Query         043659
Match_columns 112
No_of_seqs    107 out of 714
Neff          6.6 
Searched_HMMs 46136
Date          Fri Mar 29 07:07:27 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043659.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043659hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 cd04660 nsLTP_like nsLTP_like:  99.7 3.8E-17 8.2E-22  103.7   2.7   66   35-106     6-73  (73)
  2 PF14368 LTP_2:  Probable lipid  99.6 2.7E-17 5.8E-22  107.6  -0.3   68   36-106    25-96  (96)
  3 cd01960 nsLTP1 nsLTP1: Non-spe  99.6 2.6E-16 5.7E-21  102.9   1.2   78   24-106     2-88  (89)
  4 cd01959 nsLTP2 nsLTP2: Non-spe  99.5 3.2E-15   7E-20   93.7   3.3   61   35-101     4-64  (66)
  5 cd00010 AAI_LTSS AAI_LTSS: Alp  99.5   6E-15 1.3E-19   90.4   2.3   61   37-97      1-63  (63)
  6 smart00499 AAI Plant lipid tra  99.1   5E-11 1.1E-15   74.0   2.8   69   35-106     6-79  (79)
  7 PF00234 Tryp_alpha_amyl:  Prot  98.8 5.1E-11 1.1E-15   77.2  -4.8   67   36-106    14-90  (90)
  8 PF14547 Hydrophob_seed:  Hydro  96.7 0.00056 1.2E-08   44.8   0.4   72   35-107     7-85  (85)
  9 cd01958 HPS_like HPS_like: Hyd  96.5  0.0025 5.5E-08   41.7   2.6   67   36-106    10-85  (85)
 10 cd00261 AAI_SS AAI_SS: Alpha-A  74.3     1.4   3E-05   29.1   0.7   45   52-98     44-103 (110)
 11 PF05617 Prolamin_like:  Prolam  44.7      17 0.00037   21.9   1.7   21   49-71     26-46  (70)

No 1  
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=99.66  E-value=3.8e-17  Score=103.73  Aligned_cols=66  Identities=26%  Similarity=0.522  Sum_probs=56.6

Q ss_pred             cCcccCccCCCCCC--CCCCHHHHHHHHhcCCCCCccccccccchhhccCCChHHHhhhhccCCCCCCCCCCCC
Q 043659           35 MKLSPCATAPQDEK--VPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNITKLPADYVC  106 (112)
Q Consensus        35 ~~L~pC~~~~~~~~--~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi~~~p~~~~C  106 (112)
                      ..|+||++|+++++  .+||+.||++||++  +..|+|.++.....  .+||+++|++||++||++ +|+ ++|
T Consensus         6 ~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~--~~~C~C~~~~~~~~--~~i~~~~a~~Lp~~Cgv~-~p~-~~C   73 (73)
T cd04660           6 DLLAECQPYVTGPNPPPPPSRECCAALRRA--DLPCLCRYKTSLVL--QIIDPDKAVYLPAKCGLP-LPP-SSC   73 (73)
T ss_pred             HHHHHHHHHHcCCCCCCCCCHHHHHHHHcC--CcCCEeeccCCCcc--cccCHHHHHHHHHHcCCC-CCC-CCC
Confidence            58899999999765  46999999999998  77899988765433  359999999999999999 888 887


No 2  
>PF14368 LTP_2:  Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=99.63  E-value=2.7e-17  Score=107.61  Aligned_cols=68  Identities=28%  Similarity=0.564  Sum_probs=46.9

Q ss_pred             CcccC---ccCCCCCCCCCCHHHHHHHHhcC-CCCCccccccccchhhccCCChHHHhhhhccCCCCCCCCCCCC
Q 043659           36 KLSPC---ATAPQDEKVPVSAGCRRNVQRIG-QNPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNITKLPADYVC  106 (112)
Q Consensus        36 ~L~pC---~~~~~~~~~~Ps~~CC~~vk~~~-~~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi~~~p~~~~C  106 (112)
                      +|.||   +.|+. ++..||++||+++|++. .|..|+|.+++++....+|||++++..||++||++ +|+ ++|
T Consensus        25 ~l~~c~~~~~~~~-~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~-~~~-~~C   96 (96)
T PF14368_consen   25 SLLPCCPCLCYVT-GGPAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVP-VPP-SKC   96 (96)
T ss_dssp             CCCHH--HHHHHC-C-----HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS--S-----
T ss_pred             HHhccccchhccC-CCCCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCC-CCC-CCC
Confidence            56777   67776 45799999999999974 47999999998765456789999999999999999 777 777


