Query 043672
Match_columns 260
No_of_seqs 102 out of 121
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 12:14:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043672.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/043672hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dpba_ c.43.1.1 (A:) Dihydrol 19.7 12 0.0009 30.6 0.4 26 215-250 167-192 (243)
2 d1b5sa_ c.43.1.1 (A:) Dihydrol 11.3 31 0.0023 27.8 0.7 26 215-250 166-191 (242)
3 d1scza_ c.43.1.1 (A:) Dihydrol 11.2 27 0.0019 28.4 0.2 26 215-250 155-180 (233)
4 d1qcza_ c.23.8.1 (A:) N5-CAIR 8.6 23 0.0017 27.9 -1.2 23 223-250 77-99 (163)
5 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 7.9 47 0.0034 25.3 0.5 12 58-69 71-82 (146)
6 d1xmpa_ c.23.8.1 (A:) N5-CAIR 6.9 25 0.0018 27.5 -1.7 21 225-250 79-99 (155)
7 d1u11a_ c.23.8.1 (A:) N5-CAIR 6.4 27 0.002 27.3 -1.7 22 224-250 79-100 (159)
8 d1f16a_ f.1.4.1 (A:) Proapopto 6.3 62 0.0045 25.4 0.5 10 59-68 95-104 (192)
9 d1l0ba2 c.15.1.3 (A:1705-1801) 5.5 1.5E+02 0.011 21.5 2.1 20 42-64 3-22 (97)
10 d1g1pa_ g.3.6.1 (A:) Conotoxin 5.0 1.2E+02 0.0086 17.8 1.0 14 134-150 3-16 (32)
No 1
>d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=19.74 E-value=12 Score=30.56 Aligned_cols=26 Identities=27% Similarity=0.543 Sum_probs=21.0
Q ss_pred CCcCCCCceEecccccCCCCccccccccccccceee
Q 043672 215 GSYNGHNGVRISPVLNIPPPFISNATVSLFGFGSLF 250 (260)
Q Consensus 215 Gsy~ggngvrvsPVLNvP~~~i~~~~~nlFGlGS~f 250 (260)
|.| |+.+..||||-|..+| .|+|.+-
T Consensus 167 G~~---G~~~~tpiInppq~aI-------lgvG~i~ 192 (243)
T d1dpba_ 167 GHI---GGTAFTPIVNAPEVAI-------LGVSKAS 192 (243)
T ss_dssp TTT---CCSCCCCCCCTTSSEE-------EEECCCE
T ss_pred CCc---cceeEEeeecccccee-------eecccce
Confidence 666 5778999999999854 7999874
No 2
>d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.34 E-value=31 Score=27.81 Aligned_cols=26 Identities=38% Similarity=0.666 Sum_probs=20.1
Q ss_pred CCcCCCCceEecccccCCCCccccccccccccceee
Q 043672 215 GSYNGHNGVRISPVLNIPPPFISNATVSLFGFGSLF 250 (260)
Q Consensus 215 Gsy~ggngvrvsPVLNvP~~~i~~~~~nlFGlGS~f 250 (260)
|.| ++..+.||||-|..+| +|+|.|.
T Consensus 166 G~~---G~~~ftpii~~pq~ai-------l~vG~i~ 191 (242)
T d1b5sa_ 166 GSA---GGQWFTPVINHPEVAI-------LGIGRIA 191 (242)
T ss_dssp TTT---CCSCCCCCCCTTCCEE-------EEECCCE
T ss_pred CCC---CccceecccccccceE-------EeccceE
Confidence 665 4566789999999854 9999874
No 3
>d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=11.25 E-value=27 Score=28.41 Aligned_cols=26 Identities=23% Similarity=0.576 Sum_probs=20.4
Q ss_pred CCcCCCCceEecccccCCCCccccccccccccceee
Q 043672 215 GSYNGHNGVRISPVLNIPPPFISNATVSLFGFGSLF 250 (260)
Q Consensus 215 Gsy~ggngvrvsPVLNvP~~~i~~~~~nlFGlGS~f 250 (260)
|.| ++....|+||-|..+| +|+|.+-
T Consensus 155 G~~---g~~~~tpii~ppq~aI-------l~vG~i~ 180 (233)
T d1scza_ 155 GVF---GSLMSTPIINPPQSAI-------LGMHAIK 180 (233)
T ss_dssp GGG---TCCCCCCCCCTTCSEE-------EEEEEEE
T ss_pred ccc---cceeeeeecCCCCceE-------Eecccce
Confidence 555 4567899999999855 8999873
No 4
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Probab=8.59 E-value=23 Score=27.94 Aligned_cols=23 Identities=35% Similarity=0.667 Sum_probs=15.4
Q ss_pred eEecccccCCCCccccccccccccceee
Q 043672 223 VRISPVLNIPPPFISNATVSLFGFGSLF 250 (260)
