Query 043665
Match_columns 132
No_of_seqs 161 out of 1042
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:08:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 5E-34 1.7E-38 221.5 14.8 130 2-132 194-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 9.1E-27 3.1E-31 181.3 15.1 130 2-132 216-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 8.1E-26 2.8E-30 176.1 14.6 130 2-132 218-366 (368)
4 3gwz_A MMCR; methyltransferase 99.9 3.1E-25 1.1E-29 172.6 12.8 130 2-132 217-368 (369)
5 3i53_A O-methyltransferase; CO 99.9 3.8E-25 1.3E-29 169.3 12.9 129 2-132 184-331 (332)
6 3lst_A CALO1 methyltransferase 99.9 2E-24 6.7E-29 166.7 14.2 130 2-132 199-347 (348)
7 1zg3_A Isoflavanone 4'-O-methy 99.9 2.1E-24 7E-29 167.0 12.6 130 2-132 208-358 (358)
8 2ip2_A Probable phenazine-spec 99.9 1.2E-23 3.9E-28 160.9 12.3 130 2-132 182-333 (334)
9 1fp2_A Isoflavone O-methyltran 99.9 1.5E-23 5.2E-28 161.8 13.0 129 2-132 203-352 (352)
10 1fp1_D Isoliquiritigenin 2'-O- 99.9 6.1E-23 2.1E-27 159.6 11.7 130 2-132 224-372 (372)
11 3dp7_A SAM-dependent methyltra 99.9 7.4E-23 2.5E-27 158.9 11.4 130 2-132 194-354 (363)
12 3mcz_A O-methyltransferase; ad 99.9 2.7E-21 9.2E-26 148.7 11.1 128 2-132 194-348 (352)
13 1tw3_A COMT, carminomycin 4-O- 99.8 7.6E-21 2.6E-25 146.6 9.7 130 2-132 198-355 (360)
14 1qzz_A RDMB, aclacinomycin-10- 99.8 2.1E-20 7E-25 144.7 10.1 130 2-132 197-355 (374)
15 2r3s_A Uncharacterized protein 99.8 9.1E-20 3.1E-24 138.9 11.4 129 2-131 180-333 (335)
16 1x19_A CRTF-related protein; m 99.8 3.2E-19 1.1E-23 137.8 13.7 127 2-132 205-358 (359)
17 3dtn_A Putative methyltransfer 99.4 6E-12 2.1E-16 90.9 12.3 129 2-131 59-224 (234)
18 4gek_A TRNA (CMO5U34)-methyltr 99.3 1.6E-11 5.5E-16 91.5 10.2 118 2-120 85-244 (261)
19 2qe6_A Uncharacterized protein 99.2 1.6E-10 5.4E-15 86.5 9.6 112 3-117 96-238 (274)
20 3hnr_A Probable methyltransfer 99.2 4.3E-10 1.5E-14 80.2 11.3 125 3-131 61-210 (220)
21 1ve3_A Hypothetical protein PH 99.1 1.5E-10 5.1E-15 82.8 8.1 127 2-132 53-226 (227)
22 3bxo_A N,N-dimethyltransferase 99.1 3.3E-10 1.1E-14 81.5 8.0 128 2-132 55-238 (239)
23 3ocj_A Putative exported prote 99.1 8.8E-10 3E-14 82.9 9.8 124 7-131 139-302 (305)
24 3dh0_A SAM dependent methyltra 99.1 3.2E-09 1.1E-13 75.6 12.0 123 2-132 52-192 (219)
25 3g2m_A PCZA361.24; SAM-depende 99.0 1.4E-09 4.8E-14 81.5 9.8 128 2-132 97-291 (299)
26 3pfg_A N-methyltransferase; N, 99.0 1E-09 3.5E-14 80.5 8.6 127 3-132 66-248 (263)
27 1kpg_A CFA synthase;, cyclopro 99.0 3.3E-09 1.1E-13 78.7 11.0 118 2-121 79-228 (287)
28 3mgg_A Methyltransferase; NYSG 99.0 1E-09 3.6E-14 80.9 8.3 117 2-121 52-198 (276)
29 3ujc_A Phosphoethanolamine N-m 99.0 3.3E-09 1.1E-13 77.3 9.8 117 2-121 70-206 (266)
30 3dlc_A Putative S-adenosyl-L-m 99.0 5E-10 1.7E-14 79.2 5.2 123 2-128 58-210 (219)
31 3ou2_A SAM-dependent methyltra 99.0 5.9E-09 2E-13 73.8 9.9 117 3-122 62-206 (218)
32 3h2b_A SAM-dependent methyltra 98.9 2.5E-09 8.6E-14 75.4 7.2 120 3-128 57-190 (203)
33 1xtp_A LMAJ004091AAA; SGPP, st 98.9 3.2E-09 1.1E-13 77.1 7.8 114 3-122 109-239 (254)
34 2o57_A Putative sarcosine dime 98.9 1.1E-08 3.7E-13 76.3 10.4 116 2-121 97-234 (297)
35 3bus_A REBM, methyltransferase 98.9 1E-08 3.5E-13 75.3 9.8 116 2-121 76-216 (273)
36 2fk8_A Methoxy mycolic acid sy 98.9 1.2E-08 4E-13 76.9 10.0 118 2-121 105-254 (318)
37 3l8d_A Methyltransferase; stru 98.9 2.1E-08 7E-13 72.3 10.7 114 3-121 69-200 (242)
38 4fsd_A Arsenic methyltransfera 98.9 9.6E-09 3.3E-13 79.9 9.4 116 2-120 98-250 (383)
39 1y8c_A S-adenosylmethionine-de 98.9 1.1E-08 3.8E-13 73.5 9.1 117 2-121 52-225 (246)
40 3dli_A Methyltransferase; PSI- 98.9 2E-08 6.8E-13 72.7 10.4 114 3-122 57-185 (240)
41 3hem_A Cyclopropane-fatty-acyl 98.9 2.3E-08 7.8E-13 74.9 11.0 119 2-122 87-244 (302)
42 2ex4_A Adrenal gland protein A 98.8 5.3E-09 1.8E-13 75.8 6.6 113 4-122 96-226 (241)
43 2p7i_A Hypothetical protein; p 98.8 1.4E-08 4.6E-13 73.0 8.4 114 2-120 57-198 (250)
44 1vl5_A Unknown conserved prote 98.8 1.4E-08 4.9E-13 74.2 8.6 115 2-121 52-190 (260)
45 3g5l_A Putative S-adenosylmeth 98.8 3.6E-09 1.2E-13 77.0 5.1 116 2-121 59-216 (253)
46 3f4k_A Putative methyltransfer 98.8 2.9E-08 9.8E-13 72.2 9.6 114 2-122 61-197 (257)
47 1nkv_A Hypothetical protein YJ 98.8 2.6E-08 8.8E-13 72.4 8.7 115 2-120 51-186 (256)
48 3lcc_A Putative methyl chlorid 98.8 1.2E-08 4E-13 73.7 6.7 105 10-122 87-208 (235)
49 3d2l_A SAM-dependent methyltra 98.8 5.2E-08 1.8E-12 70.1 9.5 108 12-120 55-222 (243)
50 3vc1_A Geranyl diphosphate 2-C 98.8 3.1E-08 1.1E-12 74.7 8.5 114 2-121 132-269 (312)
51 3jwg_A HEN1, methyltransferase 98.8 6.3E-08 2.2E-12 69.0 9.7 116 2-118 44-189 (219)
52 3e23_A Uncharacterized protein 98.7 1.7E-08 5.8E-13 71.6 6.2 110 3-121 59-182 (211)
53 1xxl_A YCGJ protein; structura 98.7 4.8E-08 1.6E-12 70.8 8.6 115 2-121 36-174 (239)
54 3sm3_A SAM-dependent methyltra 98.7 3E-08 1E-12 70.8 7.2 115 3-120 46-206 (235)
55 3kkz_A Uncharacterized protein 98.7 3.7E-08 1.3E-12 72.4 7.6 114 2-122 61-197 (267)
56 3jwh_A HEN1; methyltransferase 98.7 8.8E-08 3E-12 68.2 8.8 116 2-118 44-189 (217)
57 3gu3_A Methyltransferase; alph 98.7 5.1E-08 1.7E-12 72.5 7.8 116 2-120 37-189 (284)
58 3bkw_A MLL3908 protein, S-aden 98.6 1.8E-07 6E-12 67.3 8.9 115 3-121 59-214 (243)
59 3g07_A 7SK snRNA methylphospha 98.6 1.3E-08 4.6E-13 76.3 3.0 119 2-121 61-269 (292)
60 4htf_A S-adenosylmethionine-de 98.6 1.1E-07 3.7E-12 70.5 7.4 115 3-122 84-233 (285)
61 3i9f_A Putative type 11 methyl 98.6 1.6E-07 5.6E-12 64.2 7.4 117 2-131 32-158 (170)
62 3cgg_A SAM-dependent methyltra 98.6 5.1E-07 1.8E-11 62.3 9.4 106 3-121 62-175 (195)
63 3ege_A Putative methyltransfer 98.5 5.1E-07 1.7E-11 66.2 9.6 112 3-121 50-178 (261)
64 2p35_A Trans-aconitate 2-methy 98.5 2.6E-07 8.8E-12 67.1 7.7 112 2-116 48-185 (259)
65 3ccf_A Cyclopropane-fatty-acyl 98.5 1.9E-07 6.7E-12 69.0 7.1 113 3-120 73-209 (279)
66 3ggd_A SAM-dependent methyltra 98.5 3.4E-07 1.1E-11 66.2 7.2 114 2-120 71-218 (245)
67 3e8s_A Putative SAM dependent 98.5 1.6E-07 5.3E-12 66.6 5.4 112 3-120 68-208 (227)
68 2aot_A HMT, histamine N-methyl 98.5 5.5E-07 1.9E-11 67.1 7.7 113 3-118 72-218 (292)
69 1ri5_A MRNA capping enzyme; me 98.4 1.2E-06 4.2E-11 64.6 8.8 117 3-121 80-250 (298)
70 1vlm_A SAM-dependent methyltra 98.4 2E-06 6.8E-11 61.3 8.5 103 15-121 69-188 (219)
71 3cc8_A Putative methyltransfer 98.4 2.8E-06 9.7E-11 60.1 9.2 113 3-121 48-185 (230)
72 3giw_A Protein of unknown func 98.3 1.4E-06 4.7E-11 65.6 7.2 108 7-117 101-243 (277)
73 1pjz_A Thiopurine S-methyltran 98.3 1.5E-06 5.2E-11 61.7 6.8 114 3-121 38-176 (203)
74 3bkx_A SAM-dependent methyltra 98.3 3E-06 1E-10 62.0 8.4 117 2-121 58-219 (275)
75 2xvm_A Tellurite resistance pr 98.3 4.1E-06 1.4E-10 58.2 8.4 108 3-120 48-172 (199)
76 2i62_A Nicotinamide N-methyltr 98.2 3E-06 1E-10 61.5 7.3 113 5-121 74-239 (265)
77 4e2x_A TCAB9; kijanose, tetron 98.2 5.5E-06 1.9E-10 64.6 9.1 113 2-122 122-254 (416)
78 2yqz_A Hypothetical protein TT 98.2 4.9E-06 1.7E-10 60.3 8.2 112 2-118 54-193 (263)
79 1af7_A Chemotaxis receptor met 98.2 1.9E-06 6.4E-11 64.6 5.7 74 3-77 125-246 (274)
80 2b3t_A Protein methyltransfera 98.2 2E-05 6.9E-10 58.2 10.6 116 2-131 124-274 (276)
81 3grz_A L11 mtase, ribosomal pr 98.2 6.8E-06 2.3E-10 57.8 7.5 109 6-132 78-196 (205)
82 3thr_A Glycine N-methyltransfe 98.2 4.7E-06 1.6E-10 61.6 7.0 73 2-77 72-169 (293)
83 2p8j_A S-adenosylmethionine-de 98.1 1.9E-06 6.7E-11 60.4 4.4 108 9-117 44-179 (209)
84 1wzn_A SAM-dependent methyltra 98.1 2.6E-05 8.9E-10 56.3 10.3 72 3-77 57-139 (252)
85 2zfu_A Nucleomethylin, cerebra 98.1 3.8E-06 1.3E-10 59.4 5.6 88 31-132 98-190 (215)
86 2kw5_A SLR1183 protein; struct 98.1 2.2E-05 7.4E-10 54.9 8.9 108 4-120 46-170 (202)
87 2ld4_A Anamorsin; methyltransf 98.0 1.4E-05 4.8E-10 54.9 6.3 86 20-116 30-130 (176)
88 3g5t_A Trans-aconitate 3-methy 98.0 1.5E-05 5.3E-10 59.3 6.7 109 2-114 51-197 (299)
89 3e05_A Precorrin-6Y C5,15-meth 98.0 7.3E-05 2.5E-09 52.4 9.9 95 2-114 55-161 (204)
90 1fbn_A MJ fibrillarin homologu 97.9 0.0001 3.4E-09 52.9 9.7 119 2-131 89-226 (230)
91 2gb4_A Thiopurine S-methyltran 97.9 6.6E-05 2.3E-09 55.2 8.2 111 3-120 84-226 (252)
92 2h00_A Methyltransferase 10 do 97.9 8.8E-06 3E-10 59.2 3.4 119 2-121 80-238 (254)
93 3bwc_A Spermidine synthase; SA 97.8 6.2E-05 2.1E-09 56.7 7.9 108 2-120 110-239 (304)
94 2g72_A Phenylethanolamine N-me 97.8 3.8E-05 1.3E-09 56.9 5.6 75 44-120 175-255 (289)
95 2qm3_A Predicted methyltransfe 97.7 0.0002 6.7E-09 55.4 9.3 105 2-120 186-308 (373)
96 3htx_A HEN1; HEN1, small RNA m 97.6 0.00044 1.5E-08 59.2 10.4 114 2-116 736-893 (950)
97 3p2e_A 16S rRNA methylase; met 97.6 7.5E-05 2.6E-09 53.9 5.0 120 2-122 39-186 (225)
98 3ofk_A Nodulation protein S; N 97.6 6.8E-05 2.3E-09 52.8 4.7 72 3-77 67-148 (216)
99 3m70_A Tellurite resistance pr 97.6 0.0001 3.5E-09 54.3 5.5 107 3-119 136-258 (286)
100 4hg2_A Methyltransferase type 97.6 0.00015 5.2E-09 53.5 6.4 70 2-77 54-129 (257)
101 4dzr_A Protein-(glutamine-N5) 97.5 8.4E-05 2.9E-09 51.8 4.2 116 2-130 45-202 (215)
102 2vdw_A Vaccinia virus capping 97.5 0.00041 1.4E-08 52.3 8.2 67 10-77 70-163 (302)
103 1dus_A MJ0882; hypothetical pr 97.5 0.0005 1.7E-08 46.9 8.0 113 3-132 68-193 (194)
104 3mq2_A 16S rRNA methyltransfer 97.5 0.0004 1.4E-08 49.0 7.7 115 2-121 42-184 (218)
105 2a14_A Indolethylamine N-methy 97.5 0.00013 4.5E-09 53.4 5.1 75 43-121 156-238 (263)
106 3orh_A Guanidinoacetate N-meth 97.5 5.5E-05 1.9E-09 54.8 2.8 112 3-118 76-207 (236)
107 2pjd_A Ribosomal RNA small sub 97.5 0.0001 3.6E-09 56.2 4.4 75 2-77 211-297 (343)
108 2gs9_A Hypothetical protein TT 97.4 0.00037 1.3E-08 48.8 6.6 95 13-112 58-171 (211)
109 3bgv_A MRNA CAP guanine-N7 met 97.4 0.00036 1.2E-08 52.2 6.9 117 3-121 50-232 (313)
110 3b3j_A Histone-arginine methyl 97.4 0.00014 4.6E-09 58.4 4.6 73 3-77 174-257 (480)
111 3q87_B N6 adenine specific DNA 97.4 0.00083 2.8E-08 46.0 8.0 100 2-121 38-149 (170)
112 1zx0_A Guanidinoacetate N-meth 97.4 0.00011 3.7E-09 52.8 3.5 105 9-115 81-204 (236)
113 3evz_A Methyltransferase; NYSG 97.4 0.00073 2.5E-08 47.9 7.8 108 3-123 72-208 (230)
114 3kr9_A SAM-dependent methyltra 97.4 0.0018 6.2E-08 47.1 10.0 111 2-131 30-156 (225)
115 2ipx_A RRNA 2'-O-methyltransfe 97.4 0.00081 2.8E-08 48.0 8.0 120 2-131 92-230 (233)
116 1yzh_A TRNA (guanine-N(7)-)-me 97.4 0.0016 5.5E-08 45.9 9.3 74 2-77 56-150 (214)
117 3hm2_A Precorrin-6Y C5,15-meth 97.3 0.0003 1E-08 47.7 4.8 97 2-118 40-150 (178)
118 3gjy_A Spermidine synthase; AP 97.3 0.00023 7.9E-09 54.4 4.4 75 2-77 104-194 (317)
119 3mb5_A SAM-dependent methyltra 97.3 0.00065 2.2E-08 49.0 6.5 99 2-120 108-221 (255)
120 2nxc_A L11 mtase, ribosomal pr 97.2 0.00038 1.3E-08 50.9 5.1 109 2-131 135-253 (254)
121 2pxx_A Uncharacterized protein 97.2 0.00036 1.2E-08 48.6 4.5 74 2-77 57-153 (215)
122 3lec_A NADB-rossmann superfami 97.1 0.0046 1.6E-07 45.1 9.9 111 2-131 36-162 (230)
123 3fzg_A 16S rRNA methylase; met 97.1 6.6E-05 2.2E-09 53.8 -0.1 73 2-77 64-146 (200)
124 3lpm_A Putative methyltransfer 97.1 0.0041 1.4E-07 45.2 9.6 115 2-131 64-217 (259)
125 1yb2_A Hypothetical protein TA 97.1 0.00074 2.5E-08 49.7 5.2 99 2-120 125-236 (275)
126 3m33_A Uncharacterized protein 97.1 0.00018 6.3E-09 51.3 1.7 94 3-120 64-166 (226)
127 1xdz_A Methyltransferase GIDB; 97.1 0.0036 1.2E-07 44.9 8.6 101 2-120 85-201 (240)
128 4dcm_A Ribosomal RNA large sub 97.0 0.00059 2E-08 53.0 4.5 75 2-77 237-328 (375)
129 1g8a_A Fibrillarin-like PRE-rR 97.0 0.0067 2.3E-07 42.9 9.8 120 2-132 88-226 (227)
130 3tfw_A Putative O-methyltransf 96.9 0.0015 5.2E-08 47.4 5.8 70 2-77 78-164 (248)
131 2y1w_A Histone-arginine methyl 96.9 0.0014 4.7E-08 50.1 5.3 69 8-77 70-149 (348)
132 3duw_A OMT, O-methyltransferas 96.9 0.0066 2.3E-07 42.7 8.5 70 2-77 73-161 (223)
133 3iv6_A Putative Zn-dependent a 96.9 0.0023 7.9E-08 47.4 6.3 71 3-77 61-142 (261)
134 3njr_A Precorrin-6Y methylase; 96.8 0.0048 1.6E-07 43.4 7.4 95 3-119 71-178 (204)
135 3fpf_A Mtnas, putative unchara 96.8 0.0037 1.3E-07 47.3 6.8 67 4-77 139-216 (298)
136 1l3i_A Precorrin-6Y methyltran 96.7 0.0034 1.2E-07 42.6 5.9 94 3-116 49-155 (192)
137 1o54_A SAM-dependent O-methylt 96.7 0.0014 4.8E-08 48.1 3.8 99 2-120 127-238 (277)
138 2pwy_A TRNA (adenine-N(1)-)-me 96.7 0.0029 9.9E-08 45.4 5.4 99 2-120 111-223 (258)
139 3uwp_A Histone-lysine N-methyl 96.7 0.0043 1.5E-07 49.2 6.7 72 2-77 188-282 (438)
140 3g89_A Ribosomal RNA small sub 96.6 0.0075 2.6E-07 43.9 7.4 112 2-131 95-227 (249)
141 3lcv_B Sisomicin-gentamicin re 96.6 0.0034 1.2E-07 47.0 5.5 120 3-128 148-279 (281)
142 3ntv_A MW1564 protein; rossman 96.5 0.002 6.7E-08 46.2 3.5 70 2-77 86-170 (232)
143 1jsx_A Glucose-inhibited divis 96.5 0.0043 1.5E-07 43.1 5.2 108 2-131 80-203 (207)
144 3gnl_A Uncharacterized protein 96.5 0.032 1.1E-06 40.9 10.0 111 2-131 36-162 (244)
145 1p91_A Ribosomal RNA large sub 96.4 0.0021 7.3E-08 46.6 3.5 66 2-77 100-172 (269)
146 3u81_A Catechol O-methyltransf 96.4 0.0056 1.9E-07 43.3 5.6 72 2-77 73-164 (221)
147 1nt2_A Fibrillarin-like PRE-rR 96.4 0.038 1.3E-06 39.0 10.0 116 2-132 72-209 (210)
148 1o9g_A RRNA methyltransferase; 96.3 0.0045 1.5E-07 44.6 4.8 75 2-77 66-208 (250)
149 1nv8_A HEMK protein; class I a 96.3 0.015 5E-07 43.2 7.7 73 2-77 138-243 (284)
150 2yxd_A Probable cobalt-precorr 96.3 0.019 6.3E-07 38.6 7.2 93 3-118 51-154 (183)
151 3q7e_A Protein arginine N-meth 96.3 0.0035 1.2E-07 47.9 3.9 73 3-77 82-167 (349)
152 2gpy_A O-methyltransferase; st 96.2 0.0056 1.9E-07 43.5 4.4 70 2-77 69-154 (233)
153 3hp7_A Hemolysin, putative; st 96.1 0.017 5.9E-07 43.4 7.0 104 8-120 105-231 (291)
154 4df3_A Fibrillarin-like rRNA/T 96.1 0.051 1.7E-06 39.5 9.3 118 4-131 94-230 (233)
155 3eey_A Putative rRNA methylase 96.1 0.0068 2.3E-07 41.8 4.4 75 2-77 37-133 (197)
156 3adn_A Spermidine synthase; am 96.0 0.0044 1.5E-07 46.5 3.3 75 2-77 98-192 (294)
157 3dr5_A Putative O-methyltransf 96.0 0.0093 3.2E-07 42.6 4.9 70 2-77 71-157 (221)
158 2i7c_A Spermidine synthase; tr 96.0 0.0039 1.3E-07 46.3 2.8 75 2-77 93-186 (283)
159 2ozv_A Hypothetical protein AT 95.9 0.0079 2.7E-07 43.9 4.3 104 2-120 51-193 (260)
160 2hnk_A SAM-dependent O-methylt 95.9 0.027 9.2E-07 40.2 7.1 70 2-77 75-175 (239)
161 3bzb_A Uncharacterized protein 95.8 0.067 2.3E-06 39.3 9.2 107 3-120 95-236 (281)
162 2fca_A TRNA (guanine-N(7)-)-me 95.8 0.025 8.4E-07 39.9 6.5 74 2-77 53-147 (213)
163 2frn_A Hypothetical protein PH 95.8 0.057 1.9E-06 39.7 8.7 100 2-117 140-253 (278)
164 3mti_A RRNA methylase; SAM-dep 95.8 0.017 5.7E-07 39.3 5.4 111 3-122 38-170 (185)
165 3c3p_A Methyltransferase; NP_9 95.8 0.0081 2.8E-07 42.0 3.8 70 2-77 71-154 (210)
166 2yxe_A Protein-L-isoaspartate 95.8 0.011 3.8E-07 41.2 4.4 67 2-77 92-171 (215)
167 1g6q_1 HnRNP arginine N-methyl 95.7 0.0094 3.2E-07 45.1 4.1 72 4-77 55-139 (328)
168 3tr6_A O-methyltransferase; ce 95.7 0.0075 2.6E-07 42.4 3.3 70 2-77 79-168 (225)
169 2avn_A Ubiquinone/menaquinone 95.6 0.0048 1.6E-07 44.7 2.0 112 4-123 71-215 (260)
170 1iy9_A Spermidine synthase; ro 95.6 0.0043 1.5E-07 46.0 1.8 75 2-77 90-183 (275)
171 1sui_A Caffeoyl-COA O-methyltr 95.6 0.02 6.7E-07 41.6 5.2 70 2-77 94-184 (247)
172 3r0q_C Probable protein argini 95.6 0.011 3.6E-07 45.7 4.0 73 3-77 79-163 (376)
173 3opn_A Putative hemolysin; str 95.6 0.015 5.2E-07 41.9 4.6 107 4-120 54-183 (232)
174 2fyt_A Protein arginine N-meth 95.5 0.017 5.7E-07 44.0 4.8 73 3-77 80-165 (340)
175 3c3y_A Pfomt, O-methyltransfer 95.5 0.012 4.2E-07 42.2 3.8 70 2-77 85-175 (237)
176 1mjf_A Spermidine synthase; sp 95.4 0.01 3.5E-07 43.9 3.3 74 2-77 90-187 (281)
177 3dxy_A TRNA (guanine-N(7)-)-me 95.4 0.012 4E-07 42.0 3.4 74 2-77 49-144 (218)
178 2b2c_A Spermidine synthase; be 95.4 0.0073 2.5E-07 45.7 2.5 75 2-77 123-216 (314)
179 3r3h_A O-methyltransferase, SA 95.4 0.026 8.7E-07 40.8 5.2 70 2-77 75-164 (242)
180 2pt6_A Spermidine synthase; tr 95.3 0.0098 3.4E-07 45.1 2.9 74 2-77 131-224 (321)
181 1rjd_A PPM1P, carboxy methyl t 95.3 0.077 2.6E-06 40.5 7.9 111 3-114 113-281 (334)
182 2uyo_A Hypothetical protein ML 95.3 0.07 2.4E-06 40.3 7.5 105 11-116 125-274 (310)
183 1inl_A Spermidine synthase; be 95.2 0.012 4E-07 44.0 3.1 75 2-77 105-199 (296)
184 3o4f_A Spermidine synthase; am 95.2 0.011 3.9E-07 44.5 3.1 74 2-77 98-192 (294)
185 1u2z_A Histone-lysine N-methyl 95.2 0.05 1.7E-06 43.1 6.7 72 2-77 257-353 (433)
186 2o07_A Spermidine synthase; st 95.1 0.011 3.8E-07 44.4 2.7 75 2-77 110-203 (304)
187 2avd_A Catechol-O-methyltransf 95.1 0.011 3.9E-07 41.6 2.6 70 2-77 84-173 (229)
188 3p9n_A Possible methyltransfer 95.1 0.097 3.3E-06 35.7 7.3 68 8-77 64-147 (189)
189 1xj5_A Spermidine synthase 1; 95.0 0.014 4.6E-07 44.6 3.0 74 2-77 135-229 (334)
190 1uir_A Polyamine aminopropyltr 95.0 0.014 4.7E-07 44.0 3.0 75 2-77 92-189 (314)
191 3dmg_A Probable ribosomal RNA 94.9 0.051 1.7E-06 42.1 6.0 73 2-77 248-334 (381)
192 2bm8_A Cephalosporin hydroxyla 94.9 0.073 2.5E-06 38.2 6.5 99 3-117 97-215 (236)
193 1ej0_A FTSJ; methyltransferase 94.7 0.02 6.8E-07 37.9 2.8 100 2-119 37-159 (180)
194 1jg1_A PIMT;, protein-L-isoasp 94.7 0.03 1E-06 39.8 3.8 66 2-77 106-183 (235)
195 3id6_C Fibrillarin-like rRNA/T 94.6 0.32 1.1E-05 35.2 9.2 118 4-131 93-229 (232)
196 2vdv_E TRNA (guanine-N(7)-)-me 94.4 0.016 5.4E-07 41.7 1.8 70 2-77 64-167 (246)
197 3lbf_A Protein-L-isoaspartate 94.3 0.052 1.8E-06 37.6 4.3 64 3-77 93-168 (210)
198 3gdh_A Trimethylguanosine synt 94.2 0.0087 3E-07 42.6 0.1 111 3-123 94-221 (241)
199 1dl5_A Protein-L-isoaspartate 94.0 0.051 1.7E-06 40.7 4.0 67 2-77 90-169 (317)
200 3ckk_A TRNA (guanine-N(7)-)-me 94.0 0.062 2.1E-06 38.6 4.3 74 2-77 61-162 (235)
201 2fhp_A Methylase, putative; al 94.0 0.049 1.7E-06 36.7 3.6 71 4-77 61-148 (187)
202 2cmg_A Spermidine synthase; tr 94.0 0.062 2.1E-06 39.5 4.3 66 2-77 87-165 (262)
203 1wy7_A Hypothetical protein PH 93.9 0.21 7.2E-06 34.3 6.8 101 3-120 65-174 (207)
204 3cbg_A O-methyltransferase; cy 93.8 0.029 9.9E-07 40.0 2.3 70 2-77 87-176 (232)
205 2esr_A Methyltransferase; stru 93.8 0.019 6.3E-07 38.8 1.2 70 3-77 47-132 (177)
206 1ws6_A Methyltransferase; stru 93.8 0.022 7.4E-07 37.9 1.5 71 2-77 56-141 (171)
207 1ne2_A Hypothetical protein TA 93.7 0.12 4.1E-06 35.5 5.3 96 3-118 67-167 (200)
208 1ixk_A Methyltransferase; open 93.6 0.17 5.8E-06 37.9 6.2 75 2-77 133-240 (315)
209 3sso_A Methyltransferase; macr 93.6 0.046 1.6E-06 43.1 3.2 68 4-77 239-318 (419)
210 1zq9_A Probable dimethyladenos 93.5 0.19 6.6E-06 37.1 6.3 72 2-77 43-141 (285)
211 1vbf_A 231AA long hypothetical 93.3 0.1 3.5E-06 36.6 4.5 64 3-77 86-159 (231)
212 2yvl_A TRMI protein, hypotheti 93.0 0.13 4.5E-06 36.3 4.7 66 2-77 106-184 (248)
213 2plw_A Ribosomal RNA methyltra 93.0 0.1 3.6E-06 35.7 4.0 100 2-119 37-177 (201)
214 1i9g_A Hypothetical protein RV 92.5 0.088 3E-06 38.1 3.1 68 2-77 114-197 (280)
215 2pbf_A Protein-L-isoaspartate 91.9 0.3 1E-05 34.0 5.3 66 3-77 96-187 (227)
216 3tma_A Methyltransferase; thum 91.8 0.42 1.4E-05 36.1 6.4 103 2-121 218-339 (354)
217 3ajd_A Putative methyltransfer 91.6 0.25 8.7E-06 36.0 4.8 75 2-77 98-205 (274)
218 3a27_A TYW2, uncharacterized p 91.6 0.18 6.2E-06 36.9 4.0 69 2-77 134-213 (272)
219 2b25_A Hypothetical protein; s 91.6 0.19 6.4E-06 37.7 4.1 68 2-77 120-213 (336)
220 3frh_A 16S rRNA methylase; met 91.5 0.13 4.5E-06 37.9 3.1 66 10-77 125-200 (253)
221 2ift_A Putative methylase HI07 91.5 0.13 4.6E-06 35.7 3.1 69 4-77 70-157 (201)
222 3b5i_A S-adenosyl-L-methionine 91.3 0.57 2E-05 36.3 6.7 109 10-119 90-296 (374)
223 3iei_A Leucine carboxyl methyl 91.0 3.1 0.0001 31.6 10.4 111 10-121 114-281 (334)
224 4hc4_A Protein arginine N-meth 90.8 0.26 8.8E-06 38.2 4.3 72 5-77 100-183 (376)
225 3tm4_A TRNA (guanine N2-)-meth 90.5 0.76 2.6E-05 35.1 6.7 102 2-121 232-352 (373)
226 1r18_A Protein-L-isoaspartate( 90.4 0.11 3.9E-06 36.5 1.9 58 11-77 114-188 (227)
227 2yxl_A PH0851 protein, 450AA l 89.9 0.92 3.2E-05 35.6 6.9 75 2-77 274-383 (450)
228 1i1n_A Protein-L-isoaspartate 89.2 0.51 1.7E-05 32.8 4.5 66 3-77 93-176 (226)
229 2fpo_A Methylase YHHF; structu 88.7 0.71 2.4E-05 31.9 4.9 69 4-77 71-154 (202)
230 3m6w_A RRNA methylase; rRNA me 88.7 0.42 1.4E-05 38.1 4.1 74 2-77 116-223 (464)
231 3c6k_A Spermine synthase; sper 88.7 0.43 1.5E-05 37.2 4.1 74 2-77 220-325 (381)
232 2f8l_A Hypothetical protein LM 88.3 0.36 1.2E-05 36.4 3.3 102 3-115 146-280 (344)
233 1sqg_A SUN protein, FMU protei 87.6 0.81 2.8E-05 35.6 5.1 75 2-77 261-368 (429)
234 2frx_A Hypothetical protein YE 87.1 1.2 4.2E-05 35.4 5.9 74 3-77 133-240 (479)
235 4azs_A Methyltransferase WBDD; 86.9 0.18 6.3E-06 40.8 1.0 73 2-77 81-167 (569)
236 2ih2_A Modification methylase 86.3 0.97 3.3E-05 34.5 4.8 46 2-50 54-105 (421)
237 2igt_A SAM dependent methyltra 86.0 0.92 3.2E-05 34.2 4.5 100 3-116 169-299 (332)
238 2h1r_A Dimethyladenosine trans 85.7 2 6.7E-05 31.8 6.1 61 3-66 58-128 (299)
239 2efj_A 3,7-dimethylxanthine me 84.7 2.4 8.3E-05 32.9 6.4 22 98-119 268-290 (384)
240 2nyu_A Putative ribosomal RNA 82.6 0.73 2.5E-05 31.1 2.4 71 2-77 37-139 (196)
241 3k6r_A Putative transferase PH 82.0 0.93 3.2E-05 33.6 2.9 98 4-116 142-252 (278)
242 3m4x_A NOL1/NOP2/SUN family pr 81.8 0.99 3.4E-05 35.8 3.2 74 3-77 121-228 (456)
243 2zwa_A Leucine carboxyl methyl 80.2 18 0.00061 29.8 10.3 107 11-120 139-308 (695)
244 2xyq_A Putative 2'-O-methyl tr 79.9 1.6 5.4E-05 32.5 3.6 95 5-119 85-195 (290)
245 2as0_A Hypothetical protein PH 78.5 1.6 5.4E-05 33.5 3.3 72 4-77 234-329 (396)
246 1m6e_X S-adenosyl-L-methionnin 77.1 18 0.00061 27.7 8.8 109 9-118 89-277 (359)
247 1m6y_A S-adenosyl-methyltransf 75.5 4.7 0.00016 30.0 5.1 48 2-49 41-104 (301)
248 2p41_A Type II methyltransfera 74.8 3.9 0.00013 30.4 4.5 64 13-77 105-185 (305)
249 2vz8_A Fatty acid synthase; tr 74.2 0.77 2.6E-05 43.6 0.5 72 44-119 1312-1393(2512)
250 2wa2_A Non-structural protein 72.6 2.6 8.8E-05 30.9 3.0 63 12-77 104-185 (276)
251 2qfm_A Spermine synthase; sper 72.5 3.7 0.00013 31.7 3.9 74 2-77 203-308 (364)
252 2b78_A Hypothetical protein SM 72.4 4.5 0.00016 30.9 4.4 65 12-77 236-325 (385)
253 4gqb_A Protein arginine N-meth 72.2 2.8 9.7E-05 34.7 3.4 66 11-77 385-461 (637)
254 1wxx_A TT1595, hypothetical pr 72.1 2.8 9.6E-05 32.0 3.2 72 3-77 225-319 (382)
255 2oxt_A Nucleoside-2'-O-methylt 72.0 2.7 9.3E-05 30.6 3.0 64 12-77 96-177 (265)
256 1qam_A ERMC' methyltransferase 70.4 13 0.00046 26.2 6.4 62 2-65 45-115 (244)
257 2yx1_A Hypothetical protein MJ 70.1 5.9 0.0002 29.6 4.6 61 10-77 215-285 (336)
258 3dou_A Ribosomal RNA large sub 69.3 3.8 0.00013 28.0 3.1 91 11-119 47-162 (191)
259 3ldg_A Putative uncharacterize 64.5 29 0.00098 26.6 7.5 65 10-75 255-333 (384)
260 1uwv_A 23S rRNA (uracil-5-)-me 64.4 40 0.0014 26.0 8.4 98 3-122 302-415 (433)
261 3k0b_A Predicted N6-adenine-sp 61.3 10 0.00035 29.2 4.4 65 10-75 262-340 (393)
262 1yub_A Ermam, rRNA methyltrans 59.7 9.3 0.00032 26.9 3.7 72 3-77 45-139 (245)
263 3c0k_A UPF0064 protein YCCW; P 58.9 7.1 0.00024 29.8 3.2 72 3-77 236-333 (396)
264 1whz_A Hypothetical protein; a 56.3 14 0.00049 21.0 3.5 20 99-118 5-24 (70)
265 3gru_A Dimethyladenosine trans 51.0 26 0.0009 25.8 5.0 62 2-66 65-136 (295)
266 4dmg_A Putative uncharacterize 50.0 13 0.00046 28.5 3.4 71 3-77 230-320 (393)
267 3tka_A Ribosomal RNA small sub 49.2 42 0.0014 25.7 5.9 35 2-36 72-110 (347)
268 2lmc_A Bacterial RNA polymeras 48.6 24 0.00082 21.1 3.5 24 99-122 54-81 (84)
269 3v97_A Ribosomal RNA large sub 47.5 29 0.001 28.8 5.3 65 12-77 563-651 (703)
270 3a1y_A 50S ribosomal protein P 47.5 12 0.00042 20.9 2.1 25 93-117 11-35 (58)
271 2hiy_A Hypothetical protein; C 45.8 20 0.00068 24.7 3.4 30 94-123 16-46 (183)
272 3fpn_B Geobacillus stearotherm 40.9 16 0.00054 22.8 2.1 31 93-123 17-47 (106)
273 3ldu_A Putative methylase; str 37.7 37 0.0013 25.8 4.2 65 10-75 256-334 (385)
274 3ggo_A Prephenate dehydrogenas 36.3 1.1E+02 0.0038 22.3 6.5 70 2-77 49-122 (314)
275 3axs_A Probable N(2),N(2)-dime 36.0 42 0.0014 25.9 4.2 68 3-77 68-152 (392)
276 3i31_A Heat resistant RNA depe 35.4 75 0.0026 19.3 4.4 30 94-123 18-47 (88)
277 1cee_B Wiskott-aldrich syndrom 35.0 17 0.00057 20.4 1.4 21 99-119 33-53 (59)
278 2lbf_B 60S acidic ribosomal pr 34.5 16 0.00054 21.3 1.2 27 91-117 10-37 (70)
279 1wg8_A Predicted S-adenosylmet 34.3 79 0.0027 23.4 5.3 46 2-49 37-95 (285)
280 3lap_A Arginine repressor; arg 33.6 18 0.00063 24.7 1.6 24 94-117 30-53 (170)
281 3aaf_A Werner syndrome ATP-dep 32.4 1E+02 0.0034 19.8 5.9 27 92-118 57-87 (134)
282 3fut_A Dimethyladenosine trans 32.1 1.2E+02 0.004 21.9 5.9 62 2-66 61-132 (271)
283 2jjq_A Uncharacterized RNA met 31.7 74 0.0025 24.6 5.0 66 3-77 306-381 (425)
284 3ouv_A Serine/threonine protei 31.3 71 0.0024 17.7 4.8 20 99-118 16-35 (71)
285 4go6_A HCF N-terminal chain 1; 30.9 37 0.0013 18.0 2.2 22 29-50 10-39 (45)
286 2lnh_A N-WAsp, neural wiskott- 30.1 14 0.00046 21.3 0.4 18 100-117 23-40 (65)
287 3ua3_A Protein arginine N-meth 30.0 59 0.002 27.5 4.3 66 11-77 446-528 (745)
288 2wk1_A NOVP; transferase, O-me 29.6 63 0.0022 23.7 4.1 43 30-77 189-238 (282)
289 3vyw_A MNMC2; tRNA wobble urid 27.9 86 0.0029 23.4 4.6 29 102-130 229-257 (308)
290 3ftd_A Dimethyladenosine trans 26.6 1.2E+02 0.004 21.4 5.1 63 3-66 47-117 (249)
291 2z30_B TK-subtilisin; thermoco 26.5 64 0.0022 17.9 3.0 31 6-36 26-57 (65)
292 3izc_v 60S acidic ribosomal pr 25.8 11 0.00036 23.9 -0.6 29 90-118 8-36 (106)
293 2o3j_A UDP-glucose 6-dehydroge 25.7 99 0.0034 24.2 4.9 75 2-77 25-129 (481)
294 2okc_A Type I restriction enzy 25.4 18 0.0006 28.1 0.4 67 10-77 207-301 (445)
295 3b1f_A Putative prephenate deh 24.7 1.8E+02 0.0063 20.4 7.1 70 2-77 22-95 (290)
296 3v4g_A Arginine repressor; vib 24.6 28 0.00096 24.1 1.3 21 95-115 44-64 (180)
297 2fi0_A Conserved domain protei 24.4 61 0.0021 18.9 2.7 18 99-116 61-78 (81)
298 1x8d_A Hypothetical protein YI 24.3 1.1E+02 0.0037 18.9 3.9 29 102-130 27-58 (104)
299 2lbf_A 60S acidic ribosomal pr 24.1 27 0.00091 20.2 0.9 24 95-118 19-42 (69)
300 1f3m_A Serine/threonine-protei 24.0 41 0.0014 20.0 1.8 21 98-118 28-48 (80)
301 1b4a_A Arginine repressor; hel 23.2 38 0.0013 22.5 1.7 23 95-117 16-38 (149)
302 1ej5_A WAsp, wiskott-aldrich s 22.7 45 0.0015 21.0 1.9 19 99-117 21-39 (107)
303 2xc7_A Phosphorylated adapter 21.5 16 0.00053 23.1 -0.5 65 45-110 23-91 (104)
304 3iwl_A Copper transport protei 21.4 96 0.0033 16.5 3.0 22 98-119 45-66 (68)
305 2km1_A Protein DRE2; yeast, an 21.3 50 0.0017 21.7 2.0 16 62-78 78-93 (136)
306 3uzu_A Ribosomal RNA small sub 21.2 52 0.0018 23.9 2.3 38 2-39 57-101 (279)
307 1cc8_A Protein (metallochapero 21.1 1.1E+02 0.0037 16.4 3.3 21 99-119 51-71 (73)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=5e-34 Score=221.50 Aligned_cols=130 Identities=21% Similarity=0.324 Sum_probs=119.2
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC------CCCeEEEe--ccc-cCCCceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG------TNNLEFFL--EFE-AIPPANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~------~~ri~~~~--~~~-~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
+.+++++||+++++++|+|++++.+++ .+||++++ ||+ +.|++|+|++++|||||+|++|++||+ +++++
T Consensus 194 ~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~-~~~~a 272 (353)
T 4a6d_A 194 AKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLE-RIYHT 272 (353)
T ss_dssp HHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHH-HHHHH
T ss_pred HHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeecccCCHHHHHHHHH-HHHhh
Confidence 678999999999999999999998875 58999999 887 566799999999999999999999999 99999
Q ss_pred CCCCC-----C--------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 73 IPSND-----E--------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 73 l~~~g-----~--------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
|+||| + .+.....+|++||+.+||++||.+||++||++|||+.++++++++..++|+++|
T Consensus 273 l~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 273 CKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred CCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 99999 1 123457899999999999999999999999999999999999999999999987
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.95 E-value=9.1e-27 Score=181.28 Aligned_cols=130 Identities=26% Similarity=0.359 Sum_probs=117.6
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcCCCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC--
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWGTNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSND-- 77 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g-- 77 (132)
+..++++||+++++++|+|.+++.+++.+||+++. +++++|.+|+|+++++||+|+|+++.++|+ +++++|+|||
T Consensus 216 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~-~~~~~L~pgG~l 294 (364)
T 3p9c_A 216 VAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLK-NCYDALPAHGKV 294 (364)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHH-HHHHHSCTTCEE
T ss_pred HHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCCCCCCCCEEEehHHhccCCHHHHHHHHH-HHHHHcCCCCEE
Confidence 57899999999999999999999999889999999 888888789999999999999999999999 9999999999
Q ss_pred -------CC-Cc------chhhhhhhhhh-cCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 78 -------EG-RK------TQLCFDLLMAT-FLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 78 -------~~-~~------~~~~~dl~m~~-~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+. +. ....+|+.|++ ..+|++||.+||+++|++|||+.+++.+..+..++||++|
T Consensus 295 ~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 295 VLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp EEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred EEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 11 11 12468999985 4799999999999999999999999999999999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.94 E-value=8.1e-26 Score=176.07 Aligned_cols=130 Identities=26% Similarity=0.442 Sum_probs=117.4
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcCCCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC--
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWGTNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSND-- 77 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g-- 77 (132)
+..+++++|+++++++|+|.+++.+++.+||+++. +++++|.+|+|+++++||+|+|+++.++|+ +++++|+|||
T Consensus 218 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~-~~~~~L~pgG~l 296 (368)
T 3reo_A 218 ASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLK-NCYAALPDHGKV 296 (368)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHH-HHHHHSCTTCEE
T ss_pred HHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCCCCCCCCEEEEechhhcCCHHHHHHHHH-HHHHHcCCCCEE
Confidence 57899999999999999999999999888999998 888888789999999999999999999999 9999999999
Q ss_pred -------CC-Cc------chhhhhhhhhhc-CCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 78 -------EG-RK------TQLCFDLLMATF-LNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 78 -------~~-~~------~~~~~dl~m~~~-~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+. +. ....+|+.|+.. .+|++||.+||+++|++|||+.+++.+..+..++||++|
T Consensus 297 ~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 297 IVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp EEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred EEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 11 11 224689888875 599999999999999999999999999999999999987
No 4
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.93 E-value=3.1e-25 Score=172.61 Aligned_cols=130 Identities=25% Similarity=0.414 Sum_probs=116.6
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++|+++++++|+|.+++.+++ .+||+++. +++++| ++|+|+++++||+|+|+++.++|+ ++++
T Consensus 217 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~-~~~~ 295 (369)
T 3gwz_A 217 MAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILR-RIAT 295 (369)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHH-HHHT
T ss_pred HHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccCCHHHHHHHHH-HHHH
Confidence 568899999999999999999998875 57999999 778888 599999999999999999999999 9999
Q ss_pred hCCCCC-----C----C--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe-cCCcceEEEEEC
Q 043665 72 SIPSND-----E----G--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP-NLGLWSLIEAYP 132 (132)
Q Consensus 72 al~~~g-----~----~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~~ie~~p 132 (132)
+|+||| + . ......+|+.|+...+|++||.+||+++|++|||+++++.+ ..+..++||++|
T Consensus 296 ~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 296 AMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp TCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 999999 1 1 11145789999888899999999999999999999999999 678899999987
No 5
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.93 E-value=3.8e-25 Score=169.35 Aligned_cols=129 Identities=26% Similarity=0.324 Sum_probs=115.5
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++|+++++++|+|.+++.+++ .+||+++. +++++| ++|+|+++++||+|+|+++.++|+ ++++
T Consensus 184 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~-~~~~ 262 (332)
T 3i53_A 184 LSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILR-RCAE 262 (332)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhccCCHHHHHHHHH-HHHH
Confidence 567899999999999999999998875 47999999 778888 699999999999999999999999 9999
Q ss_pred hCCCCC-----C----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 72 SIPSND-----E----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 72 al~~~g-----~----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+|+||| + .......+|+.|+...+|++||.+||+++|++|||+++++.+.++ .++||+++
T Consensus 263 ~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 263 AAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred hcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC-cEEEEEee
Confidence 999999 1 112236789999888899999999999999999999999999988 99999985
No 6
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.92 E-value=2e-24 Score=166.72 Aligned_cols=130 Identities=22% Similarity=0.372 Sum_probs=115.1
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-----CCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCC
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-----TNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIP 74 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-----~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~ 74 (132)
+..+++++|+++++++|+|.++..... .+||+++. +++++|++|+|+++++||+|+|+++.++|+ +++++|+
T Consensus 199 ~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~-~~~~~Lk 277 (348)
T 3lst_A 199 LLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRILT-NCRRVMP 277 (348)
T ss_dssp HHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHH-HHHHTCC
T ss_pred HHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCCHHHHHHHHH-HHHHhcC
Confidence 568899999999999999999883221 57899998 778888999999999999999999999999 9999999
Q ss_pred CCC-----C-------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 75 SND-----E-------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 75 ~~g-----~-------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
||| + .+.....+|+.|+...+|++||.+||+++|++|||+++++.+..+..++||++|
T Consensus 278 pgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 278 AHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp TTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred CCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 999 1 122346789999888899999999999999999999999999878899999987
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.92 E-value=2.1e-24 Score=167.04 Aligned_cols=130 Identities=45% Similarity=0.756 Sum_probs=116.9
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcCCCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCC---C
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWGTNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPS---N 76 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~---~ 76 (132)
+..+++++|+++++++|+|.+++.+++..+|+++. +++++|.+|+|+++++||+|+|+++.++|+ +++++|+| |
T Consensus 208 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~-~~~~~L~p~~~g 286 (358)
T 1zg3_A 208 TKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILK-NSKEAISHKGKD 286 (358)
T ss_dssp HHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHH-HHHHHTGGGGGG
T ss_pred HHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCCCCCCceEEEEcccccCCCHHHHHHHHH-HHHHhCCCCCCC
Confidence 57889999999999999999999888766799998 888888899999999999999999999999 99999999 8
Q ss_pred C---------CC-C------cchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 77 D---------EG-R------KTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 77 g---------~~-~------~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
| +. . .....+|+.|+...+|++||.+||+++|++|||+.+++.+.++..++||++|
T Consensus 287 G~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 287 GKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp CEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred cEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 8 11 1 2346788888887789999999999999999999999999888899999997
No 8
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.90 E-value=1.2e-23 Score=160.95 Aligned_cols=130 Identities=19% Similarity=0.235 Sum_probs=115.9
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccccCCC-ceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEAIPP-ANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++|+++++++|+|.+++.+++ .+||+++. +++++|+ +|+|++++++|+|+|+++.++|+ ++++
T Consensus 182 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~-~~~~ 260 (334)
T 2ip2_A 182 TKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLG-NCRE 260 (334)
T ss_dssp HHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCCHHHHHHHHH-HHHH
T ss_pred HHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCCHHHHHHHHH-HHHH
Confidence 567899999999999999999998875 47999998 8888875 99999999999999999999999 9999
Q ss_pred hCCCCC-----C-------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 72 SIPSND-----E-------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 72 al~~~g-----~-------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+|+||| + .+.....+|+.|+...+|++||.+||++++++|||+++++.+.++..++||++|
T Consensus 261 ~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 261 AMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred hcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 999999 1 122346788888877789999999999999999999999999988899999986
No 9
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.90 E-value=1.5e-23 Score=161.82 Aligned_cols=129 Identities=47% Similarity=0.828 Sum_probs=114.9
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcCCCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCC---C
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWGTNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPS---N 76 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~---~ 76 (132)
+..+++++|+++++++|+|.+++.+++.++++++. +++++|.+|+|+++++||+|+|+++.++|+ +++++|+| |
T Consensus 203 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~-~~~~~L~p~~~g 281 (352)
T 1fp2_A 203 AKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILK-KCKEAVTNDGKR 281 (352)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHH-HHHHHHSGGGCC
T ss_pred HHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCCCccEEEeehhhccCCHHHHHHHHH-HHHHhCCCCCCC
Confidence 56789999999999999999999998866799998 888888899999999999999999999999 99999999 9
Q ss_pred C---------CC-C------cchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 77 D---------EG-R------KTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 77 g---------~~-~------~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
| +. . .....+|+.|+. .+|++||.+||+++|++|||+.+++.+.++..++||++|
T Consensus 282 G~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 282 GKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp CEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-GTCCCEEHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEeecCCCCCccchhhhHhhccHHHHh-ccCCCCCHHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 8 11 1 123467888887 669999999999999999999999999888899999997
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.89 E-value=6.1e-23 Score=159.60 Aligned_cols=130 Identities=23% Similarity=0.381 Sum_probs=114.0
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcCCCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC--
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWGTNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSND-- 77 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g-- 77 (132)
+..+++++|+++++++|+|.+++.+++.++|+++. +++++|.+|+|+++++||+|+|+++.++|+ +++++|+|||
T Consensus 224 ~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~-~~~~~L~pgG~l 302 (372)
T 1fp1_D 224 LELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLS-NCHKALSPNGKV 302 (372)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHHH-HHHHHEEEEEEE
T ss_pred HHHHHHHCCCCeEEEeChHHHHHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHHH-HHHHhcCCCCEE
Confidence 56789999999999999999999998877899998 888888899999999999999999999999 9999999999
Q ss_pred -------CCC-c------chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe-cCCcceEEEEEC
Q 043665 78 -------EGR-K------TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP-NLGLWSLIEAYP 132 (132)
Q Consensus 78 -------~~~-~------~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~~ie~~p 132 (132)
+.. . ....+|+.|+...+|++||.+||+++|++|||+++++.+ ..+..++||++|
T Consensus 303 ~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 303 IIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred EEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 111 1 245788888876689999999999999999999999988 445259999997
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.89 E-value=7.4e-23 Score=158.86 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=108.5
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--cccc---CC-CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEA---IP-PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~---~P-~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++++|+++++++|+|.+++.+++ .+||+++. ++++ +| ++|+|+++++||+|+|+++.++|+ +
T Consensus 194 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~-~ 272 (363)
T 3dp7_A 194 ATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILT-R 272 (363)
T ss_dssp HHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHH-H
T ss_pred HHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHH-H
Confidence 568999999999999999999998875 26899999 8874 77 499999999999999999999999 9
Q ss_pred hhhhCCCCC-----C----CC-cch-------hhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCC-cceEEEE
Q 043665 69 CEESIPSND-----E----GR-KTQ-------LCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG-LWSLIEA 130 (132)
Q Consensus 69 ~~~al~~~g-----~----~~-~~~-------~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~-~~~~ie~ 130 (132)
++++|+||| + .. ... ...++.|+...+|++||.+||+++|++|||+++++.+..+ ..++||+
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~ 352 (363)
T 3dp7_A 273 VAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQC 352 (363)
T ss_dssp HHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEE
T ss_pred HHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEE
Confidence 999999999 1 11 111 2233444555678999999999999999999999987654 5999999
Q ss_pred EC
Q 043665 131 YP 132 (132)
Q Consensus 131 ~p 132 (132)
+|
T Consensus 353 ~~ 354 (363)
T 3dp7_A 353 RL 354 (363)
T ss_dssp EE
T ss_pred ee
Confidence 75
No 12
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.85 E-value=2.7e-21 Score=148.71 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=109.1
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--cccc---CCC-ceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEA---IPP-ANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~---~P~-~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++++|+++++++|+|.+++.+++ .+||+++. ++++ .|+ +|+|+++++||+|+|+++.++|+ +
T Consensus 194 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~-~ 272 (352)
T 3mcz_A 194 LAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIG-H 272 (352)
T ss_dssp HHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHH-H
T ss_pred HHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHH-H
Confidence 567899999999999999999988875 36899998 7774 565 99999999999999999999999 9
Q ss_pred hhhhCCCCC---------C----CCcchhhhhhhhhhcC-CCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 69 CEESIPSND---------E----GRKTQLCFDLLMATFL-NGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 69 ~~~al~~~g---------~----~~~~~~~~dl~m~~~~-~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
++++|+||| + .+.....+|+.|+... +|++||.+||+++|++|||++++.. .+..+++++++
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 273 AAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp HHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred HHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 999999999 1 1223567899988754 7999999999999999999998843 35688888774
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.84 E-value=7.6e-21 Score=146.59 Aligned_cols=130 Identities=25% Similarity=0.397 Sum_probs=113.1
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccccCCC-ceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEAIPP-ANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++|+++++.+|+|.+++.+++ .+|++++. +++++|. +|+|++++++|+|+|+++.++|+ ++++
T Consensus 198 ~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~-~~~~ 276 (360)
T 1tw3_A 198 AAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILT-RCAE 276 (360)
T ss_dssp HHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccccCCCHHHHHHHHH-HHHH
Confidence 567899999999999999999998875 35899998 7787885 99999999999999999999999 9999
Q ss_pred hCCCCC-----C-C--Cc-----chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCc-----ceEEEEEC
Q 043665 72 SIPSND-----E-G--RK-----TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGL-----WSLIEAYP 132 (132)
Q Consensus 72 al~~~g-----~-~--~~-----~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~-----~~~ie~~p 132 (132)
+|+||| + . +. ....+|+.|+...+|+.||.+||+++|++|||+++++.+.++. .++||++|
T Consensus 277 ~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 277 ALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp TEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred hcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 999999 2 2 21 2346788888777899999999999999999999999888665 89999985
No 14
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.83 E-value=2.1e-20 Score=144.68 Aligned_cols=130 Identities=23% Similarity=0.280 Sum_probs=113.5
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccccCCC-ceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFEAIPP-ANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++|+++++++|+|.+++.+++ .+||+++. +++++|. +|+|++++++|+|+|+++.++|+ ++++
T Consensus 197 ~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~-~~~~ 275 (374)
T 1qzz_A 197 LAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILR-GCVR 275 (374)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCCCHHHHHHHHH-HHHH
Confidence 567899999999999999999998875 35899998 7788885 99999999999999999999999 9999
Q ss_pred hCCCCC-----CC----Cc-----chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcc-----eEEEEEC
Q 043665 72 SIPSND-----EG----RK-----TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLW-----SLIEAYP 132 (132)
Q Consensus 72 al~~~g-----~~----~~-----~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~-----~~ie~~p 132 (132)
+|+||| +. +. ....+|+.|+...+|+.||.++|.++|+++||+++++.+.++.. ++||++|
T Consensus 276 ~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 276 ALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred hcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 999999 22 11 23467888887778999999999999999999999999988777 9999974
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.82 E-value=9.1e-20 Score=138.90 Aligned_cols=129 Identities=18% Similarity=0.214 Sum_probs=111.8
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..+++++|+.+++++|++.+++.+++ .+|++++. +++ ++|+ +|+|++++++|+|+++++.++|+ +++
T Consensus 180 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~-~~~ 258 (335)
T 2r3s_A 180 GIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHHFDVATCEQLLR-KIK 258 (335)
T ss_dssp HHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGGSCHHHHHHHHH-HHH
T ss_pred HHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhccCCHHHHHHHHH-HHH
Confidence 567899999999999999988888875 35899998 776 6665 99999999999999999999999 999
Q ss_pred hhCCCCC-----C----C----CcchhhhhhhhhhcC-CCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEE
Q 043665 71 ESIPSND-----E----G----RKTQLCFDLLMATFL-NGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAY 131 (132)
Q Consensus 71 ~al~~~g-----~----~----~~~~~~~dl~m~~~~-~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~ 131 (132)
++|+||| + . +.....+|+.|+... +|+.||.+||.++++++||+.+++.+..+..++|+++
T Consensus 259 ~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 259 TALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEECCCCceeEEEe
Confidence 9999999 1 1 123467888888766 8999999999999999999999999998888888775
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.81 E-value=3.2e-19 Score=137.78 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=106.5
Q ss_pred HHHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCCCceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIPPANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++|+++++++|+|.+++.+++ .+|++++. +++ ++|++|+|++++++|+|+|+++.++|+ ++++
T Consensus 205 ~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~-~~~~ 283 (359)
T 1x19_A 205 SAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCK-KAFD 283 (359)
T ss_dssp HHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHH-HHHT
T ss_pred HHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhccCCHHHHHHHHH-HHHH
Confidence 567899999999999999999998874 46899998 776 566689999999999999999999999 9999
Q ss_pred hCCCCC-----C----C---Ccchhhhhhhhhhc-CCCcc----CCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 72 SIPSND-----E----G---RKTQLCFDLLMATF-LNGKE----GSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 72 al~~~g-----~----~---~~~~~~~dl~m~~~-~~g~~----rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+|+||| + . +.....+ .|+.. .+|++ ||.+||+++|++|||+++++.+.+ ..++||++|
T Consensus 284 ~L~pgG~l~i~e~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 284 AMRSGGRLLILDMVIDDPENPNFDYLS--HYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp TCCTTCEEEEEEECCCCTTSCCHHHHH--HHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred hcCCCCEEEEEecccCCCCCchHHHHH--HHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 999999 1 1 1112223 44443 45888 999999999999999999999887 789999986
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.39 E-value=6e-12 Score=90.86 Aligned_cols=129 Identities=9% Similarity=0.087 Sum_probs=94.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
+..+++++|+.+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++..++|.+++++...+|+ ++++.
