BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043672
(260 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9AXA6|ABIL1_ORYSJ Probable protein ABIL1 OS=Oryza sativa subsp. japonica
GN=Os01g0622700 PE=2 SV=1
Length = 306
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 74 IKKQQITTKKQTHHPHHQPEPCTEKKRLK---ELLSMSDLDDEVLAKPSSKS-FWQFKRS 129
I++QQ+T HH H+ P KR++ E+ + +D+D PS+K+ FW
Sbjct: 141 IRQQQMTGTATRHHKHY-IVPTLANKRMQAFSEMQTDADIDSRPRPYPSAKTLFWHLASE 199
Query: 130 SSLNCESTRSKSLI----RSLQFLSRSNSTGSAPNPKPTTSTVISKESQKQN--LKRQPS 183
+ R + ++ + SR ++P PK + + S + N +K QP
Sbjct: 200 KNSKTNGARQSEFVLEETKATKPASRGKEPSTSPLPKHLQTNLASSDFAMHNVGMKDQPG 259
Query: 184 VSRKSTMSSSSSYSGTYYYSSSTQKPPLK 212
V S+ SS + G QK PL+
Sbjct: 260 VRHLSSFSSFDNPRG-----RQIQKAPLR 283
>sp|P0CP66|CPK1_CRYNJ Mitogen-activated protein kinase CPK1 OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CPK1 PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 37/162 (22%)
Query: 54 LQELSSADELFSNGRILPMQIKKQQITTKKQTHHPHHQPEPCTEKKRLKELLSMSDLDDE 113
QE + A +L+S G IL I + + + HH +L +L +
Sbjct: 198 FQEYTKAIDLWSVGCILAEMINGKPLFPGRDYHH------------QLSLIL-------Q 238
Query: 114 VLAKPSSKSFWQFKRSSSLNCESTRSKSLIRSLQFLSRSNSTGSAPNPKPTTSTVISKES 173
VL P+ F + S RSK +R+L+F R + + P KP ++
Sbjct: 239 VLGTPTMDDFNEIT--------SQRSKDYLRALEFTRRQDFSAICPKAKPAAVDLL---- 286
Query: 174 QKQNLKRQPSVSRKSTMSSSSSYSGTYYYSSSTQKP---PLK 212
KQ L P S++ T+ + +S Y +P PLK
Sbjct: 287 -KQTLTFSP--SKRITVEEALMHSYVEAYHDPHDEPNAEPLK 325
>sp|P0CP67|CPK1_CRYNB Mitogen-activated protein kinase CPK1 OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=CPK1 PE=3
SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 37/162 (22%)
Query: 54 LQELSSADELFSNGRILPMQIKKQQITTKKQTHHPHHQPEPCTEKKRLKELLSMSDLDDE 113
QE + A +L+S G IL I + + + HH +L +L +
Sbjct: 198 FQEYTKAIDLWSVGCILAEMINGKPLFPGRDYHH------------QLSLIL-------Q 238
Query: 114 VLAKPSSKSFWQFKRSSSLNCESTRSKSLIRSLQFLSRSNSTGSAPNPKPTTSTVISKES 173
VL P+ F + S RSK +R+L+F R + + P KP ++
Sbjct: 239 VLGTPTMDDFNEIT--------SQRSKDYLRALEFTRRQDFSAICPKAKPAAVDLL---- 286
Query: 174 QKQNLKRQPSVSRKSTMSSSSSYSGTYYYSSSTQKP---PLK 212
KQ L P S++ T+ + +S Y +P PLK
Sbjct: 287 -KQTLTFSP--SKRITVEEALMHSYVEAYHDPHDEPNAEPLK 325
>sp|Q11194|YX23_CAEEL Uncharacterized protein C04E7.3 OS=Caenorhabditis elegans
GN=C04E7.3 PE=4 SV=1
Length = 518
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 99 KRLKELLSMSDLDDEVLAKPSSKSFWQFKRSSSLNCEST 137
K+LKEL DD ++A+PS+K WQ K S E T
Sbjct: 243 KQLKELTKERRRDDALVAEPSAKKKWQQKEVESKKNEGT 281
>sp|Q4IB89|ATM_GIBZE Serine/threonine-protein kinase TEL1 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TEL1 PE=3
SV=1
Length = 2813
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 90 HQPEPCTEKKRLKELLSMSDLDDEVLAKPSSKSFWQFKRSSSLNCESTRSKS-LIRSLQF 148
H +KRL L S+++LDD + SS+ +L E +++S +RS +
Sbjct: 1944 HSLNATALRKRLGALASLTELDDVLGVSDSSEM--------NLLIEKFKNRSGWMRSGLY 1995
Query: 149 LSRSNSTGSAPNPKPTTSTVISK-ESQKQNLKRQPSVSRKSTMSSSSSYSGTYYYSSSTQ 207
S G + + TT +++S+ E+ + N+K + +R+ + S + S Y Y +TQ
Sbjct: 1996 ----ESVGQILSCRSTTMSMVSQQETLRTNIKLSAATARQMEVESMITASQIYRYHQATQ 2051
Query: 208 K 208
+
Sbjct: 2052 E 2052
>sp|A2ST15|PRIS_METLZ Probable DNA primase small subunit OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=priA PE=3 SV=1
Length = 380
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 96 TEKKRLKELLSMSDLDDEVLAKPSSKSFWQFKRSSSLNCESTRSKSL-----IRSLQFLS 150
E++ L +S + L + + PS KS W+ + +LN E R L + L LS
Sbjct: 168 AERRELVNYVSGTGLSFDSMMAPSQKSGWKLRYHDALNDELARIAGLPCEDALSYLSGLS 227
Query: 151 RSNSTGSAPNPKPTTSTVISKESQKQNLKRQPSVSRKSTMSSSSSYSGTYYYSSSTQKPP 210
+ T +A K + T +S + L V + + +G ++ +P
Sbjct: 228 GISETFAAGFLKNISQTQNLLKSNPEKLLANKVVRAIANAENEPFQAGILSRAAQADEPV 287
Query: 211 -------LKKCGSYNGHNGVRISPV 228
++ GS +G +G+R+ P+
Sbjct: 288 TTDVKRLIRHPGSLHGGSGMRVVPI 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.125 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,409,427
Number of Sequences: 539616
Number of extensions: 3536028
Number of successful extensions: 14488
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 187
Number of HSP's that attempted gapping in prelim test: 12897
Number of HSP's gapped (non-prelim): 1122
length of query: 260
length of database: 191,569,459
effective HSP length: 115
effective length of query: 145
effective length of database: 129,513,619
effective search space: 18779474755
effective search space used: 18779474755
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)