BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043686
(282 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 175/305 (57%), Gaps = 27/305 (8%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
M++G + HG+ + L LF ++ K I+ D +TF VL ACS +G+V E + +RS
Sbjct: 690 MLVGLAQHGEGKETLQLFKQM-KSLGIKPDKVTFIGVLSACSHSGLVSEA---YKHMRSM 745
Query: 60 -------PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKT 112
P++ H++ + L RAGL +A I+ ME + R LL CR+ +T
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 113 GKRVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQA--------------YSWIEFRN 158
GKRV +L EL+PL + Y++LSN YAA +KWD + A +SWIE +N
Sbjct: 806 GKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Query: 159 KVHVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEI 217
K+H+F D S ++E I+ +++ +++ ++ + P+ DF+L V+EE K + HSE
Sbjct: 866 KIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEK 925
Query: 218 LALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCS 277
LA++FGL+ST I V KNLR+ CH+ K I+K+ EI+++D + FH F+ G CS
Sbjct: 926 LAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICS 985
Query: 278 CRDFW 282
C D+W
Sbjct: 986 CGDYW 990
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 200 bits (509), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 177/302 (58%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI GY +HG + ++LF+++ +++ IE D ++F ++L+ACS +G+V+EGW FN +R
Sbjct: 571 MIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P V H+A +V +LAR G +A FI+ + + ALL GCRIH VK ++
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVV--------------NQAYSWIEFRNKVH 161
V +++ EL+P + Y++++N YA KW+ V N SWIE + +V+
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDE-ERKWTQIGHSEILAL 220
+F GD S P +E I L+ + +M + P ++L +E E++ GHSE LA+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+ G+IS+ G I VTKNLR+ CH+ AK +SK+ EI+++D + FH F+ G CSCR
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 281 FW 282
FW
Sbjct: 870 FW 871
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEG-----WLCFN 55
MI GY+ G + LF E+E++ I D T AVL+ C+ +++EG W+ N
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEG-ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 56 RIRSPKVTHHALMVSVLARAGLFDEARIFIQEYHME 91
+ +ALM + A+ G EA + E ++
Sbjct: 427 DLGFDIFVSNALM-DMYAKCGSMQEAELVFSEMRVK 461
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 168/304 (55%), Gaps = 23/304 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCF------ 54
MI+GY+++G L+LF+ ++ + + + +TF VL ACS AG+V EG F
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEG-LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 55 -NRIRSPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTG 113
++ P+ H+A MV +L R+GL +EA FI++ +E + ALL C +H + G
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILG 400
Query: 114 KRVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNK 159
++V D L E P +++LSN YAA KWD V++ AYS +EF K
Sbjct: 401 QKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGK 460
Query: 160 VHVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIGH-SEIL 218
+H F GD S P+S+ I+ +L ++KK+ P H V+ E K + H SE L
Sbjct: 461 IHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKL 520
Query: 219 ALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSC 278
A++FGLI + G I V KNLR CH F+K +S + EII++D + FHHF G CSC
Sbjct: 521 AIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSC 580
Query: 279 RDFW 282
++FW
Sbjct: 581 KEFW 584
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 167/302 (55%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI GY LHGQ + L++F E+ S I P+TF VL+ACS AG+V+EG FN +
Sbjct: 492 MISGYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P V H+A MV +L RAG A FI+ +E V LL CRIH +
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWD---VVNQ-----------AYSWIEFRNKVH 161
V ++L EL P + +++LSN ++A+ + V Q Y+ IE H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
VF +GD S P+ + I+ +L+ L KM +P+ + +LH V+EE + + HSE LA+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FGLI+T+ G I + KNLR+ CH K ISK+ E I+++D + FHHF+ G CSC D
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 281 FW 282
+W
Sbjct: 791 YW 792
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI GY+ +G E +SLF E++ KS +P+T +L AC+ G + G + +RS
Sbjct: 391 MISGYTQNGLTEDAISLFREMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 60 ---PKVTHHALMVSVLARAGLFDEAR 82
+ ++ + A+ G EAR
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEAR 475
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 172/303 (56%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI Y ++G+ E L F+++EK S I D + F A+++ACS +G+V+EG CF ++++
Sbjct: 581 MIYAYGMYGEGEKALETFADMEK-SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P + H+A +V +L+R+ +A FIQ ++ + ++L CR ++T +R
Sbjct: 640 YKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAER 699
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVV--------------NQAYSWIEFRNKVH 161
V ++ EL P I+ SN YAA KWD V N YSWIE VH
Sbjct: 700 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVH 759
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKP-DFSLHYVDEERKWTQI-GHSEILA 219
VF +GD S P+SE I+ L+ L M + P P + S + +EE K I GHSE LA
Sbjct: 760 VFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLA 819
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++FGL++T+ G + V KNLR+ CH+ K ISK+V EI+++D + FH F+ G CSC+
Sbjct: 820 IAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCK 879
Query: 280 DFW 282
D W
Sbjct: 880 DRW 882
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 171/302 (56%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
+I+G++LHG +SLF E+ K+ ++ + + F AVL ACS G+V+E W FN +
Sbjct: 415 IIMGHALHGHGHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
+ ++ H+A + +L RAG +EA FI + +E V LL C +H ++ ++
Sbjct: 474 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
V +++ + + Y+++ N YA+ +W + + A SWIE +NK H
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTH 593
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILAL 220
F +GD S P + I L+++M++ME + LH VDEE K + GHSE LA+
Sbjct: 594 GFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAV 653
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FG+I+T+ G TI VTKN+R+ CH K ISK+ E EII++D S FHHF G CSC D
Sbjct: 654 AFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGD 713
Query: 281 FW 282
+W
Sbjct: 714 YW 715
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 191 bits (486), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 20/301 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI+GY LHG+ +SL+ +E+ + + +TF +L AC+ +GMV EGW FNR+
