Your job contains 1 sequence.
>043680
MPSPTLLLPLLSSSPPSLFLFRLGQSHSEAVEAAYKVAIARCEHEKLKSADACLMEVIGE
KNPEHFFVATQDVDLRKKLQEVPGVPLIFGLRNALLLEPPSSFQRKFVKTSEEARSCMTK
SEFKKLKKSTKNILETKEIGDSSNKNEELENQKLEMQADKKTHYARKGMGVKDRPQFKRK
RAKAPNPLSCKKKKNHENPSTSSGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043680
(205 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062303 - symbol:MEE21 "AT2G34570" species:370... 376 1.1e-34 1
UNIPROTKB|Q08DU1 - symbol:UTP23 "rRNA-processing protein ... 162 6.4e-19 2
UNIPROTKB|Q9BRU9 - symbol:UTP23 "rRNA-processing protein ... 168 8.1e-19 2
MGI|MGI:1925831 - symbol:Utp23 "UTP23, small subunit (SSU... 168 1.7e-18 2
ZFIN|ZDB-GENE-050417-353 - symbol:utp23 "UTP23, small sub... 154 2.5e-16 2
CGD|CAL0001138 - symbol:orf19.3724 species:5476 "Candida ... 137 5.5e-14 2
UNIPROTKB|Q59V16 - symbol:CaO19.3724 "Putative uncharacte... 137 5.5e-14 2
SGD|S000005530 - symbol:UTP23 "Component of the small sub... 145 5.4e-10 1
POMBASE|SPCC18.12c - symbol:utp23 "rRNA processing protei... 141 1.7e-09 1
FB|FBgn0031361 - symbol:CG17652 species:7227 "Drosophila ... 84 2.5e-05 2
DICTYBASE|DDB_G0283685 - symbol:utp23 "FCF1 family protei... 108 0.00030 1
ASPGD|ASPL0000059200 - symbol:AN10052 species:162425 "Eme... 68 0.00079 3
>TAIR|locus:2062303 [details] [associations]
symbol:MEE21 "AT2G34570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] EMBL:CP002685 GO:GO:0009793
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
HOGENOM:HOG000239062 KO:K14773 UniGene:At.47485 UniGene:At.61738
EMBL:AY102549 EMBL:AY954813 IPI:IPI00538898 RefSeq:NP_181004.2
ProteinModelPortal:Q8L8C2 STRING:Q8L8C2 PRIDE:Q8L8C2
EnsemblPlants:AT2G34570.1 GeneID:818021 KEGG:ath:AT2G34570
TAIR:At2g34570 InParanoid:Q8L8C2 OMA:CEHEEAK PhylomeDB:Q8L8C2
ProtClustDB:CLSN2680029 Genevestigator:Q8L8C2 Uniprot:Q8L8C2
Length = 281
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 84/182 (46%), Positives = 107/182 (58%)
Query: 22 RLGQSHSEAVEAAYKVAIARCEHEKLKSADACLMEVIGEKNPEHFFVATQDVDLRKKLQE 81
+LG+ +E++EAA + A CEHE+ K+AD CL EVIG +N EHFF+ TQD + R+KLQ+
Sbjct: 72 KLGKDFAESLEAAQTLNTATCEHEEAKTADECLSEVIGVQNTEHFFLGTQDAEFRRKLQQ 131
Query: 82 VPGVPLIFGLRNALLLEPPSSFQRKFVKTSEEARSCMXXXXXXXXXXXXXNILETKEIGD 141
VPL+FGLRN LL++ PS FQR+ K SE R M + T +I
Sbjct: 132 ESIVPLVFGLRNILLIDQPSDFQRQSAKDSENKRLTMTDTEKKLL------VKRTAKIIA 185
Query: 142 SSXXXXXXXXXXXXMQADKKTHYARKGMGVKDRPQFKRKRAKAPNPLSCKKKKNHENPST 201
S+ M T + G+GVKDRPQFKR RAK PNPLSC KKK ENP +
Sbjct: 186 SNRKEATIANEEWGMPRVVST---KNGLGVKDRPQFKRNRAKGPNPLSCMKKKK-ENPQS 241
Query: 202 SS 203
S
Sbjct: 242 KS 243
>UNIPROTKB|Q08DU1 [details] [associations]