Q Consensus 223 vrvsPVLNvP~~~i~~~~~nlFGlGS~f 250 (260)
.=.-|||+||.. +..+-|+.+++
T Consensus 77 ~t~~PVIgVP~~-----~~~~~g~d~ll 99 (163)
T d1qcza_ 77 KTLVPVLGVPVQ-----SAALSGVDSLY 99 (163)
T ss_dssp SCSSCEEEEECC-----CTTTTTHHHHH
T ss_pred hccceeeecccc-----ccccCCcchhh
Confidence 346799999996 33566666554
No 5
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=7.89 E-value=47 Score=25.33 Aligned_cols=12 Identities=17% Similarity=0.227 Sum_probs=9.8
Q ss_pred CchhhhccCCee
Q 043672 58 SSADELFSNGRI 69 (260)
Q Consensus 58 ssADELFs~Gki 69 (260)
--|+|||.||.+
T Consensus 71 ~V~~elF~DG~~ 82 (146)
T d1k3ka_ 71 LSMLQVSGDGNM 82 (146)
T ss_dssp THHHHHCSSCSC
T ss_pred HHHHHHHcCCCC
Confidence 368999999963
No 6
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}
Probab=6.87 E-value=25 Score=27.51 Aligned_cols=21 Identities=33% Similarity=0.583 Sum_probs=12.9
Q ss_pred ecccccCCCCccccccccccccceee
Q 043672 225 ISPVLNIPPPFISNATVSLFGFGSLF 250 (260)
Q Consensus 225 vsPVLNvP~~~i~~~~~nlFGlGS~f 250 (260)
.-|||.||+. +..|-|+.+|+
T Consensus 79 ~~PVIgVP~~-----~~~~~G~d~ll 99 (155)
T d1xmpa_ 79 NLPVIGVPVQ-----SKALNGLDSLL 99 (155)
T ss_dssp CSCEEEEEEC-----CTTTTTHHHHH
T ss_pred cceEEEEEee-----cccCcCcccHH
Confidence 5688888886 22345655554
No 7
>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]}
Probab=6.42 E-value=27 Score=27.34 Aligned_cols=22 Identities=36% Similarity=0.560 Sum_probs=13.1
Q ss_pred EecccccCCCCccccccccccccceee
Q 043672 224 RISPVLNIPPPFISNATVSLFGFGSLF 250 (260)
Q Consensus 224 rvsPVLNvP~~~i~~~~~nlFGlGS~f 250 (260)
=.-|||+||+. +..+-|+.+|+
T Consensus 79 t~~PVIgvP~~-----~~~~~g~d~l~ 100 (159)
T d1u11a_ 79 TRLPVLGVPVE-----SRALKGMDSLL 100 (159)
T ss_dssp CSSCEEEEEEC-----CTTTTTHHHHH
T ss_pred cceeEEEeccc-----cccccccccHH
Confidence 34588888876 22455655543
No 8
>d1f16a_ f.1.4.1 (A:) Proapoptotic molecule Bax {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.31 E-value=62 Score=25.43 Aligned_cols=10 Identities=40% Similarity=0.830 Sum_probs=8.5
Q ss_pred chhhhccCCe
Q 043672 59 SADELFSNGR 68 (260)
Q Consensus 59 sADELFs~Gk 68 (260)
=|+|||.||.
T Consensus 95 Va~elF~dG~ 104 (192)
T d1f16a_ 95 VAADMFSDGN 104 (192)
T ss_dssp HHHHHTSSSS
T ss_pred HHHHHHhcCC
Confidence 5899999984
No 9
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=5.53 E-value=1.5e+02 Score=21.51 Aligned_cols=20 Identities=15% Similarity=0.011 Sum_probs=15.3
Q ss_pred CCceEeecCCCCCCCCCchhhhc
Q 043672 42 SDFDFCIGNNSFLQELSSADELF 64 (260)
Q Consensus 42 ~dFEF~~~~~s~~~~~ssADELF 64 (260)
.|||+|.- + ..+.++.|||=
T Consensus 3 ~~~~icc~-g--pFt~mt~d~Le 22 (97)
T d1l0ba2 3 EGLQIYCC-E--PFTNMPKDELE 22 (97)
T ss_dssp TTCEEEEC-S--CCSSSCHHHHH
T ss_pred CCceEEEE-c--cccCCCHHHHH
Confidence 38999976 4 35889999983
No 10
>d1g1pa_ g.3.6.1 (A:) Conotoxin {Conus ermineus, E VIa [TaxId: 55423]}
Probab=5.01 E-value=1.2e+02 Score=17.82 Aligned_cols=14 Identities=29% Similarity=0.468 Sum_probs=9.3
Q ss_pred ccccCCccccccccccc
Q 043672 134 CESTRSKSLIRSLQFLS 150 (260)
Q Consensus 134 cds~~~~~lc~slp~Ls 150 (260)
|-.-|| +| +||.|-
T Consensus 3 cikpyg--fc-slpilk 16 (32)
T d1g1pa_ 3 CIKPYG--FC-SLPILK 16 (32)
T ss_dssp CBCTTS--BC-CCSSSS
T ss_pred cccccc--ce-echhhc
Confidence 444565 78 888763
Done!