Your job contains 1 sequence.
>043648
MDVDVVEVEEGMGQRGVSDDGEIEPNESAEANNAENSSAHGDDDGIMDPYVGMEFHTEDA
AKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHGESCDAMLRIELKG
QNKWVVTKFVKEHSHPMVSPSKVHYLRPRRHFAGTTKAEVYQGVGIVPSGIMYVSMDGNR
ATVETNNHGARTATPVETRTAPPIESRTAPPVESRTAPPIESRTAPPVESNRAVKNTGAL
NYVVRPANRRRTLGRDAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAY
SHFGDAVTLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTA
MNDCQPVSITTDQDKAIQIAVAKVFPEVRHCISKWHVELYNCINLTETIEEFELSWNSIL
DKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAAISPNQGFDGSFFDGYVNQQTTIPMFFR
QYERALENSFEREIEADFDTICTTPRLRTPSPMERQAANSFTRKVFTKFQEELVETFVYT
ANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMRANCSCQMFEYSGILCRHVLTVFTVT
NVLTLPSHYILKRWTRNAKTGIGVDERTAELHGQESLTMRYNNLCREAIKYSEDGAVAQE
TYNVAMSSIREGWKKVAVVKKNVAKVPPPGSHVSGTGYDDRKISASPSDSTPLLWPRQDE
MTRRFNLNDSGPAIQPVSDLNLPRMAPVSLHRDDGPSDNMVVLPCLKSMTWVMENKNSAP
GNRVAVINLKLHDYSKTPSAELEVKFQLSKVTLEPMLRSMAYISDQLSTPANRVAVINLK
V
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043648
(841 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059304 - symbol:FRS3 "FAR1-related sequence 3... 1619 2.0e-275 3
TAIR|locus:2121060 - symbol:FRS5 "FAR1-related sequence 5... 708 5.0e-142 3
TAIR|locus:2121003 - symbol:FRS9 "FAR1-related sequence 9... 681 9.4e-105 2
TAIR|locus:2082420 - symbol:FRS7 "FAR1-related sequence 7... 713 2.4e-89 2
TAIR|locus:2144930 - symbol:FRS12 "FAR1-related sequence ... 691 1.2e-87 2
TAIR|locus:2014639 - symbol:FRS4 "FAR1-related sequence 4... 442 2.3e-85 3
TAIR|locus:2090394 - symbol:FHY3 "far-red elongated hypoc... 454 7.1e-80 3
TAIR|locus:2016259 - symbol:FRS8 "FAR1-related sequence 8... 374 2.5e-67 3
TAIR|locus:2035144 - symbol:FRS6 "FAR1-related sequence 6... 340 2.7e-60 3
TAIR|locus:2129665 - symbol:FAR1 "FAR-RED IMPAIRED RESPON... 501 7.5e-58 2
TAIR|locus:2012828 - symbol:FRS11 "FAR1-related sequence ... 279 9.4e-44 3
TAIR|locus:2062606 - symbol:FRS2 "FAR1-related sequence 2... 373 2.4e-40 2
TAIR|locus:2182778 - symbol:FRS10 "FAR1-related sequence ... 288 4.6e-29 2
TAIR|locus:2041041 - symbol:AT2G43280 species:3702 "Arabi... 214 2.3e-16 1
TAIR|locus:2079651 - symbol:AT3G07500 "AT3G07500" species... 208 1.0e-15 1
TAIR|locus:2097543 - symbol:AT3G59470 species:3702 "Arabi... 202 4.5e-15 1
TAIR|locus:2135738 - symbol:AT4G12850 "AT4G12850" species... 167 2.5e-11 1
>TAIR|locus:2059304 [details] [associations]
symbol:FRS3 "FAR1-related sequence 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC005623 InterPro:IPR018289 Pfam:PF10551
EMBL:AY057491 EMBL:BT002690 IPI:IPI00526037 IPI:IPI00657216
PIR:H84668 RefSeq:NP_001031428.1 RefSeq:NP_565636.1
RefSeq:NP_850098.1 UniGene:At.22269 IntAct:Q9ZVC9 PaxDb:Q9ZVC9
PRIDE:Q9ZVC9 EnsemblPlants:AT2G27110.1 EnsemblPlants:AT2G27110.2
GeneID:817253 KEGG:ath:AT2G27110 TAIR:At2g27110 eggNOG:NOG302035
HOGENOM:HOG000241939 InParanoid:Q9ZVC9 OMA:LWPRQDE PhylomeDB:Q9ZVC9
ProtClustDB:CLSN2688464 Genevestigator:Q9ZVC9 Uniprot:Q9ZVC9
Length = 851
Score = 1619 (575.0 bits), Expect = 2.0e-275, Sum P(3) = 2.0e-275
Identities = 307/453 (67%), Positives = 356/453 (78%)
Query: 391 CIS--KWHVELYNCINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRD 448
C++ + VELYNCIN TETIEEFE SW+S++DKYDL H+WL SLYNAR+QWVPVYFRD
Sbjct: 349 CLAYPSFQVELYNCINFTETIEEFESSWSSVIDKYDLGRHEWLNSLYNARAQWVPVYFRD 408
Query: 449 SFFAAISPNQGFDGSFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLR 508
SFFAA+ P+QG+ GSFFDGYVNQQTT+PMFFR YERA+E+ FE EIEAD DT+ T P L+
Sbjct: 409 SFFAAVFPSQGYSGSFFDGYVNQQTTLPMFFRLYERAMESWFEMEIEADLDTVNTPPVLK 468
Query: 509 TPSPMERQAANSFTRKVFTKFQEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVT 568
TPSPME QAAN FTRK+F KFQEELVETF +TAN IE DG STFRVA FE+D++AYIVT
Sbjct: 469 TPSPMENQAANLFTRKIFGKFQEELVETFAHTANRIEDDGTTSTFRVANFENDNKAYIVT 528
Query: 569 FNHPEMRANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERT 628
F +PEMRANCSCQMFE+SGILCRH P HYIL+RWTRNAK+ + +DE
Sbjct: 529 FCYPEMRANCSCQMFEHSGILCRHVLTVFTVTNILTLPPHYILRRWTRNAKSMVELDEHV 588
Query: 629 AELHGQESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIREGWXXXXXXXXXXXXXPP 688
+E +G +S RYN+LCREAIKY+E+GA+ E YN+A+ +REG P
Sbjct: 589 SE-NGHDSSIHRYNHLCREAIKYAEEGAITAEAYNIALGQLREGGKKVSVVRKRIGRAAP 647
Query: 689 PGSHVSGTGYDDRKISASPSDSTPLLWPRQDEMTRRFNLNDSGPAIQPVSDLNLPRMAPV 748
P SH G G D K S S +D+TPLLWPRQDEM RRFNLND G Q VSDLNLPRMAPV
Sbjct: 648 PSSHGGGIGSGD-KTSLSAADTTPLLWPRQDEMIRRFNLNDGGARAQSVSDLNLPRMAPV 706
Query: 749 SLHRDDGPSDNMVVLPCLKSMTWVMENKNSAPGNRVAVINLKLHDYSKTPSAELEVKFQL 808
SLHRDD +NMV LPCLKS+TW ME+KN+ PG RVAVINLKLHDY K PSA+++VKFQL
Sbjct: 707 SLHRDDTAPENMVALPCLKSLTWGMESKNTMPGGRVAVINLKLHDYRKFPSADMDVKFQL 766
Query: 809 SKVTLEPMLRSMAYISDQLSTPANRVAVINLKV 841
S VTLEPMLRSMAYIS+QLS+PANRVAVINLK+
Sbjct: 767 SSVTLEPMLRSMAYISEQLSSPANRVAVINLKL 799
Score = 644 (231.8 bits), Expect = 2.0e-275, Sum P(3) = 2.0e-275
Identities = 115/160 (71%), Positives = 136/160 (85%)
Query: 238 GALNYVVRPANRRRTLGRDAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSR 297
GA N + N +RT+GRDA NLL+YFK+MQAENPGFFYA+QLD+DN+M+NVFWAD+RSR
Sbjct: 179 GARNASMA-TNTKRTIGRDAHNLLEYFKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSR 237
Query: 298 TAYSHFGDAVTLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTF 357
AY+HFGD VTLDTRYR Q+ VPFAPFTG+NHHGQ ILFGCAL+LD+S+ SF+WLFKTF
Sbjct: 238 VAYTHFGDTVTLDTRYRCNQFRVPFAPFTGVNHHGQAILFGCALILDESDTSFIWLFKTF 297
Query: 358 LTAMNDCQPVSITTDQDKAIQIAVAKVFPEVRHCISKWHV 397
LTAM D PVS+ TDQD+AIQIA +VFP RHCI+KW V
Sbjct: 298 LTAMRDQPPVSLVTDQDRAIQIAAGQVFPGARHCINKWDV 337
Score = 426 (155.0 bits), Expect = 2.0e-275, Sum P(3) = 2.0e-275
Identities = 92/191 (48%), Positives = 120/191 (62%)
Query: 12 MGQRGVSDDGEIEPXXXXXXXXXXXXXXHGDDDGIMDPYVGMEFHTEDAAKTFYDEYARR 71
MG + D+G++EP D+ GI +P VGMEF++E AK+FYDEY+R+
Sbjct: 12 MGNHEIGDEGDVEPSDCSGQNNMDNSLGVQDEIGIAEPCVGMEFNSEKEAKSFYDEYSRQ 71
Query: 72 VGFSSKVCHFSRPRPDEPIVFREFVCGREGL--KRRHGESCDAMLRIELKGQNKWVVTKF 129
+GF+SK+ PR D + REFVC KRR ESCDAM+RIEL+G KWVVTKF
Sbjct: 72 LGFTSKLL----PRTDGSVSVREFVCSSSSKRSKRRLSESCDAMVRIELQGHEKWVVTKF 127
Query: 130 VKEHSHPMVSPSKVHYLRPRRHFAGTTKAEVYQGVGIVPSGIMYVSMDGNRATVETNNHG 189
VKEH+H + S + +H LRPRRHFA + K+ +GV VPSG+MYVSMD N + G