Sbjct: 395 MIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 59 --SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRV 116
+P+ H+A ++ +L RAG D+A I+ ++ V ALL C+ H V+ G+
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 117 IDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKVHV 162
QL + P + +Y+ LSN YAA WD V + SW+E R ++
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Query: 163 FGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYV-DEERKWTQIGHSEILALS 221
F GD S PR E I +++ + +++ D SLH + DEE + T HSE +A++
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIA 633
Query: 222 FGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDF 281
+GLIST G + +TKNLR CH K ISK+V+ EI+++D + FHHF+ G CSC D+
Sbjct: 634 YGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Query: 282 W 282
W
Sbjct: 694 W 694
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 170/307 (55%), Gaps = 30/307 (9%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI+GY +HG + + LF E+++ D LTF VL AC+ +G++ EG ++++S
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 60 ----PKVTHHALMVSVLARAGLFDEA-RIFIQEYHMERYPEVLRALLEGCRIHVQVKTGK 114
P + H+A ++ +L RAG D+A R+ +E E + ++LL CRIH ++ G+
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 115 RVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKV 160
+V +L EL+P ENY++LSN YA KW+ V + SWIE KV
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 847
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMK----KMEGDSLRPKPDFSLHYVDEERKWTQI-GHS 215
F G+ R F E++SL K+ RP H + EE K Q+ GHS
Sbjct: 848 FSFVVGE----RFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHS 903
Query: 216 EILALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGF 275
E LAL++GLI T G TI V KNLR+ CH+ AK ISK++E EI+++D FHHF+ G
Sbjct: 904 EKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGV 963
Query: 276 CSCRDFW 282
CSC D+W
Sbjct: 964 CSCGDYW 970
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 164/307 (53%), Gaps = 26/307 (8%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI Y G+ ++LFS+L+ S + D + F L ACS AG++EEG CF +
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQD-SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
+P++ H A MV +L RAG EA FIQ+ ME V ALL CR+H G
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVV--------------NQAYSWIEFRNKVH 161
D+L +L P + Y++LSN YA +W+ V N S +E +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F GD S P+S+ I+ EL L+KKM+ P + +LH V+EE K T + HSE LA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 221 SFGLISTQ-----VGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGF 275
F L++T+ TI +TKNLR+ CH AK IS++ EIII+D + FH F +G
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 276 CSCRDFW 282
CSC D+W
Sbjct: 680 CSCGDYW 686
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 157/303 (51%), Gaps = 21/303 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I GY+ HG E L +F E+ S + + +TF A L ACS AGMVEEG + + S
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P H+A MV +L RAG F+EA I +E V +LL CR H Q+ +
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEF 522
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+L E++P ++ YI+LSN YA++ +W V + SW E NKVH
Sbjct: 523 CAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVH 582
Query: 162 VFGTGDVSC-PRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILA 219
F G ++ P E I L L + P ++LH VDEE K + HSE LA
Sbjct: 583 AFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLA 642
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
+++ L+ G I V KNLR+ CH K ISK+ E EII++D + FHHF G CSC+
Sbjct: 643 VAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCK 702
Query: 280 DFW 282
D+W
Sbjct: 703 DYW 705
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 187 bits (476), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 170/305 (55%), Gaps = 27/305 (8%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI+ + HG E L LF E + D +T+ V AC+ AG+V +G F+ ++
Sbjct: 486 MIIALAQHGHAEEALELF-ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLR--ALLEGCRIHVQVKTG 113
P ++H+A MV + RAGL EA+ FI++ +E P+V+ +LL CR+H + G
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE--PDVVTWGSLLSACRVHKNIDLG 602
Query: 114 KRVIDQLCELKPLSAENYIMLSNWYAAEAKWDVV--------------NQAYSWIEFRNK 159
K ++L L+P ++ Y L+N Y+A KW+ Q +SWIE ++K
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 160 VHVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI--GHSEI 217
VHVFG D + P I+ ++ + +++ P LH ++EE K QI HSE
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVK-EQILRHHSEK 721
Query: 218 LALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCS 277
LA++FGLIST T+ + KNLR+ + CH K ISK+V EII++D + FHHF+ GFCS
Sbjct: 722 LAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCS 781
Query: 278 CRDFW 282
CRD+W
Sbjct: 782 CRDYW 786
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 170/300 (56%), Gaps = 23/300 (7%)
Query: 4 GYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR----S 59
G ++HG+ + + +F ++ ++ ++ D LTF AVL ACS +G+V+EGW CF+ +R
Sbjct: 326 GLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
Query: 60 PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRVIDQ 119
PKV H+A MV +L RAGL +EA I ++E + VL +LL C +H +V+ +R+ +
Sbjct: 384 PKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRE 443
Query: 120 LCELKPLSAENYIMLSNWYAAEAKWDVVN--------------QAYSWIEFRNKVHVFGT 165
L ++ P + E I++SN Y AE + D+ + S I + VH F +
Sbjct: 444 LIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSS 503
Query: 166 GDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVD---EERKWTQIGHSEILALSF 222
GD S PR++ I+ +L +++++ P + + + EE++ HSE LA+ F
Sbjct: 504 GDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCF 563
Query: 223 GLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDFW 282
GL+ T+ + V KNLR+ CH K +SK+ + EIII+D + FH F+ G CSC D+W
Sbjct: 564 GLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 165/303 (54%), Gaps = 21/303 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKS-SIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS 59
+I GY+ GQ ++ L+LF E+ + + +TF ++L ACS AG VE G F+ +RS
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 60 -----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGK 114
P H++ +V +L RAG+ + A FI++ ++ V AL CR+H + + G
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 115 RVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKV 160
+ L +L P + N+++LSN +AA +W N YSWI +N+V
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIGH-SEILA 219
H F D S ++ I L L +ME +P SL+ ++EE K ++ H SE LA
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLA 621
