Query 043659
Match_columns 112
No_of_seqs 107 out of 714
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 12:02:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043659.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043659hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rkn_A DIR1 protein, AT5G48485 99.7 3.2E-19 1.1E-23 113.4 1.4 73 22-102 2-75 (77)
2 2ljo_A Non-specific lipid-tran 99.6 2E-18 6.9E-23 113.7 -4.2 81 22-108 1-90 (93)
3 1afh_A Maize nonspecific lipid 99.6 3.3E-17 1.1E-21 107.6 -2.1 78 23-108 2-91 (93)
4 1siy_A LTP 1, NS-LTP1, nonspec 99.6 7.4E-17 2.5E-21 105.5 -0.5 76 24-108 2-89 (91)
5 1bwo_A NS-LTP1, nonspecific li 99.6 2.2E-17 7.6E-22 107.9 -3.9 69 35-107 8-88 (90)
6 1l6h_A LTP2, non-specific lipi 99.6 1.8E-16 6.1E-21 99.0 0.1 64 35-107 6-69 (69)
7 1n89_A Lipid transfer protein; 99.6 3.6E-16 1.2E-20 97.1 1.2 61 35-101 5-65 (67)
8 1t12_A LTP 1, nonspecific lipi 99.6 7.2E-17 2.5E-21 105.7 -2.6 76 23-108 2-89 (91)
9 2alg_A Non-specific lipid tran 99.5 1.3E-16 4.5E-21 104.5 -3.8 76 23-107 2-89 (92)
10 1hyp_A Hydrophobic protein fro 96.5 0.00076 2.6E-08 42.8 1.3 65 36-107 10-78 (80)
11 2lvf_A 2S albumin; allergen, c 94.9 0.0084 2.9E-07 40.1 1.3 44 53-98 47-101 (114)
12 3ob4_A Conglutin, maltose ABC 94.3 0.002 7E-08 51.4 -3.3 49 53-102 429-486 (500)
13 1bea_A Bifunctional amylase/se 91.8 0.16 5.3E-06 34.6 3.5 68 36-106 16-115 (127)
14 2ds2_B Sweet protein mabinlin- 91.3 0.059 2E-06 33.1 0.9 45 52-98 7-62 (72)
15 1w2q_A Conglutin, ARA H 6; all 90.6 0.19 6.5E-06 34.1 3.0 46 53-98 58-112 (127)
16 1psy_A 2S albumin, RICC3; albu 90.6 0.057 1.9E-06 36.6 0.3 43 53-97 64-116 (125)
17 1hss_A 0.19 alpha-amylase inhi 90.0 0.038 1.3E-06 37.6 -0.9 63 36-101 16-104 (124)
18 1b1u_A Protein (alpha-amylase/ 89.9 0.11 3.9E-06 35.0 1.4 66 36-104 16-111 (122)
19 1pnb_B Napin BNIB; napin IA an 89.9 0.058 2E-06 33.3 -0.1 47 50-98 9-65 (75)
20 1s6d_A Albumin 8; all helix, f 88.8 0.23 8E-06 32.4 2.3 60 37-98 21-97 (103)
21 1sm7_A Recombinant IB pronapin 81.9 0.3 1E-05 31.9 0.2 45 52-98 45-99 (109)
No 1
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.74 E-value=3.2e-19 Score=113.39 Aligned_cols=73 Identities=29% Similarity=0.492 Sum_probs=63.0
Q ss_pred cCCCCCCCccccccCcccCccCCCCC-CCCCCHHHHHHHHhcCCCCCccccccccchhhccCCChHHHhhhhccCCCCCC
Q 043659 22 AGECGTSSPDDEAMKLSPCATAPQDE-KVPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNITKL 100 (112)
Q Consensus 22 ~~~C~~~~~~~~~~~L~pC~~~~~~~-~~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi~~~ 100 (112)
..+|+++. .+|+||++|++++ ...||++||++||+. |+.|+|.+++++..+.+|||+++|++||++||++ +
T Consensus 2 ~~~C~~~~-----~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~--~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~-~ 73 (77)
T 2rkn_A 2 IDLCGMSQ-----DELNECKPAVSKENPTSPSQPCCTALQHA--DFACLCGYKNSPWLGSFGVDPELASALPKQCGLA-N 73 (77)
T ss_dssp CCBTTBCH-----HHHHHHGGGGBSSSCCCCCHHHHHHHTTC--CHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCS-C