No 3  
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=99.59  E-value=2.6e-16  Score=102.91  Aligned_cols=78  Identities=24%  Similarity=0.520  Sum_probs=59.6

Q ss_pred             CCCCCCccccccCcccCccCCCCCCCCCCHHHHHHHHhcCC------CCCccccccccchhhccCCChHHHhhhhccCCC
Q 043659           24 ECGTSSPDDEAMKLSPCATAPQDEKVPVSAGCRRNVQRIGQ------NPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNI   97 (112)
Q Consensus        24 ~C~~~~~~~~~~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~------~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi   97 (112)
                      +|+++.     ..|.||++|++++...|+++||+++++++.      |..|+|..+++...+..+||+++|++||++||+
T Consensus         2 ~C~~v~-----~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~~i~~~~a~~LP~~C~v   76 (89)
T cd01960           2 SCGQVT-----SLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGISGLNPGRAAGLPGKCGV   76 (89)
T ss_pred             CHHHHH-----hhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccCCCCHHHHHhChHhccc
Confidence            466555     589999999998778999999999999863      345666666654444345999999999999999


Q ss_pred             CC---CCCCCCC
Q 043659           98 TK---LPADYVC  106 (112)
Q Consensus        98 ~~---~p~~~~C  106 (112)
                      +.   +.+.++|
T Consensus        77 ~~~~~i~~~~dC   88 (89)
T cd01960          77 SIPYPISPSTDC   88 (89)
T ss_pred             CCCCCCCCCCCC
Confidence            95   3344555


No 4  
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=99.55  E-value=3.2e-15  Score=93.65  Aligned_cols=61  Identities=28%  Similarity=0.508  Sum_probs=54.2

Q ss_pred             cCcccCccCCCCCCCCCCHHHHHHHHhcCCCCCccccccccchhhccCCChHHHhhhhccCCCCCCC
Q 043659           35 MKLSPCATAPQDEKVPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNITKLP  101 (112)
Q Consensus        35 ~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi~~~p  101 (112)
                      ++|++|++|++++ .+||++||+.+|+.  + .|+|+|++++..+.+ ||.++|++||++||++ +|
T Consensus         4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~~--~-~CLC~y~~~p~l~~~-i~~~~A~~l~~~Cgv~-~P   64 (66)
T cd01959           4 TQLSPCLPAILGG-SPPSAACCAKLKEQ--Q-SCLCQYAKNPSLKQY-VNSPNARKVLAACGVP-YP   64 (66)
T ss_pred             hhcccCHHHHhCC-CCCCHHHHHHHhcC--C-CCeeeeecCccHHhh-cCcHHHHHHHHHcCCC-CC
Confidence            5899999999865 59999999999996  4 899999988776666 8999999999999999 76


No 5  
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=99.51  E-value=6e-15  Score=90.36  Aligned_cols=61  Identities=26%  Similarity=0.618  Sum_probs=53.1

Q ss_pred             cccCccCCCCCCCCCCHHHHHHHHhcC-CCCCccccccccchhhccCC-ChHHHhhhhccCCC
Q 043659           37 LSPCATAPQDEKVPVSAGCRRNVQRIG-QNPNCLCAVLLSDTAKLSGV-KPQVAITIPKRCNI   97 (112)
Q Consensus        37 L~pC~~~~~~~~~~Ps~~CC~~vk~~~-~~~~ClC~~l~~~~~~~~~v-n~~~a~~LP~~Cgi   97 (112)
                      |.||++|++++...||++||++++++. .++.|+|.++++.....+++ |.++++.||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            579999999877799999999999986 36899999998776665566 79999999999996


No 6  
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=99.10  E-value=5e-11  Score=73.95  Aligned_cols=69  Identities=23%  Similarity=0.529  Sum_probs=54.7

