Query 043654
Match_columns 390
No_of_seqs 320 out of 2338
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 11:54:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043654.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043654hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyma_ g.44.1.1 (A:) EL5 RING 99.7 2.5E-18 1.8E-22 117.8 4.1 52 319-370 3-54 (55)
2 d1chca_ g.44.1.1 (A:) Immediat 99.5 2.7E-15 1.9E-19 107.5 4.8 50 320-372 4-53 (68)
3 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.5 8.1E-15 5.9E-19 98.9 2.3 49 322-371 1-51 (52)
4 d3dplr1 g.44.1.1 (R:19-106) RI 99.4 5.4E-14 3.9E-18 105.9 5.3 50 320-370 20-84 (88)
5 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.4 1.9E-13 1.4E-17 96.6 5.1 53 320-373 2-57 (65)
6 d1v87a_ g.44.1.1 (A:) Deltex p 99.4 2.8E-13 2E-17 107.2 5.6 54 319-373 23-96 (114)
7 d1fbva4 g.44.1.1 (A:356-434) C 99.3 6E-13 4.4E-17 97.8 5.4 50 321-374 23-73 (79)
8 d2baya1 g.44.1.2 (A:1-56) Pre- 99.3 4.5E-13 3.3E-17 91.7 2.0 50 323-375 2-51 (56)
9 d1bora_ g.44.1.1 (A:) Acute pr 99.2 2.1E-12 1.5E-16 88.0 2.0 50 320-376 5-54 (56)
10 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.1 1.6E-11 1.2E-15 91.0 3.9 49 321-373 23-72 (86)
11 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.1 4.2E-11 3E-15 92.6 4.6 49 321-373 21-72 (103)
12 d1vyxa_ g.44.1.3 (A:) IE1B pro 99.0 7.3E-11 5.3E-15 81.7 4.3 49 319-370 4-58 (60)
13 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.9 2.1E-10 1.5E-14 87.5 2.3 49 321-374 22-70 (97)
14 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.8 1E-09 7.6E-14 80.0 4.4 54 319-376 6-60 (78)
15 d2c2la2 g.44.1.2 (A:225-304) S 98.8 1.1E-09 8E-14 80.3 4.3 52 319-374 5-57 (80)
16 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.6 1.2E-08 8.7E-13 77.5 5.3 54 320-376 21-74 (98)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.4 3.3E-08 2.4E-12 74.4 2.9 48 319-367 3-58 (94)
18 d1weoa_ g.44.1.1 (A:) Cellulos 95.3 0.042 3E-06 38.2 7.6 67 318-384 13-83 (93)
19 d1f62a_ g.50.1.2 (A:) Williams 91.2 0.043 3.1E-06 34.8 1.9 44 323-367 2-49 (51)
20 d1we9a_ g.50.1.2 (A:) PHD fing 90.9 0.034 2.5E-06 37.1 1.2 50 319-368 4-58 (64)
21 d1wila_ g.50.1.3 (A:) Hypothet 83.6 0.48 3.5E-05 32.5 3.5 36 318-355 12-47 (89)
22 d1fp0a1 g.50.1.2 (A:19-88) Nuc 82.8 0.35 2.5E-05 32.5 2.6 46 320-369 6-55 (70)
23 d1rutx3 g.39.1.3 (X:83-113) LI 81.9 0.24 1.8E-05 27.5 1.1 29 322-352 3-31 (31)
24 d1mm2a_ g.50.1.2 (A:) Mi2-beta 80.8 0.16 1.2E-05 33.2 0.2 46 320-369 8-57 (61)
25 d1wepa_ g.50.1.2 (A:) PHD fing 80.0 2.7 0.00019 28.6 6.6 47 322-369 13-64 (79)
26 d1weva_ g.50.1.2 (A:) PHD fing 76.4 0.31 2.2E-05 34.4 0.5 51 321-371 16-75 (88)
27 d1y02a2 g.50.1.1 (A:20-70) Rif 69.4 0.35 2.6E-05 30.4 -0.5 44 323-366 2-45 (51)
28 d1wesa_ g.50.1.2 (A:) PHD Inhi 68.0 1.6 0.00012 29.2 2.7 44 321-368 16-65 (71)
29 d1wema_ g.50.1.2 (A:) Death as 65.8 3.5 0.00025 27.5 4.2 46 321-368 16-70 (76)
30 d2cs3a1 g.44.1.3 (A:8-87) Prot 63.2 13 0.00095 24.3 6.3 39 320-358 7-45 (80)
31 d1wewa_ g.50.1.2 (A:) Sumoylat 62.2 3.7 0.00027 27.7 3.8 49 320-369 15-73 (78)
32 d1weea_ g.50.1.2 (A:) PHD fing 61.8 0.81 5.9E-05 30.7 0.1 46 322-368 17-66 (72)
33 d1z60a1 g.49.1.2 (A:328-386) T 57.9 3.2 0.00023 26.4 2.5 43 321-365 15-58 (59)
34 d2co8a2 g.39.1.3 (A:8-43) Nedd 55.0 3.1 0.00023 23.7 1.9 32 318-352 5-36 (36)
35 d2dloa1 g.39.1.3 (A:8-42) Thyr 54.4 1.1 8.1E-05 25.4 -0.2 28 321-352 8-35 (35)
36 d1joca1 g.50.1.1 (A:1348-1411) 54.3 4.2 0.00031 26.3 2.8 35 320-354 7-41 (64)
37 d1dvpa2 g.50.1.1 (A:149-220) H 53.8 4 0.00029 27.1 2.6 34 321-354 13-46 (72)
38 d1zbdb_ g.50.1.1 (B:) Effector 51.0 5.7 0.00042 29.3 3.4 35 318-352 45-80 (124)
39 d1vfya_ g.50.1.1 (A:) vps27p p 46.1 7.1 0.00052 25.4 2.9 35 321-355 5-39 (67)
40 d1g47a1 g.39.1.3 (A:1-35) Pinc 40.6 7.4 0.00054 21.5 1.8 30 320-351 6-35 (35)
41 d1b8ta3 g.39.1.3 (A:101-143) C 40.3 4.4 0.00032 24.1 0.9 30 320-352 14-43 (43)
42 d1yuza2 g.41.5.1 (A:167-202) N 38.2 9.6 0.0007 21.6 2.2 27 335-368 3-29 (36)
43 d2d8ya1 g.39.1.3 (A:9-43) Epli 36.9 10 0.00076 21.2 2.2 30 320-352 6-35 (35)
44 d2o35a1 a.293.1.1 (A:2-80) Hyp 36.6 6.4 0.00047 26.3 1.4 12 346-357 39-50 (79)
45 d2gmga1 a.4.5.82 (A:1-105) Hyp 35.9 5.4 0.00039 28.5 1.0 27 342-373 72-98 (105)
46 d2jnea1 g.41.18.1 (A:1-71) Hyp 34.5 5.6 0.00041 26.2 0.8 41 322-371 3-43 (71)
47 d1nnqa2 g.41.5.1 (A:135-171) R 33.9 12 0.0009 21.2 2.2 26 336-368 4-29 (37)
48 d2akla2 g.41.3.5 (A:3-40) Hypo 33.0 6 0.00043 22.7 0.6 27 322-348 4-31 (38)
49 d1wfka_ g.50.1.1 (A:) Zinc fin 32.3 22 0.0016 24.3 3.8 51 318-368 6-63 (88)
50 d2pnxa1 g.50.1.2 (A:195-245) I 29.7 5.8 0.00042 24.3 0.2 41 322-367 3-50 (51)
51 d2drpa2 g.37.1.1 (A:140-165) T 29.0 3.6 0.00026 20.7 -0.7 13 323-335 3-15 (26)
52 d2dasa1 g.39.1.17 (A:8-56) Zin 27.0 39 0.0028 20.0 3.6 37 319-355 11-48 (49)
53 d1rutx4 g.39.1.3 (X:114-146) L 26.7 18 0.0013 19.3 1.9 18 323-340 1-18 (33)
54 d2epqa1 g.37.1.1 (A:380-411) P 26.5 5.1 0.00037 21.3 -0.4 15 321-335 3-17 (32)
55 d1v6ga2 g.39.1.3 (A:42-81) Act 24.7 19 0.0014 20.3 1.8 18 323-340 2-19 (40)
56 d3egfa_ g.3.11.1 (A:) Epiderma 23.7 47 0.0034 20.0 3.9 22 211-233 17-38 (53)
57 d1nqlb_ g.3.11.1 (B:) Epiderma 22.9 33 0.0024 20.4 2.9 24 207-232 12-35 (48)
58 d1wd2a_ g.44.1.1 (A:) Ariadne- 22.6 5.6 0.00041 25.4 -0.9 36 321-356 6-45 (60)
59 d1x3ha1 g.39.1.3 (A:8-42) Leup 22.2 11 0.00082 21.0 0.5 28 321-352 8-35 (35)
60 d2dj7a2 g.39.1.3 (A:8-43) Acti 22.0 33 0.0024 18.9 2.4 24 318-341 5-28 (36)