T Consensus 59 ~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~ 137 (234)
T 3dtn_A 59 SAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHLEDEDKKELYK-RSYSI 137 (234)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGSCHHHHHHHHH-HHHHH
T ss_pred HHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccCCHHHHHHHHH-HHHHh
Confidence 467889999999999999 888888775 34899888 554 333 499999999999999999999999 99999
Q ss_pred CCCCC-----C--CCcc---h----hhh------------hhhh-hh-cCCCccCCHHHHHHHHHhCCCeeeEEEecCCc
Q 043665 73 IPSND-----E--GRKT---Q----LCF------------DLLM-AT-FLNGKEGSVYDWKKLFLAAGFSHYKITPNLGL 124 (132)
Q Consensus 73 l~~~g-----~--~~~~---~----~~~------------dl~m-~~-~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~ 124 (132)
|+||| + .+.. . ..+ ++.- +. ......+|.++|.++|++|||+.+++......
T Consensus 138 LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~ 217 (234)
T 3dtn_A 138 LKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQ 217 (234)
T ss_dssp EEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETT
T ss_pred cCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecc
Confidence 99999 1 1110 0 000 0000 00 02344578999999999999999998766555
Q ss_pred ceEEEEE
Q 043665 125 WSLIEAY 131 (132)
Q Consensus 125 ~~~ie~~ 131 (132)
.+++-.+
T Consensus 218 ~~~~~~~ 224 (234)
T 3dtn_A 218 FAVMFGR 224 (234)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 5555443
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.30 E-value=1.6e-11 Score=91.48 Aligned_cols=118 Identities=19% Similarity=0.141 Sum_probs=85.8
Q ss_pred HHHHHHHC--CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCCCceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAF--PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIPPANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~--P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++++ |+.+++.+|+ |.+++.|++ ..+|+++. +.+ +.+.+|++++..+||.+++++...+|+ +
T Consensus 85 ~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~~~~~~~~~~~l~-~ 163 (261)
T 4gek_A 85 TLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLD-K 163 (261)
T ss_dssp HHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGGGSCHHHHHHHHH-H
T ss_pred HHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeeeecCchhHhHHHH-H
Confidence 34567764 7889999998 888998875 46899988 555 555799999999999999999999999 9
Q ss_pred hhhhCCCCC-----C--CCc---c-hhhhhhhh-hhcCC-----------------CccCCHHHHHHHHHhCCCeeeEEE
Q 043665 69 CEESIPSND-----E--GRK---T-QLCFDLLM-ATFLN-----------------GKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 69 ~~~al~~~g-----~--~~~---~-~~~~dl~m-~~~~~-----------------g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
++++|+||| + ... . ....++.. +...+ -...|.+++.++|++|||+.++++
T Consensus 164 i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 164 IYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEE
Confidence 999999999 1 111 0 11111110 00001 123688999999999999988875
Q ss_pred e
Q 043665 120 P 120 (132)
Q Consensus 120 ~ 120 (132)
-
T Consensus 244 f 244 (261)
T 4gek_A 244 F 244 (261)
T ss_dssp E
T ss_pred E
Confidence 3
No 19
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.16 E-value=1.6e-10 Score=86.51 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=84.9
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--cccc------------CC--CceEEEehhhhcCCChHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFEA------------IP--PANVVLLKWILHDWSDEES 61 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~~------------~P--~~D~~ll~~vlh~~~de~~ 61 (132)
..+.+.+|+.+++.+|+ |.+++.+++ .+|++++. ++++ ++ .+|++++..+||.++|++.
T Consensus 96 ~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~ 175 (274)
T 2qe6_A 96 EVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVV 175 (274)
T ss_dssp HHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTH
T ss_pred HHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHH
Confidence 34567789999999999 899998876 47899998 6541 33 5899999999999999989
Q ss_pred HHHHHHHhhhhCCCCC-----C-CC---c-chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeE
Q 043665 62 LRYLKKKCEESIPSND-----E-GR---K-TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g-----~-~~---~-~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
..+|+ +++++|+||| . .. . .....+........+..||.+|+.++| +||++.+
T Consensus 176 ~~~l~-~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 176 DRVVG-AYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HHHHH-HHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--TTCEECT
T ss_pred HHHHH-HHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--CCCeEcc
Confidence 99999 9999999999 1 11 1 111222222222356679999999999 5998765
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.16 E-value=4.3e-10 Score=80.24 Aligned_cols=125 Identities=11% Similarity=0.045 Sum_probs=87.1
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC--CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG--TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~ 75 (132)
..++++ +.+++.+|. |..++.+++ .++++++. +.+ +.+ .+|++++.+++|.+++.+...+|+ ++++.|+|
T Consensus 61 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~Lkp 137 (220)
T 3hnr_A 61 NKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYAFHHLTDDEKNVAIA-KYSQLLNK 137 (220)
T ss_dssp HHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESCGGGSCHHHHHHHHH-HHHHHSCT
T ss_pred HHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcchhcCChHHHHHHHH-HHHHhcCC
Confidence 345554 678999998 778888776 34888887 544 343 499999999999999999888999 99999999
Q ss_pred CC------C-CCcchhhhhhhhhhcCC-----------CccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEE
Q 043665 76 ND------E-GRKTQLCFDLLMATFLN-----------GKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAY 131 (132)
Q Consensus 76 ~g------~-~~~~~~~~dl~m~~~~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~ 131 (132)
|| + ................. ...+|.++|.++|+++||+++.+... +...++++.
T Consensus 138 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~-~~~w~~~~~ 210 (220)
T 3hnr_A 138 GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN-HFVWVMEAT 210 (220)
T ss_dssp TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS-SSEEEEEEE
T ss_pred CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc-ceEEEEeeh
Confidence 99 1 11111111000000001 13358999999999999987776654 566666654
No 21
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.14 E-value=1.5e-10 Score=82.78 Aligned_cols=127 Identities=9% Similarity=-0.087 Sum_probs=91.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..+++.+| +++.+|+ |.+++.+++ ..+++++. +.+ +++ .+|++++.+++|.+..++...+|+ +++
T Consensus 53 ~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~-~~~ 129 (227)
T 1ve3_A 53 SFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFK-EVR 129 (227)
T ss_dssp HHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHH-HHH
T ss_pred HHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHH-HHH
Confidence 355677777 8999998 888888775 37888888 555 454 399999999988888888899999 999
Q ss_pred hhCCCCC------CC-C-cchh-------hhhhhhh---hcCC------------------CccCCHHHHHHHHHhCCCe
Q 043665 71 ESIPSND------EG-R-KTQL-------CFDLLMA---TFLN------------------GKEGSVYDWKKLFLAAGFS 114 (132)
Q Consensus 71 ~al~~~g------~~-~-~~~~-------~~dl~m~---~~~~------------------g~~rt~~e~~~ll~~aGf~ 114 (132)
+.|+||| +. . .... ..+..+. .... +..++ .+|.++|+++||+
T Consensus 130 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~-~~~~~~l~~~GF~ 208 (227)
T 1ve3_A 130 RVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVWG-KTGVELLAKLYFT 208 (227)
T ss_dssp HHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECCC-HHHHHHHHTTTEE
T ss_pred HHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhhc-hHHHHHHHHHhhh
Confidence 9999999 10 0 0000 0000000 0001 11122 4899999999999
Q ss_pred eeEEEecCCcceEEEEEC
Q 043665 115 HYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 115 ~~~~~~~~~~~~~ie~~p 132 (132)
.+++.++++..++|+++|
T Consensus 209 ~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 209 KEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp EEEEEEETTTEEEEEEEE
T ss_pred HHHHHHhCCceeEEeeCC
Confidence 999999988889999987
No 22
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.08 E-value=3.3e-10 Score=81.52 Aligned_cols=128 Identities=10% Similarity=-0.036 Sum_probs=90.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC-CceEEE-ehhhhcCCC-hHHHHHHHHHHhhhhC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP-PANVVL-LKWILHDWS-DEESLRYLKKKCEESI 73 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P-~~D~~l-l~~vlh~~~-de~~~~iL~~~~~~al 73 (132)
+..+++.++ +++.+|. |..++.+++ ..+++++. +.+ +.+ .+|+++ ..+++|.++ .++...+|+ ++++.|
T Consensus 55 ~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~-~~~~~L 131 (239)
T 3bxo_A 55 LEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTEELGAAVA-SFAEHL 131 (239)
T ss_dssp HHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHHHHHHHHH-HHHHTE
T ss_pred HHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHHHHHHHHH-HHHHhc
Confidence 355677766 7899999 888888876 56788887 544 334 499999 456888874 477899999 999999
Q ss_pred CCCC-----C--CCcc--h---------------------------hhhhhhhhhcC-CC-----------ccCCHHHHH
Q 043665 74 PSND-----E--GRKT--Q---------------------------LCFDLLMATFL-NG-----------KEGSVYDWK 105 (132)
Q Consensus 74 ~~~g-----~--~~~~--~---------------------------~~~dl~m~~~~-~g-----------~~rt~~e~~ 105 (132)
+||| + .++. . ...++.++... ++ +.+|.+||+
T Consensus 132 ~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 211 (239)
T 3bxo_A 132 EPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYE 211 (239)
T ss_dssp EEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHH
T ss_pred CCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHH
Confidence 9999 1 1100 0 00112222211 22 347999999
Q ss_pred HHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 106 KLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 106 ~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
++|++|||++..+....+...++.++|
T Consensus 212 ~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 212 AAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp HHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred HHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 999999998888776666788888874
No 23
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.06 E-value=8.8e-10 Score=82.94 Aligned_cols=124 Identities=8% Similarity=0.043 Sum_probs=86.2
Q ss_pred HHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCC-hHHHHHHHHHHhhhhC
Q 043665 7 TAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWS-DEESLRYLKKKCEESI 73 (132)
Q Consensus 7 ~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~-de~~~~iL~~~~~~al 73 (132)
..+|+.+++.+|+ |..++.+++ .+|++++. +.+ +.++ +|++++..++|.++ ++....+|+ ++++.|
T Consensus 139 ~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~-~~~~~L 217 (305)
T 3ocj_A 139 SACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGLNIYEPDDARVTELYR-RFWQAL 217 (305)
T ss_dssp TTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSSGGGCCCHHHHHHHHH-HHHHHE
T ss_pred hcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECChhhhcCCHHHHHHHHH-HHHHhc
Confidence 5789999999999 888888775 35699988 554 3444 99999999999995 455668999 999999
Q ss_pred CCCC-----C---CC--cchhh-----hh--------hhhhhcCCC---ccCCHHHHHHHHHhCCCeeeEEEecC-Ccce
Q 043665 74 PSND-----E---GR--KTQLC-----FD--------LLMATFLNG---KEGSVYDWKKLFLAAGFSHYKITPNL-GLWS 126 (132)
Q Consensus 74 ~~~g-----~---~~--~~~~~-----~d--------l~m~~~~~g---~~rt~~e~~~ll~~aGf~~~~~~~~~-~~~~ 126 (132)
+||| . .+ ..... .+ ..+....++ ..+|.+++.++|+++||+++++.... +...
T Consensus 218 kpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~ 297 (305)
T 3ocj_A 218 KPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFP 297 (305)
T ss_dssp EEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSC
T ss_pred CCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceee
Confidence 9999 1 10 00000 00 000001111 34799999999999999999988653 3444
Q ss_pred EEEEE
Q 043665 127 LIEAY 131 (132)
Q Consensus 127 ~ie~~ 131 (132)
.+.++
T Consensus 298 ~v~a~ 302 (305)
T 3ocj_A 298 TVIAR 302 (305)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55554
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.05 E-value=3.2e-09 Score=75.59 Aligned_cols=123 Identities=12% Similarity=0.088 Sum_probs=90.3
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++.+ |+.+++.+|. |..++.++. .+++++.. +.+ +++ .+|++++.+++|.++| ...+|+ +
T Consensus 52 ~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~ 128 (219)
T 3dh0_A 52 LPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSE--PLKFLE-E 128 (219)
T ss_dssp HHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSS--HHHHHH-H
T ss_pred HHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCC--HHHHHH-H
Confidence 45677776 8899999998 788888765 25798888 444 444 3999999999999976 478999 9
Q ss_pred hhhhCCCCCC-----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 69 CEESIPSNDE-----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 69 ~~~al~~~g~-----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+++.|+|||- ......... ......++.++|.++++++||+++++...++....+.+++
T Consensus 129 ~~~~LkpgG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 129 LKRVAKPFAYLAIIDWKKEERDKG-----PPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHEEEEEEEEEEEECSSCCSSS-----CCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHhCCCeEEEEEEecccccccC-----CchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 9999999981 000000000 0112346899999999999999999988877766666553
No 25
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.03 E-value=1.4e-09 Score=81.47 Aligned_cols=128 Identities=9% Similarity=0.039 Sum_probs=88.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----C----CCeEEEe--ccc-cCCC-ceEEEe-hhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----T----NNLEFFL--EFE-AIPP-ANVVLL-KWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~----~ri~~~~--~~~-~~P~-~D~~ll-~~vlh~~~de~~~~iL~ 66 (132)
+..++++ +.+++.+|+ |..++.+++ . .+++++. +.+ +.++ +|++++ ..++|.+++++...+|+
T Consensus 97 ~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~ 174 (299)
T 3g2m_A 97 TFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGSINELDEADRRGLYA 174 (299)
T ss_dssp HHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcccccCCHHHHHHHHH
Confidence 3455555 578999998 788888875 1 6899998 555 4454 998885 58888889889999999
Q ss_pred HHhhhhCCCCC------CCCc-------c---------hhhh-------------hhhhhh-----------cCCCccCC
Q 043665 67 KKCEESIPSND------EGRK-------T---------QLCF-------------DLLMAT-----------FLNGKEGS 100 (132)
Q Consensus 67 ~~~~~al~~~g------~~~~-------~---------~~~~-------------dl~m~~-----------~~~g~~rt 100 (132)
++++.|+||| ..+. . ...+ .+.+.. ...-+.+|
T Consensus 175 -~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 253 (299)
T 3g2m_A 175 -SVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLA 253 (299)
T ss_dssp -HHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEEC
T ss_pred -HHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeC
Confidence 9999999999 0000 0 0000 000000 00112469
Q ss_pred HHHHHHHHHhCCCeeeEEEecCC------cceEEEEEC
Q 043665 101 VYDWKKLFLAAGFSHYKITPNLG------LWSLIEAYP 132 (132)
Q Consensus 101 ~~e~~~ll~~aGf~~~~~~~~~~------~~~~ie~~p 132 (132)
.+||+++|++|||+++++.+... ...++|+.+
T Consensus 254 ~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 254 PDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 99999999999999999987642 357888763
No 26
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.02 E-value=1e-09 Score=80.49 Aligned_cols=127 Identities=13% Similarity=0.014 Sum_probs=89.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCCC-ceEEEehh-hhcCCCh-HHHHHHHHHHhhhhCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIPP-ANVVLLKW-ILHDWSD-EESLRYLKKKCEESIP 74 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P~-~D~~ll~~-vlh~~~d-e~~~~iL~~~~~~al~ 74 (132)
..++++. .+++.+|+ |..++.+++ ..+++++. +.+ +.++ +|++++.. ++|.+++ ++...+|+ ++++.|+
T Consensus 66 ~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~-~~~~~L~ 142 (263)
T 3pfg_A 66 RHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALE-RFAAHVL 142 (263)
T ss_dssp HHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHHHHHHHH-HHHHTEE
T ss_pred HHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHHHHHHHH-HHHHhcC
Confidence 4455554 47899999 888888877 56899887 554 3444 99999997 9999865 67889999 9999999
Q ss_pred CCC----C---CCc-c----------------------------hhhhhhhhhhcC-C-----------CccCCHHHHHH
Q 043665 75 SND----E---GRK-T----------------------------QLCFDLLMATFL-N-----------GKEGSVYDWKK 106 (132)
Q Consensus 75 ~~g----~---~~~-~----------------------------~~~~dl~m~~~~-~-----------g~~rt~~e~~~ 106 (132)
||| . .+. . ...+++.+.... + .+.+|.+||++
T Consensus 143 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ 222 (263)
T 3pfg_A 143 PDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYER 222 (263)
T ss_dssp EEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHH
T ss_pred CCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHH
Confidence 999 1 000 0 001122222111 1 23468999999
Q ss_pred HHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 107 LFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 107 ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
+|++|||+++++....+...++.+++
T Consensus 223 ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 223 AFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp HHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred HHHHCCCEEEEeeCCCCCceeEEEec
Confidence 99999999999977666666666653
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.01 E-value=3.3e-09 Score=78.73 Aligned_cols=118 Identities=11% Similarity=0.122 Sum_probs=86.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe-ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL-EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~-~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..++++++. +++.+|+ |..++.+++ .++++++. -+.++| .+|++++..++|++++++...+|+ ++++
T Consensus 79 ~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~ 156 (287)
T 1kpg_A 79 MMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEHFGHERYDAFFS-LAHR 156 (287)
T ss_dssp HHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGGTCTTTHHHHHH-HHHH
T ss_pred HHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhhcChHHHHHHHH-HHHH
Confidence 4566766654 9999998 778887765 35888887 334455 499999999999998878899999 9999
Q ss_pred hCCCCCC-------CCc-ch-------------hhhhhh-hhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 72 SIPSNDE-------GRK-TQ-------------LCFDLL-MATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 72 al~~~g~-------~~~-~~-------------~~~dl~-m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.|+|||- ... .. ...+.. .....++..+|.++|.++++++||+++++...
T Consensus 157 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 157 LLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred hcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 9999991 000 00 011111 11224677789999999999999999988765
No 28
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.01 E-value=1e-09 Score=80.92 Aligned_cols=117 Identities=15% Similarity=0.226 Sum_probs=87.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++.+|+.+++.+|. |..++.+++ .++++++. +.+ +.+ .+|+|++.+++|.++|.. .+|+ ++
T Consensus 52 ~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~l~-~~ 128 (276)
T 3mgg_A 52 TVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPE--EALK-SL 128 (276)
T ss_dssp HHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHH--HHHH-HH
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHH--HHHH-HH
Confidence 467888999999999998 778887765 35788887 554 444 399999999999998864 8899 99
Q ss_pred hhhCCCCC-----C--C------Ccch---hhhhhh--hhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 70 EESIPSND-----E--G------RKTQ---LCFDLL--MATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 70 ~~al~~~g-----~--~------~~~~---~~~dl~--m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
++.|+||| . . +... ..++.. +....++..++..++.++|++|||+++++.+.
T Consensus 129 ~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 129 KKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 99999999 1 0 1111 111111 11224667788899999999999999887643
No 29
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.98 E-value=3.3e-09 Score=77.29 Aligned_cols=117 Identities=10% Similarity=0.031 Sum_probs=87.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++ +.+++.+|+ |..++.+++ .++++++. +.+ ++| .+|++++.+++|.+++++...+|+ ++++
T Consensus 70 ~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~ 147 (266)
T 3ujc_A 70 CMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQ-KCYK 147 (266)
T ss_dssp HHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHH-HHHH
Confidence 45677777 789999998 778888876 26899888 544 554 399999999999999999999999 9999
Q ss_pred hCCCCC-----C---CC--cchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 72 SIPSND-----E---GR--KTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 72 al~~~g-----~---~~--~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.|+||| . .. .....+.- .....+...+|.++|.++++++||+++++...
T Consensus 148 ~L~pgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 148 WLKPTGTLLITDYCATEKENWDDEFKE-YVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp HEEEEEEEEEEEEEESCGGGCCHHHHH-HHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred HcCCCCEEEEEEeccCCcccchHHHHH-HHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 999999 1 11 11111111 11112445689999999999999999888765
No 30
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.98 E-value=5e-10 Score=79.24 Aligned_cols=123 Identities=15% Similarity=0.088 Sum_probs=86.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..++++ |+.+++.+|. |..++.++. .++++++. +.+ +++ .+|++++.+++|.+++ ...+|+ +
T Consensus 58 ~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~--~~~~l~-~ 133 (219)
T 3dlc_A 58 SIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWED--VATAFR-E 133 (219)
T ss_dssp HHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSC--HHHHHH-H
T ss_pred HHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccC--HHHHHH-H
Confidence 3456666 8899999998 888887775 35899888 555 555 3999999999999966 467999 9
Q ss_pred hhhhCCCCC------CC-Cc-chh-----hhh----hhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEE
Q 043665 69 CEESIPSND------EG-RK-TQL-----CFD----LLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLI 128 (132)
Q Consensus 69 ~~~al~~~g------~~-~~-~~~-----~~d----l~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i 128 (132)
+++.|+||| .. .. ... ... ...........+|.++|.++|+++||+.+++........++
T Consensus 134 ~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~ 210 (219)
T 3dlc_A 134 IYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIILGDEGFWII 210 (219)
T ss_dssp HHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEETTEEEEE
T ss_pred HHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEecCCceEEE
Confidence 999999999 11 11 000 000 00000012334578999999999999999988765554443
No 31
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.95 E-value=5.9e-09 Score=73.83 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=81.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC--CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG--TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~ 75 (132)
..+++. +.+++.+|. |..++.++. ..+++++. +.+..+ .+|++++.+++|.+++++...+|+ ++++.|+|
T Consensus 62 ~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~-~~~~~L~p 138 (218)
T 3ou2_A 62 RHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPDDRFEAFWE-SVRSAVAP 138 (218)
T ss_dssp HHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCHHHHHHHHH-HHHHHEEE
T ss_pred HHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCHHHHHHHHH-HHHHHcCC
Confidence 445555 668999998 778888876 36899888 555444 499999999999999998999999 99999999
Q ss_pred CC-------CCCc--chhhhh---hhhh--hcCCCc-------cCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 76 ND-------EGRK--TQLCFD---LLMA--TFLNGK-------EGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 76 ~g-------~~~~--~~~~~d---l~m~--~~~~g~-------~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
|| ..+. ....+. ...+ ....+. ..|.++|.++++++||++......+
T Consensus 139 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~ 206 (218)
T 3ou2_A 139 GGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEVHP 206 (218)
T ss_dssp EEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEEET
T ss_pred CeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeeccc
Confidence 99 1111 011110 0000 011222 3599999999999999965554443
No 32
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.93 E-value=2.5e-09 Score=75.40 Aligned_cols=120 Identities=8% Similarity=-0.084 Sum_probs=87.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~ 75 (132)
..++++ +.+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|.+++++...+|+ ++++.|+|
T Consensus 57 ~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~L~p 133 (203)
T 3h2b_A 57 GHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALV-ALRMAVED 133 (203)
T ss_dssp HHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHH-HHHHTEEE
T ss_pred HHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHH-HHHHHcCC
Confidence 345554 568999998 778888877 67898888 544 444 399999999999999888999999 99999999
Q ss_pred CCC------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCC-cceEE
Q 043665 76 NDE------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG-LWSLI 128 (132)
Q Consensus 76 ~g~------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~-~~~~i 128 (132)
||- .......++ ........++.++|.++|+++||+++++....+ +...+
T Consensus 134 gG~l~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l 190 (203)
T 3h2b_A 134 GGGLLMSFFSGPSLEPMY---HPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYL 190 (203)
T ss_dssp EEEEEEEEECCSSCEEEC---CSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEE
T ss_pred CcEEEEEEccCCchhhhh---chhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhh
Confidence 991 111100000 001234568999999999999999999876644 34433
No 33
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.92 E-value=3.2e-09 Score=77.05 Aligned_cols=114 Identities=15% Similarity=0.189 Sum_probs=83.8
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
..++++. ..+++.+|. |..++.+++ ..+++++. +.+ +++ .+|++++.+++|++++++...+|+ ++++.
T Consensus 109 ~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~ 186 (254)
T 1xtp_A 109 KNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFK-HCQQA 186 (254)
T ss_dssp HHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHH-HHHHH
T ss_pred HHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHH-HHHHh
Confidence 3445554 457899997 778888876 25788887 444 444 399999999999999999999999 99999
Q ss_pred CCCCCC-------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 73 IPSNDE-------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 73 l~~~g~-------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
|+|||- ........+ .......+|.++|.++|+++||+++++....
T Consensus 187 LkpgG~l~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 187 LTPNGYIFFKENCSTGDRFLVD----KEDSSLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEEEEEEEEEEBC--CCEEEE----TTTTEEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred cCCCeEEEEEecCCCcccceec----ccCCcccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 999991 111111111 1123446899999999999999999886653
No 34
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.91 E-value=1.1e-08 Score=76.27 Aligned_cols=116 Identities=11% Similarity=0.098 Sum_probs=82.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++++ +.+++.+|+ |..++.+++ .++++++. +.+ +++ .+|+|++.+++|+++| ...+|+ +
T Consensus 97 ~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~ 172 (297)
T 2o57_A 97 ARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD--KLKVFQ-E 172 (297)
T ss_dssp HHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSC--HHHHHH-H
T ss_pred HHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCC--HHHHHH-H
Confidence 34566665 469999999 777777764 36899988 555 554 3999999999999988 689999 9
Q ss_pred hhhhCCCCC------C---CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 69 CEESIPSND------E---GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 69 ~~~al~~~g------~---~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+++.|+||| + .......+.-.+.........|.++|.++++++||+++++...
T Consensus 173 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 173 CARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp HHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 999999999 1 1111111111111111233568999999999999999988764
No 35
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.89 E-value=1e-08 Score=75.31 Aligned_cols=116 Identities=15% Similarity=0.041 Sum_probs=85.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++++ +.+++.+|+ |..++.+++ .+|++++. +.+ +++ .+|++++..++|.++|. ..+|+ +
T Consensus 76 ~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~ 151 (273)
T 3bus_A 76 AVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDR--GRALR-E 151 (273)
T ss_dssp HHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCH--HHHHH-H
T ss_pred HHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCH--HHHHH-H
Confidence 34566666 689999999 777777764 45899988 554 554 39999999999999775 68999 9
Q ss_pred hhhhCCCCC-----C----CCcc---hhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 69 CEESIPSND-----E----GRKT---QLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 69 ~~~al~~~g-----~----~~~~---~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+++.|+||| . .+.. ...++........+..+|.++|.++++++||+++++...
T Consensus 152 ~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 152 MARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVDI 216 (273)
T ss_dssp HHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEEC
Confidence 999999999 1 1111 111221111123567799999999999999999888765
No 36
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.89 E-value=1.2e-08 Score=76.95 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=86.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe-ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL-EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~-~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++++ +.+++.+|+ |..++.+++ .++++++. -+..+| .+|+++...++|.+++++...+|+ ++++
T Consensus 105 ~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~ 182 (318)
T 2fk8_A 105 MRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFK-RCFN 182 (318)
T ss_dssp HHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGGTCGGGHHHHHH-HHHH
T ss_pred HHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHhcCHHHHHHHHH-HHHH
Confidence 45566666 569999999 778887765 25788888 444445 499999999999999888899999 9999
Q ss_pred hCCCCC------C-CCcchh--------------hhhhhh-hhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 72 SIPSND------E-GRKTQL--------------CFDLLM-ATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 72 al~~~g------~-~~~~~~--------------~~dl~m-~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.|+||| . ...... ..+... ....++..+|.+++.++++++||+++++...
T Consensus 183 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 183 IMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEEC
T ss_pred hcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEec
Confidence 999999 1 111000 011111 1124677889999999999999999887654
No 37
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.88 E-value=2.1e-08 Score=72.27 Aligned_cols=114 Identities=11% Similarity=0.050 Sum_probs=81.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC---CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG---TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESI 73 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~---~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al 73 (132)
..+++. +.+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|++++. ..+|+ ++++.|
T Consensus 69 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~~~~~L 143 (242)
T 3l8d_A 69 YKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEP--LRALN-EIKRVL 143 (242)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCH--HHHHH-HHHHHE
T ss_pred HHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccCH--HHHHH-HHHHHh
Confidence 345554 668999998 778888876 56888888 444 454 39999999999999764 58899 999999
Q ss_pred CCCC------CCCc---chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 74 PSND------EGRK---TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 74 ~~~g------~~~~---~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+||| ..+. ....+....-.......++.+++.++++++||+++++...
T Consensus 144 ~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 144 KSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp EEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 9999 1111 1111111111112345689999999999999999887643
No 38
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.87 E-value=9.6e-09 Score=79.91 Aligned_cols=116 Identities=14% Similarity=0.146 Sum_probs=85.4
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcCC--------------CCeEEEe--ccc-------cCC--CceEEEehhhhc
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWGT--------------NNLEFFL--EFE-------AIP--PANVVLLKWILH 54 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~~--------------~ri~~~~--~~~-------~~P--~~D~~ll~~vlh 54 (132)
+..+++.+ |+.+++.+|+ |..++.+++. .+++++. +.+ ++| .+|+|+...++|
T Consensus 98 ~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~ 177 (383)
T 4fsd_A 98 VYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCN 177 (383)
T ss_dssp HHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGG
T ss_pred HHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchh
Confidence 35667776 8999999999 7788887752 6899998 443 444 399999999999
Q ss_pred CCChHHHHHHHHHHhhhhCCCCC-----C---CCc--chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 55 DWSDEESLRYLKKKCEESIPSND-----E---GRK--TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 55 ~~~de~~~~iL~~~~~~al~~~g-----~---~~~--~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
.++| ...+|+ ++++.|+||| + ... .....+...+....+..++.++|.++|+++||+.+++..
T Consensus 178 ~~~d--~~~~l~-~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 178 LSTN--KLALFK-EIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp GCSC--HHHHHH-HHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred cCCC--HHHHHH-HHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 9987 468999 9999999999 1 111 111222222333456678899999999999999776543
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.87 E-value=1.1e-08 Score=73.53 Aligned_cols=117 Identities=4% Similarity=-0.111 Sum_probs=80.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC-CceEEEehh-hhcCC-ChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP-PANVVLLKW-ILHDW-SDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P-~~D~~ll~~-vlh~~-~de~~~~iL~~~~ 69 (132)
+..++++ +.+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++.+ ++|.+ ++++...+|+ ++
T Consensus 52 ~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~-~~ 128 (246)
T 1y8c_A 52 TENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFK-AV 128 (246)
T ss_dssp HHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGCCSHHHHHHHHH-HH
T ss_pred HHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccccCCHHHHHHHHH-HH
Confidence 3455555 467999998 778887775 22788887 544 344 499999998 99998 4477899999 99
Q ss_pred hhhCCCCC------CCCc-chh----------------h-----------hhhhhhhcCCC-----------ccCCHHHH
Q 043665 70 EESIPSND------EGRK-TQL----------------C-----------FDLLMATFLNG-----------KEGSVYDW 104 (132)
Q Consensus 70 ~~al~~~g------~~~~-~~~----------------~-----------~dl~m~~~~~g-----------~~rt~~e~ 104 (132)
++.|+||| +.+. ... . .++.++...+| +.+|.++|
T Consensus 129 ~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (246)
T 1y8c_A 129 SNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDI 208 (246)
T ss_dssp HTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHH
T ss_pred HHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHH
Confidence 99999999 1100 000 0 00111111122 44699999
Q ss_pred HHHHHhCCCeeeEEEec
Q 043665 105 KKLFLAAGFSHYKITPN 121 (132)
Q Consensus 105 ~~ll~~aGf~~~~~~~~ 121 (132)
.++|++|||+++++...
T Consensus 209 ~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 209 EKYLKHGQLNILDKVDC 225 (246)
T ss_dssp HHHHHHTTEEEEEEEES
T ss_pred HHHHHHCCCeEEEEEcc
Confidence 99999999999988643
No 40
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.87 E-value=2e-08 Score=72.72 Aligned_cols=114 Identities=13% Similarity=0.069 Sum_probs=81.7
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe--ccc---cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFE---AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIP 74 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~---~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~ 74 (132)
..+++. +.+++.+|+ |..++.+++. ++++. ..+ +++ .+|++++.+++|.+++++...+|+ ++++.|+
T Consensus 57 ~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~-~~~~~Lk 131 (240)
T 3dli_A 57 ELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLS-LCYSKMK 131 (240)
T ss_dssp HHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHH-HHHHHBC
T ss_pred HHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHH-HHHHHcC
Confidence 445555 557899998 7777777765 77666 333 555 399999999999999988999999 9999999
Q ss_pred CCCC------CCc-chhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 75 SNDE------GRK-TQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 75 ~~g~------~~~-~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
|||- .+. .....+. ..........+.+++.++++++||+++++....
T Consensus 132 pgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 132 YSSYIVIESPNPTSLYSLINF-YIDPTHKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp TTCCEEEEEECTTSHHHHHHH-TTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred CCcEEEEEeCCcchhHHHHHH-hcCccccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 9991 111 1111111 111123456889999999999999998876543
No 41
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.87 E-value=2.3e-08 Score=74.88 Aligned_cols=119 Identities=12% Similarity=0.098 Sum_probs=88.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe-ccccCCC-ceEEEehhhhcCCCh-------HHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL-EFEAIPP-ANVVLLKWILHDWSD-------EESLRY 64 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~-~~~~~P~-~D~~ll~~vlh~~~d-------e~~~~i 64 (132)
+..+++++| .+++.+|+ |..++.+++ .++++++. -+.++++ +|+++...++|.++| +....+
T Consensus 87 ~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~ 165 (302)
T 3hem_A 87 MRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHFADGAGDAGFERYDTF 165 (302)
T ss_dssp HHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGTTCCSSCCCTTHHHHH
T ss_pred HHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHHhcCccccccchhHHHHH
Confidence 456778777 89999999 788888775 34899888 3333354 999999999999944 678899
Q ss_pred HHHHhhhhCCCCCC-------CCcch--h--h----------hhhh-hhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 65 LKKKCEESIPSNDE-------GRKTQ--L--C----------FDLL-MATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 65 L~~~~~~al~~~g~-------~~~~~--~--~----------~dl~-m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
|+ ++++.|+|||- .+... . . .+.. -....+|..++.+++.++++++||+++++...+
T Consensus 166 l~-~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 166 FK-KFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp HH-HHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred HH-HHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 99 99999999991 11100 0 0 0111 122357788999999999999999999887654
No 42
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.84 E-value=5.3e-09 Score=75.85 Aligned_cols=113 Identities=11% Similarity=0.156 Sum_probs=82.6
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
.+++++ ..+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|.+++++...+|+ ++++
T Consensus 96 ~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~ 173 (241)
T 2ex4_A 96 RLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLR-RCKG 173 (241)
T ss_dssp HTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHH-HHHH
Confidence 345555 568999998 778887775 23578877 444 333 399999999999999998899999 9999
Q ss_pred hCCCCCC------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 72 SIPSNDE------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 72 al~~~g~------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
.|+|||- .......++ ...+...++.++|.++|+++||+++++....
T Consensus 174 ~LkpgG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 174 SLRPNGIIVIKDNMAQEGVILD----DVDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp HEEEEEEEEEEEEEBSSSEEEE----TTTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred hcCCCeEEEEEEccCCCcceec----ccCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 9999981 111111111 1123445799999999999999999887653
No 43
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.83 E-value=1.4e-08 Score=73.02 Aligned_cols=114 Identities=9% Similarity=0.015 Sum_probs=79.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC--CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhh-hhC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG--TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCE-ESI 73 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~-~al 73 (132)
+..++++++ +++.+|+ |..++.+++ ..+++++. +.+..+ .+|++++.++||+++|. ..+|+ +++ +.|
T Consensus 57 ~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~~~~~~L 131 (250)
T 2p7i_A 57 TSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP--VALLK-RINDDWL 131 (250)
T ss_dssp HHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH--HHHHH-HHHHTTE
T ss_pred HHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH--HHHHH-HHHHHhc
Confidence 345666666 6888998 778888776 23898888 444333 39999999999999875 68999 999 999
Q ss_pred CCCC------CCCc-chhhhhh--hh-----------hhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 74 PSND------EGRK-TQLCFDL--LM-----------ATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 74 ~~~g------~~~~-~~~~~dl--~m-----------~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
+||| +... ....... .. ........+|.+++.++|+++||+++++..
T Consensus 132 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 132 AEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSG 198 (250)
T ss_dssp EEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEee
Confidence 9999 1111 1000000 00 011234568999999999999999988764
No 44
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.83 E-value=1.4e-08 Score=74.22 Aligned_cols=115 Identities=11% Similarity=0.161 Sum_probs=81.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++..+ +++.+|+ |..++.+++ .++++++. +.+ ++| .+|+++...++|.++|. ..+|+ ++
T Consensus 52 ~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~--~~~l~-~~ 126 (260)
T 1vl5_A 52 ANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNP--ASFVS-EA 126 (260)
T ss_dssp HHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCH--HHHHH-HH
T ss_pred HHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCH--HHHHH-HH
Confidence 345666665 8999998 778887765 25788887 444 555 39999999999999875 58999 99
Q ss_pred hhhCCCCC-----C--CCc---chhhhhhh-hhhc-CCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 70 EESIPSND-----E--GRK---TQLCFDLL-MATF-LNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 70 ~~al~~~g-----~--~~~---~~~~~dl~-m~~~-~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
++.|+||| . .+. ....++.. .+.. .....++.++|.++|+++||++..+...
T Consensus 127 ~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 127 YRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 99999999 1 111 11112211 1111 2345689999999999999998776543
No 45
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.82 E-value=3.6e-09 Score=77.04 Aligned_cols=116 Identities=18% Similarity=0.022 Sum_probs=81.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC---CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG---TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~---~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
+..+++..+. +++.+|+ |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|.++| ...+|+ ++++.
T Consensus 59 ~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~~~~ 134 (253)
T 3g5l_A 59 CIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIAS--FDDICK-KVYIN 134 (253)
T ss_dssp HHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSC--HHHHHH-HHHHH
T ss_pred HHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhh--HHHHHH-HHHHH
Confidence 3456666555 8999998 788888876 46899888 444 444 3999999999999966 578999 99999
Q ss_pred CCCCC------CCCc-------------ch--------hhhhhhh----hh--cCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 73 IPSND------EGRK-------------TQ--------LCFDLLM----AT--FLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 73 l~~~g------~~~~-------------~~--------~~~dl~m----~~--~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
|+||| +.+. .. ..++-.. +. ......+|.++|.++|++|||+++++.
T Consensus 135 LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 135 LKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp EEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeee
Confidence 99999 1000 00 0000000 00 011223599999999999999999987
Q ss_pred ec
Q 043665 120 PN 121 (132)
Q Consensus 120 ~~ 121 (132)
..
T Consensus 215 e~ 216 (253)
T 3g5l_A 215 EP 216 (253)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 46
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.81 E-value=2.9e-08 Score=72.21 Aligned_cols=114 Identities=6% Similarity=-0.083 Sum_probs=82.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++.+|. +++.+|+ |..++.+++ .+|++++. +.+ +++ .+|++++..++|.++ ...+|+ +
T Consensus 61 ~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~---~~~~l~-~ 135 (257)
T 3f4k_A 61 TLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNIG---FERGMN-E 135 (257)
T ss_dssp HHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCCC---HHHHHH-H
T ss_pred HHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhhcC---HHHHHH-H
Confidence 4678888886 9999999 778887765 46799988 544 444 399999999999994 467899 9
Q ss_pred hhhhCCCCC-----C-----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 69 CEESIPSND-----E-----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 69 ~~~al~~~g-----~-----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
+++.|+||| . ........+. +.......+|.++|.++++++||+++.+...+
T Consensus 136 ~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 136 WSKYLKKGGFIAVSEASWFTSERPAEIEDF--WMDAYPEISVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp HHTTEEEEEEEEEEEEEESSSCCCHHHHHH--HHHHCTTCCBHHHHHHHHHHTTEEEEEEEECC
T ss_pred HHHHcCCCcEEEEEEeeccCCCChHHHHHH--HHHhCCCCCCHHHHHHHHHHCCCeEEEEEECC
Confidence 999999999 1 1111111111 11112336799999999999999999887654
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.79 E-value=2.6e-08 Score=72.41 Aligned_cols=115 Identities=8% Similarity=-0.110 Sum_probs=81.3
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++.+ +.+++.+|+ |..++.+++ .++++++. +.+ +.+ .+|++++..++|.++| ...+|+ ++
T Consensus 51 ~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~~~~~~~--~~~~l~-~~ 126 (256)
T 1nkv_A 51 LCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGATWIAGG--FAGAEE-LL 126 (256)
T ss_dssp HHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESCGGGTSS--SHHHHH-HH
T ss_pred HHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCChHhcCC--HHHHHH-HH
Confidence 45677777 678999999 788888765 36899988 444 223 3999999999999986 578899 99
Q ss_pred hhhCCCCC-----C----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 70 EESIPSND-----E----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 70 ~~al~~~g-----~----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
++.|+||| + .......+.-..........+|.++|.++++++||+.+++..
T Consensus 127 ~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 127 AQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp TTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEEE
T ss_pred HHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEEe
Confidence 99999999 1 011001111001111123568999999999999999887654
No 48
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.79 E-value=1.2e-08 Score=73.66 Aligned_cols=105 Identities=13% Similarity=0.036 Sum_probs=79.6
Q ss_pred CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
++.+++.+|. |..++.+++ .++++++. +.+..| .+|+++...++|.+++++...+|+ ++++.|+|||
T Consensus 87 ~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG 165 (235)
T 3lcc_A 87 PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAK-SMYELLKPDG 165 (235)
T ss_dssp TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSCGGGHHHHHH-HHHHHEEEEE
T ss_pred CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcCCHHHHHHHHH-HHHHHCCCCc
Confidence 6778999998 778887775 24699988 555333 499999999999999888999999 9999999998
Q ss_pred C-----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 78 E-----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 78 ~-----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
- .+.... .......++.++|.++|+++||+++.+....
T Consensus 166 ~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 166 ELITLMYPITDH-------VGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp EEEEEECCCSCC-------CSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred EEEEEEeccccc-------CCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 1 110000 0001123789999999999999999887653
No 49
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.76 E-value=5.2e-08 Score=70.08 Aligned_cols=108 Identities=11% Similarity=0.138 Sum_probs=76.7
Q ss_pred CeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC-CceEEEehh-hhcCC-ChHHHHHHHHHHhhhhCCCCC--
Q 043665 12 IKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP-PANVVLLKW-ILHDW-SDEESLRYLKKKCEESIPSND-- 77 (132)
Q Consensus 12 l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P-~~D~~ll~~-vlh~~-~de~~~~iL~~~~~~al~~~g-- 77 (132)
.+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++.. ++|.+ +.++...+|+ ++++.|+|||
T Consensus 55 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~-~~~~~L~pgG~l 133 (243)
T 3d2l_A 55 YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYLQTEADVKQTFD-SAARLLTDGGKL 133 (243)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGCCSHHHHHHHHH-HHHHHEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhcCCHHHHHHHHH-HHHHhcCCCeEE
Confidence 68999999 788888775 35788887 544 444 499999986 88887 6678899999 9999999999
Q ss_pred ----CCCc--------c---------hh-------------hhhhhhhhcC-CC-----------ccCCHHHHHHHHHhC
Q 043665 78 ----EGRK--------T---------QL-------------CFDLLMATFL-NG-----------KEGSVYDWKKLFLAA 111 (132)
Q Consensus 78 ----~~~~--------~---------~~-------------~~dl~m~~~~-~g-----------~~rt~~e~~~ll~~a 111 (132)
+.+. . .. ..++.++... +| +.+|.+|++++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 213 (243)
T 3d2l_A 134 LFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREA 213 (243)
T ss_dssp EEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHT
T ss_pred EEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHC
Confidence 1100 0 00 0111111111 12 357999999999999
Q ss_pred CCeeeEEEe
Q 043665 112 GFSHYKITP 120 (132)
Q Consensus 112 Gf~~~~~~~ 120 (132)
||+++++..
T Consensus 214 Gf~~~~~~~ 222 (243)
T 3d2l_A 214 GFRVCAVTG 222 (243)
T ss_dssp TEEEEEEEE
T ss_pred CCeEEEEec
Confidence 999998864
No 50
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.76 E-value=3.1e-08 Score=74.66 Aligned_cols=114 Identities=4% Similarity=-0.122 Sum_probs=82.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++++ +.+++.+|+ |..++.+++ .++++++. +.+ +++ .+|+|+...++|.++ ...+|+ +
T Consensus 132 ~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~-~ 206 (312)
T 3vc1_A 132 MVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVD---LHDLFS-E 206 (312)
T ss_dssp HHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHH-H
T ss_pred HHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhCC---HHHHHH-H
Confidence 34566665 688999998 788887775 35899998 555 455 399999999999994 789999 9
Q ss_pred hhhhCCCCC-----C----C-C-cchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 69 CEESIPSND-----E----G-R-KTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 69 ~~~al~~~g-----~----~-~-~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+++.|+||| . . . ......+..... .....+|.++|.++++++||+++++...
T Consensus 207 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 207 HSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAH-FECNIHSRREYLRAMADNRLVPHTIVDL 269 (312)
T ss_dssp HHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHH-HTCCCCBHHHHHHHHHTTTEEEEEEEEC
T ss_pred HHHHcCCCcEEEEEEccccccccchhHHHHHHHhh-hcCCCCCHHHHHHHHHHCCCEEEEEEeC
Confidence 999999999 1 1 1 111111111100 1123688999999999999999888765
No 51
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.76 E-value=6.3e-08 Score=68.96 Aligned_cols=116 Identities=7% Similarity=-0.037 Sum_probs=82.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------C----CCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------T----NNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRY 64 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~----~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~i 64 (132)
+..+++++|..+++.+|. |..++.+++ . .+++++. +.. +.+ .+|++++..++|.+++++..++
T Consensus 44 ~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~ 123 (219)
T 3jwg_A 44 LSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAF 123 (219)
T ss_dssp HHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHH
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHH
Confidence 456777889899999998 778888765 1 2899888 432 332 4999999999999999999999
Q ss_pred HHHHhhhhCCCCC-----CCCcchhhh-hhh---hhhcCCCccCCHHHHH----HHHHhCCCeeeEE
Q 043665 65 LKKKCEESIPSND-----EGRKTQLCF-DLL---MATFLNGKEGSVYDWK----KLFLAAGFSHYKI 118 (132)
Q Consensus 65 L~~~~~~al~~~g-----~~~~~~~~~-dl~---m~~~~~g~~rt~~e~~----~ll~~aGf~~~~~ 118 (132)
|+ ++++.|+||| +.......+ .+. +.-.......|.++++ ++++++||++...
T Consensus 124 l~-~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 124 EK-VLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp HH-HHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HH-HHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence 99 9999999998 111111111 111 1111223446899999 8889999987554
No 52
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.74 E-value=1.7e-08 Score=71.59 Aligned_cols=110 Identities=10% Similarity=-0.103 Sum_probs=79.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
..++++ +.+++.+|. |..++.++..-++++.. +.+ +.+ .+|++++.+++|.+++++...+|+ ++++.|+|||
T Consensus 59 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG 135 (211)
T 3e23_A 59 EAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDELADVLK-LIWRALKPGG 135 (211)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHHHHHHHH-HHHHHEEEEE
T ss_pred HHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHHHHHHHHH-HHHHhcCCCc
Confidence 345544 568999998 77888777633566665 333 322 399999999999999999999999 9999999999
Q ss_pred C-------C-CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCC-CeeeEEEec
Q 043665 78 E-------G-RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAG-FSHYKITPN 121 (132)
Q Consensus 78 ~-------~-~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aG-f~~~~~~~~ 121 (132)
- . ........ ..-..++.++|.++++++| |+++++...
T Consensus 136 ~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 136 LFYASYKSGEGEGRDKLA------RYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEEECCSSCEECTTS------CEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred EEEEEEcCCCcccccccc------hhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 1 1 11110000 0113479999999999999 999887643
No 53
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.73 E-value=4.8e-08 Score=70.80 Aligned_cols=115 Identities=15% Similarity=0.217 Sum_probs=80.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++.++ +++.+|. |..++.+++ ..+++++. +.+ +++ .+|++++.+++|.|+| ...+|+ ++
T Consensus 36 ~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~ 110 (239)
T 1xxl_A 36 ALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSD--VRKAVR-EV 110 (239)
T ss_dssp HHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSC--HHHHHH-HH
T ss_pred HHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhccC--HHHHHH-HH
Confidence 345666665 8899998 778887765 26788887 433 444 3999999999999987 468899 99
Q ss_pred hhhCCCCC-----C--CCc---chhhhhhh-hhhc-CCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 70 EESIPSND-----E--GRK---TQLCFDLL-MATF-LNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 70 ~~al~~~g-----~--~~~---~~~~~dl~-m~~~-~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
++.|+||| . .+. ....+... .+.. .....++.++|.++|+++||+++++...
