R-----NIDGYD--AIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDE 339 (625)
Q Consensus 272 ~~~g~~~id~--~~---~-----~~~~~D--~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~ 339 (625)
+++-+..-+. .. + .....| +++.|.+|.-....|++++..+++-. ..+...
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl--~~~~~~--------------- 278 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANL--AWIKKH--------------- 278 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHH--HHHHHH---------------
T ss_pred ceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHH--HHHHHH---------------
Confidence 8875541111 10 0 112334 56779999876445678877776652 111000
Q ss_pred cccccccchhhhhcCCChhHHHHHHHHHHHHHHhhc-CHHHH-HHHHHH-------HHHHHHHhhC-CCCcEEEeCCCCC
Q 043646 340 KDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYI-GYEVI-KKQEDV-------YIESALGRIL-PNQNIQVLGNTSV 409 (625)
Q Consensus 340 ~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~-g~~~i-~~~~~~-------l~~~l~~~L~-~l~gv~v~~~~~~ 409 (625)
......| |+-+.-++. ..|+ ++.. |.+.. ++|..- ..+.+.++|. .....+...|.
T Consensus 279 ---------~~~~tIg-pdKvNQLRH-vrff-~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~-- 344 (425)
T PF12897_consen 279 ---------LSVQTIG-PDKVNQLRH-VRFF-KDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK-- 344 (425)
T ss_dssp ---------HHHH-S----HHHHHHH-HHHH-HSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S--
T ss_pred ---------hcCceeC-ccHHHHHHH-HHHh-cChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC--
Confidence 0001112 221222222 2232 2333 33322 222221 2344555666 44334555553
Q ss_pred CCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeec-CCCCCchhhHhhhcCChhhHHHHHHHHHhCC
Q 043646 410 KRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARG-GCACAGPYGHTLLAFDQTRSLEIRSAIQKGY 488 (625)
Q Consensus 410 ~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 488 (625)
-+-.++|.+.++. ...++++. ++.||.+.+ |..+ ||++..
T Consensus 345 -GGYFIsld~~~G~----------------AkrvV~la-keAGV~LT~AGAtf--Pyg~DP------------------- 385 (425)
T PF12897_consen 345 -GGYFISLDVLDGT----------------AKRVVELA-KEAGVALTPAGATF--PYGKDP------------------- 385 (425)
T ss_dssp -BSS-EEEEESTT-----------------HHHHHHHH-HHTTEE---TTTTS--GGG--T-------------------
T ss_pred -CceEEEEecCCCh----------------HHHHHHHH-HHhCceeCCCCCCC--CCCCCC-------------------
Confidence 4567888887753 66788877 558999865 4433 676643
Q ss_pred CCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 043646 489 LGVKPGWTRITFPYYMSNEEFEFILAALEFIAA 521 (625)
Q Consensus 489 ~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~ 521 (625)
.+..|||++. |-+.+|++..++.+.-++.
T Consensus 386 ---~D~nIRiAPS-~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 386 ---RDSNIRIAPS-YPSLEELETAMDVFATCVK 414 (425)
T ss_dssp ---TS-EEEE--S-SS-HHHHHHHHHHHHHHHH
T ss_pred ---CCCcEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 2478999986 5688999999988877653
No 370
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.37 E-value=2.6e-09 Score=116.84 Aligned_cols=361 Identities=15% Similarity=0.103 Sum_probs=190.8
Q ss_pred CccccCCCCCCceEeccCCCC------CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCC-
Q 043646 66 DVEFDYSFGKRRLTYADHTAS------GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQ- 138 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~~~------~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~- 138 (625)
+..+++..|+ -|+|..+. |...+.|.+++.+++..... .++. ....+...++.+.+.+.+....
T Consensus 49 G~~l~D~dG~---~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~-~~~~-----~~~~~~~~~lAe~L~~~~p~~~~ 119 (459)
T PRK06931 49 GVWVTDVEGN---QYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLP-LHTL-----DLTTPLKDAFSEYLLSLLPGQGK 119 (459)
T ss_pred ccEEEeCCCC---EEEEcccchhhccCCCCCHHHHHHHHHHHhhhcc-cccc-----ccCCHHHHHHHHHHHHhCCCccc
Confidence 3455555553 48886433 56788999999988753110 0110 0123445567777878775322
Q ss_pred CCcE-EEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEE-cCCCCchhHHHHHHcC------------Ce
Q 043646 139 ADAI-IFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFL-GPYEHHSNLLSWRQSL------------AE 204 (625)
Q Consensus 139 ~~~v-ift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv-~~~~h~s~~~~~~~~G------------~~ 204 (625)
+..+ +|+.+|+.+.-..+-.++. . .|.. .|+. ...+|.....++...| ..
T Consensus 120 ~~~~~f~~~SGsEAve~AlklAr~--------------~-tgr~-~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~ 183 (459)
T PRK06931 120 EYCLQFTGPSGADAVEAAIKLAKT--------------Y-TGRS-NVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPG 183 (459)
T ss_pred cceEEEeCCCcHHHHHHHHHHHHH--------------h-cCCC-eEEEECCCcCCccHHHHhhcCCcccccCCCCCCCC
Confidence 1134 4445788874443332321 1 1222 3554 4445554443332221 12
Q ss_pred EEEEecCCCC--------CCCHHHHHHHHHHhh-----hCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEE
Q 043646 205 VVEIGLDDNG--------LLDIEALRSQLELYK-----AAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFAC 267 (625)
Q Consensus 205 vv~v~~~~~~--------~ld~~~L~~~l~~~~-----~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vi 267 (625)
+..+|..... .-+.+.+++.+.+.. ..+++.+|++..+....|.+.| +++|.++|++||+++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI 263 (459)
T PRK06931 184 VQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLI 263 (459)
T ss_pred cEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 3344432211 012343433222211 1235789999888888888765 7899999999999999
Q ss_pred EeccCc-CCCcc--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeecccccccccc
Q 043646 268 FDFAAS-GPYVK--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY 344 (625)
Q Consensus 268 vD~A~~-~g~~~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~ 344 (625)
+|+++. +|-.. .-....+. .+|+++++ |.+++...+|+++.++.. +.+.+.. .++|
T Consensus 264 ~DEV~tGfGRtG~~~a~~~~gv-~PDivt~g--K~l~gG~Pi~av~~~~~~---~~~~~~~-~~~T-------------- 322 (459)
T PRK06931 264 VDEVQAGFARTGKMFAFEHAGI-EPDIIVMS--KAVGGGLPLAVLGIKKEF---DAWQPGG-HTGT-------------- 322 (459)
T ss_pred EecchhcCCcCchHHHhhhcCC-CCCEEEec--ccccCCcceeeeeeHHHH---hhccCCC-CCCC--------------
Confidence 999965 32111 11111111 57999887 998765557777776553 2222211 1111
Q ss_pred ccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcEEEeCCCCCCCcceEEEEec
Q 043646 345 LEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNIQVLGNTSVKRQAILSFLVY 420 (625)
Q Consensus 345 ~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv~v~~~~~~~~~~i~~f~~~ 420 (625)
..|.|-.+++..+.++.+ +. +.+.++.+.+.+++.+.|++ .|.+.-+ ...+..+.+.+.
T Consensus 323 --------~~gnpla~aaala~L~~l--~~---~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v----rG~Glm~giel~ 385 (459)
T PRK06931 323 --------FRGNQLAMATGLTTLKIL--KE---ENLAQNAAERGEWLKAQLAELQKRYPCIGNV----RGRGLMIGIEIV 385 (459)
T ss_pred --------CCCCHHHHHHHHHHHHHH--Hh---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEeE----ecCceEEEEEEc
Confidence 123444444444555554 22 23455666666666666654 3322111 123445555443
Q ss_pred cCCCCCCccccccCCCCCC---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEE
Q 043646 421 STTNSSPENMKIERNKPLH---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTR 497 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iR 497 (625)
.+.... ........+ ...+...+.+ .||.+.+... .++.+|
T Consensus 386 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~-------------------------------~~~~l~ 429 (459)
T PRK06931 386 DERQPA----DAMGSYPADGELAAAIQKACFE-NGLLLERGGR-------------------------------NGNVVR 429 (459)
T ss_pred cCcccc----cccccCCccHHHHHHHHHHHHH-CCcEEeecCC-------------------------------CCCEEE
Confidence 221000 000000001 2345555544 7998864210 136799
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 498 ITFPYYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 498 is~~~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
+.+++.+|++|+|++++++++++....+
T Consensus 430 ~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 430 LLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred EECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999876543
No 371
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.36 E-value=1.3e-09 Score=118.53 Aligned_cols=214 Identities=11% Similarity=0.025 Sum_probs=124.2
Q ss_pred CHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCccc--cCCCCCC-CC
Q 043646 217 DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYVKI--NLRSRNI-DG 288 (625)
Q Consensus 217 d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~~i--d~~~~~~-~~ 288 (625)
+++.|++++.+ ..+++.+|++..+....|.+.| +++|.++|++||+++|+|+++. +|-..- -....+. ..
T Consensus 237 ~l~~l~~~l~~--~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~ 314 (464)
T TIGR00699 237 CLEEVEDLIKK--WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDP 314 (464)
T ss_pred HHHHHHHHHHh--cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCC
Confidence 35667777763 2246889999999999999988 9999999999999999999975 222110 1111111 14
Q ss_pred CcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHH
Q 043646 289 YDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALA 368 (625)
Q Consensus 289 ~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~ 368 (625)
+|+++++ |.+|+ .|+++.+ +. +....+.. .++| ..|.|..++...+.++
T Consensus 315 PDi~t~g--K~lg~---gG~~~~~-~~--~~~~~~~~-~~~T----------------------~~gnp~~~aaa~a~L~ 363 (464)
T TIGR00699 315 PDMVTFS--KKFQT---AGYFFHD-PA--FRPNKPYR-QFNT----------------------WMGDPSRALILREIIQ 363 (464)
T ss_pred CCEEEeh--hhhcc---CCccccc-hh--ccCCCCcc-cccC----------------------CCCCHHHHHHHHHHHH
Confidence 8998876 98852 1333322 22 11111111 1111 0233333444445565
Q ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CC-cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHH
Q 043646 369 FWVKEYIGYEVIKKQEDVYIESALGRILP----NQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFV 443 (625)
Q Consensus 369 ~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v 443 (625)
.+. . +.+.++...+.+++.+.|.+ .| .+.-+.. ..++.++.+.+.... ....+
T Consensus 364 ~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg--~G~Glm~gie~~~~~---------------~~~~i 421 (464)
T TIGR00699 364 EIK--R---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG--KGRGTFIAWDTPDEA---------------KRDKL 421 (464)
T ss_pred HHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc--cCeEEEEEEecCCHH---------------HHHHH
Confidence 552 2 24455555555566665544 34 2221110 024455555442100 13456
Q ss_pred HHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 444 ATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 444 ~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.+.+.+ .||.++.. ....+||.+++.+|++|++.++++|+++
T Consensus 422 ~~~~~~-~Gvl~~~~---------------------------------g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 422 LKKARN-NGVNIGGC---------------------------------GVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHHHH-CCcEEecC---------------------------------CCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 777755 69988631 1267999999999999999999999875
No 372
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.31 E-value=1.4e-09 Score=118.56 Aligned_cols=356 Identities=13% Similarity=0.049 Sum_probs=185.4
Q ss_pred CccccCC-CCCCceEeccCCC------CCcchHHHHH--HHHHhhCCCCC-CCCCCcchhhHHHHHHHHHHHHHHHHHhC
Q 043646 66 DVEFDYS-FGKRRLTYADHTA------SGRSLRYIED--YIINNVLPFYG-NTHTSDSYVGQRMTKMVHEASNYIKRCLG 135 (625)
Q Consensus 66 ~~~~~~p-~g~~~~~Yld~~~------~~~~p~~v~e--a~~~~l~~~~~-n~~~~~~~~~~~~~~~~~~~~~~ia~~~g 135 (625)
+..+.+. .|+ -|+|..+ .|...+.|.+ ++.+++..... .+... . ...+...++.+.|+++.+
T Consensus 35 G~~l~D~~dG~---~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~-~----~~~~~~~~la~~l~~~~~ 106 (443)
T PRK08297 35 GSYLVDARTGR---RYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNS-D----VYTVEMARFVDTFARVLG 106 (443)
T ss_pred CCEEEECCCCC---EeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccC-C----cCCHHHHHHHHHHHhhcC
Confidence 4555552 553 4888643 3567789999 99888854211 11110 0 112334456667777763
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccC-CCCceEEEEcCCCCchhHHHHHHcCCeE---------
Q 043646 136 GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLR-DEERWVVFLGPYEHHSNLLSWRQSLAEV--------- 205 (625)
Q Consensus 136 ~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~~~h~s~~~~~~~~G~~v--------- 205 (625)
-+.-+.|.|+.||+.+.-.++-.++..... + +...+-. ++...+|.+...+|.....++...|...
T Consensus 107 p~~~~~v~f~~SGsEAve~AlKlAr~~~~~---~-~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~ 182 (443)
T PRK08297 107 DPELPHLFFVDGGALAVENALKVAFDWKSR---K-NEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKF 182 (443)
T ss_pred CCCCCEEEEeCchHHHHHHHHHHHHHHhhc---c-ccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCC
Confidence 222238999988988744333222210000 0 0000000 1222244445556655544443333110
Q ss_pred --EEEecCC-----CC-C---------CCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCC
Q 043646 206 --VEIGLDD-----NG-L---------LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGG 264 (625)
Q Consensus 206 --v~v~~~~-----~~-~---------ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~ 264 (625)
..++... .+ . -+++++++.+.+ ..+++.+|++..+....|.+.| +++|.++|++||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~ 260 (443)
T PRK08297 183 DWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER--HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDA 260 (443)
T ss_pred CccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0011000 00 0 123455666652 2357889999988888888744 7899999999999
Q ss_pred EEEEeccCc-CCCccc--cCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccc
Q 043646 265 FACFDFAAS-GPYVKI--NLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKD 341 (625)
Q Consensus 265 ~vivD~A~~-~g~~~i--d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~ 341 (625)
++|+|+++. +|-... .....+. .+|+++++ |.+ | +|.+++.+++... ......+.+.
T Consensus 261 llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l--~--~~a~l~~~~i~~~--~~~~~~~~~~----------- 320 (443)
T PRK08297 261 LLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAFG--KKT--Q--VCGIMAGRRVDEV--EDNVFAVSSR----------- 320 (443)
T ss_pred EEEEechhhccCccchHHHHHhcCC-CCCEEEec--ccc--c--ccceecchHHHHh--hhhhccCccc-----------
Confidence 999999975 433211 0011111 57999875 887 3 2344455443111 0000000000
Q ss_pred cccccchhhhhc-CCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC----CCcE--EEeCCCCCCCcce
Q 043646 342 TLYLEDIEEREN-GGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILP----NQNI--QVLGNTSVKRQAI 414 (625)
Q Consensus 342 ~~~~~~~~~~~~-~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~----l~gv--~v~~~~~~~~~~i 414 (625)
.... .|.|..+....++++.+ + .+.+.++.+.+.+++.+.|++ .|.+ .+-+ ++.+
T Consensus 321 --------~~~T~~gnpl~~aaa~a~L~~l--~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-----~G~~ 382 (443)
T PRK08297 321 --------INSTWGGNLVDMVRARRILEVI--E---EDGLVENAARQGEYLLARLEELAAEFPAVVSNVRG-----RGLM 382 (443)
T ss_pred --------cCCCCCccHHHHHHHHHHHHHH--H---hcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec-----cceE
Confidence 0000 12333333334444444 2 224555666666666666654 3322 2222 3344
Q ss_pred EEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCc
Q 043646 415 LSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPG 494 (625)
Q Consensus 415 ~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g 494 (625)
+.+.+.... ....+.+.|.+ +||.+.++. ..
T Consensus 383 ~~i~~~~~~---------------~~~~~~~~l~~-~Gvl~~~~~---------------------------------~~ 413 (443)
T PRK08297 383 CAFDLPTTA---------------DRDEVIRRLWE-EGVLVLPCG---------------------------------ER 413 (443)
T ss_pred EEEEecCHH---------------HHHHHHHHHHH-CCEEEecCC---------------------------------CC
Confidence 444442110 13467777764 799986321 25
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 495 WTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 495 ~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+|+++++.+|++|+|+++++|++++.+
T Consensus 414 ~lr~~P~l~~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 414 SIRFRPALTVTTEEIDAAIDALRRALPE 441 (443)
T ss_pred eEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 6999999999999999999999998764
No 373
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.31 E-value=4e-10 Score=116.39 Aligned_cols=196 Identities=17% Similarity=0.129 Sum_probs=130.6
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
+...+++++++...+..+ -+-. +. .......++....-..+.+....+.+..+ +++++++..+..++.
T Consensus 37 s~~~~e~iea~~~~~~~~-v~Le---~~--l~~g~~~~R~~~~~~~~~~~~~aea~~iv-nnn~aAVll~~~al~----- 104 (395)
T COG1921 37 SLYSPEAIEAMKEAMRAP-VELE---TD--LKTGKRGARLTELAELLCGLTGAEAAAIV-NNNAAAVLLTLNALA----- 104 (395)
T ss_pred ccCCHHHHHHHHHHhccc-ceee---ee--cccchhhHHHHHHHHHHhcccchhheeeE-CCcHHHHHHHHhhhc-----
Confidence 456678888887766432 1111 11 11112222233333334444323355666 566666766666552
Q ss_pred hhhhhhhhccCCCCceEEEEcC-----CCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEec
Q 043646 167 IMRDKLITSLRDEERWVVFLGP-----YEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSA 241 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~-----~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~ 241 (625)
++.+ |+++. ..|+.+...++..|++++++... +.....+++.+|. ++++++.-.+
T Consensus 105 -----------~~~E--vVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-----e~ta~llkV~ 164 (395)
T COG1921 105 -----------EGKE--VVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-----ENTALLLKVH 164 (395)
T ss_pred -----------cCCe--EEEEccccccCCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-----cCCeeEEEEe
Confidence 2333 44431 47888888899999999888743 4567899999999 5788777777
Q ss_pred ccCccccc--cCHHHHHHHHHHcCCEEEEeccCcCCCc-cccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEecccc
Q 043646 242 CSNVTGIY--SDTRSIARLLHQYGGFACFDFAASGPYV-KINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALY 316 (625)
Q Consensus 242 ~~n~TG~~--~~l~~I~~la~~~g~~vivD~A~~~g~~-~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~ 316 (625)
.+|. |.. .+.++++++||++|+++++|.+++.... ..+++.+-..|+|.+++|++|.||||. .|+++.+++++
T Consensus 165 s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI 240 (395)
T COG1921 165 SSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELI 240 (395)
T ss_pred eccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHH
Confidence 7765 554 5788899999999999999999765322 234443333489999999999999999 59999999984
No 374
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.30 E-value=2.8e-09 Score=121.90 Aligned_cols=367 Identities=14% Similarity=0.074 Sum_probs=213.6
Q ss_pred CCCCCCChHHHHHHHHHhhcCCCccccCCCCCCceEeccCCCCCcc-hHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHH
Q 043646 44 HPPHSKPSEEKLAWLRSQIIGNDVEFDYSFGKRRLTYADHTASGRS-LRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKM 122 (625)
Q Consensus 44 ~~~~~~~~~~~~~~lr~~~~~~~~~~~~p~g~~~~~Yld~~~~~~~-p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~ 122 (625)
.+|...+..+.++++++.---.. ....|+..+...-. |..|.+.+.+.- .+|..=..-.-..+++..+.
T Consensus 56 ~lp~~~sE~e~~~~~~~~a~kN~---------~~~~fiG~G~y~~~~P~vi~~~i~~~~-~~yTaYTPYQpEisQG~Lqa 125 (954)
T PRK12566 56 DLPAALDEQAALARLRGYAEQNQ---------VWTSLIGMGYHGTVTPTVILRNVLENP-GWYTAYTPYQPEIAQGRLEA 125 (954)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCC---------CccccccccccCCcCcHHHHHHHHhCc-hhhhcCCCCCchhhhHHHHH
Confidence 45666666777777776542210 01234443333332 333335554311 11111011011245667777
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH--
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ-- 200 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-- 200 (625)
.-+....|+++.|.+-.+.-++- ++||+-..+..+.. .....+..|+++..-|+.....++.
T Consensus 126 l~e~Qtmi~~LtGm~vaNASl~D--~atA~aEA~~ma~~--------------~~~~k~~~~~v~~~~hP~~~~v~~t~~ 189 (954)
T PRK12566 126 LLNFQQMTIDLTGLDLANASLLD--EATAAAEAMALAKR--------------VAKSKSNRFFVDEHCHPQTLSVLRTRA 189 (954)
T ss_pred HHHHHHHHHHHhCchhhhhhhcc--chhHHHHHHHHHHH--------------HhhcCCCEEEECCCCCHHHHHHHHHhh
Confidence 88899999999999854333443 44442222222221 1111123599999999998766654
Q ss_pred --cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccC--cCCC
Q 043646 201 --SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA--SGPY 276 (625)
Q Consensus 201 --~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~--~~g~ 276 (625)
.|++++. +++++.+. +.+..|++..| |..|.+.|+++|++++|+.|++++ +++- +.+.