symbol:UTP23 "rRNA-processing protein UTP23 homolog"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] GO:GO:0005730
BRENDA:3.1.1.77 GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:BC123565 IPI:IPI00695224
RefSeq:NP_001069507.1 RefSeq:XP_001249520.1 UniGene:Bt.88040
ProteinModelPortal:Q08DU1 STRING:Q08DU1 PRIDE:Q08DU1 GeneID:534858
GeneID:781182 KEGG:bta:534858 KEGG:bta:781182 CTD:84294
HOGENOM:HOG000239062 HOVERGEN:HBG054456 InParanoid:Q08DU1 KO:K14773
OrthoDB:EOG41G35D NextBio:20876552 Uniprot:Q08DU1
Length = 248
Score = 162 (62.1 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 23 LGQSHSEAVEAAYKVAIARCEHEK-LKSADACLMEVIGEKNPEHFFVATQDVDLRKKLQE 81
LG+ A A K + C H K S CL+ ++ + NP H+F+ATQD +L K+++
Sbjct: 72 LGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFLATQDQNLSMKVKK 131
Query: 82 VPGVPLIFGLRNALLLEPPSSFQRKFVKTSEEAR 115
PG+PL+F ++N ++L+ PS FVK E +
Sbjct: 132 KPGIPLMFIIQNTIVLDKPSPKTIAFVKAVESGQ 165
Score = 79 (32.9 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 171 VKD---RPQFKRKRAKAPNPLSC--KKKKNHENPSTSSGK 205
VKD R + KRK+ PNPLSC KKKK + S++S K
Sbjct: 185 VKDPEQRRRKKRKKVSGPNPLSCLKKKKKTQDTNSSASEK 224
>UNIPROTKB|Q9BRU9 [details] [associations]
symbol:UTP23 "rRNA-processing protein UTP23 homolog"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] EMBL:CH471060
GO:GO:0005730 GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 CTD:84294 HOGENOM:HOG000239062
HOVERGEN:HBG054456 KO:K14773 EMBL:AK055279 EMBL:AK315770
EMBL:AC087350 EMBL:AP002905 EMBL:BC005955 EMBL:BC022441
IPI:IPI00031612 IPI:IPI00980310 RefSeq:NP_115710.2 UniGene:Hs.86970
ProteinModelPortal:Q9BRU9 STRING:Q9BRU9 PhosphoSite:Q9BRU9
DMDM:296452859 PRIDE:Q9BRU9 Ensembl:ENST00000309822
Ensembl:ENST00000357148 GeneID:84294 KEGG:hsa:84294 UCSC:uc003yoc.3
GeneCards:GC08P117849 HGNC:HGNC:28224 HPA:HPA044418
neXtProt:NX_Q9BRU9 PharmGKB:PA162408778 InParanoid:Q9BRU9
OMA:GLVKNPE PhylomeDB:Q9BRU9 ChiTaRS:UTP23 GenomeRNAi:84294
NextBio:73940 ArrayExpress:Q9BRU9 Bgee:Q9BRU9 CleanEx:HS_UTP23
Genevestigator:Q9BRU9 Uniprot:Q9BRU9
Length = 249
Score = 168 (64.2 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 37/94 (39%), Positives = 54/94 (57%)
Query: 23 LGQSHSEAVEAAYKVAIARCEHEK-LKSADACLMEVIGEKNPEHFFVATQDVDLRKKLQE 81
LG+ A A K + C H K S CL+ ++ E NP H+FVATQD +L K+++
Sbjct: 72 LGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVATQDQNLSVKVKK 131
Query: 82 VPGVPLIFGLRNALLLEPPSSFQRKFVKTSEEAR 115
PGVPL+F ++N ++L+ PS FVK E +
Sbjct: 132 KPGVPLMFIIQNTMVLDKPSPKTIAFVKAVESGQ 165
Score = 72 (30.4 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 178 KRKRAKAPNPLSCKKKKNHENPSTSS 203