T ss_pred cchHHhHH-----HhHhhCHHHHcCCCCCCCCHHHHHHHHhc--CcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCC-C
Confidence 45788766 5899999999973 468999999999986 7899999988766677799999999999999999 7
Q ss_pred CC
Q 043659 101 PA 102 (112)
Q Consensus 101 p~ 102 (112)
|+
T Consensus 74 p~ 75 (77)
T 2rkn_A 74 AP 75 (77)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 2
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.64 E-value=2e-18 Score=113.70 Aligned_cols=81 Identities=22% Similarity=0.442 Sum_probs=64.4
Q ss_pred cCCCCCCCccccccCcccCccCCCCCCCCCCHHHHHHHHhcCC------CCCccccccccchhhccCCChHHHhhhhccC
Q 043659 22 AGECGTSSPDDEAMKLSPCATAPQDEKVPVSAGCRRNVQRIGQ------NPNCLCAVLLSDTAKLSGVKPQVAITIPKRC 95 (112)
Q Consensus 22 ~~~C~~~~~~~~~~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~------~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~C 95 (112)
+.+|+++. ..|+||++|+++++ .|++.||+++|++++ |+.|+|..+++......+||.++|.+||++|
T Consensus 1 AisC~~v~-----~~L~pCl~Yv~g~~-~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~C 74 (93)
T 2ljo_A 1 AISCGAVT-----SDLSPCLTYLTGGP-GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKC 74 (93)
T ss_dssp CCSSHHHH-----HHHHHHHHHHTTSS-CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHH
T ss_pred CCCHHHHH-----HHHHhHHHHHcCCC-CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhc
Confidence 35788766 59999999999754 799999999999963 4678887787655555689999999999999
Q ss_pred CCCC-CC--CCCCCCC
Q 043659 96 NITK-LP--ADYVCGP 108 (112)
Q Consensus 96 gi~~-~p--~~~~C~~ 108 (112)
|+++ || +.++|+.
T Consensus 75 gV~~p~~Is~~~dC~~ 90 (93)
T 2ljo_A 75 GVNIPYKISTTTNCNT 90 (93)
T ss_dssp TCCCSSCCSTTCCGGG
T ss_pred CCCCCCCCCCCCCCCC
Confidence 9994 33 6677854
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.59 E-value=3.3e-17 Score=107.61 Aligned_cols=78 Identities=23% Similarity=0.544 Sum_probs=60.9
Q ss_pred CCCCCCCccccccCcccCccCCCCCCCCCCHHHHHHHHhcCC------C--CCccccccccchhhcc-CCChHHHhhhhc
Q 043659 23 GECGTSSPDDEAMKLSPCATAPQDEKVPVSAGCRRNVQRIGQ------N--PNCLCAVLLSDTAKLS-GVKPQVAITIPK 93 (112)
Q Consensus 23 ~~C~~~~~~~~~~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~------~--~~ClC~~l~~~~~~~~-~vn~~~a~~LP~ 93 (112)
.+|+++. .+|+||++|+++++..|+++||++||++++ | ..|+|.+ . ....+ +||+++|++||+
T Consensus 2 ~~C~~v~-----~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~--~-~~~~~~~in~~~A~~LP~ 73 (93)
T 1afh_A 2 ISCGQVA-----SAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLK--N-AAAGVSGLNAGNAASIPS 73 (93)
T ss_dssp CSSHHHH-----HHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHH--H-HHTTSTTCCHHHHHHHHH
T ss_pred CChHHHH-----HhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeec--c-ccccccCcCHHHHHHHHH
Confidence 4677665 589999999998777899999999999952 2 5899953 2 22333 899999999999
Q ss_pred cCCCCC---CCCCCCCCC
Q 043659 94 RCNITK---LPADYVCGP 108 (112)
Q Consensus 94 ~Cgi~~---~p~~~~C~~ 108 (112)
+||++. +.+.++|+.