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
L+FGL+S + I +TKNLR+ CH F K +S V+ EII++D + FH F+ G CSC+
Sbjct: 622 LAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCK 681
Query: 280 DFW 282
D+W
Sbjct: 682 DYW 684
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 167/303 (55%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFN-RIR- 58
MI GY+ HGQ L +F E+ KK +++D +TF V AC+ AG+VEEG F+ +R
Sbjct: 567 MISGYAQHGQAMKALDVFKEM-KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
+P H++ MV + +RAG ++A I+ + R +L CR+H + + G+
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWD-------VVNQ-------AYSWIEFRNKVH 161
+++ +KP + Y++LSN YA W ++N+ YSWIE +NK +
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F GD S P + I+ +L+ L +++ P + L +D+E K + HSE LA+
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAI 805
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEY-GFCSCR 279
+FGLI+T G+ + + KNLR+ CH K I+K+ E EI+++D + FHHF G CSC
Sbjct: 806 AFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCG 865
Query: 280 DFW 282
DFW
Sbjct: 866 DFW 868
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTA------GMVEEGWLCF 54
M+ GY+ G+ E + +F EL K I+ + TF+++L+ C+ G G+
Sbjct: 465 MLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 55 NRIRSPKVTHHALMVSVLARAGLFDEA 81
+R+ S AL+ ++ A+ G + A
Sbjct: 524 SRLDSSLCVSSALL-TMYAKKGNIESA 549
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 162/299 (54%), Gaps = 21/299 (7%)
Query: 4 GYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR----- 58
G+S+HG+ + +S+F L ++ ++ D ++F ++L AC G+ +EGW F +
Sbjct: 463 GFSMHGKAKEVMSIFESL-MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGI 521
Query: 59 SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRVID 118
P++ H++ MV++L RAG EA I+E E V ALL CR+ V + +
Sbjct: 522 KPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAE 581
Query: 119 QLCELKPLSAENYIMLSNWYAAEAKWDVV--------------NQAYSWIEFRNKVHVFG 164
+L L+P + Y++LSN YAA+ W V N SWI+ +N+V+
Sbjct: 582 KLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLL 641
Query: 165 TGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILALSFG 223
GD S P+ + I ++ + K+M RP DF+LH V+E+ + + GHSE LA+ FG
Sbjct: 642 AGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFG 701
Query: 224 LISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDFW 282
L++T G + V KNLR+ CH K IS EI I+D + FHHF+ G CSC DFW
Sbjct: 702 LLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 159/303 (52%), Gaps = 21/303 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRI--- 57
M++GYS HG L LF + + ++ D +T AVL CS M + G F+ +
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG 385
Query: 58 ---RSPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGK 114
P H+ +V +L RAG DEA FI+ + VL +LL CR+H+ V G+
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445
Query: 115 RVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKV 160
V +L E++P +A NY++LSN YA+ +W VN SWI+ +
Sbjct: 446 SVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTL 505
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILA 219
H F D + PR E + +++ + KM+ P L+ VDEE+K + GHSE LA
Sbjct: 506 HYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLA 565
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
L+FGLI+T G I V KNLR+ CH+FAK SK+ E E+ ++D + FH G CSC
Sbjct: 566 LTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCG 625
Query: 280 DFW 282
D+W
Sbjct: 626 DYW 628
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 184 bits (466), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 168/302 (55%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
++ GY +HG E L +F E+ ++ ++D +T VL+ACS +GM+++G FNR++
Sbjct: 550 LMTGYGMHGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
SP H+A +V +L RAG + A I+E ME P V A L CRIH +V+ G+
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+++ EL +Y +LSN YA +W V + SW+E
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILAL 220
F GD + P ++ I+ L M++++ P+ F+LH VD+E K + HSE LAL
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
++G+++T GA I +TKNLR+ CH +S++++ +II++D S FHHF+ G CSC+
Sbjct: 789 AYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKG 848
Query: 281 FW 282
+W
Sbjct: 849 YW 850
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I + HG E + LF E+ + ++ D +TF +L ACS +G+V+EG CF +++
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTD 581
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P + H+ MV + RAG + A FI+ ++ + ALL CR+H V GK
Sbjct: 582 YGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKI 641
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+ L E++P +++LSN YA+ KW+ V++ +S +E NKV
Sbjct: 642 ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVE 701
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYV-DEERKWTQIGHSEILAL 220
VF TG+ + P E ++ EL +L K++ P F L V D+E++ + HSE LA+
Sbjct: 702 VFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAI 761
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+F LI+T TI + KNLR+ CH K ISK+ E EII++D + FHHF+ G CSC D
Sbjct: 762 AFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGD 821
Query: 281 FW 282
+W
Sbjct: 822 YW 823
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRSP 60
+I GY+ +G + +++ +E++ I + T+ +VL ACS AG + +G R+
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 61 KVTHHALMVSVLA 73
+ +V+ LA
Sbjct: 481 GLYLDVFVVTSLA 493
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 163/302 (53%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRI--- 57
+I Y +HG + + +F E+ + P+TF +VL ACS G+VEEG F +
Sbjct: 357 LISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 58 --RSPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P++ H+A MV +L RA DEA +Q+ E P+V +LL CRIH V+ +R
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAER 475
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAYS--------------WIEFRNKVH 161
+L L+P +A NY++L++ YA WD V + W+E R K++
Sbjct: 476 ASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMY 535
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVD-EERKWTQIGHSEILAL 220
F + D P E I L L + M+ P+ L+ ++ EE++ +GHSE LAL
Sbjct: 536 SFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLAL 595
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FGLI+T G I +TKNLR+ CH F K ISK +E EI+++D + FH F+ G CSC D
Sbjct: 596 AFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGD 655
Query: 281 FW 282
+W
Sbjct: 656 YW 657
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 172/306 (56%), Gaps = 25/306 (8%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI GY+ HGQ E L LF ++ D +TF VL ACS AG++EEG+ F +