KRK+ PNPLSC KKK + P T S
Sbjct: 195 KRKKISGPNPLSCLKKKK-KAPDTQS 219
>MGI|MGI:1925831 [details] [associations]
symbol:Utp23 "UTP23, small subunit (SSU) processome
component, homolog (yeast)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=IEA] MGI:MGI:1925831 GO:GO:0005730
GO:GO:0006364 eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 CTD:84294 HOVERGEN:HBG054456 KO:K14773 OMA:GLVKNPE
EMBL:AK021306 EMBL:AK042518 EMBL:AK134445 EMBL:BC046791
EMBL:BC056961 IPI:IPI00459626 RefSeq:NP_084408.1 UniGene:Mm.176347
ProteinModelPortal:Q9CX11 STRING:Q9CX11 PhosphoSite:Q9CX11
PaxDb:Q9CX11 PRIDE:Q9CX11 Ensembl:ENSMUST00000137116 GeneID:78581
KEGG:mmu:78581 UCSC:uc007vrc.2 GeneTree:ENSGT00550000074848
HOGENOM:HOG000185771 InParanoid:Q9CX11 NextBio:349135 Bgee:Q9CX11
Genevestigator:Q9CX11 Uniprot:Q9CX11
Length = 249
Score = 168 (64.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 36/91 (39%), Positives = 52/91 (57%)
Query: 23 LGQSHSEAVEAAYKVAIARCEHEKLK-SADACLMEVIGEKNPEHFFVATQDVDLRKKLQE 81
LG+ A A K + C H K S CL+ ++ E NP H+FVATQD +L K++
Sbjct: 72 LGKELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYFVATQDQNLSVKVKR 131
Query: 82 VPGVPLIFGLRNALLLEPPSSFQRKFVKTSE 112
PG+PL+F ++N ++L+ PS FVK E
Sbjct: 132 TPGIPLMFIIQNTIVLDKPSPRTVAFVKAVE 162
Score = 69 (29.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 174 RPQFKRKRAKAPNPLSC--KKKKNHENPSTSSGK 205
R + K+K+ PNPLSC KKKK + S +S K
Sbjct: 192 RRRRKKKKVGGPNPLSCLKKKKKAQDTKSPASEK 225
Score = 34 (17.0 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 178 KRKRAK-APNPLSCKKKKNHE--NPST 201
K+K+A+ +P S KK+K N ST
Sbjct: 211 KKKKAQDTKSPASEKKRKRKRIRNRST 237
>ZFIN|ZDB-GENE-050417-353 [details] [associations]
symbol:utp23 "UTP23, small subunit (SSU) processome
component, homolog (yeast)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-050417-353 eggNOG:COG1412 InterPro:IPR006984
PANTHER:PTHR12416 Pfam:PF04900 EMBL:CR855331 HOGENOM:HOG000239062
HOVERGEN:HBG054456 OrthoDB:EOG41G35D OMA:GLVKNPE
GeneTree:ENSGT00550000074848 IPI:IPI00803616 UniGene:Dr.78006
Ensembl:ENSDART00000031524 Uniprot:B8JIZ4
Length = 257
Score = 154 (59.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 39 IARCEHEKLK-SADACLMEVIGEKNPEHFFVATQDVDLRKKLQEVPGVPLIFGLRNALLL 97
I +C+H K A CL+ ++ E NP H+F+ATQD L L+++PGVPL++ + N ++L
Sbjct: 88 IRKCKHMKDPVPASECLLSMLAETNPHHYFIATQDQQLTTALKKIPGVPLLYIILNTMVL 147
Query: 98 EPPSSFQRKFVK 109
+ PS K V+
Sbjct: 148 DKPSERTLKHVE 159
Score = 65 (27.9 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 178 KRKRAKA-PNPLSC-KKKKNHENP 199
KRKR ++ PNPLSC KKKK P
Sbjct: 194 KRKRKQSNPNPLSCLKKKKKKATP 217