T Consensus 190 ~~~g~~i~~-----------~~~~~~~~-----~~~~~v~vq~P-~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~l 251 (954)
T PRK12566 190 EGFGFELVV-----------DAVDNLAA-----HAVFGALLQYP-DTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLV 251 (954)
T ss_pred hcCCcEEEE-----------cchhhcCC-----CCEEEEEEECC-CCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhC
Confidence 4667664 22334343 35777777776 578999999999999999999855 4442 1221
Q ss_pred ccccCCCCCCCCCcEEEEcCC-----CCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhh
Q 043646 277 VKINLRSRNIDGYDAIFLATH-----KFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEER 351 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~h-----K~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~ 351 (625)
... ..++ |+|+++.+.+ =.||||. .|++.+++++ .+.++-...| -+++...........+-+..+-|
T Consensus 252 l~~-Pge~---GADI~vG~~Q~fGvp~~~GGP~-ag~~a~~~~~--~R~~PGRivG-~s~D~~G~~a~~l~LqtREQHIR 323 (954)
T PRK12566 252 LTP-PGEL---GADVVLGSTQRFGVPMGYGGPH-AAYFACRDDY--KRAMPGRIIG-VSRDARGNTALRMALQTREQHIR 323 (954)
T ss_pred CCC-hhhc---CCcEEeeCCCcCCCCCCCCCCC-eeeeeehHHH--HhhCCCCccc-eeecCCCCeeeehhhhHHHHHhh
Confidence 111 1223 8999987554 3446666 6999999987 4455443333 33332211111223334445566
Q ss_pred hcCCChhHHHH--H---HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCCCCC
Q 043646 352 ENGGTPQIVQM--I---RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTTNSS 426 (625)
Q Consensus 352 ~~~gt~~~~~~--~---~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~ 426 (625)
.+..|.|++.. + .+++-.......|..+|.++++.++.++.+.|.+ .|+++.... -.=.|.+.-+.
T Consensus 324 ReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~-----fF~~~~v~~~~--- 394 (954)
T PRK12566 324 REKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRH-----FFDTLTLEVGG--- 394 (954)
T ss_pred hccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCC-----ccceEEEEccC---
Confidence 77788887653 1 2222222335567888999999999999999988 588875431 11122221110
Q ss_pred CccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCH
Q 043646 427 PENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSN 506 (625)
Q Consensus 427 ~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~ 506 (625)
...++.+...+ .||.+|-- ..+.+.||+.-.+|.
T Consensus 395 ------------~~~~~~~~a~~-~~~n~r~~---------------------------------~~~~~~~s~de~~~~ 428 (954)
T PRK12566 395 ------------AQAAIIESAEA-ARINLRIL---------------------------------GRGRLGVSLDETCDE 428 (954)
T ss_pred ------------CHHHHHHHHHH-CCCeeEEe---------------------------------CCCeEEEEeCCCCCH
Confidence 14456666644 68888721 136799999999999
Q ss_pred HHHHHHHHHHH
Q 043646 507 EEFEFILAALE 517 (625)
Q Consensus 507 edid~ll~aL~ 517 (625)
+|++.+++++.
T Consensus 429 ~~~~~~~~~f~ 439 (954)
T PRK12566 429 ATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHHhc
Confidence 99999999884
No 375
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.29 E-value=3e-10 Score=115.00 Aligned_cols=342 Identities=14% Similarity=0.148 Sum_probs=194.9
Q ss_pred CceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChH
Q 043646 76 RRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGT 149 (625)
Q Consensus 76 ~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGt 149 (625)
...-|||..+ .|-+.+.|.+++.+++...|..... ...+...++.+.+...+-.+-. .+.|+++|+
T Consensus 48 ~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~-------~~~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGs 119 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSG-------YLNPPIHDLAEALVSKLPGDLK-VVFFVNSGS 119 (442)
T ss_pred CCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeecc-------ccCCcHHHHHHHHHHhCCCCce-EEEEecCCc
Confidence 4455888654 3456889999999988665432211 1233455566777777765555 789998899
Q ss_pred HHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec-------------CC-CC-
Q 043646 150 TAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL-------------DD-NG- 214 (625)
Q Consensus 150 taal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~-------------~~-~~- 214 (625)
.|+=..+..++. + .+.-| .|-....+|......+-..|.....-+. ++ .+
T Consensus 120 EANelal~mar~--Y-----------t~~~d--iIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~ 184 (442)
T KOG1404|consen 120 EANELALKMARL--Y-----------TGNLD--IIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGI 184 (442)
T ss_pred hHHHHHHHHHHH--h-----------cCCce--EEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCccccc
Confidence 986555544441 0 12223 3444445554444333332222111110 11 11
Q ss_pred ---C---CCH----HHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCccc
Q 043646 215 ---L---LDI----EALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVKI 279 (625)
Q Consensus 215 ---~---ld~----~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~~i 279 (625)
. --- ++|+..+... .......++...+...-|++.+ +++..++|+++|.++|.|++++. |-..
T Consensus 185 ~~~~~~~e~~d~~a~~l~d~i~~~-~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG- 262 (442)
T KOG1404|consen 185 FGGSNEEEASDRYAKELEDLILYD-GPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG- 262 (442)
T ss_pred CCCCchhhhHHHHHHHHHHHHHhc-CCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-
Confidence 0 012 3334444321 1124568888888888899865 79999999999999999999764 2222
Q ss_pred cCCCCCCC--CCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCCh
Q 043646 280 NLRSRNID--GYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTP 357 (625)
Q Consensus 280 d~~~~~~~--~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~ 357 (625)
.|..++.. -+|+++.+ |.+|....+|++++.+++.. .+..... ..+..|..
T Consensus 263 ~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~EIa~--v~~~~~~-----------------------~fnTyggn 315 (442)
T KOG1404|consen 263 HMWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTPEIAD--VLNQKSS-----------------------HFNTYGGN 315 (442)
T ss_pred ccccccccCCCccHHHHH--hhccCCCcceeeecCHHHHH--HHHhccc-----------------------cccccCCC
Confidence 33322211 35776665 99987777899999998833 2111000 01122333
Q ss_pred hHHH-HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCC
Q 043646 358 QIVQ-MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERN 435 (625)
Q Consensus 358 ~~~~-~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~ 435 (625)
++.. +..+.+..+ -.+++.++......|+.+.|.++. ...++++. ..++-++-..+..+.. +.
T Consensus 316 P~a~avg~aVL~Vi-----kee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV-RG~GLm~GvE~V~dk~---------~~ 380 (442)
T KOG1404|consen 316 PVACAVGLAVLKVI-----KEENLQENAAEVGSYLLEKLAALKDKHPIIGDV-RGRGLMLGVELVSDKS---------EP 380 (442)
T ss_pred chhHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHHHHhhcCCceeec-ccceeEEEEEEecccC---------CC
Confidence 4433 334445544 246888888889999999987752 34455543 1223333333332210 01
Q ss_pred CCC---ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHH
Q 043646 436 KPL---HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFI 512 (625)
Q Consensus 436 ~~l---~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~l 512 (625)
.+. ....+.+... ++|+.+.-|.. ....+||++++..|++|+|++
T Consensus 381 ~pp~~~~~~~i~~~ck-e~Gvlvg~g~i-------------------------------~G~vfriaPPlciT~edi~f~ 428 (442)
T KOG1404|consen 381 KPPATAEGAVIGEQCK-ELGVLVGKGGI-------------------------------HGNVFRIAPPLCITKEDIDFA 428 (442)
T ss_pred CCcchHHHHHHHHHHH-HhCeeeecccc-------------------------------cceEEEecCCeeccHHHHHHH
Confidence 111 1335566663 47998854432 236899999999999999888
Q ss_pred HHHH
Q 043646 513 LAAL 516 (625)
Q Consensus 513 l~aL 516 (625)
++..
T Consensus 429 ~~~~ 432 (442)
T KOG1404|consen 429 VEYF 432 (442)
T ss_pred HHHH
Confidence 8855
No 376
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.22 E-value=1.7e-09 Score=113.87 Aligned_cols=319 Identities=14% Similarity=0.094 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccC-CCCceEEEEcC-------CCCch-
Q 043646 123 VHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLR-DEERWVVFLGP-------YEHHS- 193 (625)
Q Consensus 123 ~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~-~gd~~~Vlv~~-------~~h~s- 193 (625)
+.++++.+++++|.+ .+++|-+|..+.. .+...+ ++ +|++ +.+.. ..|+-
T Consensus 76 v~~Lee~vael~G~E---~alpthqGRgaE~-Il~~~~---------------~~~~g~e--~g~~~~~~~v~hn~~fet 134 (467)
T TIGR02617 76 YYALAESVKNIFGYQ---YTIPTHQGRGAEQ-IYIPVL---------------IKKREQE--KGLDRSKMVAFSNYFFDT 134 (467)
T ss_pred HHHHHHHHHHHhCCc---eEEECCCCchHHH-HHHHhh---------------ccccccc--ccccccccccceEEEEec
Confidence 456889999999986 4577756654432 333333 23 4554 33222 22222
Q ss_pred hHHHHHHcCCeEEEEecC----------CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCc-cccccC---HHHHHHHH
Q 043646 194 NLLSWRQSLAEVVEIGLD----------DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNV-TGIYSD---TRSIARLL 259 (625)
Q Consensus 194 ~~~~~~~~G~~vv~v~~~----------~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~-TG~~~~---l~~I~~la 259 (625)
........|+.++.++.+ ..|.+|+++|+++|.++. .++...+..+-.+|. -|...| ++++.++|
T Consensus 135 t~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g-~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la 213 (467)
T TIGR02617 135 TQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG-PNNVPYIVATITCNSAGGQPVSLANLKAVYEIA 213 (467)
T ss_pred chHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC-CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHH
Confidence 223355678887765322 258999999999998521 122333333333444 466666 57889999
Q ss_pred HHcCCEEEEeccC----cC-------CCccccCCCCC---CCCCcEEEEcCCCCCCCCCCceEEEEecc---c-cc-cCC
Q 043646 260 HQYGGFACFDFAA----SG-------PYVKINLRSRN---IDGYDAIFLATHKFLGGPGTPGILLISKA---L-YQ-LGS 320 (625)
Q Consensus 260 ~~~g~~vivD~A~----~~-------g~~~id~~~~~---~~~~D~v~~S~hK~lggp~g~G~l~v~~~---~-~~-l~~ 320 (625)
++||+.+|+|+|- +. ++...+++++. ...+|.+++|+.|-+|.|.| |+|+.+++ . +. .+.
T Consensus 214 ~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~ 292 (467)
T TIGR02617 214 KKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRT 292 (467)
T ss_pred HHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHh
Confidence 9999999999972 21 34444443321 24789999999999999987 88898877 2 11 111
Q ss_pred CCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 321 SPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 321 ~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
+...+.|. ...|..+.-.+ .+++.-+.+....+.+..|..+ .+|+.++|.+. |
T Consensus 293 ~~i~~EGf-----------------------~tYGGlagrd~--ea~a~Gl~e~~~~~yl~~ri~q-v~yl~~~L~~~-G 345 (467)
T TIGR02617 293 LCVVQEGF-----------------------PTYGGLEGGAM--ERLAVGLYDGMNLDWLAYRINQ-VQYLVNGLEEI-G 345 (467)
T ss_pred hcccccCC-----------------------cCcCchhHHHH--HHHHhhhhhcccHHHHHHHHHH-HHHHHHHHHhC-C
Confidence 11112111 11232222222 2233223344445556655554 88899998764 5
Q ss_pred EEEeCCCCCCCcceEEEEe----ccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeee-cCCCCCchhhHhhhcCChh
Q 043646 401 IQVLGNTSVKRQAILSFLV----YSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQAR-GGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 401 v~v~~~~~~~~~~i~~f~~----~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~-~G~~~~~~~~~~~l~~~~~ 475 (625)
+-++. . +++-.|.- +|.. ......+..++..|-.+.||... -|+. .++-+..
T Consensus 346 vpi~~-~----Gghav~iDa~~~lphi----------p~~~fpa~al~~~ly~~~GiR~~e~G~~--------~~~rd~~ 402 (467)
T TIGR02617 346 VVCQQ-A----GGHAAFVDAGKLLPHI----------PADQFPAHALACELYKVAGIRAVEIGSL--------LLGRDPK 402 (467)
T ss_pred CcEEe-c----CccEEEEehhhhCCCC----------ChhhCcHHHHHHHHHHHcCcceEeecce--------ecccCCC
Confidence 54443 2 23334431 1211 11122344566666566777532 1221 1111100
Q ss_pred hHHHHHHHHHhCCCCCC--CcEEEEecC-CCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 476 RSLEIRSAIQKGYLGVK--PGWTRITFP-YYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~--~g~iRis~~-~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
.. +-.. -..+|+.++ -.-|.+.+|.++++|..+.++...
T Consensus 403 ~~-----------~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 403 TG-----------KQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred CC-----------ccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhh
Confidence 00 0001 267999996 333789999999999999887654
No 377
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=4.9e-09 Score=106.71 Aligned_cols=327 Identities=16% Similarity=0.181 Sum_probs=194.3
Q ss_pred EeccCCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH-HhCCCCC----CcE--EEeCChHHH
Q 043646 79 TYADHTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKR-CLGGGQA----DAI--IFCGAGTTA 151 (625)
Q Consensus 79 ~Yld~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~-~~g~~~~----~~v--ift~sGtta 151 (625)
+|-|-.+-.|..+.|.++-...+.. +.+..|-.-.+... ..+.+++ +||.+.+ +.+ +=| .|.|.
T Consensus 35 vY~de~Gk~pvl~aV~~Ae~~l~~~----~~~k~Yl~i~G~~~----f~~~~~~llFG~d~~~l~~~Rv~t~Qt-~GGTG 105 (396)
T COG1448 35 VYKDEDGKTPVLRAVKKAEKRLLEQ----EKTKNYLPIEGLPE----FLEAVQKLLFGADSPALAEDRVATVQT-LGGTG 105 (396)
T ss_pred eeeCCCCCcchhHHHHHHHHHhhcc----ccccccCCcCCcHH----HHHHHHHHhcCCCcHHHHhhhHhheec-CCcch
Confidence 7889999899888888876554422 11111111112222 3333334 4564411 122 233 46677
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecC-C-CCCCCHHHHHHHHHHhh
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLD-D-NGLLDIEALRSQLELYK 229 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~-~-~~~ld~~~L~~~l~~~~ 229 (625)
||...+..+-. ..+.. .|.+++++|+.....+...|.+|..+|.= . +..+|.+.+.+.|+..
T Consensus 106 AL~~~A~fl~~-------------~~~~~--~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a- 169 (396)
T COG1448 106 ALRVAADFLAR-------------FFPDA--TVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA- 169 (396)
T ss_pred HHHHHHHHHHH-------------hCCCc--eEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC-
Confidence 78887776631 23333 49999999999988899999999999863 3 4469999998888742
Q ss_pred hCCCCeEEEE-ecccCccccccC---HHHHHHHHHHcCCEEEEeccC-cCCCccccCCCC-----CCCCC-cEEEEcCCC
Q 043646 230 AAKRPMLGSF-SACSNVTGIYSD---TRSIARLLHQYGGFACFDFAA-SGPYVKINLRSR-----NIDGY-DAIFLATHK 298 (625)
Q Consensus 230 ~~~~~~lv~~-~~~~n~TG~~~~---l~~I~~la~~~g~~vivD~A~-~~g~~~id~~~~-----~~~~~-D~v~~S~hK 298 (625)
+...+|++ .-||||||.-.. .++|+++.++.|.+.++|-|+ +++. .++-+.. -..+. =+++.|++|
T Consensus 170 --~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-GleeDa~~lR~~a~~~~~~lva~S~SK 246 (396)
T COG1448 170 --PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD-GLEEDAYALRLFAEVGPELLVASSFSK 246 (396)
T ss_pred --CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-chHHHHHHHHHHHHhCCcEEEEehhhh
Confidence 23334444 556799998755 467999999999999999993 3322 2322111 01122 467789999
Q ss_pred CCCCCCC--ceEEEE-eccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--H------HHH
Q 043646 299 FLGGPGT--PGILLI-SKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--R------AAL 367 (625)
Q Consensus 299 ~lggp~g--~G~l~v-~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~------aal 367 (625)
.|| -+| +|++.+ .++....... ..++.. ..|-...+|+-.+.. + .--
T Consensus 247 nfg-LYgERVGa~~vva~~~~~a~~v--------------------~sqlk~-~iR~~ySnPP~~Ga~vva~IL~~p~Lr 304 (396)
T COG1448 247 NFG-LYGERVGALSVVAEDAEEADRV--------------------LSQLKA-IIRTNYSNPPAHGAAVVATILNNPELR 304 (396)
T ss_pred hhh-hhhhccceeEEEeCCHHHHHHH--------------------HHHHHH-HHHhccCCCchhhHHHHHHHhCCHHHH
Confidence 997 443 565543 3222000000 001111 122233444433321 1 112
Q ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC-C--cEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHH
Q 043646 368 AFWVKEYIGYEVIKKQEDVYIESALGRILPN-Q--NIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVA 444 (625)
Q Consensus 368 ~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l-~--gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~ 444 (625)
+.|.++ .+.+++|+..++..+.+.|++. + .+..+.. +.+.|+|. +++..+|.
T Consensus 305 a~W~~E---l~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~----Q~GMFsy~------------------Gls~~QV~ 359 (396)
T COG1448 305 AEWEQE---LEEMRQRILEMRQALVDALKALGAPRNFDFIIS----QRGMFSYT------------------GLSPEQVD 359 (396)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh----cCceeecC------------------CCCHHHHH
Confidence 333333 4577888999999999999763 1 2444433 44666553 23455555
Q ss_pred HHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 445 TLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 445 ~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
+ |.++|||.+.. .| ||++.- .++..|++++++|.++
T Consensus 360 r-Lree~~IY~v~-----------------------------------sG--Ri~vaG-l~~~ni~~va~ai~~v 395 (396)
T COG1448 360 R-LREEFGIYLVA-----------------------------------SG--RINVAG-LNTSNIDYVAKAIAAV 395 (396)
T ss_pred H-HHHhccEEEec-----------------------------------CC--eeeecc-CChhhHHHHHHHHHhh
Confidence 4 55889999862 24 888853 5779999999999875
No 378
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.17 E-value=2.4e-08 Score=108.57 Aligned_cols=210 Identities=14% Similarity=0.067 Sum_probs=117.1
Q ss_pred CccccCCCCCCceEeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCC
Q 043646 66 DVEFDYSFGKRRLTYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQA 139 (625)
Q Consensus 66 ~~~~~~p~g~~~~~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~ 139 (625)
+..+++..| .-|+|.. ..|...+.|.+++.+++..... . .+ ......++.+.|++++.. .
T Consensus 39 G~~l~D~dG---~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~---~-~~-----~~~~~~~la~~l~~~~p~-~- 104 (431)
T PRK06209 39 GAHVWDVDG---NEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN---F-TR-----PSAIELDAAESFLELIDG-A- 104 (431)
T ss_pred CCEEEeCCC---CEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC---C-CC-----CCHHHHHHHHHHHHhCCc-c-
Confidence 344444444 3488864 3456678999999998864321 1 00 122233566777777642 2
Q ss_pred CcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhHHHHH-----HcCCe------EEE
Q 043646 140 DAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNLLSWR-----QSLAE------VVE 207 (625)
Q Consensus 140 ~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~-----~~G~~------vv~ 207 (625)
+.+.|+.+|+.+.-.++-.++. . .|.+ .|+.. ...|++...... ..|.. +..
T Consensus 105 ~~v~f~~sGseA~e~AlklAr~--------------~-tgr~-~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~ 168 (431)
T PRK06209 105 DMVKFCKNGSDATSAAVRLARA--------------Y-TGRD-LVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVT 168 (431)
T ss_pred ceEEEecCHHHHHHHHHHHHHH--------------H-hCCC-eEEEeccCccccccccccccCCCCCCCChhHhccccc
Confidence 3789998888874444333321 1 1222 34432 112221110000 00110 111
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccc--cCCC-C
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKI--NLRS-R 284 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~i--d~~~-~ 284 (625)
++ .-|+++|++++.+ ..+++.+|++.......+....+++|.++|++||+++|+|+++. |.... .... .
T Consensus 169 ~~-----~~d~~~l~~~l~~--~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~ 240 (431)
T PRK06209 169 FR-----YNDIASLEALFED--HPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLY 240 (431)
T ss_pred cC-----CCCHHHHHHHHHh--CCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHh
Confidence 11 2378999999874 22356788887665443333448999999999999999999974 32111 0111 1
Q ss_pred CCCCCcEEEEcCCCCCCCCCCceEEEEecccc
Q 043646 285 NIDGYDAIFLATHKFLGGPGTPGILLISKALY 316 (625)
Q Consensus 285 ~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~ 316 (625)
+. .+|+++++ |.+|+...+|++++++++.