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDS 750
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGC-RIH-VQVKTG 113
+P++ H + M VL RAG D+ FI++ M+ + R +L C R + + + G
Sbjct: 751 YGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 810
Query: 114 KRVIDQLCELKPLSAENYIMLSNWYAAEAKW-------------DVVNQA-YSWIEFRNK 159
K+ + L +L+P +A NY++L N YAA +W DV +A YSW+ ++
Sbjct: 811 KKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDG 870
Query: 160 VHVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEIL 218
VH+F GD S P ++ I+ +L+ L +KM P+ F+L+ +++E K + HSE L
Sbjct: 871 VHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKL 930
Query: 219 ALSFGLISTQVGAT--IHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFC 276
A++F +++ Q +T I + KNLR+ CH K ISK+ +II++D + FHHF+ G C
Sbjct: 931 AVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGAC 989
Query: 277 SCRDFW 282
SC DFW
Sbjct: 990 SCSDFW 995
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 165/304 (54%), Gaps = 23/304 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I G +++G + + F+E+ K I + T +L ACS +G+V EG + F+R+RS
Sbjct: 289 LISGLAMNGFGKEAIEAFNEM-LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSG 347
Query: 60 -----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGK 114
P + H+ +V +L RA L D+A I+ M+ + R LL CR+H V+ G+
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGE 407
Query: 115 RVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKV 160
RVI L ELK A +Y++L N Y+ KW+ V + S IE + V
Sbjct: 408 RVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTV 467
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVD--EERKWTQIGHSEIL 218
H F DVS PR E I+ L + ++++ + LH ++ EE+ + HSE L
Sbjct: 468 HEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKL 527
Query: 219 ALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSC 278
A++FG++ T G TI VTKNLR CH+FAK +S + + +I++D S FHHF+ G CSC
Sbjct: 528 AIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSC 587
Query: 279 RDFW 282
DFW
Sbjct: 588 NDFW 591
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 163/301 (54%), Gaps = 20/301 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRSP 60
MI GY HG + L LF E++K +I+ + +TF +V+ ACS +G+VE G CF ++
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKEN 568
Query: 61 -----KVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
+ H+ MV +L RAG +EA FI + ++ V A+L C+IH V ++
Sbjct: 569 YSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEK 628
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKVH 161
++L EL P +++L+N Y A + W+ V Q S +E +N+VH
Sbjct: 629 AAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVH 688
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIGHSEILALS 221
F +G + P S+ I+ L+ L+ ++ P + L ++ ++ HSE LA+S
Sbjct: 689 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAIS 748
Query: 222 FGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDF 281
FGL++T G TIHV KNLR+ CH+ K IS + EI+++D FHHF+ G CSC D+
Sbjct: 749 FGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDY 808
Query: 282 W 282
W
Sbjct: 809 W 809
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 162/303 (53%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCF----NR 56
M+ Y+ HG + F EL I D +TF +L+ACS +G+VEEG F R
Sbjct: 307 MLAAYATHGFGRDAIKHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 57 IR-SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
R P++ H++ MV +L R+GL +A I+E ME V ALL CR++ + G +
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 425
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWD--------------VVNQAYSWIEFRNKVH 161
++L EL+P NY+MLSN Y+A W V S+IE NK+H
Sbjct: 426 AAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIH 485
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGD-SLRPKPDFSLHYVDEERKWTQIG-HSEILA 219
F GD S P SE I +L+ + KKM+ + + K +F LH V E+ K I HSE +A
Sbjct: 486 KFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIA 545
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++FGL+ I + KNLR+ CH+ AKAIS + + III+D FHHF G CSC
Sbjct: 546 MAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCS 605
Query: 280 DFW 282
D+W
Sbjct: 606 DYW 608
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 158/302 (52%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI GY +HG L LF + S + + +TF +VL ACS AG+ EGW FN ++
Sbjct: 359 MIAGYGMHGHAAKALELFPAM-IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P + H+ MV +L RAG +A IQ M+ + +LL CRIH V+ +
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+ +L EL + Y++LS+ YA +W V + +S +E +VH
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVH 537
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERK-WTQIGHSEILAL 220
VF GD P+ E I+ L L +K+ H VDEE K T HSE LA+
Sbjct: 538 VFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAI 597
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FG+++T G+T++V KNLR+ CH+ K ISK+V+ E +++D FHHF+ G CSC D
Sbjct: 598 AFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGD 657
Query: 281 FW 282
+W
Sbjct: 658 YW 659
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 157/301 (52%), Gaps = 21/301 (6%)
Query: 2 ILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR--- 58
I G + +G +L ++F + EK I D TF +L C AG++++G FN I
Sbjct: 386 ISGLAKNGHVKLSFAVFGQTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 59 --SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRV 116
V H+ MV + RAG+ D+A I + M V ALL GCR+ + + V
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 117 IDQLCELKPLSAENYIMLSNWYAAEAKWD-------VVNQ-------AYSWIEFRNKVHV 162
+ +L L+P +A NY+ LSN Y+ +WD ++N+ YSWIE KVH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 163 FGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILALS 221
F D S P S+ I+ +L+ L +M P +F V+EE K +G HSE LA++
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVA 624
Query: 222 FGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDF 281
GLIST G I V KNLR+ CH+ K ISK+ EI+++D + FH F G CSC D+
Sbjct: 625 LGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
Query: 282 W 282
W
Sbjct: 685 W 685
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
+I GY+ HG +S F E++K I+ + +TF AVL ACS G+VEEG L F +
Sbjct: 319 LISGYAYHGHGREAISKFMEMQK-MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P + H+ +V +L RAGL DEA+ FIQE ++ + ALL+ CRIH ++ G+
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKVH 161
+ + L + P Y+ +N +A + KWD + S I H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPK-PDFSLHYVDE-ERKWTQIGHSEILA 219
F GD S P E I + + + +K+E + P+ + L VD+ ER+ HSE LA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