>CGD|CAL0001138 [details] [associations]
symbol:orf19.3724 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] CGD:CAL0001138 eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000127
RefSeq:XP_713413.1 STRING:Q59V16 GeneID:3644926 KEGG:cal:CaO19.3724
Uniprot:Q59V16
Length = 269
Score = 137 (53.3 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 30 AVEAAYKVAIARCEHEKLKSADACLMEVIGEK--NPEHFFVATQDVDLRKKLQEVPGVPL 87
A++ A +C H + C+ ++ K N + VA+QD+ LRKKL+++PGVPL
Sbjct: 77 AIDIAKSFERRKCNHREAIDPSQCIESIVNIKGQNKHRYIVASQDLQLRKKLRKIPGVPL 136
Query: 88 IFGLRNALLLEPPSSFQRKF 107
I+ R+ +++EP S ++
Sbjct: 137 IYMNRSVMVMEPISDVSNQY 156
Score = 64 (27.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 178 KRKRAKAPNPLSCKKKKNHENPSTSS 203
KRK K PNPLS KKKK +N + ++
Sbjct: 197 KRKGPKEPNPLSVKKKKT-DNATAAN 221
>UNIPROTKB|Q59V16 [details] [associations]
symbol:CaO19.3724 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0001138 eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 EMBL:AACQ01000127
RefSeq:XP_713413.1 STRING:Q59V16 GeneID:3644926 KEGG:cal:CaO19.3724
Uniprot:Q59V16
Length = 269
Score = 137 (53.3 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 30 AVEAAYKVAIARCEHEKLKSADACLMEVIGEK--NPEHFFVATQDVDLRKKLQEVPGVPL 87
A++ A +C H + C+ ++ K N + VA+QD+ LRKKL+++PGVPL
Sbjct: 77 AIDIAKSFERRKCNHREAIDPSQCIESIVNIKGQNKHRYIVASQDLQLRKKLRKIPGVPL 136
Query: 88 IFGLRNALLLEPPSSFQRKF 107
I+ R+ +++EP S ++
Sbjct: 137 IYMNRSVMVMEPISDVSNQY 156
Score = 64 (27.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 178 KRKRAKAPNPLSCKKKKNHENPSTSS 203
KRK K PNPLS KKKK +N + ++
Sbjct: 197 KRKGPKEPNPLSVKKKKT-DNATAAN 221
>SGD|S000005530 [details] [associations]
symbol:UTP23 "Component of the small subunit processome,
involved in 40S ribosomal" species:4932 "Saccharomyces cerevisiae"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IDA;IPI] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=IEA] SGD:S000005530
GO:GO:0005739 GO:GO:0005730 EMBL:BK006948 GO:GO:0003723 EMBL:U43491
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE GeneTree:ENSGT00550000074848
HOGENOM:HOG000212592 OrthoDB:EOG4FXVJ0 EMBL:Z74912 PIR:S61987
RefSeq:NP_014646.1 ProteinModelPortal:Q12339 DIP:DIP-4352N
IntAct:Q12339 MINT:MINT-480103 STRING:Q12339 PaxDb:Q12339
PeptideAtlas:Q12339 EnsemblFungi:YOR004W GeneID:854165
KEGG:sce:YOR004W CYGD:YOR004w NextBio:975947 Genevestigator:Q12339
GermOnline:YOR004W Uniprot:Q12339
Length = 254
Score = 145 (56.1 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 51/181 (28%), Positives = 77/181 (42%)
Query: 30 AVEAAYKVAIARCEH--EKLKSADACLMEV--IGEKNPEHFFVATQDVDLRKKLQEVPGV 85
