BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043654
(390 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 204/353 (57%), Gaps = 19/353 (5%)
Query: 27 QNCSSVSCRRDEPWIRFPFRITTRQPESCGYPGFNVSCDSSSSQTILELP-SGKFSLQAI 85
Q CSS SC RD+ +RFPF + ++QPE CG+ GFN+ C ++S +T L+LP SG F ++ I
Sbjct: 24 QQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQC-TASPKTALKLPNSGTFLVREI 82
Query: 86 DYDAQQIWINDQSNCLPQKILSLNLSGSPFKALYNQQFTFFNCSSSYLQ-YRLNPIGCLS 144
DY +QQI + D NCL +K+L+ ++S SPF ALY +TF +C + + R + I CL
Sbjct: 83 DYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSCPNEVAKSSRFDSIPCLG 142
Query: 145 GANFTIFATSSTRVVNNFIQSSSCRFVARVQVPVDWPFYDQV--VSSDLSD-NLRLTWDE 201
+ + AT+S + + + SC+ V + VPV + S+D++D +L L WD
Sbjct: 143 NSTTSFLATTSLDLAKSML--PSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDS 200
Query: 202 PQCGDCEKGGGRCGFKNNSSTEIGCLSLH---HREIPKAARIAIMVGAGVPTMLCLLGLA 258
P C DCE+ RCGF++N+S ++ C + P+ +I ++ G T+
Sbjct: 201 PSCSDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQVLKIILLSIIGPLTIFA----T 256
Query: 259 CIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVIAGLDGPTIESYPKIVLGESRRLP- 317
CI S + N P + V GLD IESY K LGESRRLP
Sbjct: 257 CIAVGVCTSERFASLIQRNVAIAALQPN---EVIVTTGLDESIIESYKKTELGESRRLPG 313
Query: 318 KPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPA 370
DD CPICL+EY KET++ IPEC HCFH++C+D WL+++ +CP+CRNSP+
Sbjct: 314 NNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPS 366
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 234 bits (598), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 135/335 (40%), Positives = 191/335 (57%), Gaps = 23/335 (6%)
Query: 41 IRFPFRITTRQPESCGYPGFNVSCDSSSSQTILELP-SGKFSLQAIDYDAQQIWINDQSN 99
IRFPF C +P FN+ C ++ + T+L+LP SG F +Q IDY QQI+IND N
Sbjct: 46 IRFPF---------CDHPLFNLLC-TNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPEN 95
Query: 100 CLPQKILSLNLSGSPFKALYNQQFTFFNCSSSYLQYRLNP-IGCLSGANFTIFATSSTRV 158
CL +++L+ N+SGSPF ++ +TF C + + P I CLS + + FATS+ +
Sbjct: 96 CLAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWYPSIPCLSNSTSSFFATSNFAL 155
Query: 159 VNNFIQSSSCRFVARVQVPVDWPFYDQVVSSDLSDNLRLTWDEPQCGDCEKGGGRCGFKN 218
+ + SC+ V R+ VP D PF + SS L+ +L L W+ P C CE RCGFKN
Sbjct: 156 AESML--PSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKN 213
Query: 219 NSSTEIGCLSLHHREIPKAARIAIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSNY 278
+S E+ C A +A+++ + + +L + CI N+P RR ++
Sbjct: 214 KASPEVKCFGAKKSGHLSRAVVAVLICLSIIGAV-ILFVTCIAIRIHNTP-----RRRHW 267
Query: 279 NFPEFNPTVAPQPTVIA---GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKE 335
P TV QP + GLD TIE Y + LGESRR P + CPICL+EY KE
Sbjct: 268 AVPAAAATVMQQPREVMATRGLDQSTIEKYKTMELGESRRPPGTNGIVCPICLSEYVSKE 327
Query: 336 TLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPA 370
T++ IPEC HCFHA C+D WL+++ +CP+CRNS A
Sbjct: 328 TVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNSRA 362
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 196/358 (54%), Gaps = 25/358 (6%)
Query: 29 CSSVSCRRDEPWIRFPFRITTRQPESCGYPGFNVSCDSSSSQTILELPSGK-FSLQAIDY 87
C S SC ++ RFPF + + QPESCGY GFN+ C ++ T L+LP + F ++ IDY