+++GLI T+ G I + KNLR+ CH K ISK+ + +I+++D + FHHF G CSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 280 DFW 282
D+W
Sbjct: 618 DYW 620
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEG-----WLCFN 55
MI GY + L LF E++ S +E D ++ A L AC+ G +E+G +L
Sbjct: 218 MISGYVQADMNKEALQLFHEMQN-SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT 276
Query: 56 RIRSPKVTHHALMVSVLARAGLFDEA 81
RIR V +++ + A+ G +EA
Sbjct: 277 RIRMDSVL-GCVLIDMYAKCGEMEEA 301
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 174 bits (441), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 167/304 (54%), Gaps = 24/304 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I+G +++G + + LF +E + +TF +L+ACS GMV+EG+ F R+R
Sbjct: 294 LIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P++ H MV +LARAG +A +I+ M+ + R LL C +H +
Sbjct: 354 YKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEF 413
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
Q+ +L+P + +Y++LSN YA+E +W V + +S +E N+VH
Sbjct: 414 ARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVH 473
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVD---EERKWTQIGHSEIL 218
F GD S P+S+ I+ +L+ + ++ + P+ S YVD EE++ + HSE +
Sbjct: 474 EFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ--ISNVYVDVEEEEKENAVVYHSEKI 531
Query: 219 ALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSC 278
A++F LIST + I V KNLR+ CH K +SK+ EI+++D S FHHF+ G CSC
Sbjct: 532 AIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSC 591
Query: 279 RDFW 282
+D+W
Sbjct: 592 QDYW 595
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 165/302 (54%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI GY+ HG + L LF E+ + I D +TF AVL AC+ AG+V G F +
Sbjct: 356 MISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P+ H+ MV +L RAG +EA I+ + V LL CR+H V+ +
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
++L +L +A Y+ L+N YA++ +W+ V + YSWIE RNKVH
Sbjct: 475 AAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVH 534
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILAL 220
F + D P + I +L+ L KKM+ +P+ +F+LH V+EE+K + HSE LA+
Sbjct: 535 HFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAV 594
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FG I G+ I V KNLR+ CH K IS++ + EII++D + FHHF+ G CSC D
Sbjct: 595 AFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGD 654
Query: 281 FW 282
+W
Sbjct: 655 YW 656
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI GYS HG E+ L F + K+ ++ D T AVL ACS G+V++G F +
Sbjct: 481 MIAGYSRHGFGEVALRFFESM-KREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 539
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P H+A MV +L RAGL ++A ++ E + LL R+H + +
Sbjct: 540 YGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET 599
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
D++ ++P ++ Y++LSN YA+ +W V + YSWIE +NK H
Sbjct: 600 AADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTH 659
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F GD P + IF L+ L +M+ K LH V+EE K + HSE LA+
Sbjct: 660 TFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAV 719
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
++G++ G I V KNLR+ CH+ K ++++ II++D + FHHF+ G CSC D
Sbjct: 720 AYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGD 779
Query: 281 FW 282
+W
Sbjct: 780 YW 781
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 158/306 (51%), Gaps = 25/306 (8%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI G++ HG L F+++ ++ ++ + +T+ A+L ACS G+V EGW FN +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYED 604
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
PK+ H+A MV +L RAGL +A FI + V R L CR+H + GK
Sbjct: 605 HKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKL 664
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWD--------------VVNQAYSWIEFRNKVH 161
++ EL P YI LSN YA KW+ V SWIE +K+H
Sbjct: 665 AARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIH 724
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-----HSE 216
F GD + P + I+ EL L+ +++ P D LH ++EE + HSE
Sbjct: 725 KFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSE 784
Query: 217 ILALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFC 276
+A++FGLIST + V KNLR+ CH+ K IS + EI+++D + FHHF+ G C
Sbjct: 785 KIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKC 844
Query: 277 SCRDFW 282
SC D+W
Sbjct: 845 SCNDYW 850
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 171 bits (433), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 156/303 (51%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I HG + ++ E+ KK I D +T VL ACS AG+V++G F+ + +
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETV 547
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P H+A ++ +L R+G F +A I+ + E+ ALL GCR+H ++ G
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
D+L L P Y++LSN +AA +W+ V + A SWIE +VH
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYV--DEERKWTQIGHSEILA 219
F D S P +E ++ LQ L K+M P F LH V D ++ HSE +A
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIA 727
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++FGL+ G TI + KNLR CH+F + +S +V+ +II++D FHHF G CSC
Sbjct: 728 VAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCG 787
Query: 280 DFW 282
+FW
Sbjct: 788 NFW 790
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRI-RS 59
MI GY G + L + + S IE+D T+ +V+ AC+TAG+++ G + R
Sbjct: 257 MISGYVNRGFYQEALEMVRRM-VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 60 PKVTHH--ALMVSVLARAGLFDEARIFIQE 87
+ H +VS+ + G FDEAR ++
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEK 345
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 170 bits (431), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 165/302 (54%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI G +LHG+ E L +FS++ K+ +E D + + +VL+ACS +G+V+EG F +
Sbjct: 306 MISGLALHGEGESALRMFSKMIKEG-LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE 364
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P H+ +V +L RAGL +EA IQ +E+ + R L CR+ ++ G+
Sbjct: 365 GKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQI 424
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+L +L + +Y+++SN Y+ WD V + +S +E + K H
Sbjct: 425 AAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTH 484
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILAL 220
F + D S P+ + I+ L + +++ + P L VDEE K ++ GHS+ +A+
Sbjct: 485 RFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAI 544
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FGL+ T G+ I + +NLRM CH + K IS + E EI+++D + FH F+ G CSC+D
Sbjct: 545 AFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKD 604