T Consensus 74 ~C~v~~p~~is~~~dC~~ 91 (93)
T 1afh_A 74 KCGVSIPYTISTSTDCSR 91 (93)
T ss_dssp HHHCCCSSCCSTTCCSSS
T ss_pred HcCCCCCCCCCCCCCCcc
Confidence 999985 456677754
No 4
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.59 E-value=7.4e-17 Score=105.55 Aligned_cols=76 Identities=25% Similarity=0.536 Sum_probs=60.6
Q ss_pred CCCCCCccccccCcccCccCCCCCCCCCCHHHHHHHHhcCC------C--CCccccccccchhhcc-CCChHHHhhhhcc
Q 043659 24 ECGTSSPDDEAMKLSPCATAPQDEKVPVSAGCRRNVQRIGQ------N--PNCLCAVLLSDTAKLS-GVKPQVAITIPKR 94 (112)
Q Consensus 24 ~C~~~~~~~~~~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~------~--~~ClC~~l~~~~~~~~-~vn~~~a~~LP~~ 94 (112)
+|+++. ..|+||++|+++++. |+++||++||++++ | ..|+|. ++ .++.+ +||+++|++||++
T Consensus 2 ~C~~v~-----~~L~pCl~yv~~~~~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~-~~~~~~~in~~~A~~LP~~ 72 (91)
T 1siy_A 2 TCGQVQ-----GNLAQCIGFLQKGGV-VPPSCCTGVKNILNSSRTTADRRAVCSCL--KA-AAGAVRGINPNNAEALPGK 72 (91)
T ss_dssp CTTTTH-----HHHHHHHHHHTSCSC-CCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HH-HTTCCSSCCHHHHHHHHHH
T ss_pred CHHHHH-----HhccCcHHHHhCCCC-CcHHHHHHHHHHHhhhccCCCCCcCCccc--CC-cccccCCcCHHHHHHHHHH
Confidence 588766 589999999998764 99999999999853 2 489994 33 34555 7999999999999
Q ss_pred CCCCC---CCCCCCCCC
Q 043659 95 CNITK---LPADYVCGP 108 (112)
Q Consensus 95 Cgi~~---~p~~~~C~~ 108 (112)
||++. +.+.++|+.
T Consensus 73 Cgv~~p~~is~~~dC~~ 89 (91)
T 1siy_A 73 CGVNIPYKISTSTNCNS 89 (91)
T ss_dssp HTCCCSSCSCTTSCSST
T ss_pred cCCCCCCCCCCCCCCcc
Confidence 99985 456777754
No 5
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.58 E-value=2.2e-17 Score=107.90 Aligned_cols=69 Identities=22% Similarity=0.445 Sum_probs=54.7
Q ss_pred cCcccCccCCCCCCCCCCHHHHHHHHhcCC--------CCCccccccccchhhcc-CCChHHHhhhhccCCCCC---CCC
Q 043659 35 MKLSPCATAPQDEKVPVSAGCRRNVQRIGQ--------NPNCLCAVLLSDTAKLS-GVKPQVAITIPKRCNITK---LPA 102 (112)
Q Consensus 35 ~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~--------~~~ClC~~l~~~~~~~~-~vn~~~a~~LP~~Cgi~~---~p~ 102 (112)
.+|+||++|+++++. |+++||++||++++ +..|+| +++ .+..+ +||+++|++||++||++. +.+
T Consensus 8 ~~L~pCl~y~~~~~~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~-~~~~~~~in~~~A~~LP~~C~v~~p~~is~ 83 (90)
T 1bwo_A 8 SLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKG-IARGIHNLNEDNARSIPPKCGVNLPYTISL 83 (90)
T ss_dssp HHHGGGHHHHTTCSC-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHH-HHTTCTTCCHHHHHTHHHHHTCCCSSCCCT
T ss_pred HhhcccHHHHcCCCC-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccC-chhccCCcCHHHHHHHHHHcCCCCCCCCCC
Confidence 589999999998765 99999999999852 258999 443 33444 799999999999999985 345
Q ss_pred CCCCC
Q 043659 103 DYVCG 107 (112)
Q Consensus 103 ~~~C~ 107 (112)
+++|+
T Consensus 84 ~~dC~ 88 (90)
T 1bwo_A 84 NIDCS 88 (90)
T ss_dssp TCCGG
T ss_pred CCCCC
Confidence 56664
No 6
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.57 E-value=1.8e-16 Score=99.00 Aligned_cols=64 Identities=22% Similarity=0.386 Sum_probs=55.2