Sbjct: 29 CYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDDAN-TTLKLPKSEPFLVKEIDY 87
Query: 88 DAQQIWINDQSNCLPQKILSLNLSGSPFKALYNQQFTFFNC-SSSYLQYRLNPIGCLSGA 146
+ Q+I +ND NCL +++L+ + SGSPF L ++ +TF C + + I CL
Sbjct: 88 ETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANITASFRAIDCLGNT 147
Query: 147 NFTIFATSSTRVVNNFIQSSSCRFVARVQVPVDWPF-YDQVVSSDLSDNLRLTWDEPQCG 205
+ F + N SSC + +P W Y S ++ L WD P C
Sbjct: 148 TSSFFV---VQFENLGSMPSSCHIFKILPLPFSWFVAYTTYPDGQNSRDMWLKWDSPDCR 204
Query: 206 DCE-KGGGRCGFKNNSSTEIGCLS-----LHHREIPKAARIAIMVGAGVPTMLCL-LGLA 258
DCE + RCGFKNN+S ++ C S LH+ + + +I + G T L +GL
Sbjct: 205 DCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGL-QVLKIMCLSLVGPLTALTFCVGL- 262
Query: 259 CIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQPT---VIAGLDGPTIESYPKIVLGESRR 315
++C S + + + +V QP+ GLD TIESY K+ LGESRR
Sbjct: 263 -VMC----SSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESRR 317
Query: 316 LPK-PDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARL 372
LP +D CPICL+EY KET++ +PEC HCFH +C+D WL+L+++CPVCR++P+ L
Sbjct: 318 LPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSPL 375
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 201 bits (511), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 167/305 (54%), Gaps = 22/305 (7%)
Query: 77 SGKFSLQAIDYDAQQIWINDQSNCLPQKILSLNLSGSPFKALYNQQFTFFNCSSSYL--Q 134
SG F + I+Y QQI I+D NC+ +++L+ N SGSPF ++ +TF C + +
Sbjct: 2 SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPV 61
Query: 135 YRLNPIGCLSGANFTIFATSSTRVVNNFIQSSSCRFVARVQVPVDWPFYDQVVSSD---- 190
+ L I CLS + + FATS+ + + + SC+ V + VPVD + D +
Sbjct: 62 WSLMSIPCLSNSTSSFFATSN--LTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFST 119
Query: 191 --LSDNLRLTWDEPQCGDCEKGGGRCGFKNNSSTEIGCLSLHHREIPKAARIAIMVGAGV 248
N+ L W P C CEK RCGFKN +S E+ L+ E R I+
Sbjct: 120 VPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEVKYLADPPDETKSRLRPLIIT---- 175
Query: 249 PTMLCLLG---LACIICAKL-NSPDTRRRRRSNYNFPEFNPTVAPQPTVIA-GLDGPTIE 303
LC++G CI ++ NS +RR N N T P+ V+ GLD TIE
Sbjct: 176 ---LCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVVVTTGLDQSTIE 232
Query: 304 SYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCP 363
SY K+ LGESRRLP + CPICL+EY KET++ +PEC HCFH C+DEWL+++++CP
Sbjct: 233 SYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCP 292
Query: 364 VCRNS 368
VCRNS
Sbjct: 293 VCRNS 297
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 184/339 (54%), Gaps = 27/339 (7%)
Query: 41 IRFPFRITTRQPESCGYPGFNVSCDSSSSQTILELP-SGKFSLQAIDYDAQQIWINDQSN 99
IRFPF C + FN+ C + ++T+LELP SG F ++ IDY Q+I+IND N
Sbjct: 46 IRFPF---------CNHARFNLHC-TDLNKTVLELPMSGTFLVRDIDYRRQKIYINDP-N 94
Query: 100 CLPQKILSLNLSGSPFKALYNQQFTFFNCSSSYLQYRLNP-IGCLSGANFTIFATSSTRV 158
CL +++L+ N+SGSPF ++ +TF +C + + P I CLS + + FATS+ +
Sbjct: 95 CLAKRLLTFNISGSPFSPHFDILYTFLSCPNEVVLPSWYPSIPCLSNSTSSFFATSNYSL 154
Query: 159 VNNFIQSSSCRFVARVQVPVDWPFYDQVVSSDLSD-NLRLTWDEPQC-GDCEKGGGRCGF 216
+ + S C+ V R+ VP PF + SSDL++ +L L W P C C + G
Sbjct: 155 AQSMLPS--CQIVKRLHVPATSPFGETRFSSDLNNQSLLLEWALPDCRAKCLGATKKTGT 212
Query: 217 KNNSSTEIGCLSLHH--REIPKAARIAIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRR 274