Sbjct: 128 VKEHTHGLASSNMLHCLRPRRHFANSEKSSYQEGVN-VPSGMMYVSMDAN-------SRG 179
Query: 190 ARTATPVETRT 200
AR A+ + T T
Sbjct: 180 ARNAS-MATNT 189
Score = 171 (65.3 bits), Expect = 1.2e-122, Sum P(3) = 1.2e-122
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 764 PCLKSMTWVMENKNSAPGNRVAVINLKLHDYSKTPSAELEVKFQLSKVTLEPMLRSMAYI 823
P L+SM ++ E +S P NRVAVINLKL D ++T + E EVKFQ+S+ TL MLRSMAYI
Sbjct: 773 PMLRSMAYISEQLSS-PANRVAVINLKLQD-TETTTGESEVKFQVSRDTLGAMLRSMAYI 830
Query: 824 SDQLS 828
+QLS
Sbjct: 831 REQLS 835
>TAIR|locus:2121060 [details] [associations]
symbol:FRS5 "FAR1-related sequence 5" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL035538
EMBL:AL161593 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000241939
EMBL:AY136457 IPI:IPI00529649 PIR:T05645 RefSeq:NP_195531.1
UniGene:At.31195 UniGene:At.48951 PRIDE:Q9SZL8
EnsemblPlants:AT4G38180.1 GeneID:829974 KEGG:ath:AT4G38180
TAIR:At4g38180 eggNOG:NOG236180 InParanoid:Q9SZL8 OMA:RNNRQKS
PhylomeDB:Q9SZL8 ProtClustDB:CLSN2685396 Genevestigator:Q9SZL8
Uniprot:Q9SZL8
Length = 788
Score = 708 (254.3 bits), Expect = 5.0e-142, Sum P(3) = 5.0e-142
Identities = 135/301 (44%), Positives = 200/301 (66%)
Query: 375 KAIQIAVAKVFPEVRHCISKWHVELYNCINLTETIEEFELSWNSILDKYDLRGHDWLQSL 434
K Q ++ VF ++H + + + C+NLTE++E+FE W S+LDKY+LR H+WLQ++
Sbjct: 392 KKCQEKLSHVF--LKH--PSFESDFHKCVNLTESVEDFERCWFSLLDKYELRDHEWLQAI 447
Query: 435 YNARSQWVPVYFRDSFFAAISPNQGFDG--SFFDGYVNQQTTIPMFFRQYERALENSFER 492
Y+ R QWVPVY RD+FFA +S D S+FDGY+N T + FF+ YE+ALE+ E+
Sbjct: 448 YSDRRQWVPVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFFKLYEKALESRLEK 507
Query: 493 EIEADFDTICTTPRLRTPSPMERQAANSFTRKVFTKFQEELVETFVYTANGIESDGAIST 552
E++AD+DT+ + P L+TPSPME+QA+ +TRK+F +FQEELV T + A+ + DG + T
Sbjct: 508 EVKADYDTMNSPPVLKTPSPMEKQASELYTRKLFMRFQEELVGTLTFMASKADDDGDLVT 567
Query: 553 FRVAKFEDDSRAYIVTFNHPEMRANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILK 612
++VAK+ + +A+ V FN EMRANCSCQMFE+SGI+CRH P +YILK
Sbjct: 568 YQVAKYGEAHKAHFVKFNVLEMRANCSCQMFEFSGIICRHILAVFRVTNLLTLPPYYILK 627
Query: 613 RWTRNAKTGIGVDERTAELHGQ--ESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIR 670
RWTRNAK+ + D+ + ES T+RYN L +A + ++ + T +VA+ +++
Sbjct: 628 RWTRNAKSSVIFDDYNLHAYANYLESHTVRYNTLRHKASNFVQEAGKSLYTCDVAVVALQ 687
Query: 671 E 671
E
Sbjct: 688 E 688
Score = 471 (170.9 bits), Expect = 5.0e-142, Sum P(3) = 5.0e-142
Identities = 83/155 (53%), Positives = 112/155 (72%)
Query: 248 NRRRTLGRDAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAV 307
NR++++ + Q LLDY ++M A+NP FFY++Q +D + NVFWAD ++ ++HFGD V
Sbjct: 241 NRQKSIEGEIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTV 300
Query: 308 TLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPV 367
T DT YR +Y +PFAPFTG+NHHGQ ILFGCA +++++EASFVWLF T+L AM+ PV
Sbjct: 301 TFDTTYRSNRYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPV 360
Query: 368 SITTDQDKAIQIAVAKVFPEVRHCISKWHVELYNC 402
SITTD D I+ A+ VFP RH KWH+ L C
Sbjct: 361 SITTDHDAVIRAAIMHVFPGARHRFCKWHI-LKKC 394
Score = 246 (91.7 bits), Expect = 5.0e-142, Sum P(3) = 5.0e-142
Identities = 49/127 (38%), Positives = 75/127 (59%)
Query: 47 MDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRH 106
++PY G+EF +E+AAK FY+ YARR+GFS++V R R D I+ R+FVC +EG + +
Sbjct: 71 LEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMN 130
Query: 107 GE----------------SCDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKVHYLRPRR 150
+ C A L ++++ KW+V+ FVK+H+H +V P +VH LR R
Sbjct: 131 EKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHR 190
Query: 151 HFAGTTK 157
+G K
Sbjct: 191 QISGPAK 197
>TAIR|locus:2121003 [details] [associations]
symbol:FRS9 "FAR1-related sequence 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL035538 EMBL:AL161593 InterPro:IPR018289
Pfam:PF10551 HOGENOM:HOG000241939 UniGene:At.31195 UniGene:At.48951
EMBL:BX827635 EMBL:AK229615 IPI:IPI00517549 PIR:T05644
RefSeq:NP_195530.2 PaxDb:Q9SZL7 PRIDE:Q9SZL7
EnsemblPlants:AT4G38170.1 GeneID:829973 KEGG:ath:AT4G38170
TAIR:At4g38170 eggNOG:NOG320990 InParanoid:Q9SZL7 OMA:RCEVYRA
Genevestigator:Q9SZL7 Uniprot:Q9SZL7
Length = 545
Score = 681 (244.8 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 130/277 (46%), Positives = 186/277 (67%)
Query: 398 ELYNCINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAAISPN 457
E NC+ TET EFE SW+SI+ +Y + +DWLQS+YNAR QWV V+ RD+F+ +S N
Sbjct: 176 EFINCVTETETAAEFEASWDSIVRRYYMEDNDWLQSIYNARQQWVRVFIRDTFYGELSTN 235
Query: 458 QGFD--GSFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMER 515
+G SFF G+V+ TT+ M +QYE+A+++ E+E++AD++ +TP ++TPSPME+
Sbjct: 236 EGSSILNSFFQGFVDASTTMQMLIKQYEKAIDSWREKELKADYEATNSTPVMKTPSPMEK 295
Query: 516 QAANSFTRKVFTKFQEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMR 575
QAA+ +TR F KFQEE VET AN I G +T+RVAKF + + + V+F+ E++
Sbjct: 296 QAASLYTRAAFIKFQEEFVETLAIPANIISDSGTHTTYRVAKFGEVHKGHTVSFDSLEVK 355
Query: 576 ANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHG-Q 634
ANCSCQMFEYSGI+CRH PS Y+L+RWT+ AK G +E+ +G Q
Sbjct: 356 ANCSCQMFEYSGIICRHILAVFSAKNVLALPSRYLLRRWTKEAKIR-GTEEQPEFSNGCQ 414
Query: 635 ESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIRE 671
ESL + +N+L +EA KY E+GA + + Y VAM ++ E
Sbjct: 415 ESLNLCFNSLRQEATKYVEEGAKSIQIYKVAMDALDE 451
Score = 376 (137.4 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 72/133 (54%), Positives = 96/133 (72%)
Query: 258 QNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAVTLDTRYRV-Y 316
+++L+Y K+ Q ENPGF YAI+ DD NVFWAD R Y++FGD + DT YR
Sbjct: 19 EHVLNYLKRRQLENPGFLYAIE--DD--CGNVFWADPTCRLNYTYFGDTLVFDTTYRRGK 74
Query: 317 QYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPVSITTDQDKA 376
+Y VPFA FTG NHHGQ +LFGCAL+L++SE+SF WLF+T+L AM+ P SIT + D+
Sbjct: 75 RYQVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDRL 134
Query: 377 IQIAVAKVFPEVR 389
IQ+AV++VF + R
Sbjct: 135 IQVAVSRVFSQTR 147
>TAIR|locus:2082420 [details] [associations]
symbol:FRS7 "FAR1-related sequence 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC018907
InterPro:IPR018289 Pfam:PF10551 eggNOG:NOG292373
HOGENOM:HOG000112649 ProtClustDB:CLSN2686747 EMBL:AF360270
EMBL:AY150446 IPI:IPI00534625 RefSeq:NP_566278.1 UniGene:At.19021