Q ss_pred cCcccCccCCCCCCCCCCHHHHHHHHhcCCCCCccccccccchhhccCCChHHHhhhhccCCCCCCCCCCCCC
Q 043659 35 MKLSPCATAPQDEKVPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNITKLPADYVCG 107 (112)
Q Consensus 35 ~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi~~~p~~~~C~ 107 (112)
++|.||++|++++ .+||++||++||+. ..|+|.|++++.... +||.++|++||++||++ +| +||
T Consensus 6 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~---~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~-~P---~C~ 69 (69)
T 1l6h_A 6 GQLTVCTGAIAGG-ARPTAACCSSLRAQ---QGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIA-LP---TCH 69 (69)
T ss_dssp TTHHHHHHHHTTC-CSTTHHHHHHHHHH---HHHHHHHTTCSSHHH-HTTTTTGGGCCCCCSSC-SC---CCC
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC---CCCCCccccCccccc-ccCHHHHHHHHHHcCCC-CC---CCC
Confidence 5889999999976 48999999999986 799999988765543 59999999999999999 76 675
No 7
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.57 E-value=3.6e-16 Score=97.11 Aligned_cols=61 Identities=21% Similarity=0.378 Sum_probs=53.3
Q ss_pred cCcccCccCCCCCCCCCCHHHHHHHHhcCCCCCccccccccchhhccCCChHHHhhhhccCCCCCCC
Q 043659 35 MKLSPCATAPQDEKVPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLSGVKPQVAITIPKRCNITKLP 101 (112)
Q Consensus 35 ~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~vn~~~a~~LP~~Cgi~~~p 101 (112)
++|+||++|++++ .+||++||++||+. ..|+|.|++++.... +||.++|++||++||++ +|
T Consensus 5 ~~L~pC~~~v~~~-~~Ps~~CC~~lk~~---~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~-~P 65 (67)
T 1n89_A 5 SQLAVCASAILSG-AKPSGECCGNLRAQ---QGCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLA-VP 65 (67)
T ss_dssp STTHHHHHHHTTC-CCCCHHHHHHHHHH---SSHHHHGGGCSTTHH-HHTCHHHHHHHHHHTSC-CS
T ss_pred hhcccCHHHHcCC-CCCCHHHHHhhCCC---CCCCCccccCccccc-ccCHHHHHHHHHHcCCC-CC
Confidence 5889999999976 48999999999986 799999988765543 59999999999999999 76
No 8
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.56 E-value=7.2e-17 Score=105.70 Aligned_cols=76 Identities=21% Similarity=0.462 Sum_probs=59.5
Q ss_pred CCCCCCCccccccCcccCccCCCCCCCCCCHHHHHHHHhcCC--------CCCccccccccchhhcc-CCChHHHhhhhc
Q 043659 23 GECGTSSPDDEAMKLSPCATAPQDEKVPVSAGCRRNVQRIGQ--------NPNCLCAVLLSDTAKLS-GVKPQVAITIPK 93 (112)
Q Consensus 23 ~~C~~~~~~~~~~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~--------~~~ClC~~l~~~~~~~~-~vn~~~a~~LP~ 93 (112)
.+|+++. ..|+||++|+++++. |+ +||++||++++ +..|+|. ++ .+..+ +||+++|++||+
T Consensus 2 ~~C~~v~-----~~L~pCl~y~~~~~~-P~-~CC~gv~~l~~~a~t~~dr~~~ClCl--k~-~~~~~~~in~~~A~~LP~ 71 (91)
T 1t12_A 2 ITCGQVT-----SNLAPCLAYLRNTGP-LG-RCCGGVKALVNSARTTEDRQIACTCL--KS-AAGAISGINLGKAAGLPS 71 (91)
T ss_dssp CCHHHHH-----HHTHHHHHHHTTSSC-CT-THHHHHHHHHHTTCSTHHHHHHHHHH--HH-HHHHCTTCCHHHHHHHHH
T ss_pred CChHHHH-----HhccCcHHHHcCCCC-hH-HHHHHHHHHHhhccCCCCCCccCCCc--cc-cccccCCcChhHHHHHHH
Confidence 4566655 589999999998776 88 99999999863 2699993 33 34445 899999999999
Q ss_pred cCCCCC---CCCCCCCCC
Q 043659 94 RCNITK---LPADYVCGP 108 (112)
Q Consensus 94 ~Cgi~~---~p~~~~C~~ 108 (112)
+||++. +.+.++|+.