T Consensus 111 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 111 ARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 99999999 1 111 11111111 1111 2345689999999999999998876543
No 54
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.73 E-value=3e-08 Score=70.80 Aligned_cols=115 Identities=10% Similarity=-0.015 Sum_probs=78.8
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCCh-HHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSD-EESLRY 64 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~d-e~~~~i 64 (132)
..++++ +.+++.+|. |..++.++. .+++++.. +.+ +++ .+|++++..++|.+++ +....+
T Consensus 46 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~ 123 (235)
T 3sm3_A 46 LELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRI 123 (235)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHH
T ss_pred HHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHH
Confidence 445555 679999998 778887765 13678877 444 444 3999999999999975 557799
Q ss_pred HHHHhhhhCCCCCC-------CCc-c---hh--hhhhhhhhc---------------CCCccCCHHHHHHHHHhCCCeee
Q 043665 65 LKKKCEESIPSNDE-------GRK-T---QL--CFDLLMATF---------------LNGKEGSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 65 L~~~~~~al~~~g~-------~~~-~---~~--~~dl~m~~~---------------~~g~~rt~~e~~~ll~~aGf~~~ 116 (132)
|+ ++++.|+|||- ... . .. ..++..... .....+|.++|.++|+++||+++
T Consensus 124 l~-~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~ 202 (235)
T 3sm3_A 124 IK-EVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEID 202 (235)
T ss_dssp HH-HHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEE
T ss_pred HH-HHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEE
Confidence 99 99999999991 110 0 00 011100000 01246899999999999999998
Q ss_pred EEEe
Q 043665 117 KITP 120 (132)
Q Consensus 117 ~~~~ 120 (132)
++..
T Consensus 203 ~~~~ 206 (235)
T 3sm3_A 203 YFRV 206 (235)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8753
No 55
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.72 E-value=3.7e-08 Score=72.38 Aligned_cols=114 Identities=9% Similarity=-0.060 Sum_probs=82.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++. |..+++.+|+ |..++.+++ .++++++. +.+ +++ .+|++++..++|.++ ...+|+ +
T Consensus 61 ~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~---~~~~l~-~ 135 (267)
T 3kkz_A 61 TMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNIG---FERGLN-E 135 (267)
T ss_dssp HHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGTC---HHHHHH-H
T ss_pred HHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceecC---HHHHHH-H
Confidence 3455655 8899999999 778887765 37899988 544 444 399999999999993 367899 9
Q ss_pred hhhhCCCCC-----C----C-CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 69 CEESIPSND-----E----G-RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 69 ~~~al~~~g-----~----~-~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
+++.|+||| . . .......+.. .......+|.+++.++++++||+++++...+
T Consensus 136 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 136 WRKYLKKGGYLAVSECSWFTDERPAEINDFW--MDAYPEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp HGGGEEEEEEEEEEEEEESSSCCCHHHHHHH--HHHCTTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred HHHHcCCCCEEEEEEeeecCCCChHHHHHHH--HHhCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 999999999 1 1 1111111111 0112345789999999999999999887754
No 56
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.69 E-value=8.8e-08 Score=68.19 Aligned_cols=116 Identities=6% Similarity=-0.159 Sum_probs=81.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----C-------CCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----T-------NNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRY 64 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~-------~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~i 64 (132)
+..+++++|..+++.+|. |..++.+++ . .+++++. +.. +.+ .+|++++.+++|.+++++...+
T Consensus 44 ~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 123 (217)
T 3jwh_A 44 LKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAF 123 (217)
T ss_dssp HHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHH
T ss_pred HHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHH
Confidence 456777889899999998 778887765 1 2899887 322 332 4999999999999999999999
Q ss_pred HHHHhhhhCCCCC-----CCCcchhhh-hhh--hhh-cCCCccCCHHHHH----HHHHhCCCeeeEE
Q 043665 65 LKKKCEESIPSND-----EGRKTQLCF-DLL--MAT-FLNGKEGSVYDWK----KLFLAAGFSHYKI 118 (132)
Q Consensus 65 L~~~~~~al~~~g-----~~~~~~~~~-dl~--m~~-~~~g~~rt~~e~~----~ll~~aGf~~~~~ 118 (132)
|+ ++++.|+||| +.......+ .+. .+- ......+|.++++ ++++++||++...
T Consensus 124 l~-~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 124 ER-VLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HH-HHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HH-HHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEE
Confidence 99 9999999998 111111111 010 011 1223457999999 8999999987554
No 57
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.69 E-value=5.1e-08 Score=72.54 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=82.3
Q ss_pred HHHHHHHCCC-CeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPD-IKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~-l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..+++.+|+ .+++.+|+ |..++.+++ ..+++++. +.+ +.++ +|++++.+++|.++|. ..+|+ +++
T Consensus 37 ~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~~~ 113 (284)
T 3gu3_A 37 GLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFLLHMTTP--ETMLQ-KMI 113 (284)
T ss_dssp HHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCGGGCSSH--HHHHH-HHH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChhhcCCCH--HHHHH-HHH
Confidence 4678888995 89999998 777877765 33788887 544 3444 9999999999999875 58999 999
Q ss_pred hhCCCCC------CC-----C----------c---chhhhhhhh--hhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 71 ESIPSND------EG-----R----------K---TQLCFDLLM--ATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 71 ~al~~~g------~~-----~----------~---~~~~~dl~m--~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
+.|+||| +. . . ......+.. ....+....+..++.++|++|||+.+++..
T Consensus 114 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 114 HSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIECRV 189 (284)
T ss_dssp HTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEEEE
T ss_pred HHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEEEE
Confidence 9999999 11 0 0 000111111 111344456678999999999999887643
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.63 E-value=1.8e-07 Score=67.26 Aligned_cols=115 Identities=10% Similarity=0.019 Sum_probs=78.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC---CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG---TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESI 73 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~---~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al 73 (132)
..++++ +..+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|++++ ...+|+ ++++.|
T Consensus 59 ~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~~~~L 134 (243)
T 3bkw_A 59 RWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVED--VARLFR-TVHQAL 134 (243)
T ss_dssp HHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSC--HHHHHH-HHHHHE
T ss_pred HHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccch--HHHHHH-HHHHhc
Confidence 345554 2238999998 778888876 34788887 444 444 3999999999999976 568999 999999
Q ss_pred CCCC------CCCcc----hh--h--------hhhh-----------hhh-cCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 74 PSND------EGRKT----QL--C--------FDLL-----------MAT-FLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 74 ~~~g------~~~~~----~~--~--------~dl~-----------m~~-~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+||| +.+.. .. . +.+. .+. ......+|.++|.++|++|||+++++...
T Consensus 135 ~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 135 SPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp EEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 9999 11100 00 0 0000 000 01223379999999999999999887653
No 59
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.63 E-value=1.3e-08 Score=76.27 Aligned_cols=119 Identities=14% Similarity=0.101 Sum_probs=82.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCC---------------------------------------------------
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGT--------------------------------------------------- 29 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~--------------------------------------------------- 29 (132)
+..+++++|..+++.+|+ |..++.|++.
T Consensus 61 ~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~p 140 (292)
T 3g07_A 61 TLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAP 140 (292)
T ss_dssp HHHHHHHTCCSEEEEEESCHHHHHHHHHTC--------------------------------------------------
T ss_pred HHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccccchhhhccCccccc
Confidence 567889999999999999 7788877641
Q ss_pred -------------CCeEEEe--cccc-------CC-CceEEEehhhhcC----CChHHHHHHHHHHhhhhCCCCC-----
Q 043665 30 -------------NNLEFFL--EFEA-------IP-PANVVLLKWILHD----WSDEESLRYLKKKCEESIPSND----- 77 (132)
Q Consensus 30 -------------~ri~~~~--~~~~-------~P-~~D~~ll~~vlh~----~~de~~~~iL~~~~~~al~~~g----- 77 (132)
++|+|.. +.+. .+ .+|+|++..++|. |+++...++|+ ++++.|+|||
T Consensus 141 ~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~-~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 141 QVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR-RIYRHLRPGGILVLE 219 (292)
T ss_dssp -CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEE
T ss_pred cccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH-HHHHHhCCCcEEEEe
Confidence 5898888 5532 12 4999999999844 48889999999 9999999999
Q ss_pred CCCcch----hhhhhhhhhcCCCccCCHHHHHHHHHh--CCCeeeEEEec
Q 043665 78 EGRKTQ----LCFDLLMATFLNGKEGSVYDWKKLFLA--AGFSHYKITPN 121 (132)
Q Consensus 78 ~~~~~~----~~~dl~m~~~~~g~~rt~~e~~~ll~~--aGf~~~~~~~~ 121 (132)
+.+... ....-.+.........+.+++.++|.+ +||+.+++...
T Consensus 220 ~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 220 PQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp CCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred cCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 221110 000000111122333457899999999 99988776543
No 60
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.61 E-value=1.1e-07 Score=70.50 Aligned_cols=115 Identities=14% Similarity=0.036 Sum_probs=80.7
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-c-CC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-A-IP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~-~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
..+++. +.+++.+|+ |..++.+++ .++++++. +.+ + .+ .+|++++.+++|.++|. ..+|+ +
T Consensus 84 ~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~ 158 (285)
T 4htf_A 84 IKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADP--RSVLQ-T 158 (285)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCH--HHHHH-H
T ss_pred HHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCH--HHHHH-H
Confidence 345554 678999998 778888775 26899888 444 2 33 39999999999999875 67999 9
Q ss_pred hhhhCCCCCC------CCcc----h---hhhhhhhhh--------cCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 69 CEESIPSNDE------GRKT----Q---LCFDLLMAT--------FLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 69 ~~~al~~~g~------~~~~----~---~~~dl~m~~--------~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
+++.|+|||- .... . ..++...-. ......+|.+++.++|+++||+++++..+.
T Consensus 159 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 159 LWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred HHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence 9999999991 1000 0 001111100 012355789999999999999999887664
No 61
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.59 E-value=1.6e-07 Score=64.16 Aligned_cols=117 Identities=11% Similarity=0.025 Sum_probs=84.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe-ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL-EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~-~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~ 76 (132)
+..+++++. +++.+|. |..++.+++ .+++++.. - .+++ .+|++++.+++|.+++ ...+|+ ++++.|+||
T Consensus 32 ~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~~--~~~~l~-~~~~~L~pg 105 (170)
T 3i9f_A 32 CKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP-KEIPDNSVDFILFANSFHDMDD--KQHVIS-EVKRILKDD 105 (170)
T ss_dssp HHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG-GGSCTTCEEEEEEESCSTTCSC--HHHHHH-HHHHHEEEE
T ss_pred HHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC-CCCCCCceEEEEEccchhcccC--HHHHHH-HHHHhcCCC
Confidence 445666663 8999998 778888776 67888887 5 4444 4999999999999976 468999 999999999
Q ss_pred CC-----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEE
Q 043665 77 DE-----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAY 131 (132)
Q Consensus 77 g~-----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~ 131 (132)
|- .........- .....+|.++|+++++ ||+++++...+.....+.+.
T Consensus 106 G~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 106 GRVIIIDWRKENTGIGP-----PLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp EEEEEEEECSSCCSSSS-----CGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEE
T ss_pred CEEEEEEcCccccccCc-----hHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEe
Confidence 81 0000000000 0123379999999999 99999999888776666654
No 62
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.56 E-value=5.1e-07 Score=62.31 Aligned_cols=106 Identities=6% Similarity=-0.017 Sum_probs=80.1
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC--CceEEEeh-hhhcCCChHHHHHHHHHHhhhhCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP--PANVVLLK-WILHDWSDEESLRYLKKKCEESIP 74 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P--~~D~~ll~-~vlh~~~de~~~~iL~~~~~~al~ 74 (132)
..+++. +.+++.+|. |..++.++. ..+++++. +.+ +++ .+|++++. .++|.+++++...+|+ ++++.|+
T Consensus 62 ~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~-~~~~~l~ 138 (195)
T 3cgg_A 62 GYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALA-NIHRALG 138 (195)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHH-HHHHHEE
T ss_pred HHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHH-HHHHHhC
Confidence 344544 568999998 778888776 56788877 554 454 39999998 8999999998999999 9999999
Q ss_pred CCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 75 SNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 75 ~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
|||-. .+ ...+...++.+++.++++++||++.++...
T Consensus 139 ~~G~l-----~~-----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 139 ADGRA-----VI-----GFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp EEEEE-----EE-----EEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred CCCEE-----EE-----EeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 98720 00 011233478999999999999999887543
No 63
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.55 E-value=5.1e-07 Score=66.24 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=78.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~ 76 (132)
..+++ |+.+++.+|+ |..++.++...+++++. +.+ +++ .+|++++.+++|.++| ...+|+ ++++.|+ |
T Consensus 50 ~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~~~~Lk-g 123 (261)
T 3ege_A 50 VALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSH--LEKSFQ-EMQRIIR-D 123 (261)
T ss_dssp HHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSS--HHHHHH-HHHHHBC-S
T ss_pred HHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccC--HHHHHH-HHHHHhC-C
Confidence 34444 7889999999 77888777756899988 444 454 3999999999999966 568999 9999999 9
Q ss_pred CC------CC-cch-hhh-hhhh--hhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 77 DE------GR-KTQ-LCF-DLLM--ATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 77 g~------~~-~~~-~~~-dl~m--~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
|- .+ ... ... .+.- ........++.+++. +|++|||+.+++...
T Consensus 124 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 124 GTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp SCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred cEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 81 11 100 010 1111 111224456778899 999999998887654
No 64
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.54 E-value=2.6e-07 Score=67.07 Aligned_cols=112 Identities=7% Similarity=-0.127 Sum_probs=79.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhCCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~ 75 (132)
+..+++.+|+.+++.+|+ |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|.++| ...+|+ ++++.|+|
T Consensus 48 ~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~~~~L~p 124 (259)
T 2p35_A 48 TELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAVFQWVPD--HLAVLS-QLMDQLES 124 (259)
T ss_dssp HHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESCGGGSTT--HHHHHH-HHGGGEEE
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCchhhCCC--HHHHHH-HHHHhcCC
Confidence 456788889999999999 778888876 67888887 443 312 3999999999999976 568999 99999999
Q ss_pred CC------CCC--c--chhhhhhh---hhhc-------CCCccCCHHHHHHHHHhCCCeee
Q 043665 76 ND------EGR--K--TQLCFDLL---MATF-------LNGKEGSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 76 ~g------~~~--~--~~~~~dl~---m~~~-------~~g~~rt~~e~~~ll~~aGf~~~ 116 (132)
|| +.. . ......+. .+.. .....++.++|.++|+++||++.
T Consensus 125 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 125 GGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp EEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEE
T ss_pred CeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceE
Confidence 99 111 0 00111110 0100 12345899999999999999753
No 65
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=1.9e-07 Score=68.96 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=78.6
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~ 76 (132)
..+++ |+.+++.+|+ |..++.+++ ..+++++. +.+ +.+ .+|++++.+++|.++|. ..+|+ ++++.|+||
T Consensus 73 ~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~d~--~~~l~-~~~~~Lkpg 147 (279)
T 3ccf_A 73 EKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAMLHWVKEP--EAAIA-SIHQALKSG 147 (279)
T ss_dssp HHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESCGGGCSCH--HHHHH-HHHHHEEEE
T ss_pred HHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcchhhhCcCH--HHHHH-HHHHhcCCC
Confidence 34555 8889999998 778888776 56788887 443 334 39999999999999874 58899 999999999
Q ss_pred C------CCC-cchhhhhhhhhh----------c-CCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 77 D------EGR-KTQLCFDLLMAT----------F-LNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 77 g------~~~-~~~~~~dl~m~~----------~-~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
| +.. ......+...-. . .....++.++|.++|+++||+++++..
T Consensus 148 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 209 (279)
T 3ccf_A 148 GRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAAL 209 (279)
T ss_dssp EEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEE
T ss_pred cEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEE
Confidence 9 111 111111111000 0 012356899999999999999887654
No 66
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.49 E-value=3.4e-07 Score=66.21 Aligned_cols=114 Identities=13% Similarity=0.068 Sum_probs=80.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC---CCCeEEEe--ccc-cCC-------CceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG---TNNLEFFL--EFE-AIP-------PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~---~~ri~~~~--~~~-~~P-------~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++..+ +++.+|. |.+++.+++ ..+++++. +.+ +.+ .+|++++..++|.+++++...+|+
T Consensus 71 ~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~- 147 (245)
T 3ggd_A 71 TKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQ- 147 (245)
T ss_dssp HHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHH-
T ss_pred HHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHH-
Confidence 456778887 7899998 778888876 45899887 554 211 289999999999999988999999
Q ss_pred HhhhhCCCCC-----C--CCcchh-----------hhhhhhhh--cCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 68 KCEESIPSND-----E--GRKTQL-----------CFDLLMAT--FLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 68 ~~~~al~~~g-----~--~~~~~~-----------~~dl~m~~--~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
++++.|+||| + ...... ...+.-.. ......++.+++.++| +||+++....
T Consensus 148 ~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 148 SLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TTEEEEEEEC
T ss_pred HHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CCCEEEeccc
Confidence 9999999999 1 111000 00011010 1122347999999999 9999877543
No 67
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.49 E-value=1.6e-07 Score=66.57 Aligned_cols=112 Identities=13% Similarity=0.034 Sum_probs=75.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe--ccc----c-CC-C-ceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFE----A-IP-P-ANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~----~-~P-~-~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
..+++. +.+++.+|. |..++.+++..++++.. +.+ + .+ + +|++++.+++| +.+ ...+|+ ++++.
T Consensus 68 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~--~~~~l~-~~~~~ 141 (227)
T 3e8s_A 68 RALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQD--IIELLS-AMRTL 141 (227)
T ss_dssp HHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC--CHHHHH-HHHHT
T ss_pred HHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-hhh--HHHHHH-HHHHH
Confidence 344544 668999998 77888888766776666 222 2 22 3 99999999999 554 468999 99999
Q ss_pred CCCCC------CCCc--c-h----hhhhhhhhhc------CCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 73 IPSND------EGRK--T-Q----LCFDLLMATF------LNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 73 l~~~g------~~~~--~-~----~~~dl~m~~~------~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
|+||| +.+. . . .......... .....+|.++|.++|+++||+++++..
T Consensus 142 L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 142 LVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp EEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred hCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 99999 1110 0 0 0000000000 112347999999999999999998764
No 68
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.45 E-value=5.5e-07 Score=67.14 Aligned_cols=113 Identities=11% Similarity=-0.010 Sum_probs=74.2
Q ss_pred HHHHHHCCCCeE--EEeec-hhHHhhhcC-------CCCeEEE--e-cccc--------CC--CceEEEehhhhcCCChH
Q 043665 3 RAIATAFPDIKC--IVLIC-LLWWIIWWG-------TNNLEFF--L-EFEA--------IP--PANVVLLKWILHDWSDE 59 (132)
Q Consensus 3 ~~l~~~~P~l~~--~v~Dl-p~v~~~a~~-------~~ri~~~--~-~~~~--------~P--~~D~~ll~~vlh~~~de 59 (132)
..++.++|+.++ +.+|. +.+++.+++ ..++++. . -.++ .+ .+|+|++.++||.++|-
T Consensus 72 ~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~ 151 (292)
T 2aot_A 72 SKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI 151 (292)
T ss_dssp HHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCH
T ss_pred HHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCH
Confidence 355677899864 99998 677877664 1355543 2 1111 22 39999999999999884
Q ss_pred HHHHHHHHHhhhhCCCCCC------CCc--chhhhhhhhhhcC---CCccCCHHHHHHHHHhCCCeeeEE
Q 043665 60 ESLRYLKKKCEESIPSNDE------GRK--TQLCFDLLMATFL---NGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 60 ~~~~iL~~~~~~al~~~g~------~~~--~~~~~dl~m~~~~---~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
...|+ ++++.|+|||- ... ....+.-..-... ....++.++|.++|+++||++...
T Consensus 152 --~~~l~-~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 152 --PATLK-FFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp --HHHHH-HHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred --HHHHH-HHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHCCCceEEE
Confidence 57899 99999999991 111 1111111000011 124578999999999999998764
No 69
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.41 E-value=1.2e-06 Score=64.58 Aligned_cols=117 Identities=7% Similarity=-0.123 Sum_probs=81.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cC-C--CceEEEehhhhcC--CChHHHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AI-P--PANVVLLKWILHD--WSDEESLRYLK 66 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~-P--~~D~~ll~~vlh~--~~de~~~~iL~ 66 (132)
..+++ .+..+++.+|. |..++.+++ ..+++++. +.+ ++ + .+|++++..++|. .+.++...+|+
T Consensus 80 ~~l~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~ 158 (298)
T 1ri5_A 80 LKYER-AGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQR 158 (298)
T ss_dssp HHHHH-HTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHH
T ss_pred HHHHH-CCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHH
Confidence 34444 46679999998 778887765 24788887 554 44 3 3999999999998 67888899999
Q ss_pred HHhhhhCCCCC------CCCc-c--------------hhhhh----hh----------hhhc---CCCccCCHHHHHHHH
Q 043665 67 KKCEESIPSND------EGRK-T--------------QLCFD----LL----------MATF---LNGKEGSVYDWKKLF 108 (132)
Q Consensus 67 ~~~~~al~~~g------~~~~-~--------------~~~~d----l~----------m~~~---~~g~~rt~~e~~~ll 108 (132)
++++.|+||| +... . ...++ +. +.-. .....+|.++|++++
T Consensus 159 -~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll 237 (298)
T 1ri5_A 159 -NIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGF 237 (298)
T ss_dssp -HHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHH
T ss_pred -HHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHH
Confidence 9999999999 1100 0 00000 00 0000 012456899999999
Q ss_pred HhCCCeeeEEEec
Q 043665 109 LAAGFSHYKITPN 121 (132)
Q Consensus 109 ~~aGf~~~~~~~~ 121 (132)
+++||+++++...
T Consensus 238 ~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 238 KRLGLSLVERKGF 250 (298)
T ss_dssp HTTTEEEEEEEEH
T ss_pred HHcCCEEEEecCH
Confidence 9999999988764
No 70
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.36 E-value=2e-06 Score=61.31 Aligned_cols=103 Identities=15% Similarity=0.037 Sum_probs=71.0
Q ss_pred EEeec-hhHHhhhcCCCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC------CCC--
Q 043665 15 IVLIC-LLWWIIWWGTNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND------EGR-- 80 (132)
Q Consensus 15 ~v~Dl-p~v~~~a~~~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g------~~~-- 80 (132)
+.+|. |..++.+++. +++++. +.+ +.+ .+|++++.+++|.+++. ..+|+ ++++.|+||| ...
T Consensus 69 ~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~~~~~L~pgG~l~i~~~~~~~ 144 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP--ERALK-EAYRILKKGGYLIVGIVDRES 144 (219)
T ss_dssp EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH--HHHHH-HHHHHEEEEEEEEEEEECSSS
T ss_pred hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH--HHHHH-HHHHHcCCCcEEEEEEeCCcc
Confidence 77787 6677777665 777777 433 444 39999999999999764 68999 9999999999 111
Q ss_pred cchhhhhhh-hh--hcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 81 KTQLCFDLL-MA--TFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 81 ~~~~~~dl~-m~--~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.....+... .. .......+|.++|.++|+++||+++++...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 145 FLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 111111110 00 012345589999999999999999887643
No 71
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.36 E-value=2.8e-06 Score=60.07 Aligned_cols=113 Identities=15% Similarity=0.020 Sum_probs=75.7
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe--ccc---cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFE---AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIP 74 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~---~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~ 74 (132)
..+++. + .+++.+|. |..++.+++.. .++.. +.+ +++ .+|++++.+++|.+++. ..+|+ ++++.|+
T Consensus 48 ~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~-~~~~~L~ 121 (230)
T 3cc8_A 48 AAIKEN-G-TRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP--WAVIE-KVKPYIK 121 (230)
T ss_dssp HHHHTT-T-CEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH--HHHHH-HTGGGEE
T ss_pred HHHHhc-C-CeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH--HHHHH-HHHHHcC
Confidence 345555 4 88999998 77777777632 24444 432 344 39999999999999875 58999 9999999
Q ss_pred CCC------CCC-cchhhhhhhh----------hhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 75 SND------EGR-KTQLCFDLLM----------ATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 75 ~~g------~~~-~~~~~~dl~m----------~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
||| +.. .......+.. ........+|.++|.++++++||+++++...
T Consensus 122 ~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 122 QNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp EEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 999 111 1111111100 0001224579999999999999999887654
No 72
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.32 E-value=1.4e-06 Score=65.56 Aligned_cols=108 Identities=13% Similarity=0.171 Sum_probs=76.5
Q ss_pred HHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--cccc---C--C----Cce-----EEEehhhhcCCChHH-HH
Q 043665 7 TAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEA---I--P----PAN-----VVLLKWILHDWSDEE-SL 62 (132)
Q Consensus 7 ~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~---~--P----~~D-----~~ll~~vlh~~~de~-~~ 62 (132)
+.+|+.+++.+|. |.+++.+++ .++++|+. +.++ + | .+| ++++..+||..+|++ ..
T Consensus 101 ~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~ 180 (277)
T 3giw_A 101 SVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAV 180 (277)
T ss_dssp HHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHH
T ss_pred HHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHH
Confidence 4689999999999 999999886 24799988 5542 0 1 134 688899999999987 58
Q ss_pred HHHHHHhhhhCCCCC---------CC-Ccc-hhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeE
Q 043665 63 RYLKKKCEESIPSND---------EG-RKT-QLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 63 ~iL~~~~~~al~~~g---------~~-~~~-~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
.+|+ +++++|+||| +. ++. ....+..-........||.+|+..+|. ||++++
T Consensus 181 ~~l~-~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 181 GIVR-RLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHH-HHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred HHHH-HHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC--CCcccC
Confidence 9999 9999999999 11 111 111221111112345699999999995 999654
No 73
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.31 E-value=1.5e-06 Score=61.65 Aligned_cols=114 Identities=9% Similarity=0.006 Sum_probs=78.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------------------CCCeEEEe--ccc-cCC---CceEEEehhhhcCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------------------TNNLEFFL--EFE-AIP---PANVVLLKWILHDWS 57 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------------------~~ri~~~~--~~~-~~P---~~D~~ll~~vlh~~~ 57 (132)
..|+++ +.+++.+|+ |.+++.+++ ..+++++. +++ +.+ .+|+++.+.++|.++
T Consensus 38 ~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~ 115 (203)
T 1pjz_A 38 SWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALP 115 (203)
T ss_dssp HHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSC
T ss_pred HHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcchhhCC
Confidence 456665 568999998 778887764 14788877 655 332 499999999999999
Q ss_pred hHHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 58 DEESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 58 de~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+++...+++ ++++.|+|||-.--....++-. .........|.+|+.+++++ ||++..+...
T Consensus 116 ~~~~~~~l~-~~~r~LkpgG~~~l~~~~~~~~-~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 116 ADMRERYVQ-HLEALMPQACSGLLITLEYDQA-LLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp HHHHHHHHH-HHHHHSCSEEEEEEEEESSCSS-SSSSCCCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred HHHHHHHHH-HHHHHcCCCcEEEEEEEecCcc-ccCCCCCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 988889999 9999999998200000000000 00011123689999999999 9998877654
No 74
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.30 E-value=3e-06 Score=62.03 Aligned_cols=117 Identities=9% Similarity=-0.019 Sum_probs=79.0
Q ss_pred HHHHHHHC-CCCeEEEeechh-------HHhhhcC-------CCCeEEEe-c-c-c---cCC--CceEEEehhhhcCCCh
Q 043665 2 ARAIATAF-PDIKCIVLICLL-------WWIIWWG-------TNNLEFFL-E-F-E---AIP--PANVVLLKWILHDWSD 58 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dlp~-------v~~~a~~-------~~ri~~~~-~-~-~---~~P--~~D~~ll~~vlh~~~d 58 (132)
+..+++++ |+.+++.+|+.. .++.+++ .++++++. - + . +++ .+|++++.+++|.+++
T Consensus 58 ~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~ 137 (275)
T 3bkx_A 58 SAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS 137 (275)
T ss_dssp HHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC
T ss_pred HHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCC
Confidence 45677775 889999999944 6777664 26888887 3 2 2 233 3999999999999988
Q ss_pred HHHHHHHHHHhhhhCCCCC-----C--C--Ccc---hhhhhhhh----hhc----CC--CccCCHHHHHHHHHhCCCeee
Q 043665 59 EESLRYLKKKCEESIPSND-----E--G--RKT---QLCFDLLM----ATF----LN--GKEGSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 59 e~~~~iL~~~~~~al~~~g-----~--~--~~~---~~~~dl~m----~~~----~~--g~~rt~~e~~~ll~~aGf~~~ 116 (132)
... +++ .++..++||| + . ... ...+.... ... .. ...+|.+++.++++++||+++
T Consensus 138 ~~~--~~~-~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~ 214 (275)
T 3bkx_A 138 ANA--LAL-LFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYT 214 (275)
T ss_dssp HHH--HHH-HHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEE
T ss_pred HHH--HHH-HHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeE
Confidence 754 777 7777888888 1 1 111 11111110 000 11 135899999999999999998
Q ss_pred EEEec
Q 043665 117 KITPN 121 (132)
Q Consensus 117 ~~~~~ 121 (132)
++...
T Consensus 215 ~~~~~ 219 (275)
T 3bkx_A 215 AGTIV 219 (275)
T ss_dssp ECCCB
T ss_pred EEEEe
Confidence 87665
No 75
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.28 E-value=4.1e-06 Score=58.15 Aligned_cols=108 Identities=6% Similarity=-0.110 Sum_probs=77.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
..+++. +.+++.+|. |..++.+++ ..+++++. +.+ +.+ .+|++++..++|.+++++...+|+ ++++
T Consensus 48 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~-~~~~ 124 (199)
T 2xvm_A 48 LYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIA-NMQR 124 (199)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGGSCGGGHHHHHH-HHHH
T ss_pred HHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhhCCHHHHHHHHH-HHHH
Confidence 345554 668999998 778887765 24788887 444 334 399999999999999888999999 9999
Q ss_pred hCCCCCC------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 72 SIPSNDE------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 72 al~~~g~------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
.|+|||- ......... ......++.++++++|++ |++++...
T Consensus 125 ~L~~gG~l~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~--f~~~~~~~ 172 (199)
T 2xvm_A 125 CTKPGGYNLIVAAMDTADYPCT-----VGFPFAFKEGELRRYYEG--WERVKYNE 172 (199)
T ss_dssp TEEEEEEEEEEEEBCCSSSCCC-----SCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred hcCCCeEEEEEEeeccCCcCCC-----CCCCCccCHHHHHHHhcC--CeEEEecc
Confidence 9999981 110000000 112335689999999987 99887653
No 76
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.24 E-value=3e-06 Score=61.45 Aligned_cols=113 Identities=10% Similarity=-0.062 Sum_probs=72.7
Q ss_pred HHHHCCCCeEEEeec-hhHHhhhcC---CC--------------------------------Ce-EEEe--ccc--c-CC
Q 043665 5 IATAFPDIKCIVLIC-LLWWIIWWG---TN--------------------------------NL-EFFL--EFE--A-IP 42 (132)
Q Consensus 5 l~~~~P~l~~~v~Dl-p~v~~~a~~---~~--------------------------------ri-~~~~--~~~--~-~P 42 (132)
+++..+ .+++.+|. |..++.+++ .. ++ ++.. +.+ + .+
T Consensus 74 l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~ 152 (265)
T 2i62_A 74 SACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGG 152 (265)
T ss_dssp TGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTT
T ss_pred Hhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCc
Confidence 344444 57899998 667777754 11 27 7776 444 2 12
Q ss_pred ----CceEEEehhhhcCCCh--HHHHHHHHHHhhhhCCCCCC-----CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhC
Q 043665 43 ----PANVVLLKWILHDWSD--EESLRYLKKKCEESIPSNDE-----GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAA 111 (132)
Q Consensus 43 ----~~D~~ll~~vlh~~~d--e~~~~iL~~~~~~al~~~g~-----~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~a 111 (132)
.+|++++..+||..++ ++...+|+ ++++.|+|||- ..... .+... -........+.+++.++|+++
T Consensus 153 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~-~~~~~LkpgG~li~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~a 229 (265)
T 2i62_A 153 VSLPPADCLLSTLCLDAACPDLPAYRTALR-NLGSLLKPGGFLVMVDALKSS-YYMIG-EQKFSSLPLGWETVRDAVEEA 229 (265)
T ss_dssp CCCCCEEEEEEESCHHHHCSSHHHHHHHHH-HHHTTEEEEEEEEEEEESSCC-EEEET-TEEEECCCCCHHHHHHHHHHT
T ss_pred cccCCccEEEEhhhhhhhcCChHHHHHHHH-HHHhhCCCCcEEEEEecCCCc-eEEcC-CccccccccCHHHHHHHHHHC
Confidence 3999999999994432 35789999 99999999981 00000 00000 000112346889999999999
Q ss_pred CCeeeEEEec
Q 043665 112 GFSHYKITPN 121 (132)
Q Consensus 112 Gf~~~~~~~~ 121 (132)
||+++++...
T Consensus 230 Gf~~~~~~~~ 239 (265)
T 2i62_A 230 GYTIEQFEVI 239 (265)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999887654
No 77
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.23 E-value=5.5e-06 Score=64.56 Aligned_cols=113 Identities=15% Similarity=0.001 Sum_probs=77.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe-ccc-------cCC--CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL-EFE-------AIP--PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~-~~~-------~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..++++ +.+++.+|. +..++.+++. .+.... +|. +.+ .+|++++.++||+++| ...+|+ +++
T Consensus 122 ~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d--~~~~l~-~~~ 195 (416)
T 4e2x_A 122 LRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPY--VQSVLE-GVD 195 (416)
T ss_dssp HHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTT--HHHHHH-HHH
T ss_pred HHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCCCEEEEEECChHHhcCC--HHHHHH-HHH
Confidence 3455554 458999998 6678877764 333333 332 122 4999999999999985 678999 999
Q ss_pred hhCCCCC----CCCcch-----hhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 71 ESIPSND----EGRKTQ-----LCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 71 ~al~~~g----~~~~~~-----~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
+.|+||| ..+... ..++- ........+|.++|.++++++||+++++...+
T Consensus 196 r~LkpgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 196 ALLAPDGVFVFEDPYLGDIVAKTSFDQ--IFDEHFFLFSATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHEEEEEEEEEEEECHHHHHHHTCGGG--CSTTCCEECCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHcCCCeEEEEEeCChHHhhhhcchhh--hhhhhhhcCCHHHHHHHHHHcCCEEEEEEEcc
Confidence 9999999 111111 11111 11134456899999999999999999887654
No 78
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.23 E-value=4.9e-06 Score=60.27 Aligned_cols=112 Identities=9% Similarity=0.047 Sum_probs=76.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..+++. +.+++.+|. |..++.+++ ..+++++. +.+ +++ .+|++++.+++|.++| ...+|+ +++
T Consensus 54 ~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~~ 128 (263)
T 2yqz_A 54 ALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPD--WPKVLA-EAI 128 (263)
T ss_dssp HHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTT--HHHHHH-HHH
T ss_pred HHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhcCC--HHHHHH-HHH
Confidence 3445554 568999998 777777764 46899888 443 444 3999999999999986 468999 999
Q ss_pred hhCCCCCC------CC---c---chh-hhhhhhhhcC----CCccCCHHHHHHHHHhCCCeeeEE
Q 043665 71 ESIPSNDE------GR---K---TQL-CFDLLMATFL----NGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 71 ~al~~~g~------~~---~---~~~-~~dl~m~~~~----~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
+.|+|||- .+ . ... ...+.-.... ....++.+++.++|+++||++..+
T Consensus 129 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 129 RVLKPGGALLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp HHEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHCCCCcEEEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 99999991 11 1 000 1111100000 123578899999999999997664
No 79
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.21 E-value=1.9e-06 Score=64.62 Aligned_cols=74 Identities=12% Similarity=0.071 Sum_probs=60.3
Q ss_pred HHHHHHCC----CCeEEEeec-hhHHhhhcCC-------------------------------------CCeEEEe--cc
Q 043665 3 RAIATAFP----DIKCIVLIC-LLWWIIWWGT-------------------------------------NNLEFFL--EF 38 (132)
Q Consensus 3 ~~l~~~~P----~l~~~v~Dl-p~v~~~a~~~-------------------------------------~ri~~~~--~~ 38 (132)
+.|++.+| +.+++..|+ +.+++.|++. ++|+|.. ++
T Consensus 125 i~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~ 204 (274)
T 1af7_A 125 ITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLL 204 (274)
T ss_dssp HHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTT
T ss_pred HHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccC
Confidence 44566655 578999999 7788887641 2588887 66
Q ss_pred c-cCC---CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 39 E-AIP---PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 39 ~-~~P---~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
+ ++| .+|+|+++++|++++++...++++ +++++|+|||
T Consensus 205 ~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~-~~~~~L~pgG 246 (274)
T 1af7_A 205 EKQYNVPGPFDAIFCRNVMIYFDKTTQEDILR-RFVPLLKPDG 246 (274)
T ss_dssp CSSCCCCCCEEEEEECSSGGGSCHHHHHHHHH-HHGGGEEEEE
T ss_pred CCCCCcCCCeeEEEECCchHhCCHHHHHHHHH-HHHHHhCCCc
Confidence 6 454 499999999999999999999999 9999999999
No 80
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.17 E-value=2e-05 Score=58.17 Aligned_cols=116 Identities=11% Similarity=0.005 Sum_probs=82.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC--CceEEEeh-------------hhhcCCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP--PANVVLLK-------------WILHDWS 57 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P--~~D~~ll~-------------~vlh~~~ 57 (132)
+..+++.+|+.+++.+|. |..++.++. .++++++. ++++.+ .+|+++.. .+++..+
T Consensus 124 ~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p 203 (276)
T 2b3t_A 124 ALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEP 203 (276)
T ss_dssp HHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSC
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCCCccccccChhhhhcCc
Confidence 457888899999999998 778887765 25799888 766553 49999987 3444433
Q ss_pred h----------HHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe-cCCcce
Q 043665 58 D----------EESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP-NLGLWS 126 (132)
Q Consensus 58 d----------e~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~-~~~~~~ 126 (132)
+ +....+++ ++.+.|+|||-. .+. ....+.+++.++++++||+.+++.. ..|...
T Consensus 204 ~~al~~~~~g~~~~~~~l~-~~~~~LkpgG~l-----~~~--------~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r 269 (276)
T 2b3t_A 204 LTALVAADSGMADIVHIIE-QSRNALVSGGFL-----LLE--------HGWQQGEAVRQAFILAGYHDVETCRDYGDNER 269 (276)
T ss_dssp STTTBCHHHHTHHHHHHHH-HHGGGEEEEEEE-----EEE--------CCSSCHHHHHHHHHHTTCTTCCEEECTTSSEE
T ss_pred HHHHcCCCcHHHHHHHHHH-HHHHhcCCCCEE-----EEE--------ECchHHHHHHHHHHHCCCcEEEEEecCCCCCc
Confidence 2 45578999 999999998720 000 0124578999999999999777654 556666
Q ss_pred EEEEE
Q 043665 127 LIEAY 131 (132)
Q Consensus 127 ~ie~~ 131 (132)
++.++
T Consensus 270 ~~~~~ 274 (276)
T 2b3t_A 270 VTLGR 274 (276)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66554
No 81
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.16 E-value=6.8e-06 Score=57.78 Aligned_cols=109 Identities=5% Similarity=-0.091 Sum_probs=80.3
Q ss_pred HHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhCCC
Q 043665 6 ATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 6 ~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~ 75 (132)
+.++|..+++.+|. |..++.+++ ..++++.. +.+..+ .+|++++...+|. ...+++ ++++.|+|
T Consensus 78 l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~-----~~~~l~-~~~~~L~~ 151 (205)
T 3grz_A 78 AHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI-----LLDLIP-QLDSHLNE 151 (205)
T ss_dssp HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH-----HHHHGG-GSGGGEEE
T ss_pred HHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH-----HHHHHH-HHHHhcCC
Confidence 33578889999999 778887775 22388887 655444 4999999877754 478899 99999999
Q ss_pred CCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 76 NDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 76 ~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
||-. .+ ..-...+.+++.++++++||+..++...++..+++.-+|
T Consensus 152 gG~l-----~~-------~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 152 DGQV-----IF-------SGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEE-----EE-------EEEEGGGHHHHHHHHHHTTEEEEEEEEETTEEEEEEEEC
T ss_pred CCEE-----EE-------EecCcccHHHHHHHHHHcCCceEEeeccCCEEEEEEecc
Confidence 8720 00 000012578999999999999999988888888887654
No 82
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.16 E-value=4.7e-06 Score=61.60 Aligned_cols=73 Identities=7% Similarity=-0.098 Sum_probs=56.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc-c---CC--CceEEEeh-hhhcCCCh---
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE-A---IP--PANVVLLK-WILHDWSD--- 58 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~-~---~P--~~D~~ll~-~vlh~~~d--- 58 (132)
+..++++ +.+++.+|+ |..++.+++ ..++.+.. +.+ + .+ .+|+|++. +++|++++
T Consensus 72 ~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~ 149 (293)
T 3thr_A 72 SIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKG 149 (293)
T ss_dssp HHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSS
T ss_pred HHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCcccc
Confidence 3455665 348999998 678877753 24677766 444 3 34 49999998 99999988
Q ss_pred --HHHHHHHHHHhhhhCCCCC
Q 043665 59 --EESLRYLKKKCEESIPSND 77 (132)
Q Consensus 59 --e~~~~iL~~~~~~al~~~g 77 (132)
++...+|+ ++++.|+|||
T Consensus 150 ~~~~~~~~l~-~~~~~LkpgG 169 (293)
T 3thr_A 150 DQSEHRLALK-NIASMVRPGG 169 (293)
T ss_dssp SSHHHHHHHH-HHHHTEEEEE
T ss_pred CHHHHHHHHH-HHHHHcCCCe
Confidence 88999999 9999999999
No 83
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.14 E-value=1.9e-06 Score=60.44 Aligned_cols=108 Identities=6% Similarity=-0.134 Sum_probs=76.2
Q ss_pred CCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 9 FPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 9 ~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
.++.+++.+|. |..++.+++ ..+++++. +.+ +++ .+|++++.+++|+++.++...+|+ ++++.|+|||
T Consensus 44 ~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~-~~~~~LkpgG 122 (209)
T 2p8j_A 44 EDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAID-EIKRVLKPGG 122 (209)
T ss_dssp HTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHH-HHHHHEEEEE
T ss_pred hCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHH-HHHHHcCCCc
Confidence 36789999998 778887765 45788877 444 454 399999999999999888999999 9999999999
Q ss_pred C-------CC--cch--h-hhhhhh--hhc---CCCccCCHHHHHHHHHhCCCeeeE
Q 043665 78 E-------GR--KTQ--L-CFDLLM--ATF---LNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 78 ~-------~~--~~~--~-~~dl~m--~~~---~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
- .. ... . ..+... +.. ..+..+|.+|+.++|+++||....
T Consensus 123 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 123 LACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp EEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred EEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 1 00 000 0 000000 000 112467999999999999987654
No 84
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.13 E-value=2.6e-05 Score=56.26 Aligned_cols=72 Identities=14% Similarity=0.130 Sum_probs=56.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC-CceEEEeh-hhhcCCChHHHHHHHHHHhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP-PANVVLLK-WILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P-~~D~~ll~-~vlh~~~de~~~~iL~~~~~~ 71 (132)
..+++. +.+++.+|+ |..++.+++ ..+++++. +.+ +.+ .+|++++. ..+|.+++++...+|+ ++++
T Consensus 57 ~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~-~~~~ 133 (252)
T 1wzn_A 57 LELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFDEEDLRKLFS-KVAE 133 (252)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchhcCCHHHHHHHHH-HHHH
Confidence 345554 568999999 778887765 34788887 554 444 49999986 5677788888999999 9999
Q ss_pred hCCCCC
Q 043665 72 SIPSND 77 (132)
Q Consensus 72 al~~~g 77 (132)
.|+|||
T Consensus 134 ~L~pgG 139 (252)
T 1wzn_A 134 ALKPGG 139 (252)
T ss_dssp HEEEEE
T ss_pred HcCCCe
Confidence 999999
No 85
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.12 E-value=3.8e-06 Score=59.41 Aligned_cols=88 Identities=8% Similarity=0.086 Sum_probs=62.5
Q ss_pred CeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHH
Q 043665 31 NLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWK 105 (132)
Q Consensus 31 ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~ 105 (132)
++++.. +.+ +++ .+|++++.+++| +. +...+|+ ++++.|+|||-.- ..+ ......+.++|.
T Consensus 98 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~--~~~~~l~-~~~~~L~~gG~l~----i~~------~~~~~~~~~~~~ 163 (215)
T 2zfu_A 98 DPRVTVCDMAQVPLEDESVDVAVFCLSLM-GT--NIRDFLE-EANRVLKPGGLLK----VAE------VSSRFEDVRTFL 163 (215)
T ss_dssp STTEEESCTTSCSCCTTCEEEEEEESCCC-SS--CHHHHHH-HHHHHEEEEEEEE----EEE------CGGGCSCHHHHH
T ss_pred CceEEEeccccCCCCCCCEeEEEEehhcc-cc--CHHHHHH-HHHHhCCCCeEEE----EEE------cCCCCCCHHHHH
Confidence 555665 444 444 399999999998 43 3578999 9999999997200 000 011123899999
Q ss_pred HHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 106 KLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 106 ~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
++++++||+++.+...++...++++++
T Consensus 164 ~~l~~~Gf~~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 164 RAVTKLGFKIVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp HHHHHTTEEEEEEECCSTTCEEEEEEE
T ss_pred HHHHHCCCEEEEEecCCCeEEEEEEEe
Confidence 999999999988777666777777753
No 86
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.09 E-value=2.2e-05 Score=54.87 Aligned_cols=108 Identities=4% Similarity=-0.122 Sum_probs=72.5
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
.+++. +.+++.+|. |..++.+++ ..++++.. +.+ +++ .+|++++. ++.++.++...+|+ ++++.
T Consensus 46 ~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~~~~~~~l~-~~~~~ 120 (202)
T 2kw5_A 46 FLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHLPSSLRQQLYP-KVYQG 120 (202)
T ss_dssp HHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCCCHHHHHHHHH-HHHTT
T ss_pred HHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcCCHHHHHHHHH-HHHHh
Confidence 44443 568999998 778887765 34788887 544 444 39999984 34567788899999 99999
Q ss_pred CCCCCC------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 73 IPSNDE------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 73 l~~~g~------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
|+|||- .... ..+... ........+|.++++++|+ ||+++++..
T Consensus 121 L~pgG~l~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 121 LKPGGVFILEGFAPEQ-LQYNTG-GPKDLDLLPKLETLQSELP--SLNWLIANN 170 (202)
T ss_dssp CCSSEEEEEEEECTTT-GGGTSC-CSSSGGGCCCHHHHHHHCS--SSCEEEEEE
T ss_pred cCCCcEEEEEEecccc-ccCCCC-CCCcceeecCHHHHHHHhc--CceEEEEEE
Confidence 999991 1110 000000 0001134689999999999 999887643
No 87
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.99 E-value=1.4e-05 Score=54.87 Aligned_cols=86 Identities=7% Similarity=-0.127 Sum_probs=59.7
Q ss_pred hhHHhhhcC--CCCeEEEe--ccc-cC---C--CceEEEehhhhcCC-ChHHHHHHHHHHhhhhCCCCCC----CCcchh
Q 043665 20 LLWWIIWWG--TNNLEFFL--EFE-AI---P--PANVVLLKWILHDW-SDEESLRYLKKKCEESIPSNDE----GRKTQL 84 (132)
Q Consensus 20 p~v~~~a~~--~~ri~~~~--~~~-~~---P--~~D~~ll~~vlh~~-~de~~~~iL~~~~~~al~~~g~----~~~~~~ 84 (132)
+.+++.+++ ..++++.. +.+ +. + .+|+++..+++|.+ +|. ..+|+ ++++.|+|||- .+....
T Consensus 30 ~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~--~~~l~-~~~r~LkpgG~l~~~~~~~~~ 106 (176)
T 2ld4_A 30 KGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHS--AEILA-EIARILRPGGCLFLKEPVETA 106 (176)
T ss_dssp HHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCC--HHHHH-HHHHHEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCH--HHHHH-HHHHHCCCCEEEEEEcccccc
Confidence 566776665 34688776 433 33 4 39999999999998 553 78999 99999999982 110000
Q ss_pred hhhhhhhhcCCCccCCHHHHHHHHHhCCCeee
Q 043665 85 CFDLLMATFLNGKEGSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 85 ~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~ 116 (132)
. ......++.++|.++|+++|| +.
T Consensus 107 ~-------~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 107 V-------DNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp S-------CSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred c-------ccccccCCHHHHHHHHHHCCC-cE
Confidence 0 002334789999999999999 44
No 88
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.98 E-value=1.5e-05 Score=59.27 Aligned_cols=109 Identities=6% Similarity=-0.087 Sum_probs=75.2
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcC--------CCCeEEEe--ccc-cC--------CCceEEEehhhhcCCChHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWG--------TNNLEFFL--EFE-AI--------PPANVVLLKWILHDWSDEE 60 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~--------~~ri~~~~--~~~-~~--------P~~D~~ll~~vlh~~~de~ 60 (132)
+..+++++ |..+++.+|+ |..++.+++ ..+++++. +.+ +. ..+|++++..++|.+ +
T Consensus 51 ~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~ 127 (299)
T 3g5t_A 51 TLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF---D 127 (299)
T ss_dssp HHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS---C
T ss_pred HHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh---C
Confidence 45677776 9999999999 778888765 46899988 443 22 139999999999999 4
Q ss_pred HHHHHHHHhhhhCCCCCC----------C---Ccchhhhhhhhhh--cCCCcc--CCHHHHHHHHHhCCCe
Q 043665 61 SLRYLKKKCEESIPSNDE----------G---RKTQLCFDLLMAT--FLNGKE--GSVYDWKKLFLAAGFS 114 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g~----------~---~~~~~~~dl~m~~--~~~g~~--rt~~e~~~ll~~aGf~ 114 (132)
...+|+ ++++.|+|||- . +.....+.-.... ..+... ...+.+.++++++||.
T Consensus 128 ~~~~l~-~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gfp 197 (299)
T 3g5t_A 128 FEKFQR-SAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHLD 197 (299)
T ss_dssp HHHHHH-HHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCCC
T ss_pred HHHHHH-HHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhccCCC
Confidence 678999 99999999991 0 1111222211111 011222 4566789999999993
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.97 E-value=7.3e-05 Score=52.43 Aligned_cols=95 Identities=8% Similarity=0.056 Sum_probs=70.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccC---CCceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAI---PPANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~---P~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++.+|..+++.+|. |..++.+++ .++++++. +.+.. +.+|++++...++ ....+++ ++
T Consensus 55 ~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~-----~~~~~l~-~~ 128 (204)
T 3e05_A 55 SIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG-----MLEEIID-AV 128 (204)
T ss_dssp HHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT-----CHHHHHH-HH
T ss_pred HHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc-----CHHHHHH-HH
Confidence 567888999999999999 888888875 36898887 54533 4599999988776 3568999 99
Q ss_pred hhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCe
Q 043665 70 EESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFS 114 (132)
Q Consensus 70 ~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~ 114 (132)
.+.|+|||-. .+. .....+.+++.++++++||.
T Consensus 129 ~~~LkpgG~l-----~~~-------~~~~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 129 DRRLKSEGVI-----VLN-------AVTLDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp HHHCCTTCEE-----EEE-------ECBHHHHHHHHHHHHHTTCE
T ss_pred HHhcCCCeEE-----EEE-------ecccccHHHHHHHHHHCCCc
Confidence 9999999821 000 00012567899999999984
No 90
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.91 E-value=0.0001 Score=52.93 Aligned_cols=119 Identities=12% Similarity=0.015 Sum_probs=75.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-----cCC-CceEEEehhhhcCCChH-HHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-----AIP-PANVVLLKWILHDWSDE-ESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-----~~P-~~D~~ll~~vlh~~~de-~~~~iL~~ 67 (132)
+..+++.+|..+++.+|. |..++.+++ .+++.++. +.+ +.+ .+|+++ |++++. ....+|+
T Consensus 89 ~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~-----~~~~~~~~~~~~l~- 162 (230)
T 1fbn_A 89 PSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY-----EDVAQPNQAEILIK- 162 (230)
T ss_dssp HHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE-----ECCCSTTHHHHHHH-
T ss_pred HHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE-----EecCChhHHHHHHH-
Confidence 456788888889999998 667766543 46888876 433 223 489988 665543 4566799
Q ss_pred HhhhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCc---ceEEEEE
Q 043665 68 KCEESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGL---WSLIEAY 131 (132)
Q Consensus 68 ~~~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~---~~~ie~~ 131 (132)
++.+.|+|||-. .......+.. ........+++. +|+++||+..++.+.... +.++.++
T Consensus 163 ~~~~~LkpgG~l~i~~~~~~~~~~----~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 163 NAKWFLKKGGYGMIAIKARSIDVT----KDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp HHHHHEEEEEEEEEEEEGGGTCSS----SCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred HHHHhCCCCcEEEEEEecCCCCCC----CCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 999999999820 0000000000 000011236788 999999999988876543 6777665
No 91
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.86 E-value=6.6e-05 Score=55.22 Aligned_cols=111 Identities=12% Similarity=0.043 Sum_probs=76.6
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----------------------CCCeEEEe--ccc-cC---CCceEEEehhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----------------------TNNLEFFL--EFE-AI---PPANVVLLKWI 52 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----------------------~~ri~~~~--~~~-~~---P~~D~~ll~~v 52 (132)
..|++. +.+++.+|+ |..++.+++ ..+|+++. +++ +. ..+|+|+.+.+
T Consensus 84 ~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~ 161 (252)
T 2gb4_A 84 KWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGA 161 (252)
T ss_dssp HHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSS
T ss_pred HHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhh
Confidence 345554 568999998 778887743 15788887 665 33 24999999999
Q ss_pred hcCCChHHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCc--cCCHHHHHHHHHhCCCeeeEEEe
Q 043665 53 LHDWSDEESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGK--EGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 53 lh~~~de~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~--~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
||.+++++...+++ ++++.|+|||-.--....++. ...+|. ..|.+|+.++|++ +|++..+..