UniGene:At.74222 PRIDE:Q9M8J3 EnsemblPlants:AT3G06250.1
GeneID:819799 KEGG:ath:AT3G06250 TAIR:At3g06250 InParanoid:Q9M8J3
OMA:RCGNEIE PhylomeDB:Q9M8J3 Genevestigator:Q9M8J3 Uniprot:Q9M8J3
Length = 764
Score = 713 (256.0 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 170/443 (38%), Positives = 237/443 (53%)
Query: 247 ANRRRTLGRDAQN-LLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGD 305
+ R T+G++ LLDYF+ QAE+ GFFYAI+LD + ++FWAD+RSR A S FGD
Sbjct: 315 STRENTIGKEWYPVLLDYFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSRFACSQFGD 374
Query: 306 AVTLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQ 365
AV DT YR Y+VPFA F G NHH Q +L G AL+ D+S+ +F WLF+T+L AM+ +
Sbjct: 375 AVVFDTSYRKGDYSVPFATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTWLRAMSGRR 434
Query: 366 PVSITTDQDKAIQIAVAKVFPEVRHCISKWHVELYNCINLTETIEEFELSWNSILDKYDL 425
P S+ DQD IQ AVA+VFP H S W + NL EF+ + L +
Sbjct: 435 PRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRSKERENLRSFPNEFKYEYEKCLYQSQT 494
Query: 426 RGH-D--W--LQSLYNAR-SQWV-PVYF-RDSFFAAISPNQGFDGSFFDG-----Y---V 469
D W L + Y R + W+ +Y R+ + A F G DG Y +
Sbjct: 495 TVEFDTMWSSLVNKYGLRDNMWLREIYEKREKWVPAYLRASFFGGIHVDGTFDPFYGTSL 554
Query: 470 NQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMERQAANSFTRKVFTKF 529
N T++ F +YE+ LE E E + DF++ P L+T P+E Q +T +F F
Sbjct: 555 NSLTSLREFISRYEQGLEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTIFRIF 614
Query: 530 QEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMRANCSCQMFEYSGIL 589
Q EL +++ Y +GAIS F V K +++ + VTF+ + A+CSCQMFEY G+L
Sbjct: 615 QSELAQSYNYLGLKTYEEGAISRFLVRKCGNENEKHAVTFSASNLNASCSCQMFEYEGLL 674
Query: 590 CRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHGQESLTMRYNNLCREAI 649
CRH PS YIL RWT+NA+ G D + + Q+ + +L A
Sbjct: 675 CRHILKVFNLLDIRELPSRYILHRWTKNAEFGFVRDVESG-VTSQDLKALMIWSLREAAS 733
Query: 650 KYSEDGAVAQETYNVAMSSIREG 672
KY E G + E Y +A +REG
Sbjct: 734 KYIEFGTSSLEKYKLAYEIMREG 756
Score = 198 (74.8 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 43 DDGIMDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGL 102
D G+ +PYVG+EF T + A+ +Y+ YA R GF + R R D + R FVC +EG
Sbjct: 23 DSGL-EPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF 81
Query: 103 KRRHGESCDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKVHYLRPRRHFAGTTKAEVYQ 162
+ C A +R++ + KWV+ + KEH+H + + PR A
Sbjct: 82 QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDLGGHIEEAQTTPRPSVQQRAPAPTKL 141
Query: 163 GVGI 166
G+ +
Sbjct: 142 GISV 145
Score = 172 (65.6 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 48 DPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHG 107
+PY G+EF++ + A FY YA VGF ++ R + D I R FVC +EG +
Sbjct: 189 EPYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHPSR 248
Query: 108 ESCDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSK 142
C A +RI+ + W+V + K+H+H + P K
Sbjct: 249 MGCGAYMRIKRQDSGGWIVDRLNKDHNHDL-EPGK 282
Score = 38 (18.4 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 169 SGIM-YVSMDGNRATVETNNHGA-RTATPVETRTAPPIESRTAPPVESR 215
SG+ YV ++ + A + + + T T + RT SRT V SR
Sbjct: 24 SGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSR 72
>TAIR|locus:2144930 [details] [associations]
symbol:FRS12 "FAR1-related sequence 12" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC068655
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00546450 RefSeq:NP_197397.1
UniGene:At.22319 UniGene:At.72702 PaxDb:Q3E7I5 PRIDE:Q3E7I5
EnsemblPlants:AT5G18960.1 GeneID:832014 KEGG:ath:AT5G18960
TAIR:At5g18960 eggNOG:NOG292373 HOGENOM:HOG000112649
InParanoid:Q3E7I5 OMA:GSANEAC PhylomeDB:Q3E7I5
ProtClustDB:CLSN2686747 Genevestigator:Q3E7I5 Uniprot:Q3E7I5
Length = 788
Score = 691 (248.3 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 165/442 (37%), Positives = 237/442 (53%)
Query: 249 RRRTLGRDAQNLL-DYFKKMQAENPGFFYAIQLDDDNRMA-NVFWADARSRTAYSHFGDA 306
R +G++ LL DYF+ Q E+ GFFYA++LD +N ++FWAD+R+R A S FGD+
Sbjct: 340 RENRIGKEWYPLLLDYFQSRQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDS 399
Query: 307 VTLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQP 366
V DT YR Y+VPFA G NHH Q +L GCA++ D+S+ +F+WLF+T+L AM+ +P
Sbjct: 400 VVFDTSYRKGSYSVPFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRP 459
Query: 367 VSITTDQDKAIQIAVAKVFPEVRHCISKWHVELYNCINLTETIEEFELSWNS-ILDKYDL 425
SI DQD IQ A+ +VFP H S W + NL EF+ + I +
Sbjct: 460 RSIVADQDLPIQQALVQVFPGAHHRYSAWQIREKERENLIPFPSEFKYEYEKCIYQTQTI 519
Query: 426 RGHD--W--LQSLYNARSQ-WV-PVYF-RDSF--------FAAISPNQGFDGSFFDGYVN 470
D W L + Y R W+ +Y R+++ F A P G FF ++
Sbjct: 520 VEFDSVWSALINKYGLRDDVWLREIYEQRENWVPAYLRASFFAGIPINGTIEPFFGASLD 579
Query: 471 QQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMERQAANSFTRKVFTKFQ 530
T + F +YE+ALE E E + DF++ P L+T P+E Q +T VF FQ
Sbjct: 580 ALTPLREFISRYEQALEQRREEERKEDFNSYNLQPFLQTKEPVEEQCRRLYTLTVFRIFQ 639
Query: 531 EELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMRANCSCQMFEYSGILC 590
ELV+++ Y +GAIS F V K ++S + VTF+ + ++CSCQMFE+ G+LC
Sbjct: 640 NELVQSYNYLCLKTYEEGAISRFLVRKCGNESEKHAVTFSASNLNSSCSCQMFEHEGLLC 699
Query: 591 RHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHGQESLTMRYNNLCREAIK 650
RH PS YIL RWT+NA+ G V + + + Q+ + +L A K
Sbjct: 700 RHILKVFNLLDIRELPSRYILHRWTKNAEFGF-VRDMESGVSAQDLKALMVWSLREAASK 758
Query: 651 YSEDGAVAQETYNVAMSSIREG 672
Y E G + E Y +A +REG
Sbjct: 759 YIEFGTSSLEKYKLAYEIMREG 780
Score = 204 (76.9 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 42 DDDGI--MDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGR 99
D++G ++PYVG+EF T + A+ FY+ YA R GF + R R D + R FVC +
Sbjct: 34 DEEGGSGVEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSK 93
Query: 100 EGLKRRHGESCDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKVHYLRPR 149
EG + C A +R++ + KWV+ + KEH+H + V PR
Sbjct: 94 EGFQLNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHELGGEGSVEETTPR 143
Score = 172 (65.6 bits), Expect = 2.8e-84, Sum P(2) = 2.8e-84
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 48 DPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHG 107
+PY G+EF + + A FY YA VGF ++ R + D I R FVC REG +
Sbjct: 210 EPYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHPSR 269