T Consensus 241 gv-~PDi~t~g--K~lggG~p~~av~~~~~i~ 269 (431)
T PRK06209 241 GI-VPDLSCFG--KALGNGFAVSALAGKREYM 269 (431)
T ss_pred CC-Ccceeeeh--hhhcCCcccEEEEEHHHHH
Confidence 11 46886665 9997643468888888773
No 379
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.17 E-value=3.1e-08 Score=114.02 Aligned_cols=226 Identities=13% Similarity=0.036 Sum_probs=132.3
Q ss_pred HHHHHHHHHh---hhCCCCeEEEEecc-cCccccccC----HHHHHHHHHHcCCEEEEeccCcCC-Ccc--ccCCCCCCC
Q 043646 219 EALRSQLELY---KAAKRPMLGSFSAC-SNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-YVK--INLRSRNID 287 (625)
Q Consensus 219 ~~L~~~l~~~---~~~~~~~lv~~~~~-~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g-~~~--id~~~~~~~ 287 (625)
+.+++.|.+. ...+++.+|++..+ ....|.+.+ +++|.++|++||+++|+|+++..- -.. .....++.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 4566666521 11245778888874 677788865 789999999999999999996632 111 11111111
Q ss_pred CCcEEEEcCCCCCCCC-CCceEEEEeccccccCCCC-C----cccCCceEEeeccccccccccccchhhhhcCCChhHHH
Q 043646 288 GYDAIFLATHKFLGGP-GTPGILLISKALYQLGSSP-P----STCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQ 361 (625)
Q Consensus 288 ~~D~v~~S~hK~lggp-~g~G~l~v~~~~~~l~~~~-p----~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~ 361 (625)
.+|+++++ |.++|. ..+|+++++++++. .+. + .+..+.| ..|.|-.++
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~--~f~~~~~~~~~~hg~T----------------------y~gnpl~cA 699 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATEEVFE--AFRGPSKLDALLHGHS----------------------YTAHPMGCA 699 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcHHHHH--hhccccccCCcccCCC----------------------CCcCHHHHH
Confidence 57999988 999765 35799999998843 221 0 0001111 123344444
Q ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhh----CCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCC
Q 043646 362 MIRAALAFWVKEYIGYEVIKKQEDVYIESALGRI----LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKP 437 (625)
Q Consensus 362 ~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L----~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~ 437 (625)
+..+.++++.. ..-.+.+.++...+.+++.+.| .+.|.+.=+. ..+.++.+.+..+. ...+
T Consensus 700 aala~L~~~~~-~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR----g~Gl~~~iel~~~~----------~~~~ 764 (817)
T PLN02974 700 AAAKALQWYKD-PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV----SLGTVLALELDAEG----------SGSG 764 (817)
T ss_pred HHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE----eeeeEEEEEEecCC----------cccc
Confidence 44566666521 1123355555555555555444 4445432111 13344555443321 0011
Q ss_pred CC---hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHH
Q 043646 438 LH---GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILA 514 (625)
Q Consensus 438 l~---~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~ 514 (625)
.. ...+.+.+..++||.+++. .+.+|+.+++.+++++++++++
T Consensus 765 ~~~~~a~~v~~~~~~~~Gl~~r~~----------------------------------Gnvi~l~pP~~i~~e~l~~~~~ 810 (817)
T PLN02974 765 YSSLYARSVVRRLRREDGIYARPL----------------------------------GNVVYLMCGPTTSPETCTRLLR 810 (817)
T ss_pred cchHHHHHHHHHHHHhCCEEEEec----------------------------------CCEEEEeCCCCCCHHHHHHHHH
Confidence 11 2456677752479999831 2679999999999999999999
Q ss_pred HHHHHH
Q 043646 515 ALEFIA 520 (625)
Q Consensus 515 aL~~~~ 520 (625)
+|.+.+
T Consensus 811 ~l~~~~ 816 (817)
T PLN02974 811 KVYRRL 816 (817)
T ss_pred HHHHHh
Confidence 998754
No 380
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.15 E-value=4e-09 Score=102.41 Aligned_cols=339 Identities=15% Similarity=0.164 Sum_probs=215.4
Q ss_pred CcchHHHHHHHHHhhCCCCCCCC--CCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTH--TSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITV 164 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~--~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~ 164 (625)
...|.+|+..+.+.+..+.+-.- .+.++.+.....+++..+..+.++++.+...+|+|..+|.|.-+..+..-+-
T Consensus 16 Aklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~--- 92 (370)
T KOG2790|consen 16 AKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLI--- 92 (370)
T ss_pred ccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhh---
Confidence 45688888888888876533211 1224566778889999999999999999887888776665553443332221
Q ss_pred cchhhhhhhhccCCCC-ceEEEEcCCCCchhHHHHHHcCC-eEEEEecCC-C-C-CCCHHHHHHHHHHhhhCCCCeEEEE
Q 043646 165 PSIMRDKLITSLRDEE-RWVVFLGPYEHHSNLLSWRQSLA-EVVEIGLDD-N-G-LLDIEALRSQLELYKAAKRPMLGSF 239 (625)
Q Consensus 165 ~~~~~~~~~~~l~~gd-~~~Vlv~~~~h~s~~~~~~~~G~-~vv~v~~~~-~-~-~ld~~~L~~~l~~~~~~~~~~lv~~ 239 (625)
+++.|+ -.-|++...+--+...+ ...|. ..+..+... . | ..|.+.++. + ++-+.|.+
T Consensus 93 ----------glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~-----~da~yvyy 154 (370)
T KOG2790|consen 93 ----------GLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL--N-----PDASYVYY 154 (370)
T ss_pred ----------ccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc--C-----CCccEEEE
Confidence 123331 12466655444443322 23343 233344333 1 2 345544432 1 45679999
Q ss_pred ecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccC
Q 043646 240 SACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLG 319 (625)
Q Consensus 240 ~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~ 319 (625)
|...+..|+-.+.-. +-.-+|+.++.|-.+-+-..++|+..+ ++++...+|..| |.|+-++++++++ +.
T Consensus 155 CaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk~-----gvi~aGAQKN~G-~aG~Tvvivr~dl--lg 223 (370)
T KOG2790|consen 155 CANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSKF-----GVIFAGAQKNVG-PAGVTVVIVRKDL--LG 223 (370)
T ss_pred ecCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchhc-----ceEEeccccccC-ccccEEEEEehhh--hc
Confidence 999889998643222 223468999999987777889999854 889999999987 8888899999998 33
Q ss_pred CC---CCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH--HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHh
Q 043646 320 SS---PPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI--RAALAFWVKEYIGYEVIKKQEDVYIESALGR 394 (625)
Q Consensus 320 ~~---~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~--~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~ 394 (625)
.. .|.... |........-..||+..++. ...+++++ +..|.+.+.+...+.++.+++.
T Consensus 224 ~~~~~tP~v~d----------------yk~~~~NnSlyNTpP~f~iy~~~Lv~~~il-~~GGl~a~e~~n~~KskllYd~ 286 (370)
T KOG2790|consen 224 NALDITPSVLD----------------YKIMDKNNSLYNTPPCFGIYVMGLVFEWIL-EKGGLAAMEKLNQEKSKLLYDA 286 (370)
T ss_pred ccccCCccccc----------------eeeeccccccccCCCeeeeeehhhHHHHHH-hcccHHHHHHHHHHHHHHHHHH
Confidence 32 222211 11111222334677777664 45566654 6688999999988899999999
Q ss_pred hCCCCcEEEeCCCC--CCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcC
Q 043646 395 ILPNQNIQVLGNTS--VKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAF 472 (625)
Q Consensus 395 L~~l~gv~v~~~~~--~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~ 472 (625)
|.+..|+-.- |.+ .+..-++.|.+-++ .+..+++.+.. +++=|++.
T Consensus 287 iD~s~gfy~c-pVe~~~RS~MNV~Fri~~d--------------~Le~eFLkeA~-~~~mv~LK---------------- 334 (370)
T KOG2790|consen 287 IDNSNGFYRC-PVEPSVRSRMNVPFRIEKD--------------ELEAEFLKEAA-KEHMVQLK---------------- 334 (370)
T ss_pred HHhcCCeEEc-ccchhhhhhcccceeecch--------------HHHHHHHHHHH-Hhhhhccc----------------
Confidence 9887666432 222 23345677877543 23444555544 44445543
Q ss_pred ChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 473 DQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 473 ~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
||.. -|.+|.|+--..+-++++.|++.++++.+.
T Consensus 335 --------------GhRS--VGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 335 --------------GHRS--VGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred --------------cccc--cccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 2222 377999998888999999999999987653
No 381
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.12 E-value=6.6e-11 Score=121.20 Aligned_cols=196 Identities=19% Similarity=0.180 Sum_probs=41.4
Q ss_pred CcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccc
Q 043646 87 GRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPS 166 (625)
Q Consensus 87 ~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~ 166 (625)
++.++.+.+++.+.... |.|-.. +-..|..- .-+..+.+.+++++|+... +++ ++..+++.+++..+.
T Consensus 16 s~l~~~a~~a~~~~a~~-Y~nLE~-dl~~G~Rg-~R~~~v~~ll~~ltgAeaA---~Vv-NnnaAAv~L~l~~la----- 83 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASG-YSNLEY-DLETGKRG-SRYAHVEELLCELTGAEAA---LVV-NNNAAAVLLALNTLA----- 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccc-cccccc-cccccccc-ccccccccccccccccccc---ccc-ccccccccccccccc-----
Confidence 45567777777654432 222211 01111111 1245577888999998744 454 455566666655552
Q ss_pred hhhhhhhhccCCCCceEEEEcCCCCchhH------HHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEe
Q 043646 167 IMRDKLITSLRDEERWVVFLGPYEHHSNL------LSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFS 240 (625)
Q Consensus 167 ~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~------~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~ 240 (625)
+|.+ |+++..+-.-+- ..++..|+++++|... ....+++++++|+ ++|.++...
T Consensus 84 -----------~~~E--vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~-----e~Ta~ll~V 143 (367)
T PF03841_consen 84 -----------KGKE--VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--NRTHLSDYEKAIT-----ENTAALLKV 143 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------cccc--cccccccccccccccccccccccccccccccccc--ccccccccccccc-----ccccccccc
Confidence 3433 777654443222 3456689999988764 3456788999998 689999999
Q ss_pred cccCcc--ccc--cCHHHHHHHHHHcCCEEEEeccCc---------CCCccccCCCCCCCCCcEEEEcCCCCCCCCCCce
Q 043646 241 ACSNVT--GIY--SDTRSIARLLHQYGGFACFDFAAS---------GPYVKINLRSRNIDGYDAIFLATHKFLGGPGTPG 307 (625)
Q Consensus 241 ~~~n~T--G~~--~~l~~I~~la~~~g~~vivD~A~~---------~g~~~id~~~~~~~~~D~v~~S~hK~lggp~g~G 307 (625)
|.+|.. |.. .+++++++++|+||+++++|.+++ .+. ..++.+.-..|+|.++||+.|.+|||. .|
T Consensus 144 h~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~-Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aG 221 (367)
T PF03841_consen 144 HTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD-EPTVQEYLAAGADLVTFSGDKLLGGPQ-AG 221 (367)
T ss_dssp -----------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEETTSSSSS-S--E
T ss_pred cccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-ccHHHHHhhcCCCEEEEECCCcCCCCC-eE
Confidence 988873 433 579999999999999999999863 222 233444434599999999999999999 59
Q ss_pred EEEEecccc
Q 043646 308 ILLISKALY 316 (625)
Q Consensus 308 ~l~v~~~~~ 316 (625)
+++.++++.
T Consensus 222 iI~Gkk~lI 230 (367)
T PF03841_consen 222 IIVGKKELI 230 (367)
T ss_dssp EEEEEHHHH
T ss_pred EEEeCHHHH
Confidence 999999984
No 382
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=1.3e-08 Score=103.11 Aligned_cols=339 Identities=14% Similarity=0.087 Sum_probs=199.1
Q ss_pred HHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhh
Q 043646 91 RYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRD 170 (625)
Q Consensus 91 ~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~ 170 (625)
+.+.+.....+.++. -+++.-.--+++.+..-.+++.|++++|+.. .|++. .|-+ ++.....++
T Consensus 111 ~~ike~a~~~lrkyG--vGsCGPrGFYGt~DvHldlE~~iakF~G~E~--aivYs-~gF~-ti~S~ipaf---------- 174 (467)
T KOG1358|consen 111 EEIKEEASFTLRKYG--VGSCGPRGFYGTIDVHLDLEKRIAKFMGTED--AIVYS-YGFS-TIESAIPAF---------- 174 (467)
T ss_pred HHHHHHHHHHHHHhC--CCCcCCCcccccceeecccHHHHHHhhCCcc--eeeec-cccc-hhhhcchhh----------
Confidence 455555555555441 1111111113355666678999999999974 47774 4444 355555555
Q ss_pred hhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhh----hCCC----CeEEEEecc
Q 043646 171 KLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYK----AAKR----PMLGSFSAC 242 (625)
Q Consensus 171 ~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~----~~~~----~~lv~~~~~ 242 (625)
...|| +|++....+..+..+++...-.+++...+ |+++|+..+.+.. ..++ -+.+++...
T Consensus 175 -----sKrGD--Ii~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl 242 (467)
T KOG1358|consen 175 -----SKRGD--IIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGL 242 (467)
T ss_pred -----hccCc--EEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEee
Confidence 25677 68888888888888888777777777754 7888877664311 1112 357888899
Q ss_pred cCccccccCHHHHHHHHHHcCCEEEEeccCcCCCcccc---CCC---CCCCCCcEEEEcCCCCCCCCCCceEEEEecccc
Q 043646 243 SNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVKIN---LRS---RNIDGYDAIFLATHKFLGGPGTPGILLISKALY 316 (625)
Q Consensus 243 ~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~id---~~~---~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~ 316 (625)
.-+||.+.|+.+|.++..+|...+++|+..++|...-. +.+ .....+|++++|..-.++.-+ |+...+.-..
T Consensus 243 ~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G--gFc~G~~~i~ 320 (467)
T KOG1358|consen 243 YANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG--GFCAGKSFIA 320 (467)
T ss_pred ccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC--ceeecceeeE
Confidence 99999999999999999999999999999887654321 111 012367999999877765332 5555533332
Q ss_pred ccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH-HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhh
Q 043646 317 QLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI-RAALAFWVKEYIGYEVIKKQEDVYIESALGRI 395 (625)
Q Consensus 317 ~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~-~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L 395 (625)
..+++ .|.+ .-|.+..|+.+... ..++... + ... .+.+..+.....+.+.|
T Consensus 321 ~hQrL----Sg~~--------------------Y~fSAslPp~la~aa~~ai~i~--~-~~p-~~~~~L~~k~~~~H~~l 372 (467)
T KOG1358|consen 321 DHQRL----SGSG--------------------YCFSASLPPYLAGAAIKAILIE--E-WNP-EIVQPLRAKVAKFHAAL 372 (467)
T ss_pred eeeec----cccc--------------------eeeeccCchhhhhhHHHHHHHH--h-hCc-chhhhhhccccccchhh
Confidence 11111 1112 12344566655432 1222222 1 111 24444555556677778
Q ss_pred CCCCcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChh
Q 043646 396 LPNQNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQT 475 (625)
Q Consensus 396 ~~l~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~ 475 (625)
+...++.+.+.. -+|++-........+. ..+.. + -.++++....+ ++.+...
T Consensus 373 ~~~s~~~v~~~~---~SPi~hl~l~~~~~s~-----e~e~~-l-L~eivd~~i~~-~~ll~~a----------------- 424 (467)
T KOG1358|consen 373 SSNSGFIVSGSP---ESPIIHLQLERSYGSR-----EKEEK-L-LEEIVDKCIAE-GVLLTRA----------------- 424 (467)
T ss_pred hcCCceEEecCc---CCceeeeeecccccch-----HHHHH-H-HHHHHHHHHhh-cceehhh-----------------
Confidence 777788887764 4566666554422100 00000 0 12334443333 4544311
Q ss_pred hHHHHHHHHHhCCCCCC-CcEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 476 RSLEIRSAIQKGYLGVK-PGWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 476 ~~~~~~~~~~~g~~g~~-~g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
.+..+.+-.+ +-.+||++...++++|++++.+.|++++..
T Consensus 425 -------~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 425 -------KYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred -------hhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 1111111112 457999999999999999999999988654
No 383
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.08 E-value=2.2e-07 Score=95.32 Aligned_cols=285 Identities=18% Similarity=0.122 Sum_probs=164.6
Q ss_pred ccccCCCCCCceEeccCCC------CCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHTA------SGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~~------~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+.+|.|.+ |+|..+ .+...+++.+++.+.+..+. |+ .+..++...-++.+.+.+..+-...+
T Consensus 48 ~kl~D~~g~E---yiD~~ssw~~~~~Ghanpev~ral~~q~~k~~---hs----~~~~~t~eav~l~~~l~~~~~~~~~~ 117 (433)
T KOG1401|consen 48 SKLFDPDGKE---YIDFTSSWAVTILGHANPEVARALAEQAKKLG---HS----SNGYFTLEAVELEEVLSAVLGKGSAE 117 (433)
T ss_pred eeeecCCcce---eeeeccceeccccCCCCHHHHHHHHHHHhhhe---ec----cCccccHHHHHHHHHHHhcccCCCcc
Confidence 3444466643 676544 34557899999988876531 11 11112222445667777777665555
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCce-EEEEcCCCCchhHHHHHHcCCeEEEEecC---CC---
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERW-VVFLGPYEHHSNLLSWRQSLAEVVEIGLD---DN--- 213 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~-~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~---~~--- 213 (625)
.|.|+.|||+|+..+|-.++-.... -.+.++. .|-+...+|.-...++...+..-...|.+ ++
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~----------~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~ 187 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGK----------KHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVT 187 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcc----------cCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceee
Confidence 8999999999966666555421110 0122222 44455555655544444222211111111 10
Q ss_pred -CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcC-CCcccc-CCCCCC
Q 043646 214 -GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASG-PYVKIN-LRSRNI 286 (625)
Q Consensus 214 -~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~-g~~~id-~~~~~~ 286 (625)
..-|+.+|++.++.+ .+...+|++....-..|.+.. +..|..+|+++|+++|.|+++.. +-.... ..+.-.
T Consensus 188 ~~ynd~t~l~k~~~~h--~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~ 265 (433)
T KOG1401|consen 188 AEYNDSTALEKLFESH--KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFG 265 (433)
T ss_pred cccCCHHHHHHHHHhC--CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhC
Confidence 123789999999853 235789999998877787733 67899999999999999999763 211110 000000
Q ss_pred CCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcc--cCCceEEeeccccccccccccchhhhhcCCChhHHHHHH
Q 043646 287 DGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPST--CGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMIR 364 (625)
Q Consensus 287 ~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~--~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~ 364 (625)
-.+|+.++. |.+++...+|+.++++++. +.+.|-- +.|++ -.|.|-.+....
T Consensus 266 ~~PDI~t~a--K~L~gGlPigA~~v~~kV~--~~i~~~~~l~hg~T----------------------f~gnpLacsa~~ 319 (433)
T KOG1401|consen 266 VTPDITTVA--KPLGGGLPIGATGVRDKVA--EMISPGDHLYHGGT----------------------FSGNPLACSAGI 319 (433)
T ss_pred cCCcceeeh--hhccCCceeEEEeehHHHH--hhcCCCCccccCcc----------------------cCCChhhhhHHH
Confidence 156888776 9997766689999999983 3332211 11122 123344444434
Q ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCc
Q 043646 365 AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQN 400 (625)
Q Consensus 365 aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~g 400 (625)
.+++.+. +....+++.+....+++.+.+.+.+-+.
T Consensus 320 ~~l~~l~-~~e~~k~vs~~~k~L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 320 KVLDELK-DPETLKNVSKIGKELRKLLDEYLKKTPN 354 (433)
T ss_pred HHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 4455542 3344567777777788888888876543
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.03 E-value=1.2e-09 Score=112.76 Aligned_cols=169 Identities=17% Similarity=0.113 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWR 199 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~ 199 (625)
.+...+..-+-+..|.......+.+ ..+|. .|.+.+.++. .+|..+ .|+.+...|.|-.+++.
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~v-P~atgm~l~l~l~~l~--------------~r~~a~-~Viw~ridqkSc~kai~ 119 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVV-PMATGMSLTLCLLALR--------------MRPKAK-YVIWPRIDQKSCFKAIE 119 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEE-SS-HHHHHHHHHHHHH--------------HHCT---EEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccccceEEE-ecccccHHHHHHHHHh--------------cccCCc-eEEEeeccccchHHHHH
Confidence 3444455555667888754344555 34444 4544444442 023333 58999999999999999
Q ss_pred HcCCeEEEEecCC--C-CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC-HHHHHHHHHHcCCEEEEeccCcCC
Q 043646 200 QSLAEVVEIGLDD--N-GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD-TRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 200 ~~G~~vv~v~~~~--~-~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~-l~~I~~la~~~g~~vivD~A~~~g 275 (625)
..|.+++.|+... + -..|++.+++++++ .+..+.+.++++.+-.-|...| +++|+++|++||+..++-.|+++-
T Consensus 120 ~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~--~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ 197 (389)
T PF05889_consen 120 RAGLEPVVVENVLEGDELITDLEAIEAKIEE--LGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQ 197 (389)
T ss_dssp HTT-EEEEE-EEEETTEEEEHHHHHHHHHHH--HCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT
T ss_pred hcCCeEEEeeccCCCCeeeccHHHHHHHHHH--hCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhh
Confidence 9999999998532 2 25678899999874 2345688899999989998877 999999999999999999999882
Q ss_pred Cccc------cCCCCCCCCCcEEEEcCCCCCCCCCCceEEE
Q 043646 276 YVKI------NLRSRNIDGYDAIFLATHKFLGGPGTPGILL 310 (625)
Q Consensus 276 ~~~i------d~~~~~~~~~D~v~~S~hK~lggp~g~G~l~ 310 (625)
...+ ..+. ..+|+++-|.-|-|-.|-|-+.+.