61 d2ct7a1 g.44.1.4 (A:8-80) Ring 20.9 6.7 0.00049 25.9 -0.8 36 322-357 19-56 (73)
No 1
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.70 E-value=2.5e-18 Score=117.81 Aligned_cols=52 Identities=44% Similarity=0.993 Sum_probs=47.7
Q ss_pred CCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCC
Q 043654 319 PDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPA 370 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~ 370 (390)
+++.+|+||+++|..++.+++++.|+|.||.+||++|++.+.+||+||+++.
T Consensus 3 ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence 4567899999999999999988779999999999999999999999999874
No 2
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.53 E-value=2.7e-15 Score=107.49 Aligned_cols=50 Identities=34% Similarity=0.883 Sum_probs=43.4
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCCCC
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARL 372 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~~ 372 (390)
..++|+||++.|.+ .++.++ |+|.||..||.+|++.+.+||+||+++...
T Consensus 4 ~~d~C~IC~~~~~~--~~~~~~-C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~~~ 53 (68)
T d1chca_ 4 VAERCPICLEDPSN--YSMALP-CLHAFCYVCITRWIRQNPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCSSCCSCCCS--CEEETT-TTEEESTTHHHHHHHHSCSTTTTCCCCCCE
T ss_pred CCCCCccCCcCccC--CcEEeC-CCCcCcHHHHHHHHHhCCcCCCCCcchHhh
Confidence 45789999999864 456778 999999999999999999999999987643
No 3
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=8.1e-15 Score=98.93 Aligned_cols=49 Identities=20% Similarity=0.453 Sum_probs=40.8
Q ss_pred CcccccccccCCCCcE-EEcCCCCCcccHhhHHHHHhC-CCCCcccCCcCCC
Q 043654 322 NTCPICLAEYKPKETL-KTIPECTHCFHADCVDEWLRL-NATCPVCRNSPAR 371 (390)
Q Consensus 322 ~~C~ICl~~~~~~~~~-~~l~~C~H~FH~~Ci~~wl~~-~~~CP~CR~~~~~ 371 (390)
.+|+||+++|..++.+ +.++ |||.||.+||++|++. +.+||+||+++.+
T Consensus 1 leCpICl~~~~~~~~~~~~~~-CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCT-CGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSS-SSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecC-CCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 3799999999877654 4456 9999999999999976 4579999998764
No 4
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=5.4e-14 Score=105.88 Aligned_cols=50 Identities=26% Similarity=0.578 Sum_probs=42.3
Q ss_pred CCCcccccccccCCCC---------------cEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCC
Q 043654 320 DDNTCPICLAEYKPKE---------------TLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPA 370 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~---------------~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~ 370 (390)
.+++|+||++++.... .+..++ |+|+||..||++||+.+.+||+||++..
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 84 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGV-CNHAFHFHCISRWLKTRQVCPLDNREWE 84 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEET-TSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEcc-ccCcccHHHHHHHHHHCCcCCCCCCccc
Confidence 4567999999887532 356677 9999999999999999999999999864
No 5
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=1.9e-13 Score=96.61 Aligned_cols=53 Identities=26% Similarity=0.546 Sum_probs=41.8
Q ss_pred CCCcccccccccCCC-C-cEEEcCCCCCcccHhhHHHHHhC-CCCCcccCCcCCCCC
Q 043654 320 DDNTCPICLAEYKPK-E-TLKTIPECTHCFHADCVDEWLRL-NATCPVCRNSPARLP 373 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~-~-~~~~l~~C~H~FH~~Ci~~wl~~-~~~CP~CR~~~~~~~ 373 (390)
++..|+||++++..+ + .+.+++ |||.||.+||..|++. +..||+||+.+....
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~-C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~~ 57 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNV-CGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECT-TCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCCCCCcCCceeecCCceEEEeCc-cChHhhHHHHHHHhCcCcCCCCCCCcCccccc
Confidence 467999999986443 3 345566 9999999999999965 567999999886544
No 6
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=2.8e-13 Score=107.22 Aligned_cols=54 Identities=20% Similarity=0.493 Sum_probs=42.1
Q ss_pred CCCCcccccccccCCC---------------CcEEEcCCCCCcccHhhHHHHHhC-----CCCCcccCCcCCCCC
Q 043654 319 PDDNTCPICLAEYKPK---------------ETLKTIPECTHCFHADCVDEWLRL-----NATCPVCRNSPARLP 373 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~---------------~~~~~l~~C~H~FH~~Ci~~wl~~-----~~~CP~CR~~~~~~~ 373 (390)
..+..|+||+++|... ..+++++ |+|+||.+||+.||+. +.+||+||+.+..+.
T Consensus 23 ~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~-CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~~ 96 (114)
T d1v87a_ 23 APEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTK-CSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKT 96 (114)
T ss_dssp CCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESS-SCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCS
T ss_pred cccccccchhheecccccccccccccccccccceEECC-CCChhhHHHHHHHHHhcCcCCCCccccccchhccCc
Confidence 3467899999998642 2356666 9999999999999964 347999999875553
No 7
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=6e-13 Score=97.79 Aligned_cols=50 Identities=30% Similarity=0.703 Sum_probs=41.9
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC-CCCCcccCCcCCCCCC
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL-NATCPVCRNSPARLPP 374 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~-~~~CP~CR~~~~~~~~ 374 (390)
...|+||++.+.. .++++ |||.||.+||..|++. ++.||+||+++.....