Query: 108 ESCDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSK 142
C A +RI+ + W+V + K+H+H + P K
Sbjct: 270 MGCGAYMRIKRQDSGGWIVDRLNKDHNHDL-EPGK 303
>TAIR|locus:2014639 [details] [associations]
symbol:FRS4 "FAR1-related sequence 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009978 EMBL:AC012394 HOGENOM:HOG000090708 InterPro:IPR018289
Pfam:PF10551 EMBL:BT010456 EMBL:AK221406 IPI:IPI00535818
IPI:IPI00657192 PIR:G96790 RefSeq:NP_001031286.1 RefSeq:NP_177759.1
UniGene:At.34672 PaxDb:Q6NQJ7 PRIDE:Q6NQJ7 GeneID:843965
KEGG:ath:AT1G76320 TAIR:At1g76320 eggNOG:NOG261993
InParanoid:Q9SGQ3 OMA:KIGCKAS ProtClustDB:CLSN2682748
Genevestigator:Q6NQJ7 Uniprot:Q6NQJ7
Length = 732
Score = 442 (160.7 bits), Expect = 2.3e-85, Sum P(3) = 2.3e-85
Identities = 93/278 (33%), Positives = 153/278 (55%)
Query: 398 ELYNCINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAAISPN 457
+L+ CI + + EEF+ W ++DK+ LR W++SLY R W P + R FA +S
Sbjct: 324 KLFKCIYRSWSEEEFDRRWLKLIDKFHLRDVPWMRSLYEERKFWAPTFMRGITFAGLSMR 383
Query: 458 QGFDG--SFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMER 515
+ S FD YV+ +T++ F Y LE+ +E E +ADFD P L++PSP E+
Sbjct: 384 CRSESVNSLFDRYVHPETSLKEFLEGYGLMLEDRYEEEAKADFDAWHEAPELKSPSPFEK 443
Query: 516 QAANSFTRKVFTKFQEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMR 575
Q ++ ++F +FQ E++ +G +T+ V F+D+ + Y+V ++ +
Sbjct: 444 QMLLVYSHEIFRRFQLEVLGAAACHLTKESEEG--TTYSVKDFDDEQK-YLVDWDEFKSD 500
Query: 576 ANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHGQE 635
CSC+ FEY G LCRH P +Y+L+RWT A+ + R EL +
Sbjct: 501 IYCSCRSFEYKGYLCRHAIVVLQMSGVFTIPINYVLQRWTNAARNRHQIS-RNLEL--VQ 557
Query: 636 SLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIREGW 673
S R+N+LCR AI E+G+++QE+Y++AM +++E +
Sbjct: 558 SNIRRFNDLCRRAIILGEEGSLSQESYDIAMFAMKEAF 595
Score = 369 (135.0 bits), Expect = 2.3e-85, Sum P(3) = 2.3e-85
Identities = 68/150 (45%), Positives = 94/150 (62%)
Query: 249 RRRTLGR-DAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAV 307
RR L DA+ LL++ +MQ ENP FF+A+ +D+ + NVFW DA+ Y F D V
Sbjct: 154 RRLVLDTGDAEILLEFLMRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVV 213
Query: 308 TLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPV 367
+ +T Y V +Y VP F G+NHH Q +L GC LL DD+ ++VWL +++L AM +P
Sbjct: 214 SFETSYFVSKYKVPLVLFVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPK 273
Query: 368 SITTDQDKAIQIAVAKVFPEVRHCISKWHV 397
+ TDQ+ AI+ A+A V PE RHC WHV
Sbjct: 274 VMLTDQNNAIKAAIAAVLPETRHCYCLWHV 303
Score = 157 (60.3 bits), Expect = 2.3e-85, Sum P(3) = 2.3e-85
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 53 MEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHGES--- 109
MEF T + A FY +YA+ VGF + R R + + +F C R G K++ ++
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINP 60
Query: 110 -------CDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKVHYLRPRRH 151
C A + ++ + KW V FVKEH+H ++ P + HY R R+
Sbjct: 61 RASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL-PEQAHYFRSHRN 108
>TAIR|locus:2090394 [details] [associations]
symbol:FHY3 "far-red elongated hypocotyls 3" species:3702
"Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
O-glycosyl compounds" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009585 "red, far-red light phototransduction" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010017 "red or far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042753 "positive regulation of circadian rhythm"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0008284 "positive regulation of cell
proliferation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009639 "response to red or far red light"
evidence=RCA] InterPro:IPR001000 InterPro:IPR006564
InterPro:IPR007527 PROSITE:PS50966 SMART:SM00575 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0046872 GO:GO:0005975 GO:GO:0007623
GO:GO:0004553 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0010218 GO:GO:0009585 GO:GO:0042753 HOGENOM:HOG000090708
InterPro:IPR018289 Pfam:PF10551 EMBL:AP001306 IPI:IPI00519965
RefSeq:NP_001118673.1 RefSeq:NP_188856.2 UniGene:At.27725
STRING:Q9LIE5 PaxDb:Q9LIE5 PRIDE:Q9LIE5 EnsemblPlants:AT3G22170.1
EnsemblPlants:AT3G22170.2 GeneID:821781 KEGG:ath:AT3G22170
TAIR:At3g22170 eggNOG:NOG45392 InParanoid:Q9LIE5 OMA:ITHAERV
PhylomeDB:Q9LIE5 ProtClustDB:PLN03097 Genevestigator:Q9LIE5
Uniprot:Q9LIE5
Length = 839
Score = 454 (164.9 bits), Expect = 7.1e-80, Sum P(3) = 7.1e-80
Identities = 93/273 (34%), Positives = 151/273 (55%)
Query: 402 CINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAAISPNQGFD 461
CI + E+F W L ++ L+ W+ SLY R +W P Y D A +S +Q D
Sbjct: 400 CIYKSGKDEDFARKWYKNLARFGLKDDQWMISLYEDRKKWAPTYMTDVLLAGMSTSQRAD 459
Query: 462 G--SFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMERQAAN 519
+FFD Y++++T++ F + Y+ L++ E E +AD + P +++PSP E+ +
Sbjct: 460 SINAFFDKYMHKKTSVQEFVKVYDTVLQDRCEEEAKADSEMWNKQPAMKSPSPFEKSVSE 519
Query: 520 SFTRKVFTKFQEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMRANCS 579
+T VF KFQ E++ + D STFRV FE++ + ++VT+N + +C
Sbjct: 520 VYTPAVFKKFQIEVLGAIACSPREENRDATCSTFRVQDFENN-QDFMVTWNQTKAEVSCI 578
Query: 580 CQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHGQESLTM 639
C++FEY G LCRH PS YILKRWT++AK+ + E ++ +
Sbjct: 579 CRLFEYKGYLCRHTLNVLQCCHLSSIPSQYILKRWTKDAKSR----HFSGEPQQLQTRLL 634
Query: 640 RYNNLCREAIKYSEDGAVAQETYNVAMSSIREG 672
RYN+LC A+K +E+ +++QE+YN+A +I EG
Sbjct: 635 RYNDLCERALKLNEEASLSQESYNIAFLAI-EG 666
Score = 352 (129.0 bits), Expect = 7.1e-80, Sum P(3) = 7.1e-80
Identities = 65/158 (41%), Positives = 97/158 (61%)
Query: 256 DAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAVTLDTRYRV 315
D + LLD+ +MQ+ N FFYA+ L DD R+ NVFW DA+SR Y F D V+LDT Y
Sbjct: 234 DFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVSLDTTYVR 293
Query: 316 YQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPVSITTDQDK 375
+Y +P A F G+N H Q ++ GCAL+ D+S A++ WL +T+L A+ P + T+ D
Sbjct: 294 NKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIGGQAPKVLITELDV 353
Query: 376 AIQIAVAKVFPEVRHCISKWHVELYNCINLTETIEEFE 413
+ V ++FP RHC+ WHV + NL + +++ +
Sbjct: 354 VMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHD 391