T Consensus 72 ~C~v~~p~~is~~~dC~~ 89 (91)
T 1t12_A 72 TCGVNIPYKISPSTDCSK 89 (91)
T ss_dssp HTTCCCSSCSSSSSCCTT
T ss_pred HcCCCCCCCCCCCCCCcc
Confidence 999985 456677754
No 9
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.52 E-value=1.3e-16 Score=104.53 Aligned_cols=76 Identities=24% Similarity=0.571 Sum_probs=58.4
Q ss_pred CCCCCCCccccccCcccCccCCCCCCCCCCHHHHHHHHhcCC------C--CCccccccccchhhcc-CCChHHHhhhhc
Q 043659 23 GECGTSSPDDEAMKLSPCATAPQDEKVPVSAGCRRNVQRIGQ------N--PNCLCAVLLSDTAKLS-GVKPQVAITIPK 93 (112)
Q Consensus 23 ~~C~~~~~~~~~~~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~------~--~~ClC~~l~~~~~~~~-~vn~~~a~~LP~ 93 (112)
.+|+++. .+|+||++|+++++ +|+++||++||++++ | ..|+|.+. ....+ +||+++|++||+
T Consensus 2 ~~C~~v~-----~~L~pCl~y~~~~~-~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~---~~~~~~~in~~~A~~LP~ 72 (92)
T 2alg_A 2 ITCGQVS-----SSLAPCIPYVRGGG-AVPPACCNGIRNVNNLARTTPDRQAACNCLKQ---LSASVPGVNPNNAAALPG 72 (92)
T ss_dssp CCHHHHH-----HHHGGGHHHHHHCS-CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHH---HHHHSTTCCHHHHHHHHH
T ss_pred CChHHHH-----HhccCcHHHHcCCC-CCCHHHHHHHHHHHhhhcccCCCCcCCccccC---cccccCccChHHHHHHHH
Confidence 3566554 58999999999765 688999999999851 2 68999643 23334 899999999999
Q ss_pred cCCCCC---CCCCCCCC
Q 043659 94 RCNITK---LPADYVCG 107 (112)
Q Consensus 94 ~Cgi~~---~p~~~~C~ 107 (112)
+||++. +.++++|+
T Consensus 73 ~Cgv~~p~~is~~~dC~ 89 (92)
T 2alg_A 73 KCGVSIPYKISASTNCA 89 (92)
T ss_dssp HTTCCCSSCSSTTSCGG
T ss_pred HcCCCCCCCCCCCCCCc
Confidence 999985 34566664
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=96.53 E-value=0.00076 Score=42.76 Aligned_cols=65 Identities=22% Similarity=0.433 Sum_probs=46.6
Q ss_pred CcccCccCCCCCCCCCCHHHHHHHHhcCC--CCCccccccccchhhccC-CChHHHhh-hhccCCCCCCCCCCCCC
Q 043659 36 KLSPCATAPQDEKVPVSAGCRRNVQRIGQ--NPNCLCAVLLSDTAKLSG-VKPQVAIT-IPKRCNITKLPADYVCG 107 (112)
Q Consensus 36 ~L~pC~~~~~~~~~~Ps~~CC~~vk~~~~--~~~ClC~~l~~~~~~~~~-vn~~~a~~-LP~~Cgi~~~p~~~~C~ 107 (112)
+|.-|.+-+. +...|..+||+-++.+.+ -..|+|..++ .+| +|...+.+ |-..||.. .|+||+|-
T Consensus 10 kLgvCanvL~-g~~~~~~~CC~Ll~GL~dleAAvCLCtaik-----~Lgilnlpv~L~llln~Cgk~-~P~gF~C~ 78 (80)
T 1hyp_A 10 DLSICLNILG-GSLGTVDDCCALIGGLGDIEAIVCLCIQLR-----ALGILNLNRNLQLILNSCGRS-YPSNATCP 78 (80)
T ss_dssp CCGGGGGGGG-TCCTTHHHHHHHHHTSCHHHHHHHHHHHHH-----HHTCSCHHHHHHHHHHHTTCS-SCCCCCCS
T ss_pred chhHHHHHhC-cCCCCCCccchhhhCcchhhhhhhhhhhcc-----ccceeecChhHHHHHHHhCCc-CcCCCCCC
Confidence 4567877553 333477899999999864 2699996553 234 47666666 45689999 99999995
No 11
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=94.89 E-value=0.0084 Score=40.07 Aligned_cols=44 Identities=23% Similarity=0.480 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCCCCCccccccccchhh---ccC-CC-------hHHHhhhhccCCCC
Q 043659 53 AGCRRNVQRIGQNPNCLCAVLLSDTAK---LSG-VK-------PQVAITIPKRCNIT 98 (112)
Q Consensus 53 ~~CC~~vk~~~~~~~ClC~~l~~~~~~---~~~-vn-------~~~a~~LP~~Cgi~ 98 (112)
..||+-|+.+ +..|.|..|...+.. ..+ +- ...|..||..||+.