NS+ S + RE+ ++ V V ++ + C + D+ R
Sbjct: 213 IYNSNIFSCSFSFLYDSRELFINGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSER-- 270
Query: 275 RSNYNFPEFNPTVAPQPTVIA---GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEY 331
++ TV QP + GLD TIE++ K+ LGESRRL + CPICL+EY
Sbjct: 271 ---FDSAIAAATVMQQPREVMARRGLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEY 327
Query: 332 KPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPA 370
KET++ IPEC HCFH +C+D WL+++ +CP+CRNS A
Sbjct: 328 ASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCRNSCA 366
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
Query: 241 AIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVIAGLDGP 300
I + + ++ + LA IC + S T R ++ + +P V GLD P
Sbjct: 16 GIAIAVSILVLISFIMLASYIC--IRSKSTGRDEATSDVVLDLP---SPAAEVKLGLDRP 70
Query: 301 TIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNA 360
IESYP+IVLG+SRRLP+P++ C ICL +Y+ +E ++ IPEC HCFH DCVDEWLR +A
Sbjct: 71 VIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSA 130
Query: 361 TCPVCRNSPA 370
TCP+CRNSPA
Sbjct: 131 TCPLCRNSPA 140
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 293 VIAGLDGPTIESYPKIVLGESRRLPKPD------DNTCPICLAEYKPKETLKTIPECTHC 346
V+ GLD I SYPK + D D TC ICL EYK E L+ +PEC H
Sbjct: 101 VVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHY 160
Query: 347 FHADCVDEWLRLNATCPVCRNSPARLP 373
FH C+D WL+LN +CPVCRNSP P
Sbjct: 161 FHLCCLDAWLKLNGSCPVCRNSPLPTP 187
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 292 TVIAGLDGPTIESYPK---------IVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPE 342
V+ GLD I SYPK +V G+ + + TC ICL EY +E L+ +PE
Sbjct: 95 VVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPE 154
Query: 343 CTHCFHADCVDEWLRLNATCPVCRNSPARLP 373
C H FH C+D WL+LN +CPVCRNSP P
Sbjct: 155 CKHYFHVYCLDAWLKLNGSCPVCRNSPLPTP 185
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEW 355
GLD TI+SYPKI+ E++ + C ICL +YK K L+ +P+C H FH C+D W
Sbjct: 121 GLDEDTIQSYPKILYSEAKG--PTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTW 178
Query: 356 LRLNATCPVCRNSPARLP 373
LRLN TCPVCR SP P
Sbjct: 179 LRLNPTCPVCRTSPLPTP 196
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 294 IAGLDGPTIESYPKIVLGESR---RLPKPDDNT--CPICLAEYKPKETLKTIPECTHCFH 348
+ GL I+ +PK+ E+R L K T C ICLA+YK + ++ +P+C H FH
Sbjct: 94 VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFH 153
Query: 349 ADCVDEWLRLNATCPVCRNSPARLPPLPAAAAAAD 383
+CVD WLRL+ TCPVCR SP P PA AD
Sbjct: 154 DNCVDPWLRLHPTCPVCRTSPL---PSPAMTPVAD 185
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 296 GLDGPTIESYPKIVLGESRRL-PKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GLD I+S+P V E+R + P + C +CL E+K ETL+ +P C H FHADCVD
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 355 WLRLNATCPVCR 366
WL ++TCP+CR
Sbjct: 116 WLSHSSTCPICR 127
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 292 TVIAGLDGPTIESYPKIVLGE--SRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHA 349
TV GLD TIE++P V E ++++ K C ICL E++ ETL+ +P+C H FH
Sbjct: 91 TVARGLDAETIETFPTFVYSEVKTQKIGK-GALECAICLNEFEDDETLRLLPKCDHVFHP 149