T Consensus 198 ~~~~~~~i~~a~~~---GRvda~vqS~dkNF~VPvGgai~A 235 (389)
T PF05889_consen 198 SSKCMHLIQQAWRV---GRVDAFVQSTDKNFMVPVGGAIMA 235 (389)
T ss_dssp -HHHHHHHHHHHHH---STCSEEEEEHHHHHCEESSHEEEE
T ss_pred HHHHHHHHHHHHhc---CCcceeeeecCCCEEecCCCcEEE
Confidence 1110 0011 144555555556665555533333
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.01 E-value=5.4e-08 Score=98.79 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHhCCCCCCcEE---EeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHH-
Q 043646 122 MVHEASNYIKRCLGGGQADAII---FCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLS- 197 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~~~~~vi---ft~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~- 197 (625)
-.+.+.+-.|+.||++.. ++ |+ |||.+ |...+..+ ++|||+ .+.++-.-|-.....
T Consensus 55 GRd~le~iyA~vfgaE~A--LVRpq~v-SGTHA-i~~~Lfg~---------------LrpGD~-ll~~tG~PYDTL~~VI 114 (403)
T PF06838_consen 55 GRDKLERIYADVFGAEDA--LVRPQFV-SGTHA-IALALFGV---------------LRPGDE-LLSITGKPYDTLEEVI 114 (403)
T ss_dssp HHHHHHHHHHHHCT-SEE--EEETTS--SHHHH-HHHHHHHH-----------------TT-E-EEESSSS--CCHHHHH
T ss_pred cHHHHHHHHHHHhCchhh--hhccccc-chHHH-HHHHHHhc---------------CCCCCe-EEEcCCCchhhHHHHh
Confidence 355677788999999744 33 55 67776 44444443 689997 233333333333333
Q ss_pred ---------HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc----ccccCHHHHHHHHHHc--
Q 043646 198 ---------WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT----GIYSDTRSIARLLHQY-- 262 (625)
Q Consensus 198 ---------~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T----G~~~~l~~I~~la~~~-- 262 (625)
++..|++...|++.++|.+|.+.++++++ +++|+|.+.-..-.+ =.+.+++++++++|+.
T Consensus 115 G~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-----~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p 189 (403)
T PF06838_consen 115 GIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-----PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP 189 (403)
T ss_dssp TSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-----TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-T
T ss_pred CCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-----cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 24468899999999999999999999999 689999886432211 1124466666666664
Q ss_pred CCEEEEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCC---CCceEEEEeccccc
Q 043646 263 GGFACFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGP---GTPGILLISKALYQ 317 (625)
Q Consensus 263 g~~vivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp---~g~G~l~v~~~~~~ 317 (625)
+++++||.+++=-......... |+|++..|.-|..||. .| |++..+++++.
T Consensus 190 ~~iifVDNCYGEFvE~~EP~~v---GADl~aGSLIKNpGGgiAptG-GYIaGr~~lVe 243 (403)
T PF06838_consen 190 DVIIFVDNCYGEFVETQEPTEV---GADLMAGSLIKNPGGGIAPTG-GYIAGRKDLVE 243 (403)
T ss_dssp TSEEEEE-TTTTTTSSS-GGGG---T-SEEEEETTSGGGTTT-SS--EEEEESHHHHH
T ss_pred CeEEEEeCCcceeccccCcccc---chhheeccceeCCCCCccCcC-CEEechHHHHH
Confidence 7999999997644333333333 8999999999998763 44 89999998843
No 386
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.99 E-value=8e-08 Score=101.22 Aligned_cols=225 Identities=16% Similarity=0.095 Sum_probs=127.4
Q ss_pred ccccCCCCCCceEeccCC------CCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCC
Q 043646 67 VEFDYSFGKRRLTYADHT------ASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQAD 140 (625)
Q Consensus 67 ~~~~~p~g~~~~~Yld~~------~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~ 140 (625)
..+.+..| ..|+|.. ..|-..+.+.+++.+.+...... +.. ....+...++.++|.+.++...+
T Consensus 8 ~~l~d~dG---~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~-~~~-----~~~~~~~~~la~~L~~~~p~~~~- 77 (339)
T PF00202_consen 8 AYLWDVDG---REYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYV-SFS-----GFTHPEAAELAEKLAELFPGGLD- 77 (339)
T ss_dssp TEEEETTS---EEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSC-STT-----TSEEHHHHHHHHHHHHHSSTTEE-
T ss_pred CEEEECCC---CEEEECCCCccceecCCCccccchhHHHHhhhcccc-ccc-----ceeccchhhhhhhhhhccccccc-
Confidence 34444444 4588864 44556789999998877432111 100 11233456677888888854333
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc-CCCCchhHHHHHHc------------CCeEEE
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG-PYEHHSNLLSWRQS------------LAEVVE 207 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~-~~~h~s~~~~~~~~------------G~~vv~ 207 (625)
.+.|+.+|+++.-.++-.++.. ... ...++.. .|+.- ...|.....++... ...+..
T Consensus 78 ~v~f~~sGseAve~Alkla~~~-----~~~----~~~~~r~-~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~ 147 (339)
T PF00202_consen 78 RVFFANSGSEAVEAALKLARQY-----HNK----RAYTGRR-KILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVF 147 (339)
T ss_dssp EEEEESSHHHHHHHHHHHHHHH-----HHH----THHHTTT-EEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEE
T ss_pred eeeeccCchHHHHHHHHHhhcc-----ccc----ccccCCc-eEEEeeeeeeccCcccccccCCcccccccccccccccc
Confidence 8999988888833333322200 000 0122333 35544 44554443333321 124567
Q ss_pred EecCCCCC-----CCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCcCC-Cc
Q 043646 208 IGLDDNGL-----LDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAASGP-YV 277 (625)
Q Consensus 208 v~~~~~~~-----ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~~g-~~ 277 (625)
+|.+.... -....+++.+.+ ...++..+|++..+....|.+.+ +++|.++|++||+++|+|+++... -.
T Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRt 226 (339)
T PF00202_consen 148 VPFPDPAADEEEQACLNALEELIAA-LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRT 226 (339)
T ss_dssp EETTCHHHHHHHHHHHHHHHHHHHH-HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTT
T ss_pred ccCCccchhhhHHHHHHHHHHHHHh-hcCCcEEEEEEeccccccCccccccchhhehcccccccccceeccccccccccc
Confidence 77653110 011123333332 22356789999998888887754 799999999999999999997742 11
Q ss_pred c--ccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 278 K--INLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 278 ~--id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
. .....++. .+|+++++ |.+++...+|++++++++
T Consensus 227 G~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~i 263 (339)
T PF00202_consen 227 GKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEEI 263 (339)
T ss_dssp SSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHHH
T ss_pred CCccceecccc-cCcccccc--cchhhhhhcccccccchh
Confidence 1 11111111 57999998 999766668999999998
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.89 E-value=1.3e-06 Score=87.96 Aligned_cols=327 Identities=13% Similarity=0.109 Sum_probs=182.0
Q ss_pred HHHHHHHHHHhCCCCCCcEEEe--CChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH-HHHHH
Q 043646 124 HEASNYIKRCLGGGQADAIIFC--GAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL-LSWRQ 200 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~~vift--~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~~~~~ 200 (625)
..+++.+++.+|.. .++-| |-|+...+.-++.-.+ .-.||.+ .++.+..|.... .-...
T Consensus 82 ~~L~~avkdifGfq---~~iPthQGRgAE~Il~~i~ik~~-------------~~~pg~~--~~~~sN~~FdTTr~h~~~ 143 (471)
T COG3033 82 YALADAVKDIFGFQ---YTIPTHQGRGAENILIPILIKKG-------------EQEPGSK--MVAFSNYHFDTTRGHIQI 143 (471)
T ss_pred HHHHHHHHHhcCce---eeeeccCCccHHHHHHHHHhhhc-------------cccCCcc--ccccccceecchhHHHHh
Confidence 44677888899974 33433 3355554444433222 1246654 444444454443 33555
Q ss_pred cCCeEEEEecCC----------CCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc---cCHHHHHHHHHHcCCEEE
Q 043646 201 SLAEVVEIGLDD----------NGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY---SDTRSIARLLHQYGGFAC 267 (625)
Q Consensus 201 ~G~~vv~v~~~~----------~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~---~~l~~I~~la~~~g~~vi 267 (625)
.|+.++-+++++ .|.+|++.|++.|++-...+-|-++....+++.-|.- ..++++.++|++|++.++
T Consensus 144 ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv 223 (471)
T COG3033 144 NGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVV 223 (471)
T ss_pred cCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEE
Confidence 688777666542 3689999999999863221224444444555556665 457899999999999999
Q ss_pred EeccCcC-----------CCccccCCCC---CCCCCcEEEEcCCCCCCCCCCceEEEEeccc----cc-cCCCCCcccCC
Q 043646 268 FDFAASG-----------PYVKINLRSR---NIDGYDAIFLATHKFLGGPGTPGILLISKAL----YQ-LGSSPPSTCGG 328 (625)
Q Consensus 268 vD~A~~~-----------g~~~id~~~~---~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~----~~-l~~~~p~~~gg 328 (625)
.|++-.+ +|....++++ ....+|.++.|.-|=--.+.| |+|+++++. +. ++.+.-..
T Consensus 224 ~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~V~~--- 299 (471)
T COG3033 224 MDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEECRTLVVVQ--- 299 (471)
T ss_pred eehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHHHHHHHhheEee---
Confidence 9988332 2222222211 023578899999887655666 899998873 11 11110011
Q ss_pred ceEEeeccccccccccccchhhhhcCCChhHHHHH---HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeC
Q 043646 329 GTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI---RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLG 405 (625)
Q Consensus 329 g~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~---~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~ 405 (625)
.|.|..-++. -.+++.-+.+....+.++.|+.+ .+||.+.|.+. |+.|+-
T Consensus 300 -------------------------eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Q-v~YL~~~l~~~-GVpi~~ 352 (471)
T COG3033 300 -------------------------EGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQ-VQYLADGLEEA-GVPIVQ 352 (471)
T ss_pred -------------------------ccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHH-HHHHHHHHHhc-CCeeEe
Confidence 1112111111 12233333344445566655554 78899999886 777776
Q ss_pred CCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHH
Q 043646 406 NTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQ 485 (625)
Q Consensus 406 ~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 485 (625)
|. +++-.|.-....... .......+..++..|-.+.||.+..--.+. ++-+...-+
T Consensus 353 pa----GGHavfvda~~~lph------ip~eqFpaqala~ely~e~GiRavElG~~~-------~~rd~ktg~------- 408 (471)
T COG3033 353 PA----GGHAVFVDAGKFLPH------IPAEQFPAQALACELYKEAGIRAVELGSFS-------LGRDPKTGK------- 408 (471)
T ss_pred cC----CCceEEeehhhhcCC------CChhhCcHHHHHHHHHHHhCeeeeeeecee-------cccCCCccc-------
Confidence 64 355555432111000 011233456677777788898865321111 111100000
Q ss_pred hCCCCCCCcEEEEecC-CCCCHHHHHHHHHHHHHHHHhhhh
Q 043646 486 KGYLGVKPGWTRITFP-YYMSNEEFEFILAALEFIAAYGHR 525 (625)
Q Consensus 486 ~g~~g~~~g~iRis~~-~~~t~edid~ll~aL~~~~~~~~~ 525 (625)
. .--+-..+|+.++ ..-|.+.+|+++++++.+.+++..
T Consensus 409 -q-~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~~ 447 (471)
T COG3033 409 -Q-HPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAED 447 (471)
T ss_pred -c-CCCchheeeEeccccccchhHHHHHHHHHHHHHhcccc
Confidence 0 0001267999996 334789999999999999988744
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.32 E-value=1.4e-05 Score=78.74 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=111.6
Q ss_pred HHHHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHH------
Q 043646 124 HEASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLL------ 196 (625)
Q Consensus 124 ~~~~~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~------ 196 (625)
+.+.+-.|+.+|+...- ..-|. |||.+ |..++..+ |+|||+..-++..+ |-....
T Consensus 68 dtLe~vyA~vf~aE~a~VRpq~i-sGTHA-I~~aLfg~---------------LRpgDell~i~G~P-YDTLeevIG~rg 129 (416)
T COG4100 68 DTLERVYAQVFGAEAALVRPQII-SGTHA-IACALFGI---------------LRPGDELLYITGSP-YDTLEEVIGLRG 129 (416)
T ss_pred hHHHHHHHHHhccccceeeeeee-cchhH-HHHHHHhc---------------cCCCCeEEEecCCc-chhHHHHhccCC
Confidence 44667778999997652 33566 67776 43333222 68999843333333 222222
Q ss_pred ----HHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccC----ccccccCHHHHHHHHHHc--CCEE
Q 043646 197 ----SWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSN----VTGIYSDTRSIARLLHQY--GGFA 266 (625)
Q Consensus 197 ----~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n----~TG~~~~l~~I~~la~~~--g~~v 266 (625)
+++..|++-..+|+..+|.+|.+.++.++. ++||+|.+.-... |+=.+.+++++..+.++- ++++
T Consensus 130 ~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~-----~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~iv 204 (416)
T COG4100 130 EGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS-----DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIV 204 (416)
T ss_pred CCcccHHHhCcceeecccccCCcccHHHHHHhcC-----ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEE
Confidence 244567888899999999999999999998 6899988754321 233345677777777774 7999
Q ss_pred EEeccCcCCCccccCCCCCCCCCcEEEEcCCCCCCCCC--CceEEEEecccc
Q 043646 267 CFDFAASGPYVKINLRSRNIDGYDAIFLATHKFLGGPG--TPGILLISKALY 316 (625)
Q Consensus 267 ivD~A~~~g~~~id~~~~~~~~~D~v~~S~hK~lggp~--g~G~l~v~~~~~ 316 (625)
+||.+++--......... |+|++..|.-|.-||.- .-|++..+++++
T Consensus 205 FVDNCYGEFvE~~EPt~v---GaDliAGSLIKNpGGgiaktGGYiaGk~~~v 253 (416)
T COG4100 205 FVDNCYGEFVEEKEPTHV---GADLIAGSLIKNPGGGIAKTGGYIAGKAELV 253 (416)
T ss_pred EEeccchhhhhccCcccc---chhhhccceeeCCCCceeeccceeechHHHH
Confidence 999986643333333333 89999999999866541 237888888774
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.27 E-value=5.4e-05 Score=74.66 Aligned_cols=350 Identities=15% Similarity=0.108 Sum_probs=190.8
Q ss_pred CceEecc----CCCCCcchHHHHHHHHHhhCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHhCCCCCCcEEEeCChHHH
Q 043646 76 RRLTYAD----HTASGRSLRYIEDYIINNVLPFYGNTHTSDSYVGQRMTKMVHEASNYIKRCLGGGQADAIIFCGAGTTA 151 (625)
Q Consensus 76 ~~~~Yld----~~~~~~~p~~v~ea~~~~l~~~~~n~~~~~~~~~~~~~~~~~~~~~~ia~~~g~~~~~~vift~sGtta 151 (625)
+..-||| -+-.+.+.+.|+++....+.....|... ...++.+-+++..+.+-+.+ .+.|+.||+.+
T Consensus 45 ~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RF-------lhd~lv~cA~~l~stlPeLs---vc~F~NSGSEA 114 (452)
T KOG1403|consen 45 EGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRF-------LHDELVQCARTLTSTLPELS---VCFFVNSGSEA 114 (452)
T ss_pred CcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchh-------hHHHHHHHHHHHhhcCCCce---EEEEecCCchh
Confidence 3344665 2345677889999998888544333211 12445555555555554532 67899889988
Q ss_pred HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH-------cCC---eEEEE---ecCC--CC--
Q 043646 152 AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ-------SLA---EVVEI---GLDD--NG-- 214 (625)
Q Consensus 152 al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~-------~G~---~vv~v---~~~~--~~-- 214 (625)
+=..+-.+..+. ...| |++-+..|+..+.+..+ .|. ++.+| |..+ .|
T Consensus 115 NDLALRLAR~ft-------------khqD---vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~ 178 (452)
T KOG1403|consen 115 NDLALRLARNFT-------------KHQD---VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKF 178 (452)
T ss_pred hHHHHHHHHhhc-------------ccCc---eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccc
Confidence 544443333211 2334 44444444444333211 121 22222 2211 11
Q ss_pred -----------CCCHHHHHHHHHHhhhCC-CCeEEEEecccCccccccC----HHHHHHHHHHcCCEEEEeccCc-CCCc
Q 043646 215 -----------LLDIEALRSQLELYKAAK-RPMLGSFSACSNVTGIYSD----TRSIARLLHQYGGFACFDFAAS-GPYV 277 (625)
Q Consensus 215 -----------~ld~~~L~~~l~~~~~~~-~~~lv~~~~~~n~TG~~~~----l~~I~~la~~~g~~vivD~A~~-~g~~ 277 (625)
..-.+.+++.+.+..... ...+.+..+..+--|.+.| .+.+++..|.+|...|.|+++- +|-+
T Consensus 179 r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRv 258 (452)
T KOG1403|consen 179 RDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRV 258 (452)
T ss_pred ccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccccc
Confidence 122344555555322112 3345555666677788877 5789999999999999999964 2222
Q ss_pred cccCCCCCC--CCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCC
Q 043646 278 KINLRSRNI--DGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGG 355 (625)
Q Consensus 278 ~id~~~~~~--~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~g 355 (625)
.-....... --+|+++.. |-+|-...++++...+++.+ . +++..+.|.|- ..|
T Consensus 259 G~hyWafq~y~fiPDIVtmg--KpmGNGhPVa~VattkeIA~--A-----f~atgv~YFNT----------------yGG 313 (452)
T KOG1403|consen 259 GSHYWAFQTYNFIPDIVTMG--KPMGNGHPVAAVATTKEIAQ--A-----FHATGVEYFNT----------------YGG 313 (452)
T ss_pred chhhhhhhhhccccchheec--ccCCCCCeeeEEeccHHHHH--H-----hccccceehhc----------------cCC
Confidence 111111100 045777665 76665555788888887732 1 22222333332 134
Q ss_pred ChhHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCCcceEEEEecc--CCCCCCccccc
Q 043646 356 TPQIVQMIRAALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQ-NIQVLGNTSVKRQAILSFLVYS--TTNSSPENMKI 432 (625)
Q Consensus 356 t~~~~~~~~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~-gv~v~~~~~~~~~~i~~f~~~~--~~~~~~~~~~~ 432 (625)
.|-.+++..+.+... .-+++.++.+...+++...|+++. ..+++++. | ++-.|+-.+ .+.
T Consensus 314 nPVsCAv~laVm~v~-----e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDv---R-GvGLFiGIdLVkD~-------- 376 (452)
T KOG1403|consen 314 NPVSCAVGLAVMRVC-----EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDV---R-GVGLFIGIDLVKDR-------- 376 (452)
T ss_pred CchhHHHHHHHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHhhhccceecc---c-cceEEEeeeeeccc--------
Confidence 454444444444433 245778888888888888886642 34556553 2 222222211 110
Q ss_pred cCCCCC--ChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHH
Q 043646 433 ERNKPL--HGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFE 510 (625)
Q Consensus 433 ~~~~~l--~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid 510 (625)
..+++- ....++.+|.+.++|.+.+- |-..+.+.|-++..-++++++
T Consensus 377 ~tRtP~tk~A~~~v~rlke~y~VLlsaD-------------------------------GPh~NilKiKPPmCFneena~ 425 (452)
T KOG1403|consen 377 KTRTPDTKEAHWVVNRLKELYRVLLSAD-------------------------------GPHRNILKIKPPMCFNEENAD 425 (452)
T ss_pred ccCCCcHHHHHHHHHHHHHhhhEEEecC-------------------------------CCCCceeecCCCcccChhhHH
Confidence 011111 12356777878888888631 113477888888888999999
Q ss_pred HHHHHHHHHHHhhh
Q 043646 511 FILAALEFIAAYGH 524 (625)
Q Consensus 511 ~ll~aL~~~~~~~~ 524 (625)
+++..|.+++.-..
T Consensus 426 e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 426 EFVLGLDEILTVME 439 (452)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999876443
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.19 E-value=0.00011 Score=74.55 Aligned_cols=156 Identities=16% Similarity=0.101 Sum_probs=80.5
Q ss_pred HHHHHHHHhCC-CCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHc-C
Q 043646 126 ASNYIKRCLGG-GQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQS-L 202 (625)
Q Consensus 126 ~~~~ia~~~g~-~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~-G 202 (625)
..++|-+.+|- -.++ .|+| |+|+|+.+++++.+|.-.. -..+....||...+.|+++...-... .