T Consensus 23 ~~~C~IC~~~~~~---~~~~~-CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~~ 73 (79)
T d1fbva4 23 FQLCKICAENDKD---VKIEP-CGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEP 73 (79)
T ss_dssp TTBCTTTSSSBCC---EECSS-SCCEECHHHHHHHHHTTCCSCTTTCCCCCCCCC
T ss_pred CCCCccCCCcCCC---eEEeC-CCCeeeHHHHHHHHHHCcCcCCCCCcCccCCce
Confidence 4579999998764 57788 9999999999999975 5789999999976544
No 8
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.27 E-value=4.5e-13 Score=91.67 Aligned_cols=50 Identities=10% Similarity=0.186 Sum_probs=42.3
Q ss_pred cccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCCCCCCC
Q 043654 323 TCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARLPPL 375 (390)
Q Consensus 323 ~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~~~~~ 375 (390)
.|+||++.++++ .+++.|||+||++||.+||+++.+||+||+++......
T Consensus 2 ~C~Ic~~~~~~P---v~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~dLi 51 (56)
T d2baya1 2 LCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIV 51 (56)
T ss_dssp CCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCE
T ss_pred CCccCCchHHhc---CccCCCCCcccHHHHHHHHhhccCCCccCCcCCHHhce
Confidence 699999998754 34555999999999999999999999999988765443
No 9
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=2.1e-12 Score=87.96 Aligned_cols=50 Identities=28% Similarity=0.587 Sum_probs=41.7
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCCCCCCCc
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARLPPLP 376 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~~~~~~ 376 (390)
+..+|+||++.|.+. +++| |||+||..||+.| +.+||+||+++......+
T Consensus 5 ~~l~C~IC~~~~~~p---~~lp-CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~~~~ 54 (56)
T d1bora_ 5 QFLRCQQCQAEAKCP---KLLP-CLHTLCSGCLEAS---GMQCPICQAPWPLGADTP 54 (56)
T ss_dssp CCSSCSSSCSSCBCC---SCST-TSCCSBTTTCSSS---SSSCSSCCSSSSCCSSCC
T ss_pred CCCCCcccCcccCCC---EEec-CCCHHhHHHHHcC---CCcCcCCCCcccCCCCCC
Confidence 346999999999865 5678 9999999999876 678999999998766554
No 10
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.11 E-value=1.6e-11 Score=91.00 Aligned_cols=49 Identities=24% Similarity=0.521 Sum_probs=40.8
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC-CCCCcccCCcCCCCC
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL-NATCPVCRNSPARLP 373 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~-~~~CP~CR~~~~~~~ 373 (390)
...|+||++.+.++ .+++ |||.|++.||.+|++. +..||+||.++....
T Consensus 23 ~l~C~IC~~~~~~p---v~~~-CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~ 72 (86)
T d1rmda2 23 SISCQICEHILADP---VETS-CKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (86)
T ss_dssp HTBCTTTCSBCSSE---EECT-TSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CcCCccCCcchhcc---eecC-CCChhhHHHHHHHHhhCCCcCcccCCCCChhh
Confidence 46899999998754 5677 9999999999999964 568999999876443
No 11
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=4.2e-11 Score=92.57 Aligned_cols=49 Identities=31% Similarity=0.671 Sum_probs=40.8
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCC---CCCcccCCcCCCCC
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLN---ATCPVCRNSPARLP 373 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~---~~CP~CR~~~~~~~ 373 (390)
...|+||++.|.++ ..++ |||.||..||..|++.+ ..||+||+++....
T Consensus 21 ~l~CpIC~~~~~~p---v~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 72 (103)
T d1jm7a_ 21 ILECPICLELIKEP---VSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 (103)
T ss_dssp HTSCSSSCCCCSSC---CBCT-TSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTT
T ss_pred CcCCCccCchhCCe---EEcC-CCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhh
Confidence 46899999999865 3467 99999999999999664 47999999886544
No 12
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=99.03 E-value=7.3e-11 Score=81.68 Aligned_cols=49 Identities=24% Similarity=0.481 Sum_probs=38.0
Q ss_pred CCCCcccccccccCCCCcEEEcC----CCCCcccHhhHHHHHh--CCCCCcccCCcCC
Q 043654 319 PDDNTCPICLAEYKPKETLKTIP----ECTHCFHADCVDEWLR--LNATCPVCRNSPA 370 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~----~C~H~FH~~Ci~~wl~--~~~~CP~CR~~~~ 370 (390)
.+...|+||++++.... +.| .|+|.||..||..|++ .+.+||+||+++.
T Consensus 4 ed~~~C~IC~~~~~~~~---~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 4 EDVPVCWICNEELGNER---FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCC---CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCccCCCce---eEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 45678999999986542 223 2469999999999984 4678999999864
No 13
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=2.1e-10 Score=87.54 Aligned_cols=49 Identities=22% Similarity=0.472 Sum_probs=39.5
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCCCCCC
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARLPP 374 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~~~~ 374 (390)
...|+||++.|..+ +...+ |||.||..||.+|+. ..||.||.++.....
T Consensus 22 ~l~C~IC~~~~~~p--v~~~~-CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~l 70 (97)
T d1jm7b_ 22 LLRCSRCTNILREP--VCLGG-CEHIFCSNCVSDCIG--TGCPVCYTPAWIQDL 70 (97)
T ss_dssp TTSCSSSCSCCSSC--BCCCS-SSCCBCTTTGGGGTT--TBCSSSCCBCSCSSC
T ss_pred cCCCccCCchhhcC--ceeCC-CCCchhHHHHHHHHh--ccccccCCcCchhhC
Confidence 56899999999865 33345 999999999999984 459999998765543
No 14
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.83 E-value=1e-09 Score=79.98 Aligned_cols=54 Identities=22% Similarity=0.496 Sum_probs=44.5
Q ss_pred CCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCC-CCCcccCCcCCCCCCCc
Q 043654 319 PDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLN-ATCPVCRNSPARLPPLP 376 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~-~~CP~CR~~~~~~~~~~ 376 (390)
.++..|+||++.|.++ .+++ |||.|++.||.+|++.+ ..||.||.++......+
T Consensus 6 P~~l~CpIc~~~m~dP---V~~~-cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l~p 60 (78)
T d1t1ha_ 6 PEYFRCPISLELMKDP---VIVS-TGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTP 60 (78)
T ss_dssp SSSSSCTTTSCCCSSE---EEET-TTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEE
T ss_pred CccCCCcCcCchhhCc---eEcc-CCCcchHHHHHHHHHHCCCCCCcccccCCcccccc
Confidence 4578999999999876 4567 99999999999999764 67999999987654433
No 15
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.82 E-value=1.1e-09 Score=80.25 Aligned_cols=52 Identities=17% Similarity=0.186 Sum_probs=43.0
Q ss_pred CCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC-CCCCcccCCcCCCCCC
Q 043654 319 PDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL-NATCPVCRNSPARLPP 374 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~-~~~CP~CR~~~~~~~~ 374 (390)
.++..|+||++-|.++ .+++ |||.|++.||.+|+.. +.+||.||.++.....