Query: 350 DCVDEWLRLNATCPVCRNSPARLPPLPAAAAAAD 383
C+ WL+ + TCPVCR + A P P D
Sbjct: 150 HCIGAWLQGHVTCPVCRTNLAEQTPEPEVVVETD 183
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 292 TVIAGLDGPTIESYPKIVLGESRRLPKPDDN-TCPICLAEYKPKETLKTIPECTHCFHAD 350
T GLD IE++P + L + CP+CL E++ ETL+ IP+C H FH
Sbjct: 85 TTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPG 144
Query: 351 CVDEWLRLNATCPVCRNSPARLPPLPAAAAAAD 383
C+D WLR TCP+CR A L P+P + +++
Sbjct: 145 CIDAWLRSQTTCPLCR---ANLVPVPGESVSSE 174
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDNT-CPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GL+ IES+P + E + L C ICL+E++ +ETL+ +P C+H FHA+C+D
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 355 WLRLNATCPVCR 366
WL +TCPVCR
Sbjct: 154 WLSSWSTCPVCR 165
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 236 KAARIAIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQP---- 291
KA+ + ++V + + ++GLA + C + S R Y+ NP
Sbjct: 9 KASDLTLLVITIILFAIFIVGLASV-CFRWTS-------RQFYSQESINPFTDSDVESRT 60
Query: 292 --TVIAGLDGPTIESYPKIVLGESR-RLPKPDDNTCPICLAEYKPKETLKTIPECTHCFH 348
T + GLD I S+P + E + R C +C+ E++ ETL+ +PEC H FH
Sbjct: 61 SITAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFH 120
Query: 349 ADCVDEWLRLNATCPVCR 366
ADCV WL ++TCP+CR
Sbjct: 121 ADCVSVWLSDHSTCPLCR 138
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 238 ARIAIMVGAGVPTMLCLLGLACIICAKLNSPDT-RRRRRSNYNFPEFNPTVAPQP-TVIA 295
A I I+ A + + + C C + D RRRRRS+ + NP + P V
Sbjct: 47 AVIGILATAFLLVSYYIFVIKC--CLNWHQIDIFRRRRRSS----DQNPLMIYSPHEVNR 100
Query: 296 GLDGPTIESYP-------KIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFH 348
GLD I + P +V GE + + C +CL E++ E L+ IP C H FH
Sbjct: 101 GLDESAIRAIPVFKFKKRDVVAGEEDQ--SKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 349 ADCVDEWLRLNATCPVCRNS 368
DC+D WL+ NA CP+CR S
Sbjct: 159 IDCIDIWLQGNANCPLCRTS 178
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 244 VGAGVPTMLCLLGLACII---CAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVIAGLDGP 300
V A + T+ L GL + CA+ N PD+ R F + GLD
Sbjct: 49 VFAVLVTLFFLTGLLSVYIRHCARSN-PDSSTR--------YFRNRANDGSSRRGGLDNA 99
Query: 301 TIESYPKIV---LGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLR 357
+ES+P + ES+ K D C ICL E + ET++ +P C H FH DC+D WL
Sbjct: 100 VVESFPVFAYSSVKESKIGSK--DLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLY 157
Query: 358 LNATCPVCRNSPARLPPLPAAAAAADDDDD 387
+ATCPVCR++ L A + D+DD
Sbjct: 158 SHATCPVCRSN------LTAKSNKPGDEDD 181
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDNT-CPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GL+ +ES+P + E + L C ICL+E+ KETL+ +P C+H FHA+C+D
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 355 WLRLNATCPVCRNS----PARLPPLPAA-AAAADDDDDDHA 390
WL +TCP CR + P P P ++ D+H+
Sbjct: 154 WLSSQSTCPACRANLSLKPGESYPYPITDLETGNEQRDEHS 194
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 293 VIAGLDGPTIESYPKIVLGESRRLPKPDDNT-CPICLAEYKPKETLKTIPECTHCFHADC 351
V G+D IES+P + E + + C ICL E++ +E L+ +P C+H FHA+C
Sbjct: 88 VRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANC 147
Query: 352 VDEWLRLNATCPVCR 366
+DEWL +TCPVCR
Sbjct: 148 IDEWLSSRSTCPVCR 162