T Consensus 47 ~~CC~qL~qv--~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~~C~i~ 101 (114)
T 2lvf_A 47 SECCEQLEGM--DESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS 101 (114)
T ss_dssp HHHHHHHHHS--CHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHC--CcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChHhcCCC
Confidence 4599999999 899999988643322 111 11 56899999999998
No 12
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=94.32 E-value=0.002 Score=51.41 Aligned_cols=49 Identities=18% Similarity=0.496 Sum_probs=34.6
Q ss_pred HHHHHHHHhcCCCCCccccccccchhhccC--------CC-hHHHhhhhccCCCCCCCC
Q 043659 53 AGCRRNVQRIGQNPNCLCAVLLSDTAKLSG--------VK-PQVAITIPKRCNITKLPA 102 (112)
Q Consensus 53 ~~CC~~vk~~~~~~~ClC~~l~~~~~~~~~--------vn-~~~a~~LP~~Cgi~~~p~ 102 (112)
.+||+-|+.+.+.+.|.|..+........+ -- ..+|..||..||+. .|.
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~-~~~ 486 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLR-APQ 486 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCC-CCS
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCC-CCc
Confidence 799999999932279999887653332111 01 34599999999998 554
No 13
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=91.78 E-value=0.16 Score=34.61 Aligned_cols=68 Identities=21% Similarity=0.299 Sum_probs=44.7
Q ss_pred CcccCccCCCC-----CCCCC----CHHHHHHHHhcCCCCCccccccccchhhcc---------C---CC--------hH
Q 043659 36 KLSPCATAPQD-----EKVPV----SAGCRRNVQRIGQNPNCLCAVLLSDTAKLS---------G---VK--------PQ 86 (112)
Q Consensus 36 ~L~pC~~~~~~-----~~~~P----s~~CC~~vk~~~~~~~ClC~~l~~~~~~~~---------~---vn--------~~ 86 (112)
.|..|..|+.. +...| ...||.-++.+ +..|.|..|.......+ | .- ..
T Consensus 16 pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i--~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~ 93 (127)
T 1bea_A 16 PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRG 93 (127)
T ss_dssp CCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTS--CGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHH
T ss_pred cchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhc--CcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHH
Confidence 57789888752 12123 35699999999 89999987753321100 1 11 34
Q ss_pred HHhhh--hccCCCCCCCCCC-CC
Q 043659 87 VAITI--PKRCNITKLPADY-VC 106 (112)
Q Consensus 87 ~a~~L--P~~Cgi~~~p~~~-~C 106 (112)
.|..| |..||+. .++|. .|
T Consensus 94 ~A~~Lv~P~~Cnl~-~~~g~~~C 115 (127)
T 1bea_A 94 FAATLVTEAECNLA-TISGVAEC 115 (127)
T ss_dssp HHTTTTSTTTTCCC-CTTSSSCC
T ss_pred HHHhcCCcccCCCC-CCCCCCCC
Confidence 68999 9999998 55544 55
No 14
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=91.29 E-value=0.059 Score=33.14 Aligned_cols=45 Identities=22% Similarity=0.462 Sum_probs=33.6
Q ss_pred CHHHHHHHHhcCCCCCccccccccchhh---ccC--------CChHHHhhhhccCCCC
Q 043659 52 SAGCRRNVQRIGQNPNCLCAVLLSDTAK---LSG--------VKPQVAITIPKRCNIT 98 (112)
Q Consensus 52 s~~CC~~vk~~~~~~~ClC~~l~~~~~~---~~~--------vn~~~a~~LP~~Cgi~ 98 (112)
-..||+.++.+ +..|.|..+...... .-. =...+|..||..||+.