Q ss_pred             cCcccCccCCCCC--CCCCCHHHHHHHHhcCCCCCccccccccchhhccC---CChHHHhhhhccCCCCCCCCCCCC
Q 043659           35 MKLSPCATAPQDE--KVPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLSG---VKPQVAITIPKRCNITKLPADYVC  106 (112)
Q Consensus        35 ~~L~pC~~~~~~~--~~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~---vn~~~a~~LP~~Cgi~~~p~~~~C  106 (112)
                      .++.+|.+|+++.  ...|+.+||++++++. +..|+|..+........+   ++..+|.+||+.||+. .++ +.|
T Consensus         6 ~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~-~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~-~~~-~~C   79 (79)
T smart00499        6 LQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN-SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVP-PPY-TDC   79 (79)
T ss_pred             hhHHhhHHHHcCCCCCCCCchHHHHHHHHhc-ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCC-CCC-CCC
Confidence            4677999999876  4689999999999996 689999887654333332   5999999999999999 554 444


No 7  
>PF00234 Tryp_alpha_amyl:  Protease inhibitor/seed storage/LTP family This is a small subfamily;  InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=98.84  E-value=5.1e-11  Score=77.25  Aligned_cols=67  Identities=25%  Similarity=0.547  Sum_probs=55.2

Q ss_pred             CcccCccCCCCCCCCCCHHHHHHHHhcCCCCCccccccccchhhc----------cCCChHHHhhhhccCCCCCCCCCCC
Q 043659           36 KLSPCATAPQDEKVPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKL----------SGVKPQVAITIPKRCNITKLPADYV  105 (112)
Q Consensus        36 ~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~----------~~vn~~~a~~LP~~Cgi~~~p~~~~  105 (112)
                      .+.+|..|++++...|+..||++|+++  +..|.|..+.......          .+++..+|..||++||++ .|. ++
T Consensus        14 ~l~~c~~~~~~~~~~~~~~CC~~L~~l--~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~-~~~-~~   89 (90)
T PF00234_consen   14 RLSPCLPYLQGGCQQPSQQCCQQLRQL--DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVS-PPY-TD   89 (90)
T ss_dssp             HHHGGHHHHTTSSSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSS-SSS-S-
T ss_pred             cccccHHHHhcccccchHHHhHHHHHH--hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCC-CCC-CC
Confidence            588999999987678999999999999  8999999887544431          258899999999999999 554 45


Q ss_pred             C
Q 043659          106 C  106 (112)
Q Consensus       106 C  106 (112)
                      |
T Consensus        90 C   90 (90)
T PF00234_consen   90 C   90 (90)
T ss_dssp             G
T ss_pred             C
Confidence            4


No 8  
>PF14547 Hydrophob_seed:  Hydrophobic seed protein
Probab=96.65  E-value=0.00056  Score=44.80  Aligned_cols=72  Identities=22%  Similarity=0.477  Sum_probs=48.8

Q ss_pred             cCcccCccCCC----CCCCCCCHHHHHHHHhcCC-C-CCccccccccchhhccCCC-hHHHhhhhccCCCCCCCCCCCCC
Q 043659           35 MKLSPCATAPQ----DEKVPVSAGCRRNVQRIGQ-N-PNCLCAVLLSDTAKLSGVK-PQVAITIPKRCNITKLPADYVCG  107 (112)
Q Consensus        35 ~~L~pC~~~~~----~~~~~Ps~~CC~~vk~~~~-~-~~ClC~~l~~~~~~~~~vn-~~~a~~LP~~Cgi~~~p~~~~C~  107 (112)
                      .+|.-|.+.+.    ..+.++.++||+-++.+.+ | ..|+|..++.......++| +-....|-..||.. .|.||+|.
T Consensus         7 lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i~~~ipv~l~~lln~CGk~-~p~gf~C~   85 (85)
T PF14547_consen    7 LKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLINVNIPVALNLLLNACGKT-VPSGFTCP   85 (85)
T ss_pred             hhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhcccccccccccHHHHHHHHhCCc-CcCCCcCC
Confidence            36777877651    1234688999999999974 2 6999976654322212222 23566777889999 89999993