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 274 RRSNYNFPE---FNPTVAPQPTVIA--------GLDGPTIESYPKIVLGESR--RLPKPD 320
RRSN F F T A + + GLD IE++P + E + R+ K
Sbjct: 73 RRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAEAIETFPTFLYSEVKAVRIGK-G 131
Query: 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCR 366
C +CL E++ ETL+ +P C H FHADCVD WL ++TCP+CR
Sbjct: 132 GVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCR 177
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 27/165 (16%)
Query: 221 STEIGCLSLHHREIPKAARIAI---MVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSN 277
S+ L+L +++ P ++ I +V +G+ ++ LG+ +I L R+S+
Sbjct: 97 SSSAATLTLMNQKDPSSSSIVSVLCLVISGLALIIVFLGVLYLIFKFL--------RKSS 148
Query: 278 YNFP----EFNPTV----APQPTVI-----AGLDGPTIESYPKIVLGE-SRRLPKPDDNT 323
FP +NP + +PQ + +GLD I++ P + G + L +P D
Sbjct: 149 TLFPIPHFNYNPDLFSFSSPQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFD-- 206
Query: 324 CPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNS 368
C +CL E+ + L+ +P C+H FH C+D WL N+TCP+CR S
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRS 251
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 228 SLHHREIPKAA--RIAIMVGAGVPTMLCLLGLACII---CAKLNSPDTRRRRRSNYNFPE 282
S HHR ++V + T LL + ++ CA+ +P R R + + P
Sbjct: 32 SKHHRSATAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPV 91
Query: 283 FNPTVAPQPTVIAGLDGPTIESYPKIVLGE--SRRLPKPDDNTCPICLAEYKPKETLKTI 340
GLD +E++P V G+ +R K C +CLAE+ + L+ +
Sbjct: 92 GGAAA--ASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVL 149
Query: 341 PECTHCFHADCVDEWLRLNATCPVCRNSPARLPPLPAAAAAADD 384
P C H FH DC+D WL TCP+CR + PP+ AAA + D
Sbjct: 150 PACCHVFHPDCIDPWLAAAVTCPLCRAN-LTAPPVSLAAAESSD 192
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 241 AIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVIAGLDGP 300
A+++ + T+L + LAC +C K +T S+ + VA GL
Sbjct: 47 AVIIAMLMFTLLFSM-LACCVCYKYT--NTSPHGTSSDTEEGGHGEVAFTRRTSRGLGKD 103
Query: 301 TIESYPKIVLGESRRLPKPDDNT-CPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLN 359
I S+P + + + L C ICL E++ +ETL+ +P C+H FHA C+D WL
Sbjct: 104 VINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSR 163
Query: 360 ATCPVCRNSPARLPPLPAA 378
+TCPVCR A LPP P +
Sbjct: 164 STCPVCR---ASLPPKPGS 179
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDN-TCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GLD IE++P + L + C +CL E++ ETL+ IP+C H FH C+D
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 355 WLRLNATCPVCRNSPARLPPLPAAAAAA 382
WLR + TCP+CR A L P+P + +
Sbjct: 175 WLRSHTTCPLCR---ADLIPVPGESIVS 199
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 295 AGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
+G+D IES P G D C +CLA ++P E L+ +P+C H FH +CVD
Sbjct: 119 SGIDRSVIESLPVFRFGALS--GHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDT 176
Query: 355 WLRLNATCPVCR 366
WL ++TCP+CR
Sbjct: 177 WLDAHSTCPLCR 188
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 295 AGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
+GLD I++ P + E + +P D C +CL E+ + L+ +P C+H FH DC+D
Sbjct: 117 SGLDQALIDALPVFLYKEIKGTKEPFD--CAVCLCEFSEDDKLRLLPNCSHAFHIDCIDT 174