T Consensus 5 P~~l~CpIc~~l~~dP---v~~~-cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l 57 (80)
T d2c2la2 5 PDYLCGKISFELMREP---CITP-SGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQL 57 (80)
T ss_dssp CSTTBCTTTCSBCSSE---EECS-SCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGC
T ss_pred CccccCcCcCchhhhh---cccC-CcCeecHHHHHHHHhcCCccCCCcccccccccc
Confidence 4578999999999876 3567 9999999999999965 5679999998765443
No 16
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=1.2e-08 Score=77.45 Aligned_cols=54 Identities=17% Similarity=0.117 Sum_probs=45.3
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCCCCCCCc
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPARLPPLP 376 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~~~~~~ 376 (390)
++..||||++-|.++ .+++.|+|.|.+.||..||+++..||+||+++......+
T Consensus 21 ~~f~CPI~~~lm~dP---V~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~~L~p 74 (98)
T d1wgma_ 21 DEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRP 74 (98)
T ss_dssp TTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEE
T ss_pred HHhCCcCchhHHHHH---HhcccccchhhHHHHHHHHHhcCCcccccccccchhhcc
Confidence 478999999999876 467745578999999999999999999999987665444
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.45 E-value=3.3e-08 Score=74.43 Aligned_cols=48 Identities=23% Similarity=0.632 Sum_probs=38.2
Q ss_pred CCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC--------CCCCcccCC
Q 043654 319 PDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL--------NATCPVCRN 367 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~--------~~~CP~CR~ 367 (390)
....+|+||++++...+.++.++ |+|.||.+|+..|++. .-.||.|+-
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~-C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 3 SGSSGCKLCLGEYPVEQMTTIAQ-CQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETT-TTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCCCcCccCCCcccCCceEEECC-CCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 45689999999998766667666 9999999999999843 125998654
No 18
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.25 E-value=0.042 Score=38.25 Aligned_cols=67 Identities=21% Similarity=0.371 Sum_probs=45.9
Q ss_pred CCCCCcccccccccCC---CCcEEEcCCCCCcccHhhHHHHH-hCCCCCcccCCcCCCCCCCcccccccCC
Q 043654 318 KPDDNTCPICLAEYKP---KETLKTIPECTHCFHADCVDEWL-RLNATCPVCRNSPARLPPLPAAAAAADD 384 (390)
Q Consensus 318 ~~~~~~C~ICl~~~~~---~~~~~~l~~C~H~FH~~Ci~~wl-~~~~~CP~CR~~~~~~~~~~~~~~~~~~ 384 (390)
......|.||-++.-. ++...--..|+--.++.|.+==. ..++.||.|++++......|....+++|
T Consensus 13 ~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~e 83 (93)
T d1weoa_ 13 NLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDE 83 (93)
T ss_dssp CCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCC
T ss_pred hcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCccc
Confidence 3456799999998753 33333333577778999987554 4578899999999877766654443333
No 19
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.24 E-value=0.043 Score=34.77 Aligned_cols=44 Identities=27% Similarity=0.605 Sum_probs=31.2
Q ss_pred cccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCC----CCCcccCC
Q 043654 323 TCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLN----ATCPVCRN 367 (390)
Q Consensus 323 ~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~----~~CP~CR~ 367 (390)
.|.||...-.. +.+..--.|...||..|++.-+... -.||.||.
T Consensus 2 ~C~vC~~~~~~-~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGED-DKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCC-SCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCC-CCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 48888766443 3444455699999999999876442 35999975
No 20
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=90.87 E-value=0.034 Score=37.13 Aligned_cols=50 Identities=26% Similarity=0.503 Sum_probs=36.6
Q ss_pred CCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHH-----hCCCCCcccCCc
Q 043654 319 PDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWL-----RLNATCPVCRNS 368 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl-----~~~~~CP~CR~~ 368 (390)
.....|.||.+....++....--.|+..||..|+..=. ..+..||.|+..
T Consensus 4 ~~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 34679999999877766655555699999999996421 124579999864
No 21
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.63 E-value=0.48 Score=32.52 Aligned_cols=36 Identities=22% Similarity=0.647 Sum_probs=26.7
Q ss_pred CCCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHH
Q 043654 318 KPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEW 355 (390)
Q Consensus 318 ~~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~w 355 (390)
...+..|.|| +.|...+.. .-..|+-+||..|+.+-
T Consensus 12 v~~D~mC~vC-~v~t~~~l~-pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 12 VVNDEMCDVC-EVWTAESLF-PCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCSCCCTTT-CCCCSSCCS-SCSSSSSCCCHHHHHHH
T ss_pred CCcCcccccc-Cccccccee-cceeecchhhHHHHHHh
Confidence 4567899999 777765433 22248899999999997
No 22
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.81 E-value=0.35 Score=32.53 Aligned_cols=46 Identities=28% Similarity=0.673 Sum_probs=31.7
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCC----CCCcccCCcC
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLN----ATCPVCRNSP 369 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~----~~CP~CR~~~ 369 (390)
....|.||.+. ++ +..--.|...||..|+.+.+... -.||.|+...
T Consensus 6 ~c~~C~~C~~~---~~-ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 55 (70)
T d1fp0a1 6 SATICRVCQKP---GD-LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 55 (70)
T ss_dssp SSSCCSSSCSS---SC-CEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCCCCCCc---CE-EEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcC
Confidence 34567777643 43 44444699999999999887443 3499997644
No 23
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.95 E-value=0.24 Score=27.46 Aligned_cols=29 Identities=17% Similarity=0.482 Sum_probs=25.0
Q ss_pred CcccccccccCCCCcEEEcCCCCCcccHhhH
Q 043654 322 NTCPICLAEYKPKETLKTIPECTHCFHADCV 352 (390)
Q Consensus 322 ~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci 352 (390)
..|+-|...+...|.|+.-. +++||.+|+
T Consensus 3 g~Ca~C~~~I~~~e~VmRA~--~~VyHl~CF 31 (31)
T d1rutx3 3 GACSACGQSIPASELVMRAQ--GNVYHLKCF 31 (31)
T ss_dssp EECTTTCCEECTTSEEEEET--TEEECGGGC
T ss_pred cccccccCcCChhHhheecc--cceeeeccC
Confidence 46999999999999988874 799999984
No 24
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.78 E-value=0.16 Score=33.23 Aligned_cols=46 Identities=24% Similarity=0.551 Sum_probs=31.9
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC----CCCCcccCCcC
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL----NATCPVCRNSP 369 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~----~~~CP~CR~~~ 369 (390)
.+..|.||.+. ++ +..--.|.-.||..|++..+.. .-.||.|+...
T Consensus 8 ~~~~C~~C~~~---g~-lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~ 57 (61)
T d1mm2a_ 8 HMEFCRVCKDG---GE-LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCC---SS-CBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CcCCCcCCCCC---Ce-EEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCcc
Confidence 45679999853 33 3333458999999999876543 33599998654
No 25
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.04 E-value=2.7 Score=28.56 Aligned_cols=47 Identities=26% Similarity=0.493 Sum_probs=32.6
Q ss_pred CcccccccccCCCCcEEEcCCCCCcccHhhHH--HH-Hh--CCCCCcccCCcC
Q 043654 322 NTCPICLAEYKPKETLKTIPECTHCFHADCVD--EW-LR--LNATCPVCRNSP 369 (390)
Q Consensus 322 ~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~--~w-l~--~~~~CP~CR~~~ 369 (390)
..| ||...+...+....--.|.--||..|+. .. .. .+..||.|+...