T Consensus 51 ~Ir~LH~~VGNAvt~gr~IV~-GtGsTQL~~AalyALSp~~-----------~~~~~p~~VVa~aPYY~~Y~~qt~~f~s 118 (363)
T PF04864_consen 51 QIRRLHRVVGNAVTDGRYIVF-GTGSTQLFNAALYALSPNA-----------SPSSSPASVVAAAPYYSSYPEQTDFFDS 118 (363)
T ss_dssp HHHHHHHHH-SB--TTSEEEE-ECHHHHHHHHHHHHHCHHT------------TTSSSEEEEE-SS--CHHHHHCCCT-B
T ss_pred HHHHHHHHhccccccCcEEEE-cCCHHHHHHHHHHhcCCCC-----------CCCCCCceeEecCCCccchHHHHHhccc
Confidence 33344444543 2333 6777 5999999999998884210 02233345787888888775432211 1
Q ss_pred CeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCCc-cccC
Q 043646 203 AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPYV-KINL 281 (625)
Q Consensus 203 ~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~-~id~ 281 (625)
....+-.-..... . ...+.+-+=++++||||.|.+- +. +++.-+..+|.|-|++.|+. ||.-
T Consensus 119 ~~y~w~Gda~~~~----------~--~~~~~~~IElVTSPNNPDG~lr--~~---V~~g~~~k~I~D~AYYWPhyTpI~~ 181 (363)
T PF04864_consen 119 RLYKWAGDASNFK----------N--SDNPSPYIELVTSPNNPDGQLR--EA---VLNGSSGKVIHDLAYYWPHYTPITA 181 (363)
T ss_dssp TTEEEEEECCCGT----------T---S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S
T ss_pred cCccccccHHhhc----------c--CCCCCCeEEEEeCCCCCccccc--ch---hcCCCCcceeeeeeeecccccccCC
Confidence 1222222111111 1 0113567888999999999872 11 23445667899999998864 5543
Q ss_pred CCCCCCCCcEEEEcCCCCCCCCCC--ceEEEEeccc
Q 043646 282 RSRNIDGYDAIFLATHKFLGGPGT--PGILLISKAL 315 (625)
Q Consensus 282 ~~~~~~~~D~v~~S~hK~lggp~g--~G~l~v~~~~ 315 (625)
.. .-|++.|+.+|.=| -.| +|+.+++++.
T Consensus 182 ~a----D~DiMLFT~SK~TG-HAGSR~GWAlVKD~~ 212 (363)
T PF04864_consen 182 PA----DHDIMLFTLSKLTG-HAGSRFGWALVKDEE 212 (363)
T ss_dssp -B------SEEEEEHHHHCS--GGG-EEEEEES-HH
T ss_pred CC----CCceEEEEEecccC-ccccccceeeecCHH
Confidence 32 56999999999865 433 8999999876
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.12 E-value=0.00025 Score=70.55 Aligned_cols=252 Identities=15% Similarity=0.151 Sum_probs=152.0
Q ss_pred EEEEcCCCCchhHHHHHHcCC-eEEEEecCC--CCCCCHHHHHHHHHHhhhCCCCeEEEEecc-cCccccccC---HHHH
Q 043646 183 VVFLGPYEHHSNLLSWRQSLA-EVVEIGLDD--NGLLDIEALRSQLELYKAAKRPMLGSFSAC-SNVTGIYSD---TRSI 255 (625)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~-~vv~v~~~~--~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~-~n~TG~~~~---l~~I 255 (625)
.|+++.++|......|...|. ++...+.=. +-.+|++-+...|+.. +.-.++++.+| +||||.=.. -.+|
T Consensus 127 ~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A---Pe~si~iLhaCAhNPTGmDPT~EQW~qi 203 (410)
T KOG1412|consen 127 TVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA---PEGSIIILHACAHNPTGMDPTREQWKQI 203 (410)
T ss_pred eeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC---CCCcEEeeeccccCCCCCCCCHHHHHHH
Confidence 599999999999888998994 555555422 3478988888888742 44457777777 899997422 3568
Q ss_pred HHHHHHcCCEEEEecc-CcCCCccccCCCC-----CCCCCc-EEEEcCCCCCCCCC-CceEEE--EeccccccCCCCCcc
Q 043646 256 ARLLHQYGGFACFDFA-ASGPYVKINLRSR-----NIDGYD-AIFLATHKFLGGPG-TPGILL--ISKALYQLGSSPPST 325 (625)
Q Consensus 256 ~~la~~~g~~vivD~A-~~~g~~~id~~~~-----~~~~~D-~v~~S~hK~lggp~-g~G~l~--v~~~~~~l~~~~p~~ 325 (625)
+++.++.+.+.++|-| |++..-.++-+.| ...|.. |++-|+.|-||--. .+|.|. +++.... ...
T Consensus 204 a~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i-~~v---- 278 (410)
T KOG1412|consen 204 ADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVI-AGV---- 278 (410)
T ss_pred HHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHH-HHH----
Confidence 9999999999999988 4544445554443 112443 55569999987322 256543 3333210 000
Q ss_pred cCCceEEeeccccccccccccchhhhhcCCChhHHHH-H-H------HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCC
Q 043646 326 CGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQM-I-R------AALAFWVKEYIGYEVIKKQEDVYIESALGRILP 397 (625)
Q Consensus 326 ~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~-~-~------aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 397 (625)
..++.- ..|.....|+..+. + . +-.+.|. ..+..+..|+.+++..+++.|..
T Consensus 279 ----------------~SQl~l-viR~~~SNPPAyGArIV~kvL~tP~lre~W~---~sik~MssRI~~MR~aLrd~L~a 338 (410)
T KOG1412|consen 279 ----------------KSQLTL-VIRSNWSNPPAYGARIVHKVLSTPELREQWI---QSIKTMSSRIKKMRTALRDHLVA 338 (410)
T ss_pred ----------------HHHHHH-HHhhccCCCcchhhHHHHHHhcCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000 12222333332221 1 1 1123332 23667888999999999999977
Q ss_pred C--CcEE-EeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCCh
Q 043646 398 N--QNIQ-VLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQ 474 (625)
Q Consensus 398 l--~gv~-v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~ 474 (625)
+ ||-. -+ ..+.+.++|-- |.+.. ++.|.+.+.|.+..
T Consensus 339 L~TPGtWDHI----~~QiGMFSyTG------------------Ltp~q-V~~li~~h~vyLl~----------------- 378 (410)
T KOG1412|consen 339 LKTPGTWDHI----TQQIGMFSYTG------------------LTPAQ-VDHLIENHKVYLLS----------------- 378 (410)
T ss_pred cCCCCcHHHH----HhhccceeecC------------------CCHHH-HHHHHHhceEEEec-----------------
Confidence 6 3210 00 23567777643 33444 45566778888752
Q ss_pred hhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Q 043646 475 TRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFIAAYG 523 (625)
Q Consensus 475 ~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~~~~~ 523 (625)
.| ||++... +...+|++.++|.+.++..
T Consensus 379 ------------------~G--RInisGL-N~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 379 ------------------DG--RINISGL-NMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred ------------------CC--cEeeecc-ccccHHHHHHHHHHHHHhh
Confidence 24 6666322 4478899999998877653
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.74 E-value=0.0022 Score=69.61 Aligned_cols=296 Identities=14% Similarity=0.072 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH
Q 043646 121 KMVHEASNYIKRCLGGGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ 200 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~ 200 (625)
+-.-.....|+++.|.+-.+.-++- -||.++=..++... .....+ +++....|+-.+..++.
T Consensus 163 EsllNyQTmi~dlTGL~~aNASLLD-EgTAaaEAm~l~~~---------------~~krkk--~vvd~~~hpqtlsV~~T 224 (1001)
T KOG2040|consen 163 ESLLNYQTMITDLTGLPMANASLLD-EGTAAAEAMALCNR---------------INKRKK--FVVDSNCHPQTLSVVKT 224 (1001)
T ss_pred HHHhhhHHhhhhccCCcccchhhhc-cchhHHHHHHHHHh---------------hcccce--EEecCCCCcchhhhhhc
Confidence 3334456788999999865433443 55555332222211 223333 99999999998877654
Q ss_pred c----CCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 201 S----LAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 201 ~----G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
. |++++..+ +.+ +-.. .....-+.+..| +.-|.+.|.+++++.+|+.|.++++-.---.-.
T Consensus 225 Ra~~~~i~v~~~~--------~~~---~~~s---~~~v~gvlvQYP-~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLt 289 (1001)
T KOG2040|consen 225 RAKGFGIKVVVSD--------IKE---ADYS---SKDVSGVLVQYP-DTEGSVLDFDELVELAHANGSLVVMATDLLALT 289 (1001)
T ss_pred cccccceeEEecC--------HHH---hhcc---ccceeEEEEEcC-CCCCcccCHHHHHHHhhccCceEEEeehhhHHH
Confidence 2 33433222 221 1111 123455555554 456999999999999999998866532100001
Q ss_pred ccccCCCCCCCCCcEEEEcCCCCCCCCCC-----ceEEEEeccccccCCCCCcccCCceEEeecccccccccc-----cc
Q 043646 277 VKINLRSRNIDGYDAIFLATHKFLGGPGT-----PGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLY-----LE 346 (625)
Q Consensus 277 ~~id~~~~~~~~~D~v~~S~hK~lggp~g-----~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~-----~~ 346 (625)
+--...++ |+|+++.|.+.+ |.|.| .||+.+++++. +.++....| -+.+. .....| -+
T Consensus 290 iLrpPgef---GaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~l~--R~mPGRiiG-vtkD~-----~gk~a~RLALQTR 357 (1001)
T KOG2040|consen 290 ILRPPGEF---GADIAVGSSQRF-GVPLGYGGPHAAFFAVSESLV--RMMPGRIIG-VTKDA-----LGKEAYRLALQTR 357 (1001)
T ss_pred ccCChhhc---Cceeeecccccc-CccccCCCchHHHHHHHHHHH--hhCCCceEe-eeecc-----cccHHHHHHHHHH
Confidence 11111223 899999999886 44533 46777777763 333322222 11111 011111 12
Q ss_pred chhhhhcCCChhHHHHH--H---HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceE-EEEec
Q 043646 347 DIEERENGGTPQIVQMI--R---AALAFWVKEYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAIL-SFLVY 420 (625)
Q Consensus 347 ~~~~~~~~gt~~~~~~~--~---aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~-~f~~~ 420 (625)
...-|.+..|.|++..- . +|.-.......|.+.|..|++.++..+...|+.. |-++.... .| +.-+.
T Consensus 358 EQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~------fFDTLkI~ 430 (1001)
T KOG2040|consen 358 EQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKP------FFDTLKIR 430 (1001)
T ss_pred HHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcccc------ccceEEEE
Confidence 33445667788876541 1 1111122345678899999999999999999865 45554331 11 11111
Q ss_pred cCCCCCCccccccCCCCCChHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEec
Q 043646 421 STTNSSPENMKIERNKPLHGPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITF 500 (625)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~ 500 (625)
-+ -+.+++..+..+ .+|.+|.- .++.+-+|+
T Consensus 431 ~~---------------~s~~~~l~rA~~-~~iNlr~~---------------------------------ed~tigvsl 461 (1001)
T KOG2040|consen 431 CG---------------CSAEEVLDRAAK-RQINLRLV---------------------------------EDGTIGVSL 461 (1001)
T ss_pred ec---------------CcHHHHHHHHHh-hcCceEEe---------------------------------ecCceEEee
Confidence 11 134566666645 46777621 258899999
Q ss_pred CCCCCHHHHHHHHHHHH
Q 043646 501 PYYMSNEEFEFILAALE 517 (625)
Q Consensus 501 ~~~~t~edid~ll~aL~ 517 (625)
--..+++|+|.++..+.
T Consensus 462 DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 462 DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred cccccHHHHHHHHHHHc
Confidence 99999999999998775
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.0054 Score=62.31 Aligned_cols=213 Identities=16% Similarity=0.155 Sum_probs=121.5
Q ss_pred CHHHHHHHHHHhhhCCCC-eEEEEecccCccccc----cCHHHHHHHHHHcCCEEEEeccCcCCCc--------cccCCC
Q 043646 217 DIEALRSQLELYKAAKRP-MLGSFSACSNVTGIY----SDTRSIARLLHQYGGFACFDFAASGPYV--------KINLRS 283 (625)
Q Consensus 217 d~~~L~~~l~~~~~~~~~-~lv~~~~~~n~TG~~----~~l~~I~~la~~~g~~vivD~A~~~g~~--------~id~~~ 283 (625)
.++++++.|..+...+.| ..+++....+.-|-- .=.+.+.+++++||+.++||++|..|-. ..++..
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 467788888865443444 567777777777754 2278999999999999999999765432 233332
Q ss_pred CCCCCCcEEEEcCCCCCCCCCCceEEEEeccccccCCCCCcccCCceEEeeccccccccccccchhhhhcCCChhHHHHH
Q 043646 284 RNIDGYDAIFLATHKFLGGPGTPGILLISKALYQLGSSPPSTCGGGTVNYVNAFDEKDTLYLEDIEERENGGTPQIVQMI 363 (625)
Q Consensus 284 ~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~~~l~~~~p~~~ggg~v~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 363 (625)
.+|+++|| |=|- .+ | .+-..++ +.-.|+.. -.-..|.|.-.-++
T Consensus 334 ----PpD~vTFS--KK~q-~g--G-ffh~~~f---rpn~pYri-----------------------fNTWmGdP~k~lll 377 (484)
T KOG1405|consen 334 ----PPDVVTFS--KKFQ-TG--G-FFHDEEF---RPNEPYRI-----------------------FNTWMGDPSKNLLL 377 (484)
T ss_pred ----Cccceehh--hhhh-cC--c-cccCccc---CCCchHHH-----------------------hhhhcCChHHHHHH
Confidence 67988887 4442 11 3 2333333 11112210 00012344333333
Q ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhCCC----CcEEEeCCCCCCCcceEEEEeccCCCCCCccccccCCCCCC
Q 043646 364 RAALAFWVKEYIGYEVIKKQEDVYIESALGRILPN----QNIQVLGNTSVKRQAILSFLVYSTTNSSPENMKIERNKPLH 439 (625)
Q Consensus 364 ~aal~~~~~~~~g~~~i~~~~~~l~~~l~~~L~~l----~gv~v~~~~~~~~~~i~~f~~~~~~~~~~~~~~~~~~~~l~ 439 (625)
...+.. +-.+.+.+......+++...|.++ |+. +... ..|+..+++....+. -
T Consensus 378 ~~vv~~-----I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~--~~~~-RGrGTF~a~d~ps~~---------------~ 434 (484)
T KOG1405|consen 378 EEVVQE-----IKREDLLNNVAHVGKALLKGLLELQAKYPGK--INNL-RGRGTFIAWDCPSGS---------------I 434 (484)
T ss_pred HHHHHH-----HhHHHHHHHHHHHHHHHHHHHHHHHHhCchh--hhcc-cccceEEEEeCCChH---------------H
Confidence 333332 334556666666677777777554 321 1111 124444444443221 1
Q ss_pred hHHHHHHhhhhcCeeeecCCCCCchhhHhhhcCChhhHHHHHHHHHhCCCCCCCcEEEEecCCCCCHHHHHHHHHHHHHH
Q 043646 440 GPFVATLFNDLFGIQARGGCACAGPYGHTLLAFDQTRSLEIRSAIQKGYLGVKPGWTRITFPYYMSNEEFEFILAALEFI 519 (625)
Q Consensus 440 ~~~v~~~L~~~~gI~v~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~g~~~g~iRis~~~~~t~edid~ll~aL~~~ 519 (625)
.+.++..+ ..+|+.+ +||. ...||+-+..--++...+-+++.+.++
T Consensus 435 Rdk~i~~~-~~nGv~~-GGCg--------------------------------~~siRfRPsLvf~~~Ha~i~l~~~~k~ 480 (484)
T KOG1405|consen 435 RDKLILIA-RLNGVNL-GGCG--------------------------------DKSIRFRPSLVFRKHHADIFLDIFDKI 480 (484)
T ss_pred HHHHHHHH-HHcCcee-cccc--------------------------------cceeeeccceeehhhhHHHHHHHHHHH
Confidence 23455555 5578876 4542 356888887777889999999999988
Q ss_pred HHh
Q 043646 520 AAY 522 (625)
Q Consensus 520 ~~~ 522 (625)
++.
T Consensus 481 l~~ 483 (484)
T KOG1405|consen 481 LAG 483 (484)
T ss_pred hcc
Confidence 754
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=96.96 E-value=0.016 Score=58.83 Aligned_cols=125 Identities=15% Similarity=0.135 Sum_probs=81.3
Q ss_pred EEEEcCCCCchhHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc---cCHHHHHH
Q 043646 183 VVFLGPYEHHSNLLSWRQSLAEVVEIGLD--DNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY---SDTRSIAR 257 (625)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~---~~l~~I~~ 257 (625)
.|+++.++|......+...|+.+..+..- .+..+|.+.+.+-+.+. .+...+++=.-.+||||+= ...++|.+
T Consensus 148 ~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~--p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~ 225 (427)
T KOG1411|consen 148 DIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA--PEGSIILLHACAHNPTGVDPTKEQWEKISD 225 (427)
T ss_pred ceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC--CCCcEEEeehhhcCCCCCCccHHHHHHHHH
Confidence 49999999988888888899988776542 25678888777666631 1223333334457999974 23577899
Q ss_pred HHHHcCCEEEEecc-CcCCCccccCCCC-----CCCCCcE-EEEcCCCCCCCCCC-ceEE
Q 043646 258 LLHQYGGFACFDFA-ASGPYVKINLRSR-----NIDGYDA-IFLATHKFLGGPGT-PGIL 309 (625)
Q Consensus 258 la~~~g~~vivD~A-~~~g~~~id~~~~-----~~~~~D~-v~~S~hK~lggp~g-~G~l 309 (625)
+.++.+.+-++|-| |++..-.+|-+.. ..+|.++ ++-|+.|.+|--+. +|.+
T Consensus 226 ~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 226 LIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred HhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhcccee
Confidence 99999999999998 3333333333221 1124444 45589999874332 5655
No 395
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=95.79 E-value=0.2 Score=53.24 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=88.6
Q ss_pred eEEEEcCCCCchhH-HHHHHcCCeEEEEe--cC--C---CCCCCHHHHHHHHHHhhhCCC-CeEEEEecccCccccccCH
Q 043646 182 WVVFLGPYEHHSNL-LSWRQSLAEVVEIG--LD--D---NGLLDIEALRSQLELYKAAKR-PMLGSFSACSNVTGIYSDT 252 (625)
Q Consensus 182 ~~Vlv~~~~h~s~~-~~~~~~G~~vv~v~--~~--~---~~~ld~~~L~~~l~~~~~~~~-~~lv~~~~~~n~TG~~~~l 252 (625)
+++++++..|.-.. ..+++.|+..+.|. ++ . .|++|...+++.|+++...++ |-+++-.-..+..|..+-+
T Consensus 232 Pt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi 311 (838)
T KOG0630|consen 232 PTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMI 311 (838)
T ss_pred ceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHH
Confidence 57899988887664 34677887443332 22 2 358999999999998766554 5566666677788999999
Q ss_pred HHHHHHHHHcC-CEEEEeccCcCCCc---cccCCCCCCCCCcEEEEcCCCCCCCCCCceEEEEeccc
Q 043646 253 RSIARLLHQYG-GFACFDFAASGPYV---KINLRSRNIDGYDAIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 253 ~~I~~la~~~g-~~vivD~A~~~g~~---~id~~~~~~~~~D~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
-.|.++|++|+ .|++.-+-.-.... |-+......+..|.+.....-|+|.|.. -+++..+.+
T Consensus 312 ~kildi~eahakfWLHasGhaiAALt~aepnnil~HV~eqldSMal~ialWLGiPSa-PiV~LHRPl 377 (838)
T KOG0630|consen 312 LKILDICEAHAKFWLHASGHAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSA-PIVLLHRPL 377 (838)
T ss_pred HHHHHHHHHhhheeEeeccchhhheeecCcccchhHHHHHHhhccchhHHHhCCCCC-ceEEeeccc
Confidence 99999999987 88887753111111 1111110112568889998999998874 344444443
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=95.73 E-value=0.046 Score=50.44 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHhC----CCCCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCc
Q 043646 119 MTKMVHEASNYIKRCLG----GGQADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH 192 (625)
Q Consensus 119 ~~~~~~~~~~~ia~~~g----~~~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~ 192 (625)
..++.+.+.+++.+.+| .+++ +|++| +|++.++..++.++ ++|||. |+++.+.|+
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~pd-~Ivvt-~Ga~~al~~l~~~l---------------~dpGD~--VlVp~P~Y~ 152 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDAD-MIVLS-AGATAANEIIMFCI---------------ADPGDA--FLVPTPYYA 152 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccchh-heEEc-CCHHHHHHHHHHHH---------------cCCCCE--EEEeCCCCC
Confidence 45677788888888877 3444 89998 89999999998888 589996 888887775
No 397
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=94.90 E-value=0.11 Score=51.05 Aligned_cols=127 Identities=13% Similarity=0.048 Sum_probs=82.9
Q ss_pred CCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecC--CC-CCCCHHHHHHHHHHhhhCCCCe-EEEEecccC--cccccc
Q 043646 177 RDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLD--DN-GLLDIEALRSQLELYKAAKRPM-LGSFSACSN--VTGIYS 250 (625)
Q Consensus 177 ~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~--~~-~~ld~~~L~~~l~~~~~~~~~~-lv~~~~~~n--~TG~~~ 250 (625)
+|.-+ .|+-.....-|..+++...|.+++.|.-- .+ -..|++.+++.+++- .+. ++++....+ ..-.-+
T Consensus 100 rpkak-yiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~----g~dcilci~sttscfapr~pd 174 (432)
T KOG3843|consen 100 RPKAK-YIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEEL----GEDCILCIHSTTSCFAPRSPD 174 (432)
T ss_pred CCccc-EEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHh----CCceEEEEeecccccCCCCCc
Confidence 34444 46666777777778888889988777532 22 257888998888752 233 333322111 112225
Q ss_pred CHHHHHHHHHHcCCEEEEeccCcCCCccccCCC----CCCCCCcEEEEcCCCCCCCCCCceEEE
Q 043646 251 DTRSIARLLHQYGGFACFDFAASGPYVKINLRS----RNIDGYDAIFLATHKFLGGPGTPGILL 310 (625)
Q Consensus 251 ~l~~I~~la~~~g~~vivD~A~~~g~~~id~~~----~~~~~~D~v~~S~hK~lggp~g~G~l~ 310 (625)
.+++|+.+|..|+++-+|..|+++-.... ++. .....+|.++-|.-|.|..|-| |.++
T Consensus 175 ~leaiaaica~~diphivnnayglqsee~-i~~iaa~~~~grida~vqsldknf~vpvg-gaii 236 (432)
T KOG3843|consen 175 NLEAIAAICAAHDIPHIVNNAYGLQSEEC-IHKIAAAAECGRIDAFVQSLDKNFMVPVG-GAII 236 (432)
T ss_pred hHHHHHHHHHccCchhhhccccccchHHH-HHHHHHHhhhccHHHHHHHhhhcceeecc-hhHh
Confidence 59999999999999999999877643221 111 1224689999999999999987 4444
No 398
>PF03476 MOSC_N: MOSC N-terminal beta barrel domain; InterPro: IPR005303 This domain is found to the N terminus of MOSC domain (IPR005302 from INTERPRO). The function of this domain is unknown, however it is predicted to adopt a beta barrel fold.; PDB: 2EXN_A.