Query: 355 WLRLNATCPVCRNS 368
WL N+TCP+CR +
Sbjct: 175 WLLSNSTCPLCRGT 188
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 292 TVIAGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADC 351
T+ GL E P +V ES + D+ C +CL +Y+P + L+ IP C H FH DC
Sbjct: 71 TIELGLSKELREMLPIVVFKESFTV---MDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDC 127
Query: 352 VDEWLRLNATCPVCRNSPARLPPLPAAAAAADDD 385
+D WL + TCP+C RL +P+ + + DD
Sbjct: 128 IDLWLTSHTTCPLC-----RLALIPSRSRQSQDD 156
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEW 355
GL G ++ PK+ + ++ P+ +C +CL +++ ET++++P C H FH C+D+W
Sbjct: 152 GLTGDSLNRIPKVRITDT----SPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKW 207
Query: 356 LRLNATCPVCRN 367
LR +A+CP+CR
Sbjct: 208 LRRHASCPLCRR 219
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 294 IAGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVD 353
+GLD IES P + L + + C +CL++++ E L+ +P+C H FH C+D
Sbjct: 96 FSGLDKKAIESLPFFRFSALKGLKQGLE--CSVCLSKFEDVEILRLLPKCRHAFHIGCID 153
Query: 354 EWLRLNATCPVCRN 367
+WL +ATCP+CRN
Sbjct: 154 QWLEQHATCPLCRN 167
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 273 RRRSNYN-----FPEFNPTVAPQPTVIAGLDGPTIESYPKIVLGESRRLPKPDDNTCPIC 327
RR SN N F PT T GL E P ++ ES + +D C +C
Sbjct: 44 RRNSNTNVDWSSLGGFVPTNNNLSTAELGLSKDIREMLPIVIYKESFTV---NDTQCSVC 100
Query: 328 LAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARLPPLPAA 378
L +Y+ +E L+ +P C H FH +C+D WL + TCP+CR S L P P+
Sbjct: 101 LGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLS---LIPKPSV 148
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 296 GLDGPTIESYPKIVLGE--SRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVD 353
GLD +E++P + + +++L K + C ICL E++ ETL+ +P+C H FH C+D
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLGK-GELECAICLNEFEDDETLRLLPKCDHVFHPHCID 157
Query: 354 EWLRLNATCPVCR 366
WL + TCPVCR
Sbjct: 158 AWLEAHVTCPVCR 170
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 283 FNPTVAPQPTVIAGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPE 342
FN + A +GLD IES P + + D C +CL++++ E L+ +P+
Sbjct: 85 FNRSTASSDR-FSGLDKTAIESLPLFRFSALKGSKQGLD--CSVCLSKFESVEILRLLPK 141
Query: 343 CTHCFHADCVDEWLRLNATCPVCRN 367
C H FH C+D+WL +ATCP+CR+
Sbjct: 142 CRHAFHIGCIDQWLEQHATCPLCRD 166
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 284 NPTVAPQPTVIA-GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPE 342
+P+ A V + GLD I+S P + D C +CL+E++ ET + +P
Sbjct: 81 DPSTAATSVVASRGLDPNVIKSLPVFTFSDET---HKDPIECAVCLSEFEESETGRVLPN 137
Query: 343 CTHCFHADCVDEWLRLNATCPVCRNSPARLPPLPAAAAAADDD 385
C H FH DC+D W ++TCP+CR+ L + + AAA + +
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAARERE 180
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 19/136 (13%)
Query: 240 IAIMVGAGVPTMLCLLGLACII-CAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVIA--- 295
+ +++ A + ++C+LGL + C L RR + + T +PQP V A
Sbjct: 30 LVVILAALLCALICVLGLIAVSRCVWL------RRLAAGNRTVSGSQTQSPQPPVAAANK 83
Query: 296 GLDGPTIESYPKIVLG----ESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADC 351
GL ++S PK+ ES + + C ICLAE+ + L+ +P+C H FH C