T Consensus 7 ~qqCC~eL~~~--~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~ 62 (72)
T 2ds2_B 7 LRQCCNQLRQV--DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIP 62 (72)
T ss_dssp HHHHHHHHTTS--CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHhc--CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCC
Confidence 36899999999 899999888653311 001 1267799999999998
No 15
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=90.58 E-value=0.19 Score=34.09 Aligned_cols=46 Identities=15% Similarity=0.488 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCCCCccccccccchhhc---c-C--CC---hHHHhhhhccCCCC
Q 043659 53 AGCRRNVQRIGQNPNCLCAVLLSDTAKL---S-G--VK---PQVAITIPKRCNIT 98 (112)
Q Consensus 53 ~~CC~~vk~~~~~~~ClC~~l~~~~~~~---~-~--vn---~~~a~~LP~~Cgi~ 98 (112)
..||+.|+.+.++..|.|..|...+-.. + + .. ..+|..||..||+.
T Consensus 58 qqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~A~~LP~~C~i~ 112 (127)
T 1w2q_A 58 QRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR 112 (127)
T ss_dssp HHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhHHhcCCC
Confidence 7899999998656899999887543111 1 1 12 45799999999994
No 16
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=90.55 E-value=0.057 Score=36.59 Aligned_cols=43 Identities=21% Similarity=0.404 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCCCccccccccchhh-----cc-CC----ChHHHhhhhccCCC
Q 043659 53 AGCRRNVQRIGQNPNCLCAVLLSDTAK-----LS-GV----KPQVAITIPKRCNI 97 (112)
Q Consensus 53 ~~CC~~vk~~~~~~~ClC~~l~~~~~~-----~~-~v----n~~~a~~LP~~Cgi 97 (112)
..||+.++.+ +..|.|..|...+.. .. |- -..+|..||..||+
T Consensus 64 qqCC~qL~~~--~~~C~C~aL~~~v~~~~qQgq~~gqq~~~~~q~A~~LP~~C~i 116 (125)
T 1psy_A 64 QQCCNQVKQV--RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV 116 (125)
T ss_dssp HHHHHHHTTC--CSSHHHHHHHHHHHHHHHHTTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhc--CcccccHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhHHHcCC
Confidence 7899999999 899999988654311 11 11 15678999999998
No 17
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=89.96 E-value=0.038 Score=37.58 Aligned_cols=63 Identities=21% Similarity=0.329 Sum_probs=42.0
Q ss_pred CcccCccCCCC---CCCCC---CHHHHHHHHhcCCCCCccccccccchh---hccC---------C--------ChHHHh
Q 043659 36 KLSPCATAPQD---EKVPV---SAGCRRNVQRIGQNPNCLCAVLLSDTA---KLSG---------V--------KPQVAI 89 (112)
Q Consensus 36 ~L~pC~~~~~~---~~~~P---s~~CC~~vk~~~~~~~ClC~~l~~~~~---~~~~---------v--------n~~~a~ 89 (112)
.|..|..|++. +...| ...||.-++.+ +..|.|..|..... +..| . -.+.|.
T Consensus 16 pL~~Cr~Yv~~~C~g~~~p~~~~~~CC~QL~~i--~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~~pgCrre~~~~~A~ 93 (124)
T 1hss_A 16 ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAQEGQAGTGAFPRCRREVVKLTAA 93 (124)
T ss_dssp CCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHTS--CTTTHHHHHHHHHHHHHHHC---------CCSTTCCHHHHHHHHT
T ss_pred cchHHHHHHHHHccCCCCcHHHHHHHHHHHHhc--CcccchHHHHHHHHhhhhhhhhhccccchhhccCCcHHHHHHHHH
Confidence 57788888752 12223 46799999999 79999987754321 1111 1 112689
Q ss_pred hhhccCCCCCCC
Q 043659 90 TIPKRCNITKLP 101 (112)
Q Consensus 90 ~LP~~Cgi~~~p 101 (112)
.||..||+. .+
T Consensus 94 ~LP~~Cnl~-~~ 104 (124)
T 1hss_A 94 SITAVCRLP-IV 104 (124)
T ss_dssp THHHHTTCC-EE
T ss_pred hchhhcCCC-CC
Confidence 999999999 55
No 18
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=89.95 E-value=0.11 Score=35.03 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=44.1
Q ss_pred CcccCccCCCCC-----CCCC----CHHHHHHHHhcCCCCCccccccccchhhcc-----------CCC--------hHH
Q 043659 36 KLSPCATAPQDE-----KVPV----SAGCRRNVQRIGQNPNCLCAVLLSDTAKLS-----------GVK--------PQV 87 (112)
Q Consensus 36 ~L~pC~~~~~~~-----~~~P----s~~CC~~vk~~~~~~~ClC~~l~~~~~~~~-----------~vn--------~~~ 87 (112)
.|..|..|+..- ...| ...||.-++.+ +..|.|..|.......+ +.- ...