Query: 281 FW 282
+W
Sbjct: 605 YW 606
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 170 bits (431), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 162/303 (53%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI+ Y+ HG+ E + +F + + +++ D +TF +L+ACS G VEEG F+++ S
Sbjct: 302 MIVAYANHGKAEKSMLMFERM-RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P + H+ MV +L+RAG ++A FI + + P + R LL C H + ++
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEK 420
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
V +++ EL +Y++LSN YA KW+ V+ S IE N VH
Sbjct: 421 VSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVH 480
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLH--YVDEERKWTQIGHSEILA 219
F +GD + + L ++K+++ P +H D+E++ T HSE LA
Sbjct: 481 EFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLA 540
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++FGL++T G TI V KNLR+ CH+ AK IS + +++++D FHHFE G CSC
Sbjct: 541 ITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCG 600
Query: 280 DFW 282
DFW
Sbjct: 601 DFW 603
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 24/304 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI Y +HG + + LF ++ + ++ D ++F A+L+ACS AG+++EG F +I
Sbjct: 659 MINAYGMHGCGKAAVELFDKM-RHENVSPDHISFLALLYACSHAGLLDEGR-GFLKIMEH 716
Query: 60 -----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGK 114
P H+ +V +L RA EA F++ E EV ALL CR H + + G+
Sbjct: 717 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 776
Query: 115 RVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKV 160
+L EL+P + N +++SN +A + +W+ V + SWIE KV
Sbjct: 777 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV 836
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMKKMEGD-SLRPKPDFSLHYVDEERKWTQI-GHSEIL 218
H F D S P S+ I+ +L + +K+E + F LH VDE K + GHSE +
Sbjct: 837 HKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERI 896
Query: 219 ALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSC 278
A+++GL+ T A + +TKNLR+ CH F K +SK+ +I+++D + FHHFE G CSC
Sbjct: 897 AIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSC 956
Query: 279 RDFW 282
D W
Sbjct: 957 GDSW 960
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 166/303 (54%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI G ++HG + +F ++++ ++++ + +TF V ACS G+V+E F+++ S
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQE-ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P+ H+A +V VL R+G ++A FI+ + V ALL C+IH + +
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+L EL+P + +++LSN YA KW+ V++ S IE +H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEE--RKWTQIGHSEILA 219
F +GD + P SE ++ +L +M+K++ + P+ L ++EE ++ + HSE LA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
+ +GLIST+ I V KNLR+ CH AK IS++ + EII++D FHHF G CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 280 DFW 282
DFW
Sbjct: 736 DFW 738
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRSP 60
+I Y +G+ L +F EL+ + +++++ +T + L AC+ G +E G + I+
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 61 KVTHHALMVSVL----ARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRV 116
+ + + S L ++ G +++R +R V A++ G +H G
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH---GCGNEA 450
Query: 117 IDQLCELKPLSAE-NYIMLSNWYAAEAKWDVVNQAYS 152
+D +++ + + N + +N + A + +V++A S
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 157/303 (51%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
+I ++ +G E + F+++ +S ++ D ++ VL ACS G VE+G F +
Sbjct: 524 LISAHADNGDGEAAIGAFAKM-IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPI 582
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
+PK H+A M+ +L R G F EA + E E + ++L CRIH +R
Sbjct: 583 YGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAER 642
Query: 116 VIDQLCELKPL-SAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKV 160
++L ++ L A Y+ +SN YAA +W+ V AYSW+E +K+
Sbjct: 643 AAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKI 702
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILA 219
HVF + D + P + I ++ L ++E + +P + VDE+ K + HSE LA
Sbjct: 703 HVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLA 762
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++F LIST G I V KNLR CH K ISK+V+ EI ++D S FHHF G CSC
Sbjct: 763 VAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCG 822
Query: 280 DFW 282
D+W
Sbjct: 823 DYW 825
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 161/302 (53%), Gaps = 20/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI Y HGQ + + LF+ + +++++EI+ + F +L+ACS +G+ ++G F+ +
Sbjct: 349 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 408
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P + H+ +V +L RAG D+A I+ ++ + + LL C IH + +R
Sbjct: 409 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 468
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
V ++ ++ P + Y++L+N +A+ +W V++ SW E + +VH
Sbjct: 469 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 528
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQ-IGHSEILAL 220
F GD S +S+ I+ L+ L +M+ +P LH +DEE K + + HSE LA+
Sbjct: 529 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAV 588
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+F L+ GA I + KNLR+ CH K IS + EI ++D S FHHF G CSC D
Sbjct: 589 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 648
Query: 281 FW 282
+W
Sbjct: 649 YW 650
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 167 bits (423), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI Y HG + + LF+++E + +TF AVL AC+ AG+VEEG + R+
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHME---RYPEVLRALLEGCRIHVQVKT 112
P V HH MV +L RAG DEA FI + P + A+L C++H
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 113 GKRVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRN 158
G + +L L+P + +++MLSN YA K D V+ YS IE N
Sbjct: 400 GVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Query: 159 KVHVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEI 217
K ++F GD S + I+ L++L+ + + P + +H V+EE K + HSE
Sbjct: 460 KTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEK 519
Query: 218 LALSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCS 277
LA++FGL+ T V I + KNLR+ CH K IS + +I ++D FHHF+ G CS
Sbjct: 520 LAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCS 578
Query: 278 CRDFW 282
C D+W
Sbjct: 579 CLDYW 583
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 167 bits (423), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 160/302 (52%), Gaps = 20/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI GY++HG + L LF+E++ + ++ +TF L AC+ AG+V EG F +