T Consensus 162 l~~l~~~~~~~~l~-~~~~~LkpGG~l~l~~~~~~~---~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 162 LVAINPGDHDRYAD-IILSLLRKEFQYLVAVLSYDP---TKHAGPPFYVPSAELKRLFGT-KCSMQCLEE 226 (252)
T ss_dssp TTTSCGGGHHHHHH-HHHHTEEEEEEEEEEEEECCT---TSCCCSSCCCCHHHHHHHHTT-TEEEEEEEE
T ss_pred hhhCCHHHHHHHHH-HHHHHcCCCeEEEEEEEecCC---ccCCCCCCCCCHHHHHHHhhC-CeEEEEEec
Confidence 99999888889999 999999999821000000000 001222 3689999999988 599876643
No 92
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.85 E-value=8.8e-06 Score=59.17 Aligned_cols=119 Identities=11% Similarity=-0.006 Sum_probs=72.3
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--c----cccCC-----CceEEEehhhhcCCCh----
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--E----FEAIP-----PANVVLLKWILHDWSD---- 58 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~----~~~~P-----~~D~~ll~~vlh~~~d---- 58 (132)
+..+++++|+.+++.+|+ |..++.++. .+|++++. . +++++ .+|++++.-..|...+
T Consensus 80 ~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~ 159 (254)
T 2h00_A 80 YPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKG 159 (254)
T ss_dssp HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC--------
T ss_pred HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcc
Confidence 456788889999999998 888888775 35799886 2 23444 3999999755554431
Q ss_pred ---------HHHHHHHHHHhhhhCCCCCCC-------Ccc-hhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 59 ---------EESLRYLKKKCEESIPSNDEG-------RKT-QLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 59 ---------e~~~~iL~~~~~~al~~~g~~-------~~~-~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
+....+++ .+++.|+|||.. ... .......++....|...+.+++.++++++||+.+++...
T Consensus 160 ~~~~~~~~~~~~~~l~~-~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 160 VNSRNPRRPPPSSVNTG-GITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp ------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccccccccCCHHHHhh-hHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 11235678 889999998820 000 000011111112355566789999999999998877654
No 93
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.83 E-value=6.2e-05 Score=56.73 Aligned_cols=108 Identities=6% Similarity=-0.034 Sum_probs=70.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---c-CC-CceEEEehhhhcCCChHHH--
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---A-IP-PANVVLLKWILHDWSDEES-- 61 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~-~P-~~D~~ll~~vlh~~~de~~-- 61 (132)
+..+++..|..+++++|+ |.+++.+++ .+|++++. .++ . .+ .+|+|++....+.++++..
T Consensus 110 ~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~ 189 (304)
T 3bwc_A 110 LREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFG 189 (304)
T ss_dssp HHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CC
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhH
Confidence 456676667889999999 788887764 36899887 433 2 13 4999999766666554433
Q ss_pred HHHHHHHhhhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 62 LRYLKKKCEESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
.++++ +++++|+|||-. ......+ ...+.+++.+.++++||..+++..
T Consensus 190 ~~~l~-~~~~~LkpgG~lv~~~~~~~~----------~~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 190 EAFYK-DVLRILKPDGICCNQGESIWL----------DLELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp HHHHH-HHHHHEEEEEEEEEEECCTTT----------CHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHH-HHHHhcCCCcEEEEecCCccc----------chHHHHHHHHHHHhCCCCcEEEEE
Confidence 68899 999999999810 0000000 123467899999999999887654
No 94
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.76 E-value=3.8e-05 Score=56.85 Aligned_cols=75 Identities=11% Similarity=0.061 Sum_probs=50.9
Q ss_pred ceEEEehhhhcCCChH--HHHHHHHHHhhhhCCCCCCC---Ccc-hhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeE
Q 043665 44 ANVVLLKWILHDWSDE--ESLRYLKKKCEESIPSNDEG---RKT-QLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 44 ~D~~ll~~vlh~~~de--~~~~iL~~~~~~al~~~g~~---~~~-~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
+|+|++..+||..+++ +-..+|+ ++++.|+|||-. ... ...+... -.......+|.++|.++|+++||++++
T Consensus 175 fD~V~~~~~l~~~~~~~~~~~~~l~-~~~r~LkpGG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 175 ADALVSAFCLEAVSPDLASFQRALD-HITTLLRPGGHLLLIGALEESWYLAG-EARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp EEEEEEESCHHHHCSSHHHHHHHHH-HHHTTEEEEEEEEEEEEESCCEEEET-TEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred CCEEEehhhhhhhcCCHHHHHHHHH-HHHHhcCCCCEEEEEEecCcceEEcC-CeeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 9999999999985543 6789999 999999999920 000 0000000 000012246899999999999999887
Q ss_pred EEe
Q 043665 118 ITP 120 (132)
Q Consensus 118 ~~~ 120 (132)
+..
T Consensus 253 ~~~ 255 (289)
T 2g72_A 253 LRT 255 (289)
T ss_dssp EEE
T ss_pred eeE
Confidence 654
No 95
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.72 E-value=0.0002 Score=55.36 Aligned_cols=105 Identities=12% Similarity=0.024 Sum_probs=74.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC-----CceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP-----PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P-----~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++..|+.+++.+|+ |.+++.+++ .+||+++. +++++| .+|+|++...+|.+. ...+|+
T Consensus 186 ~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~---~~~~l~- 261 (373)
T 2qm3_A 186 SIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEA---IRAFVG- 261 (373)
T ss_dssp HHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHH---HHHHHH-
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchHH---HHHHHH-
Confidence 456788889899999999 899998875 23899987 665443 399999987766542 488999
Q ss_pred HhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCH---HHHHHHHH-hCCCeeeEEEe
Q 043665 68 KCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSV---YDWKKLFL-AAGFSHYKITP 120 (132)
Q Consensus 68 ~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~---~e~~~ll~-~aGf~~~~~~~ 120 (132)
++.++|+|||-. ..++ +.....+. .+..+.++ +.||+...+.+
T Consensus 262 ~~~~~LkpgG~~----~~~~------~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 308 (373)
T 2qm3_A 262 RGIATLKGPRCA----GYFG------ITRRESSLDKWREIQKLLLNEFNVVITDIIR 308 (373)
T ss_dssp HHHHTBCSTTCE----EEEE------ECTTTCCHHHHHHHHHHHHHTSCCEEEEEEE
T ss_pred HHHHHcccCCeE----EEEE------EecCcCCHHHHHHHHHHHHHhcCcchhhhhh
Confidence 999999998621 0111 11123445 56677777 88998766654
No 96
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.61 E-value=0.00044 Score=59.18 Aligned_cols=114 Identities=5% Similarity=-0.135 Sum_probs=79.1
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcC------------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWG------------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESL 62 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~------------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~ 62 (132)
+..+++.. |..+++.+|+ |..++.|++ ..+|+++. +.+ +.+ .+|+|++..++|+++++...
T Consensus 736 ai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~ 815 (950)
T 3htx_A 736 LDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQAC 815 (950)
T ss_dssp HHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHH
T ss_pred HHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHH
Confidence 45667777 5679999998 778887754 24788888 444 333 49999999999999999999
Q ss_pred HHHHHHhhhhCCCCC-----CCCcchhhhhh---------------hhhhc-CCCccCCHHHHHH----HHHhCCCeee
Q 043665 63 RYLKKKCEESIPSND-----EGRKTQLCFDL---------------LMATF-LNGKEGSVYDWKK----LFLAAGFSHY 116 (132)
Q Consensus 63 ~iL~~~~~~al~~~g-----~~~~~~~~~dl---------------~m~~~-~~g~~rt~~e~~~----ll~~aGf~~~ 116 (132)
.+++ ++++.|+||. +.......+.. ..+-. ....+++.+|++. +.++.||.+.
T Consensus 816 ~~L~-eI~RvLKPG~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVe 893 (950)
T 3htx_A 816 EFGE-KVLSLFHPKLLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVE 893 (950)
T ss_dssp HHHH-HHHHTTCCSEEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHH-HHHHHcCCCEEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEEE
Confidence 9999 9999999985 11111111110 01111 2345688999988 5566698764
No 97
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.60 E-value=7.5e-05 Score=53.91 Aligned_cols=120 Identities=13% Similarity=0.022 Sum_probs=67.9
Q ss_pred HHHHHHHCCCCeEEEeech-h-HHhhh---cC------CCCeEEEe-ccccCCC--ceEEEehhhhcCCChHH------H
Q 043665 2 ARAIATAFPDIKCIVLICL-L-WWIIW---WG------TNNLEFFL-EFEAIPP--ANVVLLKWILHDWSDEE------S 61 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dlp-~-v~~~a---~~------~~ri~~~~-~~~~~P~--~D~~ll~~vlh~~~de~------~ 61 (132)
+..+++++|+.+++.+|+. . +++.| ++ ..+++++. -.+.+|. +|.+..-.+.+.|+... .
T Consensus 39 ~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~ 118 (225)
T 3p2e_A 39 IYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPN 118 (225)
T ss_dssp HHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTC
T ss_pred HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcch
Confidence 4567778999999999994 4 54544 43 34688877 3344452 35555444444454421 1
Q ss_pred HHHHHHHhhhhCCCCCC------CCcchhhhh--hhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 62 LRYLKKKCEESIPSNDE------GRKTQLCFD--LLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g~------~~~~~~~~d--l~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
..+|+ .+++.|+|||- ......... ..............+|+.++++++||++..+...+
T Consensus 119 ~~~l~-~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 119 RDILS-NVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHH-HHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHH-HHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeeeecC
Confidence 35799 99999999991 111000000 00000001011112359999999999998876543
No 98
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.60 E-value=6.8e-05 Score=52.83 Aligned_cols=72 Identities=6% Similarity=-0.047 Sum_probs=56.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccccCC--CceEEEehhhhcCCCh-HHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFEAIP--PANVVLLKWILHDWSD-EESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~d-e~~~~iL~~~~~~a 72 (132)
..+++.. .+++.+|. |..++.+++ .++++++. +.+..+ .+|++++.+++|.+++ +...++|+ ++++.
T Consensus 67 ~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~-~~~~~ 143 (216)
T 3ofk_A 67 EKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYLEDMTQMRTAID-NMVKM 143 (216)
T ss_dssp HHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGGSSSHHHHHHHHH-HHHHT
T ss_pred HHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHhCCCHHHHHHHHH-HHHHH
Confidence 3455553 47899998 778887775 45889888 544223 3999999999999986 66679999 99999
Q ss_pred CCCCC
Q 043665 73 IPSND 77 (132)
Q Consensus 73 l~~~g 77 (132)
|+|||
T Consensus 144 L~pgG 148 (216)
T 3ofk_A 144 LAPGG 148 (216)
T ss_dssp EEEEE
T ss_pred cCCCC
Confidence 99998
No 99
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.57 E-value=0.0001 Score=54.27 Aligned_cols=107 Identities=7% Similarity=-0.076 Sum_probs=75.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
..+++. +.+++.+|. |..++.++. .-++++.. +.+ +.+ .+|++++..++|.++++....+|+ ++++.
T Consensus 136 ~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~-~~~~~ 212 (286)
T 3m70_A 136 LYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLNRERVPSIIK-NMKEH 212 (286)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGSCGGGHHHHHH-HHHHT
T ss_pred HHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhCCHHHHHHHHH-HHHHh
Confidence 345554 568999998 778887765 23788887 554 334 399999999999999999999999 99999
Q ss_pred CCCCCC------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 73 IPSNDE------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 73 l~~~g~------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
|+|||- ........ ........+.+++.++++. |++....
T Consensus 213 LkpgG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 213 TNVGGYNLIVAAMSTDDVPC-----PLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp EEEEEEEEEEEEBCCSSSCC-----SSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCC-----CCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 999981 10000000 0012335778899999965 8887664
No 100
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.57 E-value=0.00015 Score=53.49 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=55.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe-ccc--cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL-EFE--AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~-~~~--~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~ 75 (132)
+..|++.+ -+++.+|. |..++.+++..+|+++. -.+ ++| .+|+|+...++|.++.+ +.++ ++++.|+|
T Consensus 54 ~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~---~~~~-e~~rvLkp 127 (257)
T 4hg2_A 54 SLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD---RFWA-ELRRVARP 127 (257)
T ss_dssp HHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH---HHHH-HHHHHEEE
T ss_pred HHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH---HHHH-HHHHHcCC
Confidence 44566554 47889998 77888888888999988 444 555 39999999999877654 5789 99999999
Q ss_pred CC
Q 043665 76 ND 77 (132)
Q Consensus 76 ~g 77 (132)
||
T Consensus 128 gG 129 (257)
T 4hg2_A 128 GA 129 (257)
T ss_dssp EE
T ss_pred CC
Confidence 99
No 101
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.52 E-value=8.4e-05 Score=51.79 Aligned_cols=116 Identities=11% Similarity=0.087 Sum_probs=63.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccccC-------CCceEEEeh------hhhcCCChHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFEAI-------PPANVVLLK------WILHDWSDEE 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~~~-------P~~D~~ll~------~vlh~~~de~ 60 (132)
+..+++.+|+.+++.+|+ |..++.++. ..+++++. +++++ ..+|++++. ..++.++++.
T Consensus 45 ~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~ 124 (215)
T 4dzr_A 45 AVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSV 124 (215)
T ss_dssp HHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC-----------
T ss_pred HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhh
Confidence 467888999999999999 788888876 11567666 54432 349999984 4444444443
Q ss_pred H------------------HHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHH--hCCCeeeEEEe
Q 043665 61 S------------------LRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFL--AAGFSHYKITP 120 (132)
Q Consensus 61 ~------------------~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~ 120 (132)
. ..+++ ++++.|+|||-. ..+. . .....+++.++++ ++||..+++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG~l----~~~~------~--~~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 125 RDYEPRLALDGGEDGLQFYRRMAA-LPPYVLARGRAG----VFLE------V--GHNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp -------------CTTHHHHHHHT-CCGGGBCSSSEE----EEEE------C--TTSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred hccCccccccCCCcHHHHHHHHHH-HHHHHhcCCCeE----EEEE------E--CCccHHHHHHHHHHhhcCCceEEEEE
Confidence 3 78889 999999998620 0000 0 1245788999999 99999877765
Q ss_pred c-CCcceEEEE
Q 043665 121 N-LGLWSLIEA 130 (132)
Q Consensus 121 ~-~~~~~~ie~ 130 (132)
. .+...++.+
T Consensus 192 ~~~~~~r~~~~ 202 (215)
T 4dzr_A 192 DLRGIDRVIAV 202 (215)
T ss_dssp CTTSCEEEEEE
T ss_pred ecCCCEEEEEE
Confidence 4 344444433
No 102
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.51 E-value=0.00041 Score=52.26 Aligned_cols=67 Identities=6% Similarity=-0.030 Sum_probs=50.5
Q ss_pred CCCeEEEeec-hhHHhhhcC-----CC-------CeEEEe-cc------c----cCC--CceEEEehhhhcC-CChHHHH
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-----TN-------NLEFFL-EF------E----AIP--PANVVLLKWILHD-WSDEESL 62 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-----~~-------ri~~~~-~~------~----~~P--~~D~~ll~~vlh~-~~de~~~ 62 (132)
...+++.+|+ +..++.|++ .. +++|.. .. + +.| .+|+|++..++|. |++++..
T Consensus 70 ~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~ 149 (302)
T 2vdw_A 70 EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYA 149 (302)
T ss_dssp TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHH
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHH
Confidence 3468999998 778888875 21 256655 22 1 234 4999999999997 5656668
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
.+|+ ++++.|+|||
T Consensus 150 ~~l~-~~~r~LkpGG 163 (302)
T 2vdw_A 150 TVMN-NLSELTASGG 163 (302)
T ss_dssp HHHH-HHHHHEEEEE
T ss_pred HHHH-HHHHHcCCCC
Confidence 9999 9999999999
No 103
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.51 E-value=0.0005 Score=46.93 Aligned_cols=113 Identities=11% Similarity=0.039 Sum_probs=75.8
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CC--CeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TN--NLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~--ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
..+++. ..+++.+|. |..++.++. .. |++++. +.+..+ .+|++++...+| ++.+....+++ ++
T Consensus 68 ~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~-~~~~~~~~~l~-~~ 143 (194)
T 1dus_A 68 IALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIR-AGKEVLHRIIE-EG 143 (194)
T ss_dssp HHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCST-TCHHHHHHHHH-HH
T ss_pred HHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCcc-cchhHHHHHHH-HH
Confidence 345555 778999998 778887765 22 599888 666544 499999988776 45667789999 99
Q ss_pred hhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEEC
Q 043665 70 EESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAYP 132 (132)
Q Consensus 70 ~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~p 132 (132)
.+.|+|||-. .+ ...+. ....++.+.+++. |...++......+.++.+++
T Consensus 144 ~~~L~~gG~l-----~~-----~~~~~--~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 144 KELLKDNGEI-----WV-----VIQTK--QGAKSLAKYMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHHEEEEEEE-----EE-----EEEST--HHHHHHHHHHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHHcCCCCEE-----EE-----EECCC--CChHHHHHHHHHH-hcceEEEecCCcEEEEEEee
Confidence 9999998720 00 00000 1124678888887 66666666656667766653
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.50 E-value=0.0004 Score=48.96 Aligned_cols=115 Identities=10% Similarity=-0.071 Sum_probs=67.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhh----hcC------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChH---H---
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWII----WWG------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDE---E--- 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~----a~~------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de---~--- 60 (132)
+..+++.+|+.+++.+|+ |..++. +++ .++++++. +.+ +.+. .|.+.+ ...|... .
T Consensus 42 ~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~---~~~~~~~~~~~~~~ 118 (218)
T 3mq2_A 42 PYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV---LMPWGSLLRGVLGS 118 (218)
T ss_dssp HHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE---ESCCHHHHHHHHTS
T ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE---Eccchhhhhhhhcc
Confidence 567889999999999999 554553 222 34888887 444 3331 366652 2222221 0
Q ss_pred HHHHHHHHhhhhCCCCCC------C-CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 61 SLRYLKKKCEESIPSNDE------G-RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g~------~-~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
...+|+ ++++.|+|||- . ........+.-. ..-...+..+++..+++++||++.++...
T Consensus 119 ~~~~l~-~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 119 SPEMLR-GMAAVCRPGASFLVALNLHAWRPSVPEVGEH-PEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp SSHHHH-HHHHTEEEEEEEEEEEEGGGBTTBCGGGTTC-CCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHH-HHHHHcCCCcEEEEEeccccccccccccccC-CccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 167899 99999999991 0 000000011100 00112233456888999999999887654
No 105
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.48 E-value=0.00013 Score=53.43 Aligned_cols=75 Identities=13% Similarity=-0.015 Sum_probs=51.8
Q ss_pred CceEEEehhhhcCC--ChHHHHHHHHHHhhhhCCCCCC------CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCe
Q 043665 43 PANVVLLKWILHDW--SDEESLRYLKKKCEESIPSNDE------GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFS 114 (132)
Q Consensus 43 ~~D~~ll~~vlh~~--~de~~~~iL~~~~~~al~~~g~------~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~ 114 (132)
.+|+|+...+||.. +.++-..+|+ ++++.|+|||- .........-. .......|.+++.++|+++||+
T Consensus 156 ~fD~V~~~~~l~~i~~~~~~~~~~l~-~i~r~LKPGG~li~~~~~~~~~~~~g~~---~~~~~~~~~~~l~~~l~~aGF~ 231 (263)
T 2a14_A 156 LADCVLTLLAMECACCSLDAYRAALC-NLASLLKPGGHLVTTVTLRLPSYMVGKR---EFSCVALEKGEVEQAVLDAGFD 231 (263)
T ss_dssp CEEEEEEESCHHHHCSSHHHHHHHHH-HHHTTEEEEEEEEEEEESSCCEEEETTE---EEECCCCCHHHHHHHHHHTTEE
T ss_pred CCCEeeehHHHHHhcCCHHHHHHHHH-HHHHHcCCCcEEEEEEeecCccceeCCe---EeeccccCHHHHHHHHHHCCCE
Confidence 59999999999974 2356788999 99999999991 11100000000 0111235899999999999999
Q ss_pred eeEEEec
Q 043665 115 HYKITPN 121 (132)
Q Consensus 115 ~~~~~~~ 121 (132)
++++...
T Consensus 232 i~~~~~~ 238 (263)
T 2a14_A 232 IEQLLHS 238 (263)
T ss_dssp EEEEEEE
T ss_pred EEEEeec
Confidence 9887643
No 106
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.48 E-value=5.5e-05 Score=54.82 Aligned_cols=112 Identities=11% Similarity=-0.045 Sum_probs=65.1
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe-----ccccCC--CceEEEe-----hhhhcCCChHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL-----EFEAIP--PANVVLL-----KWILHDWSDEESLRY 64 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~-----~~~~~P--~~D~~ll-----~~vlh~~~de~~~~i 64 (132)
..+++.+|. +.+++|+ |.+++.|++ ..+++++. ...++| .+|.+++ ...++.+.| ...+
T Consensus 76 ~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~--~~~~ 152 (236)
T 3orh_A 76 SKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQ--FNFI 152 (236)
T ss_dssp HHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHH--HHHH
T ss_pred HHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcc--hhhh
Confidence 445665664 7899998 889998875 44566655 222455 3888865 444444444 6788
Q ss_pred HHHHhhhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEE
Q 043665 65 LKKKCEESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 65 L~~~~~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
++ .+++.|+|||-. ......-+..-....+-.....+.+...|.++||+...+
T Consensus 153 ~~-e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 153 KN-HAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp HH-THHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hh-hhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEEE
Confidence 99 999999999820 000000000000000111123456778889999997544
No 107
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.46 E-value=0.0001 Score=56.20 Aligned_cols=75 Identities=15% Similarity=0.082 Sum_probs=59.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccccCC-CceEEEehhhhcC---CChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFEAIP-PANVVLLKWILHD---WSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~~~P-~~D~~ll~~vlh~---~~de~~~~iL~~~~ 69 (132)
+..+++.+|+.+++.+|. |..++.+++ .-++++.. +++..+ .+|+|++...+|. ++.+....+++ ++
T Consensus 211 ~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~-~~ 289 (343)
T 2pjd_A 211 SVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIR-GA 289 (343)
T ss_dssp HHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCCSSSHHHHHHHHHHHH-HH
T ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCCcccCccCCHHHHHHHHH-HH
Confidence 467888999999999999 667887765 22345555 655444 4999999999997 46677899999 99
Q ss_pred hhhCCCCC
Q 043665 70 EESIPSND 77 (132)
Q Consensus 70 ~~al~~~g 77 (132)
++.|+|||
T Consensus 290 ~~~LkpgG 297 (343)
T 2pjd_A 290 VRHLNSGG 297 (343)
T ss_dssp GGGEEEEE
T ss_pred HHhCCCCc
Confidence 99999998
No 108
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.42 E-value=0.00037 Score=48.79 Aligned_cols=95 Identities=14% Similarity=-0.004 Sum_probs=65.4
Q ss_pred eEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC------CC
Q 043665 13 KCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND------EG 79 (132)
Q Consensus 13 ~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g------~~ 79 (132)
+++.+|. |..++.+++ ..+++++. +.+ +++ .+|++++.+++|.+++ ..++|+ ++++.|+||| +.
T Consensus 58 ~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~-~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 58 QKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED--VERVLL-EARRVLRPGGALVVGVLE 134 (211)
T ss_dssp EEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC--HHHHHH-HHHHHEEEEEEEEEEEEC
T ss_pred eEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC--HHHHHH-HHHHHcCCCCEEEEEecC
Confidence 7899998 677777776 46788877 433 444 3999999999999986 468999 9999999999 11
Q ss_pred Cc--chhhhhhh-hh---hcCCCccCCHHHHHHHHHhCC
Q 043665 80 RK--TQLCFDLL-MA---TFLNGKEGSVYDWKKLFLAAG 112 (132)
Q Consensus 80 ~~--~~~~~dl~-m~---~~~~g~~rt~~e~~~ll~~aG 112 (132)
+. ........ .. .......+|.++++++|+ |
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 135 ALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp TTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred CcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 11 11111000 00 001245589999999999 7
No 109
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.42 E-value=0.00036 Score=52.15 Aligned_cols=117 Identities=8% Similarity=-0.154 Sum_probs=78.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------------CCCeEEEe--ccc-c----C--C--CceEEEehhhhcCC-
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------------TNNLEFFL--EFE-A----I--P--PANVVLLKWILHDW- 56 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------------~~ri~~~~--~~~-~----~--P--~~D~~ll~~vlh~~- 56 (132)
..+++ .+..+++.+|+ |..++.+++ ..+++++. +.+ + + + .+|+++...++|..
T Consensus 50 ~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~ 128 (313)
T 3bgv_A 50 LKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSF 128 (313)
T ss_dssp HHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGG
T ss_pred HHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhcc
Confidence 34454 57789999998 677777764 12688877 443 2 3 2 49999999999986
Q ss_pred -ChHHHHHHHHHHhhhhCCCCC------CC-------------Ccch-h-----hhhh---hhhh-----------cCCC
Q 043665 57 -SDEESLRYLKKKCEESIPSND------EG-------------RKTQ-L-----CFDL---LMAT-----------FLNG 96 (132)
Q Consensus 57 -~de~~~~iL~~~~~~al~~~g------~~-------------~~~~-~-----~~dl---~m~~-----------~~~g 96 (132)
+.++...+|+ ++++.|+||| +. .... . ..+. .-+. ....
T Consensus 129 ~~~~~~~~~l~-~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~ 207 (313)
T 3bgv_A 129 ESYEQADMMLR-NACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPE 207 (313)
T ss_dssp GSHHHHHHHHH-HHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEE
T ss_pred CCHHHHHHHHH-HHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcc
Confidence 4467789999 9999999999 10 0000 0 0010 0000 0112
Q ss_pred ccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 97 KEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 97 ~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
...+.+++.++++++||+++.....
T Consensus 208 ~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 208 FLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp ECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred eEEcHHHHHHHHHHcCcEEEEecCH
Confidence 2367899999999999999887653
No 110
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.41 E-value=0.00014 Score=58.41 Aligned_cols=73 Identities=10% Similarity=-0.062 Sum_probs=60.3
Q ss_pred HHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 3 RAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
..++ +.|..+++.+|+...++.+++ .+||+++. +++ ++|+ +|+|+...++|.+.++.....+. ++++
T Consensus 174 ~~la-~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~~~~~e~~~~~l~-~~~~ 251 (480)
T 3b3j_A 174 FFAA-QAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYL-HAKK 251 (480)
T ss_dssp HHHH-HTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHHHHTCHHHHHHHH-HGGG
T ss_pred HHHH-HcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchHhcCcHHHHHHHH-HHHH
Confidence 3344 478889999999777777764 37899998 666 5664 99999988889998888899999 9999
Q ss_pred hCCCCC
Q 043665 72 SIPSND 77 (132)
Q Consensus 72 al~~~g 77 (132)
.|+|||
T Consensus 252 ~LkpgG 257 (480)
T 3b3j_A 252 YLKPSG 257 (480)
T ss_dssp GEEEEE
T ss_pred hcCCCC
Confidence 999999
No 111
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.40 E-value=0.00083 Score=45.98 Aligned_cols=100 Identities=6% Similarity=-0.034 Sum_probs=69.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCCCCeEEEe--ccccCC--CceEEEehhhhcCCChH-------HHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFEAIP--PANVVLLKWILHDWSDE-------ESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de-------~~~~iL~~~~ 69 (132)
+..++++. +++.+|+ |..++. ..+++++. ++++.+ .+|+++....+|..++. +...+++ ++
T Consensus 38 ~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~-~~ 110 (170)
T 3q87_B 38 TEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVID-RF 110 (170)
T ss_dssp HHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHH-HH
T ss_pred HHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCccccccCCcchHHHHH-HH
Confidence 34555555 8999998 666666 56788887 666665 39999998888865544 4567888 88
Q ss_pred hhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 70 EESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 70 ~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.+.+ |||-. .+ ......+.+++.++++++||+...+...
T Consensus 111 ~~~l-pgG~l-----~~-------~~~~~~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 111 VDAV-TVGML-----YL-------LVIEANRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp HHHC-CSSEE-----EE-------EEEGGGCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HhhC-CCCEE-----EE-------EEecCCCHHHHHHHHHHCCCcEEEEEee
Confidence 8888 77621 00 0011135789999999999998877654
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.39 E-value=0.00011 Score=52.83 Aligned_cols=105 Identities=11% Similarity=0.007 Sum_probs=64.8
Q ss_pred CCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc---cCC--CceEEEe-hhh--hcCCChHHHHHHHHHHhhhh
Q 043665 9 FPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE---AIP--PANVVLL-KWI--LHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 9 ~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~---~~P--~~D~~ll-~~v--lh~~~de~~~~iL~~~~~~a 72 (132)
++..+++.+|. |.+++.+++ ..+++++. +.+ +++ .+|++++ .+. .+++..+....+|+ ++++.
T Consensus 81 ~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~-~~~r~ 159 (236)
T 1zx0_A 81 APIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKN-HAFRL 159 (236)
T ss_dssp SCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHH-THHHH
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHH-HHHHh
Confidence 33348899998 778887765 36788877 322 455 3999988 554 55666666678899 99999
Q ss_pred CCCCCCC--Ccchhhhhhhhhhc-CCCccCCHHHHHHHHHhCCCee
Q 043665 73 IPSNDEG--RKTQLCFDLLMATF-LNGKEGSVYDWKKLFLAAGFSH 115 (132)
Q Consensus 73 l~~~g~~--~~~~~~~dl~m~~~-~~g~~rt~~e~~~ll~~aGf~~ 115 (132)
|+|||-. ..... .+-.+-.. ........+++...+.++||+.
T Consensus 160 LkpgG~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 160 LKPGGVLTYCNLTS-WGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEEEEEECCHHH-HHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred cCCCeEEEEEecCc-HHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 9999820 00000 00000000 0111222456677899999985
No 113
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.39 E-value=0.00073 Score=47.94 Aligned_cols=108 Identities=14% Similarity=0.098 Sum_probs=70.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--c--cccCC--CceEEEehhhhcCCChHH----------
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--E--FEAIP--PANVVLLKWILHDWSDEE---------- 60 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~--~~~~P--~~D~~ll~~vlh~~~de~---------- 60 (132)
..+++.+ ..+++.+|. |..++.++. .-+++++. . +.+++ .+|++++.-..|..+++.
T Consensus 72 ~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~ 150 (230)
T 3evz_A 72 LMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGG 150 (230)
T ss_dssp HHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------C
T ss_pred HHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhcc
Confidence 4455555 788999998 778888775 23788887 3 44555 399999876665544422
Q ss_pred -------HHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCC
Q 043665 61 -------SLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG 123 (132)
Q Consensus 61 -------~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 123 (132)
...+++ .+.+.|+|||-. .+ . ......+.+++.++++++||.+..+....+
T Consensus 151 ~~~~~~~~~~~l~-~~~~~LkpgG~l-----~~-----~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 151 GKYGEEFSVKLLE-EAFDHLNPGGKV-----AL-----Y-LPDKEKLLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp CSSSCHHHHHHHH-HHGGGEEEEEEE-----EE-----E-EESCHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred CccchHHHHHHHH-HHHHHhCCCeEE-----EE-----E-ecccHhHHHHHHHHHHHcCCceEEEEecCC
Confidence 377889 999999998720 00 0 000112357899999999998888766554
No 114
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.38 E-value=0.0018 Score=47.07 Aligned_cols=111 Identities=10% Similarity=0.017 Sum_probs=81.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
++.+++.+|..+++.+|. |..++.|++ .+||++.. .++++| .+|+++...+ ..+....||. .
T Consensus 30 ~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~----Gg~~i~~Il~-~ 104 (225)
T 3kr9_A 30 PIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM----GGRLIARILE-E 104 (225)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE----CHHHHHHHHH-H
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC----ChHHHHHHHH-H
Confidence 567888899999999998 778888775 56899988 777765 4999998765 4455789999 9
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec--CC-cceEEEEE
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN--LG-LWSLIEAY 131 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~--~~-~~~~ie~~ 131 (132)
+.+.|+++|. +....+ -..+..+++|.+.||.+.+..-+ .+ ...+|.+.
T Consensus 105 ~~~~L~~~~~-----------lVlq~~---~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 105 GLGKLANVER-----------LILQPN---NREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp TGGGCTTCCE-----------EEEEES---SCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHhCCCCE-----------EEEECC---CCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 9988887631 111111 24779999999999998775432 33 45666654
No 115
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.38 E-value=0.00081 Score=48.05 Aligned_cols=120 Identities=6% Similarity=-0.055 Sum_probs=71.4
Q ss_pred HHHHHHHC-CCCeEEEeec-hh----HHhhhcCCCCeEEEe--cccc--C---C-CceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LL----WWIIWWGTNNLEFFL--EFEA--I---P-PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~----v~~~a~~~~ri~~~~--~~~~--~---P-~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++.+ |+.+++.+|+ |. .++.++...+++++. +.++ + + .+|++++... ..+....+++
T Consensus 92 ~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~----~~~~~~~~~~- 166 (233)
T 2ipx_A 92 VSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA----QPDQTRIVAL- 166 (233)
T ss_dssp HHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC----CTTHHHHHHH-
T ss_pred HHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC----CccHHHHHHH-
Confidence 45567775 7889999999 43 344444457898887 5442 2 2 3899998332 4445677888
Q ss_pred HhhhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCC---cceEEEEE
Q 043665 68 KCEESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG---LWSLIEAY 131 (132)
Q Consensus 68 ~~~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~---~~~~ie~~ 131 (132)
++++.|+|||-. .-.....+.. .....+-..+ .++|+++||++.++.+... .+.++.++
T Consensus 167 ~~~~~LkpgG~l~i~~~~~~~~~~----~~~~~~~~~~-~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 167 NAHTFLRNGGHFVISIKANCIDST----ASAEAVFASE-VKKMQQENMKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp HHHHHEEEEEEEEEEEEHHHHCSS----SCHHHHHHHH-HHTTGGGTEEEEEEEECTTTSSSEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEcccccccC----CCHHHHHHHH-HHHHHHCCCceEEEEecCCccCCcEEEEEE
Confidence 999999999810 0000000000 0000011123 6899999999988766543 35666554
No 116
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.35 E-value=0.0016 Score=45.86 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=54.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-c--CC--CceEEEehhhhcCCChH-------H
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-A--IP--PANVVLLKWILHDWSDE-------E 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~--~P--~~D~~ll~~vlh~~~de-------~ 60 (132)
+..+++.+|+.+++.+|. |..++.++. .++++++. ..+ + ++ .+|++++....+ |... .
T Consensus 56 ~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~ 134 (214)
T 1yzh_A 56 VSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDP-WPKKRHEKRRLT 134 (214)
T ss_dssp HHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCC-CCSGGGGGGSTT
T ss_pred HHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCCC-ccccchhhhccC
Confidence 467889999999999998 788887765 36898887 443 2 44 389998864332 3221 1
Q ss_pred HHHHHHHHhhhhCCCCC
Q 043665 61 SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g 77 (132)
...+|+ ++.+.|+|||
T Consensus 135 ~~~~l~-~~~~~LkpgG 150 (214)
T 1yzh_A 135 YKTFLD-TFKRILPENG 150 (214)
T ss_dssp SHHHHH-HHHHHSCTTC
T ss_pred CHHHHH-HHHHHcCCCc
Confidence 257899 9999999998
No 117
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.30 E-value=0.0003 Score=47.70 Aligned_cols=97 Identities=9% Similarity=-0.069 Sum_probs=68.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccC----CCceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAI----PPANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~----P~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++.+|+.+++.+|. |..++.+++ .+++ ++. ..+.+ ..+|++++...+|. ..+++
T Consensus 40 ~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~------~~~l~- 111 (178)
T 3hm2_A 40 AIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA------PGVFA- 111 (178)
T ss_dssp HHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC------TTHHH-
T ss_pred HHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcccH------HHHHH-
Confidence 456788899999999999 678887764 3478 554 44432 34999999999986 67889
Q ss_pred HhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEE
Q 043665 68 KCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 68 ~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
++.+.|+|||-. .+. .....+..++..++++.|+...++
T Consensus 112 ~~~~~L~~gG~l-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 112 AAWKRLPVGGRL-----VAN-------AVTVESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp HHHHTCCTTCEE-----EEE-------ECSHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHhcCCCCEE-----EEE-------eeccccHHHHHHHHHHcCCeeEEE
Confidence 999999999721 000 000123567888889999887664
No 118
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.28 E-value=0.00023 Score=54.35 Aligned_cols=75 Identities=11% Similarity=0.220 Sum_probs=56.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--cc---ccCC--CceEEEehhhhcCCChHH--HHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EF---EAIP--PANVVLLKWILHDWSDEE--SLRYL 65 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~---~~~P--~~D~~ll~~vlh~~~de~--~~~iL 65 (132)
+..+++.+|+.+++++|+ |.+++.+++ .+|++++. .+ ...+ .||+|++.-..|...... ..+++
T Consensus 104 a~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl 183 (317)
T 3gjy_A 104 ARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFF 183 (317)
T ss_dssp HHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHH
T ss_pred HHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHH
Confidence 567788899999999999 889998875 46899887 33 3444 499999865444332222 26889
Q ss_pred HHHhhhhCCCCC
Q 043665 66 KKKCEESIPSND 77 (132)
Q Consensus 66 ~~~~~~al~~~g 77 (132)
+ .+++.|+|||
T Consensus 184 ~-~~~r~LkpgG 194 (317)
T 3gjy_A 184 E-HCHRGLAPGG 194 (317)
T ss_dssp H-HHHHHEEEEE
T ss_pred H-HHHHhcCCCc
Confidence 9 9999999998
No 119
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.27 E-value=0.00065 Score=49.01 Aligned_cols=99 Identities=12% Similarity=0.136 Sum_probs=70.5
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCCC--ceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIPP--ANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P~--~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++. .|..+++.+|+ |..++.+++ .+|+++.. +.+.++. +|++++ ++++. ..+|+ +
T Consensus 108 ~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~-----~~~~~--~~~l~-~ 179 (255)
T 3mb5_A 108 TLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVIL-----DLPQP--ERVVE-H 179 (255)
T ss_dssp HHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEE-----CSSCG--GGGHH-H
T ss_pred HHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEE-----CCCCH--HHHHH-H
Confidence 4567777 89999999999 788888775 46799988 6666663 999987 44443 56899 9
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCC--CeeeEEEe
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAG--FSHYKITP 120 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aG--f~~~~~~~ 120 (132)
+.+.|+|||-.-- . .....+.+++.++++++| |...++..
T Consensus 180 ~~~~L~~gG~l~~----~--------~~~~~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 180 AAKALKPGGFFVA----Y--------TPCSNQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp HHHHEEEEEEEEE----E--------ESSHHHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred HHHHcCCCCEEEE----E--------ECCHHHHHHHHHHHHHcCCCccccEEEE
Confidence 9999999872100 0 000013567888999999 98776643
No 120
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.25 E-value=0.00038 Score=50.92 Aligned_cols=109 Identities=12% Similarity=0.003 Sum_probs=72.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..+++..+ +++.+|. |..++.+++ .-.+++.. +.+.+| .+|+++..... +....+++ ++++
T Consensus 135 ~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~-----~~~~~~l~-~~~~ 206 (254)
T 2nxc_A 135 AIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYA-----ELHAALAP-RYRE 206 (254)
T ss_dssp HHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCH-----HHHHHHHH-HHHH
T ss_pred HHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcH-----HHHHHHHH-HHHH
Confidence 345566555 9999998 778887765 11177776 444443 49999975433 34578999 9999
Q ss_pred hCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCcceEEEEE
Q 043665 72 SIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGLWSLIEAY 131 (132)
Q Consensus 72 al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~ie~~ 131 (132)
.|+|||-. .+ .+-...+.+++.++++++||++.++...++. ..+.++
T Consensus 207 ~LkpgG~l-----il-------s~~~~~~~~~v~~~l~~~Gf~~~~~~~~~~W-~~l~~~ 253 (254)
T 2nxc_A 207 ALVPGGRA-----LL-------TGILKDRAPLVREAMAGAGFRPLEEAAEGEW-VLLAYG 253 (254)
T ss_dssp HEEEEEEE-----EE-------EEEEGGGHHHHHHHHHHTTCEEEEEEEETTE-EEEEEE
T ss_pred HcCCCCEE-----EE-------EeeccCCHHHHHHHHHHCCCEEEEEeccCCe-EEEEEE
Confidence 99998720 00 0001124789999999999999988776554 334444
No 121
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.21 E-value=0.00036 Score=48.57 Aligned_cols=74 Identities=11% Similarity=-0.040 Sum_probs=56.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCC--CceEEEehhhhcCCC-------------h
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIP--PANVVLLKWILHDWS-------------D 58 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~-------------d 58 (132)
+..+++..+. +++.+|. |..++.+++ .+++++.. +.+ +++ .+|+++...++|... .
T Consensus 57 ~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~ 135 (215)
T 2pxx_A 57 SYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGV 135 (215)
T ss_dssp HHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHH
T ss_pred HHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchh
Confidence 3456666555 8999998 778887775 36888887 554 454 399999988887654 5
Q ss_pred HHHHHHHHHHhhhhCCCCC
Q 043665 59 EESLRYLKKKCEESIPSND 77 (132)
Q Consensus 59 e~~~~iL~~~~~~al~~~g 77 (132)
++...+|+ ++++.|+|||
T Consensus 136 ~~~~~~l~-~~~~~LkpgG 153 (215)
T 2pxx_A 136 HTVDQVLS-EVSRVLVPGG 153 (215)
T ss_dssp HHHHHHHH-HHHHHEEEEE
T ss_pred HHHHHHHH-HHHHhCcCCC
Confidence 56789999 9999999998
No 122
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.14 E-value=0.0046 Score=45.09 Aligned_cols=111 Identities=9% Similarity=-0.093 Sum_probs=79.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
++.+++..|..+++..|. |..++.|++ .+||++.. .++.++ .+|++++.++. .+....||. .
T Consensus 36 ~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG----g~lI~~IL~-~ 110 (230)
T 3lec_A 36 PIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG----GRLIADILN-N 110 (230)
T ss_dssp HHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC----HHHHHHHHH-H
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc----hHHHHHHHH-H
Confidence 567888889999999998 778888875 57899998 777543 48999987654 356788999 8
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec---CCcceEEEEE
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN---LGLWSLIEAY 131 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~---~~~~~~ie~~ 131 (132)
..+.|+++|. +.+..+ ...++++++|.+.||.+.+..-+ +-...+|.+.
T Consensus 111 ~~~~l~~~~~-----------lIlqp~---~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 111 DIDKLQHVKT-----------LVLQPN---NREDDLRKWLAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp TGGGGTTCCE-----------EEEEES---SCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred HHHHhCcCCE-----------EEEECC---CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 8887776531 111111 23789999999999998875532 3356677665
No 123
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.12 E-value=6.6e-05 Score=53.81 Aligned_cols=73 Identities=11% Similarity=-0.095 Sum_probs=57.3
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEeccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFLEFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
+..++...|+.+.+..|. +..++.+++ ..++++....+ +.|+ ||+++.-++||.. + +....+. ++.+
T Consensus 64 Al~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHlL-~-~~~~al~-~v~~ 140 (200)
T 3fzg_A 64 ALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVL-K-QQDVNIL-DFLQ 140 (200)
T ss_dssp HHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHHH-H-HTTCCHH-HHHH
T ss_pred HHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHhh-h-hhHHHHH-HHHH
Confidence 566778899999999999 778888875 33788744444 4444 9999999999999 3 4466667 7999
Q ss_pred hCCCCC
Q 043665 72 SIPSND 77 (132)
Q Consensus 72 al~~~g 77 (132)
+|+|||
T Consensus 141 ~L~pgg 146 (200)
T 3fzg_A 141 LFHTQN 146 (200)
T ss_dssp TCEEEE
T ss_pred HhCCCC
Confidence 999997
No 124
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.12 E-value=0.0041 Score=45.19 Aligned_cols=115 Identities=10% Similarity=-0.023 Sum_probs=75.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cCC--CceEEEehhhhcCC----------
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AIP--PANVVLLKWILHDW---------- 56 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~P--~~D~~ll~~vlh~~---------- 56 (132)
+..++++.+. +++.+|+ |..++.++. .+|++++. +.+ .++ .+|++++.-..+..
T Consensus 64 ~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~ 142 (259)
T 3lpm_A 64 PLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNE 142 (259)
T ss_dssp HHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-------------
T ss_pred HHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCch
Confidence 3456666666 9999998 778887765 46899988 554 233 39999985332211
Q ss_pred --------ChHHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec---CC--
Q 043665 57 --------SDEESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN---LG-- 123 (132)
Q Consensus 57 --------~de~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~---~~-- 123 (132)
.......+++ .+.+.|+|||-. .+ + . ......++..++++.||...++.++ .+
T Consensus 143 ~~~~a~~~~~~~~~~~l~-~~~~~LkpgG~l-----~~-----~-~--~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~ 208 (259)
T 3lpm_A 143 HFRIARHEVMCTLEDTIR-VAASLLKQGGKA-----NF-----V-H--RPERLLDIIDIMRKYRLEPKRIQFVHPRSDRE 208 (259)
T ss_dssp ----------HHHHHHHH-HHHHHEEEEEEE-----EE-----E-E--CTTTHHHHHHHHHHTTEEEEEEEEEESSTTSC
T ss_pred HHHhhhccccCCHHHHHH-HHHHHccCCcEE-----EE-----E-E--cHHHHHHHHHHHHHCCCceEEEEEeecCCCCC
Confidence 1133467899 999999998720 00 0 0 1135678999999999998877554 22
Q ss_pred -cceEEEEE
Q 043665 124 -LWSLIEAY 131 (132)
Q Consensus 124 -~~~~ie~~ 131 (132)
...++|++
T Consensus 209 ~~~~l~~~~ 217 (259)
T 3lpm_A 209 ANTVLVEGI 217 (259)
T ss_dssp CSEEEEEEE
T ss_pred cEEEEEEEE
Confidence 35677765
No 125
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.08 E-value=0.00074 Score=49.68 Aligned_cols=99 Identities=14% Similarity=-0.001 Sum_probs=68.9
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC----C---CCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG----T---NNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~----~---~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++. +|..+++.+|. |..++.+++ . ++++++. +.++++ .+|++++ ++++. ..+|+ +
T Consensus 125 ~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~-----~~~~~--~~~l~-~ 196 (275)
T 1yb2_A 125 SSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIA-----DIPDP--WNHVQ-K 196 (275)
T ss_dssp HHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEE-----CCSCG--GGSHH-H
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEE-----cCcCH--HHHHH-H
Confidence 4566776 79999999999 888887765 2 5788887 666655 3999998 44443 47899 9
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
+.+.|+|||-.- + .+.. ....+++.+.++++||+..++..
T Consensus 197 ~~~~LkpgG~l~-----i------~~~~-~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 197 IASMMKPGSVAT-----F------YLPN-FDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp HHHTEEEEEEEE-----E------EESS-HHHHHHHHHHSGGGTEEEEEEEE
T ss_pred HHHHcCCCCEEE-----E------EeCC-HHHHHHHHHHHHHCCCeEEEEEE
Confidence 999999987200 0 0000 01246778888899999877654
No 126
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.06 E-value=0.00018 Score=51.32 Aligned_cols=94 Identities=6% Similarity=-0.010 Sum_probs=68.3
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--cccc--CC---CceEEEehhhhcCCChHHHHHHHHHHhhhhC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFEA--IP---PANVVLLKWILHDWSDEESLRYLKKKCEESI 73 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~~--~P---~~D~~ll~~vlh~~~de~~~~iL~~~~~~al 73 (132)
..+++. +.+++.+|. |..++.+++ ..+++++. +.+. ++ .+|+|+.. .+...+|+ ++++.|
T Consensus 64 ~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~--------~~~~~~l~-~~~~~L 132 (226)
T 3m33_A 64 ARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR--------RGPTSVIL-RLPELA 132 (226)
T ss_dssp HHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------SCCSGGGG-GHHHHE
T ss_pred HHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------CCHHHHHH-HHHHHc
Confidence 445555 578999998 788888876 67899888 5453 33 39999886 13467889 999999
Q ss_pred CCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 74 PSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 74 ~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
+|||-.- .-+...+.+++.++++++||+...+..
T Consensus 133 kpgG~l~-------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 133 APDAHFL-------------YVGPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp EEEEEEE-------------EEESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred CCCcEEE-------------EeCCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 9987311 112234667899999999999877654
No 127
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.05 E-value=0.0036 Score=44.90 Aligned_cols=101 Identities=14% Similarity=0.054 Sum_probs=68.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cC----C-CceEEEehhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AI----P-PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~----P-~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
+..++..+|+.+++.+|. |..++.+++ ..+|+++. +.+ +. + .+|+++...+ .+ ...+++
T Consensus 85 ~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~~--~~~~l~ 158 (240)
T 1xdz_A 85 SLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV----AR--LSVLSE 158 (240)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC----SC--HHHHHH
T ss_pred HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc----CC--HHHHHH
Confidence 456777799999999998 778777765 34688887 333 21 2 4999998763 22 578999
Q ss_pred HHhhhhCCCCCCCCcchhhhhhhhhhcCCC-ccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 67 KKCEESIPSNDEGRKTQLCFDLLMATFLNG-KEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 67 ~~~~~al~~~g~~~~~~~~~dl~m~~~~~g-~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
.+.+.|+|||-.- + ..+. .....+++.+.++++||++.++.+
T Consensus 159 -~~~~~LkpgG~l~----------~-~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 159 -LCLPLVKKNGLFV----------A-LKAASAEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp -HHGGGEEEEEEEE----------E-EECC-CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred -HHHHhcCCCCEEE----------E-EeCCCchHHHHHHHHHHHHcCCeEeEEEE
Confidence 9999999997210 0 0000 011235678889999999877654
No 128
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.03 E-value=0.00059 Score=52.97 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=58.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------C--CCeEEEe--ccccCC--CceEEEehhhhcC---CChHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------T--NNLEFFL--EFEAIP--PANVVLLKWILHD---WSDEESLRY 64 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~--~ri~~~~--~~~~~P--~~D~~ll~~vlh~---~~de~~~~i 64 (132)
+..+++++|+.+++.+|. |..++.+++ . .++++.. ++++++ .+|+|++.-.+|. .++....++
T Consensus 237 s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~ 316 (375)
T 4dcm_A 237 GLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 316 (375)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCCC-------CCHHHHH
T ss_pred HHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCCcccCcccCHHHHHHH
Confidence 567889999999999998 778887775 1 2577787 777666 3999999888884 456667789
Q ss_pred HHHHhhhhCCCCC
Q 043665 65 LKKKCEESIPSND 77 (132)
Q Consensus 65 L~~~~~~al~~~g 77 (132)
++ .+.+.|+|||
T Consensus 317 l~-~~~~~LkpgG 328 (375)
T 4dcm_A 317 FH-HARRCLKING 328 (375)
T ss_dssp HH-HHHHHEEEEE
T ss_pred HH-HHHHhCCCCc
Confidence 99 9999999998
No 129
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.03 E-value=0.0067 Score=42.85 Aligned_cols=120 Identities=10% Similarity=-0.041 Sum_probs=71.5
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhc----CCCCeEEEe--ccc-----cCC-CceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWW----GTNNLEFFL--EFE-----AIP-PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~----~~~ri~~~~--~~~-----~~P-~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++.. |+.+++.+|. |..++.+. ..++++++. +.+ +.+ .+|++++... ..+....+++
T Consensus 88 ~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~----~~~~~~~~l~- 162 (227)
T 1g8a_A 88 ASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA----QPTQAKILID- 162 (227)
T ss_dssp HHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC----STTHHHHHHH-
T ss_pred HHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC----CHhHHHHHHH-
Confidence 34566664 6789999998 54554443 346898887 544 123 3999996432 3334456699
Q ss_pred HhhhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCCc---ceEEEEEC
Q 043665 68 KCEESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLGL---WSLIEAYP 132 (132)
Q Consensus 68 ~~~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~---~~~ie~~p 132 (132)
++++.|+|||-. .......+.. ......+.+++.++ +++ |++.+....... +.++.+++
T Consensus 163 ~~~~~LkpgG~l~~~~~~~~~~~~----~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 163 NAEVYLKRGGYGMIAVKSRSIDVT----KEPEQVFREVEREL-SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp HHHHHEEEEEEEEEEEEGGGTCTT----SCHHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred HHHHhcCCCCEEEEEEecCCCCCC----CChhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 999999999820 0000000000 00112335778887 777 999888776543 66666653
No 130
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.94 E-value=0.0015 Score=47.37 Aligned_cols=70 Identities=9% Similarity=0.092 Sum_probs=54.0
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cCC---CceEEEehhhhcCCChHHHHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AIP---PANVVLLKWILHDWSDEESLRY 64 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~P---~~D~~ll~~vlh~~~de~~~~i 64 (132)
+..+++.+| +.+++.+|+ |..++.+++ .+||+++. ..+ ..+ .+|++++.. +.+.....
T Consensus 78 ~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~-----~~~~~~~~ 152 (248)
T 3tfw_A 78 TIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDA-----DKPNNPHY 152 (248)
T ss_dssp HHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS-----CGGGHHHH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC-----chHHHHHH
Confidence 456788888 899999999 888888775 46899987 433 222 499998843 45556789
Q ss_pred HHHHhhhhCCCCC
Q 043665 65 LKKKCEESIPSND 77 (132)
Q Consensus 65 L~~~~~~al~~~g 77 (132)
|+ ++.+.|+|||
T Consensus 153 l~-~~~~~LkpGG 164 (248)
T 3tfw_A 153 LR-WALRYSRPGT 164 (248)
T ss_dssp HH-HHHHTCCTTC
T ss_pred HH-HHHHhcCCCe
Confidence 99 9999999999
No 131
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.88 E-value=0.0014 Score=50.12 Aligned_cols=69 Identities=9% Similarity=-0.047 Sum_probs=56.4
Q ss_pred HCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhhhhCCCC
Q 043665 8 AFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76 (132)
Q Consensus 8 ~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~ 76 (132)
+.+..+++.+|....++.+++ .++|+++. +.+ +.|+ +|+++...++|.+..+.....+. ++++.|+||
T Consensus 70 ~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~~~~~~~~~~~l~-~~~~~Lkpg 148 (348)
T 2y1w_A 70 QAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYL-HAKKYLKPS 148 (348)
T ss_dssp HTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBTTBTTTSHHHHHH-HGGGGEEEE
T ss_pred hCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchhcCChHHHHHHHH-HHHhhcCCC
Confidence 357779999999777776654 37899988 544 4554 99999999999998888889999 999999999
Q ss_pred C
Q 043665 77 D 77 (132)
Q Consensus 77 g 77 (132)
|
T Consensus 149 G 149 (348)
T 2y1w_A 149 G 149 (348)
T ss_dssp E
T ss_pred e
Confidence 9
No 132
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.87 E-value=0.0066 Score=42.72 Aligned_cols=70 Identities=10% Similarity=0.078 Sum_probs=53.2
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC-----CCceEEEehhhhcCCChHHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI-----PPANVVLLKWILHDWSDEESL 62 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~-----P~~D~~ll~~vlh~~~de~~~ 62 (132)
+..+++++| +.+++.+|. |..++.+++ .+|++++. ..+ .+ ..+|++++... .+...