Score = 115 (45.5 bits), Expect = 7.1e-80, Sum P(3) = 7.1e-80
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 47 MDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRH 106
++P GMEF + A +FY EY+R +GF++ + + R + + +F C R G KR +
Sbjct: 68 LEPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREY 127
Query: 107 GES 109
+S
Sbjct: 128 DKS 130
Score = 93 (37.8 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 81 FSRPRPDEPIVFREFVCGREGLKRRHGESCDAMLRIELKGQNKWVVTKFVKEHSHPMVSP 140
F+RPR + E + GR + C A + ++ + KWV+ FV+EH+H ++ P
Sbjct: 131 FNRPRARQSKQDPENMAGRRTCAKT---DCKASMHVKRRPDGKWVIHSFVREHNHELL-P 186
Query: 141 SKVHYLRPRRHFAGTTK--AEVYQGVGIVPSGIMYVSMDGNRATVETNN 187
++ + R+ +A K AE Y+ V + S G +VET +
Sbjct: 187 AQAVSEQTRKIYAAMAKQFAE-YKTVISLKSDSKSSFEKGRTLSVETGD 234
>TAIR|locus:2016259 [details] [associations]
symbol:FRS8 "FAR1-related sequence 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC009322 EMBL:AC011717 InterPro:IPR018289 Pfam:PF10551
HOGENOM:HOG000112651 IPI:IPI00534750 PIR:E96831 RefSeq:NP_178118.2
UniGene:At.52575 PRIDE:Q9S793 EnsemblPlants:AT1G80010.1
GeneID:844341 KEGG:ath:AT1G80010 TAIR:At1g80010 eggNOG:NOG311954
InParanoid:Q9S793 OMA:FAIRVKS Genevestigator:Q9S793 Uniprot:Q9S793
Length = 725
Score = 374 (136.7 bits), Expect = 2.5e-67, Sum P(3) = 2.5e-67
Identities = 85/246 (34%), Positives = 128/246 (52%)
Query: 174 VSMDGNRATVETNNHGARTATPVETRTAPPIESRTAPP--VESRTAP---PIESRTAPPV 228
V +D N + H +++ + +P ++ PP V+ RT + T P +
Sbjct: 184 VKLDHNHSFDPQRAHNSKSHKKSSSSASPATKTNPEPPPHVQVRTIKLYRTLALDTPPAL 243
Query: 229 ESNRAVKNTGALNYVVRPANRRRTLGRDAQNLLDYFKKMQAENPGFFYAIQLDDDNRMAN 288
++ + T L+ ++RR L + L D+F ++Q +P F Y + L DD + N
Sbjct: 244 GTSLSSGETSDLSLDHFQSSRRLELRGGFRALQDFFFQIQLSSPNFLYLMDLADDGSLRN 303
Query: 289 VFWADARSRTAYSHFGDAVTLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLLDDSEA 348
VFW DAR+R AYSHFGD + DT Y +P F GINHHG IL GC LL D S
Sbjct: 304 VFWIDARARAAYSHFGDVLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFE 363
Query: 349 SFVWLFKTFLTAMNDCQPVSITTDQDKAIQIAVAKVFPEVRHCISKWHVELYNCINLTET 408
++VWLF+ +LT M P T+Q KA++ AV++VFP H +S HV L+N
Sbjct: 364 TYVWLFRAWLTCMLGRPPQIFITEQCKAMRTAVSEVFPRAHHRLSLTHV-LHNICQSVVQ 422
Query: 409 IEEFEL 414
+++ +L
Sbjct: 423 LQDSDL 428
Score = 319 (117.4 bits), Expect = 2.5e-67, Sum P(3) = 2.5e-67
Identities = 78/281 (27%), Positives = 139/281 (49%)
Query: 399 LYNCINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFA-AIS-P 456
+Y C+ +EEFE +W ++ ++ + ++ ++ ++ R W PVY +D+F A A++ P
Sbjct: 437 VYGCLK----VEEFETAWEEMIIRFGMTNNETIRDMFQDRELWAPVYLKDTFLAGALTFP 492
Query: 457 NQGFDGSF-FDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMER 515
F F GYV++ T++ F YE L+ + RE D +++ P+L+T P E
Sbjct: 493 LGNVAAPFIFSGYVHENTSLREFLEGYESFLDKKYTREALCDSESLKLIPKLKTTHPYES 552
Query: 516 QAANSFTRKVFTKFQEEL-VETFVYTANGIESDGAISTFRVAKFEDDS-RAYIVTFNHP- 572
Q A FT ++F +FQ+E+ + + + S+G+ S++ V + E D R + V +
Sbjct: 553 QMAKVFTMEIFRRFQDEVSAMSSCFGVTQVHSNGSASSYVVKEREGDKVRDFEVIYETSA 612
Query: 573 --EMRANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAE 630
++R C C F ++G CRH P YIL+RW ++ K + V E +
Sbjct: 613 AAQVRCFCVCGGFSFNGYQCRHVLLLLSHNGLQEVPPQYILQRWRKDVKR-LYVAEFGSG 671
Query: 631 LHGQESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIRE 671
+ Y +L R A++ E G ++E A + RE
Sbjct: 672 RVDIMNPDQWYEHLHRRAMQVVEQGMRSKEHCRAAWEAFRE 712
Score = 114 (45.2 bits), Expect = 2.5e-67, Sum P(3) = 2.5e-67
Identities = 32/105 (30%), Positives = 48/105 (45%)
Query: 49 PYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREG---LKRR 105
P GMEF + D A +FY+ YAR +GF+ +V R + C +G LK
Sbjct: 95 PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFKLLKDA 154
Query: 106 HGE------SCDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKVH 144
H C AM+R+ L ++W V + +H+H P + H
Sbjct: 155 HSRRKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSF-DPQRAH 198
>TAIR|locus:2035144 [details] [associations]
symbol:FRS6 "FAR1-related sequence 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC008016 InterPro:IPR018289 Pfam:PF10551 EMBL:AY080775
EMBL:AY133776 IPI:IPI00532825 PIR:G96565 RefSeq:NP_175661.1
UniGene:At.37583 PRIDE:Q9SSQ4 EnsemblPlants:AT1G52520.1
GeneID:841683 KEGG:ath:AT1G52520 TAIR:At1g52520 eggNOG:NOG287780
HOGENOM:HOG000112651 InParanoid:Q9SSQ4 OMA:LELMCCK PhylomeDB:Q9SSQ4
ProtClustDB:CLSN2679731 Genevestigator:Q9SSQ4 Uniprot:Q9SSQ4
Length = 703
Score = 340 (124.7 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 84/279 (30%), Positives = 139/279 (49%)
Query: 407 ETIE--EFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAAIS---PNQGFD 461
ET++ EFE +W ++ + + ++WL+SLY R++W PVY +D+FFA I+ P +
Sbjct: 414 ETLKVVEFEAAWGFMVHNFGVIENEWLRSLYEERAKWAPVYLKDTFFAGIAAAHPGETLK 473
Query: 462 GSFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDT-ICTTPRLRTPSPMERQAANS 520
FF+ YV++QT + F +YE AL+ E +D ++ T L+T E Q +
Sbjct: 474 -PFFERYVHKQTPLKEFLDKYELALQKKHREETLSDIESQTLNTAELKTKCSFETQLSRI 532
Query: 521 FTRKVFTKFQEELVETF-VYTANGIESDGAISTFRVA-KFEDDS-----RAYIVTFNHPE 573
+TR +F KFQ E+ E + ++ + DG F V + +S R + V +N
Sbjct: 533 YTRDMFKKFQIEVEEMYSCFSTTQVHVDGPFVIFLVKERVRGESSRREIRDFEVLYNRSV 592
Query: 574 MRANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDER-TAELH 632
C C F + G LCRH P YIL RW ++ K D T +
Sbjct: 593 GEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPLRYILPRWRKDYKRLHFADNGLTGFVD 652
Query: 633 GQESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIRE 671
G + + ++ L + +++ E+GAV+ + Y VAM ++E
Sbjct: 653 GTDRVQW-FDQLYKNSLQVVEEGAVSLDHYKVAMQVLQE 690
Score = 302 (111.4 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 53/142 (37%), Positives = 87/142 (61%)
Query: 256 DAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAVTLDTRYRV 315
D+ + +YF +MQ NP FFY + ++D+ ++ NVFWADA S+ + S+FGD + +D+ Y
Sbjct: 247 DSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYIS 306
Query: 316 YQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPVSITTDQDK 375
++ +P FTG+NHHG+ L C L ++ S+ WL K +L+ M P +I TD+ K
Sbjct: 307 GKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKR-SPQTIVTDRCK 365
Query: 376 AIQIAVAKVFPEVRHCISKWHV 397
++ A+++VFP S H+
Sbjct: 366 PLEAAISQVFPRSHQRFSLTHI 387