T Consensus 13 v~C-iC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~ 64 (79)
T d1wepa_ 13 VYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred eEe-ECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCc
Confidence 455 9998776555444555699999999995 22 22 246799998754
No 26
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.37 E-value=0.31 Score=34.36 Aligned_cols=51 Identities=22% Similarity=0.431 Sum_probs=34.4
Q ss_pred CCcccccccccCC-CCcEEEcCCCCCcccHhhHHHHH-----hC---CCCCcccCCcCCC
Q 043654 321 DNTCPICLAEYKP-KETLKTIPECTHCFHADCVDEWL-----RL---NATCPVCRNSPAR 371 (390)
Q Consensus 321 ~~~C~ICl~~~~~-~~~~~~l~~C~H~FH~~Ci~~wl-----~~---~~~CP~CR~~~~~ 371 (390)
...|.||...... ...+..--.|...||..|+.+.+ +. .-.||.|+.....
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~~ 75 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKR 75 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCC
T ss_pred cCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchHhh
Confidence 4679999875443 33455555699999999987542 21 3469999765433
No 27
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.37 E-value=0.35 Score=30.38 Aligned_cols=44 Identities=20% Similarity=0.483 Sum_probs=29.5
Q ss_pred cccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccC
Q 043654 323 TCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCR 366 (390)
Q Consensus 323 ~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR 366 (390)
.|.+|...|..-..-..-..||++|+..|....-+....|..|.
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~ 45 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 45 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhHh
Confidence 58889998876544344446999999999766555556677774
No 28
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.04 E-value=1.6 Score=29.19 Aligned_cols=44 Identities=30% Similarity=0.654 Sum_probs=26.2
Q ss_pred CCcccccccccCCCCcEEEc-CCCC-CcccHhhHHHHHhC----CCCCcccCCc
Q 043654 321 DNTCPICLAEYKPKETLKTI-PECT-HCFHADCVDEWLRL----NATCPVCRNS 368 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l-~~C~-H~FH~~Ci~~wl~~----~~~CP~CR~~ 368 (390)
..-| ||.+... ++.+... -.|- .-||..|+. |.. +-.||.||..
T Consensus 16 ~~~C-iC~~~~~-~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 16 PTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp CCCS-TTCCCCC-SSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CCEE-EeCCCCC-CCEEEEECCCCCCcCccCccCC--CCcCCCCcEECcCCccc
Confidence 4556 9987632 3333332 1244 469999985 322 3469999864
No 29
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.84 E-value=3.5 Score=27.51 Aligned_cols=46 Identities=26% Similarity=0.548 Sum_probs=30.5
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHH----H--H---HhCCCCCcccCCc
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVD----E--W---LRLNATCPVCRNS 368 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~----~--w---l~~~~~CP~CR~~ 368 (390)
...| ||......+ ....--.|.--||..|+. . . ...+..||.|+..
T Consensus 16 ~~~C-iC~~~~~~~-~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~ 70 (76)
T d1wema_ 16 ALYC-ICRQPHNNR-FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCCSS-CEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred cCEE-ECCCccCCC-eEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcCc
Confidence 4568 898776543 344445699999999982 1 1 1335789999654
No 30
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.23 E-value=13 Score=24.29 Aligned_cols=39 Identities=18% Similarity=0.327 Sum_probs=29.9
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL 358 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~ 358 (390)
....|.+|.|.+++..-|.--..=+|.|+-.|-...+++
T Consensus 7 ~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~ 45 (80)
T d2cs3a1 7 GPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 45 (80)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHh
Confidence 457899999999876555432234799999999999865
No 31
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=62.19 E-value=3.7 Score=27.67 Aligned_cols=49 Identities=20% Similarity=0.434 Sum_probs=32.3
Q ss_pred CCCcccccccccCCCCcEEEc-CCCCCcccHhhHHH----HH-----hCCCCCcccCCcC
Q 043654 320 DDNTCPICLAEYKPKETLKTI-PECTHCFHADCVDE----WL-----RLNATCPVCRNSP 369 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l-~~C~H~FH~~Ci~~----wl-----~~~~~CP~CR~~~ 369 (390)
+...| ||.+....+..+..- ..|..-||..|+.- .- .....||.|+..-
T Consensus 15 ~~~~C-~C~~~~~~~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T d1wewa_ 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CccEe-ECCCccCCCcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCcC
Confidence 34678 899887655544433 24999999999842 10 1136799997654
No 32
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=61.79 E-value=0.81 Score=30.67 Aligned_cols=46 Identities=17% Similarity=0.298 Sum_probs=32.3
Q ss_pred CcccccccccCCCCcEEEcCCCCCcccHhhHHHHH----hCCCCCcccCCc
Q 043654 322 NTCPICLAEYKPKETLKTIPECTHCFHADCVDEWL----RLNATCPVCRNS 368 (390)
Q Consensus 322 ~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl----~~~~~CP~CR~~ 368 (390)
..| ||......++....--.|..-||..|+..-. .....||.|+..
T Consensus 17 ~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~ 66 (72)
T d1weea_ 17 VDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred EEe-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence 457 7887766666555666799999999985422 234569999764
No 33
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.91 E-value=3.2 Score=26.42 Aligned_cols=43 Identities=28% Similarity=0.667 Sum_probs=31.0
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHh-CCCCCccc
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLR-LNATCPVC 365 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~-~~~~CP~C 365 (390)
...|--|..++.+ ..+..-++|+++|+.+| |-++. .-.+||-|
T Consensus 15 ~~~C~gC~~~l~~-~~~y~C~~C~~~FC~dC-D~fiHe~lh~CpgC 58 (59)
T d1z60a1 15 ERFCYGCQGELKD-QHVYVCAVCQNVFCVDC-DVFVHDSLHSCPGC 58 (59)
T ss_dssp CCEETTTTEECTT-SEEECCTTTTCCBCHHH-HHTTTTTSCSSSTT
T ss_pred CCCccCCCCcCCC-CceEECcCCCCcccccc-chhhhhhhcCCCCC
Confidence 5679999988864 34566778999999999 44442 33568877
No 34
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.01 E-value=3.1 Score=23.68 Aligned_cols=32 Identities=25% Similarity=0.462 Sum_probs=22.7
Q ss_pred CCCCCcccccccccCCCCcEEEcCCCCCcccHhhH
Q 043654 318 KPDDNTCPICLAEYKPKETLKTIPECTHCFHADCV 352 (390)
Q Consensus 318 ~~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci 352 (390)
....+.|.+|-...-.-+.+. .=|++||+.|+
T Consensus 5 ~g~~~~C~~C~K~VY~~Erl~---a~g~~yHk~CF 36 (36)
T d2co8a2 5 AGAGDLCALCGEHLYVLERLC---VNGHFFHRSCF 36 (36)
T ss_dssp CCSSCBCSSSCCBCCTTTBCC---BTTBCCBTTTC
T ss_pred CCCCCcccccCCEEeeeeEEE---ecCcEeccccC
Confidence 344689999988766555432 25799999984
No 35
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.40 E-value=1.1 Score=25.35 Aligned_cols=28 Identities=14% Similarity=0.472 Sum_probs=21.6
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhH
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCV 352 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci 352 (390)
-..|.+|.+.+.+. +|...|-.||..|+
T Consensus 8 lEkC~~C~~~I~dr----iLrA~Gk~yHP~CF 35 (35)
T d2dloa1 8 LEKCATCSQPILDR----ILRAMGKAYHPGCF 35 (35)
T ss_dssp CCBCTTTCCBCCSC----CEEETTEEECTTTC
T ss_pred HHHHHHhchHHHHH----HHHHhCCCCCCCCC
Confidence 46899999988754 45557889998884
No 36
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.34 E-value=4.2 Score=26.30 Aligned_cols=35 Identities=17% Similarity=0.450 Sum_probs=25.0
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhHHH
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~ 354 (390)
+...|.+|-..|..-..--.-..||++|+..|...