T Consensus 73 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~-----~~~~~ 147 (223)
T 3duw_A 73 TIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD-----KQNNP 147 (223)
T ss_dssp HHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC-----GGGHH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC-----cHHHH
Confidence 456788888 899999998 888887764 45799887 433 22 24999987433 44567
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
.+++ ++.+.|+|||
T Consensus 148 ~~l~-~~~~~L~pgG 161 (223)
T 3duw_A 148 AYFE-WALKLSRPGT 161 (223)
T ss_dssp HHHH-HHHHTCCTTC
T ss_pred HHHH-HHHHhcCCCc
Confidence 8999 9999999998
No 133
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=96.86 E-value=0.0023 Score=47.42 Aligned_cols=71 Identities=8% Similarity=0.011 Sum_probs=52.1
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC--CCC-eE--EEe-cc---ccCC-CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG--TNN-LE--FFL-EF---EAIP-PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~~r-i~--~~~-~~---~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
..++++ ..+++.+|. |.+++.+++ ... +. +.. -. ...+ .+|+++...++|.|++++....|+ ++++
T Consensus 61 ~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~-~l~~ 137 (261)
T 3iv6_A 61 EKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACL-GMLS 137 (261)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHH-HHHH
T ss_pred HHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHH-HHHH
Confidence 445554 568999998 778888876 222 22 211 11 1223 499999999999999999999999 9999
Q ss_pred hCCCCC
Q 043665 72 SIPSND 77 (132)
Q Consensus 72 al~~~g 77 (132)
.| |||
T Consensus 138 lL-PGG 142 (261)
T 3iv6_A 138 LV-GSG 142 (261)
T ss_dssp HH-TTS
T ss_pred hC-cCc
Confidence 99 999
No 134
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.82 E-value=0.0048 Score=43.44 Aligned_cols=95 Identities=11% Similarity=-0.098 Sum_probs=65.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cCCCceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AIPPANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~P~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
..+++. ..+++.+|. |..++.+++ .++++++. +.+ ..+.+|++++...+ + .. +++ .+
T Consensus 71 ~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~---~---~~-~l~-~~ 140 (204)
T 3njr_A 71 VEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG---S---QA-LYD-RL 140 (204)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC---C---HH-HHH-HH
T ss_pred HHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc---c---HH-HHH-HH
Confidence 455555 789999998 788887775 23899987 554 33469999987644 1 23 899 99
Q ss_pred hhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 70 EESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 70 ~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
.+.|+|||.. .+.. ....+..++.+++++.|+++.++.
T Consensus 141 ~~~LkpgG~l-----v~~~-------~~~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 141 WEWLAPGTRI-----VANA-------VTLESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHHSCTTCEE-----EEEE-------CSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred HHhcCCCcEE-----EEEe-------cCcccHHHHHHHHHhCCCcEEEEE
Confidence 9999999721 0000 001246788889999999887753
No 135
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.77 E-value=0.0037 Score=47.33 Aligned_cols=67 Identities=9% Similarity=0.063 Sum_probs=52.6
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
.++.+.|+.+++.+|+ |..++.|++ .+||+++. ..+ +| ++|++++.... ++-.++++ .+++.
T Consensus 139 ~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~d~~FDvV~~~a~~-----~d~~~~l~-el~r~ 211 (298)
T 3fpf_A 139 ILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-IDGLEFDVLMVAALA-----EPKRRVFR-NIHRY 211 (298)
T ss_dssp HHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GGGCCCSEEEECTTC-----SCHHHHHH-HHHHH
T ss_pred HHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CCCCCcCEEEECCCc-----cCHHHHHH-HHHHH
Confidence 3456678999999998 889998876 37899988 444 33 49999986542 33578999 99999
Q ss_pred CCCCC
Q 043665 73 IPSND 77 (132)
Q Consensus 73 l~~~g 77 (132)
|+|||
T Consensus 212 LkPGG 216 (298)
T 3fpf_A 212 VDTET 216 (298)
T ss_dssp CCTTC
T ss_pred cCCCc
Confidence 99999
No 136
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.73 E-value=0.0034 Score=42.59 Aligned_cols=94 Identities=9% Similarity=-0.015 Sum_probs=65.1
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccC---CCceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAI---PPANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~---P~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
..+++.. .+++.+|. |..++.+++ .+++++.. +.+++ +.+|++++...+|++ ..+|+ ++
T Consensus 49 ~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~-~~ 120 (192)
T 1l3i_A 49 LELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSGGEL-----QEILR-II 120 (192)
T ss_dssp HHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCTTCH-----HHHHH-HH
T ss_pred HHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCchHHH-----HHHHH-HH
Confidence 4455555 78999998 778887765 26888887 44433 359999998887653 77899 99
Q ss_pred hhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeee
Q 043665 70 EESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 70 ~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~ 116 (132)
.+.|+|||-. .+. .....+..++.+++++.||.+.
T Consensus 121 ~~~l~~gG~l-----~~~-------~~~~~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 121 KDKLKPGGRI-----IVT-------AILLETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp HHTEEEEEEE-----EEE-------ECBHHHHHHHHHHHHHTTCCCE
T ss_pred HHhcCCCcEE-----EEE-------ecCcchHHHHHHHHHHCCCceE
Confidence 9999998720 000 0001235788999999999543
No 137
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.68 E-value=0.0014 Score=48.13 Aligned_cols=99 Identities=14% Similarity=0.092 Sum_probs=68.0
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..++++ .|..+++.+|. |..++.+++ .+++++.. +.+.++ .+|++++ +.++ ...+|+ +
T Consensus 127 ~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~-----~~~~--~~~~l~-~ 198 (277)
T 1o54_A 127 CAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFL-----DVPD--PWNYID-K 198 (277)
T ss_dssp HHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEE-----CCSC--GGGTHH-H
T ss_pred HHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEE-----CCcC--HHHHHH-H
Confidence 4567777 78999999998 888887775 25888887 655555 3999987 3443 247889 9
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
+.+.|+|||-.--. ........++.+.++++||...++..
T Consensus 199 ~~~~L~pgG~l~~~------------~~~~~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 199 CWEALKGGGRFATV------------CPTTNQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp HHHHEEEEEEEEEE------------ESSHHHHHHHHHHHHHSSEEEEEEEC
T ss_pred HHHHcCCCCEEEEE------------eCCHHHHHHHHHHHHHCCCceeEEEE
Confidence 99999998720000 00001245677788889998776643
No 138
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.67 E-value=0.0029 Score=45.41 Aligned_cols=99 Identities=15% Similarity=0.005 Sum_probs=67.4
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--cccc-CC--CceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEA-IP--PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~-~P--~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++. .|..+++.+|. |..++.+++ .+++++.. +.+. ++ .+|++++ ++++. ..+|+
T Consensus 111 ~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~~~--~~~l~- 182 (258)
T 2pwy_A 111 TLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL-----DLMEP--WKVLE- 182 (258)
T ss_dssp HHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE-----ESSCG--GGGHH-
T ss_pred HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE-----CCcCH--HHHHH-
Confidence 4567777 78999999998 788887765 26888887 5553 65 3999997 34443 47899
Q ss_pred HhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 68 KCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 68 ~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
++.+.|+|||-.-- .. .......++.+.++++||...++..
T Consensus 183 ~~~~~L~~gG~l~~----~~--------~~~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 183 KAALALKPDRFLVA----YL--------PNITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHEEEEEEEEE----EE--------SCHHHHHHHHHHHTTTTEEEEEEEE
T ss_pred HHHHhCCCCCEEEE----Ee--------CCHHHHHHHHHHHHHCCCceEEEEE
Confidence 99999999872000 00 0001245777788889998766543
No 139
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.66 E-value=0.0043 Score=49.25 Aligned_cols=72 Identities=8% Similarity=-0.128 Sum_probs=53.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC---------------CCCeEEEe--ccc-cC----CCceEEEehhhhcCCCh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG---------------TNNLEFFL--EFE-AI----PPANVVLLKWILHDWSD 58 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~---------------~~ri~~~~--~~~-~~----P~~D~~ll~~vlh~~~d 58 (132)
+..+++.++.-+++.+|+ |..++.|+. .++|+|+. +++ ++ +.+|++++.++++ .
T Consensus 188 ~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F--~- 264 (438)
T 3uwp_A 188 VLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAF--G- 264 (438)
T ss_dssp HHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTC--C-
T ss_pred HHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEccccc--C-
Confidence 456777787777999999 556665542 27899998 665 33 3599999988774 2
Q ss_pred HHHHHHHHHHhhhhCCCCC
Q 043665 59 EESLRYLKKKCEESIPSND 77 (132)
Q Consensus 59 e~~~~iL~~~~~~al~~~g 77 (132)
++....|+ .+++.|+|||
T Consensus 265 pdl~~aL~-Ei~RvLKPGG 282 (438)
T 3uwp_A 265 PEVDHQLK-ERFANMKEGG 282 (438)
T ss_dssp HHHHHHHH-HHHTTSCTTC
T ss_pred chHHHHHH-HHHHcCCCCc
Confidence 34566678 8899999999
No 140
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.60 E-value=0.0075 Score=43.93 Aligned_cols=112 Identities=4% Similarity=-0.133 Sum_probs=73.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-c----CC-CceEEEehhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-A----IP-PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~----~P-~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
+..++..+|+.+++.+|. +..++.+++ ..+|+++. ..+ + .. .+|+++.+.+- + ...+++
T Consensus 95 ~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~-~-----~~~ll~ 168 (249)
T 3g89_A 95 GLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVA-P-----LCVLSE 168 (249)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSC-C-----HHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCcC-C-----HHHHHH
Confidence 466888899999999997 777777765 34688887 333 1 12 49999986542 2 357889
Q ss_pred HHhhhhCCCCCCCCcchhhhhhhhhhcCCC-ccCCHHHHHHHHHhCCCeeeEEEec--C---CcceEEEEE
Q 043665 67 KKCEESIPSNDEGRKTQLCFDLLMATFLNG-KEGSVYDWKKLFLAAGFSHYKITPN--L---GLWSLIEAY 131 (132)
Q Consensus 67 ~~~~~al~~~g~~~~~~~~~dl~m~~~~~g-~~rt~~e~~~ll~~aGf~~~~~~~~--~---~~~~~ie~~ 131 (132)
.+.+.|+|||-. . +..+. ..-...++...++..||+..++.+. + +..+++.+.
T Consensus 169 -~~~~~LkpgG~l------~-----~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~ 227 (249)
T 3g89_A 169 -LLLPFLEVGGAA------V-----AMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLE 227 (249)
T ss_dssp -HHGGGEEEEEEE------E-----EEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred -HHHHHcCCCeEE------E-----EEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEE
Confidence 999999998720 0 00111 1112346777888899999887654 2 235666554
No 141
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.60 E-value=0.0034 Score=47.01 Aligned_cols=120 Identities=10% Similarity=-0.078 Sum_probs=75.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
..+...+|+.+.+.+|. +..++.++. .-+.++.. +.. +.|+ +|++++.-.+|...+++....+ ++.++
T Consensus 148 l~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~Le~q~kg~g~--~ll~a 225 (281)
T 3lcv_B 148 APWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCLETQQRGSGW--EVIDI 225 (281)
T ss_dssp CTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHHHHHHSTTHHH--HHHHH
T ss_pred HHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHHhhhhhhHHHH--HHHHH
Confidence 34566789999999999 668887765 33344444 554 4443 9999999999999888766666 48889
Q ss_pred CCCCCCCCcchhhhhhhhhhc-CCCc-cCCHHHHHHHHHhCCCeeeEEEecCCcceEE
Q 043665 73 IPSNDEGRKTQLCFDLLMATF-LNGK-EGSVYDWKKLFLAAGFSHYKITPNLGLWSLI 128 (132)
Q Consensus 73 l~~~g~~~~~~~~~dl~m~~~-~~g~-~rt~~e~~~ll~~aGf~~~~~~~~~~~~~~i 128 (132)
|+|++ .-..|+...+.. .-|. +.-..+|++.+.+.|+.+.++.-.+....+|
T Consensus 226 L~~~~----vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~nEl~y~i 279 (281)
T 3lcv_B 226 VNSPN----IVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGNELIYVI 279 (281)
T ss_dssp SSCSE----EEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE
T ss_pred hCCCC----EEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecCeeEEEe
Confidence 99986 011111111100 0011 1224689999999999666655333334443
No 142
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.48 E-value=0.002 Score=46.22 Aligned_cols=70 Identities=9% Similarity=0.082 Sum_probs=53.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccC----C-CceEEEehhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAI----P-PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~----P-~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
+..+++.+|+.+++.+|. |..++.+++ .++|+++. +.+.. + .+|++++.. +.+....+++
T Consensus 86 ~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~~~l~ 160 (232)
T 3ntv_A 86 SMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA-----AKAQSKKFFE 160 (232)
T ss_dssp HHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET-----TSSSHHHHHH
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC-----cHHHHHHHHH
Confidence 456777889999999998 888888775 35899998 55532 2 499998643 3344677999
Q ss_pred HHhhhhCCCCC
Q 043665 67 KKCEESIPSND 77 (132)
Q Consensus 67 ~~~~~al~~~g 77 (132)
++.+.|+|||
T Consensus 161 -~~~~~LkpgG 170 (232)
T 3ntv_A 161 -IYTPLLKHQG 170 (232)
T ss_dssp -HHGGGEEEEE
T ss_pred -HHHHhcCCCe
Confidence 9999999998
No 143
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.48 E-value=0.0043 Score=43.05 Aligned_cols=108 Identities=11% Similarity=-0.020 Sum_probs=71.3
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..+++.+|+.+++.+|. |..++.++. ..++++.. +.+..+ .+|+++...+ ++ ...+++ +++
T Consensus 80 ~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~~-----~~~~l~-~~~ 152 (207)
T 1jsx_A 80 GIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-AS-----LNDMVS-WCH 152 (207)
T ss_dssp HHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-SS-----HHHHHH-HHT
T ss_pred HHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-CC-----HHHHHH-HHH
Confidence 567888899999999998 778887765 23588887 555333 4999997542 22 458999 999
Q ss_pred hhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE----ec-CCcceEEEEE
Q 043665 71 ESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT----PN-LGLWSLIEAY 131 (132)
Q Consensus 71 ~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~----~~-~~~~~~ie~~ 131 (132)
+.|+|||-. .+ ..+ ....+++.++++ ||+..++. +. .+...++.++
T Consensus 153 ~~L~~gG~l-----~~------~~~--~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ 203 (207)
T 1jsx_A 153 HLPGEQGRF-----YA------LKG--QMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIK 203 (207)
T ss_dssp TSEEEEEEE-----EE------EES--SCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEE
T ss_pred HhcCCCcEE-----EE------EeC--CCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEE
Confidence 999998710 00 011 145667777766 99987743 22 3445555543
No 144
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.48 E-value=0.032 Score=40.94 Aligned_cols=111 Identities=5% Similarity=-0.086 Sum_probs=78.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
++.+++..|..+++.+|. |..++.|++ .+||++.. .++.++ .+|++++.++. .+....||. .
T Consensus 36 ~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG----g~lI~~IL~-~ 110 (244)
T 3gnl_A 36 PCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG----GTLIRTILE-E 110 (244)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC----HHHHHHHHH-H
T ss_pred HHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc----hHHHHHHHH-H
Confidence 567888889999999998 778888775 57899988 777544 38999886543 456788999 8
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe---cCCcceEEEEE
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP---NLGLWSLIEAY 131 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~---~~~~~~~ie~~ 131 (132)
..+.|++++. +.+..+ -..+..+++|.+.||.+.+..- -+-..-+|.+.
T Consensus 111 ~~~~L~~~~~-----------lIlq~~---~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 111 GAAKLAGVTK-----------LILQPN---IAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp TGGGGTTCCE-----------EEEEES---SCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHhCCCCE-----------EEEEcC---CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 8888766421 111111 2478999999999999866432 23345666654
No 145
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.43 E-value=0.0021 Score=46.60 Aligned_cols=66 Identities=11% Similarity=0.098 Sum_probs=50.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIP 74 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~ 74 (132)
+..+++++|+.+++.+|. |..++.+++ ..++.+.. +.+ +++ .+|+++...+. ..++ ++++.|+
T Consensus 100 ~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~---------~~l~-~~~~~L~ 169 (269)
T 1p91_A 100 THAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP---------CKAE-ELARVVK 169 (269)
T ss_dssp HHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC---------CCHH-HHHHHEE
T ss_pred HHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh---------hhHH-HHHHhcC
Confidence 567788889999999998 778887776 56788777 433 344 39999976553 2478 8999999
Q ss_pred CCC
Q 043665 75 SND 77 (132)
Q Consensus 75 ~~g 77 (132)
|||
T Consensus 170 pgG 172 (269)
T 1p91_A 170 PGG 172 (269)
T ss_dssp EEE
T ss_pred CCc
Confidence 999
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.43 E-value=0.0056 Score=43.28 Aligned_cols=72 Identities=11% Similarity=0.104 Sum_probs=53.1
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--cc---ccCC------CceEEEehhhhcCCChHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EF---EAIP------PANVVLLKWILHDWSDEES 61 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~---~~~P------~~D~~ll~~vlh~~~de~~ 61 (132)
+..++++.| +.+++.+|+ |..++.+++ .+||+++. .. ...+ .+|++++....|.+.+ .
T Consensus 73 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~--~ 150 (221)
T 3u81_A 73 AVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLP--D 150 (221)
T ss_dssp HHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHH--H
T ss_pred HHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchH--H
Confidence 355667654 889999998 778888775 45899987 32 2232 4999999887776643 4
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
.++++ .+ +.|+|||
T Consensus 151 ~~~~~-~~-~~LkpgG 164 (221)
T 3u81_A 151 TLLLE-KC-GLLRKGT 164 (221)
T ss_dssp HHHHH-HT-TCCCTTC
T ss_pred HHHHH-hc-cccCCCe
Confidence 56788 77 8999998
No 147
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.42 E-value=0.038 Score=38.99 Aligned_cols=116 Identities=12% Similarity=-0.011 Sum_probs=69.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhH----HhhhcCCCCeEEEe--ccc-----cCCC-ceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLW----WIIWWGTNNLEFFL--EFE-----AIPP-ANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v----~~~a~~~~ri~~~~--~~~-----~~P~-~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++..|+-+++.+|+ |.. .+.++...++.++. ..+ ++++ +|++++. +.+ .++...+|+ +
T Consensus 72 ~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~-~~~---~~~~~~~l~-~ 146 (210)
T 1nt2_A 72 VSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD-IAQ---KNQIEILKA-N 146 (210)
T ss_dssp HHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-CCS---TTHHHHHHH-H
T ss_pred HHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-ccC---hhHHHHHHH-H
Confidence 345777778778999998 443 34444456777665 333 2333 9999875 332 234556689 9
Q ss_pred hhhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHH--H--HHHhCCCeeeEEEecC---CcceEEEEEC
Q 043665 69 CEESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWK--K--LFLAAGFSHYKITPNL---GLWSLIEAYP 132 (132)
Q Consensus 69 ~~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~--~--ll~~aGf~~~~~~~~~---~~~~~ie~~p 132 (132)
+++.|+|||-. .......|. ..+.+++. + .++++ |++.+..... ..+.++.+++
T Consensus 147 ~~r~LkpgG~l~i~~~~~~~~~---------~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 147 AEFFLKEKGEVVIMVKARSIDS---------TAEPEEVFKSVLKEMEGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp HHHHEEEEEEEEEEEEHHHHCT---------TSCHHHHHHHHHHHHHTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred HHHHhCCCCEEEEEEecCCccc---------cCCHHHHHHHHHHHHHhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 99999999821 010111111 12334432 2 28888 9998887663 3567776653
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.35 E-value=0.0045 Score=44.61 Aligned_cols=75 Identities=11% Similarity=0.017 Sum_probs=56.3
Q ss_pred HHHHHHH--CCCCeEEEeec-hhHHhhhcC---CC-------C-------------------------eE----------
Q 043665 2 ARAIATA--FPDIKCIVLIC-LLWWIIWWG---TN-------N-------------------------LE---------- 33 (132)
Q Consensus 2 ~~~l~~~--~P~l~~~v~Dl-p~v~~~a~~---~~-------r-------------------------i~---------- 33 (132)
+..+++. +|..+++.+|+ |..++.++. .. + ++
T Consensus 66 ~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 145 (250)
T 1o9g_A 66 LTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGAL 145 (250)
T ss_dssp HHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhhhhhhhcccccccc
Confidence 4556666 78889999999 888888774 22 2 66
Q ss_pred ---EEe--ccccC------C--CceEEEehhhhcCCC-------hHHHHHHHHHHhhhhCCCCC
Q 043665 34 ---FFL--EFEAI------P--PANVVLLKWILHDWS-------DEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 34 ---~~~--~~~~~------P--~~D~~ll~~vlh~~~-------de~~~~iL~~~~~~al~~~g 77 (132)
+.. ++++. + .+|+|++...++... .+....+++ ++++.|+|||
T Consensus 146 ~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~-~~~~~LkpgG 208 (250)
T 1o9g_A 146 PCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR-SLASALPAHA 208 (250)
T ss_dssp CEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH-HHHHHSCTTC
T ss_pred ccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH-HHHHhcCCCc
Confidence 776 66643 3 499999976655443 377789999 9999999998
No 149
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.34 E-value=0.015 Score=43.21 Aligned_cols=73 Identities=12% Similarity=0.003 Sum_probs=54.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC-Cc---eEEEeh------------hhhcC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP-PA---NVVLLK------------WILHD 55 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P-~~---D~~ll~------------~vlh~ 55 (132)
+..+++. |+.+++.+|+ |..++.++. .+|++++. ++++++ .+ |+++.. .+.|
T Consensus 138 ~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPPyi~~~~~l~~~v~~- 215 (284)
T 1nv8_A 138 GVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLF- 215 (284)
T ss_dssp HHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCCCBCGGGSCTTSCCC-
T ss_pred HHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCCCCCcccccChhhcc-
Confidence 4667888 9999999999 888888875 35799998 777655 37 999985 3432
Q ss_pred CCh------HHHHHHHHHHhh-hhCCCCC
Q 043665 56 WSD------EESLRYLKKKCE-ESIPSND 77 (132)
Q Consensus 56 ~~d------e~~~~iL~~~~~-~al~~~g 77 (132)
.+. ++...+++ ++. +.++|||
T Consensus 216 ep~~al~~~~dgl~~~~-~i~~~~l~pgG 243 (284)
T 1nv8_A 216 EPPEALFGGEDGLDFYR-EFFGRYDTSGK 243 (284)
T ss_dssp SCHHHHBCTTTSCHHHH-HHHHHCCCTTC
T ss_pred CcHHHhcCCCcHHHHHH-HHHHhcCCCCC
Confidence 221 22237899 999 9999998
No 150
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.25 E-value=0.019 Score=38.56 Aligned_cols=93 Identities=6% Similarity=-0.072 Sum_probs=62.7
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
..+++ +..+++.+|. |..++.++. .++++++. +.+++| .+|++++..+ +....+++ ++++
T Consensus 51 ~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~------~~~~~~l~-~~~~ 121 (183)
T 2yxd_A 51 VEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT------KNIEKIIE-ILDK 121 (183)
T ss_dssp HHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC------SCHHHHHH-HHHH
T ss_pred HHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc------ccHHHHHH-HHhh
Confidence 34444 8889999998 778887775 26888887 555555 4999999888 23466777 7777
Q ss_pred hCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEE
Q 043665 72 SIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 72 al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
. |||-. .+.. . ...+..++.++++++||.+..+
T Consensus 122 ~--~gG~l-----~~~~-----~--~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 122 K--KINHI-----VANT-----I--VLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp T--TCCEE-----EEEE-----S--CHHHHHHHHHHHHHTTCEEEEE
T ss_pred C--CCCEE-----EEEe-----c--ccccHHHHHHHHHHcCCeEEEE
Confidence 6 77610 0000 0 0112568899999999887655
No 151
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=96.25 E-value=0.0035 Score=47.93 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=53.8
Q ss_pred HHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCC-ChHHHHHHHHHHh
Q 043665 3 RAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDW-SDEESLRYLKKKC 69 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~-~de~~~~iL~~~~ 69 (132)
..++++ +..+++.+|....++.+++ .++|+++. +.+ ++| .+|+++...+.|.+ ..+....+|+ .+
T Consensus 82 ~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~-~~ 159 (349)
T 3q7e_A 82 MFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLH-AR 159 (349)
T ss_dssp HHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHH-HH
T ss_pred HHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHH-HH
Confidence 344544 7779999999877777764 46799998 555 566 39999987765544 2334567888 99
Q ss_pred hhhCCCCC
Q 043665 70 EESIPSND 77 (132)
Q Consensus 70 ~~al~~~g 77 (132)
.+.|+|||
T Consensus 160 ~r~LkpgG 167 (349)
T 3q7e_A 160 DKWLAPDG 167 (349)
T ss_dssp HHHEEEEE
T ss_pred HHhCCCCC
Confidence 99999999
No 152
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.17 E-value=0.0056 Score=43.51 Aligned_cols=70 Identities=10% Similarity=0.141 Sum_probs=54.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--cccc---C--C-CceEEEehhhhcCCChHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEA---I--P-PANVVLLKWILHDWSDEESLRYL 65 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~---~--P-~~D~~ll~~vlh~~~de~~~~iL 65 (132)
+..+++.+|+.+++.+|. |..++.+++ .++++++. +.+. . + .+|++++....+ ....+|
T Consensus 69 ~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-----~~~~~l 143 (233)
T 2gpy_A 69 AIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG-----QYRRFF 143 (233)
T ss_dssp HHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS-----CHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH-----HHHHHH
Confidence 467888999999999999 788887775 35899887 4442 2 3 499999877654 357889
Q ss_pred HHHhhhhCCCCC
Q 043665 66 KKKCEESIPSND 77 (132)
Q Consensus 66 ~~~~~~al~~~g 77 (132)
+ ++.+.|+|||
T Consensus 144 ~-~~~~~L~pgG 154 (233)
T 2gpy_A 144 D-MYSPMVRPGG 154 (233)
T ss_dssp H-HHGGGEEEEE
T ss_pred H-HHHHHcCCCe
Confidence 9 9999999998
No 153
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.11 E-value=0.017 Score=43.42 Aligned_cols=104 Identities=8% Similarity=-0.077 Sum_probs=67.2
Q ss_pred HCCCCeEEEeec-hhHHhh-hcCCCCeEEEe-----ccc--cCC-C-ceEEEehhhhcCCChHHHHHHHHHHhhhhCCCC
Q 043665 8 AFPDIKCIVLIC-LLWWII-WWGTNNLEFFL-----EFE--AIP-P-ANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76 (132)
Q Consensus 8 ~~P~l~~~v~Dl-p~v~~~-a~~~~ri~~~~-----~~~--~~P-~-~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~ 76 (132)
+.+.-+++.+|+ |.+++. .+...|+.... .+. .+| . +|++++...+|++ ..+|+ .+++.|+||
T Consensus 105 ~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl-----~~vL~-e~~rvLkpG 178 (291)
T 3hp7_A 105 QNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL-----NLILP-ALAKILVDG 178 (291)
T ss_dssp HTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG-----GGTHH-HHHHHSCTT
T ss_pred hCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH-----HHHHH-HHHHHcCcC
Confidence 346668999998 667766 34466776554 122 345 3 8999988777755 67899 999999999
Q ss_pred CC-----CCcchhhhhhhhhhcCCCc-------cCCHHHHHHHHHhCCCeeeEEEe
Q 043665 77 DE-----GRKTQLCFDLLMATFLNGK-------EGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 77 g~-----~~~~~~~~dl~m~~~~~g~-------~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
|. .|.+...-. ....+|. .++.+++.++++++||++..+..
T Consensus 179 G~lv~lvkPqfe~~~~---~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 179 GQVVALVKPQFEAGRE---QIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp CEEEEEECGGGTSCGG---GCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEEECcccccChh---hcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 92 111111000 0001233 24678999999999999877654
No 154
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.09 E-value=0.051 Score=39.54 Aligned_cols=118 Identities=8% Similarity=-0.109 Sum_probs=67.9
Q ss_pred HHHHH-CCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc----cC-C-CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 4 AIATA-FPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE----AI-P-PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 4 ~l~~~-~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~----~~-P-~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
.+++. -|+=+++.+|. |..++.+.+ ..++..+. .-+ +. . .+|++++. ++.. ++....++ ++
T Consensus 94 ~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d--~~~~--~~~~~~l~-~~ 168 (233)
T 4df3_A 94 HMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD--VAQP--EQAAIVVR-NA 168 (233)
T ss_dssp HHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC--CCCT--THHHHHHH-HH
T ss_pred HHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe--ccCC--hhHHHHHH-HH
Confidence 44444 48888999998 777776654 45677665 222 11 2 38987742 2222 23567889 99
Q ss_pred hhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCC---cceEEEEE
Q 043665 70 EESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG---LWSLIEAY 131 (132)
Q Consensus 70 ~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~---~~~~ie~~ 131 (132)
+..|+|||-. .......|.. .......++-.+.|+++||++.+...+.. .+.++-++
T Consensus 169 ~r~LKpGG~lvI~ik~r~~d~~-----~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 169 RFFLRDGGYMLMAIKARSIDVT-----TEPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp HHHEEEEEEEEEEEECCHHHHH-----TCCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred HHhccCCCEEEEEEecccCCCC-----CChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 9999999820 0000011110 00001123446678999999988877654 35555544
No 155
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.09 E-value=0.0068 Score=41.77 Aligned_cols=75 Identities=11% Similarity=0.016 Sum_probs=53.8
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cCC-CceEEEehhhhc-------CCChH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AIP-PANVVLLKWILH-------DWSDE 59 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh-------~~~de 59 (132)
+..+++++ |..+++.+|. |..++.+++ .++++++. +.+ ..+ .+|++++...+. ....+
T Consensus 37 ~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~ 116 (197)
T 3eey_A 37 TAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPE 116 (197)
T ss_dssp HHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHH
T ss_pred HHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcc
Confidence 34566665 7789999998 778887765 26899988 433 223 399999876441 12334
Q ss_pred HHHHHHHHHhhhhCCCCC
Q 043665 60 ESLRYLKKKCEESIPSND 77 (132)
Q Consensus 60 ~~~~iL~~~~~~al~~~g 77 (132)
...++++ ++.+.|+|||
T Consensus 117 ~~~~~l~-~~~~~Lk~gG 133 (197)
T 3eey_A 117 TTIQALS-KAMELLVTGG 133 (197)
T ss_dssp HHHHHHH-HHHHHEEEEE
T ss_pred cHHHHHH-HHHHhCcCCC
Confidence 5677999 9999999997
No 156
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.01 E-value=0.0044 Score=46.51 Aligned_cols=75 Identities=5% Similarity=-0.005 Sum_probs=49.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----------CCCeEEEe--cccc---CC-CceEEEehhhhcCCChHHH--
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----------TNNLEFFL--EFEA---IP-PANVVLLKWILHDWSDEES-- 61 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~--~~~~---~P-~~D~~ll~~vlh~~~de~~-- 61 (132)
+..+++..|..+++.+|+ |.+++.+++ .+|++++. .++. .+ .+|+|+..-.-+.-+++..
T Consensus 98 ~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~ 177 (294)
T 3adn_A 98 LREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFT 177 (294)
T ss_dssp HHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----------CC
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccH
Confidence 456777667788999998 788888764 35888886 4442 22 4999998433322222221
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
..+++ .++++|+|||
T Consensus 178 ~~f~~-~~~~~LkpgG 192 (294)
T 3adn_A 178 SAFYE-GCKRCLNPGG 192 (294)
T ss_dssp HHHHH-HHHHTEEEEE
T ss_pred HHHHH-HHHHhcCCCC
Confidence 67999 9999999998
No 157
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.00 E-value=0.0093 Score=42.63 Aligned_cols=70 Identities=7% Similarity=-0.009 Sum_probs=51.9
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------C-CCeEEEe--ccc---cC-C-CceEEEehhhhcCCChHHHHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------T-NNLEFFL--EFE---AI-P-PANVVLLKWILHDWSDEESLRY 64 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~-~ri~~~~--~~~---~~-P-~~D~~ll~~vlh~~~de~~~~i 64 (132)
+..++++.| +.+++.+|. |..++.+++ . +||+++. ..+ .+ + .+|++++.. +......+
T Consensus 71 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~-----~~~~~~~~ 145 (221)
T 3dr5_A 71 GLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV-----SPMDLKAL 145 (221)
T ss_dssp HHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC-----CTTTHHHH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC-----cHHHHHHH
Confidence 456777775 889999998 777887765 3 6899987 333 34 3 499998753 33345678
Q ss_pred HHHHhhhhCCCCC
Q 043665 65 LKKKCEESIPSND 77 (132)
Q Consensus 65 L~~~~~~al~~~g 77 (132)
++ .+.+.|+|||
T Consensus 146 l~-~~~~~LkpGG 157 (221)
T 3dr5_A 146 VD-AAWPLLRRGG 157 (221)
T ss_dssp HH-HHHHHEEEEE
T ss_pred HH-HHHHHcCCCc
Confidence 99 9999999998
No 158
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.96 E-value=0.0039 Score=46.31 Aligned_cols=75 Identities=8% Similarity=-0.024 Sum_probs=53.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---cCC-CceEEEehhhhcCCChHHH--H
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---AIP-PANVVLLKWILHDWSDEES--L 62 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~~de~~--~ 62 (132)
+..+++..|..+++++|+ |.+++.+++ .+|++++. ..+ ..+ .+|+|++....+.-+.+.. .
T Consensus 93 ~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~ 172 (283)
T 2i7c_A 93 IRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQ 172 (283)
T ss_dssp HHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSH
T ss_pred HHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHH
Confidence 456666667889999999 888887764 36888887 433 224 4999998543332222222 6
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
++++ +++++|+|||
T Consensus 173 ~~l~-~~~~~L~pgG 186 (283)
T 2i7c_A 173 NFYE-KIYNALKPNG 186 (283)
T ss_dssp HHHH-HHHHHEEEEE
T ss_pred HHHH-HHHHhcCCCc
Confidence 8999 9999999998
No 159
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=95.93 E-value=0.0079 Score=43.92 Aligned_cols=104 Identities=12% Similarity=0.025 Sum_probs=64.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC---C-------CCeEEEe--cccc--------CC--CceEEEehhhh-----
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG---T-------NNLEFFL--EFEA--------IP--PANVVLLKWIL----- 53 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~---~-------~ri~~~~--~~~~--------~P--~~D~~ll~~vl----- 53 (132)
+..+++++|+.+++.+|+ |..++.++. . +|++++. +.+. ++ .+|+|++.--.
T Consensus 51 ~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~ 130 (260)
T 2ozv_A 51 GMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGD 130 (260)
T ss_dssp HHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC-----
T ss_pred HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCC
Confidence 456888999999999999 778887764 2 3688887 5443 33 39999996222
Q ss_pred -----------cCCChHHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 54 -----------HDWSDEESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 54 -----------h~~~de~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
+....+....+++ .+.+.|+|||-. .+ . ... ....++.+++++. |...++.+
T Consensus 131 ~~~~~~~~~~a~~~~~~~~~~~l~-~~~~~LkpgG~l-----~~-----~-~~~--~~~~~~~~~l~~~-~~~~~i~~ 193 (260)
T 2ozv_A 131 RRTPDALKAEAHAMTEGLFEDWIR-TASAIMVSGGQL-----SL-----I-SRP--QSVAEIIAACGSR-FGGLEITL 193 (260)
T ss_dssp ----------------CCHHHHHH-HHHHHEEEEEEE-----EE-----E-ECG--GGHHHHHHHHTTT-EEEEEEEE
T ss_pred CCCcCHHHHHHhhcCcCCHHHHHH-HHHHHcCCCCEE-----EE-----E-EcH--HHHHHHHHHHHhc-CCceEEEE
Confidence 2222233567889 999999998720 00 0 011 1245667777664 76655544
No 160
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=95.92 E-value=0.027 Score=40.17 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=52.2
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--cccc---C-----------------CCceEEEeh
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEA---I-----------------PPANVVLLK 50 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~---~-----------------P~~D~~ll~ 50 (132)
+..+++.+| ..+++.+|. |..++.+++ .++++++. ..+. + ..+|++++.
T Consensus 75 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~ 154 (239)
T 2hnk_A 75 SLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLD 154 (239)
T ss_dssp HHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEEC
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEe
Confidence 456788888 789999998 778887765 25688887 3331 1 349999876
Q ss_pred hhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 51 WILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 51 ~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
. ..+....+++ ++.+.|+|||
T Consensus 155 ~-----~~~~~~~~l~-~~~~~L~pgG 175 (239)
T 2hnk_A 155 A-----DKENYPNYYP-LILKLLKPGG 175 (239)
T ss_dssp S-----CGGGHHHHHH-HHHHHEEEEE
T ss_pred C-----CHHHHHHHHH-HHHHHcCCCe
Confidence 3 3445568899 9999999998
No 161
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.85 E-value=0.067 Score=39.34 Aligned_cols=107 Identities=9% Similarity=-0.095 Sum_probs=65.8
Q ss_pred HHHHHHCCCCeEEEeec--hhHHhhhcC-C---------------CCeEEEe--c---cccC-----C-CceEEEehhhh
Q 043665 3 RAIATAFPDIKCIVLIC--LLWWIIWWG-T---------------NNLEFFL--E---FEAI-----P-PANVVLLKWIL 53 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl--p~v~~~a~~-~---------------~ri~~~~--~---~~~~-----P-~~D~~ll~~vl 53 (132)
..+++ ....+++.+|+ |..++.++. . +++++.. . .+.+ + .+|+|++..++
T Consensus 95 ~~~a~-~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl 173 (281)
T 3bzb_A 95 IVAFL-AGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLL 173 (281)
T ss_dssp HHHHH-TTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCC
T ss_pred HHHHH-cCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcc
Confidence 33444 34458999999 678877654 1 3677774 2 1112 2 49999999999
Q ss_pred cCCChHHHHHHHHHHhhhhCC---C--CCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCC-CeeeEEEe
Q 043665 54 HDWSDEESLRYLKKKCEESIP---S--NDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAG-FSHYKITP 120 (132)
Q Consensus 54 h~~~de~~~~iL~~~~~~al~---~--~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aG-f~~~~~~~ 120 (132)
|+.++ ...+++ .+.+.|+ | ||-. ...++.. ......+..++.+.++++| |++.++..
T Consensus 174 ~~~~~--~~~ll~-~l~~~Lk~~~p~~gG~l---~v~~~~~----~~~~~~~~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 174 SFHQA--HDALLR-SVKMLLALPANDPTAVA---LVTFTHH----RPHLAERDLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp SCGGG--HHHHHH-HHHHHBCCTTTCTTCEE---EEEECC------------CTHHHHHHHHSTTEEEEEEEC
T ss_pred cChHH--HHHHHH-HHHHHhcccCCCCCCEE---EEEEEee----ecccchhHHHHHHHHHhcCCEEEEEecc
Confidence 88544 678899 9999999 8 7610 0000000 0000122357777889999 99887743
No 162
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=95.83 E-value=0.025 Score=39.91 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=51.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-c--CC--CceEEEehhhhcCCChHH-------
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-A--IP--PANVVLLKWILHDWSDEE------- 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~--~P--~~D~~ll~~vlh~~~de~------- 60 (132)
+..+++.+|+.+++.+|. +..++.+++ .++++++. ..+ + ++ .+|.+++.... .|....
T Consensus 53 ~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~-p~~~~~~~~~rl~ 131 (213)
T 2fca_A 53 ISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD-PWPKKRHEKRRLT 131 (213)
T ss_dssp HHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC-CCCSGGGGGGSTT
T ss_pred HHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCC-CCcCccccccccC
Confidence 567889999999999998 778877764 35788887 433 1 44 38887763221 232211
Q ss_pred HHHHHHHHhhhhCCCCC
Q 043665 61 SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g 77 (132)
...+|+ .+++.|+|||
T Consensus 132 ~~~~l~-~~~~~LkpgG 147 (213)
T 2fca_A 132 YSHFLK-KYEEVMGKGG 147 (213)
T ss_dssp SHHHHH-HHHHHHTTSC
T ss_pred cHHHHH-HHHHHcCCCC
Confidence 257899 9999999998
No 163
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.83 E-value=0.057 Score=39.70 Aligned_cols=100 Identities=11% Similarity=0.040 Sum_probs=67.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccC-C-CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAI-P-PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~-P-~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++..+. +++.+|+ |..++.+++ .++++++. .++.. + .+|++++.. + .....+++ .+
T Consensus 140 ~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~-----p-~~~~~~l~-~~ 211 (278)
T 2frn_A 140 SLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGY-----V-VRTHEFIP-KA 211 (278)
T ss_dssp HHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECC-----C-SSGGGGHH-HH
T ss_pred HHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECC-----c-hhHHHHHH-HH
Confidence 4567777777 8999998 778887764 45788887 65533 3 399998842 2 22367888 89
Q ss_pred hhhCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeE
Q 043665 70 EESIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 70 ~~al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
.+.|+|||-. ..... + ........+++.+.++++||+...
T Consensus 212 ~~~LkpgG~l~~~~~~~--~------~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 212 LSIAKDGAIIHYHNTVP--E------KLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHHEEEEEEEEEEEEEE--G------GGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHCCCCeEEEEEEeec--c------ccccccHHHHHHHHHHHcCCeeEE
Confidence 9999999720 00000 0 001135678899999999999766
No 164
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=95.82 E-value=0.017 Score=39.35 Aligned_cols=111 Identities=12% Similarity=0.012 Sum_probs=65.6
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe-ccc---cC-CC-ceEEEeh-hhhcC----C--ChHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL-EFE---AI-PP-ANVVLLK-WILHD----W--SDEESL 62 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~-~~~---~~-P~-~D~~ll~-~vlh~----~--~de~~~ 62 (132)
..++++ ..+++.+|+ |..++.+++ .++++++. -.+ .. ++ +|++++. ..++. + ..+...
T Consensus 38 ~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~ 115 (185)
T 3mti_A 38 AFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTL 115 (185)
T ss_dssp HHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHH
T ss_pred HHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHH
Confidence 445554 788999998 778888875 37899887 322 23 33 9999876 33332 0 235667
Q ss_pred HHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCc--cCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 63 RYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGK--EGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 63 ~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~--~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
..|+ ++.+.|+|||-.--. .+ ....+|. .....+|.+.+...+|.+.+.....
T Consensus 116 ~~l~-~~~~~LkpgG~l~i~--~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 116 EAIE-KILDRLEVGGRLAIM--IY----YGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp HHHH-HHHHHEEEEEEEEEE--EC----------CHHHHHHHHHHHHSCTTTEEEEEEEESS
T ss_pred HHHH-HHHHhcCCCcEEEEE--Ee----CCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc
Confidence 8899 999999999820000 00 0000111 1223456666667789988876653
No 165
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.81 E-value=0.0081 Score=41.98 Aligned_cols=70 Identities=7% Similarity=0.023 Sum_probs=52.0
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--cccc---CCCceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEA---IPPANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~---~P~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++.+| +.+++.+|. |..++.+++ .++++++. ..+. .+++|++++.. +.+....+++
T Consensus 71 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-----~~~~~~~~l~- 144 (210)
T 3c3p_A 71 SWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC-----DVFNGADVLE- 144 (210)
T ss_dssp HHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET-----TTSCHHHHHH-
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC-----ChhhhHHHHH-
Confidence 456778888 889999998 778887774 35899887 4332 22389998752 2334578999
Q ss_pred HhhhhCCCCC
Q 043665 68 KCEESIPSND 77 (132)
Q Consensus 68 ~~~~al~~~g 77 (132)
++.+.|+|||
T Consensus 145 ~~~~~LkpgG 154 (210)
T 3c3p_A 145 RMNRCLAKNA 154 (210)
T ss_dssp HHGGGEEEEE
T ss_pred HHHHhcCCCe
Confidence 9999999998
No 166
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.76 E-value=0.011 Score=41.21 Aligned_cols=67 Identities=7% Similarity=-0.127 Sum_probs=50.5
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++.. |+.+++.+|. |..++.+++ .+++++.. +.++.+ .+|++++..++|.++ + +
T Consensus 92 ~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~--------~-~ 162 (215)
T 2yxe_A 92 AAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP--------E-P 162 (215)
T ss_dssp HHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC--------H-H
T ss_pred HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHH--------H-H
Confidence 34566666 7789999998 778887765 35788887 544443 499999999999887 3 5
Q ss_pred hhhhCCCCC
Q 043665 69 CEESIPSND 77 (132)
Q Consensus 69 ~~~al~~~g 77 (132)
+.+.|+|||
T Consensus 163 ~~~~L~pgG 171 (215)
T 2yxe_A 163 LIRQLKDGG 171 (215)
T ss_dssp HHHTEEEEE
T ss_pred HHHHcCCCc
Confidence 666888988
No 167
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=95.71 E-value=0.0094 Score=45.07 Aligned_cols=72 Identities=7% Similarity=0.009 Sum_probs=52.0
Q ss_pred HHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCC-hHHHHHHHHHHhh
Q 043665 4 AIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWS-DEESLRYLKKKCE 70 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~-de~~~~iL~~~~~ 70 (132)
.+++ .+..+++.+|....++.+++ .++|+++. +.+ ++| .+|+++...+.|.+. .+....+|+ .+.
T Consensus 55 ~la~-~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~-~~~ 132 (328)
T 1g6q_1 55 FAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLY-ARD 132 (328)
T ss_dssp HHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHH-HHH
T ss_pred HHHH-CCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHH-HHH
Confidence 3444 46678999999877777664 46899988 554 455 399999876555442 233457888 999
Q ss_pred hhCCCCC
Q 043665 71 ESIPSND 77 (132)
Q Consensus 71 ~al~~~g 77 (132)
+.|+|||
T Consensus 133 ~~LkpgG 139 (328)
T 1g6q_1 133 HYLVEGG 139 (328)
T ss_dssp HHEEEEE
T ss_pred hhcCCCe
Confidence 9999999
No 168
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.69 E-value=0.0075 Score=42.43 Aligned_cols=70 Identities=11% Similarity=0.066 Sum_probs=52.6
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC------CCceEEEehhhhcCCChHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI------PPANVVLLKWILHDWSDEES 61 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~------P~~D~~ll~~vlh~~~de~~ 61 (132)
+..+++.+| +.+++.+|. |..++.+++ .++++++. ..+ .. ..+|++++.. +.+..
T Consensus 79 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~-----~~~~~ 153 (225)
T 3tr6_A 79 AIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA-----DKANT 153 (225)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS-----CGGGH
T ss_pred HHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECC-----CHHHH
Confidence 456788888 899999999 778887765 46799887 333 12 3499998533 34556
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
..+++ ++.+.|+|||
T Consensus 154 ~~~l~-~~~~~L~pgG 168 (225)
T 3tr6_A 154 DLYYE-ESLKLLREGG 168 (225)
T ss_dssp HHHHH-HHHHHEEEEE
T ss_pred HHHHH-HHHHhcCCCc
Confidence 78999 9999999998
No 169
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.61 E-value=0.0048 Score=44.69 Aligned_cols=112 Identities=8% Similarity=-0.024 Sum_probs=69.3
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCC
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSN 76 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~ 76 (132)
.++++ +.+++.+|. |..++.+++ .... ++. +.+ +++ .+|++++.++++.+.++ ...+|+ ++++.|+||
T Consensus 71 ~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~~~~l~-~~~~~Lkpg 145 (260)
T 2avn_A 71 FLQER--GFEVVLVDPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVEN-KDKAFS-EIRRVLVPD 145 (260)
T ss_dssp HHHTT--TCEEEEEESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCSC-HHHHHH-HHHHHEEEE
T ss_pred HHHHc--CCeEEEEeCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhcccc-HHHHHH-HHHHHcCCC
Confidence 44443 568999998 778888776 2222 444 443 444 39999998866666433 788999 999999999
Q ss_pred CC------CCc---c----hhhhhhhhhhcCCC-------------ccCCHHHHHHHHHhCCCeeeEEEecCC
Q 043665 77 DE------GRK---T----QLCFDLLMATFLNG-------------KEGSVYDWKKLFLAAGFSHYKITPNLG 123 (132)
Q Consensus 77 g~------~~~---~----~~~~dl~m~~~~~g-------------~~rt~~e~~~ll~~aGf~~~~~~~~~~ 123 (132)
|- ... . ...++........| ..+|.+|+.++ +||+++++....+
T Consensus 146 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---aGf~~~~~~~~~~ 215 (260)
T 2avn_A 146 GLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL---EGFETVDIRGIGV 215 (260)
T ss_dssp EEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---TTEEEEEEEEECS
T ss_pred eEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---cCceEEEEECCCC
Confidence 91 110 0 00111000000001 14688888888 9999998876543
No 170
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.60 E-value=0.0043 Score=45.96 Aligned_cols=75 Identities=7% Similarity=-0.061 Sum_probs=52.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---cCC-CceEEEehhhhcCCChHH--HH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---AIP-PANVVLLKWILHDWSDEE--SL 62 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~~de~--~~ 62 (132)
+..+++.+|..+++++|+ |.+++.+++ .+|++++. .++ ..+ .+|+|++.-.-+..+.+. ..
T Consensus 90 ~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~ 169 (275)
T 1iy9_A 90 IREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTK 169 (275)
T ss_dssp HHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTT
T ss_pred HHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHH
Confidence 455666557789999999 888888764 36899887 443 223 499999843333222111 26
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
++++ .+++.|+|||
T Consensus 170 ~~~~-~~~~~L~pgG 183 (275)
T 1iy9_A 170 GFYA-GIAKALKEDG 183 (275)
T ss_dssp HHHH-HHHHHEEEEE
T ss_pred HHHH-HHHHhcCCCc
Confidence 7899 9999999997
No 171
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.58 E-value=0.02 Score=41.56 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=52.4
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC------C-CceEEEehhhhcCCChHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI------P-PANVVLLKWILHDWSDEE 60 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~------P-~~D~~ll~~vlh~~~de~ 60 (132)
+..+++..| +.+++.+|. |..++.+++ .+||+++. ..+ .+ + .+|++++... .+.
T Consensus 94 ~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~-----~~~ 168 (247)
T 1sui_A 94 LLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD-----KDN 168 (247)
T ss_dssp HHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC-----STT
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc-----hHH
Confidence 456788888 789999998 778887765 35899886 332 22 3 4999987532 334
Q ss_pred HHHHHHHHhhhhCCCCC
Q 043665 61 SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g 77 (132)
...+++ .+.+.|+|||
T Consensus 169 ~~~~l~-~~~~~LkpGG 184 (247)
T 1sui_A 169 YLNYHK-RLIDLVKVGG 184 (247)
T ss_dssp HHHHHH-HHHHHBCTTC
T ss_pred HHHHHH-HHHHhCCCCe
Confidence 678999 9999999998
No 172
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.57 E-value=0.011 Score=45.67 Aligned_cols=73 Identities=11% Similarity=-0.015 Sum_probs=53.5
Q ss_pred HHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCC-CceEEEehhhhcCCChH-HHHHHHHHHhh
Q 043665 3 RAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIP-PANVVLLKWILHDWSDE-ESLRYLKKKCE 70 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~~~de-~~~~iL~~~~~ 70 (132)
..++++ ...+++.+|....++.+++ .++|+++. +.+ +.| .+|+++...+.|....+ ....+|+ .+.
T Consensus 79 ~~la~~-g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~~l~~e~~~~~~l~-~~~ 156 (376)
T 3r0q_C 79 IWSAQA-GARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVIS-ARD 156 (376)
T ss_dssp HHHHHT-TCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBTTBTTTCTHHHHHH-HHH
T ss_pred HHHHhc-CCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhhcccchHHHHHHHH-HHH
Confidence 344544 4458999999877777765 47799998 554 455 49999997766665433 3566888 999
Q ss_pred hhCCCCC
Q 043665 71 ESIPSND 77 (132)
Q Consensus 71 ~al~~~g 77 (132)
+.|+|||
T Consensus 157 ~~LkpgG 163 (376)
T 3r0q_C 157 RWLKPTG 163 (376)
T ss_dssp HHEEEEE
T ss_pred hhCCCCe
Confidence 9999999
No 173
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=95.56 E-value=0.015 Score=41.93 Aligned_cols=107 Identities=11% Similarity=-0.055 Sum_probs=60.2
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe-----cc--ccCCC--ceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL-----EF--EAIPP--ANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~-----~~--~~~P~--~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
.+++. ...+++.+|+ |..++.+.. ..|+.... +. +.++. +|...+.-++..+ ..+|+ .+++.
T Consensus 54 ~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l-----~~~l~-~i~rv 126 (232)
T 3opn_A 54 VMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL-----DLILP-PLYEI 126 (232)
T ss_dssp HHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG-----GGTHH-HHHHH
T ss_pred HHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH-----HHHHH-HHHHh
Confidence 44444 3348999998 667776554 45554433 11 12221 2333333333333 67899 99999
Q ss_pred CCCCCC-----CCcchhhhhhhhhhcCCC-------ccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 73 IPSNDE-----GRKTQLCFDLLMATFLNG-------KEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 73 l~~~g~-----~~~~~~~~dl~m~~~~~g-------~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
|+|||. .+....... ....+| ..++.+++.++++++||++..+..