Probab=71.45 E-value=1.3 Score=38.98 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=3.7
Q ss_pred cccCcccccccc------cccccccchh-hhhhhhcc
Q 043646 526 FLPLYHFNVKAG------NWCSSQKAIK-DLIDKETN 555 (625)
Q Consensus 526 ~~~~y~~~~~~~------~w~~~~~~~~-~~~~~~~~ 555 (625)
...||.||+||| +|.+...|++ +| |+||
T Consensus 4 v~~L~iyPIKS~~g~~~~~~~~~~~Gl~~~D--R~~~ 38 (120)
T PF03476_consen 4 VSSLYIYPIKSCRGIEVDEAEVTPSGLKAGD--RRFM 38 (120)
T ss_dssp ----------------------------GT----SEE
T ss_pred ccccccccccccccccccccccccccCCccc--hhhe
Confidence 345899999999 9999999998 99 9998
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=55.20 E-value=50 Score=32.20 Aligned_cols=70 Identities=17% Similarity=0.014 Sum_probs=39.8
Q ss_pred EEEcCCCCchhHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC
Q 043646 184 VFLGPYEHHSNLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG 263 (625)
Q Consensus 184 Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g 263 (625)
.++...........++..|++++..+.+ |.+.|.++++ + ...|++..+.+......-...|++.|++.|
T Consensus 26 ~~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~-----g-~d~v~~~~~~~~~~~~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 26 RALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALK-----G-VDAVFSVTPPSHPSELEQQKNLIDAAKAAG 94 (233)
T ss_dssp EEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT-----T-CSEEEEESSCSCCCHHHHHHHHHHHHHHHT
T ss_pred EEEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHc-----C-CceEEeecCcchhhhhhhhhhHHHhhhccc
Confidence 3334434333345577789998766554 8899999998 3 333334333332233333567888888877
Q ss_pred C
Q 043646 264 G 264 (625)
Q Consensus 264 ~ 264 (625)
+
T Consensus 95 V 95 (233)
T PF05368_consen 95 V 95 (233)
T ss_dssp -
T ss_pred c
Confidence 5
No 400
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=49.05 E-value=1.3e+02 Score=28.37 Aligned_cols=45 Identities=20% Similarity=0.196 Sum_probs=29.3
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCH--HHHHHHHHHcC
Q 043646 215 LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDT--RSIARLLHQYG 263 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l--~~I~~la~~~g 263 (625)
.+|.+++++++.+-.. .....|+++..+ ....|- .++.+++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~-~gv~avAV~~~f---S~~np~hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKD-KGVEAVAVSLLF---SYRNPEHEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHh-CCCCEEEEECcc---CCCCHHHHHHHHHHHHhcC
Confidence 5788999988875322 346777777655 334554 34677877765
No 401
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=48.79 E-value=3.2e+02 Score=28.14 Aligned_cols=121 Identities=13% Similarity=0.021 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHhCCC-CCCcEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEc--CCCCchh--
Q 043646 120 TKMVHEASNYIKRCLGGG-QADAIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLG--PYEHHSN-- 194 (625)
Q Consensus 120 ~~~~~~~~~~ia~~~g~~-~~~~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~--~~~h~s~-- 194 (625)
.+..+.+.+.+++.--.. .+..++.|-+.+.+.+..+..+. +.+.+..|++. .+.+.+.
T Consensus 99 i~~~~~a~~~ia~~~a~~i~dg~~IlTh~~S~~v~~~l~~A~----------------~~~k~~~V~VtESRP~~eG~~~ 162 (301)
T COG1184 99 IDRVEKAKERIAEIGAERIHDGDVILTHSFSKTVLEVLKTAA----------------DRGKRFKVIVTESRPRGEGRIM 162 (301)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCEEEEecCcHHHHHHHHHhh----------------hcCCceEEEEEcCCCcchHHHH
Confidence 344445555554432111 12267888566666666655544 34443335553 3344333
Q ss_pred HHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccC---HHHHHHHHHHcCCEEEEe
Q 043646 195 LLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSD---TRSIARLLHQYGGFACFD 269 (625)
Q Consensus 195 ~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~---l~~I~~la~~~g~~vivD 269 (625)
...+++.|.++..|+- .+....+.+ -.++++-...-...|.+.. .-.|+..||+++.++++=
T Consensus 163 ak~L~~~gI~~~~I~D--------sa~~~~~~~-----vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 163 AKELRQSGIPVTVIVD--------SAVGAFMSR-----VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred HHHHHHcCCceEEEec--------hHHHHHHHh-----CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 2446678988887762 123333331 2344444444445565533 577899999999887654
No 402
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=47.79 E-value=1.2e+02 Score=33.82 Aligned_cols=87 Identities=15% Similarity=0.018 Sum_probs=57.9
Q ss_pred HHHcC-CeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCcC
Q 043646 198 WRQSL-AEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAASG 274 (625)
Q Consensus 198 ~~~~G-~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~~ 274 (625)
++..| .+|..++... ..++.+++.+.|.+ .+|.+|.++. .|.......++++.+++. ++.+++=+.|+.
T Consensus 32 L~~~G~~~V~iiD~~~-~~~~~~~~~~~l~~----~~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT-GPLTDEKLVERLRA----HCPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred HHhcCCcceEEecccc-cCCCHHHHHHHHHh----cCcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 45678 6888887543 34677888888875 5789998874 345566677899999886 999999888754
Q ss_pred CCccccCCCCCCCCCcEEEE
Q 043646 275 PYVKINLRSRNIDGYDAIFL 294 (625)
Q Consensus 275 g~~~id~~~~~~~~~D~v~~ 294 (625)
..-.--+... ..+|+++.
T Consensus 104 ~~~~~~l~~~--p~vD~Vv~ 121 (497)
T TIGR02026 104 FMFHQVLTEA--PWIDFIVR 121 (497)
T ss_pred cCHHHHHhcC--CCccEEEe
Confidence 3211111111 25788775
No 403
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=46.37 E-value=3.2e+02 Score=27.39 Aligned_cols=62 Identities=11% Similarity=-0.015 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEeccc----CccccccCHHHHHHHHHHcCCEEEEeccCcCCC
Q 043646 215 LLDIEALRSQLELYKAAKRPMLGSFSACS----NVTGIYSDTRSIARLLHQYGGFACFDFAASGPY 276 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~~~~~~lv~~~~~~----n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~ 276 (625)
..+++++..+++.-...+...++++.-+. +++-...++..|..+.+..++.|++|..|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 56788887777642223444554443132 222225678888888887999999999999875
No 404
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=43.69 E-value=4.2e+02 Score=28.02 Aligned_cols=63 Identities=16% Similarity=-0.035 Sum_probs=41.6
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEecc-----c-CccccccCHHHHHHHHHHcCCEEEEeccCcCCCcc
Q 043646 215 LLDIEALRSQLELYKAAKRPMLGSFSAC-----S-NVTGIYSDTRSIARLLHQYGGFACFDFAASGPYVK 278 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~~~~~~lv~~~~~-----~-n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g~~~ 278 (625)
..+++++..+++.-...++..+ +++++ . ..+=...|+..|..+-+..++.+|+|.+|+.|...
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~v-iL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd 286 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPNV-ILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSE 286 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCeE-EEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHH
Confidence 3478887777663222234444 44444 2 22234578999998877779999999999998643
No 405
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=42.20 E-value=1.6e+02 Score=26.45 Aligned_cols=64 Identities=11% Similarity=-0.043 Sum_probs=44.9
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC---CEEEEecc
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG---GFACFDFA 271 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g---~~vivD~A 271 (625)
++..|.+|+....+ ..++.+-++..+ .++.+|.+|+-. |.....++++.+.+++.| ..+++=++
T Consensus 25 l~~~GfeVi~LG~~----v~~e~~v~aa~~----~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl~~~~vivGG~ 91 (134)
T TIGR01501 25 FTNAGFNVVNLGVL----SPQEEFIKAAIE----TKADAILVSSLY--GHGEIDCKGLRQKCDEAGLEGILLYVGGN 91 (134)
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccc--ccCHHHHHHHHHHHHHCCCCCCEEEecCC
Confidence 46679999888765 467777776664 578888888765 344456888999999875 44545444
No 406
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=41.88 E-value=2.2e+02 Score=24.25 Aligned_cols=66 Identities=18% Similarity=0.162 Sum_probs=48.2
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc--CCEEEEeccCc
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY--GGFACFDFAAS 273 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~--g~~vivD~A~~ 273 (625)
++..|.++..++.+ .+.+++.+.+.+ .++.+|.++.. .+.......++++..++. ++.+++=+.+.
T Consensus 24 l~~~G~~v~~~d~~----~~~~~l~~~~~~----~~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 24 LRKAGHEVDILDAN----VPPEELVEALRA----ERPDVVGISVS--MTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHHTTBEEEEEESS----B-HHHHHHHHHH----TTCSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred HHHCCCeEEEECCC----CCHHHHHHHHhc----CCCcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 45579999988765 356888887775 57888888753 344556678888888876 78999888764
No 407
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=40.04 E-value=1.1e+02 Score=31.71 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc----CCEEEEeccCcCCCccccCCCCCCCCCc
Q 043646 215 LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY----GGFACFDFAASGPYVKINLRSRNIDGYD 290 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~----g~~vivD~A~~~g~~~id~~~~~~~~~D 290 (625)
.++.+.+++.|+.-...++.+.|++- .++|-|.+..-+.|++..+++ -+++.++..++.|..-+.+ .+|
T Consensus 79 ~~~~~~~~~~l~~~~~~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY~IA~------aAd 151 (317)
T COG0616 79 FIGGDDIEEILRAARADPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGYYIAL------AAD 151 (317)
T ss_pred cccHHHHHHHHHHHhcCCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhhhhhc------cCC
Confidence 34677777776643333566766665 678899998888887777653 2677777654433333333 568
Q ss_pred EEEEcCCCCCCCCCCceEEEEeccc
Q 043646 291 AIFLATHKFLGGPGTPGILLISKAL 315 (625)
Q Consensus 291 ~v~~S~hK~lggp~g~G~l~v~~~~ 315 (625)
-++.+++=..| .+|++.....+
T Consensus 152 ~I~a~p~si~G---SIGVi~~~~~~ 173 (317)
T COG0616 152 KIVADPSSITG---SIGVISGAPNF 173 (317)
T ss_pred EEEecCCceee---eceeEEecCCH
Confidence 88888888765 35777765554
No 408
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.03 E-value=1.7e+02 Score=24.32 Aligned_cols=66 Identities=9% Similarity=0.027 Sum_probs=39.1
Q ss_pred chhHHHHHHcCCeEEEEecCCCCCCCH--HHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEE
Q 043646 192 HSNLLSWRQSLAEVVEIGLDDNGLLDI--EALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (625)
Q Consensus 192 ~s~~~~~~~~G~~vv~v~~~~~~~ld~--~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~viv 268 (625)
..+...+...|++.+.. ..++.... ..|+..+. ++.+|++..-...- .-...+-+.|+++|++++.
T Consensus 13 ~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~------~aD~VIv~t~~vsH---~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIK------KADLVIVFTDYVSH---NAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred HHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcC------CCCEEEEEeCCcCh---HHHHHHHHHHHHcCCcEEE
Confidence 34445567789998888 22222222 24777765 45555554322221 2267788899999987764
No 409
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=36.34 E-value=71 Score=29.83 Aligned_cols=51 Identities=22% Similarity=0.199 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC--CEEEEeccCcCCCc
Q 043646 217 DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG--GFACFDFAASGPYV 277 (625)
Q Consensus 217 d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g--~~vivD~A~~~g~~ 277 (625)
|..+++++++. ....+++- +|.+..++++.+.++++| +++|+|-..+....
T Consensus 12 ~~~~le~~les-----~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~~ 64 (181)
T COG1954 12 DNKDLEKALES-----ESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSND 64 (181)
T ss_pred hHHHHHHHhcC-----CCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccCCc
Confidence 56778888873 45544442 477899999999999986 78999988776543
No 410
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=35.95 E-value=2.8e+02 Score=23.74 Aligned_cols=84 Identities=17% Similarity=0.050 Sum_probs=51.7
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc---CCEEEEeccCcC
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY---GGFACFDFAASG 274 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~---g~~vivD~A~~~ 274 (625)
++..|.+|+.... .+.++.+.+.+.+ .++.+|.++.. .+.....+.++.+.+++. ++.+++=+.+..
T Consensus 23 l~~~G~~V~~lg~----~~~~~~l~~~~~~----~~pdvV~iS~~--~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~ 92 (119)
T cd02067 23 LRDAGFEVIDLGV----DVPPEEIVEAAKE----EDADAIGLSGL--LTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVT 92 (119)
T ss_pred HHHCCCEEEECCC----CCCHHHHHHHHHH----cCCCEEEEecc--ccccHHHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 4557999866553 3567888777765 57888888754 233446678888888876 466666665433
Q ss_pred CCccccCCCCCCCCCcEEEEc
Q 043646 275 PYVKINLRSRNIDGYDAIFLA 295 (625)
Q Consensus 275 g~~~id~~~~~~~~~D~v~~S 295 (625)
.. +-.++.. |+|.++.+
T Consensus 93 ~~-~~~~~~~---G~D~~~~~ 109 (119)
T cd02067 93 RD-FKFLKEI---GVDAYFGP 109 (119)
T ss_pred hh-HHHHHHc---CCeEEECC
Confidence 21 1112222 67776653
No 411
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=35.93 E-value=1.8e+02 Score=29.14 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=42.7
Q ss_pred EecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccc---ccCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 208 IGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGI---YSDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 208 v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~---~~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
|-+.....+.++++..+++.-...++..++...=..+. |. +.|+..|.-+ ++.+.+||+|.+|++
T Consensus 119 V~lKrG~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf-~y~r~~~D~~~ip~~-k~~~~PVi~DpSHsv 186 (258)
T TIGR01362 119 VNVKKGQFLSPWDMKNVVEKVLSTGNKNILLCERGTSF-GYNNLVVDMRSLPIM-RELGCPVIFDATHSV 186 (258)
T ss_pred EEecCCCcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCc-CCCCcccchhhhHHH-HhcCCCEEEeCCccc
Confidence 33334445677776665553233356777777666644 55 5788888765 445899999999984
No 412
>smart00642 Aamy Alpha-amylase domain.
Probab=35.66 E-value=32 Score=32.12 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=27.6
Q ss_pred EecccCccccccCHHHHHHHHHHcCCEEEEecc
Q 043646 239 FSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 239 ~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A 271 (625)
+..++...|...+++++++.||++|+-|++|.+
T Consensus 59 ~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 59 YKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred cCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 333444568889999999999999999999987
No 413
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=34.85 E-value=3.2e+02 Score=24.31 Aligned_cols=67 Identities=10% Similarity=-0.082 Sum_probs=46.4
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC---CEEEEeccCcC
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG---GFACFDFAASG 274 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g---~~vivD~A~~~ 274 (625)
++..|.+|+....+ ..++.+.++..+ .++.+|.+|+.. |.....++++.+.+++.| +.+++=++-..
T Consensus 23 L~~~GfeVidLG~~----v~~e~~v~aa~~----~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i 92 (128)
T cd02072 23 FTEAGFNVVNLGVL----SPQEEFIDAAIE----TDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGGNLVV 92 (128)
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEECCCCC
Confidence 45679999887765 467777666654 578888887653 344556788889898874 56776666443
No 414
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=33.07 E-value=3.4e+02 Score=26.07 Aligned_cols=30 Identities=13% Similarity=-0.057 Sum_probs=23.2
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEE
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACF 268 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~viv 268 (625)
-+++++. +|.-.++-.+++++|++|+.++.
T Consensus 112 vli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 112 VLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred EEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 4555543 57778899999999999998775
No 415
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=32.79 E-value=3.6e+02 Score=29.43 Aligned_cols=51 Identities=18% Similarity=0.176 Sum_probs=35.9
Q ss_pred EEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 142 IIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 142 vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
|+-.++|.++ ++..++..+|+ +.+|+++...-..-...++..|++|+.++-
T Consensus 155 Vv~aSsGN~G~slA~~Aa~lG~------------------~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~ 206 (431)
T TIGR02035 155 IAVGSTGNLGLSIGIISAALGF------------------QVTVHMSADAKQWKKDKLRSKGVTVVEYES 206 (431)
T ss_pred EEEECccHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 4444456555 77777776653 235888877766677788999999999874
No 416
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=32.70 E-value=34 Score=34.71 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=31.5
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEecc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A 271 (625)
...-+..+...-|...+++++++.||++|+-|++|.+
T Consensus 37 ~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 37 DPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp SESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cceeeeccccccchhhhhhhhhhccccccceEEEeee
Confidence 3444555677789999999999999999999999987
No 417
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=32.14 E-value=2.8e+02 Score=28.31 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=36.2
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|..+ ++..+++.+|+ +..|+++...-......++..|++|+.++-
T Consensus 61 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 61 VLIEATSGNTGIALAMIAALKGY------------------RMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred EEEEECCChHHHHHHHHHHHcCC------------------eEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 46655556555 66666666652 235777776666777778889999999874
No 418
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=31.98 E-value=23 Score=39.65 Aligned_cols=168 Identities=15% Similarity=-0.031 Sum_probs=105.1
Q ss_pred HHHHHHHHhCCCCCC-cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHH----
Q 043646 126 ASNYIKRCLGGGQAD-AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQ---- 200 (625)
Q Consensus 126 ~~~~ia~~~g~~~~~-~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~---- 200 (625)
++..+-.+++.+.++ .+++| ..-.++..+.++... +.-.+ .++.-..|++-...|..
T Consensus 181 ik~ri~d~L~ipe~~y~lldt-aSrvSaf~Ldaesy~----------------f~~~~-~lltiFgyetgAvlv~~r~A~ 242 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDT-ASRVSAFPLDAESYP----------------FDFNP-KLLTIFGYETGAVLVMNRSAE 242 (728)
T ss_pred eeeeeecccccCCceEEEEEe-ecccccccchHhhCC----------------Ccccc-hheeecCCCchhhHHHhhhhH
Confidence 566666777777665 56777 445556666666542 22222 46677777774333433
Q ss_pred -cCCeEEEEecCC-CCCCCHHHHHHHHHHhhhCCC---CeEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 201 -SLAEVVEIGLDD-NGLLDIEALRSQLELYKAAKR---PMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 201 -~G~~vv~v~~~~-~~~ld~~~L~~~l~~~~~~~~---~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
.|+++.-.-... ...+.-+.|++.+.+.+.... .-+.+|...+-.||....+... .++.+.++.+.+|.-+.