A+ A + RC H + KS C+ V I N + VA+QD+DLR+KL+ VPGV
Sbjct: 77 AINLAKQFERRRCNHSFKDPKSPAECIESVVNISGANKHRYVVASQDIDLRRKLRTVPGV 136
Query: 86 PLIFGLRNALLLEPPSSFQRKFVKTSEEARSCMXXXXXXXXXXXXXNILETKEIGDSSXX 145
PLI R+ +++EP S+ K K +EE + NI + +E GD S
Sbjct: 137 PLIHLTRSVMVMEPLSTASAKASKITEEQK--------LYKGLNDPNIEKLQESGDGSGK 188
Query: 146 XXXXXXXXXXMQADKKTHYARKGM--GVKDRPQFKRKRAKAPNPLSCKKKKNHENPSTSS 203
+A +K D + K +K +K K++ N S+
Sbjct: 189 ESITKKRKLGPKAPNPLSVKKKKKVNSPSDEVKDKEDTSKEKKKRRRRKHKSNTNVPVSN 248
Query: 204 G 204
G
Sbjct: 249 G 249
>POMBASE|SPCC18.12c [details] [associations]
symbol:utp23 "rRNA processing protein Utp23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
PomBase:SPCC18.12c InterPro:IPR006596 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006364 GO:GO:0032040 SMART:SM00670
eggNOG:COG1412 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE PIR:T41155 RefSeq:NP_588391.1
ProteinModelPortal:O74862 STRING:O74862 EnsemblFungi:SPCC18.12c.1
GeneID:2539158 KEGG:spo:SPCC18.12c HOGENOM:HOG000212592
OrthoDB:EOG4FXVJ0 NextBio:20800330 Uniprot:O74862
Length = 260
Score = 141 (54.7 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 57/185 (30%), Positives = 81/185 (43%)
Query: 25 QSHSEAVEAAYKVAIA------RCEH-EKLKSADACLMEV--IGEKNPEHFFVATQDVDL 75
Q +S++ E ++ IA RC H ++ S C+ V I +N + VATQD +L
Sbjct: 68 QLYSKSDELKQEIRIAKSFERRRCGHIDEALSPSECIQSVVNINGRNKHRYVVATQDPEL 127
Query: 76 RKKLQEVPGVPLIFGLRNALLLEPPS--SFQRKFVKTSEEARSCMXXXXXXXXXXXXXNI 133
R+ L+ VPGVPLI+ R+ ++LEP S + K K S + N
Sbjct: 128 RQALRSVPGVPLIYMKRSVVILEPASRATLLEKHNKESVQMGMSKEEKLLLSGKKRSANE 187
Query: 134 LETKEIGDSSXXXXXXXXXXXXMQADKKTHYARKGMGVKDRPQFKRKRAKAPNPLSCKKK 193
L + D+ +A+KK RKG P K PNPLS KK+
Sbjct: 188 LAIDD-QDTKESTDLAGTEDSAPKANKK----RKG------P-------KGPNPLSIKKR 229
Query: 194 --KNH 196
KNH
Sbjct: 230 SSKNH 234
>FB|FBgn0031361 [details] [associations]
symbol:CG17652 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] GO:GO:0006911
EMBL:AE014134 InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900
KO:K14773 OMA:GLVKNPE GeneTree:ENSGT00550000074848
RefSeq:NP_608617.1 UniGene:Dm.18434 ProteinModelPortal:Q9VQ40
IntAct:Q9VQ40 MINT:MINT-330392 STRING:Q9VQ40 PRIDE:Q9VQ40
EnsemblMetazoa:FBtr0077904 EnsemblMetazoa:FBtr0333543 GeneID:33353
KEGG:dme:Dmel_CG17652 UCSC:CG17652-RA FlyBase:FBgn0031361
InParanoid:Q9VQ40 OrthoDB:EOG4WPZJV PhylomeDB:Q9VQ40
GenomeRNAi:33353 NextBio:783162 ArrayExpress:Q9VQ40 Bgee:Q9VQ40
Uniprot:Q9VQ40
Length = 244
Score = 84 (34.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/88 (27%), Positives = 45/88 (51%)