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
PK+ H+ +VS+L RAG A I+ +M+ + ++L C++H GK
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+ + L L ++ Y++LSN YA+ ++ V + S IE NKVH
Sbjct: 451 IAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F GD +S+ I+ L+ + ++++ P + L ++E K + HSE LA+
Sbjct: 511 EFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAI 570
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
++GLIST+ G+ + + KNLR+ CH K ISK+ +I+++D + FHHF G CSC D
Sbjct: 571 AYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGD 630
Query: 281 FW 282
FW
Sbjct: 631 FW 632
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEG-WL 52
MI GY+ HG L LF +L + + D +T A L ACS G +E G W+
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I YS HG L F ++ S++ + +T VL ACS G+V++G F + S
Sbjct: 764 IINAYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 822
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
PK H+ +V +L RAGL A+ FIQE ++ V R LL C +H ++ G+
Sbjct: 823 YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 882
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVN--------------QAYSWIEFRNKVH 161
L EL+P + Y++LSN YA KWD + SWIE +N +H
Sbjct: 883 AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 942
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F GD + P ++ I Q L K+ L+ + E+K I HSE LA+
Sbjct: 943 SFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAI 1002
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
SFGL+S I+V KNLR+ + CH + K +SK+ EII++D FHHFE G CSC+D
Sbjct: 1003 SFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKD 1062
Query: 281 FW 282
+W
Sbjct: 1063 YW 1064
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 161/302 (53%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
+I G++ H + + + LF ++++ + + +TF+++L C G+VEEG F +R
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTT 393
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
SP V H++ MV +L RAGL EA I+ + + +LL CR++ ++ +
Sbjct: 394 YGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEV 453
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKVH 161
++L EL+P +A N+++LSN YAA +W+ + ++ SWI+ ++KVH
Sbjct: 454 AAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVH 513
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILAL 220
F G+ PR I L +L+ K +P + LH V+ +K + HSE LAL
Sbjct: 514 TFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLAL 573
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
FGL+ + + + KNLR+ CH+F KA S II++D + FHHF G CSC D
Sbjct: 574 VFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGD 633
Query: 281 FW 282
FW
Sbjct: 634 FW 635
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 153/299 (51%), Gaps = 20/299 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
++ GYS GQ + + LF + KS + D +TF ++L CS + MV +G + F+++
Sbjct: 569 LLTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDY 627
Query: 59 --SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRV 116
+P + H+A +V +L RAG EA FIQ+ + P V ALL CRIH ++ G+
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 117 IDQLCELKPLSAENYIMLSNWYAAEAKWD--------------VVNQAYSWIEFRNKVHV 162
+ EL S YI+L N YA KW V+ SW+E + KVH
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 163 FGTGDVSCPRSEGIFWELQSLMKKMEGDSL-RPKPDFSLHYVDEERKWTQIGHSEILALS 221
F + D P+++ I L+ +KM L + S+ + R GHSE A++
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIA 807
Query: 222 FGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
FGLI+T G I VTKNL M CHD K ISK V EI ++D FHHF+ G CSC D
Sbjct: 808 FGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 163/301 (54%), Gaps = 20/301 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
++ Y+ HG + + F E+ ++ I + ++F +VL ACS +G+++EGW + ++
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEM-RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 60 ---PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRV 116
P+ H+ +V +L RAG + A FI+E +E + +ALL CR+H + G
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYA 452
Query: 117 IDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVHV 162
+ + EL P +++L N YA+ +W+ + A SW+E N +H+
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 163 FGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILALS 221
F D P+ E I + + ++ K++ P + +VD++ + + HSE +AL+
Sbjct: 513 FVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
Query: 222 FGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRDF 281
F L++T G+TIH+ KN+R+ CH K SK+V EII++D + FHHF+ G CSC+D+
Sbjct: 573 FALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Query: 282 W 282
W
Sbjct: 633 W 633
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 160/303 (52%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I+ Y +HG + + L + + ++ + +TF +V ACS +GMV+EG F ++
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPD 647
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHME-RYPEVLRALLEGCRIHVQVKTGK 114
P H+A +V +L RAG EA + + +LL RIH ++ G+
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGE 707
Query: 115 RVIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKV 160
L +L+P A +Y++L+N Y++ WD + SWIE ++V
Sbjct: 708 IAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEV 767
Query: 161 HVFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILA 219
H F GD S P+SE + L++L ++M + P LH V+E+ K + GHSE LA
Sbjct: 768 HKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLA 827
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++FG+++T G I V KNLR+ + CH K ISK+V+ EII++D FH F+ G CSC
Sbjct: 828 IAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCG 887
Query: 280 DFW 282
D+W
Sbjct: 888 DYW 890
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 164 bits (416), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 164/302 (54%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI G+++HG+ + LFS + +K I+ D +TF +L ACS +GM++ G F +
Sbjct: 441 MIFGFAMHGRADASFDLFSRM-RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
+PK+ H+ M+ +L +GLF EA I ME + +LL+ C++H V+ G+
Sbjct: 500 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 559
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQAY--------------SWIEFRNKVH 161
+ L +++P + +Y++LSN YA+ +W+ V + S IE + VH
Sbjct: 560 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIGH-SEILAL 220
F GD PR+ I+ L+ + +E P L ++EE K + H SE LA+
Sbjct: 620 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 679
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FGLIST+ G + + KNLR+ CH+ K ISK+ + EII +D + FHHF G CSC D
Sbjct: 680 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 739