Score = 101 (40.6 bits), Expect = 2.7e-60, Sum P(3) = 2.7e-60
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 49 PYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHGE 108
P VGMEF + D A +Y+ YA VGF +V + R + C +G KR +
Sbjct: 85 PAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFKRINDV 144
Query: 109 S---------CDAMLRIELKGQNKWVVTKFVKEHSH 135
+ C AM+R+ +W V + +H+H
Sbjct: 145 NRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNH 180
>TAIR|locus:2129665 [details] [associations]
symbol:FAR1 "FAR-RED IMPAIRED RESPONSE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=IMP] [GO:0010017 "red or far-red
light signaling pathway" evidence=IMP] [GO:0010018 "far-red light
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0010218 "response
to far red light" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA;IDA] [GO:0042753
"positive regulation of circadian rhythm" evidence=IMP] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010212
"response to ionizing radiation" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0048522
"positive regulation of cellular process" evidence=RCA]
InterPro:IPR006564 InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966
SMART:SM00575 INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 EMBL:AL161540 EMBL:Z97337 GO:GO:0010018
GO:GO:0042753 PIR:F71414 PIR:T02124 EMBL:AF159587 IPI:IPI00546816
RefSeq:NP_567455.4 UniGene:At.11570 IntAct:Q9SWG3 STRING:Q9SWG3
PaxDb:Q9SWG3 PRIDE:Q9SWG3 EnsemblPlants:AT4G15090.1 GeneID:827173
KEGG:ath:AT4G15090 TAIR:At4g15090 eggNOG:NOG306101
HOGENOM:HOG000090708 InParanoid:Q9SWG3 OMA:LNLMEPP PhylomeDB:Q9SWG3
ProtClustDB:CLSN2716659 Genevestigator:Q9SWG3 InterPro:IPR018289
Pfam:PF10551 Uniprot:Q9SWG3
Length = 827
Score = 501 (181.4 bits), Expect = 7.5e-58, Sum P(2) = 7.5e-58
Identities = 116/388 (29%), Positives = 196/388 (50%)
Query: 381 VAKVFPEVRHCISKWHVEL---YN-CINLTETIEEFELSWNSILDKYDLRGHDWLQSLYN 436
V + PE + K H +N CI + T +EF++ W ++ ++ L +WL L+
Sbjct: 366 VLEKIPEYFSHVMKRHENFLLKFNKCIFRSWTDDEFDMRWWKMVSQFGLENDEWLLWLHE 425
Query: 437 ARSQWVPVYFRDSFFAAISPNQGFDG--SFFDGYVNQQTTIPMFFRQYERALENSFEREI 494
R +WVP + D F A +S +Q + SFFD Y++++ T+ F RQY L+N +E E
Sbjct: 426 HRQKWVPTFMSDVFLAGMSTSQRSESVNSFFDKYIHKKITLKEFLRQYGVILQNRYEEES 485
Query: 495 EADFDTICTTPRLRTPSPMERQAANSFTRKVFTKFQEELVETFVYTANGIESDGAISTFR 554
ADFDT P L++PSP E+Q A ++T +F KFQ E++ + D ++TFR
Sbjct: 486 VADFDTCHKQPALKSPSPWEKQMATTYTHTIFKKFQVEVLGVVACHPRKEKEDENMATFR 545
Query: 555 VAKFEDDSRAYIVTFNHPEMRANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRW 614
V E D ++VT++ + C C+MFEY G LCRH P YILKRW
Sbjct: 546 VQDCEKDDD-FLVTWSKTKSELCCFCRMFEYKGFLCRHALMILQMCGFASIPPQYILKRW 604
Query: 615 TRNAKTGIGVDERTAELHGQESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIREGWX 674
T++AK+G+ E ++ ++ RYN+LC A + SE+G V++E YN+A+ ++ E
Sbjct: 605 TKDAKSGVLAGEGADQI---QTRVQRYNDLCSRATELSEEGCVSEENYNIALRTLVETLK 661
Query: 675 XXXXXXXXXXXXPPPGSHVS-GTGYDDRKISAS-PSDSTPLLWPRQDEMTRRFNLNDSGP 732
S ++ GT ++ ++ A + ++ ++ + +S
Sbjct: 662 NCVDMNNARNNITESNSQLNNGTHEEENQVMAGVKATKKKTVYRKRKGQQEASQMLESQQ 721
Query: 733 AIQPVSDLNLPRMAPVSLHRDDGPSDNM 760
++QP+ ++ M ++ GP N+
Sbjct: 722 SLQPMETISSEAM---DMNGYYGPQQNV 746
Score = 407 (148.3 bits), Expect = 9.1e-47, Sum P(2) = 9.1e-47
Identities = 82/198 (41%), Positives = 119/198 (60%)
Query: 256 DAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAVTLDTRYRV 315
D+Q LL+YFK+++ ENP FFYAI L++D R+ N+FWADA+SR Y F D V+ DT Y
Sbjct: 225 DSQVLLEYFKRIKKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVSFDTTYVK 284
Query: 316 YQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPVSITTDQDK 375
+ +P A F G+NHH Q +L GCAL+ D+S +FVWL KT+L AM P I TDQDK
Sbjct: 285 FNDKLPLALFIGVNHHSQPMLLGCALVADESMETFVWLIKTWLRAMGGRAPKVILTDQDK 344
Query: 376 AIQIAVAKVFPEVRHCISKWHV-----ELYNCINLTETIEEFELSWNSIL------DKYD 424
+ AV+++ P RHC + WHV E ++ ++ + E F L +N + D++D
Sbjct: 345 FLMSAVSELLPNTRHCFALWHVLEKIPEYFS--HVMKRHENFLLKFNKCIFRSWTDDEFD 402
Query: 425 LRGHDWLQSLYNARSQWV 442
+R + +W+
Sbjct: 403 MRWWKMVSQFGLENDEWL 420
Score = 162 (62.1 bits), Expect = 7.5e-58, Sum P(2) = 7.5e-58
Identities = 46/174 (26%), Positives = 86/174 (49%)
Query: 41 GDDDGIMDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGRE 100
GD D ++P G++F T +AA FY EYA+ +GF++ + + R + + + +F C R
Sbjct: 45 GDLD--LEPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRY 102
Query: 101 GL---KRRHGES----------CDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKVHYLR 147
G+ G S C A + ++ + KW++ +FVK+H+H ++ P+ ++ R
Sbjct: 103 GVTPESESSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL-PALAYHFR 161
Query: 148 PRRH--FAGTTKAEVYQGVGIVPSGIMYVSMDGNRATVETNNHGARTATPVETR 199
+R+ A ++ V + MYV M +R + N G+ T V ++
Sbjct: 162 IQRNVKLAEKNNIDILHAVS-ERTKKMYVEM--SRQSGGYKNIGSLLQTDVSSQ 212
>TAIR|locus:2012828 [details] [associations]
symbol:FRS11 "FAR1-related sequence 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:AC005489 InterPro:IPR018289 Pfam:PF10551 HOGENOM:HOG000006468
ProtClustDB:CLSN2687754 EMBL:AF424595 EMBL:BT000486 IPI:IPI00517858
RefSeq:NP_563865.1 UniGene:At.26302 IntAct:Q9SY66 PaxDb:Q9SY66
PRIDE:Q9SY66 EnsemblPlants:AT1G10240.1 GeneID:837563
KEGG:ath:AT1G10240 TAIR:At1g10240 eggNOG:NOG258635
InParanoid:Q9SY66 OMA:IRRHRTE PhylomeDB:Q9SY66
Genevestigator:Q9SY66 Uniprot:Q9SY66
Length = 680
Score = 279 (103.3 bits), Expect = 9.4e-44, Sum P(3) = 9.4e-44
Identities = 78/281 (27%), Positives = 123/281 (43%)
Query: 395 WHVELYNCINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAA- 453
W E Y +L E++EEFEL W +++ + L + + +LY +RS W Y R F A
Sbjct: 387 WKAEFYRLYHL-ESVEEFELGWRDMVNSFGLHTNRHINNLYASRSLWSLPYLRSHFLAGM 445
Query: 454 -ISPNQGFDGSFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSP 512
++ +F +++ QT + F Q ++ + + L+T +P
Sbjct: 446 TLTGRSKAINAFIQRFLSAQTRLAHFVEQVAVVVDFKDQATEQQTMQQNLQNISLKTGAP 505
Query: 513 MERQAANSFTRKVFTKFQEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHP 572
ME AA+ T F+K QE+LV Y + + D K + + Y V
Sbjct: 506 MESHAASVLTPFAFSKLQEQLVLAAHYAS--FQMDEGYLVRHHTKLDGGRKVYWVP---Q 560
Query: 573 EMRANCSCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELH 632
E +CSCQ+FE+SG LCRH P Y+ RW R + + AE H