T Consensus 7 ~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~ 41 (64)
T d1joca1 7 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 41 (64)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCcCCcccCCccccchhhhCCeecccccCC
Confidence 34679999999976433233446999999999543
No 37
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=53.78 E-value=4 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.509 Sum_probs=25.3
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHH
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDE 354 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~ 354 (390)
+..|.+|...|..-..-..-..||++|+.+|...
T Consensus 13 ~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~ 46 (72)
T d1dvpa2 13 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 46 (72)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCccccCCCcccCccccccccccCCeeChhhhCC
Confidence 3579999999976543334446999999999654
No 38
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=50.98 E-value=5.7 Score=29.33 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=25.9
Q ss_pred CCCCCcccccccccCC-CCcEEEcCCCCCcccHhhH
Q 043654 318 KPDDNTCPICLAEYKP-KETLKTIPECTHCFHADCV 352 (390)
Q Consensus 318 ~~~~~~C~ICl~~~~~-~~~~~~l~~C~H~FH~~Ci 352 (390)
......|.+|...|.. ...-..-..|+++||..|-
T Consensus 45 ~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~ 80 (124)
T d1zbdb_ 45 GDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 80 (124)
T ss_dssp SCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred ccCCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence 3445789999999874 3333455679999999994
No 39
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.15 E-value=7.1 Score=25.37 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=24.7
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhHHHH
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCVDEW 355 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~w 355 (390)
+..|.+|...|..-..--.-..||.+|+..|...+
T Consensus 5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~ 39 (67)
T d1vfya_ 5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNS 39 (67)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEE
T ss_pred CcccccCCCcccCcccccccccCCCEecccccCCc
Confidence 35799999998754332333369999999996443
No 40
>d1g47a1 g.39.1.3 (A:1-35) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.56 E-value=7.4 Score=21.53 Aligned_cols=30 Identities=23% Similarity=0.612 Sum_probs=23.7
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhh
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADC 351 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~C 351 (390)
....|.=|.+-|.+.+++.-. =|-+||..|
T Consensus 6 ~~~~C~RC~~gF~p~EkiVNS--nGEl~H~qC 35 (35)
T d1g47a1 6 ASATCERCKGGFAPAEKIVNS--NGELYHEQC 35 (35)
T ss_dssp CCCBCSSSCCBCCSTTTCEEE--TTEEECTTT
T ss_pred HHHHHHHHccCCCchHHhhcC--CCccccccC
Confidence 356899999999988887665 477888877
No 41
>d1b8ta3 g.39.1.3 (A:101-143) Cysteine-rich (intestinal) protein, CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=40.34 E-value=4.4 Score=24.06 Aligned_cols=30 Identities=20% Similarity=0.509 Sum_probs=22.7
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhH
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCV 352 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci 352 (390)
..+.|+.|-...-.-+.+.. =|+.||+.|+
T Consensus 14 ~~~kC~~C~k~VY~~E~~~~---~g~~~Hk~CF 43 (43)
T d1b8ta3 14 GSDGCPRCGQAVYAAEKVIG---AGKSWHKSCF 43 (43)
T ss_dssp CCEECTTTSCEECSSSCEEE---TTEEECTTTC
T ss_pred CCCcCccCCCEeeHHHHhhc---CCCccccCCC
Confidence 34789999987776665543 5799999984
No 42
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=38.18 E-value=9.6 Score=21.55 Aligned_cols=27 Identities=19% Similarity=0.530 Sum_probs=16.8
Q ss_pred CcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCc
Q 043654 335 ETLKTIPECTHCFHADCVDEWLRLNATCPVCRNS 368 (390)
Q Consensus 335 ~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~ 368 (390)
+.+.+-+.|||+.-.+ --..||+|.++
T Consensus 3 ~~~~vC~vCGyi~~g~-------~Pe~CPvCg~~ 29 (36)
T d1yuza2 3 DKFHLCPICGYIHKGE-------DFEKCPICFRP 29 (36)
T ss_dssp CCEEECSSSCCEEESS-------CCSBCTTTCCB
T ss_pred CCEEECCCCCCEeeCC-------CCCcCCCCCCc
Confidence 4455666788885421 13469999765
No 43
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.91 E-value=10 Score=21.24 Aligned_cols=30 Identities=30% Similarity=0.573 Sum_probs=21.8
Q ss_pred CCCcccccccccCCCCcEEEcCCCCCcccHhhH
Q 043654 320 DDNTCPICLAEYKPKETLKTIPECTHCFHADCV 352 (390)
Q Consensus 320 ~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci 352 (390)
..+.|..|....-.-+.+. - =|++||+.|+
T Consensus 6 ~~~kC~~C~K~VY~~E~~~--a-~g~~~Hk~CF 35 (35)
T d2d8ya1 6 ARETCVECQKTVYPMERLL--A-NQQVFHISCF 35 (35)
T ss_dssp SSCBCTTTCCBCCTTSEEE--C-SSSEEETTTC
T ss_pred CCcccccCCCEEeeeeeEe--c-CCeehhhccC
Confidence 3578999988766655433 2 5799999984
No 44
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=36.63 E-value=6.4 Score=26.28 Aligned_cols=12 Identities=33% Similarity=1.079 Sum_probs=10.6
Q ss_pred cccHhhHHHHHh
Q 043654 346 CFHADCVDEWLR 357 (390)
Q Consensus 346 ~FH~~Ci~~wl~ 357 (390)
-||+.|+..|..
