BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043665
(132 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 98.6 bits (244), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 23/152 (15%)
Query: 2 ARAIATAFPDIKXXXXXXXXXXXXXXGTNNLEFFLE--FEAIPPANVVLLKWILHDWSDE 59
A+ I FP +K G+NNL + F +IP A+ VLLK+ILH+W+D+
Sbjct: 203 AKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDK 262
Query: 60 ESLRYLKKKCEESIPSN-----------------DEGRKTQ--LCFDLLMATFLNGKEGS 100
+ LR LKK C+E++ ++ DE + TQ L D+ MA LNGKE +
Sbjct: 263 DCLRILKK-CKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LNGKERN 320
Query: 101 VYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
+WKKLF+ AGF HYKI+P G SLIE YP
Sbjct: 321 EEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 95.1 bits (235), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 23/152 (15%)
Query: 2 ARAIATAFPDIKXXXXXXXXXXXXXXGTNNLEFFL--EFEAIPPANVVLLKWILHDWSDE 59
A+ I FP +K G+NNL + F +IP A+ VLLK+ILH+W+D+
Sbjct: 203 AKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLKYILHNWTDK 262
Query: 60 ESLRYLKKKCEESIPSN-----------------DEGRKTQ--LCFDLLMATFLNGKEGS 100
+ LR LKK C+E++ ++ DE + TQ L D+ A LNGKE +
Sbjct: 263 DCLRILKK-CKEAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVNXAC-LNGKERN 320
Query: 101 VYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
+WKKLF+ AGF HYKI+P G SLIE YP
Sbjct: 321 EEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 3 RAIATAFPDIKXXXXXXXXXXXXXXGTNNLEFFLE--FEAIPPANVVLLKWILHDWSDEE 60
+ I FP +K G NL F F++IP A+ VLLKW+LHDW+DE+
Sbjct: 209 KLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQ 268
Query: 61 SLRYLKKKCEE---------------SI--PSNDEG-RKTQLCFDLLMATFLNGKEGSVY 102
SL+ LK E SI S+D G + QL +DL+M T GKE +
Sbjct: 269 SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQ 328
Query: 103 DWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
+W+KL AGFS YKITP G SLIE YP
Sbjct: 329 EWEKLIYDAGFSSYKITPISGFKSLIEVYP 358
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 3 RAIATAFPDIKXXXXXXXXXXXXXXGTNNLEFFLE--FEAIPPANVVLLKWILHDWSDEE 60
+ I FP +K G NL F F++IP A+ VLLKW+LHDW+DE+
Sbjct: 208 KLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQ 267
Query: 61 SLRYLKKKCEE---------------SI--PSNDEG-RKTQLCFDLLMATFLNGKEGSVY 102
SL+ LK E SI S+D G + QL +DL+M T GKE +
Sbjct: 268 SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQ 327
Query: 103 DWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
+W+KL AGFS YKITP G SLIE YP
Sbjct: 328 EWEKLIYDAGFSSYKITPISGFKSLIEVYP 357
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 3 RAIATAFPDIKXXXXXXXXXXXXXXGTNNLEFFLE--FEAIPPANVVLLKWILHDWSDEE 60
+ I FP +K G NL F F++IP A+ VLLKW+LHDW+DE+
Sbjct: 205 KLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQ 264
Query: 61 SLRYLKKKCEE---------------SI--PSNDEG-RKTQLCFDLLMATFLNGKEGSVY 102
SL+ LK E SI S+D G + QL +DL+M T GKE +
Sbjct: 265 SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQ 324
Query: 103 DWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
+W+KL AGFS YKITP G SLIE YP
Sbjct: 325 EWEKLIYDAGFSSYKITPISGFKSLIEVYP 354
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 25/153 (16%)
Query: 2 ARAIATAFPDIKXXXXXXXXXXXXXXGTNNLEFFLE--FEAIPPANVVLLKWILHDWSDE 59
+ I FP + G+NNL + F ++P A+ VLLK +LHDW+D+
Sbjct: 208 GKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLKAVLHDWTDK 267
Query: 60 ESLRYLKKKCEESIPSN-----------------DEGRKTQLCFDLLM---ATFLNGKEG 99
+ ++ LKK C+E++ S+ DE + TQ+ LLM + +NGKE
Sbjct: 268 DCIKILKK-CKEAVTSDGKRGKVIVIDMVINEKKDENQLTQI--KLLMNVTISCVNGKER 324
Query: 100 SVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
+ +WKKLF+ AGF YKI+P GL SLIE YP
Sbjct: 325 NEEEWKKLFIEAGFQDYKISPFTGLMSLIEIYP 357
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 38 FEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSNDE----------------GRK 81
F +IP A+ V +KWI HDWSDE L++L K C E++P N + K
Sbjct: 253 FVSIPKADAVFMKWICHDWSDEHCLKFL-KNCYEALPDNGKVIVAECILPVAPDSSLATK 311
Query: 82 TQLCFDLLM-ATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121
+ D++M A GKE + +++ L AGF +K+ N
Sbjct: 312 GVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCN 352