Sbjct: 84 GLKKKVLQSLPKLTFSPESPESEKFAE-----CAICLAEFSAGDELRVLPQCGHGFHVAC 138
Query: 352 VDEWLRLNATCPVCRN 367
+D WL +++CP CR
Sbjct: 139 IDTWLGSHSSCPSCRQ 154
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEW 355
GLD + S P + + K + C ICL++++ ET+K IP C H FH DCVD W
Sbjct: 115 GLDSQAVRSLP---VYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTW 171
Query: 356 LRLNATCPVCRNS 368
L TCP+CR++
Sbjct: 172 LSSYVTCPLCRSN 184
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 296 GLDGPTIESYPKIVL-GESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GL G +E PK+ + G + + ++C +CL +++ ET++++P C H FH C+D
Sbjct: 167 GLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 226
Query: 355 WLRLNATCPVCR 366
WL + +CP+CR
Sbjct: 227 WLLRHGSCPMCR 238
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 287 VAPQPTVIAGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHC 346
V+P+ + LD I + + +RR + C +CL++++P++ L+ +P C H
Sbjct: 84 VSPETERSSVLDSLPIFKFSSV----TRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHA 139
Query: 347 FHADCVDEWLRLNATCPVCRN 367
FHADC+D WL N TCP+CR+
Sbjct: 140 FHADCIDIWLVSNQTCPLCRS 160
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 280 FPEFNPTVAPQPTVIAGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKT 339
F + + +V QP GLD I S P V+G + + C +CL+ + K+ +
Sbjct: 60 FQDLSFSVVSQPPK-RGLDSLVIASLPTFVVGIKNDVAGTE---CAVCLSLLEEKDNARM 115
Query: 340 IPECTHCFHADCVDEWLRLNATCPVCRN----SPARLPPLPAAAAAAD 383
+P C H FH CVD WL +TCPVCR S RL P P D
Sbjct: 116 LPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGD 163
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 296 GLDGPTIESYPKI-VLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GL G ++ PKI + G++ + ++C +CL +++ ET++++P C H FH C+D
Sbjct: 162 GLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDN 221
Query: 355 WLRLNATCPVCR 366
WL + +CP+CR
Sbjct: 222 WLFRHGSCPMCR 233
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 283 FNPTVAPQPTVIAGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPE 342
F PT T GL E P ++ ES + D+ C +CL +Y+ +E L+ +P
Sbjct: 73 FVPTNNNLSTAELGLSKDIREMLPVVIYKESFIVK---DSQCSVCLGDYQAEEKLQQMPS 129
Query: 343 CTHCFHADCVDEWLRLNATCPVCRNSPARLPPLPAAAAAAD 383
C H FH +C+D WL + TCP+CR S P L + + +
Sbjct: 130 CGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSLDLSHQSTE 170
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 237 AARIAIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSNYNFPEFNPTVAP-QPTVIA 295
+ + +++ + ++C LGL II L RR + + E P+++ + +
Sbjct: 55 SGNVMMLLSILICGIICCLGLHYIIRCAL-------RRSTRFMISEPVPSLSSTRGSSNK 107
Query: 296 GLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEW 355
G+ + +P + LP D+ C ICL+++ E L+ +P+C H FH C+D+W
Sbjct: 108 GIKKKALRMFPVVSYSPEMNLPGLDEE-CVICLSDFVSGEQLRLLPKCNHGFHVRCIDKW 166
Query: 356 LRLNATCPVCRN 367
L+ + TCP CRN
Sbjct: 167 LQQHLTCPKCRN 178
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 324 CPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCR 366
C +CL+E++ +E L+ IP C+H FH DC+D WL+ NA CP+CR
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 295 AGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
AGLD I+ L + + K + C ICL E+ E+L+ +P+C H FH C+D