T Consensus 39 GFCRNCLskWy~ 50 (79)
T d2o35a1 39 GFCRNCLSNWYR 50 (79)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999984
No 45
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=35.86 E-value=5.4 Score=28.54 Aligned_cols=27 Identities=22% Similarity=0.648 Sum_probs=18.2
Q ss_pred CCCCcccHhhHHHHHhCCCCCcccCCcCCCCC
Q 043654 342 ECTHCFHADCVDEWLRLNATCPVCRNSPARLP 373 (390)
Q Consensus 342 ~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~~~ 373 (390)
+||-+|- + =++.-+.||.||++...++
T Consensus 72 kCGfvFr-~----~~kkPSRCP~CKSE~Ie~P 98 (105)
T d2gmga1 72 KCGFVFK-A----EINIPSRCPKCKSEWIEEP 98 (105)
T ss_dssp TTCCBCC-C----CSSCCSSCSSSCCCCBCCC
T ss_pred hcCCeec-c----cCCCCCCCCCCCCccccCC
Confidence 5888882 1 2344567999999865554
No 46
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=34.52 E-value=5.6 Score=26.17 Aligned_cols=41 Identities=20% Similarity=0.476 Sum_probs=24.4
Q ss_pred CcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhCCCCCcccCCcCCC
Q 043654 322 NTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRLNATCPVCRNSPAR 371 (390)
Q Consensus 322 ~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~~~~ 371 (390)
..||.|..+++.......-..|...|- ....||-|++++..
T Consensus 3 ~~CP~C~~eL~~~~~~~~C~~C~~~~~---------~~a~CPdC~~~Le~ 43 (71)
T d2jnea1 3 LHCPQCQHVLDQDNGHARCRSCGEFIE---------MKALCPDCHQPLQV 43 (71)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEE---------EEEECTTTCSBCEE
T ss_pred CcCCCccCcccccCCCEehhhhhhhhe---------eEEeCCccccHHHH
Confidence 579999888775333333333443332 24568999887744
No 47
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=33.88 E-value=12 Score=21.19 Aligned_cols=26 Identities=23% Similarity=0.487 Sum_probs=16.3
Q ss_pred cEEEcCCCCCcccHhhHHHHHhCCCCCcccCCc
Q 043654 336 TLKTIPECTHCFHADCVDEWLRLNATCPVCRNS 368 (390)
Q Consensus 336 ~~~~l~~C~H~FH~~Ci~~wl~~~~~CP~CR~~ 368 (390)
.+.+-+.|||++..+ --..||+|.++
T Consensus 4 ~~~~C~vCG~i~~g~-------~P~~CPvCg~~ 29 (37)
T d1nnqa2 4 KVYICPICGYTAVDE-------APEYCPVCGAP 29 (37)
T ss_dssp CEEECTTTCCEEESC-------CCSBCTTTCCB
T ss_pred cEEECCCCCCEecCC-------CCCcCCCCCCc
Confidence 345555688886542 23469999775
No 48
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.01 E-value=6 Score=22.70 Aligned_cols=27 Identities=37% Similarity=0.856 Sum_probs=18.4
Q ss_pred CcccccccccCCCC-cEEEcCCCCCccc
Q 043654 322 NTCPICLAEYKPKE-TLKTIPECTHCFH 348 (390)
Q Consensus 322 ~~C~ICl~~~~~~~-~~~~l~~C~H~FH 348 (390)
..|+-|-.+|.-.+ .+.+-|.|+|-+-
T Consensus 4 P~CP~C~seytYedg~l~vCPeC~hEW~ 31 (38)
T d2akla2 4 PPCPQCNSEYTYEDGALLVCPECAHEWS 31 (38)
T ss_dssp CCCTTTCCCCCEECSSSEEETTTTEEEC
T ss_pred CcCCCCCCcceEcCCCEEECCcccCcCC
Confidence 46888888886433 4556677888654
No 49
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.31 E-value=22 Score=24.26 Aligned_cols=51 Identities=14% Similarity=0.335 Sum_probs=36.0
Q ss_pred CCCCCcccccccccCCCCcEEEcCCCCCcccHhhHHHHHhC-------CCCCcccCCc
Q 043654 318 KPDDNTCPICLAEYKPKETLKTIPECTHCFHADCVDEWLRL-------NATCPVCRNS 368 (390)
Q Consensus 318 ~~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci~~wl~~-------~~~CP~CR~~ 368 (390)
...+..|.+|..+|..-..-..-..||-+|+..|...++.. ...|..|-..
T Consensus 6 ~~~~s~C~~C~~~Fs~~~rrhhCr~CG~vfC~~Cs~~~~~lp~~~~~~~RVC~~C~~~ 63 (88)
T d1wfka_ 6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTI 63 (88)
T ss_dssp CCCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHH
T ss_pred CcccCcCcccCchhccccccccccccChhhChHHhCCccccCCCCCCCCeECHHHHHH
Confidence 34567899999999865554455579999999998765421 1358888543
No 50
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=29.65 E-value=5.8 Score=24.26 Aligned_cols=41 Identities=29% Similarity=0.694 Sum_probs=23.0
Q ss_pred CcccccccccCCCCcEEEcC--CCC-CcccHhhHHHHHhC----CCCCcccCC
Q 043654 322 NTCPICLAEYKPKETLKTIP--ECT-HCFHADCVDEWLRL----NATCPVCRN 367 (390)
Q Consensus 322 ~~C~ICl~~~~~~~~~~~l~--~C~-H~FH~~Ci~~wl~~----~~~CP~CR~ 367 (390)
.-| ||..... ++.+ ..- .|- --||..|+. |.. +-.||.|++
T Consensus 3 ~yC-~C~~~~~-~~mi-~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 3 TYC-LCHQVSY-GEMI-GCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp EET-TTTEECC-SEEE-ECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred cEE-EcCCCCC-CCEE-EEecCCCCCCCEeCCccC--CCcCCCCcEECcCCCC
Confidence 357 7876642 3322 222 233 469999996 322 235888875
No 51
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=28.96 E-value=3.6 Score=20.70 Aligned_cols=13 Identities=38% Similarity=1.206 Sum_probs=10.2
Q ss_pred cccccccccCCCC
Q 043654 323 TCPICLAEYKPKE 335 (390)
Q Consensus 323 ~C~ICl~~~~~~~ 335 (390)
-|++|+.+|...+
T Consensus 3 pcp~cfkeftrkd 15 (26)
T d2drpa2 3 PCPFCFKEFTRKD 15 (26)
T ss_dssp ECTTTCCEESCHH
T ss_pred CCchhhHHhcccc
Confidence 5899999987654
No 52
>d2dasa1 g.39.1.17 (A:8-56) Zinc finger MYM-type protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.01 E-value=39 Score=20.03 Aligned_cols=37 Identities=22% Similarity=0.465 Sum_probs=29.5
Q ss_pred CCCCcccccccccCCCCcEEEcCCCCCcccH-hhHHHH
Q 043654 319 PDDNTCPICLAEYKPKETLKTIPECTHCFHA-DCVDEW 355 (390)
Q Consensus 319 ~~~~~C~ICl~~~~~~~~~~~l~~C~H~FH~-~Ci~~w 355 (390)
.....|+-|...+..++..-.-....|.|+. .||..+
T Consensus 11 a~~v~Ca~Ckk~lqKGQTAyqrkGs~~LFCSt~Cl~~~ 48 (49)
T d2dasa1 11 PAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF 48 (49)
T ss_dssp CSSCBCTTTCCBCCTTSCCEECTTCCCEESSHHHHHHH
T ss_pred ceEeEecccchHHhccchHHhhCCCcceeEcchhhccc
Confidence 3467999999999999977766778999984 577653
No 53
>d1rutx4 g.39.1.3 (X:114-146) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.67 E-value=18 Score=19.32 Aligned_cols=18 Identities=28% Similarity=0.652 Sum_probs=14.3
Q ss_pred cccccccccCCCCcEEEc
Q 043654 323 TCPICLAEYKPKETLKTI 340 (390)
Q Consensus 323 ~C~ICl~~~~~~~~~~~l 340 (390)
.|++|...+.+++..-..