T Consensus 127 LkpgG~lv~~~~p~~e~~~~---~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 127 LEKNGEVAALIKPQFEAGRE---QVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp SCTTCEEEEEECHHHHSCHH---HHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred ccCCCEEEEEECcccccCHH---HhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 999992 111111000 000111 124778999999999999987754
No 174
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=95.51 E-value=0.017 Score=43.98 Aligned_cols=73 Identities=10% Similarity=-0.014 Sum_probs=52.1
Q ss_pred HHHHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCC-ChHHHHHHHHHHh
Q 043665 3 RAIATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDW-SDEESLRYLKKKC 69 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~-~de~~~~iL~~~~ 69 (132)
..+++ .+..+++.+|...+++.+++ .++++++. +.+ ++| .+|+++...+.+.+ ..+....+|+ .+
T Consensus 80 ~~la~-~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~-~~ 157 (340)
T 2fyt_A 80 MFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLY-AK 157 (340)
T ss_dssp HHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHH-HH
T ss_pred HHHHH-cCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHH-HH
Confidence 34444 45668999999777777765 37899988 554 555 39999987643332 2334567899 99
Q ss_pred hhhCCCCC
Q 043665 70 EESIPSND 77 (132)
Q Consensus 70 ~~al~~~g 77 (132)
.+.|+|||
T Consensus 158 ~~~LkpgG 165 (340)
T 2fyt_A 158 NKYLAKGG 165 (340)
T ss_dssp HHHEEEEE
T ss_pred HhhcCCCc
Confidence 99999999
No 175
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.49 E-value=0.012 Score=42.24 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=53.1
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC------C-CceEEEehhhhcCCChHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI------P-PANVVLLKWILHDWSDEE 60 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~------P-~~D~~ll~~vlh~~~de~ 60 (132)
+..+++..| +.+++.+|. |..++.+++ .+||+++. .++ .+ + .+|++++. .+...
T Consensus 85 ~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d-----~~~~~ 159 (237)
T 3c3y_A 85 LLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVD-----ADKPN 159 (237)
T ss_dssp HHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEEC-----SCGGG
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEEC-----CchHH
Confidence 456788888 789999999 778887765 35899886 332 22 3 49999874 34455
Q ss_pred HHHHHHHHhhhhCCCCC
Q 043665 61 SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g 77 (132)
...+++ ++.+.|+|||
T Consensus 160 ~~~~l~-~~~~~L~pGG 175 (237)
T 3c3y_A 160 YIKYHE-RLMKLVKVGG 175 (237)
T ss_dssp HHHHHH-HHHHHEEEEE
T ss_pred HHHHHH-HHHHhcCCCe
Confidence 688999 9999999998
No 176
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.43 E-value=0.01 Score=43.91 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=50.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------------CCCeEEEe--ccccC--C-CceEEEehhhhcCCChH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------------TNNLEFFL--EFEAI--P-PANVVLLKWILHDWSDE 59 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------------~~ri~~~~--~~~~~--P-~~D~~ll~~vlh~~~de 59 (132)
+..+++. |..+++.+|+ |.+++.+++ .+|++++. .++.+ + .+|+|++....|..+.+
T Consensus 90 ~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD~Ii~d~~~~~~~~~ 168 (281)
T 1mjf_A 90 VREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFDVIIADSTDPVGPAK 168 (281)
T ss_dssp HHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEEEEEEECCCCC----
T ss_pred HHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCeeEEEECCCCCCCcch
Confidence 4556665 8889999999 788887653 35788886 33311 4 49999985443322222
Q ss_pred H--HHHHHHHHhhhhCCCCC
Q 043665 60 E--SLRYLKKKCEESIPSND 77 (132)
Q Consensus 60 ~--~~~iL~~~~~~al~~~g 77 (132)
. ...+++ ++++.|+|||
T Consensus 169 ~l~~~~~l~-~~~~~L~pgG 187 (281)
T 1mjf_A 169 VLFSEEFYR-YVYDALNNPG 187 (281)
T ss_dssp -TTSHHHHH-HHHHHEEEEE
T ss_pred hhhHHHHHH-HHHHhcCCCc
Confidence 2 367899 9999999998
No 177
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=95.40 E-value=0.012 Score=42.02 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=51.9
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc----cCC--CceEEEehhhhcCCChHHH-----
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE----AIP--PANVVLLKWILHDWSDEES----- 61 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~----~~P--~~D~~ll~~vlh~~~de~~----- 61 (132)
+..+++++|+.+++.+|. |..++.++. ..+++++. ..+ .+| .+|.+++.... -|+....
T Consensus 49 ~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~-p~~~~~~~~rr~ 127 (218)
T 3dxy_A 49 LVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPD-PWHKARHNKRRI 127 (218)
T ss_dssp HHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCC-CCCSGGGGGGSS
T ss_pred HHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCC-Cccchhhhhhhh
Confidence 567889999999999998 677777654 35788887 322 244 38988875322 2332221
Q ss_pred --HHHHHHHhhhhCCCCC
Q 043665 62 --LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 --~~iL~~~~~~al~~~g 77 (132)
..+++ .+++.|+|||
T Consensus 128 ~~~~~l~-~~~r~LkpGG 144 (218)
T 3dxy_A 128 VQVPFAE-LVKSKLQLGG 144 (218)
T ss_dssp CSHHHHH-HHHHHEEEEE
T ss_pred hhHHHHH-HHHHHcCCCc
Confidence 24899 9999999999
No 178
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.40 E-value=0.0073 Score=45.73 Aligned_cols=75 Identities=12% Similarity=0.044 Sum_probs=49.0
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---cCC-CceEEEehhhhcCCChHH--HH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---AIP-PANVVLLKWILHDWSDEE--SL 62 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~~de~--~~ 62 (132)
+..+++..|..+++.+|+ |.+++.+++ .+|++++. .++ ..+ .+|+|++...-|.-+++. ..
T Consensus 123 ~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~ 202 (314)
T 2b2c_A 123 LREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQ 202 (314)
T ss_dssp HHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC------------
T ss_pred HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHH
Confidence 456777678899999999 888887764 35888887 443 223 499999844322212222 16
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
.+++ ++++.|+|||
T Consensus 203 ~~l~-~~~~~LkpgG 216 (314)
T 2b2c_A 203 SYYE-LLRDALKEDG 216 (314)
T ss_dssp -HHH-HHHHHEEEEE
T ss_pred HHHH-HHHhhcCCCe
Confidence 8999 9999999998
No 179
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.36 E-value=0.026 Score=40.81 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC------CCceEEEehhhhcCCChHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI------PPANVVLLKWILHDWSDEES 61 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~------P~~D~~ll~~vlh~~~de~~ 61 (132)
+..+++..| +.+++.+|. |..++.+++ .+||+++. ..+ .. ..+|++++... .+..
T Consensus 75 t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~-----~~~~ 149 (242)
T 3r3h_A 75 ALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD-----KTNY 149 (242)
T ss_dssp HHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC-----GGGH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC-----hHHh
Confidence 456778786 889999998 667776654 46899987 433 22 34999987542 4446
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
..+|+ ++.+.|+|||
T Consensus 150 ~~~l~-~~~~~LkpGG 164 (242)
T 3r3h_A 150 LNYYE-LALKLVTPKG 164 (242)
T ss_dssp HHHHH-HHHHHEEEEE
T ss_pred HHHHH-HHHHhcCCCe
Confidence 77899 9999999998
No 180
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.29 E-value=0.0098 Score=45.05 Aligned_cols=74 Identities=8% Similarity=0.029 Sum_probs=52.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--cccc---CC-CceEEEehhhhcCCC-hHH--H
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFEA---IP-PANVVLLKWILHDWS-DEE--S 61 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~~---~P-~~D~~ll~~vlh~~~-de~--~ 61 (132)
+..+++..|..+++.+|+ |.+++.+++ .+|++++. .++. .+ .+|+|++... +.+. .+. .
T Consensus 131 ~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~-~p~~~~~~l~~ 209 (321)
T 2pt6_A 131 IRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS-DPIGPAETLFN 209 (321)
T ss_dssp HHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC-CSSSGGGGGSS
T ss_pred HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc-CCCCcchhhhH
Confidence 456676668899999999 888887764 35888887 4432 23 4999998532 2222 222 2
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
.++++ ++++.|+|||
T Consensus 210 ~~~l~-~~~~~LkpgG 224 (321)
T 2pt6_A 210 QNFYE-KIYNALKPNG 224 (321)
T ss_dssp HHHHH-HHHHHEEEEE
T ss_pred HHHHH-HHHHhcCCCc
Confidence 68999 9999999997
No 181
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.28 E-value=0.077 Score=40.47 Aligned_cols=111 Identities=11% Similarity=0.041 Sum_probs=75.2
Q ss_pred HHHHHHCCCCeEEEeechhHHhhhcC---------------------------CCCeEEEe--ccc-c--------C--C
Q 043665 3 RAIATAFPDIKCIVLICLLWWIIWWG---------------------------TNNLEFFL--EFE-A--------I--P 42 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dlp~v~~~a~~---------------------------~~ri~~~~--~~~-~--------~--P 42 (132)
.+|...+|+++..=+|+|.+++.-++ .+|+.+++ +.+ . . |
T Consensus 113 ~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~ 192 (334)
T 1rjd_A 113 LPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKR 192 (334)
T ss_dssp HHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCT
T ss_pred HHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCCCcHHHHHHHHhcCCC
Confidence 35666678999999999999885432 26899998 554 1 1 2
Q ss_pred C-ceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC----C--CC-cchhhhhhhhhh--------c-CC-CccCCHHHH
Q 043665 43 P-ANVVLLKWILHDWSDEESLRYLKKKCEESIPSND----E--GR-KTQLCFDLLMAT--------F-LN-GKEGSVYDW 104 (132)
Q Consensus 43 ~-~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g----~--~~-~~~~~~dl~m~~--------~-~~-g~~rt~~e~ 104 (132)
. ..+++.-.+|++++.+++..+|+ .+.+..+++. + .+ .....+.-.|.. . .+ ....|.++.
T Consensus 193 ~~Ptl~iaEgvL~YL~~~~~~~ll~-~ia~~~~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~rg~~l~~~~~y~s~~~~ 271 (334)
T 1rjd_A 193 EIPTIVISECLLCYMHNNESQLLIN-TIMSKFSHGLWISYDPIGGSQPNDRFGAIMQSNLKESRNLEMPTLMTYNSKEKY 271 (334)
T ss_dssp TSCEEEEEESCGGGSCHHHHHHHHH-HHHHHCSSEEEEEEEECCCCSTTCCHHHHHHHHHHHHHCCCCTTTTTTCSHHHH
T ss_pred CCCEEEEEcchhhCCCHHHHHHHHH-HHHhhCCCcEEEEEeccCCCCCcchHHHHHHHHhhcccCCcccccccCCCHHHH
Confidence 2 57888899999999999999999 9998774332 1 11 001111111211 0 11 234689999
Q ss_pred HHHHHhCCCe
Q 043665 105 KKLFLAAGFS 114 (132)
Q Consensus 105 ~~ll~~aGf~ 114 (132)
.+.|.++||+
T Consensus 272 ~~rl~~~Gf~ 281 (334)
T 1rjd_A 272 ASRWSAAPNV 281 (334)
T ss_dssp HGGGTTSSEE
T ss_pred HHHHHHCCCC
Confidence 9999999997
No 182
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=95.27 E-value=0.07 Score=40.29 Aligned_cols=105 Identities=8% Similarity=-0.170 Sum_probs=71.4
Q ss_pred CCeEEEeechhHHhhhcC---------CCCeEEEe--ccccC----------CC-ceEEEehhhhcCCChHHHHHHHHHH
Q 043665 11 DIKCIVLICLLWWIIWWG---------TNNLEFFL--EFEAI----------PP-ANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 11 ~l~~~v~Dlp~v~~~a~~---------~~ri~~~~--~~~~~----------P~-~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
++++.-+|+|.|++..++ .++..+++ +.+.+ +. --++++-.+||++++++...+++ .
T Consensus 125 ~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~-~ 203 (310)
T 2uyo_A 125 GTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFT-E 203 (310)
T ss_dssp TCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHH-H
T ss_pred CcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHH-H
Confidence 488999999999997653 46788887 55421 11 34778889999999999999999 9
Q ss_pred hhhhCCCCC----C-C-C--cchhhhhhhhh-hc--CCC----------cc-CC-HHHHHHHHHhCCCeee
Q 043665 69 CEESIPSND----E-G-R--KTQLCFDLLMA-TF--LNG----------KE-GS-VYDWKKLFLAAGFSHY 116 (132)
Q Consensus 69 ~~~al~~~g----~-~-~--~~~~~~dl~m~-~~--~~g----------~~-rt-~~e~~~ll~~aGf~~~ 116 (132)
+.+.++||+ + . + ......--.|+ .. ..| .. ++ .++..++|.+.||+.+
T Consensus 204 l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 204 IGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp HHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCCCHHHHHTTTTEEEE
T ss_pred HHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHHHHHHHHCcCccc
Confidence 999988988 1 1 1 11100001122 11 112 12 36 7899999999999987
No 183
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.25 E-value=0.012 Score=44.03 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=49.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---cCC-CceEEEehhhhcCCChH---HH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---AIP-PANVVLLKWILHDWSDE---ES 61 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~~de---~~ 61 (132)
+..+++..|..+++++|+ |.+++.+++ .+|++++. .++ ..+ .+|+|++.-.-+..... ..
T Consensus 105 ~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~ 184 (296)
T 1inl_A 105 LREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFT 184 (296)
T ss_dssp HHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCS
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhH
Confidence 456666668899999999 788887764 36898887 433 223 49999973221101110 12
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
.++++ ++++.|+|||
T Consensus 185 ~~~l~-~~~~~LkpgG 199 (296)
T 1inl_A 185 EEFYQ-ACYDALKEDG 199 (296)
T ss_dssp HHHHH-HHHHHEEEEE
T ss_pred HHHHH-HHHHhcCCCc
Confidence 68899 9999999998
No 184
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.24 E-value=0.011 Score=44.54 Aligned_cols=74 Identities=4% Similarity=0.013 Sum_probs=49.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----------CCCeEEEe-----ccccCC-CceEEEehhhhcCCChH---H
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----------TNNLEFFL-----EFEAIP-PANVVLLKWILHDWSDE---E 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~-----~~~~~P-~~D~~ll~~vlh~~~de---~ 60 (132)
+.++++..|.-+++++|+ |.|++.+++ .+|++++- |.+.-+ .+|+|++--. ..+... -
T Consensus 98 ~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~-dp~~~~~~L~ 176 (294)
T 3o4f_A 98 LREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT-DPIGPGESLF 176 (294)
T ss_dssp HHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCC-CCCCTTCCSS
T ss_pred HHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCC-CcCCCchhhc
Confidence 455665445568999999 889987764 57998886 334333 4999987311 111111 1
Q ss_pred HHHHHHHHhhhhCCCCC
Q 043665 61 SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g 77 (132)
..+.++ .|+++|+|||
T Consensus 177 t~eFy~-~~~~~L~p~G 192 (294)
T 3o4f_A 177 TSAFYE-GCKRCLNPGG 192 (294)
T ss_dssp CCHHHH-HHHHTEEEEE
T ss_pred CHHHHH-HHHHHhCCCC
Confidence 357889 9999999999
No 185
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=95.19 E-value=0.05 Score=43.10 Aligned_cols=72 Identities=18% Similarity=0.039 Sum_probs=52.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhh-------cC--------CCCeEEEe---cccc------CCCceEEEehhhhcCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIW-------WG--------TNNLEFFL---EFEA------IPPANVVLLKWILHDW 56 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a-------~~--------~~ri~~~~---~~~~------~P~~D~~ll~~vlh~~ 56 (132)
+..+++.+|..+++.+|+ |..++.| +. .++++++. +.++ ...+|+|++.+.++
T Consensus 257 a~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~-- 334 (433)
T 1u2z_A 257 VVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLF-- 334 (433)
T ss_dssp HHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTC--
T ss_pred HHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCccc--
Confidence 456777788889999998 5566655 32 26888875 4331 22499999987773
Q ss_pred ChHHHHHHHHHHhhhhCCCCC
Q 043665 57 SDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 57 ~de~~~~iL~~~~~~al~~~g 77 (132)
. ++....|+ ++.+.|+|||
T Consensus 335 ~-~d~~~~L~-el~r~LKpGG 353 (433)
T 1u2z_A 335 D-EDLNKKVE-KILQTAKVGC 353 (433)
T ss_dssp C-HHHHHHHH-HHHTTCCTTC
T ss_pred c-ccHHHHHH-HHHHhCCCCe
Confidence 2 34567789 9999999999
No 186
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=95.14 E-value=0.011 Score=44.43 Aligned_cols=75 Identities=9% Similarity=-0.022 Sum_probs=50.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---cCC-CceEEEehhhhcCCChH--HHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---AIP-PANVVLLKWILHDWSDE--ESL 62 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~~de--~~~ 62 (132)
+..+++..|..+++.+|+ |.+++.+++ .+|++++. .++ ..+ .+|+|++....+.-+.+ ...
T Consensus 110 ~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~ 189 (304)
T 2o07_A 110 LREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKE 189 (304)
T ss_dssp HHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------C
T ss_pred HHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHH
Confidence 456777678889999999 788887764 46898887 433 223 49999984433222211 235
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
.+++ ++++.|+|||
T Consensus 190 ~~l~-~~~~~LkpgG 203 (304)
T 2o07_A 190 SYYQ-LMKTALKEDG 203 (304)
T ss_dssp HHHH-HHHHHEEEEE
T ss_pred HHHH-HHHhccCCCe
Confidence 7899 9999999998
No 187
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.12 E-value=0.011 Score=41.58 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=52.6
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC------CCceEEEehhhhcCCChHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI------PPANVVLLKWILHDWSDEES 61 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~------P~~D~~ll~~vlh~~~de~~ 61 (132)
+..+++.+| +.+++.+|. |..++.+++ .++++++. .++ .+ ..+|++++. .+.+..
T Consensus 84 ~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d-----~~~~~~ 158 (229)
T 2avd_A 84 ALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVD-----ADKENC 158 (229)
T ss_dssp HHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEEC-----SCSTTH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEEC-----CCHHHH
Confidence 456777777 789999998 778887765 36899887 433 22 349999984 334446
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
..+++ ++.+.|+|||
T Consensus 159 ~~~l~-~~~~~L~pgG 173 (229)
T 2avd_A 159 SAYYE-RCLQLLRPGG 173 (229)
T ss_dssp HHHHH-HHHHHEEEEE
T ss_pred HHHHH-HHHHHcCCCe
Confidence 78899 9999999998
No 188
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=95.09 E-value=0.097 Score=35.70 Aligned_cols=68 Identities=7% Similarity=-0.119 Sum_probs=51.7
Q ss_pred HCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc---cC-C-CceEEEehhhhcCCChHHHHHHHHHHhhh--
Q 043665 8 AFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE---AI-P-PANVVLLKWILHDWSDEESLRYLKKKCEE-- 71 (132)
Q Consensus 8 ~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~---~~-P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~-- 71 (132)
+.+..+++.+|. |..++.+++ .++++++. +.+ .. + .+|++++....| +..++...+++ .+.+
T Consensus 64 ~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~-~~~~~~~~~l~-~~~~~~ 141 (189)
T 3p9n_A 64 SRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYN-VDSADVDAILA-ALGTNG 141 (189)
T ss_dssp HTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTT-SCHHHHHHHHH-HHHHSS
T ss_pred HCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCC-cchhhHHHHHH-HHHhcC
Confidence 356678999998 788888875 35898887 443 23 2 499999977755 44566788999 9988
Q ss_pred hCCCCC
Q 043665 72 SIPSND 77 (132)
Q Consensus 72 al~~~g 77 (132)
.|+|||
T Consensus 142 ~L~pgG 147 (189)
T 3p9n_A 142 WTREGT 147 (189)
T ss_dssp SCCTTC
T ss_pred ccCCCe
Confidence 999999
No 189
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.04 E-value=0.014 Score=44.63 Aligned_cols=74 Identities=5% Similarity=-0.009 Sum_probs=52.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccc---cCC--CceEEEehhhhcCCC-hHH--
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFE---AIP--PANVVLLKWILHDWS-DEE-- 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~---~~P--~~D~~ll~~vlh~~~-de~-- 60 (132)
+..+++..|..+++.+|+ |.+++.+++ .+|++++. .++ ..+ .+|+|++.... .+. .+.
T Consensus 135 a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~-p~~~~~~l~ 213 (334)
T 1xj5_A 135 LREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSD-PIGPAKELF 213 (334)
T ss_dssp HHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCC-TTSGGGGGG
T ss_pred HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCC-ccCcchhhh
Confidence 456777778899999999 788887764 35899887 433 333 49999984331 121 111
Q ss_pred HHHHHHHHhhhhCCCCC
Q 043665 61 SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 ~~~iL~~~~~~al~~~g 77 (132)
...+++ .+++.|+|||
T Consensus 214 ~~~~l~-~~~~~LkpgG 229 (334)
T 1xj5_A 214 EKPFFQ-SVARALRPGG 229 (334)
T ss_dssp SHHHHH-HHHHHEEEEE
T ss_pred HHHHHH-HHHHhcCCCc
Confidence 478999 9999999998
No 190
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.04 E-value=0.014 Score=44.01 Aligned_cols=75 Identities=5% Similarity=-0.047 Sum_probs=53.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----------CCCeEEEe--ccc---cCC-CceEEEehhhhcCC--C-hHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----------TNNLEFFL--EFE---AIP-PANVVLLKWILHDW--S-DEE 60 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~--~-de~ 60 (132)
+..+++.+|..+++.+|+ |.+++.+++ .+|++++. ..+ ..+ .+|+|++....|.. . .+.
T Consensus 92 ~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~ 171 (314)
T 1uir_A 92 LREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARL 171 (314)
T ss_dssp HHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGG
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchh
Confidence 456677667889999999 778887764 35898887 433 223 49999997655431 1 111
Q ss_pred --HHHHHHHHhhhhCCCCC
Q 043665 61 --SLRYLKKKCEESIPSND 77 (132)
Q Consensus 61 --~~~iL~~~~~~al~~~g 77 (132)
..++++ ++++.|+|||
T Consensus 172 l~~~~~l~-~~~~~LkpgG 189 (314)
T 1uir_A 172 LYTVEFYR-LVKAHLNPGG 189 (314)
T ss_dssp GSSHHHHH-HHHHTEEEEE
T ss_pred ccHHHHHH-HHHHhcCCCc
Confidence 368899 9999999998
No 191
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=94.92 E-value=0.051 Score=42.12 Aligned_cols=73 Identities=7% Similarity=-0.033 Sum_probs=55.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--cccc-CC--CceEEEehhhhcC---CChHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFEA-IP--PANVVLLKWILHD---WSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~~-~P--~~D~~ll~~vlh~---~~de~~~~iL~~ 67 (132)
+..+++. +.+++.+|. |..++.+++ .-+++++. +++. .+ .+|+|++...+|. ...+....+++
T Consensus 248 ~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~- 324 (381)
T 3dmg_A 248 TLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVN- 324 (381)
T ss_dssp HHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHH-
T ss_pred HHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHH-
Confidence 3455554 568999998 778887775 22477777 5553 33 4999999988887 44677889999
Q ss_pred HhhhhCCCCC
Q 043665 68 KCEESIPSND 77 (132)
Q Consensus 68 ~~~~al~~~g 77 (132)
++++.|+|||
T Consensus 325 ~~~~~LkpGG 334 (381)
T 3dmg_A 325 VAAARLRPGG 334 (381)
T ss_dssp HHHHHEEEEE
T ss_pred HHHHhcCcCc
Confidence 9999999998
No 192
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=94.92 E-value=0.073 Score=38.19 Aligned_cols=99 Identities=10% Similarity=-0.065 Sum_probs=64.7
Q ss_pred HHHHHH----CCCCeEEEeec-hhHHhhhcC-CCCeEEEe--cccc-----CC--CceEEEehhhhcCCChHHHHHHHHH
Q 043665 3 RAIATA----FPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFEA-----IP--PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 3 ~~l~~~----~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~~-----~P--~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
..+++. +|+.+++.+|+ |..++.++. .++|+++. ..+. .+ .+|++++... |. +...+|+
T Consensus 97 ~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~~----~~~~~l~- 170 (236)
T 2bm8_A 97 AWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-HA----NTFNIMK- 170 (236)
T ss_dssp HHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-CS----SHHHHHH-
T ss_pred HHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc-hH----hHHHHHH-
Confidence 445555 78999999998 777777765 57899987 4442 22 3899987554 53 3567899
Q ss_pred Hhhh-hCCCCCCC--CcchhhhhhhhhhcCCCccCCHHHHHHHHHhC--CCeeeE
Q 043665 68 KCEE-SIPSNDEG--RKTQLCFDLLMATFLNGKEGSVYDWKKLFLAA--GFSHYK 117 (132)
Q Consensus 68 ~~~~-al~~~g~~--~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~a--Gf~~~~ 117 (132)
.+.+ .|+|||-. .... ..+...+.+++.++++++ +|+...
T Consensus 171 ~~~r~~LkpGG~lv~~d~~----------~~~~~~~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 171 WAVDHLLEEGDYFIIEDMI----------PYWYRYAPQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp HHHHHTCCTTCEEEECSCH----------HHHHHHCHHHHHHHHHTTTTTEEEET
T ss_pred HHHHhhCCCCCEEEEEeCc----------ccccccCHHHHHHHHHhCcccEEEcc
Confidence 9996 99999820 0000 001112345788888888 577643
No 193
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=94.69 E-value=0.02 Score=37.91 Aligned_cols=100 Identities=10% Similarity=0.079 Sum_probs=63.8
Q ss_pred HHHHHHHC-CCCeEEEeechhHHhhhcCCCCeEEEe--ccc-c--------CC--CceEEEehhhhcCCChHH-------
Q 043665 2 ARAIATAF-PDIKCIVLICLLWWIIWWGTNNLEFFL--EFE-A--------IP--PANVVLLKWILHDWSDEE------- 60 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~-~--------~P--~~D~~ll~~vlh~~~de~------- 60 (132)
+..+++.+ |+.+++.+|....++ ..++++.. +.+ + ++ .+|+++....+|..++..
T Consensus 37 ~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~ 112 (180)
T 1ej0_A 37 SQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAM 112 (180)
T ss_dssp HHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHH
Confidence 34566764 778999999866322 26788877 554 3 55 399999988888665431
Q ss_pred --HHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 61 --SLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 61 --~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
...+|+ ++.+.|+|||-. . +... ...+..++.+.+++. |+..++.
T Consensus 113 ~~~~~~l~-~~~~~L~~gG~l-----~-----~~~~--~~~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 113 YLVELALE-MCRDVLAPGGSF-----V-----VKVF--QGEGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp HHHHHHHH-HHHHHEEEEEEE-----E-----EEEE--SSTTHHHHHHHHHHH-EEEEEEE
T ss_pred HHHHHHHH-HHHHHcCCCcEE-----E-----EEEe--cCCcHHHHHHHHHHh-hhhEEee
Confidence 168899 999999998720 0 0000 012345666666664 7766654
No 194
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=94.66 E-value=0.03 Score=39.82 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=50.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
+..+++..| .+++.+|. |..++.+++ .+++++.. +..+++ ++|+|++...+|.+.+ ++
T Consensus 106 ~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~~~---------~~ 175 (235)
T 1jg1_A 106 AALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPE---------PL 175 (235)
T ss_dssp HHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSSCCH---------HH
T ss_pred HHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCcHHHHHH---------HH
Confidence 456778888 89999996 778887765 24688877 544554 3899999999998875 45
Q ss_pred hhhCCCCC
Q 043665 70 EESIPSND 77 (132)
Q Consensus 70 ~~al~~~g 77 (132)
.+.|+|||
T Consensus 176 ~~~L~pgG 183 (235)
T 1jg1_A 176 IEQLKIGG 183 (235)
T ss_dssp HHTEEEEE
T ss_pred HHhcCCCc
Confidence 66788998
No 195
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=94.58 E-value=0.32 Score=35.17 Aligned_cols=118 Identities=8% Similarity=-0.065 Sum_probs=65.0
Q ss_pred HHHHH-CCCCeEEEeec-hhH----HhhhcCCCCeEEEe--ccc-----cCC-CceEEEehhhhcCCChHHHHHHHHHHh
Q 043665 4 AIATA-FPDIKCIVLIC-LLW----WIIWWGTNNLEFFL--EFE-----AIP-PANVVLLKWILHDWSDEESLRYLKKKC 69 (132)
Q Consensus 4 ~l~~~-~P~l~~~v~Dl-p~v----~~~a~~~~ri~~~~--~~~-----~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~ 69 (132)
.+++. -|+-+++.+|+ |.. ++.++...+|.++. ... .++ .+|+++..-. + .++...+++ .+
T Consensus 93 ~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a-~---~~~~~il~~-~~ 167 (232)
T 3id6_C 93 HVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIA-Q---PDQTDIAIY-NA 167 (232)
T ss_dssp HHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCC-C---TTHHHHHHH-HH
T ss_pred HHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCC-C---hhHHHHHHH-HH
Confidence 34443 46789999998 444 33444456787776 332 223 4999876422 2 233334455 66
Q ss_pred hhhCCCCCC--CCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecCC---cceEEEEE
Q 043665 70 EESIPSNDE--GRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG---LWSLIEAY 131 (132)
Q Consensus 70 ~~al~~~g~--~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~---~~~~ie~~ 131 (132)
+..|+|||. ........|... +-. -..++....|+++||++.+...+.. .+.++.++
T Consensus 168 ~~~LkpGG~lvisik~~~~d~t~----~~~-e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 168 KFFLKVNGDMLLVIKARSIDVTK----DPK-EIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp HHHEEEEEEEEEEEC-------C----CSS-SSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEE
T ss_pred HHhCCCCeEEEEEEccCCcccCC----CHH-HHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEE
Confidence 779999982 111112223211 111 1224455677889999998877643 46776665
No 196
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.37 E-value=0.016 Score=41.71 Aligned_cols=70 Identities=9% Similarity=0.047 Sum_probs=48.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC--------------CCCeEEEe--cccc----CC--CceEEEehhhhcCCCh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG--------------TNNLEFFL--EFEA----IP--PANVVLLKWILHDWSD 58 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~--------------~~ri~~~~--~~~~----~P--~~D~~ll~~vlh~~~d 58 (132)
+..+++.+|+.+++.+|. +.+++.+++ .++++++. .++. ++ .+|.+++ .++|
T Consensus 64 ~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~-----~~p~ 138 (246)
T 2vdv_E 64 MIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFF-----CFPD 138 (246)
T ss_dssp HHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEE-----ESCC
T ss_pred HHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEE-----ECCC
Confidence 567889999999999997 667776642 25788887 5442 33 2666653 2333
Q ss_pred HHH-----------HHHHHHHhhhhCCCCC
Q 043665 59 EES-----------LRYLKKKCEESIPSND 77 (132)
Q Consensus 59 e~~-----------~~iL~~~~~~al~~~g 77 (132)
... ..+|+ .+.+.|+|||
T Consensus 139 p~~k~~~~~~r~~~~~~l~-~~~~~LkpgG 167 (246)
T 2vdv_E 139 PHFKQRKHKARIITNTLLS-EYAYVLKEGG 167 (246)
T ss_dssp CC------CSSCCCHHHHH-HHHHHEEEEE
T ss_pred cccccchhHHhhccHHHHH-HHHHHcCCCC
Confidence 211 47899 9999999999
No 197
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=94.26 E-value=0.052 Score=37.55 Aligned_cols=64 Identities=5% Similarity=-0.089 Sum_probs=47.9
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
..+++. ..+++.+|. |..++.+++ .+++++.. .++..+ .+|++++...+|.+++ .+.
T Consensus 93 ~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~---------~~~ 161 (210)
T 3lbf_A 93 AILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT---------ALM 161 (210)
T ss_dssp HHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT---------HHH
T ss_pred HHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhhhH---------HHH
Confidence 445555 678999998 778887765 35788887 555332 4999999999999886 355
Q ss_pred hhCCCCC
Q 043665 71 ESIPSND 77 (132)
Q Consensus 71 ~al~~~g 77 (132)
+.|+|||
T Consensus 162 ~~L~pgG 168 (210)
T 3lbf_A 162 TQLDEGG 168 (210)
T ss_dssp HTEEEEE
T ss_pred HhcccCc
Confidence 6788988
No 198
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=94.20 E-value=0.0087 Score=42.60 Aligned_cols=111 Identities=11% Similarity=0.004 Sum_probs=70.7
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
..+++. +.+++.+|+ |..++.++. .++++++. +.+..+ .+|++++...+|..++.. ..+. .++
T Consensus 94 ~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~--~~~~-~~~ 168 (241)
T 3gdh_A 94 IQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYAT--AETF-DIR 168 (241)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSSGGGGG--SSSB-CTT
T ss_pred HHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCCcchhh--hHHH-HHH
Confidence 445554 478999998 778887775 25899888 554223 499999999998876654 2677 889
Q ss_pred hhCCCCCCCCcchhhhhhhhh-----hcCCCccCCHHHHHHHHHhCCCeeeEEEecCC
Q 043665 71 ESIPSNDEGRKTQLCFDLLMA-----TFLNGKEGSVYDWKKLFLAAGFSHYKITPNLG 123 (132)
Q Consensus 71 ~al~~~g~~~~~~~~~dl~m~-----~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 123 (132)
..|+|||- ..++...- ...-.+..+.+++..++...|..........+
T Consensus 169 ~~L~pgG~-----~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~~ 221 (241)
T 3gdh_A 169 TMMSPDGF-----EIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNN 221 (241)
T ss_dssp TSCSSCHH-----HHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEEETT
T ss_pred hhcCCcce-----eHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEehhhcC
Confidence 99999971 00000000 00112234577888888888866555444443
No 199
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.01 E-value=0.051 Score=40.65 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=50.2
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++..+ +.+++.+|+ |..++.+++ .+++++.. +.+..+ .+|+++....+|..+ + +
T Consensus 90 ~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~--------~-~ 160 (317)
T 1dl5_A 90 AAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP--------E-T 160 (317)
T ss_dssp HHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC--------H-H
T ss_pred HHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH--------H-H
Confidence 456677777 488999998 778887765 24688887 544322 499999999999887 4 6
Q ss_pred hhhhCCCCC
Q 043665 69 CEESIPSND 77 (132)
Q Consensus 69 ~~~al~~~g 77 (132)
+.+.|+|||
T Consensus 161 ~~~~LkpgG 169 (317)
T 1dl5_A 161 WFTQLKEGG 169 (317)
T ss_dssp HHHHEEEEE
T ss_pred HHHhcCCCc
Confidence 666888888
No 200
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=93.97 E-value=0.062 Score=38.63 Aligned_cols=74 Identities=9% Similarity=0.029 Sum_probs=49.3
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------------CCCeEEEe--ccc--c--CC--CceEEEehhhhcCCChH-
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------------TNNLEFFL--EFE--A--IP--PANVVLLKWILHDWSDE- 59 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------------~~ri~~~~--~~~--~--~P--~~D~~ll~~vlh~~~de- 59 (132)
+..+++++|+.+++.+|. +.+++.|++ ..+|+++. ..+ + ++ .+|.+++... ..|...
T Consensus 61 ~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~-dp~~k~~ 139 (235)
T 3ckk_A 61 LVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFP-DPHFKRT 139 (235)
T ss_dssp HHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESC-C------
T ss_pred HHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCC-Cchhhhh
Confidence 567889999999999998 667765531 45788887 443 2 44 3898876321 123211
Q ss_pred --H----HHHHHHHHhhhhCCCCC
Q 043665 60 --E----SLRYLKKKCEESIPSND 77 (132)
Q Consensus 60 --~----~~~iL~~~~~~al~~~g 77 (132)
. ...+|+ .+++.|+|||
T Consensus 140 h~krr~~~~~~l~-~~~~~LkpGG 162 (235)
T 3ckk_A 140 KHKWRIISPTLLA-EYAYVLRVGG 162 (235)
T ss_dssp -----CCCHHHHH-HHHHHEEEEE
T ss_pred hhhhhhhhHHHHH-HHHHHCCCCC
Confidence 0 136899 9999999999
No 201
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=93.97 E-value=0.049 Score=36.75 Aligned_cols=71 Identities=11% Similarity=-0.026 Sum_probs=48.2
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--cccc---C---C-CceEEEehhhhcCCChHHHHHHHH
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEA---I---P-PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~---~---P-~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
.+++ .+..+++.+|. |..++.++. .++++++. +.+. + + .+|++++....|....+.....+.
T Consensus 61 ~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~ 139 (187)
T 2fhp_A 61 EAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKML 139 (187)
T ss_dssp HHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHH
T ss_pred HHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHH
Confidence 3444 67789999999 788888775 25799888 4441 1 3 499999987766444444433333
Q ss_pred HHhhhhCCCCC
Q 043665 67 KKCEESIPSND 77 (132)
Q Consensus 67 ~~~~~al~~~g 77 (132)
. .+.|+|||
T Consensus 140 -~-~~~L~~gG 148 (187)
T 2fhp_A 140 -E-RQLLTNEA 148 (187)
T ss_dssp -H-TTCEEEEE
T ss_pred -H-hcccCCCC
Confidence 2 77899998
No 202
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=93.95 E-value=0.062 Score=39.47 Aligned_cols=66 Identities=5% Similarity=-0.074 Sum_probs=48.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----------CCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----------TNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----------~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..+++. + .+++.+|+ |.+++.+++ .+|++++. .++.+..+|++++. .+|.. ..++ +
T Consensus 87 ~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d-----~~dp~--~~~~-~ 156 (262)
T 2cmg_A 87 AHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL-----QEPDI--HRID-G 156 (262)
T ss_dssp HHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES-----SCCCH--HHHH-H
T ss_pred HHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC-----CCChH--HHHH-H
Confidence 3456665 7 89999998 888888875 35888876 44433459999974 33332 3899 9
Q ss_pred hhhhCCCCC
Q 043665 69 CEESIPSND 77 (132)
Q Consensus 69 ~~~al~~~g 77 (132)
+++.|+|||
T Consensus 157 ~~~~L~pgG 165 (262)
T 2cmg_A 157 LKRMLKEDG 165 (262)
T ss_dssp HHTTEEEEE
T ss_pred HHHhcCCCc
Confidence 999999998
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=93.90 E-value=0.21 Score=34.32 Aligned_cols=101 Identities=11% Similarity=-0.023 Sum_probs=67.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC----CC-CeEEEe--ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG----TN-NLEFFL--EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEESI 73 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~-ri~~~~--~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al 73 (132)
..+++. ..-+++.+|. |..++.++. .+ +++++. +.+ +| .+|++++.-..|.+.......+|+ ++.+.+
T Consensus 65 ~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p~~~~~~~~~~~~l~-~~~~~l 141 (207)
T 1wy7_A 65 YGALLL-GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIMNPPFGSQRKHADRPFLL-KAFEIS 141 (207)
T ss_dssp HHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEECCCCSSSSTTTTHHHHH-HHHHHC
T ss_pred HHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEEcCCCccccCCchHHHHH-HHHHhc
Confidence 345554 3347999998 778887775 12 788887 444 45 599999998888887666677888 888776
Q ss_pred CCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEe
Q 043665 74 PSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITP 120 (132)
Q Consensus 74 ~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~ 120 (132)
|+ . .+. +-....+.+...+++++.||+...+.+
T Consensus 142 --~~-------~---~~~--~~~~~~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 142 --DV-------V---YSI--HLAKPEVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp --SE-------E---EEE--EECCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred --Cc-------E---EEE--EeCCcCCHHHHHHHHHHCCCeEEEEEE
Confidence 31 0 011 101123456677889999998766543
No 204
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=93.84 E-value=0.029 Score=40.03 Aligned_cols=70 Identities=16% Similarity=0.112 Sum_probs=51.9
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cC------CCceEEEehhhhcCCChHHH
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AI------PPANVVLLKWILHDWSDEES 61 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~------P~~D~~ll~~vlh~~~de~~ 61 (132)
+..+++..| +.+++.+|. |..++.+++ .++|+++. ..+ .+ ..+|++++... .+..
T Consensus 87 ~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~-----~~~~ 161 (232)
T 3cbg_A 87 ALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDAD-----KRNY 161 (232)
T ss_dssp HHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSC-----GGGH
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCC-----HHHH
Confidence 456777777 789999998 777877764 35798887 332 22 34999987533 3456
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
..+++ ++.+.|+|||
T Consensus 162 ~~~l~-~~~~~LkpgG 176 (232)
T 3cbg_A 162 PRYYE-IGLNLLRRGG 176 (232)
T ss_dssp HHHHH-HHHHTEEEEE
T ss_pred HHHHH-HHHHHcCCCe
Confidence 78899 9999999998
No 205
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=93.83 E-value=0.019 Score=38.81 Aligned_cols=70 Identities=7% Similarity=-0.024 Sum_probs=47.8
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc---cCC-CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE---AIP-PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~---~~P-~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
..++++ +..+++.+|+ |..++.+++ .++++++. +.+ ..+ .+|++++....|. ......++ .
T Consensus 47 ~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~---~~~~~~~~-~ 121 (177)
T 2esr_A 47 IEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAK---ETIVATIE-A 121 (177)
T ss_dssp HHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHH---HHHHHHHH-H
T ss_pred HHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCc---chHHHHHH-H
Confidence 345554 7789999999 788888775 25788887 444 233 4999998765542 23345555 5
Q ss_pred hh--hhCCCCC
Q 043665 69 CE--ESIPSND 77 (132)
Q Consensus 69 ~~--~al~~~g 77 (132)
+. +.|+|||
T Consensus 122 l~~~~~L~~gG 132 (177)
T 2esr_A 122 LAAKNLLSEQV 132 (177)
T ss_dssp HHHTTCEEEEE
T ss_pred HHhCCCcCCCc
Confidence 55 8899998
No 206
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=93.79 E-value=0.022 Score=37.91 Aligned_cols=71 Identities=4% Similarity=-0.199 Sum_probs=47.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccccC------C-CceEEEehhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFEAI------P-PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~~~------P-~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
+..++++.++ ++.+|. |..++.++. .-+++++. +.+.. + .+|++++...+| -..++..+.+.
T Consensus 56 ~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~ 132 (171)
T 1ws6_A 56 GLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELL 132 (171)
T ss_dssp HHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHH
T ss_pred HHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHH
Confidence 3456666665 999999 788888775 22788887 44321 1 499999988777 33333444444
Q ss_pred HHhhhhCCCCC
Q 043665 67 KKCEESIPSND 77 (132)
Q Consensus 67 ~~~~~al~~~g 77 (132)
+ .+.|+|||
T Consensus 133 -~-~~~L~~gG 141 (171)
T 1ws6_A 133 -A-SGLVEAGG 141 (171)
T ss_dssp -H-HTCEEEEE
T ss_pred -h-hcccCCCc
Confidence 3 48899998
No 207
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=93.72 E-value=0.12 Score=35.52 Aligned_cols=96 Identities=9% Similarity=-0.049 Sum_probs=60.4
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-CCCeEEEe--ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-TNNLEFFL--EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-~~ri~~~~--~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
..+++. +..+++.+|. |..++.++. ..+++++. +.+ +| .+|++++...+|.+++.....+++ ++.+.+ |+
T Consensus 67 ~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~~~p~~~~~~~~~~~~l~-~~~~~~--g~ 141 (200)
T 1ne2_A 67 CGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIMNPPFGSVVKHSDRAFID-KAFETS--MW 141 (200)
T ss_dssp HHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEECCCC-------CHHHHH-HHHHHE--EE
T ss_pred HHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEECCCchhccCchhHHHHH-HHHHhc--Cc
Confidence 344444 5567999998 888888876 33888887 444 45 499999999999998766667888 887775 21
Q ss_pred CCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEE
Q 043665 78 EGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 78 ~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
+++.++ ..+.+.+.++++++| +...+
T Consensus 142 ------------~~~~~~--~~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 142 ------------IYSIGN--AKARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp ------------EEEEEE--GGGHHHHHHHHHHHE-EEEEE
T ss_pred ------------EEEEEc--CchHHHHHHHHHHCC-CEEEE
Confidence 111111 123567888889999 65544
No 208
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=93.58 E-value=0.17 Score=37.92 Aligned_cols=75 Identities=15% Similarity=0.090 Sum_probs=50.9
Q ss_pred HHHHHHHCC-CCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc--cCC-CceEEEeh------hhhc-------C
Q 043665 2 ARAIATAFP-DIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE--AIP-PANVVLLK------WILH-------D 55 (132)
Q Consensus 2 ~~~l~~~~P-~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~--~~P-~~D~~ll~------~vlh-------~ 55 (132)
+..+++..+ ..+++.+|. |..++.+++ ..+++++. +.+ ..+ .+|+|++. .+++ .
T Consensus 133 t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~ 212 (315)
T 1ixk_A 133 TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWN 212 (315)
T ss_dssp HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------
T ss_pred HHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhc
Confidence 356777765 589999998 667777665 34788877 443 233 49999982 2233 3
Q ss_pred CChHHH-------HHHHHHHhhhhCCCCC
Q 043665 56 WSDEES-------LRYLKKKCEESIPSND 77 (132)
Q Consensus 56 ~~de~~-------~~iL~~~~~~al~~~g 77 (132)
|+.++. .++|+ ++.+.|+|||
T Consensus 213 ~~~~~~~~~~~~q~~~L~-~~~~~LkpGG 240 (315)
T 1ixk_A 213 RTMDDIKFCQGLQMRLLE-KGLEVLKPGG 240 (315)
T ss_dssp CCHHHHHHHHHHHHHHHH-HHHHHEEEEE
T ss_pred CCHHHHHHHHHHHHHHHH-HHHHhCCCCC
Confidence 444432 58999 9999999997
No 209
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=93.56 E-value=0.046 Score=43.15 Aligned_cols=68 Identities=9% Similarity=-0.039 Sum_probs=49.1
Q ss_pred HHHHH-CCCCeEEEeechhHHhhhcCCCCeEEEe--ccc-cC--------CCceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 4 AIATA-FPDIKCIVLICLLWWIIWWGTNNLEFFL--EFE-AI--------PPANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 4 ~l~~~-~P~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~-~~--------P~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
.++++ +|+.+++.+|+.... ....+||+|+. +.+ ++ ..+|+|+.. ..|.|. +..+.|+ ++++
T Consensus 239 ~la~~~fP~a~V~GVDiSp~m--~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisd-gsH~~~--d~~~aL~-el~r 312 (419)
T 3sso_A 239 RMWKSFFPRGQIYGLDIMDKS--HVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDD-GSHINA--HVRTSFA-ALFP 312 (419)
T ss_dssp HHHHHHCTTCEEEEEESSCCG--GGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEEC-SCCCHH--HHHHHHH-HHGG
T ss_pred HHHHHhCCCCEEEEEECCHHH--hhcCCCcEEEEecccccchhhhhhcccCCccEEEEC-Ccccch--hHHHHHH-HHHH
Confidence 45554 699999999994432 22467899887 544 22 249999864 567664 4678899 9999
Q ss_pred hCCCCC
Q 043665 72 SIPSND 77 (132)
Q Consensus 72 al~~~g 77 (132)
.|+|||
T Consensus 313 vLKPGG 318 (419)
T 3sso_A 313 HVRPGG 318 (419)
T ss_dssp GEEEEE
T ss_pred hcCCCe
Confidence 999998
No 210
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=93.49 E-value=0.19 Score=37.06 Aligned_cols=72 Identities=8% Similarity=-0.004 Sum_probs=51.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCCCceEEEehhhhcCCChHHHHHHHHHHh-
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIPPANVVLLKWILHDWSDEESLRYLKKKC- 69 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P~~D~~ll~~vlh~~~de~~~~iL~~~~- 69 (132)
+..++++. .+++.+|+ |..++.+++ .++++++. +.+ ++|.+|+++. +.-++|+.+....+|. +.
T Consensus 43 t~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~fD~vv~-nlpy~~~~~~~~~~l~-~~~ 118 (285)
T 1zq9_A 43 TVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVA-NLPYQISSPFVFKLLL-HRP 118 (285)
T ss_dssp HHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCCCSEEEE-ECCGGGHHHHHHHHHH-CSS
T ss_pred HHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchhhcEEEE-ecCcccchHHHHHHHh-cCc
Confidence 45666664 47899998 777777765 15899888 655 5677998776 7777787777777775 43
Q ss_pred ---------------hhhCCCCC
Q 043665 70 ---------------EESIPSND 77 (132)
Q Consensus 70 ---------------~~al~~~g 77 (132)
+.+++|||
T Consensus 119 ~~~~~~~m~qkEva~r~vlkPGg 141 (285)
T 1zq9_A 119 FFRCAILMFQREFALRLVAKPGD 141 (285)
T ss_dssp CCSEEEEEEEHHHHHHHHCCTTC
T ss_pred chhhhhhhhhHHHHHHHhcCCCC
Confidence 24889998
No 211
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=93.34 E-value=0.1 Score=36.57 Aligned_cols=64 Identities=16% Similarity=0.007 Sum_probs=47.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
..+++.. .+++.+|. |..++.+++ .++++++. +.+..+ .+|++++..++|.+.+ .+.+.
T Consensus 86 ~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~---------~~~~~ 154 (231)
T 1vbf_A 86 ALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLLC---------KPYEQ 154 (231)
T ss_dssp HHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCCH---------HHHHT
T ss_pred HHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHHHH---------HHHHH
Confidence 4455554 68899998 778887765 22788887 555333 4999999999998874 45668
Q ss_pred CCCCC
Q 043665 73 IPSND 77 (132)
Q Consensus 73 l~~~g 77 (132)
|+|||
T Consensus 155 L~pgG 159 (231)
T 1vbf_A 155 LKEGG 159 (231)
T ss_dssp EEEEE
T ss_pred cCCCc
Confidence 88998
No 212
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.03 E-value=0.13 Score=36.27 Aligned_cols=66 Identities=15% Similarity=0.178 Sum_probs=48.1
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccC-C--CceEEEehhhhcCCChHHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAI-P--PANVVLLKWILHDWSDEESLRYLKKK 68 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~-P--~~D~~ll~~vlh~~~de~~~~iL~~~ 68 (132)
+..++++ ..+++.+|. |..++.+++ .+++++.. +.+.. + .+|++++ +.++ ...+|+ +
T Consensus 106 ~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~-----~~~~--~~~~l~-~ 175 (248)
T 2yvl_A 106 LAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFV-----DVRE--PWHYLE-K 175 (248)
T ss_dssp HHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEE-----CSSC--GGGGHH-H
T ss_pred HHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEE-----CCcC--HHHHHH-H
Confidence 3456666 779999997 778777765 26888887 65554 4 3999987 3332 246788 9
Q ss_pred hhhhCCCCC
Q 043665 69 CEESIPSND 77 (132)
Q Consensus 69 ~~~al~~~g 77 (132)
+.+.|+|||
T Consensus 176 ~~~~L~~gG 184 (248)
T 2yvl_A 176 VHKSLMEGA 184 (248)
T ss_dssp HHHHBCTTC
T ss_pred HHHHcCCCC
Confidence 999999998
No 213
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=93.01 E-value=0.1 Score=35.66 Aligned_cols=100 Identities=14% Similarity=0.039 Sum_probs=61.0
Q ss_pred HHHHHHHCC--CCeEEEeechhHHhhhcCCCCeEEEe--ccc-c-------------------------CC--CceEEEe
Q 043665 2 ARAIATAFP--DIKCIVLICLLWWIIWWGTNNLEFFL--EFE-A-------------------------IP--PANVVLL 49 (132)
Q Consensus 2 ~~~l~~~~P--~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~-~-------------------------~P--~~D~~ll 49 (132)
+..+++++| +.+++.+|+.... ..++++++. +.+ + ++ .+|+++.
T Consensus 37 ~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~ 112 (201)
T 2plw_A 37 CQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILS 112 (201)
T ss_dssp HHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEe
Confidence 456788888 6899999986631 234677766 443 2 34 4999998
Q ss_pred hhhhcCC----ChHH-----HHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 50 KWILHDW----SDEE-----SLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 50 ~~vlh~~----~de~-----~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
...+|.. .|.. ...+|+ .+.+.|+|||-. .+. ..++ .+..++...+++ .|..+.+.
T Consensus 113 ~~~~~~~g~~~~d~~~~~~~~~~~l~-~~~~~LkpgG~l-----v~~-----~~~~--~~~~~l~~~l~~-~f~~v~~~ 177 (201)
T 2plw_A 113 DAAVPCIGNKIDDHLNSCELTLSITH-FMEQYINIGGTY-----IVK-----MYLG--SQTNNLKTYLKG-MFQLVHTT 177 (201)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHH-HHHHHEEEEEEE-----EEE-----EECS--TTHHHHHHHHHT-TEEEEEEC
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHH-HHHHHccCCCEE-----EEE-----EeCC--CCHHHHHHHHHH-HHheEEEE
Confidence 7766642 1221 235888 999999999721 000 0111 235667777765 47665553
No 214
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=92.46 E-value=0.088 Score=38.12 Aligned_cols=68 Identities=10% Similarity=0.013 Sum_probs=49.1
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC---------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCChHHHHHHH
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG---------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWSDEESLRYL 65 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~---------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~de~~~~iL 65 (132)
+..+++. .|..+++.+|. |..++.+++ .++++++. +.+ +++ .+|++++ +. ++. ..+|
T Consensus 114 ~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~-~~----~~~--~~~l 186 (280)
T 1i9g_A 114 TLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL-DM----LAP--WEVL 186 (280)
T ss_dssp HHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE-ES----SCG--GGGH
T ss_pred HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE-CC----cCH--HHHH
Confidence 4556664 58899999999 888887764 24788887 544 343 3999998 22 221 2678
Q ss_pred HHHhhhhCCCCC
Q 043665 66 KKKCEESIPSND 77 (132)
Q Consensus 66 ~~~~~~al~~~g 77 (132)
+ ++.+.|+|||
T Consensus 187 ~-~~~~~L~pgG 197 (280)
T 1i9g_A 187 D-AVSRLLVAGG 197 (280)
T ss_dssp H-HHHHHEEEEE
T ss_pred H-HHHHhCCCCC
Confidence 8 9999999997
No 215
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=91.90 E-value=0.3 Score=34.04 Aligned_cols=66 Identities=8% Similarity=-0.043 Sum_probs=48.7
Q ss_pred HHHHHHC-----CCCeEEEeec-hhHHhhhcC-----------CCCeEEEe--ccccC----C---CceEEEehhhhcCC
Q 043665 3 RAIATAF-----PDIKCIVLIC-LLWWIIWWG-----------TNNLEFFL--EFEAI----P---PANVVLLKWILHDW 56 (132)
Q Consensus 3 ~~l~~~~-----P~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~--~~~~~----P---~~D~~ll~~vlh~~ 56 (132)
..+++.. |+.+++.+|. |..++.+++ .++++++. ..+.. + .+|++++...+|..