Query: 281 FW 282
+W
Sbjct: 740 YW 741
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 159/303 (52%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
+I G ++HG + FS++ I D +TF AVL ACS G+VE+G + ++
Sbjct: 321 IIKGLAVHGHAHKAMHYFSQMISLGFIPRD-VTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P++ H+ +V +L RAG EA FI + H++ +L ALL C+I+ + +R
Sbjct: 380 HGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
V + L ++KP + Y++LSN YA +WD + +S IE K++
Sbjct: 440 VGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKIN 499
Query: 162 VFGTGD-VSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILA 219
F GD P I + + ++ K+ + + VDEE K + I HSE LA
Sbjct: 500 KFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLA 559
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
+++G++ T+ G TI + KNLR+ CH K IS++ E+I++D + FHHF G CSCR
Sbjct: 560 IAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCR 619
Query: 280 DFW 282
D+W
Sbjct: 620 DYW 622
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 156/303 (51%), Gaps = 22/303 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
M+ Y+++G E ++LF E +S + D +TF A+L CS G+ E G F R++
Sbjct: 409 MLNCYAINGNIEEVINLF-EWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
SP + H+A +V +L RAG EA I+ + + +LL CR+H V G+
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
+L L+P + NY+M+SN YA WD V++ SW++ ++K+
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQ 587
Query: 162 VFGTGDVSCPRSEGIFWEL-QSLMKKMEGDSLRPKPDFSLHYVDEERKWTQI-GHSEILA 219
+F G R+ + ++ L + +E P LH VDEE K + GHSE LA
Sbjct: 588 IFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLA 647
Query: 220 LSFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCR 279
++ LI T G I +TKNLR+ CH + K +S++ I+++D FHHF G CSC+
Sbjct: 648 TTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCK 707
Query: 280 DFW 282
D+W
Sbjct: 708 DYW 710
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 164 bits (414), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRS- 59
MI G+++HGQ + F ++ +++ + + + +L ACS G+VEEG F+++ S
Sbjct: 346 MINGFAIHGQAGDAIDCFCKM-RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSV 404
Query: 60 ----PKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P++ H+ MV +L R+GL DEA FI ++ + +ALL CR+ V+ GKR
Sbjct: 405 DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKR 464
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
V + L ++ P + Y+ LSN YA++ W V++ S I+ +H
Sbjct: 465 VANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLH 524
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F D S P+++ I L + K+ RP L ++EE K + HSE +A
Sbjct: 525 EFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIAT 584
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FGLIST G I + KNLR+ CH K ISK+ + +I ++D FHHF+ G CSC D
Sbjct: 585 AFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMD 644
Query: 281 FW 282
+W
Sbjct: 645 YW 646
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEG-WLCF----N 55
MI GYSL+G + + +F E+ KK I + +T +VL A S G +E G WL +
Sbjct: 245 MISGYSLNGFFKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 56 RIRSPKVTHHALMVSVLARAGLFDEA-RIFIQEYHMERYPE----VLRALLEGCRIHVQV 110
IR V AL + + ++ G+ ++A +F ER P A++ G IH Q
Sbjct: 304 GIRIDDVLGSAL-IDMYSKCGIIEKAIHVF------ERLPRENVITWSAMINGFAIHGQA 356
Query: 111 KTGKRVIDQLCELK 124
ID C+++
Sbjct: 357 GDA---IDCFCKMR 367
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 71/189 (37%), Gaps = 31/189 (16%)
Query: 13 LGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIRSPKVTHHALMVSVL 72
+ ++LF E+ +E + TF +VL AC+ G ++EG ++S L
Sbjct: 110 IAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNL 169
Query: 73 AR----AGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKRVIDQLCELKPLSA 128
R G +AR+ + +E+ + V T +R D L +
Sbjct: 170 VRMYVMCGFMKDARVLFYKNIIEK--------------DMVVMTDRRKRDGEIVLWNVMI 215
Query: 129 ENYIMLSNWYAAEAKWDVVNQ--AYSWIEFRNKVHVFGTGDVSCPRSEGIFWELQSLMKK 186
+ Y+ L + AA +D + Q SW +S G F + + ++
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTM-----------ISGYSLNGFFKDAVEVFRE 264
Query: 187 MEGDSLRPK 195
M+ +RP
Sbjct: 265 MKKGDIRPN 273
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 164 bits (414), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 150/302 (49%), Gaps = 21/302 (6%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI G + +G + L LF + K S + + +T VL ACS AG++E+GW F ++
Sbjct: 330 MISGLAQNGYSQEALKLFERM-KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
P H+ M+ +L +AG D+A + E E R LL CR+ + +
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEY 448
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
++ L P A Y +LSN YA KWD V + SWIE ++H
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIGH-SEILAL 220
F GD S P+ + +L L+ ++ G P+ +F L ++ E+ + H SE LAL
Sbjct: 509 AFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLAL 568
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
+FGL++ + I + KNLR+ CH F K SK+ I+I+DP +HHF+ G CSC D
Sbjct: 569 AFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGD 628
Query: 281 FW 282
+W
Sbjct: 629 YW 630
>sp|Q9FI49|PP428_ARATH Pentatricopeptide repeat-containing protein At5g50990
OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2
Length = 534
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 24/302 (7%)
Query: 1 MILGYSLHGQRELGLSLFSELEKKSSIEIDPLTFAAVLHACSTAGMVEEGWLCFNRIR-- 58
MI G++ HG + +FSE+E + + D +TF +L CS G++EEG F +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEH-VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 59 ---SPKVTHHALMVSVLARAGLFDEARIFIQEYHMERYPEVLRALLEGCRIHVQVKTGKR 115
PK+ H+ MV +L RAG EA I+ +E + R+LL R + + G+
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 116 VIDQLCELKPLSAENYIMLSNWYAAEAKWDVVNQ--------------AYSWIEFRNKVH 161
I L + K + +Y++LSN Y++ KW+ + SW+EF +H
Sbjct: 356 AIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIH 412
Query: 162 VFGTGDVSCPRSEGIFWELQSLMKKMEGDSLRPKPDFSLHYVDEERKWTQIG-HSEILAL 220
F GD S ++ I+ L+ L++K + D L V EE K + HSE LAL
Sbjct: 413 RFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 472
Query: 221 SFGLISTQVGATIHVTKNLRMRHICHDFAKAISKMVEGEIIIKDPSCFHHFEYGFCSCRD 280
++ ++ + G I + KN+RM CH++ KA+SK++ II++D FH FE G CSCRD
Sbjct: 473 AYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRD 532
Query: 281 FW 282
+W
Sbjct: 533 YW 534
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,312,045
Number of Sequences: 539616
Number of extensions: 4093423
Number of successful extensions: 12006
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 11025
Number of HSP's gapped (non-prelim): 504
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)