T Consensus 1 tC~tC~n~LVPGDRFHyv 18 (33)
T d1rutx4 1 TCSTCRNRLVPGDRFHYI 18 (33)
T ss_dssp BCTTTCCBCCTTCEEEEE
T ss_pred CcccccccccCCceeEEe
Confidence 489999999888876554
No 54
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.54 E-value=5.1 Score=21.31 Aligned_cols=15 Identities=33% Similarity=0.915 Sum_probs=10.6
Q ss_pred CCcccccccccCCCC
Q 043654 321 DNTCPICLAEYKPKE 335 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~ 335 (390)
..+|+||...|+..+
T Consensus 3 p~~cpic~qrfkrkd 17 (32)
T d2epqa1 3 PYSCPVCGLRFKRKD 17 (32)
T ss_dssp SSEETTTTEECSCHH
T ss_pred CcccchHHHHhhccc
Confidence 457888888877543
No 55
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.65 E-value=19 Score=20.27 Aligned_cols=18 Identities=17% Similarity=0.610 Sum_probs=15.3
Q ss_pred cccccccccCCCCcEEEc
Q 043654 323 TCPICLAEYKPKETLKTI 340 (390)
Q Consensus 323 ~C~ICl~~~~~~~~~~~l 340 (390)
.|++|...|-.+|.|.--
T Consensus 2 vC~vCr~pFP~GDRVTFn 19 (40)
T d1v6ga2 2 VCAVCRLPFPPGDRVTFN 19 (40)
T ss_dssp SCSSSCCCCCSSSCEEEE
T ss_pred cccccCCCCCCCCeEEEc
Confidence 699999999999987643
No 56
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.72 E-value=47 Score=20.05 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=16.0
Q ss_pred CCeeeeccCCcceeEeeccCCCC
Q 043654 211 GGRCGFKNNSSTEIGCLSLHHRE 233 (390)
Q Consensus 211 gG~Cg~~~~~~~~f~C~~~~~~~ 233 (390)
||.|.+..+... +.|.|.....
T Consensus 17 gG~C~~~~~~~~-~~C~C~~gy~ 38 (53)
T d3egfa_ 17 GGVCMHIESLDS-YTCNCVIGYS 38 (53)
T ss_dssp SCEEEEESSSSC-EEEECCTTCC
T ss_pred CcEeeccCCCCC-eEeECCCCCc
Confidence 899987544444 8999987653
No 57
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.93 E-value=33 Score=20.36 Aligned_cols=24 Identities=17% Similarity=0.405 Sum_probs=17.0
Q ss_pred ccCCCCeeeeccCCcceeEeeccCCC
Q 043654 207 CEKGGGRCGFKNNSSTEIGCLSLHHR 232 (390)
Q Consensus 207 C~~sgG~Cg~~~~~~~~f~C~~~~~~ 232 (390)
|.. ||.|.+..+... +.|.|....
T Consensus 12 C~n-gG~C~~~~~~~~-~~C~C~~gy 35 (48)
T d1nqlb_ 12 CLH-DGVCMYIEALDK-YACNCVVGY 35 (48)
T ss_dssp ECT-TCEEEEETTTTE-EEEEECTTE
T ss_pred CCC-CcEEeeeCCCCC-eEEeCCCCc
Confidence 443 899988655444 899998655
No 58
>d1wd2a_ g.44.1.1 (A:) Ariadne-1 protein homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.61 E-value=5.6 Score=25.36 Aligned_cols=36 Identities=19% Similarity=0.535 Sum_probs=23.1
Q ss_pred CCcccccccccCCCCcEEEcC----CCCCcccHhhHHHHH
Q 043654 321 DNTCPICLAEYKPKETLKTIP----ECTHCFHADCVDEWL 356 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~----~C~H~FH~~Ci~~wl 356 (390)
...||-|...++..+..-.+. .|++.|+..|..+|-
T Consensus 6 tK~CP~C~~~ieK~~GCnhM~C~~~~C~~~fCw~C~~~~~ 45 (60)
T d1wd2a_ 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWE 45 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSG
T ss_pred CcCCCCCCCeEEECCCCCCeEeCCCCCCCeEECCCCCccc
Confidence 467999988887654333322 266777777766664
No 59
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.19 E-value=11 Score=21.04 Aligned_cols=28 Identities=18% Similarity=0.416 Sum_probs=20.0
Q ss_pred CCcccccccccCCCCcEEEcCCCCCcccHhhH
Q 043654 321 DNTCPICLAEYKPKETLKTIPECTHCFHADCV 352 (390)
Q Consensus 321 ~~~C~ICl~~~~~~~~~~~l~~C~H~FH~~Ci 352 (390)
...|.-|.+.+.. +-+. .-+..||.+|+
T Consensus 8 apkC~~C~~~I~g-~~v~---Al~~~wHpeCF 35 (35)
T d1x3ha1 8 SPKCGGCNRPVLE-NYLS---AMDTVWHPECF 35 (35)
T ss_dssp SCBCTTTCCBCCS-SCEE---ETTEEECTTTC
T ss_pred ChhhhhcCCcccc-hhee---ecCCccCcccC
Confidence 4679999999873 3332 26789999883
No 60
>d2dj7a2 g.39.1.3 (A:8-43) Actin-binding LIM protein 3, abLIM-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.04 E-value=33 Score=18.91 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=19.6
Q ss_pred CCCCCcccccccccCCCCcEEEcC
Q 043654 318 KPDDNTCPICLAEYKPKETLKTIP 341 (390)
Q Consensus 318 ~~~~~~C~ICl~~~~~~~~~~~l~ 341 (390)
......|+-|-++++.++.+.-|-
T Consensus 5 ~~g~~~CagCg~eik~gQaL~ALd 28 (36)
T d2dj7a2 5 IRGPSHCAGCKEEIKHGQSLLALD 28 (36)
T ss_dssp CSSCSCCTTTCCCCSSSCCEEETT
T ss_pred ccCCccccccchhhhCCceeeeee
Confidence 345678999999999999877664
No 61
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.93 E-value=6.7 Score=25.91 Aligned_cols=36 Identities=22% Similarity=0.568 Sum_probs=22.6
Q ss_pred CcccccccccC--CCCcEEEcCCCCCcccHhhHHHHHh
Q 043654 322 NTCPICLAEYK--PKETLKTIPECTHCFHADCVDEWLR 357 (390)
Q Consensus 322 ~~C~ICl~~~~--~~~~~~~l~~C~H~FH~~Ci~~wl~ 357 (390)
.-||-|-..+. .+....+-+.|++.|+..|-.+|-.
T Consensus 19 k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~ 56 (73)
T d2ct7a1 19 LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEE 56 (73)
T ss_dssp ECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCT
T ss_pred CCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcchhc
Confidence 44666654332 2334445567999999999888843
Done!