T Consensus 96 ~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 96 VCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL 175 (227)
T ss_dssp HHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC
T ss_pred HHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHH
Confidence 3455554 7789999998 777777764 25788887 54433 2 49999999998864
Q ss_pred ChHHHHHHHHHHhhhhCCCCC
Q 043665 57 SDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 57 ~de~~~~iL~~~~~~al~~~g 77 (132)
++ ++.+.|+|||
T Consensus 176 --------~~-~~~~~LkpgG 187 (227)
T 2pbf_A 176 --------PE-ILVDLLAENG 187 (227)
T ss_dssp --------CH-HHHHHEEEEE
T ss_pred --------HH-HHHHhcCCCc
Confidence 46 7788899998
No 216
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=91.82 E-value=0.42 Score=36.06 Aligned_cols=103 Identities=12% Similarity=-0.035 Sum_probs=66.7
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCC--CceEEEehhhhcCC-Ch-H----HHH
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIP--PANVVLLKWILHDW-SD-E----ESL 62 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~-~d-e----~~~ 62 (132)
++.++... |+.+++.+|. |.+++.+++ -++|++.. +.+ +.+ .+|++++.--.+.. .+ . .-.
T Consensus 218 ~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~ 297 (354)
T 3tma_A 218 ALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYW 297 (354)
T ss_dssp HHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHH
T ss_pred HHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHH
Confidence 45667766 8999999998 788888875 23889888 554 222 37999884322211 11 1 126
Q ss_pred HHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 63 RYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 63 ~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.+++ .+.+.|+|||.. . +.+ .+.+.++.+++ .||+..+...+
T Consensus 298 ~~~~-~~~~~LkpgG~l-----~----i~t------~~~~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 298 DFLR-GALALLPPGGRV-----A----LLT------LRPALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp HHHH-HHHHTSCTTCEE-----E----EEE------SCHHHHHHHCC-TTEEEEEEEEC
T ss_pred HHHH-HHHHhcCCCcEE-----E----EEe------CCHHHHHHHhh-cCcEEEEEEEE
Confidence 7888 999999998620 0 000 13455666666 89998877765
No 217
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=91.62 E-value=0.25 Score=36.02 Aligned_cols=75 Identities=9% Similarity=-0.028 Sum_probs=48.9
Q ss_pred HHHHHHHCCC-CeEEEeec-hhHHhhhcC------CCCeEEEe--ccc--c----CC-CceEEEeh------hhhc---C
Q 043665 2 ARAIATAFPD-IKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE--A----IP-PANVVLLK------WILH---D 55 (132)
Q Consensus 2 ~~~l~~~~P~-l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~--~----~P-~~D~~ll~------~vlh---~ 55 (132)
+..+++..++ .+++.+|. |..++.+++ ..+++++. +.+ . .+ .+|++++. .+++ .
T Consensus 98 t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~ 177 (274)
T 3ajd_A 98 TTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN 177 (274)
T ss_dssp HHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC----------
T ss_pred HHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC
Confidence 3457777777 89999998 666776654 34788877 333 1 13 49999985 2332 1
Q ss_pred CChHH-------HHHHHHHHhhhhCCCCC
Q 043665 56 WSDEE-------SLRYLKKKCEESIPSND 77 (132)
Q Consensus 56 ~~de~-------~~~iL~~~~~~al~~~g 77 (132)
|+.++ -.++|+ ++.+.|+|||
T Consensus 178 ~~~~~~~~~~~~~~~~l~-~~~~~LkpgG 205 (274)
T 3ajd_A 178 VSEEDIKYCSLRQKELID-IGIDLLKKDG 205 (274)
T ss_dssp --HHHHTGGGTCHHHHHH-HHHHHEEEEE
T ss_pred CCHHHHHHHHHHHHHHHH-HHHHhCCCCC
Confidence 43333 368999 9999999997
No 218
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=91.57 E-value=0.18 Score=36.87 Aligned_cols=69 Identities=13% Similarity=0.102 Sum_probs=51.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--cccc-CC-CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEA-IP-PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~-~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
+..++++.+..+++.+|. |..++.+++ -++++++. .++. .+ .+|++++.... ....+++ .+.
T Consensus 134 s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~------~~~~~l~-~~~ 206 (272)
T 3a27_A 134 TIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH------KTHKFLD-KTF 206 (272)
T ss_dssp HHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS------SGGGGHH-HHH
T ss_pred HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc------cHHHHHH-HHH
Confidence 467788888899999999 888888775 25677777 5443 23 49999886443 3456888 888
Q ss_pred hhCCCCC
Q 043665 71 ESIPSND 77 (132)
Q Consensus 71 ~al~~~g 77 (132)
+.|+|||
T Consensus 207 ~~LkpgG 213 (272)
T 3a27_A 207 EFLKDRG 213 (272)
T ss_dssp HHEEEEE
T ss_pred HHcCCCC
Confidence 8999987
No 219
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=91.56 E-value=0.19 Score=37.69 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=47.6
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC-----------------CCCeEEEe--ccc---cCC--CceEEEehhhhcC
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG-----------------TNNLEFFL--EFE---AIP--PANVVLLKWILHD 55 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~-----------------~~ri~~~~--~~~---~~P--~~D~~ll~~vlh~ 55 (132)
+..+++. .|+.+++.+|. |..++.+++ .+++++.. +.+ +++ .+|++++. ..+.
T Consensus 120 ~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~-~~~~ 198 (336)
T 2b25_A 120 SLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALD-MLNP 198 (336)
T ss_dssp HHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEEC-SSST
T ss_pred HHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEEC-CCCH
Confidence 4566776 58899999998 777777765 15898887 544 344 39999873 2222
Q ss_pred CChHHHHHHHHHHhhhhCCCCC
Q 043665 56 WSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 56 ~~de~~~~iL~~~~~~al~~~g 77 (132)
| .+++ .+.+.|+|||
T Consensus 199 ~------~~l~-~~~~~LkpgG 213 (336)
T 2b25_A 199 H------VTLP-VFYPHLKHGG 213 (336)
T ss_dssp T------TTHH-HHGGGEEEEE
T ss_pred H------HHHH-HHHHhcCCCc
Confidence 2 2788 9999999999
No 220
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=91.51 E-value=0.13 Score=37.93 Aligned_cols=66 Identities=9% Similarity=-0.112 Sum_probs=50.0
Q ss_pred CCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
|..+.+.+|+ +..++.++. ..+.++.. ... +.|+ +|++++.-++|...+++....+ ++.++|++++
T Consensus 125 ~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~LE~q~~~~~~--~ll~aL~~~~ 200 (253)
T 3frh_A 125 GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLEREQAGSAM--ALLQSLNTPR 200 (253)
T ss_dssp TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHHHHHSTTHHH--HHHHHCBCSE
T ss_pred cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHhhhhchhhHH--HHHHHhcCCC
Confidence 8999999999 778888876 44555555 444 5554 9999999889888777755444 5777999875
No 221
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=91.51 E-value=0.13 Score=35.66 Aligned_cols=69 Identities=13% Similarity=0.025 Sum_probs=47.2
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC------C--CCeEEEe--ccc---cC--CC-ceEEEehhhhcCCChHHHHHHHH
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG------T--NNLEFFL--EFE---AI--PP-ANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~------~--~ri~~~~--~~~---~~--P~-~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
.++++. ..+++.+|+ |..++.+++ . ++++++. +++ .. .. +|++++...+| . +....+++
T Consensus 70 ~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-~--~~~~~~l~ 145 (201)
T 2ift_A 70 EALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH-F--NLAEQAIS 145 (201)
T ss_dssp HHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS-S--CHHHHHHH
T ss_pred HHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCC-C--ccHHHHHH
Confidence 344443 358999998 778888775 2 6899887 443 22 25 89999977755 3 33456777
Q ss_pred HHh--hhhCCCCC
Q 043665 67 KKC--EESIPSND 77 (132)
Q Consensus 67 ~~~--~~al~~~g 77 (132)
.+ .+.|+|||
T Consensus 146 -~~~~~~~LkpgG 157 (201)
T 2ift_A 146 -LLCENNWLKPNA 157 (201)
T ss_dssp -HHHHTTCEEEEE
T ss_pred -HHHhcCccCCCc
Confidence 77 55699998
No 222
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.33 E-value=0.57 Score=36.28 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=67.4
Q ss_pred CCCeEEEeechhHH--------hhhcC-----------CCC---eEEEe--ccc-cCCC--ceEEEehhhhcCCCh----
Q 043665 10 PDIKCIVLICLLWW--------IIWWG-----------TNN---LEFFL--EFE-AIPP--ANVVLLKWILHDWSD---- 58 (132)
Q Consensus 10 P~l~~~v~Dlp~v~--------~~a~~-----------~~r---i~~~~--~~~-~~P~--~D~~ll~~vlh~~~d---- 58 (132)
|++++..-|||.-= +..++ ..+ +.-++ |+. .+|. .|+++.+..||-.++
T Consensus 90 pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~ 169 (374)
T 3b5i_A 90 PEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPES 169 (374)
T ss_dssp CCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGG
T ss_pred CceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchh
Confidence 88999999998521 21111 011 12333 776 5673 999999999997662
Q ss_pred --------------------------------HHHHHHHHHHhhhhCCCCC---------CC----Ccc--hhhh-hhh-
Q 043665 59 --------------------------------EESLRYLKKKCEESIPSND---------EG----RKT--QLCF-DLL- 89 (132)
Q Consensus 59 --------------------------------e~~~~iL~~~~~~al~~~g---------~~----~~~--~~~~-dl~- 89 (132)
.+-..+|+ ..++.|+||| +. .+. ...+ ++.
T Consensus 170 l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~-~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~ 248 (374)
T 3b5i_A 170 VTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR-ARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQ 248 (374)
T ss_dssp GGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH-HHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHH
T ss_pred hhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHH
Confidence 13445799 8999999999 11 101 1122 221
Q ss_pred h----hhc-----------CC--CccCCHHHHHHHHH-hCCCeeeEEE
Q 043665 90 M----ATF-----------LN--GKEGSVYDWKKLFL-AAGFSHYKIT 119 (132)
Q Consensus 90 m----~~~-----------~~--g~~rt~~e~~~ll~-~aGf~~~~~~ 119 (132)
. |+. ++ -..+|.+|++++++ ++||++.++.
T Consensus 249 ~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le 296 (374)
T 3b5i_A 249 DAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLV 296 (374)
T ss_dssp HHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEE
Confidence 0 111 11 22489999999998 5899998764
No 223
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.01 E-value=3.1 Score=31.63 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=74.5
Q ss_pred CCCeEEEeechhHHhhhc-----------------------------CCCCeEEEe--ccc--c---------CC-C-ce
Q 043665 10 PDIKCIVLICLLWWIIWW-----------------------------GTNNLEFFL--EFE--A---------IP-P-AN 45 (132)
Q Consensus 10 P~l~~~v~Dlp~v~~~a~-----------------------------~~~ri~~~~--~~~--~---------~P-~-~D 45 (132)
++++..=+|+|.+++.=+ ..++..+++ +.+ . ++ . --
T Consensus 114 ~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Pt 193 (334)
T 3iei_A 114 LSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPT 193 (334)
T ss_dssp CCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCE
T ss_pred CCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCE
Confidence 578899999999988311 146888888 554 1 22 2 34
Q ss_pred EEEehhhhcCCChHHHHHHHHHHhhhhCCCCC----CCCcchhhhhhhhhhc---C----CC--ccCCHHHHHHHHHhCC
Q 043665 46 VVLLKWILHDWSDEESLRYLKKKCEESIPSND----EGRKTQLCFDLLMATF---L----NG--KEGSVYDWKKLFLAAG 112 (132)
Q Consensus 46 ~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g----~~~~~~~~~dl~m~~~---~----~g--~~rt~~e~~~ll~~aG 112 (132)
+++.-.+|.+++.+++..+|+ .+.+..+++. +.......+.-.|+.+ . -| ...|.++..+.|.++|
T Consensus 194 l~iaEGvL~YL~~~~~~~ll~-~ia~~f~~~~~i~yE~i~p~d~fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~G 272 (334)
T 3iei_A 194 LLIAECVLVYMTPEQSANLLK-WAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNG 272 (334)
T ss_dssp EEEEESCGGGSCHHHHHHHHH-HHHHHCSSEEEEEEEECCTTSHHHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTT
T ss_pred EEEEchhhhCCCHHHHHHHHH-HHHHhCCCceEEEEeccCCCCHHHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcC
Confidence 777789999999999999999 9998876654 1100011222222211 1 12 2367899999999999
Q ss_pred CeeeEEEec
Q 043665 113 FSHYKITPN 121 (132)
Q Consensus 113 f~~~~~~~~ 121 (132)
|+.+.+.+.
T Consensus 273 w~~~~~~d~ 281 (334)
T 3iei_A 273 WETASAVDM 281 (334)
T ss_dssp CSEEEEEEH
T ss_pred CCcceeecH
Confidence 998776654
No 224
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=90.75 E-value=0.26 Score=38.24 Aligned_cols=72 Identities=7% Similarity=0.084 Sum_probs=49.9
Q ss_pred HHHHCCCCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChH-HHHHHHHHHhhhh
Q 043665 5 IATAFPDIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDE-ESLRYLKKKCEES 72 (132)
Q Consensus 5 l~~~~P~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de-~~~~iL~~~~~~a 72 (132)
++.+.-.-+++.+|...+++.|++ .++|+++. +.+ ++|. +|+++.-++-+..-.| ....+|. ...+.
T Consensus 100 ~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l~~e~~l~~~l~-a~~r~ 178 (376)
T 4hc4_A 100 FCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLH-ARTKW 178 (376)
T ss_dssp HHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTBTTTCSHHHHHH-HHHHH
T ss_pred HHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccccccchhhhHHH-HHHhh
Confidence 344444457999998777777764 68999998 444 5674 9999875443333333 3566777 77789
Q ss_pred CCCCC
Q 043665 73 IPSND 77 (132)
Q Consensus 73 l~~~g 77 (132)
|+|||
T Consensus 179 Lkp~G 183 (376)
T 4hc4_A 179 LKEGG 183 (376)
T ss_dssp EEEEE
T ss_pred CCCCc
Confidence 99999
No 225
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=90.50 E-value=0.76 Score=35.14 Aligned_cols=102 Identities=7% Similarity=-0.048 Sum_probs=66.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC--CceEEEehhhhcCCC------hHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP--PANVVLLKWILHDWS------DEESL 62 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P--~~D~~ll~~vlh~~~------de~~~ 62 (132)
++.+++..+..+++.+|+ |.+++.++. .++++++. +.+ +.+ .+|++++.--.+... .+.-.
T Consensus 232 ~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~ 311 (373)
T 3tm4_A 232 LIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYM 311 (373)
T ss_dssp HHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHH
T ss_pred HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHH
Confidence 456777777778999998 788888875 25889888 555 443 499999853322111 11125
Q ss_pred HHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEec
Q 043665 63 RYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPN 121 (132)
Q Consensus 63 ~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 121 (132)
.+++ .+++.| +|+ . .+.+ .+.+.+++.+++.||+..+..++
T Consensus 312 ~~~~-~l~r~l-~g~-----~-----~~i~------~~~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 312 KFFN-ELAKVL-EKR-----G-----VFIT------TEKKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHH-HHHHHE-EEE-----E-----EEEE------SCHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHH-HHHHHc-CCe-----E-----EEEE------CCHHHHHHHHHHcCCEEEEEEEE
Confidence 6677 777766 221 0 0111 25778889999999999887665
No 226
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=90.43 E-value=0.11 Score=36.45 Aligned_cols=58 Identities=12% Similarity=0.018 Sum_probs=44.3
Q ss_pred CCeEEEeec-hhHHhhhcC-----------CCCeEEEe--ccccCC---CceEEEehhhhcCCChHHHHHHHHHHhhhhC
Q 043665 11 DIKCIVLIC-LLWWIIWWG-----------TNNLEFFL--EFEAIP---PANVVLLKWILHDWSDEESLRYLKKKCEESI 73 (132)
Q Consensus 11 ~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~--~~~~~P---~~D~~ll~~vlh~~~de~~~~iL~~~~~~al 73 (132)
..+++.+|. |..++.+++ .++++++. ..++++ .+|+++....+|... + ++.+.|
T Consensus 114 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~-~~~~~L 184 (227)
T 1r18_A 114 DTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTP--------T-ELINQL 184 (227)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCSEEEEEECSCBSSCC--------H-HHHHTE
T ss_pred cCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCCccEEEECCchHHHH--------H-HHHHHh
Confidence 468999997 777777764 25788887 555443 399999999998765 5 777788
Q ss_pred CCCC
Q 043665 74 PSND 77 (132)
Q Consensus 74 ~~~g 77 (132)
+|||
T Consensus 185 kpgG 188 (227)
T 1r18_A 185 ASGG 188 (227)
T ss_dssp EEEE
T ss_pred cCCC
Confidence 9998
No 227
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=89.94 E-value=0.92 Score=35.58 Aligned_cols=75 Identities=11% Similarity=0.027 Sum_probs=51.8
Q ss_pred HHHHHHHCCC-CeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-c--CC-C-ceEEEe------hhhhcCCChH-
Q 043665 2 ARAIATAFPD-IKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-A--IP-P-ANVVLL------KWILHDWSDE- 59 (132)
Q Consensus 2 ~~~l~~~~P~-l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~--~P-~-~D~~ll------~~vlh~~~de- 59 (132)
+..+++..++ .+++.+|. |..++.+++ ..+++++. +.+ + ++ + +|++++ ..+++..+|.
T Consensus 274 t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~ 353 (450)
T 2yxl_A 274 TTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELR 353 (450)
T ss_dssp HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHH
T ss_pred HHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhh
Confidence 3567777777 89999998 556766654 34788876 433 2 44 3 999996 3455544442
Q ss_pred ------HH-------HHHHHHHhhhhCCCCC
Q 043665 60 ------ES-------LRYLKKKCEESIPSND 77 (132)
Q Consensus 60 ------~~-------~~iL~~~~~~al~~~g 77 (132)
+. ..+|+ ++.+.|+|||
T Consensus 354 ~~~~~~~~~~l~~~q~~iL~-~a~~~LkpGG 383 (450)
T 2yxl_A 354 WRLREDKINEMSQLQRELLE-SAARLVKPGG 383 (450)
T ss_dssp HHCCTTSHHHHHHHHHHHHH-HHHTTEEEEE
T ss_pred hhCCHHHHHHHHHHHHHHHH-HHHHhcCCCc
Confidence 22 67899 9999999997
No 228
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=89.16 E-value=0.51 Score=32.84 Aligned_cols=66 Identities=6% Similarity=-0.100 Sum_probs=47.9
Q ss_pred HHHHHHC-CCCeEEEeec-hhHHhhhcC-----------CCCeEEEe--ccccC---CCceEEEehhhhcCCChHHHHHH
Q 043665 3 RAIATAF-PDIKCIVLIC-LLWWIIWWG-----------TNNLEFFL--EFEAI---PPANVVLLKWILHDWSDEESLRY 64 (132)
Q Consensus 3 ~~l~~~~-P~l~~~v~Dl-p~v~~~a~~-----------~~ri~~~~--~~~~~---P~~D~~ll~~vlh~~~de~~~~i 64 (132)
..+++.. |+.+++.+|. |..++.+++ .++++++. ..+.. ..+|++++...++.+.
T Consensus 93 ~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~------- 165 (226)
T 1i1n_A 93 ACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVP------- 165 (226)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSCC-------
T ss_pred HHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHHHH-------
Confidence 4556654 6789999998 777877764 24788887 44322 2499999998887654
Q ss_pred HHHHhhhhCCCCC
Q 043665 65 LKKKCEESIPSND 77 (132)
Q Consensus 65 L~~~~~~al~~~g 77 (132)
+ ++.+.|+|||
T Consensus 166 -~-~~~~~LkpgG 176 (226)
T 1i1n_A 166 -Q-ALIDQLKPGG 176 (226)
T ss_dssp -H-HHHHTEEEEE
T ss_pred -H-HHHHhcCCCc
Confidence 5 7778899998
No 229
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=88.75 E-value=0.71 Score=31.87 Aligned_cols=69 Identities=9% Similarity=0.016 Sum_probs=45.4
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc--cCC--CceEEEehhhhcCCChHHHHHHHHHHhh
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE--AIP--PANVVLLKWILHDWSDEESLRYLKKKCE 70 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~--~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~ 70 (132)
.++++.. -+++.+|. |..++.+++ .++++++. +.+ +.+ .+|++++...+| +. ....+++ .+.
T Consensus 71 ~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~-~~--~~~~~l~-~l~ 145 (202)
T 2fpo_A 71 EALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR-RG--LLEETIN-LLE 145 (202)
T ss_dssp HHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS-TT--THHHHHH-HHH
T ss_pred HHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC-CC--cHHHHHH-HHH
Confidence 3444432 48999998 778888775 25888887 444 222 499999876655 22 2345566 665
Q ss_pred h--hCCCCC
Q 043665 71 E--SIPSND 77 (132)
Q Consensus 71 ~--al~~~g 77 (132)
+ .|+|||
T Consensus 146 ~~~~L~pgG 154 (202)
T 2fpo_A 146 DNGWLADEA 154 (202)
T ss_dssp HTTCEEEEE
T ss_pred hcCccCCCc
Confidence 4 489988
No 230
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=88.67 E-value=0.42 Score=38.08 Aligned_cols=74 Identities=9% Similarity=-0.026 Sum_probs=50.7
Q ss_pred HHHHHHHCCC-CeEEEeec-hhHHhhhcC------CCCeEEEe--ccc--c-CCC-ceEEEe-------------hhhhc
Q 043665 2 ARAIATAFPD-IKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE--A-IPP-ANVVLL-------------KWILH 54 (132)
Q Consensus 2 ~~~l~~~~P~-l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~--~-~P~-~D~~ll-------------~~vlh 54 (132)
+..+++..++ .+++.+|+ |..++.+++ .. |+++. ..+ . .++ +|+|++ ..+..
T Consensus 116 t~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~ 194 (464)
T 3m6w_A 116 TTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAAR 194 (464)
T ss_dssp HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGG
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhh
Confidence 3567777765 68999998 667777664 23 66665 332 1 343 999996 23444
Q ss_pred CCChHHH-------HHHHHHHhhhhCCCCC
Q 043665 55 DWSDEES-------LRYLKKKCEESIPSND 77 (132)
Q Consensus 55 ~~~de~~-------~~iL~~~~~~al~~~g 77 (132)
.|+.++. .++|+ ++.+.|+|||
T Consensus 195 ~~~~~~~~~l~~~Q~~iL~-~a~~~LkpGG 223 (464)
T 3m6w_A 195 HWGPSAPKRMAEVQKALLA-QASRLLGPGG 223 (464)
T ss_dssp GCCTTHHHHHHHHHHHHHH-HHHTTEEEEE
T ss_pred hcCHHHHHHHHHHHHHHHH-HHHHhcCCCc
Confidence 5655554 78999 9999999998
No 231
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=88.66 E-value=0.43 Score=37.16 Aligned_cols=74 Identities=5% Similarity=-0.122 Sum_probs=48.3
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC--------------CCCeEEEe-----cccc----CCCceEEEehhhhc---
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG--------------TNNLEFFL-----EFEA----IPPANVVLLKWILH--- 54 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~--------------~~ri~~~~-----~~~~----~P~~D~~ll~~vlh--- 54 (132)
+.++++ ||.-+++++|+ |.|++.+++ .+|++++- |.+. -..||+|++--.=.
T Consensus 220 ~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s 298 (381)
T 3c6k_A 220 LCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIS 298 (381)
T ss_dssp HHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCC
T ss_pred HHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCccc
Confidence 455664 67788999999 889998764 25677665 3332 22499998731100
Q ss_pred ----C-CChHHHHHHHHHHhhhhCCCCC
Q 043665 55 ----D-WSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 55 ----~-~~de~~~~iL~~~~~~al~~~g 77 (132)
. -...-..+.++ .++++|+|||
T Consensus 299 ~~p~g~a~~Lft~eFy~-~~~~~L~p~G 325 (381)
T 3c6k_A 299 TSPEEDSTWEFLRLILD-LSMKVLKQDG 325 (381)
T ss_dssp CC----CHHHHHHHHHH-HHHHTEEEEE
T ss_pred CcccCcchHHHHHHHHH-HHHHhcCCCC
Confidence 0 01122467889 9999999998
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=88.25 E-value=0.36 Score=36.36 Aligned_cols=102 Identities=8% Similarity=0.078 Sum_probs=64.6
Q ss_pred HHHHHHCCC-----CeEEEeec-hhHHhhhcC-----CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHH------
Q 043665 3 RAIATAFPD-----IKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEES------ 61 (132)
Q Consensus 3 ~~l~~~~P~-----l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~------ 61 (132)
..+++..|. .+++.+|+ |..++.++. .-+++++. .+++.+ .+|+++..--++.|++++.
T Consensus 146 ~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~ 225 (344)
T 2f8l_A 146 TTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFEL 225 (344)
T ss_dssp HHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEECCCSEESCHHHHTTSTT
T ss_pred HHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECCCCCCcCchhhhhhccc
Confidence 445555554 67899998 777777765 33567766 666543 4999998877666655442
Q ss_pred ----------HHHHHHHhhhhCCCCCCCC--cchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCee
Q 043665 62 ----------LRYLKKKCEESIPSNDEGR--KTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSH 115 (132)
Q Consensus 62 ----------~~iL~~~~~~al~~~g~~~--~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~ 115 (132)
..+++ ++.+.|+|||-.. -.... +++ .+.+++++++.+.|+..
T Consensus 226 ~~~~g~~~~~~~~l~-~~~~~Lk~gG~~~~v~p~~~--------~~~--~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 226 CREEGHSFAHFLFIE-QGMRYTKPGGYLFFLVPDAM--------FGT--SDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp CCSSSCEEHHHHHHH-HHHHTEEEEEEEEEEEEGGG--------GGS--TTHHHHHHHHHHHEEEE
T ss_pred cCCCCcchHHHHHHH-HHHHHhCCCCEEEEEECchh--------cCC--chHHHHHHHHHhCCeEE
Confidence 25788 8888899886200 00001 111 12478888888888643
No 233
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=87.57 E-value=0.81 Score=35.60 Aligned_cols=75 Identities=8% Similarity=0.009 Sum_probs=50.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-c--CC--CceEEEe------hhhhcCCCh----
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-A--IP--PANVVLL------KWILHDWSD---- 58 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~--~P--~~D~~ll------~~vlh~~~d---- 58 (132)
+..+++..|+.+++.+|. |..++.+++ .-+++++. +.+ + ++ .+|++++ ..+++.-+|
T Consensus 261 t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~ 340 (429)
T 1sqg_A 261 TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL 340 (429)
T ss_dssp HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH
T ss_pred HHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhc
Confidence 456788888889999998 566666654 23566666 443 1 33 3999996 234444333
Q ss_pred ---HHH-------HHHHHHHhhhhCCCCC
Q 043665 59 ---EES-------LRYLKKKCEESIPSND 77 (132)
Q Consensus 59 ---e~~-------~~iL~~~~~~al~~~g 77 (132)
++. ..+|+ ++.+.|+|||
T Consensus 341 ~~~~~~~~l~~~q~~~L~-~a~~~LkpGG 368 (429)
T 1sqg_A 341 RRDRDIPELAQLQSEILD-AIWPHLKTGG 368 (429)
T ss_dssp CCTTHHHHHHHHHHHHHH-HHGGGEEEEE
T ss_pred CCHHHHHHHHHHHHHHHH-HHHHhcCCCC
Confidence 222 58899 9999999998
No 234
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=87.06 E-value=1.2 Score=35.41 Aligned_cols=74 Identities=14% Similarity=0.156 Sum_probs=50.2
Q ss_pred HHHHHHCC-CCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc--c-CC-CceEEEeh-------------hhhcC
Q 043665 3 RAIATAFP-DIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE--A-IP-PANVVLLK-------------WILHD 55 (132)
Q Consensus 3 ~~l~~~~P-~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~--~-~P-~~D~~ll~-------------~vlh~ 55 (132)
..+++..+ .-+++.+|+ +..++.+++ ..+|+++. ..+ . .+ .+|+|++- .+...
T Consensus 133 ~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~ 212 (479)
T 2frx_A 133 TQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKN 212 (479)
T ss_dssp HHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhh
Confidence 45666654 578999998 666776654 34687776 333 2 44 39999981 23345
Q ss_pred CChHH-------HHHHHHHHhhhhCCCCC
Q 043665 56 WSDEE-------SLRYLKKKCEESIPSND 77 (132)
Q Consensus 56 ~~de~-------~~~iL~~~~~~al~~~g 77 (132)
|+.++ -.++|+ ++.+.|+|||
T Consensus 213 ~~~~~~~~l~~~q~~iL~-~a~~~LkpGG 240 (479)
T 2frx_A 213 WSPESNQEIAATQRELID-SAFHALRPGG 240 (479)
T ss_dssp CCHHHHHHHHHHHHHHHH-HHHHHEEEEE
T ss_pred cCHhHHHHHHHHHHHHHH-HHHHhcCCCC
Confidence 66544 257899 9999999999
No 235
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=86.88 E-value=0.18 Score=40.82 Aligned_cols=73 Identities=8% Similarity=0.026 Sum_probs=51.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----C--CCeEEEe--c---cccC-C-CceEEEehhhhcCCChHHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----T--NNLEFFL--E---FEAI-P-PANVVLLKWILHDWSDEESLRYLKK 67 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~--~ri~~~~--~---~~~~-P-~~D~~ll~~vlh~~~de~~~~iL~~ 67 (132)
+..+++. +.+++.+|. +..++.|+. . -.|+|.. . .++. + .+|+|+...+||+.+|.+...-+.
T Consensus 81 ~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~- 157 (569)
T 4azs_A 81 SLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVK- 157 (569)
T ss_dssp HHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHH-
T ss_pred HHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHH-
Confidence 3445554 778999998 677887764 2 3578776 2 2233 3 399999999999999887665566
Q ss_pred HhhhhCCCCC
Q 043665 68 KCEESIPSND 77 (132)
Q Consensus 68 ~~~~al~~~g 77 (132)
++...+++++
T Consensus 158 ~~~~tl~~~~ 167 (569)
T 4azs_A 158 RLLSRLADVT 167 (569)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHhcccc
Confidence 6666666655
No 236
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=86.33 E-value=0.97 Score=34.52 Aligned_cols=46 Identities=15% Similarity=-0.052 Sum_probs=32.7
Q ss_pred HHHHHHHC-CCCeEEEeec-hhHHhhhcCCCCeEEEe--ccccCC--CceEEEeh
Q 043665 2 ARAIATAF-PDIKCIVLIC-LLWWIIWWGTNNLEFFL--EFEAIP--PANVVLLK 50 (132)
Q Consensus 2 ~~~l~~~~-P~l~~~v~Dl-p~v~~~a~~~~ri~~~~--~~~~~P--~~D~~ll~ 50 (132)
+..+++++ +..+++.+|+ |..++.+ .+++++. +++..+ .+|+++..
T Consensus 54 ~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~N 105 (421)
T 2ih2_A 54 LRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGN 105 (421)
T ss_dssp HHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEEC
T ss_pred HHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEEC
Confidence 44566666 6788999998 6666655 6888887 666433 49999984
No 237
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=85.95 E-value=0.92 Score=34.24 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=60.5
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CC-CeEEEe--ccccC------C-CceEEEehhh---------hcC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TN-NLEFFL--EFEAI------P-PANVVLLKWI---------LHD 55 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~-ri~~~~--~~~~~------P-~~D~~ll~~v---------lh~ 55 (132)
..+++. +.+++.+|. |..++.+++ .+ +++++. .++.. . .+|++++.-- +++
T Consensus 169 l~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~ 246 (332)
T 2igt_A 169 LVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQ 246 (332)
T ss_dssp HHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEE
T ss_pred HHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHH
Confidence 445554 338999998 778887765 23 588887 55421 2 4999988311 111
Q ss_pred CChHHHHHHHHHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHH----hCCCeee
Q 043665 56 WSDEESLRYLKKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFL----AAGFSHY 116 (132)
Q Consensus 56 ~~de~~~~iL~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~----~aGf~~~ 116 (132)
+ .+....+++ ++.+.|+|||-. ++........+.+++.++++ ++|+++.
T Consensus 247 ~-~~~~~~ll~-~~~~~LkpgG~l----------li~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 247 L-FDHLPLMLD-ICREILSPKALG----------LVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp H-HHHHHHHHH-HHHHTBCTTCCE----------EEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred H-HHHHHHHHH-HHHHhcCcCcEE----------EEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 1 234578999 999999999720 00011112234566666666 6788764
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=85.68 E-value=2 Score=31.79 Aligned_cols=61 Identities=16% Similarity=0.049 Sum_probs=41.7
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc-cCCCceEEEehhhhcCCChHHHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE-AIPPANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~-~~P~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
..++++ ..+++.+|+ |..++.+++ .++++++. +.+ +.+.+|+++. +.-+.|+.+....+|+
T Consensus 58 ~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~D~Vv~-n~py~~~~~~~~~ll~ 128 (299)
T 2h1r_A 58 VKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFDVCTA-NIPYKISSPLIFKLIS 128 (299)
T ss_dssp HHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCCSEEEE-ECCGGGHHHHHHHHHH
T ss_pred HHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccCCEEEE-cCCcccccHHHHHHHh
Confidence 445554 458999998 777777764 25788887 555 4556998876 6777788877777774
No 239
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=84.68 E-value=2.4 Score=32.90 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=18.4
Q ss_pred cCCHHHHHHHHHhCC-CeeeEEE
Q 043665 98 EGSVYDWKKLFLAAG-FSHYKIT 119 (132)
Q Consensus 98 ~rt~~e~~~ll~~aG-f~~~~~~ 119 (132)
.+|.+|++++++++| |++.++.
T Consensus 268 ~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 268 APSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp CCCHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCHHHHHHHHHHcCCceEEEEE
Confidence 489999999999985 8887653
No 240
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=82.56 E-value=0.73 Score=31.07 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=45.9
Q ss_pred HHHHHHHCCC---------CeEEEeechhHHhhhcCCCCeEEE-e--ccc-c--------CC--CceEEEehhhhcC---
Q 043665 2 ARAIATAFPD---------IKCIVLICLLWWIIWWGTNNLEFF-L--EFE-A--------IP--PANVVLLKWILHD--- 55 (132)
Q Consensus 2 ~~~l~~~~P~---------l~~~v~Dlp~v~~~a~~~~ri~~~-~--~~~-~--------~P--~~D~~ll~~vlh~--- 55 (132)
+..+++++|. .+++.+|+.... ..+++++. . +.+ + ++ .+|+++....+|.
T Consensus 37 ~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~ 112 (196)
T 2nyu_A 37 SQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGF 112 (196)
T ss_dssp HHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSC
T ss_pred HHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCC
Confidence 4567777765 789999986531 13467777 4 433 1 33 4999998544432
Q ss_pred C-ChHH-----HHHHHHHHhhhhCCCCC
Q 043665 56 W-SDEE-----SLRYLKKKCEESIPSND 77 (132)
Q Consensus 56 ~-~de~-----~~~iL~~~~~~al~~~g 77 (132)
| .|.. ...+|+ .+.+.|+|||
T Consensus 113 ~~~~~~~~~~~~~~~l~-~~~~~LkpgG 139 (196)
T 2nyu_A 113 RDLDHDRLISLCLTLLS-VTPDILQPGG 139 (196)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHEEEEE
T ss_pred cccCHHHHHHHHHHHHH-HHHHHhcCCC
Confidence 2 2221 147899 9999999997
No 241
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=81.96 E-value=0.93 Score=33.59 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=62.0
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCC--CceEEEehhhhcCCChHHHHHHHHHHhhh
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIP--PANVVLLKWILHDWSDEESLRYLKKKCEE 71 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~ 71 (132)
.+++ ....+++.+|+ |..++.++. .+++++.. .++-.+ .+|.+++.-. ..+...|. .+.+
T Consensus 142 ~~a~-~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p------~~~~~~l~-~a~~ 213 (278)
T 3k6r_A 142 PIAV-YGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV------VRTHEFIP-KALS 213 (278)
T ss_dssp HHHH-HTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC------SSGGGGHH-HHHH
T ss_pred HHHH-hcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC------CcHHHHHH-HHHH
Confidence 3444 45678999998 778887765 67898887 555333 4998887422 12456788 8888
Q ss_pred hCCCCCCCCcchhhhhhhhhhc-CCCccCCHHHHHHHHHhCCCeee
Q 043665 72 SIPSNDEGRKTQLCFDLLMATF-LNGKEGSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 72 al~~~g~~~~~~~~~dl~m~~~-~~g~~rt~~e~~~ll~~aGf~~~ 116 (132)
.+++||- .-++..+. ........+.++++.++.|+++.
T Consensus 214 ~lk~gG~-------ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 214 IAKDGAI-------IHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp HEEEEEE-------EEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred HcCCCCE-------EEEEeeecccccchhHHHHHHHHHHHcCCcEE
Confidence 8998861 00000010 11223456788899999999864
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=81.79 E-value=0.99 Score=35.84 Aligned_cols=74 Identities=9% Similarity=0.053 Sum_probs=47.5
Q ss_pred HHHHHHCC-CCeEEEeec-hhHHhhhcC------CCCeEEEe--ccc---cCCC-ceEEEeh-------------hhhcC
Q 043665 3 RAIATAFP-DIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFE---AIPP-ANVVLLK-------------WILHD 55 (132)
Q Consensus 3 ~~l~~~~P-~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~---~~P~-~D~~ll~-------------~vlh~ 55 (132)
..+++..+ .-+++.+|+ +..++.+++ ..+|.++. ..+ ..++ +|+|++- .+...
T Consensus 121 ~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~ 200 (456)
T 3m4x_A 121 TQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKE 200 (456)
T ss_dssp HHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHH
T ss_pred HHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhh
Confidence 45666655 468999998 667766654 35677775 322 2343 9999972 12223
Q ss_pred CChHHH-------HHHHHHHhhhhCCCCC
Q 043665 56 WSDEES-------LRYLKKKCEESIPSND 77 (132)
Q Consensus 56 ~~de~~-------~~iL~~~~~~al~~~g 77 (132)
|+.++. .++|+ ++.+.|+|||
T Consensus 201 ~~~~~~~~l~~~Q~~iL~-~a~~~LkpGG 228 (456)
T 3m4x_A 201 WTEESPLYCQKRQQEILS-SAIKMLKNKG 228 (456)
T ss_dssp CCTTHHHHHHHHHHHHHH-HHHHTEEEEE
T ss_pred cCHHHHHHHHHHHHHHHH-HHHHhcCCCc
Confidence 433322 38899 9999999998
No 243
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.18 E-value=18 Score=29.78 Aligned_cols=107 Identities=16% Similarity=0.017 Sum_probs=68.3
Q ss_pred CCeEEEeechhHHhhhcC------------------------------CCCeEEEe--ccc--c-----------CCC-c
Q 043665 11 DIKCIVLICLLWWIIWWG------------------------------TNNLEFFL--EFE--A-----------IPP-A 44 (132)
Q Consensus 11 ~l~~~v~Dlp~v~~~a~~------------------------------~~ri~~~~--~~~--~-----------~P~-~ 44 (132)
++++.=+|+|.+++.=.+ .++..+++ +.+ . -|. -
T Consensus 139 ~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~p 218 (695)
T 2zwa_A 139 RVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVV 218 (695)
T ss_dssp SEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEE
T ss_pred CCEEEECccHHHHHHHHHHHHcChHHHHhhccccccccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCC
Confidence 678888999999874221 14888888 554 1 123 3
Q ss_pred eEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC-----C--CC-cchhhhhhhhhhc-------CC--CccCCHHHHHHH
Q 043665 45 NVVLLKWILHDWSDEESLRYLKKKCEESIPSND-----E--GR-KTQLCFDLLMATF-------LN--GKEGSVYDWKKL 107 (132)
Q Consensus 45 D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g-----~--~~-~~~~~~dl~m~~~-------~~--g~~rt~~e~~~l 107 (132)
-+++.--+|.+++.+.+.++|+ .+.. + +++ + .+ .....+.-.|+.+ .. ....+.++..+.
T Consensus 219 tl~i~Egvl~Yl~~~~~~~ll~-~~~~-~-~~~~~~~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~ 295 (695)
T 2zwa_A 219 KVFVAEVSLAYMKPERSDSIIE-ATSK-M-ENSHFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQR 295 (695)
T ss_dssp EEEEEESSGGGSCHHHHHHHHH-HHHT-S-SSEEEEEEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHH
T ss_pred EEEeeeeEEEEcCHHHHHHHHH-HHhh-C-CCceEEEEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHH
Confidence 4667789999999999999999 9884 4 444 1 01 0011111112111 11 134579999999
Q ss_pred HHhCCCeeeEEEe
Q 043665 108 FLAAGFSHYKITP 120 (132)
Q Consensus 108 l~~aGf~~~~~~~ 120 (132)
|.++||+.+....
T Consensus 296 ~~~~Gw~~v~~~~ 308 (695)
T 2zwa_A 296 FNKLGFAYVNVGD 308 (695)
T ss_dssp HHHTTCCEEEEEE
T ss_pred HHHCCCCCcceee
Confidence 9999998766554
No 244
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=79.86 E-value=1.6 Score=32.52 Aligned_cols=95 Identities=5% Similarity=-0.064 Sum_probs=60.4
Q ss_pred HHHHCC-CCeEEEeechhHHhhhcCCCCeEE-Ee--ccc-cCC-CceEEEehhhhcCC----------ChHHHHHHHHHH
Q 043665 5 IATAFP-DIKCIVLICLLWWIIWWGTNNLEF-FL--EFE-AIP-PANVVLLKWILHDW----------SDEESLRYLKKK 68 (132)
Q Consensus 5 l~~~~P-~l~~~v~Dlp~v~~~a~~~~ri~~-~~--~~~-~~P-~~D~~ll~~vlh~~----------~de~~~~iL~~~ 68 (132)
+++..| +.+++.+|+-..+ +++++ +. +.+ +.+ .+|+++.... +.+ ..+....+|+ .
T Consensus 85 ~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~-~~~~g~~~~d~~~~~~l~~~~l~-~ 156 (290)
T 2xyq_A 85 LRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMY-DPRTKHVTKENDSKEGFFTYLCG-F 156 (290)
T ss_dssp HHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCC-CCC---CCSCCCCCCTHHHHHHH-H
T ss_pred HHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCC-ccccccccccccchHHHHHHHHH-H
Confidence 455666 6889999985542 46777 76 655 344 4999997422 111 1233568999 9
Q ss_pred hhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 69 CEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 69 ~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
+++.|+|||- ..+. ...+ ....++.+++++.||..+++.
T Consensus 157 a~r~LkpGG~-----~v~~-----~~~~--~~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 157 IKQKLALGGS-----IAVK-----ITEH--SWNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHHEEEEEE-----EEEE-----ECSS--SCCHHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCcE-----EEEE-----Eecc--CCHHHHHHHHHHcCCcEEEEE
Confidence 9999999972 1110 0111 123588899999999877665
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=78.49 E-value=1.6 Score=33.48 Aligned_cols=72 Identities=11% Similarity=-0.032 Sum_probs=47.5
Q ss_pred HHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe--cccc---C---C-CceEEEehhhhcCCCh-------H
Q 043665 4 AIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEA---I---P-PANVVLLKWILHDWSD-------E 59 (132)
Q Consensus 4 ~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~---~---P-~~D~~ll~~vlh~~~d-------e 59 (132)
.+++. +..+++.+|. |..++.+++ .++++++. .++. . + .+|++++.--....+. +
T Consensus 234 ~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~ 312 (396)
T 2as0_A 234 HAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLR 312 (396)
T ss_dssp HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHH
T ss_pred HHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHH
Confidence 44443 4558999998 778887765 23888887 4442 1 2 4999998321111111 4
Q ss_pred HHHHHHHHHhhhhCCCCC
Q 043665 60 ESLRYLKKKCEESIPSND 77 (132)
Q Consensus 60 ~~~~iL~~~~~~al~~~g 77 (132)
....+++ ++.+.|+|||
T Consensus 313 ~~~~~l~-~~~~~LkpgG 329 (396)
T 2as0_A 313 AYFNVNF-AGLNLVKDGG 329 (396)
T ss_dssp HHHHHHH-HHHTTEEEEE
T ss_pred HHHHHHH-HHHHhcCCCc
Confidence 5678889 9999999986
No 246
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=77.09 E-value=18 Score=27.71 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=65.8
Q ss_pred CCCCeEEEeechh-----HHhhhcC---CCCeEE---Ee--ccc-cCCC--ceEEEehhhhcCCCh--------------
Q 043665 9 FPDIKCIVLICLL-----WWIIWWG---TNNLEF---FL--EFE-AIPP--ANVVLLKWILHDWSD-------------- 58 (132)
Q Consensus 9 ~P~l~~~v~Dlp~-----v~~~a~~---~~ri~~---~~--~~~-~~P~--~D~~ll~~vlh~~~d-------------- 58 (132)
.|++++..-|||. +-..... ..+-.| ++ |+. -+|. .|+++.+..||=.++
T Consensus 89 ~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~ 168 (359)
T 1m6e_X 89 SPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYM 168 (359)
T ss_dssp CCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSS
T ss_pred CCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEe
Confidence 6888899999985 1111111 112233 33 777 5673 999999999985443
Q ss_pred -----------------HHHHHHHHHHhhhhCCCCC--------CCCc------chhhhhhhh-----hhc---------
Q 043665 59 -----------------EESLRYLKKKCEESIPSND--------EGRK------TQLCFDLLM-----ATF--------- 93 (132)
Q Consensus 59 -----------------e~~~~iL~~~~~~al~~~g--------~~~~------~~~~~dl~m-----~~~--------- 93 (132)
.+-..+|+ ..++.|+||| .... ....+++.- |+.
T Consensus 169 ~~~~p~~v~~ay~~Qf~~D~~~FL~-~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~ 247 (359)
T 1m6e_X 169 ANTCPQSVLNAYYKQFQEDHALFLR-CRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKM 247 (359)
T ss_dssp CSSSCCTTSCCSHHHHHHHHHHHHH-HHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTT
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhh
Confidence 12345688 8899999999 1110 111222111 110
Q ss_pred ----CCCccCCHHHHHHHHHhCC-CeeeEE
Q 043665 94 ----LNGKEGSVYDWKKLFLAAG-FSHYKI 118 (132)
Q Consensus 94 ----~~g~~rt~~e~~~ll~~aG-f~~~~~ 118 (132)
.--..+|.+|++++++++| |++.++
T Consensus 248 d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 248 DKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp GGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred hccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 1124588999999999996 477654
No 247
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=75.48 E-value=4.7 Score=30.00 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=36.7
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC-----CCCeEEEe--ccc-c--C-----CCceEEEe
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG-----TNNLEFFL--EFE-A--I-----PPANVVLL 49 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~-----~~ri~~~~--~~~-~--~-----P~~D~~ll 49 (132)
+..+++++|+.+++.+|. |..++.+++ .+|++++. |.+ + + ..+|.+++
T Consensus 41 s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 41 SRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILM 104 (301)
T ss_dssp HHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEE
T ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEE
Confidence 567889999999999998 788888775 36899998 433 1 1 34898886
No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=74.82 E-value=3.9 Score=30.36 Aligned_cols=64 Identities=14% Similarity=-0.090 Sum_probs=38.4
Q ss_pred eEEEeec-----hhHHhhhcC----CCCeEEEe-c-cccCC--CceEEEehhhhc---CCChHH-HHHHHHHHhhhhCCC
Q 043665 13 KCIVLIC-----LLWWIIWWG----TNNLEFFL-E-FEAIP--PANVVLLKWILH---DWSDEE-SLRYLKKKCEESIPS 75 (132)
Q Consensus 13 ~~~v~Dl-----p~v~~~a~~----~~ri~~~~-~-~~~~P--~~D~~ll~~vlh---~~~de~-~~~iL~~~~~~al~~ 75 (132)
+++.+|+ +..++.... .++|.++. + +..+| .+|+|+.....+ .+.|.. ...+|+ .+++.|+|
T Consensus 105 ~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~-~~~~~Lkp 183 (305)
T 2p41_A 105 NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIGESSPNPTVEAGRTLRVLN-LVENWLSN 183 (305)
T ss_dssp TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHH-HHHHHCCT
T ss_pred CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECCccccCcchhhHHHHHHHHH-HHHHHhCC
Confidence 5777787 543332221 25677776 2 22233 499999865443 222322 336888 99999999
Q ss_pred CC
Q 043665 76 ND 77 (132)
Q Consensus 76 ~g 77 (132)
||
T Consensus 184 GG 185 (305)
T 2p41_A 184 NT 185 (305)
T ss_dssp TC
T ss_pred CC
Confidence 99
No 249
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=74.21 E-value=0.77 Score=43.60 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=26.5
Q ss_pred ceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC-----CCCcchhhhhhh-h-hhc---CCCccCCHHHHHHHHHhCCC
Q 043665 44 ANVVLLKWILHDWSDEESLRYLKKKCEESIPSND-----EGRKTQLCFDLL-M-ATF---LNGKEGSVYDWKKLFLAAGF 113 (132)
Q Consensus 44 ~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g-----~~~~~~~~~dl~-m-~~~---~~g~~rt~~e~~~ll~~aGf 113 (132)
||+++.+++||.-++ ....|+ ++++.|+||| +... ...+... - +.. .++...+.++|.++|+++||
T Consensus 1312 ydlvia~~vl~~t~~--~~~~l~-~~~~lL~p~G~l~~~e~~~-~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1312 ADLLVCNCALATLGD--PAVAVG-NMAATLKEGGFLLLHTLLA-GHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp CCEEEEECC-----------------------CCEEEEEEC---------------------------CTTTTSSTTTTE
T ss_pred eeEEEEccccccccc--HHHHHH-HHHHhcCCCcEEEEEeccc-cccccccccccccccccCCcccCHHHHHHHHHhCCC
Confidence 899999999996655 356799 9999999999 1110 0000000 0 000 01233567799999999999
Q ss_pred eeeEEE
Q 043665 114 SHYKIT 119 (132)
Q Consensus 114 ~~~~~~ 119 (132)
....+.
T Consensus 1388 ~~~~~~ 1393 (2512)
T 2vz8_A 1388 HLVALK 1393 (2512)
T ss_dssp EEEEEE
T ss_pred ceeeec
Confidence 987654
No 250
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=72.56 E-value=2.6 Score=30.95 Aligned_cols=63 Identities=14% Similarity=-0.011 Sum_probs=39.3
Q ss_pred CeEEEeechhHHhhhcC--CC------CeEEE--e--ccccCC--CceEEEehhhhcCCC----hHH-HHHHHHHHhhhh
Q 043665 12 IKCIVLICLLWWIIWWG--TN------NLEFF--L--EFEAIP--PANVVLLKWILHDWS----DEE-SLRYLKKKCEES 72 (132)
Q Consensus 12 l~~~v~Dlp~v~~~a~~--~~------ri~~~--~--~~~~~P--~~D~~ll~~vlh~~~----de~-~~~iL~~~~~~a 72 (132)
-+++.+|+-.....+.+ .. +++++ . +.+ +| .+|+++.... +..+ |.. ...+|+ .+.+.
T Consensus 104 ~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~-~~~r~ 180 (276)
T 2wa2_A 104 PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTK-MEPFQADTVLCDIG-ESNPTAAVEASRTLTVLN-VISRW 180 (276)
T ss_dssp TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGG-CCCCCCSEEEECCC-CCCSCHHHHHHHHHHHHH-HHHHH
T ss_pred CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhh-CCCCCcCEEEECCC-cCCCchhhhHHHHHHHHH-HHHHH
Confidence 57888998555433322 11 67777 4 443 33 3999998655 3221 222 235888 99999
Q ss_pred CCCCC
Q 043665 73 IPSND 77 (132)
Q Consensus 73 l~~~g 77 (132)
|+|||
T Consensus 181 LkpGG 185 (276)
T 2wa2_A 181 LEYNQ 185 (276)
T ss_dssp HHHST
T ss_pred hccCC
Confidence 99998
No 251
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=72.46 E-value=3.7 Score=31.67 Aligned_cols=74 Identities=5% Similarity=-0.018 Sum_probs=44.8
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC--C------------CCeEEEe--cc---ccC---C-CceEEEehhhh-c-C
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG--T------------NNLEFFL--EF---EAI---P-PANVVLLKWIL-H-D 55 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~------------~ri~~~~--~~---~~~---P-~~D~~ll~~vl-h-~ 55 (132)
+..+++ +|..+++++|+ |.+++.+++ . +|++++. .+ ... . .||+|++---- . .