T Consensus 243 ~~Ggkt~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wm-t~al~~~whvlLda~~l-- 319 (728)
T KOG2142|consen 243 LKGGKTASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWM-TLALANNWHVLLDALAL-- 319 (728)
T ss_pred hhcCccceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHH-HHHHhhhHHHHHhhhcc--
Confidence 355443322221 223444567777764211111 2377889999999999999887 45667788899997655
Q ss_pred CccccCCCCC--CCCCcEEEEcCCCCCCCC--CCceEEEEeccc
Q 043646 276 YVKINLRSRN--IDGYDAIFLATHKFLGGP--GTPGILLISKAL 315 (625)
Q Consensus 276 ~~~id~~~~~--~~~~D~v~~S~hK~lggp--~g~G~l~v~~~~ 315 (625)
-+.+|+.++ .-.+|+...++++-||-+ .|.|++.+++..
T Consensus 320 -G~kdmd~yglS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~ 362 (728)
T KOG2142|consen 320 -GPKDMDSYGLSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSA 362 (728)
T ss_pred -CcchHhhhhhhccCccceeeeEEEEeccCCCCceeeeeeehhh
Confidence 244555442 124899999999999765 568999998876
No 419
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=31.24 E-value=2.6e+02 Score=28.78 Aligned_cols=58 Identities=17% Similarity=0.143 Sum_probs=37.4
Q ss_pred CCCCcEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecCC
Q 043646 137 GQADAIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLDD 212 (625)
Q Consensus 137 ~~~~~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~~ 212 (625)
.+...|+=..||.|. +|..++.++|. +.++++++..-.-....++.+|++++.+|..+
T Consensus 60 ~pG~tIVE~TSGNTGI~LA~vaa~~Gy------------------~~iivmP~~~S~er~~~l~a~GAevi~t~~~~ 118 (300)
T COG0031 60 KPGGTIVEATSGNTGIALAMVAAAKGY------------------RLIIVMPETMSQERRKLLRALGAEVILTPGAP 118 (300)
T ss_pred CCCCEEEEcCCChHHHHHHHHHHHcCC------------------cEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCC
Confidence 344467766678887 77777777652 32455554443444456788999999998733
No 420
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.96 E-value=41 Score=38.21 Aligned_cols=39 Identities=18% Similarity=0.160 Sum_probs=33.5
Q ss_pred eEEEEecccCccccccCHHHHHHHHHHcCCEEEEeccCc
Q 043646 235 MLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAAS 273 (625)
Q Consensus 235 ~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~~ 273 (625)
-.+.+=+|++.-|...+++++++.||++||-||+|-+.+
T Consensus 199 q~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 199 QGTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred CcceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 345556788999999999999999999999999998733
No 421
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.36 E-value=6.6e+02 Score=27.38 Aligned_cols=128 Identities=14% Similarity=0.192 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHhCCC---------CCCcEEEeC---ChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCC
Q 043646 122 MVHEASNYIKRCLGGG---------QADAIIFCG---AGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPY 189 (625)
Q Consensus 122 ~~~~~~~~ia~~~g~~---------~~~~vift~---sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~ 189 (625)
+..-+.+.+-+++|.. ++..|+++| +|=|.....++..+- +.+-++.++..+.
T Consensus 74 ~iKiV~eELv~llG~~~~~~~l~~~~P~vImmvGLQGsGKTTt~~KLA~~lk---------------k~~~kvllVaaD~ 138 (451)
T COG0541 74 FIKIVYEELVKLLGGENSELNLAKKPPTVILMVGLQGSGKTTTAGKLAKYLK---------------KKGKKVLLVAADT 138 (451)
T ss_pred HHHHHHHHHHHHhCCCCcccccCCCCCeEEEEEeccCCChHhHHHHHHHHHH---------------HcCCceEEEeccc
Confidence 4445666677777741 222345543 566665666665551 2445545666666
Q ss_pred CCchhHHHHHHcC--CeEEEEecCCCCCCCHHHH-HHHHHHhhhCCCCeEEEEecccCccccc-------cCHHHHHHHH
Q 043646 190 EHHSNLLSWRQSL--AEVVEIGLDDNGLLDIEAL-RSQLELYKAAKRPMLGSFSACSNVTGIY-------SDTRSIARLL 259 (625)
Q Consensus 190 ~h~s~~~~~~~~G--~~vv~v~~~~~~~ld~~~L-~~~l~~~~~~~~~~lv~~~~~~n~TG~~-------~~l~~I~~la 259 (625)
.-++-+..++..+ +.|.+++.+ ..-|+.++ ++++..... ....+|++... |.. ..+.+|.+++
T Consensus 139 ~RpAA~eQL~~La~q~~v~~f~~~--~~~~Pv~Iak~al~~ak~-~~~DvvIvDTA----GRl~ide~Lm~El~~Ik~~~ 211 (451)
T COG0541 139 YRPAAIEQLKQLAEQVGVPFFGSG--TEKDPVEIAKAALEKAKE-EGYDVVIVDTA----GRLHIDEELMDELKEIKEVI 211 (451)
T ss_pred CChHHHHHHHHHHHHcCCceecCC--CCCCHHHHHHHHHHHHHH-cCCCEEEEeCC----CcccccHHHHHHHHHHHhhc
Confidence 6677777776653 344455542 22345443 455543211 34456666654 544 2345555566
Q ss_pred HHcCCEEEEecc
Q 043646 260 HQYGGFACFDFA 271 (625)
Q Consensus 260 ~~~g~~vivD~A 271 (625)
+-+.+++++|+.
T Consensus 212 ~P~E~llVvDam 223 (451)
T COG0541 212 NPDETLLVVDAM 223 (451)
T ss_pred CCCeEEEEEecc
Confidence 667899999987
No 422
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=30.31 E-value=4e+02 Score=23.84 Aligned_cols=65 Identities=11% Similarity=-0.085 Sum_probs=45.4
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc---CCEEEEeccC
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY---GGFACFDFAA 272 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~---g~~vivD~A~ 272 (625)
++..|.+|+.+..+ +.++++.+++.+ .++.+|.++...+ .....++++.+.+++. ++.+++=++-
T Consensus 27 lr~~G~eVi~LG~~----vp~e~i~~~a~~----~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~~~~~~~i~vGG~~ 94 (137)
T PRK02261 27 LTEAGFEVINLGVM----TSQEEFIDAAIE----TDADAILVSSLYG--HGEIDCRGLREKCIEAGLGDILLYVGGNL 94 (137)
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEcCccc--cCHHHHHHHHHHHHhcCCCCCeEEEECCC
Confidence 45679999988754 567888887775 5788888876554 3334567777777776 5666666653
No 423
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=30.12 E-value=6.9e+02 Score=26.51 Aligned_cols=60 Identities=12% Similarity=-0.072 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHhhhCCCCeEEEEecccC--cc-cc-ccCHHHHHHHHHHcCCEEEEeccCcCC
Q 043646 216 LDIEALRSQLELYKAAKRPMLGSFSACSN--VT-GI-YSDTRSIARLLHQYGGFACFDFAASGP 275 (625)
Q Consensus 216 ld~~~L~~~l~~~~~~~~~~lv~~~~~~n--~T-G~-~~~l~~I~~la~~~g~~vivD~A~~~g 275 (625)
.+++++..+++.-...+...++++..+.+ |+ |. -.++..|..+-+.+++.|++|..|+.|
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 57888888776432234456555542433 21 22 268999998888899999999999987
No 424
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=29.85 E-value=5.4e+02 Score=26.59 Aligned_cols=52 Identities=15% Similarity=0.184 Sum_probs=32.7
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|..+ ++..++..+|+ +.+|+++...-......++..|++|+.++-
T Consensus 53 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 53 HVVCSSGGNAGLAAAYAARKLGV------------------PCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred eEEEeCCcHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 45544455554 56666555542 235777765555556677889999998863
No 425
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=29.74 E-value=5.3e+02 Score=27.85 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=36.0
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|.++ ++...+..+|+ +..|+++...-..-...++..|++|+.++-
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~------------------~~~IvvP~~~~~~K~~~ira~GAeVv~v~~ 188 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGF------------------KVTVHMSADAKQWKKDKLRSKGVTVVEYET 188 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCC------------------CEEEEECCCCcHHHHHHHHHCCCEEEEECC
Confidence 35544456555 77777776653 235888777666677788999999999873
No 426
>KOG3055 consensus Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism]
Probab=29.55 E-value=5e+02 Score=24.72 Aligned_cols=66 Identities=24% Similarity=0.315 Sum_probs=35.2
Q ss_pred cEEEeCChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEe--cCCCCCCCH
Q 043646 141 AIIFCGAGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIG--LDDNGLLDI 218 (625)
Q Consensus 141 ~vift~sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~--~~~~~~ld~ 218 (625)
+|+..|..+.++-...+... ||. .=+...-..++...|.+-|+.-+.|. +-.+|.+|+
T Consensus 62 HVImLGPn~~~AA~~ALh~~-----------------Pg~---LQvGGGIN~~Nc~~wl~egASkVIVTSwlF~~g~fdL 121 (263)
T KOG3055|consen 62 HVIMLGPNSQAAAIGALHAY-----------------PGG---LQVGGGINSENCMSWLEEGASKVIVTSWLFNNGKFDL 121 (263)
T ss_pred eEEEECCCcHHHHHHHHHhC-----------------CCc---eeecCccChHHHHHHHHhcCceEEEEEEeccCCcccH
Confidence 67776777776555444433 332 33333334455556666676433332 123667777
Q ss_pred HHHHHHHH
Q 043646 219 EALRSQLE 226 (625)
Q Consensus 219 ~~L~~~l~ 226 (625)
+.|++...
T Consensus 122 ~RLk~i~s 129 (263)
T KOG3055|consen 122 ERLKDIVS 129 (263)
T ss_pred HHHHHHHH
Confidence 77766543
No 427
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=29.31 E-value=4e+02 Score=25.48 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=50.3
Q ss_pred EcCCCCchhHH-----HHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHH
Q 043646 186 LGPYEHHSNLL-----SWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLH 260 (625)
Q Consensus 186 v~~~~h~s~~~-----~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~ 260 (625)
+.+.+.|..-. .++..|.+|+.+..+ +.++++.+++.+ .++.+|.++...+. ....++++.+.++
T Consensus 89 ~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~----~p~~~l~~~~~~----~~~d~v~lS~~~~~--~~~~~~~~i~~lr 158 (201)
T cd02070 89 TVEGDIHDIGKNLVATMLEANGFEVIDLGRD----VPPEEFVEAVKE----HKPDILGLSALMTT--TMGGMKEVIEALK 158 (201)
T ss_pred ecCCccchHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEeccccc--cHHHHHHHHHHHH
Confidence 34445555422 245679999777643 578888888875 57888888865433 3556788888887
Q ss_pred Hc----CCEEEEecc
Q 043646 261 QY----GGFACFDFA 271 (625)
Q Consensus 261 ~~----g~~vivD~A 271 (625)
+. ++.+++=+.
T Consensus 159 ~~~~~~~~~i~vGG~ 173 (201)
T cd02070 159 EAGLRDKVKVMVGGA 173 (201)
T ss_pred HCCCCcCCeEEEECC
Confidence 75 456776665
No 428
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=28.57 E-value=6.5e+02 Score=25.71 Aligned_cols=66 Identities=15% Similarity=0.135 Sum_probs=43.9
Q ss_pred EEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccc---cCHHHHHHHHHHcCCEEEEeccCcC
Q 043646 207 EIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIY---SDTRSIARLLHQYGGFACFDFAASG 274 (625)
Q Consensus 207 ~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~---~~l~~I~~la~~~g~~vivD~A~~~ 274 (625)
.|-+......+++++..+++.-...++.++++..=..+. |.- .|+..|.-+ ++.+.+||+|.+|++
T Consensus 132 pV~lKkGq~~t~~e~~~aaeki~~~GN~~viLcERG~tF-gy~~lv~D~r~ip~m-k~~~lPVI~DpSHsv 200 (290)
T PLN03033 132 IINIKKGQFCAPSVMRNSAEKVRLAGNPNVMVCERGTMF-GYNDLIVDPRNLEWM-REANCPVVADITHSL 200 (290)
T ss_pred eEEeCCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCc-CCCCcccchhhhHHH-HhcCCCEEEeCCccc
Confidence 333444456788887776654333356677766666533 544 688888655 468999999999984
No 429
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=28.43 E-value=4.4e+02 Score=26.72 Aligned_cols=29 Identities=14% Similarity=-0.002 Sum_probs=23.3
Q ss_pred EEEEcCCCCchhHHHHHHcCCeEEEEecC
Q 043646 183 VVFLGPYEHHSNLLSWRQSLAEVVEIGLD 211 (625)
Q Consensus 183 ~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~ 211 (625)
+|+++...-......++..|++|+.++-+
T Consensus 80 ~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 80 IIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred EEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 58888776677777888899999988854
No 430
>KOG2004 consensus Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification, protein turnover, chaperones]
Probab=26.92 E-value=3e+02 Score=31.95 Aligned_cols=38 Identities=24% Similarity=0.369 Sum_probs=22.7
Q ss_pred hhcCHHHHHHHHHHHHHHHHHhhCCCCcEEEeCCCCCCCcceEEEEeccCC
Q 043646 373 EYIGYEVIKKQEDVYIESALGRILPNQNIQVLGNTSVKRQAILSFLVYSTT 423 (625)
Q Consensus 373 ~~~g~~~i~~~~~~l~~~l~~~L~~l~gv~v~~~~~~~~~~i~~f~~~~~~ 423 (625)
+..|++.+.+|+.+... ...|+ + ..++.|+||.-.|+.
T Consensus 412 DHYgm~dVKeRILEfiA--V~kLr--------g---s~qGkIlCf~GPPGV 449 (906)
T KOG2004|consen 412 DHYGMEDVKERILEFIA--VGKLR--------G---SVQGKILCFVGPPGV 449 (906)
T ss_pred cccchHHHHHHHHHHHH--HHhhc--------c---cCCCcEEEEeCCCCC
Confidence 45678777776655321 12222 1 337789999887765
No 431
>PLN02970 serine racemase
Probab=25.68 E-value=3e+02 Score=28.72 Aligned_cols=52 Identities=10% Similarity=0.024 Sum_probs=35.5
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|.++ ++..++..+|+ +..|+++...-......++..|++|+.++-
T Consensus 77 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 77 GVVTHSSGNHAAALALAAKLRGI------------------PAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred eEEEECCcHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 46655566665 66666666652 235888776666666678889999998874
No 432
>PRK00685 metal-dependent hydrolase; Provisional
Probab=24.96 E-value=6e+02 Score=24.35 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=39.2
Q ss_pred cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcC
Q 043646 201 SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYG 263 (625)
Q Consensus 201 ~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g 263 (625)
.+..+..++......+++++..+.... -+++.++.+|-.+......+.+++.+.+++.+
T Consensus 156 ~~~D~~~~~~~~~~h~~~~ea~~~~~~----~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~~~ 214 (228)
T PRK00685 156 HKPDVALLPIGDNFTMGPEDAALAVEL----IKPKIVIPMHYNTFPLIEQDPEKFKALVEGLG 214 (228)
T ss_pred hCCCEEEEecCCccccCHHHHHHHHHh----hCCCEEEEeccCCCcCCcCCHHHHHHHHHhcC
Confidence 466777777654556788777666653 35777888887654444456788887777633
No 433
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.94 E-value=1.2e+02 Score=32.35 Aligned_cols=63 Identities=13% Similarity=0.133 Sum_probs=41.1
Q ss_pred eEEEEecCCCC-CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 204 EVVEIGLDDNG-LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 204 ~vv~v~~~~~~-~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
.+..++..+.. ..+.+.|.+.+... -....+++++- .--|.+.+++.+.++|++.|+++++|-
T Consensus 115 QllRvD~Ee~~~~~~~~~ll~~~~~~--l~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 115 QLLRLDFEEKFPIEDENKLLEKIKNA--LKSFDALVLSD--YAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred eEEEecccccCcchhHHHHHHHHHHH--hhcCCEEEEec--cccccchhHHHHHHHHHHcCCcEEECC
Confidence 44444443322 23445555555421 12456777763 456999999999999999999999993
No 434
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=24.79 E-value=4.6e+02 Score=22.70 Aligned_cols=64 Identities=17% Similarity=0.045 Sum_probs=42.3
Q ss_pred HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc---CCEEEEecc
Q 043646 198 WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY---GGFACFDFA 271 (625)
Q Consensus 198 ~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~---g~~vivD~A 271 (625)
++..|.+++....+ +.++++.+++.+ .++.+|.+|... +-....++++.+.+++. ++.+++=++
T Consensus 23 l~~~G~~vi~lG~~----vp~e~~~~~a~~----~~~d~V~iS~~~--~~~~~~~~~~~~~L~~~~~~~i~i~~GG~ 89 (122)
T cd02071 23 LRDAGFEVIYTGLR----QTPEEIVEAAIQ----EDVDVIGLSSLS--GGHMTLFPEVIELLRELGAGDILVVGGGI 89 (122)
T ss_pred HHHCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEcccc--hhhHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 45568898877644 467777666664 578888887654 23334468888888776 456666554
No 435
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=23.76 E-value=63 Score=35.79 Aligned_cols=30 Identities=17% Similarity=0.103 Sum_probs=27.4
Q ss_pred ccCccccccCHHHHHHHHHHcCCEEEEecc
Q 043646 242 CSNVTGIYSDTRSIARLLHQYGGFACFDFA 271 (625)
Q Consensus 242 ~~n~TG~~~~l~~I~~la~~~g~~vivD~A 271 (625)
+....|...+++++++.||++|+.|++|.+
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 456679999999999999999999999998
No 436
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=23.74 E-value=9.7e+02 Score=26.07 Aligned_cols=128 Identities=11% Similarity=0.118 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHhCCCC-----CCcEEEeCC---hHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCc
Q 043646 121 KMVHEASNYIKRCLGGGQ-----ADAIIFCGA---GTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHH 192 (625)
Q Consensus 121 ~~~~~~~~~ia~~~g~~~-----~~~vift~s---Gttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~ 192 (625)
+....+.+.+...++... ...+.|+|. |=|..+..++..+ ...|.+ +.++....+.
T Consensus 218 ~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L---------------~~~Gkk-VglI~aDt~R 281 (436)
T PRK11889 218 EVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQF---------------HGKKKT-VGFITTDHSR 281 (436)
T ss_pred HHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHH---------------HHcCCc-EEEEecCCcc
Confidence 344555566666555431 124556553 4444555555444 123444 3444444443
Q ss_pred -hhHHHHHH----cCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHH---cCC
Q 043646 193 -SNLLSWRQ----SLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ---YGG 264 (625)
Q Consensus 193 -s~~~~~~~----~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~---~g~ 264 (625)
+....|+. .|+.+..+. +.+++.+++.......+..+|++..+-...-...-++++.++.+. +.+
T Consensus 282 iaAvEQLk~yae~lgipv~v~~-------d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~Pdev 354 (436)
T PRK11889 282 IGTVQQLQDYVKTIGFEVIAVR-------DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYI 354 (436)
T ss_pred hHHHHHHHHHhhhcCCcEEecC-------CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeE
Confidence 33334433 355544332 567777777642111235678887653322222235666666654 467
Q ss_pred EEEEecc
Q 043646 265 FACFDFA 271 (625)
Q Consensus 265 ~vivD~A 271 (625)
++++|++
T Consensus 355 lLVLsAT 361 (436)
T PRK11889 355 CLTLSAS 361 (436)
T ss_pred EEEECCc
Confidence 8888876
No 437
>PLN03013 cysteine synthase
Probab=23.58 E-value=3.4e+02 Score=29.56 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=37.2
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEecC
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGLD 211 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~~ 211 (625)
.|+-.++|.++ ++..++..+|+ +.+|+++..........++..|++|+.++.+
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~~G~------------------~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAASRGY------------------RLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC------------------CEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 35555566666 67777666652 2358888777777777888999999988643
No 438
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=23.32 E-value=1e+03 Score=26.08 Aligned_cols=29 Identities=14% Similarity=0.045 Sum_probs=22.6
Q ss_pred cEEEEecCCCCCHHHHHHHHHHHHHHHHh
Q 043646 494 GWTRITFPYYMSNEEFEFILAALEFIAAY 522 (625)
Q Consensus 494 g~iRis~~~~~t~edid~ll~aL~~~~~~ 522 (625)
...||+-|.-++.+||.++++..+..-..