Query: 23 LGQSHSEAVEAAYKVAIARCEHE-KLKSADACLMEVIGEKNPEHFFVATQDVDLRKKLQE 81
LG + A + + +C HE K A C+ + + + VA+QD L++ L++
Sbjct: 72 LGAPLTGATSIVKRFHVHKCGHEGKPVPASECIKSMTKDNR---YVVASQDRLLQESLRK 128
Query: 82 VPGVPLIFGLRNALLLEPPSSFQRKFVK 109
+PG L++ + +LE PS +K+V+
Sbjct: 129 IPGRCLLYLHKATPVLEAPSKASKKWVQ 156
Score = 68 (29.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 160 KKTHYARKGMGVKD-----RPQFKRKRAKAPNPLSCKKKK 194
+K Y ++ G+K +P+ K K K PNPLSCKK K
Sbjct: 169 EKIDYMKEKQGLKPAETAVKPK-KHKGPKNPNPLSCKKSK 207
>DICTYBASE|DDB_G0283685 [details] [associations]
symbol:utp23 "FCF1 family protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0283685
EMBL:AAFI02000056 GenomeReviews:CM000153_GR eggNOG:COG1412
InterPro:IPR006984 PANTHER:PTHR12416 Pfam:PF04900 KO:K14773
RefSeq:XP_638965.1 PRIDE:Q54QQ8 EnsemblProtists:DDB0237573
GeneID:8624211 KEGG:ddi:DDB_G0283685 InParanoid:Q54QQ8
Uniprot:Q54QQ8
Length = 439
Score = 108 (43.1 bits), Expect = 0.00030, P = 0.00030
Identities = 31/90 (34%), Positives = 48/90 (53%)
Query: 28 SEAVEAAYKVAIARCEHEKLKSADACLM-----EVIGEKNPEHFFVATQDVDLRKKLQEV 82
++ + ++ +C+H+ SAD M E I K FF A QD D R L++
Sbjct: 78 NDLISTCKRIEYFQCDHKH--SADEQNMVQKCFEDISIKQSNTFFFAVQDHDHRLLLRKN 135
Query: 83 PGVPLIFGLRNALLLEPP--SSFQRKFVKT 110
PG+P++F L N ++LE P SS+Q +KT
Sbjct: 136 PGIPILFVLTNLIILEKPTTSSYQT-MIKT 164
>ASPGD|ASPL0000059200 [details] [associations]
symbol:AN10052 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001308 InterPro:IPR006984 PANTHER:PTHR12416
Pfam:PF04900 HOGENOM:HOG000212592 EnsemblFungi:CADANIAT00002404
OMA:YVKRSVM Uniprot:C8VU35
Length = 323
Score = 68 (29.0 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 75 LRKKLQEVPGVPLIFGLRNALLLEPPSS 102
LR+ + +PGVP+++ R+ ++LEP S+
Sbjct: 172 LRRGARSIPGVPIVYVKRSVMILEPMSA 199
Score = 63 (27.2 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 170 GVKDRPQFKRKRAKAPNPLSCKK-KKNHENPSTS 202
G + + + + K+AK PNPLS KK KK E +T+
Sbjct: 230 GGEKKKKREPKKAKGPNPLSVKKPKKRVEQKATA 263
Score = 44 (20.5 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 39 IARCEH-EKLKSAD--ACLMEVIG-----EKNPEHFFVATQD 72
+ C H E D +CL+ ++ ++N EH+ +AT D
Sbjct: 96 LRHCSHNEDSTPIDETSCLLSLLSPLSDVKRNKEHYILATAD 137
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.129 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 205 160 0.00097 106 3 11 23 0.40 32
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 555 (59 KB)
Total size of DFA: 133 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.73u 0.14s 13.87t Elapsed: 00:00:00
Total cpu time: 13.73u 0.14s 13.87t Elapsed: 00:00:00
Start: Fri May 10 12:47:14 2013 End: Fri May 10 12:47:14 2013