T Consensus 203 arellk-~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~ 281 (364)
T 2qfm_A 203 LCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIS 281 (364)
T ss_dssp HHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCC
T ss_pred HHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccC
Confidence 345555 44478999999 889998875 1 2788886 33 321 2 49999984211 0 0
Q ss_pred CCh--HHHHHHHHHHh----hhhCCCCC
Q 043665 56 WSD--EESLRYLKKKC----EESIPSND 77 (132)
Q Consensus 56 ~~d--e~~~~iL~~~~----~~al~~~g 77 (132)
... -...+.++ .+ +++|+|||
T Consensus 282 ~~p~~L~t~eFy~-~~~~~~~~~L~pgG 308 (364)
T 2qfm_A 282 TSPEEDSTWEFLR-LILDLSMKVLKQDG 308 (364)
T ss_dssp CC----CHHHHHH-HHHHHHHHTEEEEE
T ss_pred cCchhhhHHHHHH-HHHHHHHhhCCCCc
Confidence 001 11244455 54 89999998
No 252
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=72.39 E-value=4.5 Score=30.93 Aligned_cols=65 Identities=6% Similarity=0.054 Sum_probs=43.2
Q ss_pred CeEEEeec-hhHHhhhcC-------CC-CeEEEe--cccc---C---C-CceEEEehhhh-----cCCC--hHHHHHHHH
Q 043665 12 IKCIVLIC-LLWWIIWWG-------TN-NLEFFL--EFEA---I---P-PANVVLLKWIL-----HDWS--DEESLRYLK 66 (132)
Q Consensus 12 l~~~v~Dl-p~v~~~a~~-------~~-ri~~~~--~~~~---~---P-~~D~~ll~~vl-----h~~~--de~~~~iL~ 66 (132)
-+++.+|. |..++.+++ .+ +++++. .++. . . .+|++++.--. +... -+.-.++++
T Consensus 236 ~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~ 315 (385)
T 2b78_A 236 MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIR 315 (385)
T ss_dssp SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHH
Confidence 37999998 778887765 23 899888 5442 1 2 49999983211 1221 123456888
Q ss_pred HHhhhhCCCCC
Q 043665 67 KKCEESIPSND 77 (132)
Q Consensus 67 ~~~~~al~~~g 77 (132)
.+...|+|||
T Consensus 316 -~~~~~L~pgG 325 (385)
T 2b78_A 316 -QGLEILSENG 325 (385)
T ss_dssp -HHHHTEEEEE
T ss_pred -HHHHhcCCCc
Confidence 8899999987
No 253
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=72.17 E-value=2.8 Score=34.72 Aligned_cols=66 Identities=12% Similarity=0.040 Sum_probs=47.6
Q ss_pred CCeEEEeechhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 11 DIKCIVLICLLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 11 ~l~~~v~Dlp~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
++++..++-......+.+ .++|+++. +.+ .+|+ +|+++.-+.=...-.|....+|- ...+-|+|||
T Consensus 385 ~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~-Ardr~LKPgG 461 (637)
T 4gqb_A 385 RIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLD-GAQHFLKDDG 461 (637)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHH-HHGGGEEEEE
T ss_pred CcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHH-HHHHhcCCCc
Confidence 445666776555555543 78999998 766 6785 99998766554445566778888 8888999999
No 254
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=72.11 E-value=2.8 Score=31.95 Aligned_cols=72 Identities=7% Similarity=-0.085 Sum_probs=47.1
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--cccc---C---C-CceEEEehhhhcCCCh-------H
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEA---I---P-PANVVLLKWILHDWSD-------E 59 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~---~---P-~~D~~ll~~vlh~~~d-------e 59 (132)
..+++. ..+++.+|. |..++.++. .++++++. .++. . + .+|++++.---...+. +
T Consensus 225 ~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~ 302 (382)
T 1wxx_A 225 LHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYR 302 (382)
T ss_dssp HHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHH
T ss_pred HHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHH
Confidence 344554 567899998 778887775 23488887 4432 1 3 4999998321111111 4
Q ss_pred HHHHHHHHHhhhhCCCCC
Q 043665 60 ESLRYLKKKCEESIPSND 77 (132)
Q Consensus 60 ~~~~iL~~~~~~al~~~g 77 (132)
....+++ ++.+.|+|||
T Consensus 303 ~~~~~l~-~~~~~LkpgG 319 (382)
T 1wxx_A 303 AYKEVNL-RAIKLLKEGG 319 (382)
T ss_dssp HHHHHHH-HHHHTEEEEE
T ss_pred HHHHHHH-HHHHhcCCCC
Confidence 4577899 9999999987
No 255
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=72.05 E-value=2.7 Score=30.61 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=38.9
Q ss_pred CeEEEeechhHHhhhcC--CC------CeEEE--e--ccccCC--CceEEEehhh--hcCCC-h-HHHHHHHHHHhhhhC
Q 043665 12 IKCIVLICLLWWIIWWG--TN------NLEFF--L--EFEAIP--PANVVLLKWI--LHDWS-D-EESLRYLKKKCEESI 73 (132)
Q Consensus 12 l~~~v~Dlp~v~~~a~~--~~------ri~~~--~--~~~~~P--~~D~~ll~~v--lh~~~-d-e~~~~iL~~~~~~al 73 (132)
-+++.+|+-..+..+.+ .. ++.++ . +++ +| .+|+++.... ..+|. | .....+|+ .+.+.|
T Consensus 96 ~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~-l~~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~-~~~r~L 173 (265)
T 2oxt_A 96 PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHT-LPVERTDVIMCDVGESSPKWSVESERTIKILE-LLEKWK 173 (265)
T ss_dssp TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTT-SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHH-HHHHHH
T ss_pred CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhH-CCCCCCcEEEEeCcccCCccchhHHHHHHHHH-HHHHHh
Confidence 57888998555333322 11 67777 4 443 33 3999998654 21221 1 11235888 999999
Q ss_pred CCCC
Q 043665 74 PSND 77 (132)
Q Consensus 74 ~~~g 77 (132)
+|||
T Consensus 174 kpGG 177 (265)
T 2oxt_A 174 VKNP 177 (265)
T ss_dssp HHCT
T ss_pred ccCC
Confidence 9998
No 256
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=70.41 E-value=13 Score=26.24 Aligned_cols=62 Identities=6% Similarity=-0.032 Sum_probs=39.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYL 65 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL 65 (132)
+..++++. .+++.+|. |..++.+++ .++++++. +.+ +++. .+..+++|.-++++......++
T Consensus 45 t~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~vv~nlPy~~~~~~l~~~l 115 (244)
T 1qam_A 45 TLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIV 115 (244)
T ss_dssp HHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeEEEEeCCcccCHHHHHHHH
Confidence 34566665 68999998 778877765 36899887 555 4552 3445666666655544444444
No 257
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=70.15 E-value=5.9 Score=29.61 Aligned_cols=61 Identities=10% Similarity=0.010 Sum_probs=44.4
Q ss_pred CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
...+++.+|+ |..++.+++ .++++++. .++....+|++++.- + .....+++ .+.+.|+|||
T Consensus 215 ~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dp-----P-~~~~~~l~-~~~~~L~~gG 285 (336)
T 2yx1_A 215 NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNL-----P-KFAHKFID-KALDIVEEGG 285 (336)
T ss_dssp TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECC-----T-TTGGGGHH-HHHHHEEEEE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECC-----c-HhHHHHHH-HHHHHcCCCC
Confidence 5678999998 888888775 36899887 555444599999841 1 11237888 8888998875
No 258
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=69.34 E-value=3.8 Score=28.04 Aligned_cols=91 Identities=15% Similarity=0.119 Sum_probs=47.7
Q ss_pred CCeEEEeechhHHhhhcCCCCeEEEe--cccc---------C-----CCceEEEehhhh---cCC------ChHHHHHHH
Q 043665 11 DIKCIVLICLLWWIIWWGTNNLEFFL--EFEA---------I-----PPANVVLLKWIL---HDW------SDEESLRYL 65 (132)
Q Consensus 11 ~l~~~v~Dlp~v~~~a~~~~ri~~~~--~~~~---------~-----P~~D~~ll~~vl---h~~------~de~~~~iL 65 (132)
..+++.+|+-.. ....+++++. +.+. + ..+|+|+..--. -.| .-+.+..+|
T Consensus 47 ~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l 122 (191)
T 3dou_A 47 ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVM 122 (191)
T ss_dssp CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHH
Confidence 445555555322 1134777776 5542 1 258998873211 111 113346788
Q ss_pred HHHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEE
Q 043665 66 KKKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 66 ~~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
+ .+.+.|+|||.. . +..+.|.. ..++...+++ .|+.+++.
T Consensus 123 ~-~a~~~LkpGG~l-----v-----~k~~~~~~--~~~~~~~l~~-~F~~v~~~ 162 (191)
T 3dou_A 123 E-IAVRYLRNGGNV-----L-----LKQFQGDM--TNDFIAIWRK-NFSSYKIS 162 (191)
T ss_dssp H-HHHHHEEEEEEE-----E-----EEEECSTH--HHHHHHHHGG-GEEEEEEE
T ss_pred H-HHHHHccCCCEE-----E-----EEEcCCCC--HHHHHHHHHH-hcCEEEEE
Confidence 8 899999999720 0 00112221 3466666644 57776653
No 259
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=64.53 E-value=29 Score=26.60 Aligned_cols=65 Identities=6% Similarity=-0.134 Sum_probs=43.6
Q ss_pred CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC-CceEEEehhhhc-CC-ChHHHHHHHHHHhhhhCCC
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP-PANVVLLKWILH-DW-SDEESLRYLKKKCEESIPS 75 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P-~~D~~ll~~vlh-~~-~de~~~~iL~~~~~~al~~ 75 (132)
++.+++.+|. |.+++.|+. .++|++.. +++ +.+ .+|++++.-=.+ .. ++++...+.+ .+.+.|++
T Consensus 255 ~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~-~lg~~lk~ 333 (384)
T 3ldg_A 255 IQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYN-EMGETFAP 333 (384)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHH-HHHHHHTT
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHH-HHHHHHhh
Confidence 3467999998 778888875 45799988 665 333 499988752111 12 3355677777 77777765
No 260
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=64.35 E-value=40 Score=25.99 Aligned_cols=98 Identities=13% Similarity=0.022 Sum_probs=56.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--cccc-----CC--CceEEEehhhhcCCChHHHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEA-----IP--PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~-----~P--~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
..+++. ..+++.+|. |..++.|+. .++++|+. .++. ++ .+|++++ |-+-..+..+++
T Consensus 302 ~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~-----dPPr~g~~~~~~ 374 (433)
T 1uwv_A 302 LPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL-----DPARAGAAGVMQ 374 (433)
T ss_dssp HHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE-----CCCTTCCHHHHH
T ss_pred HHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE-----CCCCccHHHHHH
Confidence 445554 678999998 778887765 35899988 5442 22 3899987 333222234555
Q ss_pred HHhhhhCCCCCCCCcchhhhhhhhhhcCCCccCCHHHHHHHHHhCCCeeeEEEecC
Q 043665 67 KKCEESIPSNDEGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLAAGFSHYKITPNL 122 (132)
Q Consensus 67 ~~~~~al~~~g~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 122 (132)
.+.. ++|++ . ..+.++.. |...-..+|.+.||++.++.+..
T Consensus 375 -~l~~-~~p~~-------i----vyvsc~p~--tlard~~~l~~~Gy~~~~~~~~d 415 (433)
T 1uwv_A 375 -QIIK-LEPIR-------I----VYVSCNPA--TLARDSEALLKAGYTIARLAMLD 415 (433)
T ss_dssp -HHHH-HCCSE-------E----EEEESCHH--HHHHHHHHHHHTTCEEEEEEEEC
T ss_pred -HHHh-cCCCe-------E----EEEECChH--HHHhhHHHHHHCCcEEEEEEEec
Confidence 5543 34432 0 00112211 12223456677899998877653
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=61.32 E-value=10 Score=29.21 Aligned_cols=65 Identities=9% Similarity=-0.093 Sum_probs=41.6
Q ss_pred CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCC-CceEEEehhhhcC-CC-hHHHHHHHHHHhhhhCCC
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIP-PANVVLLKWILHD-WS-DEESLRYLKKKCEESIPS 75 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P-~~D~~ll~~vlh~-~~-de~~~~iL~~~~~~al~~ 75 (132)
+..+++.+|. |.+++.|+. .++|+++. +++ +.+ .+|++++.-=.+. .. +++...+.+ .+.+.|++
T Consensus 262 ~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~-~lg~~lk~ 340 (393)
T 3k0b_A 262 QPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYR-EMGIVYKR 340 (393)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHH-HHHHHHHT
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHH-HHHHHHhc
Confidence 4467999998 788888875 45788887 665 334 4999888522111 12 244556666 66666654
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=59.69 E-value=9.3 Score=26.91 Aligned_cols=72 Identities=6% Similarity=-0.006 Sum_probs=45.0
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCCC-ceEEEehhhhcCCChHHHHHHH--------
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIPP-ANVVLLKWILHDWSDEESLRYL-------- 65 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P~-~D~~ll~~vlh~~~de~~~~iL-------- 65 (132)
..++++. .+++.+|+ |..++.+++ .++++++. +.+ +++. ....+++|.-++.++.....++
T Consensus 45 ~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~ 122 (245)
T 1yub_A 45 TKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDI 122 (245)
T ss_dssp HHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEEEEEEECCSSSCHHHHHHHHHHCCCEEE
T ss_pred HHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCcEEEEeCCccccHHHHHHHHhCCCCCeE
Confidence 4555554 67888898 667777665 35788877 544 4442 2335566666666655555554
Q ss_pred ------HHHhhhhCCCCC
Q 043665 66 ------KKKCEESIPSND 77 (132)
Q Consensus 66 ------~~~~~~al~~~g 77 (132)
+ .+.+.|+|||
T Consensus 123 ~lm~q~e-~a~rll~~~G 139 (245)
T 1yub_A 123 YLIVEEG-FYKRTLDIHR 139 (245)
T ss_dssp EEEEESS-HHHHHHCGGG
T ss_pred EEEeeHH-HHHHHhCCCC
Confidence 4 5677778887
No 263
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=58.93 E-value=7.1 Score=29.77 Aligned_cols=72 Identities=8% Similarity=-0.134 Sum_probs=47.2
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------C-C-CeEEEe--cccc---C---C-CceEEEehhh--------hcCC
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------T-N-NLEFFL--EFEA---I---P-PANVVLLKWI--------LHDW 56 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~-~-ri~~~~--~~~~---~---P-~~D~~ll~~v--------lh~~ 56 (132)
..+++.. ..+++.+|. |..++.+++ - + +++++. .++. . + .+|++++.-- +++.
T Consensus 236 l~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~ 314 (396)
T 3c0k_A 236 VSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGA 314 (396)
T ss_dssp HHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCC
T ss_pred HHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHH
Confidence 3445432 458999998 778887765 2 3 788887 4442 1 2 4999998421 1111
Q ss_pred ChHHHHHHHHHHhhhhCCCCC
Q 043665 57 SDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 57 ~de~~~~iL~~~~~~al~~~g 77 (132)
. +....++. ++.+.|+|||
T Consensus 315 ~-~~~~~~l~-~~~~~LkpgG 333 (396)
T 3c0k_A 315 C-RGYKDINM-LAIQLLNEGG 333 (396)
T ss_dssp C-THHHHHHH-HHHHTEEEEE
T ss_pred H-HHHHHHHH-HHHHhcCCCc
Confidence 1 34678888 8999999986
No 264
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=56.26 E-value=14 Score=20.97 Aligned_cols=20 Identities=10% Similarity=0.019 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHhCCCeeeEE
Q 043665 99 GSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 99 rt~~e~~~ll~~aGf~~~~~ 118 (132)
.+..|+..+|+++||...+.
T Consensus 5 ~~~~elik~L~~~G~~~~r~ 24 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMA 24 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCC
Confidence 57889999999999997653
No 265
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=50.99 E-value=26 Score=25.82 Aligned_cols=62 Identities=16% Similarity=0.085 Sum_probs=40.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC----CCCeEEEe--ccc-cCCC--ceEEEehhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG----TNNLEFFL--EFE-AIPP--ANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~----~~ri~~~~--~~~-~~P~--~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
+..|+++ ..+++.+|+ |..++.+++ .++++++. +.+ +++. +|+++ +|.-.+++..-..++|+
T Consensus 65 T~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv-~NlPy~is~pil~~lL~ 136 (295)
T 3gru_A 65 TEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVV-ANLPYQISSPITFKLIK 136 (295)
T ss_dssp HHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEE-EECCGGGHHHHHHHHHH
T ss_pred HHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEE-EeCcccccHHHHHHHHh
Confidence 3455655 468899998 677777765 47899988 665 5553 89877 45555565554444443
No 266
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=50.03 E-value=13 Score=28.53 Aligned_cols=71 Identities=8% Similarity=-0.045 Sum_probs=42.4
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC-------CCCeEEEe-ccc---cCC-CceEEEehhhhcCCCh-------HHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG-------TNNLEFFL-EFE---AIP-PANVVLLKWILHDWSD-------EESL 62 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~-~~~---~~P-~~D~~ll~~vlh~~~d-------e~~~ 62 (132)
..+++. +.+++.+|+ |..++.+++ ..++. .. .++ ..+ .+|++++.--....+. ..-.
T Consensus 230 l~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~-~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~ 306 (393)
T 4dmg_A 230 LRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIR-HGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLV 306 (393)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE-ESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHH
T ss_pred HHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE-EccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHH
Confidence 344544 445999998 677877765 33444 33 444 223 3999987421111111 2335
Q ss_pred HHHHHHhhhhCCCCC
Q 043665 63 RYLKKKCEESIPSND 77 (132)
Q Consensus 63 ~iL~~~~~~al~~~g 77 (132)
++++ .+.+.|+|||
T Consensus 307 ~ll~-~a~~~LkpGG 320 (393)
T 4dmg_A 307 DLVR-EALRLLAEEG 320 (393)
T ss_dssp HHHH-HHHHTEEEEE
T ss_pred HHHH-HHHHhcCCCC
Confidence 7888 8999999987
No 267
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=49.15 E-value=42 Score=25.69 Aligned_cols=35 Identities=6% Similarity=-0.106 Sum_probs=27.6
Q ss_pred HHHHHHH-CCCCeEEEeec-hhHHhhhcC--CCCeEEEe
Q 043665 2 ARAIATA-FPDIKCIVLIC-LLWWIIWWG--TNNLEFFL 36 (132)
Q Consensus 2 ~~~l~~~-~P~l~~~v~Dl-p~v~~~a~~--~~ri~~~~ 36 (132)
+..|+++ .|+.+.+.+|. |..++.++. .+|++++.
T Consensus 72 S~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~ 110 (347)
T 3tka_A 72 SRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIH 110 (347)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEE
T ss_pred HHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEe
Confidence 3567777 48899999999 778887754 57898887
No 268
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=48.56 E-value=24 Score=21.08 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=18.3
Q ss_pred CCHHHHHHHHH----hCCCeeeEEEecC
Q 043665 99 GSVYDWKKLFL----AAGFSHYKITPNL 122 (132)
Q Consensus 99 rt~~e~~~ll~----~aGf~~~~~~~~~ 122 (132)
+|.+|-..+.+ ++||.+.+|+|-.
T Consensus 54 ~sLdEAlE~AE~eYeeaGF~V~RVRPev 81 (84)
T 2lmc_A 54 ETLDEALELAEWQYVPAGFEVTRVRPCV 81 (84)
T ss_dssp SSHHHHHHHHHHTTGGGTCEEEEEEEEC
T ss_pred ccHHHHHHHHHHHhhhccceEEEecccc
Confidence 67776666555 7899999999853
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=47.48 E-value=29 Score=28.79 Aligned_cols=65 Identities=5% Similarity=-0.014 Sum_probs=44.5
Q ss_pred CeEEEeec-hhHHhhhcC-------C-CCeEEEe--cccc---CC-CceEEEehhhh--------cCCC-hHHHHHHHHH
Q 043665 12 IKCIVLIC-LLWWIIWWG-------T-NNLEFFL--EFEA---IP-PANVVLLKWIL--------HDWS-DEESLRYLKK 67 (132)
Q Consensus 12 l~~~v~Dl-p~v~~~a~~-------~-~ri~~~~--~~~~---~P-~~D~~ll~~vl--------h~~~-de~~~~iL~~ 67 (132)
-+++.+|+ |..++.+++ . ++++++. .++. .. .+|+|++.--- +.|. ...-.++++
T Consensus 563 ~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~- 641 (703)
T 3v97_A 563 RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMK- 641 (703)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHH-
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHH-
Confidence 46999998 678887765 2 5899987 5552 23 49999983211 1121 234678899
Q ss_pred HhhhhCCCCC
Q 043665 68 KCEESIPSND 77 (132)
Q Consensus 68 ~~~~al~~~g 77 (132)
.+.+.|+|||
T Consensus 642 ~a~~~LkpgG 651 (703)
T 3v97_A 642 DLKRLLRAGG 651 (703)
T ss_dssp HHHHHEEEEE
T ss_pred HHHHhcCCCc
Confidence 9999999987
No 270
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=47.45 E-value=12 Score=20.91 Aligned_cols=25 Identities=28% Similarity=0.221 Sum_probs=20.7
Q ss_pred cCCCccCCHHHHHHHHHhCCCeeeE
Q 043665 93 FLNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 93 ~~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
..+|.+.|.+..+++++.+|-.+..
T Consensus 11 ~~~g~~~t~~~I~~il~aaGveve~ 35 (58)
T 3a1y_A 11 HSVGKEINEENLKAVLQAAGVEPEE 35 (58)
T ss_dssp HHTTCCCCHHHHHHHHHHTTCCCCH
T ss_pred HhCCCCCCHHHHHHHHHHcCCCccH
Confidence 3567899999999999999976544
No 271
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=45.76 E-value=20 Score=24.69 Aligned_cols=30 Identities=13% Similarity=0.224 Sum_probs=22.8
Q ss_pred CCC-ccCCHHHHHHHHHhCCCeeeEEEecCC
Q 043665 94 LNG-KEGSVYDWKKLFLAAGFSHYKITPNLG 123 (132)
Q Consensus 94 ~~g-~~rt~~e~~~ll~~aGf~~~~~~~~~~ 123 (132)
.|| ..-.-+|++++|+++||+.++..-..|
T Consensus 16 VGG~nkv~MadLr~~l~~lGf~~V~TyI~SG 46 (183)
T 2hiy_A 16 VGGKNKVVMAELRQELTNLGLEKVESYINSG 46 (183)
T ss_dssp CC-CCCCCHHHHHHHHHHHTCEEEEEETTTT
T ss_pred cCCCCcccHHHHHHHHHHcCCccceEEEecC
Confidence 455 356789999999999999988764433
No 272
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=40.88 E-value=16 Score=22.85 Aligned_cols=31 Identities=13% Similarity=0.088 Sum_probs=24.5
Q ss_pred cCCCccCCHHHHHHHHHhCCCeeeEEEecCC
Q 043665 93 FLNGKEGSVYDWKKLFLAAGFSHYKITPNLG 123 (132)
Q Consensus 93 ~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 123 (132)
..-|...+.+++.+.|.+.||+.+......|
T Consensus 17 l~~G~~i~~~~l~~~L~~~GY~r~~~v~~~G 47 (106)
T 3fpn_B 17 LRVGMEIERNALLRRLVDIQYDRNDIDFRRG 47 (106)
T ss_dssp EETTCBCCHHHHHHHHHHTTCEECTTCCCTT
T ss_pred EECCCCcCHHHHHHHHHHcCCEECCccCCcE
Confidence 3578999999999999999998766544333
No 273
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=37.72 E-value=37 Score=25.84 Aligned_cols=65 Identities=8% Similarity=-0.086 Sum_probs=43.2
Q ss_pred CCCeEEEeec-hhHHhhhcC-------CCCeEEEe--ccc-cCCC-ceEEEehhhhc-CCC-hHHHHHHHHHHhhhhCCC
Q 043665 10 PDIKCIVLIC-LLWWIIWWG-------TNNLEFFL--EFE-AIPP-ANVVLLKWILH-DWS-DEESLRYLKKKCEESIPS 75 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~-------~~ri~~~~--~~~-~~P~-~D~~ll~~vlh-~~~-de~~~~iL~~~~~~al~~ 75 (132)
+..+++.+|. |.+++.|+. .++|++.. +++ +.|. +|++++.--.. .+. +++...+.+ .+.+.|++
T Consensus 256 ~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~-~lg~~lk~ 334 (385)
T 3ldu_A 256 SKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYK-ELGYAFRK 334 (385)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHH-HHHHHHHT
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHH-HHHHHHhh
Confidence 4468999998 888988875 35799988 665 3343 99988842221 122 345566777 77776665
No 274
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=36.29 E-value=1.1e+02 Score=22.34 Aligned_cols=70 Identities=10% Similarity=-0.192 Sum_probs=43.5
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCCCCe-EEEe-ccc-cCCCceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGTNNL-EFFL-EFE-AIPPANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri-~~~~-~~~-~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
+..+.++....+++++|. +..++.+.+.+-+ .... .-+ -...+|+++++ .+......+++ .+...++++.
T Consensus 49 A~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVila-----vp~~~~~~vl~-~l~~~l~~~~ 122 (314)
T 3ggo_A 49 AKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-----SPVRTFREIAK-KLSYILSEDA 122 (314)
T ss_dssp HHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEEC-----SCGGGHHHHHH-HHHHHSCTTC
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEe-----CCHHHHHHHHH-HHhhccCCCc
Confidence 344555444348899998 5566665553332 2222 323 35569999985 34455677888 8888888876
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=35.97 E-value=42 Score=25.86 Aligned_cols=68 Identities=9% Similarity=-0.113 Sum_probs=45.8
Q ss_pred HHHHHHCCC-CeEEEeec-hhHHhhhcC-------CCC-eEEEe--c---cc-cCC-CceEEEehhhhcCCChHHHHHHH
Q 043665 3 RAIATAFPD-IKCIVLIC-LLWWIIWWG-------TNN-LEFFL--E---FE-AIP-PANVVLLKWILHDWSDEESLRYL 65 (132)
Q Consensus 3 ~~l~~~~P~-l~~~v~Dl-p~v~~~a~~-------~~r-i~~~~--~---~~-~~P-~~D~~ll~~vlh~~~de~~~~iL 65 (132)
..++++.++ -+++.+|. |..++.+++ .++ ++++. . .. ..+ .+|+|++-- ... ...++
T Consensus 68 l~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP--~g~----~~~~l 141 (392)
T 3axs_A 68 IRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP--FGT----PVPFI 141 (392)
T ss_dssp HHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC--SSC----CHHHH
T ss_pred HHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC--CcC----HHHHH
Confidence 445666565 46899998 778887765 345 88886 3 33 334 499999843 111 13578
Q ss_pred HHHhhhhCCCCC
Q 043665 66 KKKCEESIPSND 77 (132)
Q Consensus 66 ~~~~~~al~~~g 77 (132)
. .+.+.|++||
T Consensus 142 ~-~a~~~Lk~gG 152 (392)
T 3axs_A 142 E-SVALSMKRGG 152 (392)
T ss_dssp H-HHHHHEEEEE
T ss_pred H-HHHHHhCCCC
Confidence 8 8888899988
No 276
>3i31_A Heat resistant RNA dependent ATPase; RNA helicase, RNA recognition motif, ATP-binding, helicase, nucleotide-binding; 1.80A {Thermus thermophilus}
Probab=35.45 E-value=75 Score=19.27 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=24.9
Q ss_pred CCCccCCHHHHHHHHHhCCCeeeEEEecCC
Q 043665 94 LNGKEGSVYDWKKLFLAAGFSHYKITPNLG 123 (132)
Q Consensus 94 ~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 123 (132)
..|..-|..-..++|+++|+.+-+|....+
T Consensus 18 l~G~rLS~~R~VAlLk~aG~~iGkI~~~~~ 47 (88)
T 3i31_A 18 ATGPRLSLPRLVALLKGQGLEVGKVAEAEG 47 (88)
T ss_dssp EECTTCCHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EecccccHHHHHHHHHHcccccccEEeccc
Confidence 367888999999999999998888875543
No 277
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=35.03 E-value=17 Score=20.35 Aligned_cols=21 Identities=33% Similarity=0.392 Sum_probs=16.9
Q ss_pred CCHHHHHHHHHhCCCeeeEEE
Q 043665 99 GSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 99 rt~~e~~~ll~~aGf~~~~~~ 119 (132)
--..+|+.+|.++|.+..++.
T Consensus 33 g~pp~W~~ll~~sGIt~~e~k 53 (59)
T 1cee_B 33 NLDPDLRSLFSRAGISEAQLT 53 (59)
T ss_dssp SCCHHHHHHHTTTTSCSSCCC
T ss_pred CCCHHHHHHHHHcCCCHHHHh
Confidence 347899999999998866553
No 278
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=34.48 E-value=16 Score=21.33 Aligned_cols=27 Identities=26% Similarity=0.294 Sum_probs=21.4
Q ss_pred hhcCCCc-cCCHHHHHHHHHhCCCeeeE
Q 043665 91 ATFLNGK-EGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 91 ~~~~~g~-~rt~~e~~~ll~~aGf~~~~ 117 (132)
++..+|. +.|.+..+.+++.+|-.+..
T Consensus 10 ll~~~g~~~~ta~~I~~il~aaGvevd~ 37 (70)
T 2lbf_B 10 LAALGGNSSPSAKDIKKILDSVGIEADD 37 (70)
T ss_dssp HHHHHTCSSCCHHHHHHHHHTTTCCCCT
T ss_pred HHHhCCCCCCCHHHHHHHHHHcCCCccH
Confidence 3345677 89999999999999976543
No 279
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=34.27 E-value=79 Score=23.42 Aligned_cols=46 Identities=20% Similarity=0.046 Sum_probs=32.2
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC--CCCeEEEe-cccc-------C--CCceEEEe
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG--TNNLEFFL-EFEA-------I--PPANVVLL 49 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~~ri~~~~-~~~~-------~--P~~D~~ll 49 (132)
+..|+++ +.+.+.+|. |..++.+++ .+|++++. -|.. . .+.|.+++
T Consensus 37 S~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 37 ARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp HHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred HHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 3567776 779999998 778877654 36999998 4431 1 24788876
No 280
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=33.62 E-value=18 Score=24.74 Aligned_cols=24 Identities=17% Similarity=0.155 Sum_probs=20.3
Q ss_pred CCCccCCHHHHHHHHHhCCCeeeE
Q 043665 94 LNGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 94 ~~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
.+....|.+|+.+.|++.||.+.+
T Consensus 30 ~~~~I~tQeEL~~~L~~~Gi~vTQ 53 (170)
T 3lap_A 30 SSAQVRSQNELAALLAAEGIEVTQ 53 (170)
T ss_dssp HHSCCCSHHHHHHHHHHTTCCCCH
T ss_pred HhCCCCCHHHHHHHHHHcCCCcCc
Confidence 456778999999999999998754
No 281
>3aaf_A Werner syndrome ATP-dependent helicase; helix-turn-helix, winged-helix, protein-DNA complex, DNA-BIN helicase; HET: DNA; 1.90A {Homo sapiens} PDB: 2axl_A
Probab=32.40 E-value=1e+02 Score=19.83 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=20.0
Q ss_pred hcCC-CccCCHHHHHHHHHhC---CCeeeEE
Q 043665 92 TFLN-GKEGSVYDWKKLFLAA---GFSHYKI 118 (132)
Q Consensus 92 ~~~~-g~~rt~~e~~~ll~~a---Gf~~~~~ 118 (132)
-.+| |+..+..+|++++++. ||=....
T Consensus 57 ~tfGigk~~s~~~w~~lirqLi~~G~L~~~~ 87 (134)
T 3aaf_A 57 SLFGTGKDQTESWWKAFSRQLITEGFLVEVS 87 (134)
T ss_dssp TTTTTTTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCceeec
Confidence 3344 8999999999998876 7654443
No 282
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=32.11 E-value=1.2e+02 Score=21.94 Aligned_cols=62 Identities=13% Similarity=0.032 Sum_probs=43.4
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcC---CCCeEEEe--ccc-cCC---CceEEEehhhhcCCChHHHHHHHH
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWG---TNNLEFFL--EFE-AIP---PANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~---~~ri~~~~--~~~-~~P---~~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
+..|+++. .+++.+|+ |..++.+++ .++++++. +++ +++ .+| .+++|.-++.+..-..++|.
T Consensus 61 t~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~-~iv~NlPy~iss~il~~ll~ 132 (271)
T 3fut_A 61 TRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGS-LLVANLPYHIATPLVTRLLK 132 (271)
T ss_dssp HHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTE-EEEEEECSSCCHHHHHHHHH
T ss_pred HHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCcc-EEEecCcccccHHHHHHHhc
Confidence 34566653 57899998 677777765 46899888 655 444 345 46778888888877777775
No 283
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=31.68 E-value=74 Score=24.58 Aligned_cols=66 Identities=11% Similarity=-0.035 Sum_probs=39.4
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC------CCCeEEEe--ccccCC-CceEEEehhhhcCCChHHHHHHHHHHhhhh
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG------TNNLEFFL--EFEAIP-PANVVLLKWILHDWSDEESLRYLKKKCEES 72 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~------~~ri~~~~--~~~~~P-~~D~~ll~~vlh~~~de~~~~iL~~~~~~a 72 (132)
..+++. ..+++.+|. |..++.|+. .+ ++|+. .++..+ .+|++++.---.... + .+++ .++ .
T Consensus 306 l~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g~~-~---~~~~-~l~-~ 376 (425)
T 2jjq_A 306 IYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAGLH-P---RLVK-RLN-R 376 (425)
T ss_dssp HHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTCSC-H---HHHH-HHH-H
T ss_pred HHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccchH-H---HHHH-HHH-h
Confidence 345544 458999998 778887765 23 78887 555444 599999832211111 1 2444 443 3
Q ss_pred CCCCC
Q 043665 73 IPSND 77 (132)
Q Consensus 73 l~~~g 77 (132)
++|+|
T Consensus 377 l~p~g 381 (425)
T 2jjq_A 377 EKPGV 381 (425)
T ss_dssp HCCSE
T ss_pred cCCCc
Confidence 77876
No 284
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=31.29 E-value=71 Score=17.73 Aligned_cols=20 Identities=20% Similarity=0.198 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHhCCCeeeEE
Q 043665 99 GSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 99 rt~~e~~~ll~~aGf~~~~~ 118 (132)
.+.++-+++|+++||+...+
T Consensus 16 ~~~~~A~~~L~~~Gl~~~~~ 35 (71)
T 3ouv_A 16 QTVDVAQKNMNVYGFTKFSQ 35 (71)
T ss_dssp CBHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHCCCeEEEE
Confidence 56889999999999987544
No 285
>4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=30.91 E-value=37 Score=18.02 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=15.5
Q ss_pred CCCeEEEe----ccc----cCCCceEEEeh
Q 043665 29 TNNLEFFL----EFE----AIPPANVVLLK 50 (132)
Q Consensus 29 ~~ri~~~~----~~~----~~P~~D~~ll~ 50 (132)
..||+++- .++ ++|.||.|+|.
T Consensus 10 PsrVQLvRAst~sLEv~W~~vptA~~YiLQ 39 (45)
T 4go6_A 10 PARVQLVRANTNSLEVSWGAVATADSYLLQ 39 (45)
T ss_dssp CEEEEEEEECSSCEEEEEECCTTCSEEEEE
T ss_pred cceEEEEEeccceEEEEcCCCcchheeEEE
Confidence 45777775 333 67789999984
No 286
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=30.07 E-value=14 Score=21.30 Aligned_cols=18 Identities=28% Similarity=0.265 Sum_probs=14.5
Q ss_pred CHHHHHHHHHhCCCeeeE
Q 043665 100 SVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 100 t~~e~~~ll~~aGf~~~~ 117 (132)
-++||+.+|+.+|.+..+
T Consensus 23 lp~eW~~ll~~sGIs~~~ 40 (65)
T 2lnh_A 23 LDPELKNLFDMCGISEAQ 40 (65)
T ss_dssp CCTTHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHcCCCHHH
Confidence 357999999999987543
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=30.02 E-value=59 Score=27.51 Aligned_cols=66 Identities=6% Similarity=-0.096 Sum_probs=45.3
Q ss_pred CCeEEEeechh-HHhhhcC------CCCeEEEe--ccc-cC------CC-ceEEEehhhhcCCChHHHHHHHHHHhhhhC
Q 043665 11 DIKCIVLICLL-WWIIWWG------TNNLEFFL--EFE-AI------PP-ANVVLLKWILHDWSDEESLRYLKKKCEESI 73 (132)
Q Consensus 11 ~l~~~v~Dlp~-v~~~a~~------~~ri~~~~--~~~-~~------P~-~D~~ll~~vlh~~~de~~~~iL~~~~~~al 73 (132)
..+++.+|-.. .+...+. .++|+++. +.+ .+ |+ +|+++--+.=.....|-..+.|. .+.+-|
T Consensus 446 ~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld-~v~r~L 524 (745)
T 3ua3_A 446 KVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLD-GVTGFL 524 (745)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHH-TTGGGS
T ss_pred ccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHH-HHHHhC
Confidence 34788888733 3322221 68999998 655 44 54 99988766643335566778899 888999
Q ss_pred CCCC
Q 043665 74 PSND 77 (132)
Q Consensus 74 ~~~g 77 (132)
+|||
T Consensus 525 kp~G 528 (745)
T 3ua3_A 525 KPTT 528 (745)
T ss_dssp CTTC
T ss_pred CCCc
Confidence 9999
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=29.56 E-value=63 Score=23.67 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=30.5
Q ss_pred CCeEEEe--cccc---CC--CceEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC
Q 043665 30 NNLEFFL--EFEA---IP--PANVVLLKWILHDWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 30 ~ri~~~~--~~~~---~P--~~D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g 77 (132)
++|+++. +.+. .+ .+|++++-- |+ -+.....|. .+...|+|||
T Consensus 189 ~~I~li~Gda~etL~~~~~~~~d~vfIDa---D~-y~~~~~~Le-~~~p~L~pGG 238 (282)
T 2wk1_A 189 EQVRFLPGWFKDTLPTAPIDTLAVLRMDG---DL-YESTWDTLT-NLYPKVSVGG 238 (282)
T ss_dssp TTEEEEESCHHHHSTTCCCCCEEEEEECC---CS-HHHHHHHHH-HHGGGEEEEE
T ss_pred CceEEEEeCHHHHHhhCCCCCEEEEEEcC---Cc-cccHHHHHH-HHHhhcCCCE
Confidence 8999998 4443 33 388888843 22 134678899 9999999998
No 289
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=27.94 E-value=86 Score=23.44 Aligned_cols=29 Identities=17% Similarity=-0.042 Sum_probs=20.4
Q ss_pred HHHHHHHHhCCCeeeEEEecCCcceEEEE
Q 043665 102 YDWKKLFLAAGFSHYKITPNLGLWSLIEA 130 (132)
Q Consensus 102 ~e~~~ll~~aGf~~~~~~~~~~~~~~ie~ 130 (132)
..++.-|++|||++.++...++-...+.+
T Consensus 229 g~VRR~L~~aGF~V~k~~G~g~KReml~A 257 (308)
T 3vyw_A 229 LSVRKSLLTLGFKVGSSREIGRKRKGTVA 257 (308)
T ss_dssp HHHHHHHHHTTCEEEEEECC---CEEEEE
T ss_pred HHHHHHHHHCCCEEEecCCCCCCCceeEE
Confidence 57788999999999998776665544444
No 290
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=26.62 E-value=1.2e+02 Score=21.43 Aligned_cols=63 Identities=8% Similarity=-0.097 Sum_probs=41.3
Q ss_pred HHHHHHCCCCeEEEeec-hhHHhhhcC--CCCeEEEe--ccc-cCCC--ceEEEehhhhcCCChHHHHHHHH
Q 043665 3 RAIATAFPDIKCIVLIC-LLWWIIWWG--TNNLEFFL--EFE-AIPP--ANVVLLKWILHDWSDEESLRYLK 66 (132)
Q Consensus 3 ~~l~~~~P~l~~~v~Dl-p~v~~~a~~--~~ri~~~~--~~~-~~P~--~D~~ll~~vlh~~~de~~~~iL~ 66 (132)
..++++ +..+++.+|+ +..++.+++ .++++++. +.+ +++. .+..++.|.-++.+..-..++|+
T Consensus 47 ~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i~~~il~~ll~ 117 (249)
T 3ftd_A 47 KVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGNLPYNVASLIIENTVY 117 (249)
T ss_dssp HHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEECCTTTHHHHHHHHHH
T ss_pred HHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEEEEECchhccHHHHHHHHh
Confidence 344443 5678999998 677777765 45788887 554 4442 15577777777776665555555
No 291
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=26.55 E-value=64 Score=17.86 Aligned_cols=31 Identities=13% Similarity=-0.153 Sum_probs=22.6
Q ss_pred HHHCCCCeEEEeechhH-HhhhcCCCCeEEEe
Q 043665 6 ATAFPDIKCIVLICLLW-WIIWWGTNNLEFFL 36 (132)
Q Consensus 6 ~~~~P~l~~~v~Dlp~v-~~~a~~~~ri~~~~ 36 (132)
...||.++++...+|.. ++.....+.|.+++
T Consensus 26 ~~~~~~I~a~~~~lp~~~~~~L~~~p~V~yVE 57 (65)
T 2z30_B 26 VYQFKLIPAVVVDVPANAVGKLKKMPGVEKVE 57 (65)
T ss_dssp EEECSSSSEEEEEECGGGHHHHHTSTTEEEEE
T ss_pred EEEecCCcEEEEEeCHHHHHHHhcCCCceEEe
Confidence 35689999999999875 44444566777776
No 292
>3izc_v 60S acidic ribosomal protein (P2); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_v
Probab=25.77 E-value=11 Score=23.94 Aligned_cols=29 Identities=10% Similarity=0.066 Sum_probs=22.9
Q ss_pred hhhcCCCccCCHHHHHHHHHhCCCeeeEE
Q 043665 90 MATFLNGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 90 m~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
+++..+|.+.|.+.+..+++.+|-.+...
T Consensus 8 LL~~~gG~e~tad~I~~ilkAaGveVe~~ 36 (106)
T 3izc_v 8 LLLNAAGNTPDATKIKAILESVGIEIEDE 36 (106)
T ss_dssp HHHHHHTCCCTTTTHHHHHHHHTCCCCHH
T ss_pred HHHHhcCCCCCHHHHHHHHHHcCCCcCHH
Confidence 44556788899999999999999776543
No 293
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=25.71 E-value=99 Score=24.20 Aligned_cols=75 Identities=16% Similarity=0.057 Sum_probs=44.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCC------------------CCeEEEe-ccccCCCceEEEeh--hhhc-----
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGT------------------NNLEFFL-EFEAIPPANVVLLK--WILH----- 54 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~------------------~ri~~~~-~~~~~P~~D~~ll~--~vlh----- 54 (132)
+..|+++.++.+++++|. +..++...+. .++++.. ..+.+..+|+++++ .-.+
T Consensus 25 A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~ 104 (481)
T 2o3j_A 25 CAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTKMYGRG 104 (481)
T ss_dssp HHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSEEEECCCCCBCCSSTT
T ss_pred HHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCEEEEecCCcccccccc
Confidence 566777777889999997 6666655431 1333333 22223458888886 2222
Q ss_pred ---CCChHHHHHHHHHHhhhhCCCCC
Q 043665 55 ---DWSDEESLRYLKKKCEESIPSND 77 (132)
Q Consensus 55 ---~~~de~~~~iL~~~~~~al~~~g 77 (132)
..+-......++ .+.+.++++.
T Consensus 105 ~~~~~dl~~v~~~~~-~i~~~l~~g~ 129 (481)
T 2o3j_A 105 KGMAPDLKYVESVSR-TIAQYAGGPK 129 (481)
T ss_dssp TTTSBCCHHHHHHHH-HHHHHCCSCE
T ss_pred ccCCCcHHHHHHHHH-HHHHhCCCCC
Confidence 122234566677 7777787764
No 294
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=25.44 E-value=18 Score=28.07 Aligned_cols=67 Identities=10% Similarity=-0.017 Sum_probs=43.4
Q ss_pred CCCeEEEeec-hhHHhhhcC------CC--CeEEEe--ccc-cCC-CceEEEehhhhcCC-ChH--------------HH
Q 043665 10 PDIKCIVLIC-LLWWIIWWG------TN--NLEFFL--EFE-AIP-PANVVLLKWILHDW-SDE--------------ES 61 (132)
Q Consensus 10 P~l~~~v~Dl-p~v~~~a~~------~~--ri~~~~--~~~-~~P-~~D~~ll~~vlh~~-~de--------------~~ 61 (132)
+..++..+|+ |.+++.|+. .+ ++++.. .+. +.. .+|+++..--.+.. ..+ .-
T Consensus 207 ~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~ 286 (445)
T 2okc_A 207 RDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQ 286 (445)
T ss_dssp HHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHH
T ss_pred cCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchH
Confidence 4578999998 777777764 11 566665 554 333 59999886444331 111 12
Q ss_pred HHHHHHHhhhhCCCCC
Q 043665 62 LRYLKKKCEESIPSND 77 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g 77 (132)
...++ ++.+.|+|||
T Consensus 287 ~~fl~-~~~~~Lk~gG 301 (445)
T 2okc_A 287 LNFLQ-HMMLMLKTGG 301 (445)
T ss_dssp HHHHH-HHHHHEEEEE
T ss_pred HHHHH-HHHHHhccCC
Confidence 47788 8999999986
No 295
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=24.73 E-value=1.8e+02 Score=20.38 Aligned_cols=70 Identities=14% Similarity=0.014 Sum_probs=40.6
Q ss_pred HHHHHHHCCCCeEEEeec-hhHHhhhcCCCCe-EEEe-ccccCCCceEEEehhhhcCCChHHHHHHHHHHhhhh-CCCCC
Q 043665 2 ARAIATAFPDIKCIVLIC-LLWWIIWWGTNNL-EFFL-EFEAIPPANVVLLKWILHDWSDEESLRYLKKKCEES-IPSND 77 (132)
Q Consensus 2 ~~~l~~~~P~l~~~v~Dl-p~v~~~a~~~~ri-~~~~-~~~~~P~~D~~ll~~vlh~~~de~~~~iL~~~~~~a-l~~~g 77 (132)
+..|.+..++.++++.|. +..++.+.+.+.+ .... .-+.+..+|++++. .+......+++ .+... ++++.
T Consensus 22 a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVila-----vp~~~~~~v~~-~l~~~~l~~~~ 95 (290)
T 3b1f_A 22 ALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILA-----VPIKKTIDFIK-ILADLDLKEDV 95 (290)
T ss_dssp HHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEEC-----SCHHHHHHHHH-HHHTSCCCTTC
T ss_pred HHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEc-----CCHHHHHHHHH-HHHhcCCCCCC
Confidence 345666655678999997 5555554432221 2222 22223458988884 34555567777 77776 77664
No 296
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=24.59 E-value=28 Score=24.10 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=15.3
Q ss_pred CCccCCHHHHHHHHHhCCCee
Q 043665 95 NGKEGSVYDWKKLFLAAGFSH 115 (132)
Q Consensus 95 ~g~~rt~~e~~~ll~~aGf~~ 115 (132)
+-...|.+|+.+.|++.||.+
T Consensus 44 ~~~I~TQeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 44 EERFGSQGEIVEALKQEGFEN 64 (180)
T ss_dssp HTCCCSHHHHHHHHHHTTCTT
T ss_pred hCCcCCHHHHHHHHHHCCCcc
Confidence 344577788888888888876
No 297
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=24.41 E-value=61 Score=18.90 Aligned_cols=18 Identities=11% Similarity=0.132 Sum_probs=15.9
Q ss_pred CCHHHHHHHHHhCCCeee
Q 043665 99 GSVYDWKKLFLAAGFSHY 116 (132)
Q Consensus 99 rt~~e~~~ll~~aGf~~~ 116 (132)
...+++.+-|+++||.+.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 568899999999999885
No 298
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=24.29 E-value=1.1e+02 Score=18.92 Aligned_cols=29 Identities=17% Similarity=0.371 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCeeeEEEecCC---cceEEEE
Q 043665 102 YDWKKLFLAAGFSHYKITPNLG---LWSLIEA 130 (132)
Q Consensus 102 ~e~~~ll~~aGf~~~~~~~~~~---~~~~ie~ 130 (132)
.|+.+.|+++|....+|.-.+. ...++|+
T Consensus 27 PEv~~~L~~aGi~~ysIfl~~~~~~LF~~~E~ 58 (104)
T 1x8d_A 27 PELEAVLKSHGAHNYAIYLDKARNLLFAMVEI 58 (104)
T ss_dssp HHHHHHHHHTTEEEEEEEEETTTTEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEEECCCCeEEEEEEE
Confidence 5888999999999999987753 4677775
No 299
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=24.08 E-value=27 Score=20.23 Aligned_cols=24 Identities=17% Similarity=0.047 Sum_probs=20.0
Q ss_pred CCccCCHHHHHHHHHhCCCeeeEE
Q 043665 95 NGKEGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 95 ~g~~rt~~e~~~ll~~aGf~~~~~ 118 (132)
.|...|.+..+++++.+|-.+...
T Consensus 19 ~g~~~ta~~I~~il~AaGveve~~ 42 (69)
T 2lbf_A 19 DEVTVTEDKINALIKAAGVNVEPF 42 (69)
T ss_dssp HTCCCCHHHHHHHHHHHTCCCCTH
T ss_pred CCCCCCHHHHHHHHHHcCCCccHH
Confidence 368999999999999999766543
No 300
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=24.00 E-value=41 Score=20.00 Aligned_cols=21 Identities=14% Similarity=0.398 Sum_probs=16.5
Q ss_pred cCCHHHHHHHHHhCCCeeeEE
Q 043665 98 EGSVYDWKKLFLAAGFSHYKI 118 (132)
Q Consensus 98 ~rt~~e~~~ll~~aGf~~~~~ 118 (132)
.--..||+.+|..+|.+..++
T Consensus 28 ~GlP~eW~~ll~~sGIs~~e~ 48 (80)
T 1f3m_A 28 TGMPEQWARLLQTSNITKSEQ 48 (80)
T ss_dssp ESCCHHHHHHHHTSCCCHHHH
T ss_pred CCCCHHHHHHHHHcCCCHHHH
Confidence 445789999999999875443
No 301
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=23.16 E-value=38 Score=22.52 Aligned_cols=23 Identities=13% Similarity=0.124 Sum_probs=16.8
Q ss_pred CCccCCHHHHHHHHHhCCCeeeE
Q 043665 95 NGKEGSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 95 ~g~~rt~~e~~~ll~~aGf~~~~ 117 (132)
.....|.+|+.+.|++.||.+.+
T Consensus 16 ~~~~~tq~eL~~~L~~~G~~Vtq 38 (149)
T 1b4a_A 16 SNDIETQDELVDRLREAGFNVTQ 38 (149)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCH
T ss_pred HCCCccHHHHHHHHHHcCCCcCH
Confidence 34557888888888888887543
No 302
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=22.66 E-value=45 Score=21.01 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=15.2
Q ss_pred CCHHHHHHHHHhCCCeeeE
Q 043665 99 GSVYDWKKLFLAAGFSHYK 117 (132)
Q Consensus 99 rt~~e~~~ll~~aGf~~~~ 117 (132)
--..+|+.+|+.+|.+...
T Consensus 21 glppeWk~LL~~aGITe~e 39 (107)
T 1ej5_A 21 NLDPDLRSLFSRAGISEAQ 39 (107)
T ss_dssp TCCHHHHHHHHHTTCCHHH
T ss_pred CCCHHHHHHHHHcCCCHHH
Confidence 3468999999999987543
No 303
>2xc7_A Phosphorylated adapter RNA export protein; RNA binding protein, protein-RNA complex, nuclear export; NMR {Homo sapiens}
Probab=21.47 E-value=16 Score=23.12 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=41.7
Q ss_pred eEEEehhhhcCCChHHHHHHHHHHhhhhCCCCC----CCCcchhhhhhhhhhcCCCccCCHHHHHHHHHh
Q 043665 45 NVVLLKWILHDWSDEESLRYLKKKCEESIPSND----EGRKTQLCFDLLMATFLNGKEGSVYDWKKLFLA 110 (132)
Q Consensus 45 D~~ll~~vlh~~~de~~~~iL~~~~~~al~~~g----~~~~~~~~~dl~m~~~~~g~~rt~~e~~~ll~~ 110 (132)
+.+++.++++-..-+.|..+|+ ...+.-..|| +++...+.-.++....-+-..-+.+++..++..
T Consensus 23 k~~li~rvV~~lG~~~~~~ll~-eT~~IE~~GG~~~~dG~RrRTpGGVF~~LlK~~~~I~~e~~k~If~~ 91 (104)
T 2xc7_A 23 KKDLIARVVRIIGNKKAIELLM-ETAEVEQNGGLFIMNGSRRRTPGGVFLNLLKNTPSISEEQIKDIFYI 91 (104)
T ss_dssp THHHHHHHHHHHCHHHHHHHHH-HHHHHHHHTCCCCSSSSSCCCHHHHHHHHHHHCSSCCHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCEEccCCCcCCCCchhHHHHHhccccCCHHHHHHHHHH
Confidence 4567889999999999999999 8888777777 232222222222221111234678888888764
No 304
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=21.39 E-value=96 Score=16.49 Aligned_cols=22 Identities=14% Similarity=-0.008 Sum_probs=17.7
Q ss_pred cCCHHHHHHHHHhCCCeeeEEE
Q 043665 98 EGSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 98 ~rt~~e~~~ll~~aGf~~~~~~ 119 (132)
.-+.+++.+.++++||...-+.
T Consensus 45 ~~~~~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 45 EHSMDTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp SSCHHHHHHHHHTTCSCEEEEE
T ss_pred cCCHHHHHHHHHHcCCceEecC
Confidence 3578999999999999876443
No 305
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=21.30 E-value=50 Score=21.75 Aligned_cols=16 Identities=13% Similarity=0.250 Sum_probs=14.4
Q ss_pred HHHHHHHhhhhCCCCCC
Q 043665 62 LRYLKKKCEESIPSNDE 78 (132)
Q Consensus 62 ~~iL~~~~~~al~~~g~ 78 (132)
+.++. .++++|+|||.
T Consensus 78 r~li~-~l~~aLkpgG~ 93 (136)
T 2km1_A 78 KKLIS-VLADSLKPNGS 93 (136)
T ss_dssp HHHHH-HHHTTCCTTCC
T ss_pred HHHHH-HHHHHhCCCCE
Confidence 78899 99999999983
No 306
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=21.19 E-value=52 Score=23.88 Aligned_cols=38 Identities=5% Similarity=-0.159 Sum_probs=27.2
Q ss_pred HHHHHHHCCC--CeEEEeec-hhHHhhhcC--CCCeEEEe--ccc
Q 043665 2 ARAIATAFPD--IKCIVLIC-LLWWIIWWG--TNNLEFFL--EFE 39 (132)
Q Consensus 2 ~~~l~~~~P~--l~~~v~Dl-p~v~~~a~~--~~ri~~~~--~~~ 39 (132)
+..|+++.+. .+++.+|+ |..++.+++ .++++++. +++
T Consensus 57 t~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 57 TGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGG
T ss_pred HHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhc
Confidence 4566666554 56899998 778887765 47899887 554
No 307
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=21.12 E-value=1.1e+02 Score=16.37 Aligned_cols=21 Identities=5% Similarity=-0.357 Sum_probs=16.9
Q ss_pred CCHHHHHHHHHhCCCeeeEEE
Q 043665 99 GSVYDWKKLFLAAGFSHYKIT 119 (132)
Q Consensus 99 rt~~e~~~ll~~aGf~~~~~~ 119 (132)
.+.+++.+.++++||+...+.
T Consensus 51 ~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 51 LPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp SCHHHHHHHHHTTSSCEEEEE
T ss_pred CCHHHHHHHHHHhCCCceeee
Confidence 568899999999999865443
Done!