Sbjct: 561 EGIISCSCQLFEFSGFLCRHALRVLSTGNCFQVPDRYLPLRWRRISTSFSKTFRSNAEDH 620
Query: 633 GQ--ESLTMRYNNLCREAIKYSEDGAVAQETYNVAMSSIRE 671
G+ + L + L E+ K E +A E ++ +S IRE
Sbjct: 621 GERVQLLQNLVSTLVSESAKSKERLDIATEQTSILLSRIRE 661
Score = 228 (85.3 bits), Expect = 9.4e-44, Sum P(3) = 9.4e-44
Identities = 67/234 (28%), Positives = 105/234 (44%)
Query: 180 RATVETNNHGARTATPVETRTAPPIESRTAPPVESRTAPPIESRTAPPVESNRAVKNTGA 239
R T N+H P + R P S + +SR + S+T V+ +
Sbjct: 142 RVTGFANHHNHELLEPNQVRFLPAYRS-ISDADKSRIL--MFSKTGISVQQMMRLLE--- 195
Query: 240 LNYVVRPANRRRTLGRDAQNLLDYFKKMQAEN----------------PGFFYAIQLDDD 283
L V P T +D +NLL FKK+ E+ P F + LD +
Sbjct: 196 LEKCVEPGFLPFT-EKDVRNLLQSFKKLDPEDENIDFLRMCQSIKEKDPNFKFEFTLDAN 254
Query: 284 NRMANVFWADARSRTAYSHFGDAVTLDTRYRVYQYNVPFAPFTGINHHGQMILFGCALLL 343
+++ N+ W+ A S +Y FGDAV DT +R+ +P + G+N++G FGC LL
Sbjct: 255 DKLENIAWSYASSIQSYELFGDAVVFDTTHRLSAVEMPLGIWVGVNNYGVPCFFGCVLLR 314
Query: 344 DDSEASFVWLFKTFLTAMNDCQPVSITTDQDKAIQIAVAKVFPEVRHCISKWHV 397
D++ S+ W + F MN P +I TD + ++ A+A P +H + W V
Sbjct: 315 DENLRSWSWALQAFTGFMNGKAPQTILTDHNMCLKEAIAGEMPATKHALCIWMV 368
Score = 87 (35.7 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 22/68 (32%), Positives = 33/68 (48%)
Query: 98 GREGLKRRHGE-SCDAMLRI----ELKGQNKWVVTKFVKEHSHPMVSPSKVHYLRPRRHF 152
G+ RR C A LRI EL G +W VT F H+H ++ P++V +L R
Sbjct: 111 GKPQRNRRSSRCGCQAYLRISKLTEL-GSTEWRVTGFANHHNHELLEPNQVRFLPAYRSI 169
Query: 153 AGTTKAEV 160
+ K+ +
Sbjct: 170 SDADKSRI 177
Score = 83 (34.3 bits), Expect = 9.4e-44, Sum P(3) = 9.4e-44
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 49 PYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPD--EPIVFREFVCGREG 101
PY+G F T D A FY +A+R GFS + H + + + + R FVC R G
Sbjct: 48 PYLGQIFLTHDTAYEFYSTFAKRCGFSIRR-HRTEGKDGVGKGLTRRYFVCHRAG 101
>TAIR|locus:2062606 [details] [associations]
symbol:FRS2 "FAR1-related sequence 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC005700
HOGENOM:HOG000090708 InterPro:IPR018289 Pfam:PF10551 EMBL:AK228730
EMBL:AK221503 IPI:IPI00520357 IPI:IPI00530517 PIR:G84730
RefSeq:NP_001077991.1 RefSeq:NP_001118431.1 RefSeq:NP_180784.2
RefSeq:NP_973580.1 UniGene:At.13189 UniGene:At.67147
EnsemblPlants:AT2G32250.1 EnsemblPlants:AT2G32250.3 GeneID:817785
KEGG:ath:AT2G32250 TAIR:At2g32250 eggNOG:NOG304016
InParanoid:Q3EBQ3 OMA:CKHAILV PhylomeDB:Q3EBQ3
ProtClustDB:CLSN2681190 Genevestigator:Q3EBQ3 Uniprot:Q3EBQ3
Length = 807
Score = 373 (136.4 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 81/273 (29%), Positives = 133/273 (48%)
Query: 401 NCINLTETIEEFELSWNSILDKYDLRGHDWLQSLYNARSQWVPVYFRDSFFAAIS-PNQ- 458
NC+ + T E FE W++++ K++L ++W+Q L+ R +WVP YF A +S P +
Sbjct: 334 NCVASSWTDEHFERRWSNMIGKFELNENEWVQLLFRDRKKWVPHYFHGICLAGLSGPERS 393
Query: 459 GFDGSFFDGYVNQQTTIPMFFRQYERALENSFEREIEADFDTICTTPRLRTPSPMERQAA 518
G S FD Y+N + T FF Y + L+ + E + D + P LR+ E+Q +
Sbjct: 394 GSIASHFDKYMNSEATFKDFFELYMKFLQYRCDVEAKDDLEYQSKQPTLRSSLAFEKQLS 453
Query: 519 NSFTRKVFTKFQEELVETFVYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMRANC 578
+T F KFQ E+ DG + FR+ FE+ + V N+ + A C
Sbjct: 454 LIYTDAAFKKFQAEVPGVVSCQLQKEREDGTTAIFRIEDFEERQN-FFVALNNELLDACC 512
Query: 579 SCQMFEYSGILCRHXXXXXXXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHGQESLT 638
SC +FEY G LC+H PS YILKRW++ +++ A + + +
Sbjct: 513 SCHLFEYQGFLCKHAILVLQSADVSRVPSQYILKRWSKKGNNKEDKNDKCATIDNRMA-- 570
Query: 639 MRYNNLCREAIKYSEDGAVAQETYNVAMSSIRE 671
R+++LCR +K +++ E A+ + E
Sbjct: 571 -RFDDLCRRFVKLGVVASLSDEACKTALKLLEE 602
Score = 370 (135.3 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 77/204 (37%), Positives = 118/204 (57%)
Query: 256 DAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAVTLDTRYRV 315
D + LL++F +MQ + PGFFYA+ D D R+ NVFW DA+++ Y F D V DT Y
Sbjct: 169 DLKLLLEHFMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFYVR 228
Query: 316 YQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPVSITTDQDK 375
Y +PFAPF G++HH Q +L GCAL+ + SE+++ WLF+T+L A+ P + TDQDK
Sbjct: 229 NGYRIPFAPFIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDK 288
Query: 376 AIQIAVAKVFPEVRHCISKWHV--ELYNCIN--LTET---IEEF----ELSWNSILDKYD 424
+ V +VFP+VRH W V ++ +N +++ +E F SW + ++
Sbjct: 289 LLSDIVVEVFPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTD--EHFE 346
Query: 425 LRGHDWLQSLYNARSQWVPVYFRD 448
R + + ++WV + FRD
Sbjct: 347 RRWSNMIGKFELNENEWVQLLFRD 370
Score = 137 (53.3 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 33/94 (35%), Positives = 46/94 (48%)
Query: 52 GMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKRRHGES-- 109
GM+F +++AA FY EYAR VGF + R + + + C R G KR +
Sbjct: 41 GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKATAIN 100
Query: 110 --------CDAMLRIELKGQNKWVVTKFVKEHSH 135
C A L ++ K KWV+ FVKEH+H
Sbjct: 101 PRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNH 134
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 240 LNYVVRPANRRRTLGRDAQNLLDY----FKKMQAENPG 273
L Y + R +L + Q L Y FKK QAE PG
Sbjct: 433 LEYQSKQPTLRSSLAFEKQLSLIYTDAAFKKFQAEVPG 470
Score = 38 (18.4 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 801 ELEVKFQLSKVTLEPMLRSMAYISDQLS 828
++E K L + +P LRS QLS
Sbjct: 426 DVEAKDDLEYQSKQPTLRSSLAFEKQLS 453
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 374 DKAIQIAVAKVFPEVRHCIS 393
D+A + A+ + V+HC+S
Sbjct: 590 DEACKTALKLLEETVKHCVS 609
>TAIR|locus:2182778 [details] [associations]
symbol:FRS10 "FAR1-related sequence 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009639 "response
to red or far red light" evidence=ISS] InterPro:IPR006564
InterPro:IPR007527 Pfam:PF04434 PROSITE:PS50966 SMART:SM00575
INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AF262043
InterPro:IPR018289 Pfam:PF10551 IPI:IPI00525509 RefSeq:NP_198205.2
UniGene:At.55070 PaxDb:Q9LKR4 EnsemblPlants:AT5G28530.1
GeneID:832948 KEGG:ath:AT5G28530 TAIR:At5g28530 eggNOG:NOG320567
HOGENOM:HOG000006468 OMA:DECAQAF PhylomeDB:Q9LKR4
ProtClustDB:CLSN2687754 Genevestigator:Q9LKR4 Uniprot:Q9LKR4
Length = 685
Score = 288 (106.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 98/399 (24%), Positives = 158/399 (39%)
Query: 256 DAQNLLDYFKKMQAENPGFFYAIQLDDDNRMANVFWADARSRTAYSHFGDAVTLDTRYRV 315
D LL+ K + + F Y D++ ++ N+ WA S YS FGD V DT YR