Sbjct: 126 AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDR 185
Query: 355 WLRLNATCPVCR 366
WL+ ++ CP+CR
Sbjct: 186 WLKSHSNCPLCR 197
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 295 AGLDGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354
GLD I S+P V S K C ICL+E+ ++T++ I C H FH++C+D
Sbjct: 76 TGLDPFIIRSFP--VFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDL 133
Query: 355 WLRLNATCPVCR 366
W L+ TCPVCR
Sbjct: 134 WFELHKTCPVCR 145
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 295 AGLDGPTIESYP----KIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHAD 350
A +D I++ P K ++G + D + C +CL E+ ++ L+ +P+C+H FH +
Sbjct: 94 AEIDQSFIDALPLLHYKTMIG-----LRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVE 148
Query: 351 CVDEWLRLNATCPVCRNS 368
C+D WL N+TCP+CR++
Sbjct: 149 CIDTWLLTNSTCPLCRDN 166
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 36/45 (80%)
Query: 324 CPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNS 368
CP+CL E++ ++ L+ +P+C+H FH +C+D WL ++TCP+CR++
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSN 170
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARLPPLPAAAA 380
D+ C +CL E++ KE L +P C H FH DC+ WL + TCP+CR+S + ++
Sbjct: 102 DSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSI-----SSTK 156
Query: 381 AADDDDDDH 389
+ DDD+DH
Sbjct: 157 TSVDDDNDH 165
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 257 LACIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVI-------AGLDGPTIESYPKIV 309
L ++ + P RSN FPE + + A Q + +GLD I++ P
Sbjct: 62 LHLLVRFLIKHPSATASSRSN-RFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFH 120
Query: 310 LGE----------SRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLN 359
E + +P D C +CL E+ K+ L+ +P C+H FH +C+D WL+ N
Sbjct: 121 YKEIVGSAGGGGGNGAAQEPFD--CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSN 178
Query: 360 ATCPVCRNS 368
+TCP+CR +
Sbjct: 179 STCPLCRGT 187
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 238 ARIAIMVGAGVPTMLCLLGLACIICAKLNSPDTRRRRRSNYNFPEFNPTVAPQPTVIAGL 297
A + +++ + ++C LGL II L R SN E P G+
Sbjct: 54 ANVVMVLSVLLCALVCSLGLNSIIRCAL--------RCSNLVPSEAGGDNYPVRLTNTGV 105
Query: 298 DGPTIESYPKIVLGESRRLPKPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLR 357
++S+ + LP D C ICL+E+ +E +K +P C H FH C+D+WL
Sbjct: 106 KRKALKSFQTVSYSTELNLPGLDTE-CAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLS 164
Query: 358 LNATCPVCRN 367
+++CP CR+
Sbjct: 165 SHSSCPTCRH 174
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCR 366
D + C +CL+E++ E+L+ +P+C H FH C+D WL+ ++ CP+CR
Sbjct: 138 DGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,313,918
Number of Sequences: 539616
Number of extensions: 6468163
Number of successful extensions: 14950
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 14479
Number of HSP's gapped (non-prelim): 501
length of query: 390
length of database: 191,569,459
effective HSP length: 119
effective length of query: 271
effective length of database: 127,355,155
effective search space: 34513247005
effective search space used: 34513247005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)