T Consensus 16 ~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i--~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~ 93 (122)
T 1b1u_A 16 PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAF 93 (122)
T ss_dssp TTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHS--CHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHH
T ss_pred cchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhC--CccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHH
Confidence 577899987521 2223 45799999999 89999987753221111 111 146
Q ss_pred Hhhh--hccCCCCCCCCCC
Q 043659 88 AITI--PKRCNITKLPADY 104 (112)
Q Consensus 88 a~~L--P~~Cgi~~~p~~~ 104 (112)
|..| |..||+. .++|.
T Consensus 94 A~~Lv~P~~Cnl~-~~~g~ 111 (122)
T 1b1u_A 94 APKLVTEVECNLA-TIHGG 111 (122)
T ss_dssp GGGTTSTTTTCCC-CTTSS
T ss_pred HHhcCCcccCCCC-CCCCC
Confidence 8899 9999999 66554
No 19
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=89.90 E-value=0.058 Score=33.33 Aligned_cols=47 Identities=21% Similarity=0.450 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHhcCCCCCccccccccchhh-----ccC-----CChHHHhhhhccCCCC
Q 043659 50 PVSAGCRRNVQRIGQNPNCLCAVLLSDTAK-----LSG-----VKPQVAITIPKRCNIT 98 (112)
Q Consensus 50 ~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~-----~~~-----vn~~~a~~LP~~Cgi~ 98 (112)
..-..||+-++.+ +..|.|..+...... .++ -...+|..||..||+.
T Consensus 9 ~~~qqCC~qL~~~--~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~ 65 (75)
T 1pnb_B 9 WLREQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMK 65 (75)
T ss_dssp SCTHHHHHHHHTS--CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCT
T ss_pred HHHHHHHHHHHhC--CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCC
Confidence 4568999999999 899999887643211 111 1256788999999998
No 20
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=88.81 E-value=0.23 Score=32.36 Aligned_cols=60 Identities=15% Similarity=0.329 Sum_probs=42.1
Q ss_pred cccCccCCCCC------C------CCCCHHHHHHHHhcCCCCCccccccccchhhcc-CC----ChHHHhhhhccCCCC
Q 043659 37 LSPCATAPQDE------K------VPVSAGCRRNVQRIGQNPNCLCAVLLSDTAKLS-GV----KPQVAITIPKRCNIT 98 (112)
Q Consensus 37 L~pC~~~~~~~------~------~~Ps~~CC~~vk~~~~~~~ClC~~l~~~~~~~~-~v----n~~~a~~LP~~Cgi~ 98 (112)
|.+|..|+... . -..-..||+-++.+ +..|.|..+...+-..+ |- ...+|..||..||+.
T Consensus 21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~--~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~ 97 (103)
T 1s6d_A 21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL--DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM 97 (103)
T ss_dssp TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS--CGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc--CcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCC
Confidence 77888886531 1 13468999999999 89999988754331111 11 256789999999998
No 21
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=81.90 E-value=0.3 Score=31.90 Aligned_cols=45 Identities=22% Similarity=0.518 Sum_probs=32.4
Q ss_pred CHHHHHHHHhcCCCCCccccccccchhhc-----cC-----CChHHHhhhhccCCCC
Q 043659 52 SAGCRRNVQRIGQNPNCLCAVLLSDTAKL-----SG-----VKPQVAITIPKRCNIT 98 (112)
Q Consensus 52 s~~CC~~vk~~~~~~~ClC~~l~~~~~~~-----~~-----vn~~~a~~LP~~Cgi~ 98 (112)
-..||+.++.+ +..|.|..+....... ++ -...+|..||..||+.
T Consensus 45 ~qqCC~qL~~v--~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP~~Cnl~ 99 (109)
T 1sm7_A 45 REQCCNELYQE--DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMK 99 (109)
T ss_dssp HHHHHHHTTTT--CHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHHHHSCCC
T ss_pred HHHHHHHHHhc--CccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCHHhcCCC
Confidence 36899999999 8999998875432211 11 0244588999999998
Done!