Sbjct: 242 DTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFGDVVVFDTSYRS 301
Query: 316 YQYNVPFAPFTGINHHGQMILFGCALLLDDSEASFVWLFKTFLTAMNDCQPVSITTDQDK 375
Y + F GI+++G+ +L GC LL D+S SF W +TF+ M P +I TD D
Sbjct: 302 VPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGRHPQTILTDIDT 361
Query: 376 AIQIAVAKVFPEVRHCISKWHV--ELYNCINLT--ETIEEFELSWNSILDKYDLRGHDWL 431
++ A+ + P H + H+ +L + + T EEF ++ + ++ +
Sbjct: 362 GLKDAIGREMPNTNHVVFMSHIVSKLASWFSQTLGSHYEEFRAGFDMLCRAGNVDEFEQQ 421
Query: 432 QSLYNARSQWVP------VYFRDSFFAAISPNQGFDGSFFDGYVNQQTTIPMFFRQY--- 482
L R VP +Y + + + F N +I F ++
Sbjct: 422 WDLLVTRFGLVPDRHAALLYSCRASWLPCCIREHFVAQTMTSEFN--LSIDSFLKRVVDG 479
Query: 483 ----ERALENSFEREIEADFDTICTTPRLRTPSPMERQAANSFTRKVFTKFQEELVET-F 537
+ LE S + A PR PS R + T + +++
Sbjct: 480 ATCMQLLLEESALQVSAAASLAKQILPRFTYPSLKTCMPMEDHARGILTPYAFSVLQNEM 539
Query: 538 VYTANGIESDGAISTFRVAKFEDDSRAYIVTFNHPEMRANCSCQMFEYSGILCRHXXXXX 597
V + ++ A F V ++ V +N CSC+ FE+SGILCRH
Sbjct: 540 VLSVQYAVAEMANGPFIVHHYKKMEGECCVIWNPENEEIQCSCKEFEHSGILCRHTLRVL 599
Query: 598 XXXXXXXXPSHYILKRWTRNAKTGIGVDERTAELHGQES 636
P Y L RW R + + + + G +S
Sbjct: 600 TVKNCFHIPEQYFLLRW-RQESPHVATENQNGQGIGDDS 637
Score = 117 (46.2 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 44 DGIMDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLK 103
D + PYVG F T+D A +Y +AR+ GFS + S + + R+FVC R G
Sbjct: 50 DTVFTPYVGQIFTTDDEAFEYYSTFARKSGFSIRKAR-STESQNLGVYRRDFVCYRSGFN 108
Query: 104 R----------RHGES----CDAMLRIE---LKGQNKWVVTKFVKEHSHPMVSPSKVHYL 146
+ R +S CD L + + G + W V++F H+H ++ +V L
Sbjct: 109 QPRKKANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLL 168
>TAIR|locus:2041041 [details] [associations]
symbol:AT2G43280 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] [GO:0006301 "postreplication repair"
evidence=RCA] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002685
EMBL:BT002891 EMBL:BT004409 IPI:IPI00532233 RefSeq:NP_181857.2
UniGene:At.36909 EnsemblPlants:AT2G43280.1 GeneID:818930
KEGG:ath:AT2G43280 TAIR:At2g43280 HOGENOM:HOG000090425
InParanoid:Q84J94 OMA:PREARHT PhylomeDB:Q84J94
ProtClustDB:CLSN2680222 Genevestigator:Q84J94 Uniprot:Q84J94
Length = 206
Score = 214 (80.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 47/118 (39%), Positives = 68/118 (57%)
Query: 43 DDGIMDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREG- 101
DD ++P G+ F +EDAAK FYD+Y+RR+GF +V R D I+ R F C +EG
Sbjct: 16 DDFAIEPREGIIFESEDAAKMFYDDYSRRLGFVMRVMSCRRSEKDGRILARRFGCNKEGH 75
Query: 102 ---LKRRHG----------ESCDAMLRIELKGQNKWVVTKFVKEHSHPMV-SPSKVHY 145
++ + G E C AM+ ++ KWV+TKFVKEH+HP+V SP + +
Sbjct: 76 CVSIRGKFGSVRKPRPSTREGCKAMIHVKYDRSGKWVITKFVKEHNHPLVVSPREARH 133
>TAIR|locus:2079651 [details] [associations]
symbol:AT3G07500 "AT3G07500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002686
GenomeReviews:BA000014_GR HOGENOM:HOG000090425 EMBL:BT004031
EMBL:BT005083 IPI:IPI00525865 RefSeq:NP_187406.2 UniGene:At.48631
UniGene:At.71201 IntAct:Q84JA7 PRIDE:Q84JA7
EnsemblPlants:AT3G07500.1 GeneID:819938 KEGG:ath:AT3G07500
TAIR:At3g07500 eggNOG:NOG320386 InParanoid:Q84JA7 OMA:ERRRCTA
PhylomeDB:Q84JA7 ProtClustDB:CLSN2690766 Genevestigator:Q84JA7
Uniprot:Q84JA7
Length = 217
Score = 208 (78.3 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 44/111 (39%), Positives = 68/111 (61%)
Query: 46 IMDPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLKR- 104
+++P++GMEF +E+AAK+FYD YA +GF +V F R D +V+R VC +EG +R
Sbjct: 30 MVEPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRS 89
Query: 105 --RHGES----------CDAMLRIELKGQNKWVVTKFVKEHSHPMV--SPS 141
R ES C A++ ++ + W+VTKF KEH+HP++ SP+
Sbjct: 90 RPRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPN 140
>TAIR|locus:2097543 [details] [associations]
symbol:AT3G59470 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009639 "response to red or
far red light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101
EMBL:CP002686 EMBL:AY058089 EMBL:AY143081 IPI:IPI00519802
RefSeq:NP_001190136.1 RefSeq:NP_567085.1 UniGene:At.26657
IntAct:Q93Z68 PaxDb:Q93Z68 PRIDE:Q93Z68 EnsemblPlants:AT3G59470.1
EnsemblPlants:AT3G59470.2 GeneID:825116 KEGG:ath:AT3G59470
TAIR:At3g59470 eggNOG:NOG330011 InParanoid:Q93Z68 OMA:VENHNEM
PhylomeDB:Q93Z68 ProtClustDB:CLSN2689239 Genevestigator:Q93Z68
Uniprot:Q93Z68
Length = 251
Score = 202 (76.2 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 45/108 (41%), Positives = 63/108 (58%)
Query: 48 DPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGLK---- 103
+PYVG EF +E AA FY+ YA +VGF +V SR R D + R+ VC +EG +
Sbjct: 69 EPYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSK 128
Query: 104 -----RRHGES---CDAMLRIELKGQNKWVVTKFVKEHSHPMVSPSKV 143
R+ E+ C AM+ I + KWV+TKFVKEH+H ++ P +V
Sbjct: 129 RDKVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM-PGRV 175
>TAIR|locus:2135738 [details] [associations]
symbol:AT4G12850 "AT4G12850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009639 "response to red or far red
light" evidence=ISS] INTERPRO:IPR004330 Pfam:PF03101 EMBL:CP002687
EMBL:AL049640 EMBL:AL161535 HOGENOM:HOG000090425 IPI:IPI00545761
PIR:T06643 RefSeq:NP_193021.1 UniGene:At.33440 DNASU:826897
EnsemblPlants:AT4G12850.1 GeneID:826897 KEGG:ath:AT4G12850
TAIR:At4g12850 InParanoid:Q9SU01 OMA:EEIECQD PhylomeDB:Q9SU01
ProtClustDB:CLSN2916026 ArrayExpress:Q9SU01 Genevestigator:Q9SU01
Uniprot:Q9SU01
Length = 183
Score = 167 (63.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 48 DPYVGMEFHTEDAAKTFYDEYARRVGFSSKVCHFSRPRPDEPIVFREFVCGREGL---KR 104
+PYVG++F +E+ AK FY EY++R+GF ++ R D + R C ++G +
Sbjct: 9 EPYVGLKFESEEEAKDFYVEYSKRLGFVVRMMQRRRSGIDGRTLARRLGCNKQGFGPNNQ 68
Query: 105 RHG-------ESCDAMLRIELKGQNKWVVTKFVKEHSHPM 137
R E C A + ++++ KWVVT+F+KEH+H +
Sbjct: 69 RSSSSSSSSREGCKATILVKMEKSGKWVVTRFIKEHNHSL 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 841 792 0.00096 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 629 (67 KB)
Total size of DFA: 432 KB (2207 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.27u 0.11s 66.38t Elapsed: 00:00:03
Total cpu time: 66.27u 0.11s 66.38t Elapsed: 00:00:03
Start: Fri May 10 11:35:31 2013 End: Fri May 10 11:35:34 2013