T Consensus 389 R~~Ria~GsG~~~~~v~~ll~~~~~~~~~ 417 (437)
T PRK00771 389 RIRRIARGSGTTVEDVRELLKYYKMMKKA 417 (437)
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHHHH
Confidence 34689988888999999999877765433
No 439
>PRK02991 D-serine dehydratase; Provisional
Probab=23.08 E-value=8e+02 Score=26.84 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=35.6
Q ss_pred EEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 142 IIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 142 vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
|+-.++|..+ ++...+..+|+ +..|+++...-......++..|++|+.++-
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~------------------~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~ 211 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGF------------------KVTVHMSADARQWKKDKLRSHGVTVVEYEG 211 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHhCCCEEEEECC
Confidence 5555455555 66666666652 235888877777777788999999998773
No 440
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=23.06 E-value=8.5 Score=36.20 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=30.4
Q ss_pred CCeEEEEecccCccccccCHHHHHHHHHHcC--CEEEEeccCcCCCcc
Q 043646 233 RPMLGSFSACSNVTGIYSDTRSIARLLHQYG--GFACFDFAASGPYVK 278 (625)
Q Consensus 233 ~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g--~~vivD~A~~~g~~~ 278 (625)
....|.+-. |.+..+..+.+.+|++| ++||+|-..+.+..+
T Consensus 19 ~~~~vfLl~-----g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D~ 61 (175)
T PF04309_consen 19 DVEVVFLLT-----GDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRDE 61 (175)
T ss_dssp SSSEEEE-S-----EECCCHHHHHHHHHHTT-EEEEECCGEETB-SSH
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCCH
Confidence 455555543 78999999999999987 688889887776543
No 441
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=23.02 E-value=2.3e+02 Score=27.13 Aligned_cols=52 Identities=12% Similarity=-0.058 Sum_probs=37.2
Q ss_pred HHHHHHHHHhh-h--CCCCeEEEEecccCccccccCHHHHHHHHHHcCCEEEEec
Q 043646 219 EALRSQLELYK-A--AKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFACFDF 270 (625)
Q Consensus 219 ~~L~~~l~~~~-~--~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~ 270 (625)
+++..+++.-. . .+.-.+|+++-.+|.+|.+.|.+.-+++++++|+.++.=+
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 77777665421 1 1223588889899889999998888899999998766433
No 442
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=22.30 E-value=7.2e+02 Score=25.28 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=35.3
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|..+ ++...+..+|+ +..|+++...-......++..|++|+.++-
T Consensus 59 ~vv~aSsGN~g~alA~~a~~~Gl------------------~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 59 TIVEPTSGNTGIALAMVAAARGY------------------KLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred EEEEeCCChhHHHHHHHHHHcCC------------------eEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 45554455554 66666666642 235888877667777778889999998874
No 443
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=22.29 E-value=1.7e+02 Score=27.35 Aligned_cols=81 Identities=14% Similarity=0.028 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHH---cC--CEEEEeccCcCCCccccCCCCCCCC
Q 043646 214 GLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ---YG--GFACFDFAASGPYVKINLRSRNIDG 288 (625)
Q Consensus 214 ~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~---~g--~~vivD~A~~~g~~~id~~~~~~~~ 288 (625)
+.+..++|.+++.+-...++.+.|++.. +++.|.+...+++.++.++ .+ ++..+++....+...+-+ .
T Consensus 20 ~~~~~~~l~~~l~~a~~d~~v~~vvl~~-~~~gg~~~~~~~~~~~i~~~~~~~kpVia~v~G~a~g~g~~la~------a 92 (177)
T cd07014 20 GNVSGDTTAAQIRDARLDPKVKAIVLRV-NSPGGSVTASEVIRAELAAARAAGKPVVASGGGNAASGGYWIST------P 92 (177)
T ss_pred CCcCHHHHHHHHHHHhcCCCceEEEEEe-eCCCcCHHHHHHHHHHHHHHHhCCCCEEEEECCchhHHHHHHHH------h
Confidence 4567888888887544446788888875 4455554444555544433 34 566677543332222222 4
Q ss_pred CcEEEEcCCCCCC
Q 043646 289 YDAIFLATHKFLG 301 (625)
Q Consensus 289 ~D~v~~S~hK~lg 301 (625)
+|.+..++.=.|+
T Consensus 93 ~D~i~a~~~a~~~ 105 (177)
T cd07014 93 ANYIVANPSTLVG 105 (177)
T ss_pred CCEEEECCCCeEE
Confidence 6777776544443
No 444
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.19 E-value=8.3e+02 Score=24.77 Aligned_cols=69 Identities=6% Similarity=-0.068 Sum_probs=42.5
Q ss_pred CCchhHHHHHHcCCeEEEE-ecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHcCCEE
Q 043646 190 EHHSNLLSWRQSLAEVVEI-GLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQYGGFA 266 (625)
Q Consensus 190 ~h~s~~~~~~~~G~~vv~v-~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~g~~v 266 (625)
.|+++..-.+..|.+++.+ ...++....+.+|.+.++.- ...+.++|+.....+. +.+..++++.|+.+
T Consensus 183 ~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~i-k~~~v~~if~e~~~~~-------~~~~~ia~~~gv~v 252 (287)
T cd01137 183 SEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQV-KKEKVPAVFVESTVND-------RLMKQVAKETGAKI 252 (287)
T ss_pred ecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHH-HHhCCCEEEEeCCCCh-------HHHHHHHHHhCCcc
Confidence 4566666677889987754 33344566777776665421 1146777766554332 55667788888764
No 445
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.72 E-value=1e+03 Score=25.56 Aligned_cols=54 Identities=9% Similarity=0.041 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHHc----CCEEEEeccCc
Q 043646 217 DIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQY----GGFACFDFAAS 273 (625)
Q Consensus 217 d~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~~----g~~vivD~A~~ 273 (625)
+.+++.+.+... .+..+|++..+--.......+.++.++.... ..++++|++..
T Consensus 241 ~~~~l~~~L~~~---~~~DlVLIDTaGr~~~~~~~l~el~~~l~~~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 241 SFKDLKEEITQS---KDFDLVLVDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTK 298 (388)
T ss_pred cHHHHHHHHHHh---CCCCEEEEcCCCCCccCHHHHHHHHHHHHhcCCCCeEEEEEcCCCC
Confidence 467777777642 3567888877654433333356776766643 57899998743
No 446
>PLN02565 cysteine synthase
Probab=21.54 E-value=4.1e+02 Score=27.61 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=36.4
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|..+ ++..++..+|+ +.+|+++...-......++..|++|+.++.
T Consensus 69 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 69 VLIEPTSGNTGIGLAFMAAAKGY------------------KLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEEECCChHHHHHHHHHHHcCC------------------eEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 35544456665 77777776653 235788877777777788999999998764
No 447
>PRK10595 SOS cell division inhibitor; Provisional
Probab=21.09 E-value=6.6e+02 Score=23.42 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=46.5
Q ss_pred CCCCceEEEEcCCCCchhHHHHHHcCC---eEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEeccc-CccccccCH
Q 043646 177 RDEERWVVFLGPYEHHSNLLSWRQSLA---EVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACS-NVTGIYSDT 252 (625)
Q Consensus 177 ~~gd~~~Vlv~~~~h~s~~~~~~~~G~---~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~-n~TG~~~~l 252 (625)
...+++++++.++.-++. ..+...|. +++.|.... ..-.+..+|++|.. ...-+++.+.. ..+ ..++
T Consensus 53 ~~~~rwilwI~PP~~p~~-~~L~~~Gl~l~rvl~v~~~~-~~d~Lwa~EqaLrs-----G~~~aVL~Wlp~~l~--~~~~ 123 (164)
T PRK10595 53 GQQSRWQLWLTPQQKLSR-EWLQASGLPLTKVMQLSQLS-PCHTVEAMERALRT-----GNYSVVLGWLPDELT--EEEH 123 (164)
T ss_pred hccCceEEEECCCCCCCH-HHHHHcCCCcccEEEEecCC-cHHHHHHHHHHHhh-----CCCcEEEECCcccCC--HHHH
Confidence 455678888888766654 46777887 455554322 12245777888883 44444555532 221 3446
Q ss_pred HHHHHHHHHcCCE
Q 043646 253 RSIARLLHQYGGF 265 (625)
Q Consensus 253 ~~I~~la~~~g~~ 265 (625)
+++--.|++-+.+
T Consensus 124 RRLQlAAe~g~~l 136 (164)
T PRK10595 124 ARLVDAAQEGNAM 136 (164)
T ss_pred HHHHHHHHhCCCE
Confidence 7776666666554
No 448
>PRK11761 cysM cysteine synthase B; Provisional
Probab=21.03 E-value=7.1e+02 Score=25.42 Aligned_cols=52 Identities=17% Similarity=0.216 Sum_probs=36.0
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|..+ ++..++..+|+ +..|+++...-......++..|++|+.++.
T Consensus 65 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 65 TLIEATSGNTGIALAMIAAIKGY------------------RMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEEeCCChHHHHHHHHHHHcCC------------------CEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 56666566665 66666666642 235777776666777778889999999984
No 449
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=20.74 E-value=3.6e+02 Score=26.23 Aligned_cols=79 Identities=19% Similarity=0.188 Sum_probs=49.6
Q ss_pred CCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHHHHHHHH---cC--CEEEEeccCcCCCccccCCCCCCCCC
Q 043646 215 LLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSIARLLHQ---YG--GFACFDFAASGPYVKINLRSRNIDGY 289 (625)
Q Consensus 215 ~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I~~la~~---~g--~~vivD~A~~~g~~~id~~~~~~~~~ 289 (625)
...++.|.+.|++....++.+.|++.- +++.|....+++|.+..++ .+ ++.++|.+.+.+|. +-. .+
T Consensus 28 ~~~~~~l~~~l~~a~~d~~ik~vvL~~-~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~-las------aa 99 (222)
T cd07018 28 ELSLRDLLEALEKAAEDDRIKGIVLDL-DGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYY-LAS------AA 99 (222)
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEEEC-CCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhh-hhh------hC
Confidence 456778888887544446788888874 6688888888887766643 33 45566654444332 111 56
Q ss_pred cEEEEcCCCCCC
Q 043646 290 DAIFLATHKFLG 301 (625)
Q Consensus 290 D~v~~S~hK~lg 301 (625)
|-++.++.-.+|
T Consensus 100 d~I~a~p~~~vg 111 (222)
T cd07018 100 DEIYLNPSGSVE 111 (222)
T ss_pred CEEEECCCceEE
Confidence 777777655544
No 450
>PRK05638 threonine synthase; Validated
Probab=20.72 E-value=5e+02 Score=28.35 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=33.6
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEe
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIG 209 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~ 209 (625)
.|+..++|.++ ++...+...|+ +..|+++...-......++..|++|+.++
T Consensus 114 ~vv~aSsGN~g~alA~~aa~~G~------------------~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 114 GFIVASDGNAAASVAAYSARAGK------------------EAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEEeCCChHHHHHHHHHHHcCC------------------CEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 45555455555 66666555542 23588877665666667888999999986
No 451
>PLN00011 cysteine synthase
Probab=20.67 E-value=6.9e+02 Score=25.87 Aligned_cols=52 Identities=17% Similarity=0.143 Sum_probs=35.3
Q ss_pred cEEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 141 AIIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 141 ~vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
.|+-.++|..+ ++..++..+|+ +..|+++...-......++..|++|+.++-
T Consensus 71 ~vv~aSsGN~g~alA~~a~~~G~------------------~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 71 TLIEATAGNTGIGLACIGAARGY------------------KVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEEeCCChHHHHHHHHHHHcCC------------------eEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 46555455555 66666666653 235777776666777788899999998874
No 452
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=20.58 E-value=5.8e+02 Score=23.69 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=36.7
Q ss_pred CCCceEEEEcCCC--Cch---hHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhC-CCCeEEEEecccCccccccC
Q 043646 178 DEERWVVFLGPYE--HHS---NLLSWRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAA-KRPMLGSFSACSNVTGIYSD 251 (625)
Q Consensus 178 ~gd~~~Vlv~~~~--h~s---~~~~~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~-~~~~lv~~~~~~n~TG~~~~ 251 (625)
.+.+.+|+++... ... .+..++..|++|..+..|- -|.+++++++++-... ++...|+-.+.....+.+.+
T Consensus 23 ~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv---~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~ 99 (181)
T PF08659_consen 23 RGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDV---TDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQD 99 (181)
T ss_dssp TT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--T---TSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC
T ss_pred cCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCc---cCHHHHHHHHHHHHhccCCcceeeeeeeeeccccccc
Confidence 3444467777662 222 2334556799999998874 4788888888742211 23344555554444444433
Q ss_pred --HHHHHHHH
Q 043646 252 --TRSIARLL 259 (625)
Q Consensus 252 --l~~I~~la 259 (625)
.+++.+..
T Consensus 100 ~t~~~~~~~~ 109 (181)
T PF08659_consen 100 QTPDEFDAVL 109 (181)
T ss_dssp --HHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 34444433
No 453
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=20.54 E-value=1e+03 Score=25.93 Aligned_cols=80 Identities=15% Similarity=0.118 Sum_probs=49.2
Q ss_pred EEEEcCCCCchhHHH-HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcc--------ccccCH-
Q 043646 183 VVFLGPYEHHSNLLS-WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVT--------GIYSDT- 252 (625)
Q Consensus 183 ~Vlv~~~~h~s~~~~-~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~T--------G~~~~l- 252 (625)
+++++-.+-..-++. ...+|.....+-+- -..+++++.+.+.+ .+|.++++.+.++.. |.+.-+
T Consensus 123 vLYVsGEES~~QiklRA~RL~~~~~~l~l~--aEt~~e~I~~~l~~----~~p~lvVIDSIQT~~s~~~~SapGsVsQVR 196 (456)
T COG1066 123 VLYVSGEESLQQIKLRADRLGLPTNNLYLL--AETNLEDIIAELEQ----EKPDLVVIDSIQTLYSEEITSAPGSVSQVR 196 (456)
T ss_pred EEEEeCCcCHHHHHHHHHHhCCCccceEEe--hhcCHHHHHHHHHh----cCCCEEEEeccceeecccccCCCCcHHHHH
Confidence 566666555444322 33456432111111 13478999988885 589999998877642 544333
Q ss_pred ---HHHHHHHHHcCCEEEE
Q 043646 253 ---RSIARLLHQYGGFACF 268 (625)
Q Consensus 253 ---~~I~~la~~~g~~viv 268 (625)
.++.++||+.|+.+++
T Consensus 197 e~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 197 EVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHcCCeEEE
Confidence 5688899999987665
No 454
>PRK09354 recA recombinase A; Provisional
Probab=20.11 E-value=9.7e+02 Score=25.32 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=42.3
Q ss_pred EEEcCCCCchhHHHHHHcCCe---EEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCcccc------c-----
Q 043646 184 VFLGPYEHHSNLLSWRQSLAE---VVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGI------Y----- 249 (625)
Q Consensus 184 Vlv~~~~h~s~~~~~~~~G~~---vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~------~----- 249 (625)
+++-+.+|......++..|.. +.....+ .+.--++.++..+.+ ..+++|++.++....-. .
T Consensus 91 ~~yId~E~s~~~~~a~~lGvdld~lli~qp~-~~Eq~l~i~~~li~s----~~~~lIVIDSvaaL~~~~E~eg~~gd~~~ 165 (349)
T PRK09354 91 AAFIDAEHALDPVYAKKLGVDIDNLLVSQPD-TGEQALEIADTLVRS----GAVDLIVVDSVAALVPKAEIEGEMGDSHV 165 (349)
T ss_pred EEEECCccchHHHHHHHcCCCHHHeEEecCC-CHHHHHHHHHHHhhc----CCCCEEEEeChhhhcchhhhcCCccccch
Confidence 444455666555556666764 3333222 111012223333332 56889999888755421 0
Q ss_pred ---cC-----HHHHHHHHHHcCCEEEE
Q 043646 250 ---SD-----TRSIARLLHQYGGFACF 268 (625)
Q Consensus 250 ---~~-----l~~I~~la~~~g~~viv 268 (625)
.- +..|..+++++|+.+++
T Consensus 166 ~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 166 GLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 00 45577777889987664
No 455
>PRK07476 eutB threonine dehydratase; Provisional
Probab=20.06 E-value=8.6e+02 Score=25.11 Aligned_cols=51 Identities=20% Similarity=0.258 Sum_probs=34.0
Q ss_pred EEEeCChHHH-HHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhHHHHHHcCCeEEEEec
Q 043646 142 IIFCGAGTTA-AIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNLLSWRQSLAEVVEIGL 210 (625)
Q Consensus 142 vift~sGtta-al~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~~~~~~~G~~vv~v~~ 210 (625)
|+-.++|..+ ++..++..+|+ +..|+++...-......++..|++|+.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~G~------------------~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVTASTGNHGRALAYAARALGI------------------RATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHhCC------------------CEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 5444445554 66666666652 235777776666677778889999998873
No 456
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=20.05 E-value=4.9e+02 Score=27.25 Aligned_cols=144 Identities=17% Similarity=0.269 Sum_probs=77.9
Q ss_pred cEEEeC---ChHHHHHHHHHHHhcccccchhhhhhhhccCCCCceEEEEcCCCCchhH-H---HH-HHcCCeEEEEecCC
Q 043646 141 AIIFCG---AGTTAAIKRLQEVMGITVPSIMRDKLITSLRDEERWVVFLGPYEHHSNL-L---SW-RQSLAEVVEIGLDD 212 (625)
Q Consensus 141 ~vift~---sGttaal~~l~~~l~~~~~~~~~~~~~~~l~~gd~~~Vlv~~~~h~s~~-~---~~-~~~G~~vv~v~~~~ 212 (625)
.++|+| .|=|..|..++..+ .+.|-+ +++.-..++-+-. . .| ++.|++++.-+...
T Consensus 141 Vil~vGVNG~GKTTTIaKLA~~l---------------~~~g~~-VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~ 204 (340)
T COG0552 141 VILFVGVNGVGKTTTIAKLAKYL---------------KQQGKS-VLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGA 204 (340)
T ss_pred EEEEEecCCCchHhHHHHHHHHH---------------HHCCCe-EEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCC
Confidence 456665 45566788887766 345655 4555445544321 1 23 23577766543111
Q ss_pred CC-CCCHHHHHHHHHHhhhCCCCeEEEEecc---cCccccccCHHHHHHHHHHcC------CEEEEeccCcCCCcc--cc
Q 043646 213 NG-LLDIEALRSQLELYKAAKRPMLGSFSAC---SNVTGIYSDTRSIARLLHQYG------GFACFDFAASGPYVK--IN 280 (625)
Q Consensus 213 ~~-~ld~~~L~~~l~~~~~~~~~~lv~~~~~---~n~TG~~~~l~~I~~la~~~g------~~vivD~A~~~g~~~--id 280 (625)
+- .+-.++++.+.. .+..+|++... +|-+....+++.|.+++++.. +++++|+..+--.+. --
T Consensus 205 DpAaVafDAi~~Aka-----r~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~ 279 (340)
T COG0552 205 DPAAVAFDAIQAAKA-----RGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKI 279 (340)
T ss_pred CcHHHHHHHHHHHHH-----cCCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHH
Confidence 11 122344555544 45677777654 344555567888888888753 788889874421110 00
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCceEEE
Q 043646 281 LRSRNIDGYDAIFLATHKFLGGPGTPGILL 310 (625)
Q Consensus 281 ~~~~~~~~~D~v~~S~hK~lggp~g~G~l~ 310 (625)
+++. -++|.++++ |.=|...| |+++
T Consensus 280 F~ea--v~l~GiIlT--KlDgtAKG-G~il 304 (340)
T COG0552 280 FNEA--VGLDGIILT--KLDGTAKG-GIIL 304 (340)
T ss_pred HHHh--cCCceEEEE--ecccCCCc-ceee
Confidence 1110 156777776 66566665 5544
No 457
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=20.04 E-value=5.4e+02 Score=24.99 Aligned_cols=81 Identities=12% Similarity=0.016 Sum_probs=53.0
Q ss_pred ceEEEEcCCCCchhHHH-----HHHcCCeEEEEecCCCCCCCHHHHHHHHHHhhhCCCCeEEEEecccCccccccCHHHH
Q 043646 181 RWVVFLGPYEHHSNLLS-----WRQSLAEVVEIGLDDNGLLDIEALRSQLELYKAAKRPMLGSFSACSNVTGIYSDTRSI 255 (625)
Q Consensus 181 ~~~Vlv~~~~h~s~~~~-----~~~~G~~vv~v~~~~~~~ld~~~L~~~l~~~~~~~~~~lv~~~~~~n~TG~~~~l~~I 255 (625)
+.++.+.+.++|..-.- ++..|.+|+.+..+ +.++++.+++.+ .++.+|.++...+ .....++++
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~----vp~e~~v~~~~~----~~~~~V~lS~~~~--~~~~~~~~~ 159 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVM----VPIEKILEAAKE----HKADIIGLSGLLV--PSLDEMVEV 159 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCC----CCHHHHHHHHHH----cCCCEEEEccchh--ccHHHHHHH
Confidence 43344445566655322 35579999888754 578888888875 5788888876543 334567777
Q ss_pred HHHHHHc--CCEEEEecc
Q 043646 256 ARLLHQY--GGFACFDFA 271 (625)
Q Consensus 256 ~~la~~~--g~~vivD~A 271 (625)
.+.+++. ++.+++=++
T Consensus 160 i~~L~~~~~~~~i~vGG~ 177 (213)
T cd02069 160 AEEMNRRGIKIPLLIGGA 177 (213)
T ss_pred HHHHHhcCCCCeEEEECh
Confidence 7777776 456666554
No 458
>PLN03244 alpha-amylase; Provisional
Probab=20.01 E-value=87 Score=36.59 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=29.1
Q ss_pred EEecccCccccccCHHHHHHHHHHcCCEEEEeccC
Q 043646 238 SFSACSNVTGIYSDTRSIARLLHQYGGFACFDFAA 272 (625)
Q Consensus 238 ~~~~~~n~TG~~~~l~~I~~la~~~g~~vivD~A~ 272 (625)
.+-+++...|...+++.+++.||+.|+-||+|-++
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~ 463 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVH 463 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34455666777888999999999999999999884
Done!