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 38 FEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESI--------------PSNDEGRKTQ 83
F+ +P + + +KWI HDWSDE L+ L K C ++ PS D T+
Sbjct: 256 FDGVPKGDAIFIKWICHDWSDEHCLKLL-KNCYAALPDHGKVIVAEYILPPSPDPSIATK 314
Query: 84 LCFD---LLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118
+ L++A GKE + +++ L +A+GF +K+
Sbjct: 315 VVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKV 352
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 18/99 (18%)
Query: 38 FEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSN--------------DEGRKTQ 83
F+ +P + +L+KWILHDWSD+ L K C +++P++ + +Q
Sbjct: 254 FKEVPSGDTILMKWILHDWSDQHCATLL-KNCYDALPAHGKVVLVQCILPVNPEANPSSQ 312
Query: 84 LCFD---LLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119
F +++A G+E +++ L AGF+ K T
Sbjct: 313 GVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKST 351
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 41 IPPANVVLLKWILHDWSDEESLRYLKKKCEESIPS--------------NDEGRKTQLCF 86
+P A+V +LK ILH+W DE+S+R L C P+ ND + + F
Sbjct: 245 VPHADVHVLKRILHNWGDEDSVRIL-TNCRRVXPAHGRVLVIDAVVPEGNDAHQSKEXDF 303
Query: 87 DLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132
L A G+E + + + LF AAG ++ + S+ P
Sbjct: 304 XXLAAR--TGQERTAAELEPLFTAAGLRLDRVVGTSSVXSIAVGVP 347
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 38 FEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESI----------------PSNDEGRK 81
F ++P + ++LK + H+WSDE+ + +L C +++ P+ E K
Sbjct: 262 FASVPQGDAMILKAVCHNWSDEKCIEFL-SNCHKALSPNGKVIIVEFILPEEPNTSEESK 320
Query: 82 TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118
D LM + G+E + ++KL +GFS +++
Sbjct: 321 LVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 38 FEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESI----------------PSNDEGRK 81
F ++P + +LK + H+WSDE+ + +L C +++ P+ E K
Sbjct: 262 FASVPQGDAXILKAVCHNWSDEKCIEFL-SNCHKALSPNGKVIIVEFILPEEPNTSEESK 320
Query: 82 TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118
D L + G+E + ++KL +GFS +++
Sbjct: 321 LVSTLDNLXFITVGGRERTEKQYEKLSKLSGFSKFQV 357
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 38 FEAIPP-ANVVLLKWILHDWSDEESLRYLKKKCEESIPS-----------NDEGRKTQLC 85
F+ +P A +L +LHDW D ++ L ++C E+ S DE T +
Sbjct: 229 FDPLPAGAGGYVLSAVLHDWDDLSAVAIL-RRCAEAAGSGGVVLVIEAVAGDEHAGTGM- 286
Query: 86 FDLLMATFLNGKEGSVYDWKKLFLAAGFS 114
DL M T+ GKE S+ + +L AG +
Sbjct: 287 -DLRMLTYFGGKERSLAELGELAAQAGLA 314
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 38 FEAIPP-ANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76
FE IP A+V L+K +LHDW D++ +R L++ P +
Sbjct: 262 FETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDS 301
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 39 EAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSN---------DEGRK----TQLC 85
+ +P A++ +L +LHDW+D + L++ P DE R+ TQL
Sbjct: 240 DPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQL- 298
Query: 86 FDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEA 130
+ L M G+E + + L +AGF ++ ++ I A
Sbjct: 299 YSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILA 343
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 38 FEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIP---------SNDEGRKTQLCF- 86
F+ +P A+VVLL ++L +WSDE++L L+ P ++ EG F
Sbjct: 242 FKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFS 301
Query: 87 ---DLLMATFLNGKEGSVYDWKKLFLAAGFS 114
DL M TF+ G+ + + L +AG +
Sbjct: 302 TLLDLRMLTFMGGRVRTRDEVVDLAGSAGLA 332
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 38 FEAIP-PANVVLLKWILHDWSDEESLRYLK 66
F+ +P A+VVLL ++L +WSDE++L L+
Sbjct: 242 FKPLPVTADVVLLSFVLLNWSDEDALTILR 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,745,199
Number of Sequences: 62578
Number of extensions: 135925
Number of successful extensions: 310
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 284
Number of HSP's gapped (non-prelim): 18
length of query: 132
length of database: 14,973,337
effective HSP length: 88
effective length of query: 44
effective length of database: 9,466,473
effective search space: 416524812
effective search space used: 416524812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 46 (22.3 bits)