No 9  
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=96.46  E-value=0.0025  Score=41.75  Aligned_cols=67  Identities=21%  Similarity=0.519  Sum_probs=46.3

Q ss_pred             CcccCccCCCC----CCCCCCHHHHHHHHhcCC--CCCccccccccchhhccCCC---hHHHhhhhccCCCCCCCCCCCC
Q 043659           36 KLSPCATAPQD----EKVPVSAGCRRNVQRIGQ--NPNCLCAVLLSDTAKLSGVK---PQVAITIPKRCNITKLPADYVC  106 (112)
Q Consensus        36 ~L~pC~~~~~~----~~~~Ps~~CC~~vk~~~~--~~~ClC~~l~~~~~~~~~vn---~~~a~~LP~~Cgi~~~p~~~~C  106 (112)
                      +|.-|..-+..    -+.+|.++||+-++.+.+  -..|+|..++..   .+||+   +-+..-|-..||.. +|.||+|
T Consensus        10 kLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan---~lgi~~~~pv~l~llln~CGk~-~P~gf~C   85 (85)
T cd01958          10 KLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN---ILGISINIPVALSLLLNSCGRN-VPPGFTC   85 (85)
T ss_pred             HhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc---ccCcccccChhHHHHHHHHcCc-CCCCCcC
Confidence            56666664421    134777999999999874  369999776542   34554   33445555679999 9999998


No 10 
>cd00261 AAI_SS AAI_SS: Alpha-Amylase Inhibitors (AAIs) and Seed Storage (SS) Protein subfamily; composed of cereal-type AAIs and SS proteins. They are mainly present in the seeds of a variety of plants. AAIs play an important role in the natural defenses of plants against insects and pathogens such as fungi, bacteria and viruses. AAIs impede the digestion of plant starch and proteins by inhibiting digestive alpha-amylases and proteinases. Also included in this subfamily are SS proteins such as 2S albumin, gamma-gliadin, napin, and prolamin. These AAIs and SS proteins are also known allergens in humans.
Probab=74.31  E-value=1.4  Score=29.11  Aligned_cols=45  Identities=22%  Similarity=0.435  Sum_probs=32.7

Q ss_pred             CHHHHHHHHhcCCCCCccccccccchhhcc---C------------CChHHHhhhhccCCCC
Q 043659           52 SAGCRRNVQRIGQNPNCLCAVLLSDTAKLS---G------------VKPQVAITIPKRCNIT   98 (112)
Q Consensus        52 s~~CC~~vk~~~~~~~ClC~~l~~~~~~~~---~------------vn~~~a~~LP~~Cgi~   98 (112)
                      ...||.-++.+  +..|.|..+........   +            .-...|..||..||+.
T Consensus        44 ~qqCCqqL~~i--~~qcrC~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lp~~C~~~  103 (110)
T cd00261          44 RQQCCQQLAQI--PEQCRCEALRQMVQGVIQQQQQQQEQQQGQEVERMRQAAQNLPSMCNLY  103 (110)
T ss_pred             HHHHHHHHHhC--cHhhhHHHHHHHHHHHHHhhhccccccCcChHHHHHHHHHhhchhcCCC
Confidence            47899999999  78999988752211110   1            1245899999999998


No 11 
>PF05617 Prolamin_like:  Prolamin-like;  InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana.
Probab=44.75  E-value=17  Score=21.89  Aligned_cols=21  Identities=14%  Similarity=0.509  Sum_probs=17.9

Q ss_pred             CCCCHHHHHHHHhcCCCCCcccc
Q 043659           49 VPVSAGCRRNVQRIGQNPNCLCA   71 (112)
Q Consensus        49 ~~Ps~~CC~~vk~~~~~~~ClC~   71 (112)
                      ...+++||.++.++  +..|.=.
T Consensus        26 ~~i~~~CC~~i~~~--g~~C~~~   46 (70)
T PF05617_consen   26 KNIGPECCKAINKM--GKDCHPA   46 (70)
T ss_pred             CCCChHHHHHHHHH--hHhHHHH
Confidence            68999999999999  6788765


Done!